YPMT1.50c SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPMT1.50c SM00954 Region found in RelA / SpoT proteins YPO0002 SM00344 helix_turn_helix ASNC type YPO0004 SM00327 von Willebrand factor (vWF) type A domain YPO0005 SM00382 ATPases associated with a variety of cellular activities YPO0010 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO0010 SM00895 YPO0010 YPO0017 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPO0017 SM00474 3'-5' exonuclease YPO0017 SM00475 5'-3' exonuclease YPO0017 SM00482 DNA polymerase A domain YPO0018 SM01321 YPO0018 YPO0021 SM00729 Elongator protein 3, MiaB family, Radical SAM YPO0022 SM00382 ATPases associated with a variety of cellular activities YPO0022 SM00448 cheY-homologous receiver domain YPO0023 SM00091 PAS domain YPO0023 SM00387 Histidine kinase-like ATPases YPO0023 SM00388 His Kinase A (phosphoacceptor) domain YPO0024 SM01230 YPO0024 YPO0030 SM00382 ATPases associated with a variety of cellular activities YPO0036 SM00487 DEAD-like helicases superfamily YPO0036 SM00490 helicase superfamily c-terminal domain YPO0038 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPO0038 SM00954 Region found in RelA / SpoT proteins YPO0039 SM01409 YPO0039 YPO0040 SM00072 Guanylate kinase homologues. YPO0041 SM00532 Ligase N family YPO0052 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain YPO0052 SM01232 YPO0052 YPO0060 SM00829 Enoylreductase YPO0065 SM00450 Rhodanese Homology Domain YPO0070 SM00971 Serine acetyltransferase, N-terminal YPO0072 SM00342 helix_turn_helix, arabinose operon control protein YPO0073 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO0073 SM00387 Histidine kinase-like ATPases YPO0073 SM00388 His Kinase A (phosphoacceptor) domain YPO0074 SM00448 cheY-homologous receiver domain YPO0074 SM00862 Transcriptional regulatory protein, C terminal YPO0094 SM01321 YPO0094 YPO0096 SM00382 ATPases associated with a variety of cellular activities YPO0105 SM00382 ATPases associated with a variety of cellular activities YPO0105 SM01086 C-terminal, D2-small domain, of ClpB protein YPO0108 SM00354 helix_turn _helix lactose operon repressor YPO0110 SM00487 DEAD-like helicases superfamily YPO0110 SM00490 helicase superfamily c-terminal domain YPO0120 SM00420 helix_turn_helix, Deoxyribose operon repressor YPO0120 SM01134 YPO0120 YPO0122 SM00450 Rhodanese Homology Domain YPO0123 SM00421 helix_turn_helix, Lux Regulon YPO0133 SM00899 YPO0133 YPO0134 SM00316 Ribosomal protein S1-like RNA-binding domain YPO0134 SM00732 Likely ribonuclease with RNase H fold. YPO0136 SM00448 cheY-homologous receiver domain YPO0136 SM00862 Transcriptional regulatory protein, C terminal YPO0137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO0137 SM00387 Histidine kinase-like ATPases YPO0137 SM00388 His Kinase A (phosphoacceptor) domain YPO0140 SM00363 S4 RNA-binding domain YPO0165 SM00354 helix_turn _helix lactose operon repressor YPO0172 SM00382 ATPases associated with a variety of cellular activities YPO0175 SM00100 Cyclic nucleotide-monophosphate binding domain YPO0175 SM00419 helix_turn_helix, cAMP Regulatory protein YPO0182 SM00062 Bacterial periplasmic substrate-binding proteins YPO0183 SM00382 ATPases associated with a variety of cellular activities YPO0202 SM00838 Elongation factor G C-terminus YPO0202 SM00889 Elongation factor G, domain IV YPO0204 SM01321 YPO0204 YPO0209 SM01403 YPO0209 YPO0213 SM01382 YPO0213 YPO0213 SM01383 YPO0213 YPO0216 SM00322 K homology RNA-binding domain YPO0220 SM01374 YPO0220 YPO0221 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPO0233 SM00363 S4 RNA-binding domain YPO0233 SM01390 YPO0233 YPO0234 SM00662 RNA polymerases D YPO0236 SM00422 helix_turn_helix, mercury resistance YPO0248 SM00382 ATPases associated with a variety of cellular activities YPO0255 SM00421 helix_turn_helix, Lux Regulon YPO0255 SM00448 cheY-homologous receiver domain YPO0256 SM00387 Histidine kinase-like ATPases YPO0256 SM00388 His Kinase A (phosphoacceptor) domain YPO0256 SM00448 cheY-homologous receiver domain YPO0267 SM00382 ATPases associated with a variety of cellular activities YPO0279 SM00382 ATPases associated with a variety of cellular activities YPO0286 SM00729 Elongator protein 3, MiaB family, Radical SAM YPO0300 SM01321 YPO0300 YPO0308 SM00060 Fibronectin type 3 domain YPO0309 SM00869 Autotransporter beta-domain YPO0312 SM00563 Phosphate acyltransferases YPO0319 SM00829 Enoylreductase YPO0320 SM00382 ATPases associated with a variety of cellular activities YPO0321 SM01005 Alanine racemase, C-terminal domain YPO0328 SM01007 Class II Aldolase and Adducin N-terminal domain YPO0332 SM00342 helix_turn_helix, arabinose operon control protein YPO0333 SM00342 helix_turn_helix, arabinose operon control protein YPO0339 SM01276 YPO0339 YPO0344 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPO0350 SM00883 Chaperonin 10 Kd subunit YPO0354 SM00841 Elongation factor P, C-terminal YPO0354 SM01185 YPO0354 YPO0356 SM01321 YPO0356 YPO0366 SM00479 YPO0366 YPO0370 SM00257 Lysin motif YPO0370 SM00646 YPO0370 YPO0371 SM00853 MutL C terminal dimerisation domain YPO0371 SM01340 YPO0371 YPO0375 SM00244 prohibitin homologues YPO0376 SM00244 prohibitin homologues YPO0378 SM00788 Adenylosuccinate synthetase YPO0380 SM00316 Ribosomal protein S1-like RNA-binding domain YPO0380 SM00357 Cold shock protein domain YPO0380 SM00955 YPO0380 YPO0381 SM00967 RNA 2'-O ribose methyltransferase substrate binding YPO0385 SM00382 ATPases associated with a variety of cellular activities YPO0387 SM00382 ATPases associated with a variety of cellular activities YPO0401 SM00342 helix_turn_helix, arabinose operon control protein YPO0408 SM01133 YPO0408 YPO0412 SM00382 ATPases associated with a variety of cellular activities YPO0425 SM00267 diguanylate cyclase YPO0431 SM00749 bacterial OsmY and nodulation domain YPO0436 SM01133 YPO0436 YPO0443 SM00382 ATPases associated with a variety of cellular activities YPO0444 SM00530 Helix-turn-helix XRE-family like proteins YPO0449 SM00267 diguanylate cyclase YPO0451 SM00831 Cation transporter/ATPase, N-terminus YPO0455 SM00855 Phosphoglycerate mutase family YPO0456 SM00342 helix_turn_helix, arabinose operon control protein YPO0456 SM00871 Bacterial transcription activator, effector binding domain YPO0458 SM00448 cheY-homologous receiver domain YPO0458 SM00862 Transcriptional regulatory protein, C terminal YPO0464 SM00852 Probable molybdopterin binding domain YPO0469 SM00271 DnaJ molecular chaperone homology domain YPO0474 SM00904 Riboflavin kinase YPO0479 SM01321 YPO0479 YPO0481 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain YPO0482 SM00851 MGS-like domain YPO0482 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YPO0487 SM01321 YPO0487 YPO0492 SM00650 Ribosomal RNA adenine dimethylases YPO0496 SM00271 DnaJ molecular chaperone homology domain YPO0506 SM00382 ATPases associated with a variety of cellular activities YPO0506 SM01086 C-terminal, D2-small domain, of ClpB protein YPO0517 SM00487 DEAD-like helicases superfamily YPO0517 SM00490 helicase superfamily c-terminal domain YPO0518 SM00486 DNA polymerase type-B family YPO0520 SM00382 ATPases associated with a variety of cellular activities YPO0527 SM00382 ATPases associated with a variety of cellular activities YPO0532 SM01329 YPO0532 YPO0533 SM00917 LeuA allosteric (dimerisation) domain YPO0534 SM01321 YPO0534 YPO0541 SM01321 YPO0541 YPO0543 SM00354 helix_turn _helix lactose operon repressor YPO0559 SM00842 Cell division protein FtsA YPO0560 SM00864 Tubulin/FtsZ family, GTPase domain YPO0560 SM00865 Tubulin/FtsZ family, C-terminal domain YPO0564 SM00957 SecA DEAD-like domain YPO0564 SM00958 SecA preprotein cross-linking domain YPO0566 SM00382 ATPases associated with a variety of cellular activities YPO0576 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO0576 SM00895 YPO0576 YPO0581 SM00858 YPO0581 YPO0583 SM01321 YPO0583 YPO0587 SM00869 Autotransporter beta-domain YPO0592 SM00220 Serine/Threonine protein kinases, catalytic domain YPO0594 SM00327 von Willebrand factor (vWF) type A domain YPO0595 SM00327 von Willebrand factor (vWF) type A domain YPO0597 SM00327 von Willebrand factor (vWF) type A domain YPO0599 SM00912 haemagglutination activity domain YPO0606 SM00869 Autotransporter beta-domain YPO0609 SM00382 ATPases associated with a variety of cellular activities YPO0611 SM00354 helix_turn _helix lactose operon repressor YPO0616 SM01217 YPO0616 YPO0638 SM00382 ATPases associated with a variety of cellular activities YPO0644 SM00400 zinc finger YPO0644 SM00493 YPO0644 YPO0644 SM00766 DNA primase DnaG DnaB-binding YPO0647 SM01207 YPO0647 YPO0648 SM00905 Dihydroneopterin aldolase YPO0650 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPO0651 SM00287 Bacterial SH3 domain homologues YPO0652 SM01118 YPO0652 YPO0668 SM00387 Histidine kinase-like ATPases YPO0668 SM00433 TopoisomeraseII YPO0671 SM00434 DNA Topoisomerase IV YPO0672 SM00563 Phosphate acyltransferases YPO0679 SM00342 helix_turn_helix, arabinose operon control protein YPO0696 SM01321 YPO0696 YPO0697 SM01321 YPO0697 YPO0712 SM00382 ATPases associated with a variety of cellular activities YPO0717 SM00382 ATPases associated with a variety of cellular activities YPO0721 SM00858 YPO0721 YPO0726 SM01321 YPO0726 YPO0736 SM00862 Transcriptional regulatory protein, C terminal YPO0758 SM00354 helix_turn _helix lactose operon repressor YPO0770 SM00382 ATPases associated with a variety of cellular activities YPO0771 SM00382 ATPases associated with a variety of cellular activities YPO0779 SM00382 ATPases associated with a variety of cellular activities YPO0785 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. YPO0789 SM00927 DNA mismatch repair enzyme MutH YPO0793 SM00563 Phosphate acyltransferases YPO0795 SM00354 helix_turn _helix lactose operon repressor YPO0800 SM00849 Metallo-beta-lactamase superfamily YPO0802 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPO0802 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO0802 SM00319 Homologues of the ligand binding domain of Tar YPO0804 SM00862 Transcriptional regulatory protein, C terminal YPO0815 SM00382 ATPases associated with a variety of cellular activities YPO0819 SM00947 Carbonic anhydrase YPO0823 SM00869 Autotransporter beta-domain YPO0825 SM00382 ATPases associated with a variety of cellular activities YPO0831 SM00420 helix_turn_helix, Deoxyribose operon repressor YPO0831 SM01134 YPO0831 YPO0846 SM00354 helix_turn _helix lactose operon repressor YPO0849 SM00354 helix_turn _helix lactose operon repressor YPO0857 SM00382 ATPases associated with a variety of cellular activities YPO0858 SM00382 ATPases associated with a variety of cellular activities YPO0880 SM00778 Zinc-binding domain of primase-helicase YPO0880 SM00885 D5 N terminal like YPO0881 SM00530 Helix-turn-helix XRE-family like proteins YPO0883 SM00530 Helix-turn-helix XRE-family like proteins YPO0895 SM00387 Histidine kinase-like ATPases YPO0895 SM00388 His Kinase A (phosphoacceptor) domain YPO0896 SM00448 cheY-homologous receiver domain YPO0896 SM00862 Transcriptional regulatory protein, C terminal YPO0910 SM01011 Aminopeptidase P, N-terminal domain YPO0922 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPO0923 SM00382 ATPases associated with a variety of cellular activities YPO0925 SM01321 YPO0925 YPO0926 SM00861 Transketolase, pyrimidine binding domain YPO0932 SM00731 SprT homologues. YPO0937 SM00732 Likely ribonuclease with RNase H fold. YPO0940 SM00382 ATPases associated with a variety of cellular activities YPO0944 SM01152 YPO0944 YPO0946 SM00729 Elongator protein 3, MiaB family, Radical SAM YPO0952 SM00478 endonuclease III YPO0952 SM00525 YPO0952 YPO0958 SM00382 ATPases associated with a variety of cellular activities YPO0971 SM00382 ATPases associated with a variety of cellular activities YPO0971 SM01086 C-terminal, D2-small domain, of ClpB protein YPO0985 SM00421 helix_turn_helix, Lux Regulon YPO0991 SM01006 Siderophore biosynthesis protein domain YPO0998 SM00052 Putative diguanylate phosphodiesterase YPO0998 SM00091 PAS domain YPO0998 SM00267 diguanylate cyclase YPO1004 SM00869 Autotransporter beta-domain YPO1005 SM00364 Leucine-rich repeats, bacterial type YPO1006 SM00364 Leucine-rich repeats, bacterial type YPO1007 SM00364 Leucine-rich repeats, bacterial type YPO1007 SM00369 Leucine-rich repeats, typical (most populated) subfamily YPO1012 SM00823 Phosphopantetheine attachment site YPO1012 SM00825 Beta-ketoacyl synthase YPO1014 SM00382 ATPases associated with a variety of cellular activities YPO1023 SM00646 YPO1023 YPO1025 SM00925 MltA specific insert domain YPO1032 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YPO1032 SM00475 5'-3' exonuclease YPO1036 SM01321 YPO1036 YPO1042 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPO1051 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPO1053 SM00935 Outer membrane protein (OmpH-like) YPO1059 SM00481 DNA polymerase alpha chain like domain YPO1062 SM00977 TilS substrate C-terminal domain YPO1065 SM01322 YPO1065 YPO1073 SM00382 ATPases associated with a variety of cellular activities YPO1073 SM00930 YPO1073 YPO1078 SM00257 Lysin motif YPO1079 SM00849 Metallo-beta-lactamase superfamily YPO1082 SM00479 YPO1082 YPO1085 SM00382 ATPases associated with a variety of cellular activities YPO1090 SM00778 Zinc-binding domain of primase-helicase YPO1099 SM01321 YPO1099 YPO1113 SM00861 Transketolase, pyrimidine binding domain YPO1116 SM00881 CoA binding domain YPO1131 SM00382 ATPases associated with a variety of cellular activities YPO1133 SM00855 Phosphoglycerate mutase family YPO1142 SM00382 ATPases associated with a variety of cellular activities YPO1147 SM00382 ATPases associated with a variety of cellular activities YPO1151 SM00729 Elongator protein 3, MiaB family, Radical SAM YPO1151 SM00876 Biotin and Thiamin Synthesis associated domain YPO1155 SM00382 ATPases associated with a variety of cellular activities YPO1156 SM00487 DEAD-like helicases superfamily YPO1156 SM00490 helicase superfamily c-terminal domain YPO1159 SM00729 Elongator protein 3, MiaB family, Radical SAM YPO1164 SM01321 YPO1164 YPO1173 SM01321 YPO1173 YPO1178 SM01118 YPO1178 YPO1179 SM00507 HNH nucleases YPO1182 SM00382 ATPases associated with a variety of cellular activities YPO1191 SM00382 ATPases associated with a variety of cellular activities YPO1194 SM00450 Rhodanese Homology Domain YPO1198 SM00382 ATPases associated with a variety of cellular activities YPO1206 SM00487 DEAD-like helicases superfamily YPO1206 SM00488 YPO1206 YPO1206 SM00491 YPO1206 YPO1207 SM01060 YPO1207 YPO1210 SM00852 Probable molybdopterin binding domain YPO1216 SM00434 DNA Topoisomerase IV YPO1217 SM00387 Histidine kinase-like ATPases YPO1217 SM00388 His Kinase A (phosphoacceptor) domain YPO1217 SM00448 cheY-homologous receiver domain YPO1218 SM00421 helix_turn_helix, Lux Regulon YPO1218 SM00448 cheY-homologous receiver domain YPO1223 SM01321 YPO1223 YPO1229 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPO1229 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO1233 SM00530 Helix-turn-helix XRE-family like proteins YPO1236 SM01007 Class II Aldolase and Adducin N-terminal domain YPO1237 SM00420 helix_turn_helix, Deoxyribose operon repressor YPO1237 SM01134 YPO1237 YPO1263 SM01321 YPO1263 YPO1265 SM00487 DEAD-like helicases superfamily YPO1265 SM00490 helicase superfamily c-terminal domain YPO1266 SM00363 S4 RNA-binding domain YPO1270 SM00382 ATPases associated with a variety of cellular activities YPO1276 SM00014 Acid phosphatase homologues YPO1277 SM00833 Cobalamin synthesis protein cobW C-terminal domain YPO1279 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO1279 SM00895 YPO1279 YPO1284 SM00841 Elongation factor P, C-terminal YPO1284 SM01185 YPO1284 YPO1294 SM00382 ATPases associated with a variety of cellular activities YPO1301 SM00862 Transcriptional regulatory protein, C terminal YPO1306 SM00518 AP endonuclease family 2 YPO1312 SM00382 ATPases associated with a variety of cellular activities YPO1318 SM00382 ATPases associated with a variety of cellular activities YPO1318 SM00930 YPO1318 YPO1320 SM00936 Penicillin-binding protein 5, C-terminal domain YPO1322 SM00420 helix_turn_helix, Deoxyribose operon repressor YPO1322 SM01134 YPO1322 YPO1323 SM01133 YPO1323 YPO1324 SM00014 Acid phosphatase homologues YPO1332 SM00382 ATPases associated with a variety of cellular activities YPO1339 SM00382 ATPases associated with a variety of cellular activities YPO1342 SM00244 prohibitin homologues YPO1345 SM00382 ATPases associated with a variety of cellular activities YPO1351 SM00062 Bacterial periplasmic substrate-binding proteins YPO1351 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPO1352 SM00382 ATPases associated with a variety of cellular activities YPO1353 SM00830 Chorismate mutase type II YPO1365 SM00382 ATPases associated with a variety of cellular activities YPO1366 SM00357 Cold shock protein domain YPO1368 SM00382 ATPases associated with a variety of cellular activities YPO1368 SM01086 C-terminal, D2-small domain, of ClpB protein YPO1369 SM01321 YPO1369 YPO1370 SM00316 Ribosomal protein S1-like RNA-binding domain YPO1372 SM00382 ATPases associated with a variety of cellular activities YPO1373 SM00382 ATPases associated with a variety of cellular activities YPO1375 SM00344 helix_turn_helix ASNC type YPO1376 SM00843 YPO1376 YPO1378 SM00382 ATPases associated with a variety of cellular activities YPO1386 SM00870 YPO1386 YPO1392 SM00316 Ribosomal protein S1-like RNA-binding domain YPO1393 SM00411 bacterial (prokaryotic) histone like domain YPO1394 SM00849 Metallo-beta-lactamase superfamily YPO1395 SM00382 ATPases associated with a variety of cellular activities YPO1397 SM01150 YPO1397 YPO1398 SM00357 Cold shock protein domain YPO1406 SM01321 YPO1406 YPO1409 SM00849 Metallo-beta-lactamase superfamily YPO1418 SM00981 YPO1418 YPO1419 SM00382 ATPases associated with a variety of cellular activities YPO1424 SM01321 YPO1424 YPO1425a SM00825 Beta-ketoacyl synthase YPO1426 SM00382 ATPases associated with a variety of cellular activities YPO1434 SM01321 YPO1434 YPO1441 SM00851 MGS-like domain YPO1443 SM00881 CoA binding domain YPO1444 SM00992 Hemimethylated DNA-binding protein YccV like YPO1445 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YPO1455 SM00825 Beta-ketoacyl synthase YPO1463 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YPO1471 SM00382 ATPases associated with a variety of cellular activities YPO1471 SM01086 C-terminal, D2-small domain, of ClpB protein YPO1491 SM00382 ATPases associated with a variety of cellular activities YPO1495 SM00852 Probable molybdopterin binding domain YPO1497 SM00382 ATPases associated with a variety of cellular activities YPO1502 SM00829 Enoylreductase YPO1508 SM00382 ATPases associated with a variety of cellular activities YPO1511 SM00919 Malic enzyme, NAD binding domain YPO1511 SM01274 YPO1511 YPO1519 SM00382 ATPases associated with a variety of cellular activities YPO1521 SM01321 YPO1521 YPO1527 SM01091 Transporter associated domain YPO1531 SM01006 Siderophore biosynthesis protein domain YPO1533 SM00382 ATPases associated with a variety of cellular activities YPO1541 SM01350 YPO1541 YPO1562 SM00634 Bacterial Ig-like domain (group 1) YPO1567 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPO1576 SM00421 helix_turn_helix, Lux Regulon YPO1576 SM00448 cheY-homologous receiver domain YPO1590 SM00316 Ribosomal protein S1-like RNA-binding domain YPO1591 SM00363 S4 RNA-binding domain YPO1592 SM01321 YPO1592 YPO1598 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YPO1599 SM00822 YPO1599 YPO1601 SM00825 Beta-ketoacyl synthase YPO1602 SM01321 YPO1602 YPO1609 SM01321 YPO1609 YPO1622 SM00382 ATPases associated with a variety of cellular activities YPO1625 SM00487 DEAD-like helicases superfamily YPO1625 SM00490 helicase superfamily c-terminal domain YPO1625 SM00982 YPO1625 YPO1625 SM01058 CarD-like/TRCF domain YPO1627 SM00382 ATPases associated with a variety of cellular activities YPO1632 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. YPO1633 SM00387 Histidine kinase-like ATPases YPO1633 SM00388 His Kinase A (phosphoacceptor) domain YPO1634 SM00448 cheY-homologous receiver domain YPO1634 SM00862 Transcriptional regulatory protein, C terminal YPO1641 SM01329 YPO1641 YPO1642 SM00354 helix_turn _helix lactose operon repressor YPO1644 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPO1644 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPO1651 SM00344 helix_turn_helix ASNC type YPO1653 SM00829 Enoylreductase YPO1654 SM01038 Beta galactosidase small chain YPO1655 SM00357 Cold shock protein domain YPO1661 SM00831 Cation transporter/ATPase, N-terminus YPO1666 SM00073 Histidine Phosphotransfer domain YPO1666 SM00260 Two component signalling adaptor domain YPO1666 SM00387 Histidine kinase-like ATPases YPO1666 SM01231 YPO1666 YPO1667 SM00260 Two component signalling adaptor domain YPO1672 SM00869 Autotransporter beta-domain YPO1675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPO1675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO1675 SM00319 Homologues of the ligand binding domain of Tar YPO1678 SM00138 Methyltransferase, chemotaxis proteins YPO1679 SM00448 cheY-homologous receiver domain YPO1680 SM00448 cheY-homologous receiver domain YPO1683 SM00644 YPO1683 YPO1687 SM01005 Alanine racemase, C-terminal domain YPO1691 SM00382 ATPases associated with a variety of cellular activities YPO1693 SM01022 YPO1693 YPO1695 SM00972 Spore Coat Protein U domain YPO1698 SM00972 Spore Coat Protein U domain YPO1699 SM00972 Spore Coat Protein U domain YPO1700 SM00972 Spore Coat Protein U domain YPO1704 SM00945 ProQ/FINO family YPO1705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPO1705 SM00245 tail specific protease YPO1714 SM00346 helix_turn_helix isocitrate lyase regulation YPO1715 SM00644 YPO1715 YPO1720 SM00382 ATPases associated with a variety of cellular activities YPO1730 SM00382 ATPases associated with a variety of cellular activities YPO1734 SM00090 RIO-like kinase YPO1735 SM00382 ATPases associated with a variety of cellular activities YPO1737 SM00342 helix_turn_helix, arabinose operon control protein YPO1746 SM00357 Cold shock protein domain YPO1751 SM00382 ATPases associated with a variety of cellular activities YPO1751a SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPO1751a SM00091 PAS domain YPO1751a SM00267 diguanylate cyclase YPO1760 SM00347 helix_turn_helix multiple antibiotic resistance protein YPO1770 SM00903 Flavin reductase like domain YPO1776 SM00487 DEAD-like helicases superfamily YPO1776 SM00490 helicase superfamily c-terminal domain YPO1778 SM01022 YPO1778 YPO1794 SM01321 YPO1794 YPO1798 SM00858 YPO1798 YPO1807 SM00047 Lysozyme subfamily 2 YPO1811 SM01007 Class II Aldolase and Adducin N-terminal domain YPO1814 SM00382 ATPases associated with a variety of cellular activities YPO1827 SM00382 ATPases associated with a variety of cellular activities YPO1834 SM00478 endonuclease III YPO1837 SM00342 helix_turn_helix, arabinose operon control protein YPO1846 SM00062 Bacterial periplasmic substrate-binding proteins YPO1846 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPO1848 SM00382 ATPases associated with a variety of cellular activities YPO1865 SM00421 helix_turn_helix, Lux Regulon YPO1865 SM00448 cheY-homologous receiver domain YPO1866 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPO1866 SM00465 GIY-YIG type nucleases (URI domain) YPO1890 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO1890 SM00866 YPO1890 YPO1901 SM00382 ATPases associated with a variety of cellular activities YPO1910 SM00822 YPO1910 YPO1910 SM00823 Phosphopantetheine attachment site YPO1910 SM00824 Thioesterase YPO1910 SM00825 Beta-ketoacyl synthase YPO1910 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YPO1911 SM00823 Phosphopantetheine attachment site YPO1912 SM00342 helix_turn_helix, arabinose operon control protein YPO1913 SM00382 ATPases associated with a variety of cellular activities YPO1914 SM00382 ATPases associated with a variety of cellular activities YPO1925 SM00421 helix_turn_helix, Lux Regulon YPO1925 SM00448 cheY-homologous receiver domain YPO1938 SM00420 helix_turn_helix, Deoxyribose operon repressor YPO1938 SM01134 YPO1938 YPO1946 SM00382 ATPases associated with a variety of cellular activities YPO1959 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO1959 SM00387 Histidine kinase-like ATPases YPO1960 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO1969 SM00382 ATPases associated with a variety of cellular activities YPO1973 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO1973 SM00866 YPO1973 YPO1989 SM00671 Sel1-like repeats. YPO1990 SM00671 Sel1-like repeats. YPO2000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO2000 SM00387 Histidine kinase-like ATPases YPO2000 SM00388 His Kinase A (phosphoacceptor) domain YPO2001 SM00448 cheY-homologous receiver domain YPO2001 SM00862 Transcriptional regulatory protein, C terminal YPO2008 SM00450 Rhodanese Homology Domain YPO2013 SM01400 YPO2013 YPO2017 SM00937 YPO2017 YPO2023 SM01321 YPO2023 YPO2025 SM00382 ATPases associated with a variety of cellular activities YPO2033 SM01321 YPO2033 YPO2037 SM00481 DNA polymerase alpha chain like domain YPO2045 SM00912 haemagglutination activity domain YPO2046 SM00836 DALR anticodon binding domain YPO2046 SM01016 Arginyl tRNA synthetase N terminal dom YPO2057 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPO2058 SM00382 ATPases associated with a variety of cellular activities YPO2060 SM00382 ATPases associated with a variety of cellular activities YPO2062 SM00257 Lysin motif YPO2071 SM00487 DEAD-like helicases superfamily YPO2071 SM00491 YPO2071 YPO2075 SM00341 Helicase and RNase D C-terminal YPO2075 SM00474 3'-5' exonuclease YPO2086 SM00382 ATPases associated with a variety of cellular activities YPO2093 SM01040 BRO family, N-terminal domain YPO2110 SM00635 Bacterial Ig-like domain 2 YPO2116 SM00635 Bacterial Ig-like domain 2 YPO2121 SM01321 YPO2121 YPO2123 SM00232 JAB/MPN domain YPO2126 SM01040 BRO family, N-terminal domain YPO2131 SM00060 Fibronectin type 3 domain YPO2144 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO2153 SM00763 PrkA AAA domain YPO2157 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPO2161 SM00870 YPO2161 YPO2165 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YPO2165 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YPO2165 SM00493 YPO2165 YPO2173 SM00448 cheY-homologous receiver domain YPO2174 SM00984 UDP binding domain YPO2175 SM00528 Domain in histone-like proteins of HNS family YPO2177 SM00382 ATPases associated with a variety of cellular activities YPO2185 SM00382 ATPases associated with a variety of cellular activities YPO2186 SM00382 ATPases associated with a variety of cellular activities YPO2188 SM00155 Phospholipase D. Active site motifs. YPO2202 SM00749 bacterial OsmY and nodulation domain YPO2211 SM00481 DNA polymerase alpha chain like domain YPO2213 SM00363 S4 RNA-binding domain YPO2215 SM00822 YPO2215 YPO2218 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YPO2218 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YPO2218 SM00493 YPO2218 YPO2223 SM00014 Acid phosphatase homologues YPO2225 SM00028 Tetratricopeptide repeats YPO2227 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family YPO2230 SM01007 Class II Aldolase and Adducin N-terminal domain YPO2235 SM00357 Cold shock protein domain YPO2235 SM00955 YPO2235 YPO2239 SM00478 endonuclease III YPO2239 SM00525 YPO2239 YPO2241 SM00900 YPO2241 YPO2243 SM00342 helix_turn_helix, arabinose operon control protein YPO2252 SM00382 ATPases associated with a variety of cellular activities YPO2256 SM00382 ATPases associated with a variety of cellular activities YPO2258 SM00342 helix_turn_helix, arabinose operon control protein YPO2273 SM00530 Helix-turn-helix XRE-family like proteins YPO2283 SM00354 helix_turn _helix lactose operon repressor YPO2298 SM00098 Alkaline phosphatase homologues YPO2300 SM00100 Cyclic nucleotide-monophosphate binding domain YPO2300 SM00419 helix_turn_helix, cAMP Regulatory protein YPO2303 SM01002 Alanine dehydrogenase/PNT, C-terminal domain YPO2303 SM01003 Alanine dehydrogenase/PNT, N-terminal domain YPO2308 SM00448 cheY-homologous receiver domain YPO2308 SM00862 Transcriptional regulatory protein, C terminal YPO2309 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO2309 SM00387 Histidine kinase-like ATPases YPO2309 SM00388 His Kinase A (phosphoacceptor) domain YPO2311 SM01321 YPO2311 YPO2315 SM00867 YceI-like domain YPO2319 SM00020 Trypsin-like serine protease YPO2320 SM00530 Helix-turn-helix XRE-family like proteins YPO2322 SM00382 ATPases associated with a variety of cellular activities YPO2322 SM00487 DEAD-like helicases superfamily YPO2322 SM00490 helicase superfamily c-terminal domain YPO2322 SM00847 Helicase associated domain (HA2) Add an annotation YPO2334 SM00890 Domain of unknown function YPO2337 SM00422 helix_turn_helix, mercury resistance YPO2341 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPO2343 SM01321 YPO2343 YPO2344 SM00091 PAS domain YPO2344 SM00382 ATPases associated with a variety of cellular activities YPO2346 SM00953 YPO2346 YPO2352 SM00382 ATPases associated with a variety of cellular activities YPO2353 SM01321 YPO2353 YPO2358 SM00382 ATPases associated with a variety of cellular activities YPO2359 SM00382 ATPases associated with a variety of cellular activities YPO2364 SM00382 ATPases associated with a variety of cellular activities YPO2369 SM00363 S4 RNA-binding domain YPO2374 SM00347 helix_turn_helix multiple antibiotic resistance protein YPO2382 SM00479 YPO2382 YPO2387 SM00354 helix_turn _helix lactose operon repressor YPO2395 SM01321 YPO2395 YPO2397 SM00382 ATPases associated with a variety of cellular activities YPO2402 SM00382 ATPases associated with a variety of cellular activities YPO2423 SM00382 ATPases associated with a variety of cellular activities YPO2427 SM00411 bacterial (prokaryotic) histone like domain YPO2428 SM00873 B3/4 domain YPO2428 SM00874 tRNA synthetase B5 domain YPO2428 SM00896 Ferredoxin-fold anticodon binding domain YPO2433 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YPO2440 SM00382 ATPases associated with a variety of cellular activities YPO2449 SM00421 helix_turn_helix, Lux Regulon YPO2451 SM00450 Rhodanese Homology Domain YPO2457 SM00421 helix_turn_helix, Lux Regulon YPO2478 SM00354 helix_turn _helix lactose operon repressor YPO2480 SM00382 ATPases associated with a variety of cellular activities YPO2490 SM00912 haemagglutination activity domain YPO2496 SM01329 YPO2496 YPO2498 SM00354 helix_turn _helix lactose operon repressor YPO2500 SM00382 ATPases associated with a variety of cellular activities YPO2502 SM00829 Enoylreductase YPO2512 SM00062 Bacterial periplasmic substrate-binding proteins YPO2512 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YPO2514 SM00382 ATPases associated with a variety of cellular activities YPO2515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YPO2515 SM00091 PAS domain YPO2515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPO2517 SM00382 ATPases associated with a variety of cellular activities YPO2524 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YPO2537 SM00354 helix_turn _helix lactose operon repressor YPO2550 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPO2550 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YPO2551 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YPO2559 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPO2568 SM00354 helix_turn _helix lactose operon repressor YPO2573 SM01359 YPO2573 YPO2573 SM01360 YPO2573 YPO2582 SM00382 ATPases associated with a variety of cellular activities YPO2588 SM00382 ATPases associated with a variety of cellular activities YPO2593 SM00421 helix_turn_helix, Lux Regulon YPO2595 SM00357 Cold shock protein domain YPO2598 SM00729 Elongator protein 3, MiaB family, Radical SAM YPO2601 SM00936 Penicillin-binding protein 5, C-terminal domain YPO2612 SM00382 ATPases associated with a variety of cellular activities YPO2615 SM00062 Bacterial periplasmic substrate-binding proteins YPO2617 SM00116 Domain in cystathionine beta-synthase and other proteins. YPO2617 SM01091 Transporter associated domain YPO2620 SM00729 Elongator protein 3, MiaB family, Radical SAM YPO2629 SM01321 YPO2629 YPO2642 SM00382 ATPases associated with a variety of cellular activities YPO2647 SM00382 ATPases associated with a variety of cellular activities YPO2659 SM00357 Cold shock protein domain YPO2663 SM00382 ATPases associated with a variety of cellular activities YPO2664 SM00382 ATPases associated with a variety of cellular activities YPO2668 SM00988 UreE urease accessory protein, N-terminal domain YPO2681 SM00342 helix_turn_helix, arabinose operon control protein YPO2688 SM00448 cheY-homologous receiver domain YPO2688 SM00862 Transcriptional regulatory protein, C terminal YPO2689 SM00387 Histidine kinase-like ATPases YPO2689 SM00388 His Kinase A (phosphoacceptor) domain YPO2699 SM00797 Allophanate hydrolase subunit 2 YPO2704 SM00986 Uracil DNA glycosylase superfamily YPO2704 SM00987 UreE urease accessory protein, C-terminal domain YPO2707 SM00248 ankyrin repeats YPO2708 SM00487 DEAD-like helicases superfamily YPO2708 SM00490 helicase superfamily c-terminal domain YPO2718 SM00358 Double-stranded RNA binding motif YPO2718 SM00535 Ribonuclease III family YPO2722 SM00382 ATPases associated with a variety of cellular activities YPO2734 SM00382 ATPases associated with a variety of cellular activities YPO2748 SM00855 Phosphoglycerate mutase family YPO2749 SM00463 Small MutS-related domain YPO2757 SM00825 Beta-ketoacyl synthase YPO2762 SM00342 helix_turn_helix, arabinose operon control protein YPO2764 SM01321 YPO2764 YPO2765 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPO2774 SM00062 Bacterial periplasmic substrate-binding proteins YPO2777 SM00382 ATPases associated with a variety of cellular activities YPO2779 SM00052 Putative diguanylate phosphodiesterase YPO2796 SM00869 Autotransporter beta-domain YPO2803 SM01217 YPO2803 YPO2809 SM00382 ATPases associated with a variety of cellular activities YPO2813 SM00195 Dual specificity phosphatase, catalytic domain YPO2813 SM00404 Protein tyrosine phosphatase, catalytic domain motif YPO2815 SM00563 Phosphate acyltransferases YPO2826 SM01321 YPO2826 YPO2833 SM00382 ATPases associated with a variety of cellular activities YPO2839 SM00924 MgtE intracellular N domain YPO2845 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO2846 SM00382 ATPases associated with a variety of cellular activities YPO2853 SM00448 cheY-homologous receiver domain YPO2853 SM00862 Transcriptional regulatory protein, C terminal YPO2856 SM00046 Diacylglycerol kinase catalytic domain (presumed) YPO2869 SM01321 YPO2869 YPO2871 SM00116 Domain in cystathionine beta-synthase and other proteins. YPO2871 SM01240 YPO2871 YPO2876 SM00564 beta-propeller repeat YPO2880 SM00530 Helix-turn-helix XRE-family like proteins YPO2881 SM00028 Tetratricopeptide repeats YPO2883 SM00562 YPO2883 YPO2884 SM00247 Beta/gamma crystallins YPO2886 SM00869 Autotransporter beta-domain YPO2893 SM00271 DnaJ molecular chaperone homology domain YPO2900 SM01321 YPO2900 YPO2911 SM00938 Nitrogen regulatory protein P-II YPO2914 SM00382 ATPases associated with a variety of cellular activities YPO2914 SM00448 cheY-homologous receiver domain YPO2916 SM00387 Histidine kinase-like ATPases YPO2916 SM00388 His Kinase A (phosphoacceptor) domain YPO2917 SM01321 YPO2917 YPO2921 SM01211 YPO2921 YPO2922 SM00062 Bacterial periplasmic substrate-binding proteins YPO2928 SM01321 YPO2928 YPO2931 SM00382 ATPases associated with a variety of cellular activities YPO2946 SM00382 ATPases associated with a variety of cellular activities YPO2946 SM01086 C-terminal, D2-small domain, of ClpB protein YPO2955 SM00421 helix_turn_helix, Lux Regulon YPO2960 SM00382 ATPases associated with a variety of cellular activities YPO2965 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPO2985 SM01321 YPO2985 YPO2989 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YPO2989 SM00292 breast cancer carboxy-terminal domain YPO2989 SM00532 Ligase N family YPO2990 SM00771 ZipA, C-terminal domain (FtsZ-binding) YPO2996 SM01321 YPO2996 YPO2997 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO2997 SM00387 Histidine kinase-like ATPases YPO2997 SM00388 His Kinase A (phosphoacceptor) domain YPO2998 SM00448 cheY-homologous receiver domain YPO2998 SM00862 Transcriptional regulatory protein, C terminal YPO3000 SM00382 ATPases associated with a variety of cellular activities YPO3001 SM00450 Rhodanese Homology Domain YPO3007 SM00327 von Willebrand factor (vWF) type A domain YPO3008 SM00387 Histidine kinase-like ATPases YPO3008 SM00388 His Kinase A (phosphoacceptor) domain YPO3009 SM00448 cheY-homologous receiver domain YPO3009 SM00862 Transcriptional regulatory protein, C terminal YPO3012 SM00382 ATPases associated with a variety of cellular activities YPO3024 SM01130 YPO3024 YPO3028 SM00869 Autotransporter beta-domain YPO3034 SM00919 Malic enzyme, NAD binding domain YPO3034 SM01274 YPO3034 YPO3038 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPO3041 SM00421 helix_turn_helix, Lux Regulon YPO3041 SM00448 cheY-homologous receiver domain YPO3048 SM00382 ATPases associated with a variety of cellular activities YPO3060 SM01321 YPO3060 YPO3062 SM01130 YPO3062 YPO3072 SM01321 YPO3072 YPO3073 SM00840 YPO3073 YPO3076 SM01001 AIR carboxylase YPO3079 SM00382 ATPases associated with a variety of cellular activities YPO3081 SM00822 YPO3081 YPO3083 SM00244 prohibitin homologues YPO3085 SM00422 helix_turn_helix, mercury resistance YPO3119 SM00387 Histidine kinase-like ATPases YPO3120 SM00493 YPO3120 YPO3122 SM00382 ATPases associated with a variety of cellular activities YPO3125 SM00382 ATPases associated with a variety of cellular activities YPO3143 SM00938 Nitrogen regulatory protein P-II YPO3144 SM00382 ATPases associated with a variety of cellular activities YPO3145 SM00382 ATPases associated with a variety of cellular activities YPO3146 SM00344 helix_turn_helix ASNC type YPO3154 SM00411 bacterial (prokaryotic) histone like domain YPO3155 SM00382 ATPases associated with a variety of cellular activities YPO3155 SM00464 Found in ATP-dependent protease La (LON) YPO3156 SM00382 ATPases associated with a variety of cellular activities YPO3156 SM00994 ClpX C4-type zinc finger YPO3156 SM01086 C-terminal, D2-small domain, of ClpB protein YPO3173 SM00981 YPO3173 YPO3177 SM00861 Transketolase, pyrimidine binding domain YPO3178 SM01321 YPO3178 YPO3187 SM01321 YPO3187 YPO3190 SM01323 YPO3190 YPO3195 SM01321 YPO3195 YPO3200 SM00642 Alpha-amylase domain YPO3204 SM00091 PAS domain YPO3204 SM00387 Histidine kinase-like ATPases YPO3204 SM00388 His Kinase A (phosphoacceptor) domain YPO3205 SM00448 cheY-homologous receiver domain YPO3205 SM00862 Transcriptional regulatory protein, C terminal YPO3208 SM00382 ATPases associated with a variety of cellular activities YPO3222 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YPO3227 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins YPO3238 SM00900 YPO3238 YPO3247 SM00710 Parallel beta-helix repeats YPO3247 SM00912 haemagglutination activity domain YPO3252 SM00382 ATPases associated with a variety of cellular activities YPO3254 SM00382 ATPases associated with a variety of cellular activities YPO3257 SM00062 Bacterial periplasmic substrate-binding proteins YPO3266 SM00347 helix_turn_helix multiple antibiotic resistance protein YPO3269 SM00967 RNA 2'-O ribose methyltransferase substrate binding YPO3271 SM01144 YPO3271 YPO3272 SM00881 CoA binding domain YPO3273 SM00155 Phospholipase D. Active site motifs. YPO3275 SM00382 ATPases associated with a variety of cellular activities YPO3275 SM01086 C-terminal, D2-small domain, of ClpB protein YPO3277 SM00363 S4 RNA-binding domain YPO3280 SM01321 YPO3280 YPO3283 SM00382 ATPases associated with a variety of cellular activities YPO3285 SM00830 Chorismate mutase type II YPO3287 SM00448 cheY-homologous receiver domain YPO3287 SM00850 LytTr DNA-binding domain YPO3291 SM01321 YPO3291 YPO3296 SM00382 ATPases associated with a variety of cellular activities YPO3296 SM00962 SRP54-type protein, GTPase domain YPO3296 SM00963 SRP54-type protein, helical bundle domain YPO3298 SM01091 Transporter associated domain YPO3299 SM01321 YPO3299 YPO3305 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YPO3307 SM00382 ATPases associated with a variety of cellular activities YPO3313 SM00861 Transketolase, pyrimidine binding domain YPO3316 SM00382 ATPases associated with a variety of cellular activities YPO3325 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YPO3326 SM01007 Class II Aldolase and Adducin N-terminal domain YPO3327 SM00420 helix_turn_helix, Deoxyribose operon repressor YPO3327 SM01134 YPO3327 YPO3329 SM01321 YPO3329 YPO3330 SM00382 ATPases associated with a variety of cellular activities YPO3342 SM01235 YPO3342 YPO3343 SM00062 Bacterial periplasmic substrate-binding proteins YPO3346 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor YPO3349 SM01120 YPO3349 YPO3352 SM00829 Enoylreductase YPO3354 SM00533 DNA-binding domain of DNA mismatch repair MUTS family YPO3354 SM00534 ATPase domain of DNA mismatch repair MUTS family YPO3356 SM00257 Lysin motif YPO3376 SM01192 YPO3376 YPO3376 SM01193 YPO3376 YPO3380 SM00954 Region found in RelA / SpoT proteins YPO3381 SM00073 Histidine Phosphotransfer domain YPO3381 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO3381 SM00387 Histidine kinase-like ATPases YPO3381 SM00388 His Kinase A (phosphoacceptor) domain YPO3381 SM00448 cheY-homologous receiver domain YPO3382 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPO3383 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YPO3392 SM00382 ATPases associated with a variety of cellular activities YPO3394 SM00487 DEAD-like helicases superfamily YPO3394 SM00490 helicase superfamily c-terminal domain YPO3394 SM00847 Helicase associated domain (HA2) Add an annotation YPO3406 SM00382 ATPases associated with a variety of cellular activities YPO3407 SM00947 Carbonic anhydrase YPO3416 SM01321 YPO3416 YPO3420 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO3420 SM00895 YPO3420 YPO3423 SM00644 YPO3423 YPO3428 SM01240 YPO3428 YPO3433 SM01321 YPO3433 YPO3435 SM00382 ATPases associated with a variety of cellular activities YPO3452 SM00382 ATPases associated with a variety of cellular activities YPO3453 SM00382 ATPases associated with a variety of cellular activities YPO3456 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO3456 SM00866 YPO3456 YPO3461 SM00382 ATPases associated with a variety of cellular activities YPO3462 SM00382 ATPases associated with a variety of cellular activities YPO3464 SM00072 Guanylate kinase homologues. YPO3465 SM00849 Metallo-beta-lactamase superfamily YPO3466 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPO3469 SM00382 ATPases associated with a variety of cellular activities YPO3485 SM00530 Helix-turn-helix XRE-family like proteins YPO3488 SM00487 DEAD-like helicases superfamily YPO3488 SM00490 helicase superfamily c-terminal domain YPO3489 SM00028 Tetratricopeptide repeats YPO3490 SM00316 Ribosomal protein S1-like RNA-binding domain YPO3490 SM00322 K homology RNA-binding domain YPO3493 SM01387 YPO3493 YPO3497 SM00316 Ribosomal protein S1-like RNA-binding domain YPO3497 SM00322 K homology RNA-binding domain YPO3502 SM00382 ATPases associated with a variety of cellular activities YPO3504 SM01103 YPO3504 YPO3507 SM00448 cheY-homologous receiver domain YPO3507 SM00862 Transcriptional regulatory protein, C terminal YPO3508 SM00387 Histidine kinase-like ATPases YPO3508 SM00388 His Kinase A (phosphoacceptor) domain YPO3526 SM00116 Domain in cystathionine beta-synthase and other proteins. YPO3526 SM01091 Transporter associated domain YPO3535 SM01321 YPO3535 YPO3543 SM00382 ATPases associated with a variety of cellular activities YPO3551 SM00749 bacterial OsmY and nodulation domain YPO3555 SM00073 Histidine Phosphotransfer domain YPO3555 SM00091 PAS domain YPO3555 SM00387 Histidine kinase-like ATPases YPO3555 SM00388 His Kinase A (phosphoacceptor) domain YPO3555 SM00448 cheY-homologous receiver domain YPO3556 SM00729 Elongator protein 3, MiaB family, Radical SAM YPO3566 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPO3567 SM01321 YPO3567 YPO3568 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YPO3575 SM00382 ATPases associated with a variety of cellular activities YPO3577 SM00116 Domain in cystathionine beta-synthase and other proteins. YPO3581 SM00382 ATPases associated with a variety of cellular activities YPO3592 SM00382 ATPases associated with a variety of cellular activities YPO3599 SM00382 ATPases associated with a variety of cellular activities YPO3599 SM01086 C-terminal, D2-small domain, of ClpB protein YPO3610 SM00860 SMI1 / KNR4 family YPO3612 SM00530 Helix-turn-helix XRE-family like proteins YPO3619 SM00342 helix_turn_helix, arabinose operon control protein YPO3622 SM01133 YPO3622 YPO3624 SM00062 Bacterial periplasmic substrate-binding proteins YPO3627 SM00382 ATPases associated with a variety of cellular activities YPO3634 SM00382 ATPases associated with a variety of cellular activities YPO3642 SM01321 YPO3642 YPO3643 SM00357 Cold shock protein domain YPO3644 SM00357 Cold shock protein domain YPO3647 SM00849 Metallo-beta-lactamase superfamily YPO3651 SM00345 helix_turn_helix gluconate operon transcriptional repressor YPO3651 SM00895 YPO3651 YPO3658 SM00878 Biotin carboxylase C-terminal domain YPO3663 SM00829 Enoylreductase YPO3664 SM00052 Putative diguanylate phosphodiesterase YPO3664 SM00267 diguanylate cyclase YPO3669 SM00316 Ribosomal protein S1-like RNA-binding domain YPO3696 SM00642 Alpha-amylase domain YPO3698 SM00354 helix_turn _helix lactose operon repressor YPO3700 SM00382 ATPases associated with a variety of cellular activities YPO3712 SM00382 ATPases associated with a variety of cellular activities YPO3721 SM00912 haemagglutination activity domain YPO3722 SM01018 B12 binding domain YPO3728 SM00798 AICARFT/IMPCHase bienzyme YPO3728 SM00851 MGS-like domain YPO3729 SM01209 YPO3729 YPO3729 SM01210 YPO3729 YPO3731 SM00411 bacterial (prokaryotic) histone like domain YPO3743 SM00876 Biotin and Thiamin Synthesis associated domain YPO3745 SM01321 YPO3745 YPO3746 SM00663 RNA polymerase I subunit A N-terminus YPO3751 SM00649 Ribosomal protein L11/L12 YPO3752 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YPO3752 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPO3755 SM00382 ATPases associated with a variety of cellular activities YPO3764 SM01321 YPO3764 YPO3770 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YPO3770 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YPO3771 SM01004 Delta-aminolevulinic acid dehydratase YPO3773 SM00382 ATPases associated with a variety of cellular activities YPO3793 SM00382 ATPases associated with a variety of cellular activities YPO3804 SM00382 ATPases associated with a variety of cellular activities YPO3805 SM00382 ATPases associated with a variety of cellular activities YPO3810 SM01321 YPO3810 YPO3813 SM00382 ATPases associated with a variety of cellular activities YPO3814 SM00382 ATPases associated with a variety of cellular activities YPO3814 SM00962 SRP54-type protein, GTPase domain YPO3814 SM00963 SRP54-type protein, helical bundle domain YPO3833 SM00341 Helicase and RNase D C-terminal YPO3833 SM00487 DEAD-like helicases superfamily YPO3833 SM00490 helicase superfamily c-terminal domain YPO3833 SM00956 YPO3833 YPO3847 SM01219 YPO3847 YPO3853 SM01321 YPO3853 YPO3863 SM00984 UDP binding domain YPO3867 SM00357 Cold shock protein domain YPO3867 SM00382 ATPases associated with a variety of cellular activities YPO3867 SM00959 Rho termination factor, N-terminal domain YPO3869 SM00487 DEAD-like helicases superfamily YPO3869 SM00490 helicase superfamily c-terminal domain YPO3902 SM00382 ATPases associated with a variety of cellular activities YPO3907 SM00382 ATPases associated with a variety of cellular activities YPO3920 SM00382 ATPases associated with a variety of cellular activities YPO3927 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPO3941 SM00642 Alpha-amylase domain YPO3942 SM00642 Alpha-amylase domain YPO3944 SM00257 Lysin motif YPO3944 SM00634 Bacterial Ig-like domain (group 1) YPO3949 SM00859 Semialdehyde dehydrogenase, NAD binding domain YPO3955 SM00354 helix_turn _helix lactose operon repressor YPO3958 SM00448 cheY-homologous receiver domain YPO3958 SM00862 Transcriptional regulatory protein, C terminal YPO3964 SM00382 ATPases associated with a variety of cellular activities YPO3965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO3965 SM00387 Histidine kinase-like ATPases YPO3965 SM00388 His Kinase A (phosphoacceptor) domain YPO3965 SM00448 cheY-homologous receiver domain YPO3968 SM01321 YPO3968 YPO3971 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YPO3973 SM00235 Zinc-dependent metalloprotease YPO3984 SM00869 Autotransporter beta-domain YPO3988 SM00052 Putative diguanylate phosphodiesterase YPO3996 SM00052 Putative diguanylate phosphodiesterase YPO3996 SM00267 diguanylate cyclase YPO3999 SM00382 ATPases associated with a variety of cellular activities YPO4000 SM00382 ATPases associated with a variety of cellular activities YPO4006 SM00912 haemagglutination activity domain YPO4009 SM00382 ATPases associated with a variety of cellular activities YPO4012 SM00421 helix_turn_helix, Lux Regulon YPO4012 SM00448 cheY-homologous receiver domain YPO4025 SM00382 ATPases associated with a variety of cellular activities YPO4028 SM00530 Helix-turn-helix XRE-family like proteins YPO4034 SM00342 helix_turn_helix, arabinose operon control protein YPO4036 SM00382 ATPases associated with a variety of cellular activities YPO4062 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YPO4062 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YPO4062 SM01358 YPO4062 YPO4080 SM00642 Alpha-amylase domain YPO4094 SM00387 Histidine kinase-like ATPases YPO4094 SM00433 TopoisomeraseII YPO4096 SM00480 DNA polymerase III beta subunit YPO4097 SM00382 ATPases associated with a variety of cellular activities YPO4097 SM00760 Bacterial dnaA protein helix-turn-helix domain YPO4111 SM00062 Bacterial periplasmic substrate-binding proteins YPO4114 SM00382 ATPases associated with a variety of cellular activities YPO4121 SM00382 ATPases associated with a variety of cellular activities YPO4130 SM01228 YPO4130 YPO828a SM01321 YPO828a