YPO0520 854ddb81ce20386fc4be311ace396eb2 227 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 201 5.0E-98 T 22-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 YPO0520 854ddb81ce20386fc4be311ace396eb2 227 SUPERFAMILY SSF52540 8 211 6.36E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0520 854ddb81ce20386fc4be311ace396eb2 227 PANTHER PTHR24220:SF439 10 210 1.3E-105 T 22-04-2016 YPO0520 854ddb81ce20386fc4be311ace396eb2 227 SMART SM00382 15 200 1.1E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0520 854ddb81ce20386fc4be311ace396eb2 227 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0520 854ddb81ce20386fc4be311ace396eb2 227 Gene3D G3DSA:3.40.50.300 10 214 1.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0520 854ddb81ce20386fc4be311ace396eb2 227 PANTHER PTHR24220 10 210 1.3E-105 T 22-04-2016 YPO0520 854ddb81ce20386fc4be311ace396eb2 227 Pfam PF00005 ABC transporter 10 148 2.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1809 764d07677dd794baaab0a626a1327593 337 SUPERFAMILY SSF64518 13 335 2.75E-59 T 22-04-2016 YPO1809 764d07677dd794baaab0a626a1327593 337 PANTHER PTHR30244:SF5 13 336 1.3E-101 T 22-04-2016 YPO1809 764d07677dd794baaab0a626a1327593 337 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 13 209 1.2E-72 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 YPO1809 764d07677dd794baaab0a626a1327593 337 Gene3D G3DSA:1.20.1330.10 89 179 5.1E-19 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO1809 764d07677dd794baaab0a626a1327593 337 Gene3D G3DSA:1.20.1330.10 241 279 5.1E-19 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO1809 764d07677dd794baaab0a626a1327593 337 Pfam PF00669 Bacterial flagellin N-terminal helical region 15 150 6.1E-24 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO1809 764d07677dd794baaab0a626a1327593 337 PANTHER PTHR30244 13 336 1.3E-101 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.192 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.0E-78 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 1303 1384 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.5E-89 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.5E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 963 1157 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 6.5E-27 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 SMART SM00663 235 514 1.1E-184 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 1303 1384 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 1177 1262 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.8E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376 1177 1262 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.425 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 PANTHER PTHR19376:SF32 963 1157 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:2.40.40.20 417 489 2.8E-37 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:2.40.40.20 349 376 2.8E-37 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 SUPERFAMILY SSF64484 1133 1364 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO3746 5f2dd5b26b67450b5f6388b90c0d917c 1406 Gene3D G3DSA:2.40.50.100 1156 1209 4.6E-5 T 22-04-2016 YPO3189 0ba74f5232f7522de32089001bf317e0 615 Gene3D G3DSA:1.20.1640.10 440 608 5.7E-24 T 22-04-2016 YPO3189 0ba74f5232f7522de32089001bf317e0 615 PANTHER PTHR30081:SF1 1 173 5.9E-242 T 22-04-2016 YPO3189 0ba74f5232f7522de32089001bf317e0 615 PANTHER PTHR30081:SF1 313 613 5.9E-242 T 22-04-2016 YPO3189 0ba74f5232f7522de32089001bf317e0 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 2.1E-151 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YPO3189 0ba74f5232f7522de32089001bf317e0 615 SUPERFAMILY SSF82866 410 606 1.15E-41 T 22-04-2016 YPO3189 0ba74f5232f7522de32089001bf317e0 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 4.4E-37 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain YPO3189 0ba74f5232f7522de32089001bf317e0 615 Pfam PF07549 SecD/SecF GG Motif 120 140 4.2E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPO3189 0ba74f5232f7522de32089001bf317e0 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 614 47.887 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YPO3189 0ba74f5232f7522de32089001bf317e0 615 PANTHER PTHR30081 224 282 5.9E-242 T 22-04-2016 YPO3189 0ba74f5232f7522de32089001bf317e0 615 PANTHER PTHR30081 1 173 5.9E-242 T 22-04-2016 YPO3189 0ba74f5232f7522de32089001bf317e0 615 PANTHER PTHR30081 313 613 5.9E-242 T 22-04-2016 YPO3189 0ba74f5232f7522de32089001bf317e0 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 4.1E-84 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3189 0ba74f5232f7522de32089001bf317e0 615 PANTHER PTHR30081:SF1 224 282 5.9E-242 T 22-04-2016 YPO3189 0ba74f5232f7522de32089001bf317e0 615 Pfam PF02355 Protein export membrane protein 433 601 6.4E-16 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPO2489 cfe98ab8c511737112a91340d02a5875 167 Pfam PF10004 Uncharacterized protein conserved in bacteria (DUF2247) 6 162 2.2E-55 T 22-04-2016 IPR016630 Uncharacterised conserved protein UCP015278 YPO2489 cfe98ab8c511737112a91340d02a5875 167 PIRSF PIRSF015278 1 167 7.8E-72 T 22-04-2016 IPR016630 Uncharacterised conserved protein UCP015278 YPO0214 b809f598f80073bab3bc75627b009ce4 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.571 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPO0214 b809f598f80073bab3bc75627b009ce4 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-45 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPO0214 b809f598f80073bab3bc75627b009ce4 92 PIRSF PIRSF002144 1 92 1.9E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPO0214 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.5E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPO0214 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.5E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPO0214 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.5E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPO0214 b809f598f80073bab3bc75627b009ce4 92 Pfam PF00203 Ribosomal protein S19 3 83 2.7E-36 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPO0214 b809f598f80073bab3bc75627b009ce4 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 YPO0214 b809f598f80073bab3bc75627b009ce4 92 Gene3D G3DSA:3.30.860.10 1 91 2.9E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 YPO0214 b809f598f80073bab3bc75627b009ce4 92 SUPERFAMILY SSF54570 3 84 5.75E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 YPO0214 b809f598f80073bab3bc75627b009ce4 92 PANTHER PTHR11880 1 91 5.6E-57 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 Gene3D G3DSA:1.10.10.60 209 257 1.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 Gene3D G3DSA:2.60.120.10 14 88 2.3E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 Pfam PF02311 AraC-like ligand binding domain 25 134 8.3E-9 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 Pfam PF12833 Helix-turn-helix domain 178 255 4.6E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 3.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 3.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 SUPERFAMILY SSF46689 208 256 3.36E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 PANTHER PTHR11019 19 255 2.0E-136 T 22-04-2016 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 SUPERFAMILY SSF51182 16 154 6.23E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 250 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 Gene3D G3DSA:1.10.10.60 153 208 2.6E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 SMART SM00342 172 254 2.2E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO2762 e3c34ad1149c9a2da9896b4b09707fd0 261 PANTHER PTHR11019:SF98 19 255 2.0E-136 T 22-04-2016 YPO2957 34f41faef72eff22013f27c569ad5abe 370 PANTHER PTHR30163 1 368 6.2E-230 T 22-04-2016 IPR011757 Lytic transglycosylase MltB YPO2957 34f41faef72eff22013f27c569ad5abe 370 SUPERFAMILY SSF53955 61 357 2.49E-94 T 22-04-2016 IPR023346 Lysozyme-like domain YPO2957 34f41faef72eff22013f27c569ad5abe 370 Pfam PF13406 Transglycosylase SLT domain 61 355 1.0E-92 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 YPO2957 34f41faef72eff22013f27c569ad5abe 370 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 67 358 7.1E-121 T 22-04-2016 IPR011757 Lytic transglycosylase MltB YPO2957 34f41faef72eff22013f27c569ad5abe 370 PANTHER PTHR30163:SF0 1 368 6.2E-230 T 22-04-2016 YPO2957 34f41faef72eff22013f27c569ad5abe 370 Gene3D G3DSA:1.10.530.10 250 360 1.7E-57 T 22-04-2016 YPO2957 34f41faef72eff22013f27c569ad5abe 370 Gene3D G3DSA:1.10.530.10 116 169 1.7E-57 T 22-04-2016 YPO2749 d59b642150930aceec0c161a0cf55674 176 SMART SM00463 95 173 5.1E-18 T 22-04-2016 IPR002625 Smr domain YPO2749 d59b642150930aceec0c161a0cf55674 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 39.916 T 22-04-2016 IPR022990 Uncharacterised protein family UPF0115 YPO2749 d59b642150930aceec0c161a0cf55674 176 SUPERFAMILY SSF160443 95 150 1.16E-9 T 22-04-2016 IPR002625 Smr domain YPO2749 d59b642150930aceec0c161a0cf55674 176 Pfam PF01713 Smr domain 98 170 1.0E-17 T 22-04-2016 IPR002625 Smr domain YPO2749 d59b642150930aceec0c161a0cf55674 176 PANTHER PTHR35562 1 176 4.1E-119 T 22-04-2016 YPO2749 d59b642150930aceec0c161a0cf55674 176 PANTHER PTHR35562:SF1 1 176 4.1E-119 T 22-04-2016 YPO2951 e54e861a7c8b254d27e3eaa1ecca7b32 445 PANTHER PTHR34496 1 354 0.0 T 22-04-2016 YPO2951 e54e861a7c8b254d27e3eaa1ecca7b32 445 Pfam PF11397 Glycosyltransferase (GlcNAc) 72 306 4.2E-59 T 22-04-2016 IPR021067 Glycosyltransferase, GlcNAc KEGG: 00052+2.4.1.22|UniPathway: UPA00378 YPO2951 e54e861a7c8b254d27e3eaa1ecca7b32 445 Pfam PF11397 Glycosyltransferase (GlcNAc) 6 46 5.2E-9 T 22-04-2016 IPR021067 Glycosyltransferase, GlcNAc KEGG: 00052+2.4.1.22|UniPathway: UPA00378 YPO2951 e54e861a7c8b254d27e3eaa1ecca7b32 445 PANTHER PTHR34496:SF5 1 354 0.0 T 22-04-2016 YPO2951 e54e861a7c8b254d27e3eaa1ecca7b32 445 SUPERFAMILY SSF53448 83 254 9.45E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Gene3D G3DSA:1.10.8.60 343 428 1.2E-37 T 22-04-2016 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 SMART SM01086 766 855 2.3E-36 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 842 8.8E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 9.9E-57 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Gene3D G3DSA:3.40.50.300 160 342 6.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 SUPERFAMILY SSF81923 4 156 1.86E-41 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Gene3D G3DSA:3.40.50.300 551 777 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 2.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 PANTHER PTHR11638 1 856 0.0 T 22-04-2016 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 PANTHER PTHR11638:SF18 1 856 0.0 T 22-04-2016 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 SUPERFAMILY SSF52540 159 545 1.12E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 SMART SM00382 198 344 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 SMART SM00382 597 733 5.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 4.4E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.3E-9 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 SUPERFAMILY SSF52540 546 851 2.72E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Gene3D G3DSA:1.10.8.60 778 855 2.0E-29 T 22-04-2016 YPO3275 2c5fc0112f2ba48ac36e1d5bfca72875 857 Gene3D G3DSA:1.10.1780.10 1 148 1.7E-46 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO3692 69a264fdd6e0df814dce196e16219f6e 446 SUPERFAMILY SSF111283 13 446 6.28E-128 T 22-04-2016 YPO3692 69a264fdd6e0df814dce196e16219f6e 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 3.6E-53 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO3692 69a264fdd6e0df814dce196e16219f6e 446 PANTHER PTHR30624 2 446 1.4E-199 T 22-04-2016 YPO3692 69a264fdd6e0df814dce196e16219f6e 446 PANTHER PTHR30624:SF1 2 446 1.4E-199 T 22-04-2016 YPO0993 3f5a20a50f78819b347262006887fe85 442 Gene3D G3DSA:3.50.50.60 84 203 4.3E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0993 3f5a20a50f78819b347262006887fe85 442 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 333 2.3E-110 T 22-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPO0993 3f5a20a50f78819b347262006887fe85 442 PANTHER PTHR23024:SF198 46 107 1.9E-42 T 22-04-2016 YPO0993 3f5a20a50f78819b347262006887fe85 442 SUPERFAMILY SSF51905 1 228 7.29E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0993 3f5a20a50f78819b347262006887fe85 442 SUPERFAMILY SSF51905 132 196 4.66E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0993 3f5a20a50f78819b347262006887fe85 442 SUPERFAMILY SSF51905 262 401 4.66E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0993 3f5a20a50f78819b347262006887fe85 442 PANTHER PTHR23024 46 107 1.9E-42 T 22-04-2016 YPO3211 96d1351cefcf1f1f255bc10e5800b6d8 304 PANTHER PTHR18964:SF123 3 299 9.6E-104 T 22-04-2016 YPO3211 96d1351cefcf1f1f255bc10e5800b6d8 304 Gene3D G3DSA:3.30.420.40 2 131 3.6E-35 T 22-04-2016 YPO3211 96d1351cefcf1f1f255bc10e5800b6d8 304 Gene3D G3DSA:3.30.420.40 132 281 5.1E-47 T 22-04-2016 YPO3211 96d1351cefcf1f1f255bc10e5800b6d8 304 PANTHER PTHR18964 3 299 9.6E-104 T 22-04-2016 YPO3211 96d1351cefcf1f1f255bc10e5800b6d8 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family YPO3211 96d1351cefcf1f1f255bc10e5800b6d8 304 Pfam PF00480 ROK family 3 300 3.0E-84 T 22-04-2016 IPR000600 ROK family YPO3211 96d1351cefcf1f1f255bc10e5800b6d8 304 SUPERFAMILY SSF53067 2 300 2.91E-60 T 22-04-2016 YPO2163 0d1f4efabfc296d45e4602e98ee885f8 183 Pfam PF00881 Nitroreductase family 8 161 1.4E-21 T 22-04-2016 IPR029479 Nitroreductase YPO2163 0d1f4efabfc296d45e4602e98ee885f8 183 SUPERFAMILY SSF55469 1 177 2.62E-38 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 YPO2163 0d1f4efabfc296d45e4602e98ee885f8 183 PIRSF PIRSF000232 1 182 2.0E-62 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- YPO2163 0d1f4efabfc296d45e4602e98ee885f8 183 PANTHER PTHR23026:SF107 1 174 1.8E-95 T 22-04-2016 YPO2163 0d1f4efabfc296d45e4602e98ee885f8 183 PANTHER PTHR23026 1 174 1.8E-95 T 22-04-2016 YPO2163 0d1f4efabfc296d45e4602e98ee885f8 183 Gene3D G3DSA:3.40.109.10 1 168 3.9E-39 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 PANTHER PTHR31223 83 342 2.1E-200 T 22-04-2016 YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 PANTHER PTHR31223 359 384 2.1E-200 T 22-04-2016 YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 4.9E-58 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 3.9E-45 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Pfam PF03641 Possible lysine decarboxylase 190 329 7.9E-33 T 22-04-2016 IPR031100 LOG family YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Gene3D G3DSA:3.40.50.450 125 452 8.9E-126 T 22-04-2016 YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 PANTHER PTHR31223:SF12 83 342 2.1E-200 T 22-04-2016 YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 PANTHER PTHR31223:SF12 359 384 2.1E-200 T 22-04-2016 YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 Gene3D G3DSA:3.30.1850.10 2 112 1.3E-52 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 YPO1033 ea93904e0faab3c4fb74f6ce2f6f53f2 454 SUPERFAMILY SSF102405 120 330 4.88E-42 T 22-04-2016 YPO1426 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1426 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1426 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1426 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1426 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1426 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1426 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1426 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0096 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0096 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0096 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0096 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0096 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0096 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0096 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0096 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1730 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1730 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1730 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1730 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1730 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1730 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1730 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1730 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO3592 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3592 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3592 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3592 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3592 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3592 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3592 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3592 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2364 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2364 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2364 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2364 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2364 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2364 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2364 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2364 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0527 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0527 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0527 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0527 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0527 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0527 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0527 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0527 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2931 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2931 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2931 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2931 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2931 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2931 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2931 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2931 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1131 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1131 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1131 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1131 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1131 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1131 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1131 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1131 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO3283 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3283 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3283 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3283 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3283 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3283 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3283 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3283 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1691 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1691 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1691 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1691 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1691 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1691 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1691 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1691 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO3543 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3543 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3543 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3543 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3543 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3543 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3543 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3543 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1085 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1085 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1085 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1085 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1085 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1085 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1085 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1085 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0566 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0566 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0566 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0566 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0566 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0566 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0566 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0566 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2722 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2722 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2722 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2722 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2722 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2722 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2722 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2722 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2642 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2642 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2642 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2642 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2642 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2642 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2642 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2642 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0385 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0385 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0385 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0385 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0385 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0385 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0385 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0385 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2517 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2517 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2517 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2517 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2517 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2517 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2517 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2517 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1339 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1339 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1339 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1339 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1339 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1339 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1339 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1339 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0923 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0923 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0923 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0923 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0923 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0923 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0923 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0923 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2809 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2809 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2809 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2809 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2809 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2809 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2809 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2809 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO3208 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3208 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3208 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3208 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3208 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3208 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3208 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3208 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO3755 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3755 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3755 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3755 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3755 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3755 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3755 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3755 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1519 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1519 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1519 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1519 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1519 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1519 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1519 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1519 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2086 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2086 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2086 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2086 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2086 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2086 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2086 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2086 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO4009 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO4009 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO4009 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO4009 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO4009 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4009 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4009 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO4009 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2025 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2025 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2025 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2025 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2025 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2025 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2025 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2025 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2177 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2177 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2177 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2177 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2177 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2177 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2177 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2177 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO3435 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3435 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3435 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3435 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3435 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3435 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3435 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3435 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0825 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0825 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0825 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0825 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0825 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0825 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0825 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0825 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0248 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0248 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0248 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0248 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0248 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0248 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0248 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0248 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1751 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1751 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1751 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1751 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1751 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1751 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1751 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1751 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0779 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0779 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0779 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0779 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0779 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0779 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0779 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0779 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1622 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1622 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1622 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1622 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1622 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1622 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1622 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1622 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0638 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0638 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0638 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0638 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0638 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0638 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0638 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0638 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2397 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2397 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO2397 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2397 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2397 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2397 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2397 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2397 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1901 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1901 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1901 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1901 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1901 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1901 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1901 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1901 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0172 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0172 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0172 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0172 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0172 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0172 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0172 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0172 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO1014 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1014 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO1014 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1014 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1014 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1014 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1014 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1014 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO3252 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3252 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3252 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3252 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3252 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3252 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3252 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3252 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO0030 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0030 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO0030 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0030 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0030 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0030 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0030 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0030 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO3773 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3773 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3773 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3773 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3773 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3773 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3773 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3773 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO3700 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3700 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3700 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3700 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3700 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3700 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3700 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3700 4225e7fa9345953ea456e809caf3ccb5 260 PANTHER PTHR30050 1 251 4.0E-72 T 22-04-2016 YPO2115 280881553bc86eac6b26ba589a0417e6 135 Pfam PF13554 Bacteriophage related domain of unknown function 5 130 4.9E-36 T 22-04-2016 IPR025395 Protein of unknown function DUF4128 YPO1579 983fa8fef9598a6fda3cfb91ac639749 330 PIRSF PIRSF006470 5 330 2.3E-97 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 YPO1579 983fa8fef9598a6fda3cfb91ac639749 330 PANTHER PTHR33376 1 328 1.3E-197 T 22-04-2016 YPO1579 983fa8fef9598a6fda3cfb91ac639749 330 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 315 7.5E-71 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 YPO1579 983fa8fef9598a6fda3cfb91ac639749 330 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 39 291 8.4E-63 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 YPO1579 983fa8fef9598a6fda3cfb91ac639749 330 PANTHER PTHR33376:SF6 1 328 1.3E-197 T 22-04-2016 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 Gene3D G3DSA:3.40.190.10 122 226 2.2E-7 T 22-04-2016 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 SMART SM00062 44 268 1.6E-37 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 49.47 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 PANTHER PTHR21666 273 484 5.6E-143 T 22-04-2016 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 PANTHER PTHR21666:SF215 273 484 5.6E-143 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 Gene3D G3DSA:3.40.190.10 227 266 5.3E-17 T 22-04-2016 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 Gene3D G3DSA:3.40.190.10 41 121 5.3E-17 T 22-04-2016 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 267 8.4E-35 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 Pfam PF01464 Transglycosylase SLT domain 298 402 2.6E-23 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 Gene3D G3DSA:1.10.530.10 287 460 1.4E-37 T 22-04-2016 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 SUPERFAMILY SSF53850 45 267 4.35E-40 T 22-04-2016 YPO2922 58d6fba5dd2af73f33e584d4b4bb2591 486 SUPERFAMILY SSF53955 290 451 2.15E-35 T 22-04-2016 IPR023346 Lysozyme-like domain YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 PANTHER PTHR11444 1 477 2.1E-304 T 22-04-2016 IPR000362 Fumarate lyase family YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 SUPERFAMILY SSF48557 2 458 1.02E-141 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 Pfam PF00206 Lyase 13 345 3.0E-110 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 3.0E-263 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 Gene3D G3DSA:1.10.40.30 411 462 6.8E-19 T 22-04-2016 YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.5E-17 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 5.2E-27 T 22-04-2016 IPR000362 Fumarate lyase family YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 5.2E-27 T 22-04-2016 IPR000362 Fumarate lyase family YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 5.2E-27 T 22-04-2016 IPR000362 Fumarate lyase family YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 5.2E-27 T 22-04-2016 IPR000362 Fumarate lyase family YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 Gene3D G3DSA:1.20.200.10 143 405 7.9E-87 T 22-04-2016 YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 Gene3D G3DSA:1.10.275.10 4 142 3.0E-56 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.9E-5 T 22-04-2016 YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 3.9E-5 T 22-04-2016 YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.9E-5 T 22-04-2016 YPO0348 fdb8a7d01f35c63be6494dea28077bb4 478 PANTHER PTHR11444:SF25 1 477 2.1E-304 T 22-04-2016 YPO1660 723e63e8be91604bf1eb53b3aa126997 236 PANTHER PTHR33778 1 236 2.2E-125 T 22-04-2016 YPO1660 723e63e8be91604bf1eb53b3aa126997 236 Pfam PF02308 MgtC family 14 133 3.0E-38 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO1660 723e63e8be91604bf1eb53b3aa126997 236 PANTHER PTHR33778:SF3 1 236 2.2E-125 T 22-04-2016 YPO1660 723e63e8be91604bf1eb53b3aa126997 236 PRINTS PR01837 MgtC/SapB protein signature 36 54 5.0E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO1660 723e63e8be91604bf1eb53b3aa126997 236 PRINTS PR01837 MgtC/SapB protein signature 17 36 5.0E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO1660 723e63e8be91604bf1eb53b3aa126997 236 PRINTS PR01837 MgtC/SapB protein signature 88 112 5.0E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO1660 723e63e8be91604bf1eb53b3aa126997 236 PRINTS PR01837 MgtC/SapB protein signature 61 83 5.0E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PANTHER PTHR26402 3 195 2.2E-94 T 22-04-2016 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Gene3D G3DSA:3.40.50.2300 2 142 7.8E-27 T 22-04-2016 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 2.1E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SMART SM00421 136 193 2.2E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 5.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 5.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 5.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 PANTHER PTHR26402:SF500 3 195 2.2E-94 T 22-04-2016 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SMART SM00448 3 113 2.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SUPERFAMILY SSF46894 122 194 4.76E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 SUPERFAMILY SSF52172 2 129 1.57E-24 T 22-04-2016 IPR011006 CheY-like superfamily YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Gene3D G3DSA:1.10.10.10 143 194 2.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO4012 6315ca9f4c8762c0ec5ad6e07d3c3bf5 196 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.948 T 22-04-2016 IPR005215 Trigger factor GO:0015031 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 Gene3D G3DSA:1.10.3120.10 216 388 4.5E-62 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 PANTHER PTHR30560 1 430 6.4E-152 T 22-04-2016 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 SUPERFAMILY SSF102735 1 131 1.7E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 PANTHER PTHR30560:SF3 1 430 6.4E-152 T 22-04-2016 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 Gene3D G3DSA:3.30.70.1050 1 118 9.7E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 SUPERFAMILY SSF54534 96 240 9.82E-37 T 22-04-2016 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 230 5.5E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 SUPERFAMILY SSF109998 248 429 4.32E-48 T 22-04-2016 IPR027304 Trigger factor/SurA domain YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 4.8E-144 T 22-04-2016 IPR005215 Trigger factor GO:0015031 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 Gene3D G3DSA:3.10.50.40 152 215 1.5E-9 T 22-04-2016 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.7E-44 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.2E-40 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YPO3158 2a4e7e7a4452dd643fdf525ec2a51a89 434 PIRSF PIRSF003095 1 434 3.0E-130 T 22-04-2016 IPR005215 Trigger factor GO:0015031 YPO3321 1f0a52ba06f8db9f239ab5fa55d67a28 176 Pfam PF01292 Prokaryotic cytochrome b561 5 172 2.5E-19 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YPO3321 1f0a52ba06f8db9f239ab5fa55d67a28 176 PANTHER PTHR30529 1 176 2.8E-144 T 22-04-2016 YPO3321 1f0a52ba06f8db9f239ab5fa55d67a28 176 PANTHER PTHR30529:SF4 1 176 2.8E-144 T 22-04-2016 YPO3321 1f0a52ba06f8db9f239ab5fa55d67a28 176 SUPERFAMILY SSF81342 3 172 2.35E-24 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPO2758 d9747850fa582a18146ef9600ae3ecc5 231 Gene3D G3DSA:3.40.50.1860 114 217 1.5E-37 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO2758 d9747850fa582a18146ef9600ae3ecc5 231 SUPERFAMILY SSF53681 119 230 4.91E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO2758 d9747850fa582a18146ef9600ae3ecc5 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 2.4E-75 T 22-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 YPO2758 d9747850fa582a18146ef9600ae3ecc5 231 PANTHER PTHR21198 1 229 1.2E-98 T 22-04-2016 YPO2758 d9747850fa582a18146ef9600ae3ecc5 231 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 80 89 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO2758 d9747850fa582a18146ef9600ae3ecc5 231 PANTHER PTHR21198:SF7 1 229 1.2E-98 T 22-04-2016 YPO2758 d9747850fa582a18146ef9600ae3ecc5 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 225 1.1E-58 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO2758 d9747850fa582a18146ef9600ae3ecc5 231 SUPERFAMILY SSF53681 2 117 7.85E-36 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO2758 d9747850fa582a18146ef9600ae3ecc5 231 Gene3D G3DSA:3.40.50.1860 2 113 7.8E-44 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3821 e0a23c85c9530c4e3cb040ea36710156 84 PANTHER PTHR33279 8 80 3.5E-49 T 22-04-2016 YPO3821 e0a23c85c9530c4e3cb040ea36710156 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain YPO3821 e0a23c85c9530c4e3cb040ea36710156 84 SUPERFAMILY SSF64307 4 80 3.01E-27 T 22-04-2016 IPR001455 TusA-like domain YPO3821 e0a23c85c9530c4e3cb040ea36710156 84 Gene3D G3DSA:3.30.110.40 5 80 1.6E-31 T 22-04-2016 IPR001455 TusA-like domain YPO3821 e0a23c85c9530c4e3cb040ea36710156 84 Pfam PF01206 Sulfurtransferase TusA 10 79 1.4E-26 T 22-04-2016 IPR001455 TusA-like domain YPO3821 e0a23c85c9530c4e3cb040ea36710156 84 PANTHER PTHR33279:SF5 8 80 3.5E-49 T 22-04-2016 YPO3821 e0a23c85c9530c4e3cb040ea36710156 84 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.742 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 YPO2935 1b97f4182aa764b170e504ca9c5f3a0b 186 PANTHER PTHR37625:SF2 12 173 1.1E-84 T 22-04-2016 YPO2935 1b97f4182aa764b170e504ca9c5f3a0b 186 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 19 159 9.9E-44 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPO2935 1b97f4182aa764b170e504ca9c5f3a0b 186 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 29 152 1.2E-31 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPO2935 1b97f4182aa764b170e504ca9c5f3a0b 186 PANTHER PTHR37625 12 173 1.1E-84 T 22-04-2016 YPO1332 68ff700802ade253dec780e778cbeeba 377 Pfam PF00005 ABC transporter 36 177 2.3E-39 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1332 68ff700802ade253dec780e778cbeeba 377 Gene3D G3DSA:3.40.50.300 11 254 6.4E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1332 68ff700802ade253dec780e778cbeeba 377 PANTHER PTHR24220:SF481 21 331 4.4E-205 T 22-04-2016 YPO1332 68ff700802ade253dec780e778cbeeba 377 SMART SM00382 44 227 1.5E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1332 68ff700802ade253dec780e778cbeeba 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.1E-146 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 YPO1332 68ff700802ade253dec780e778cbeeba 377 Pfam PF08402 TOBE domain 295 375 3.4E-20 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPO1332 68ff700802ade253dec780e778cbeeba 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1332 68ff700802ade253dec780e778cbeeba 377 PANTHER PTHR24220 21 331 4.4E-205 T 22-04-2016 YPO1332 68ff700802ade253dec780e778cbeeba 377 SUPERFAMILY SSF50331 252 375 2.28E-17 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO1332 68ff700802ade253dec780e778cbeeba 377 SUPERFAMILY SSF52540 19 257 1.02E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1183 be7223be5a8389d10b7410bb1f04d929 309 SUPERFAMILY SSF53850 26 300 2.3E-44 T 22-04-2016 YPO1183 be7223be5a8389d10b7410bb1f04d929 309 Gene3D G3DSA:3.40.190.10 132 207 2.2E-8 T 22-04-2016 YPO1183 be7223be5a8389d10b7410bb1f04d929 309 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 268 8.4E-85 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 YPO1183 be7223be5a8389d10b7410bb1f04d929 309 Gene3D G3DSA:3.40.190.10 54 131 2.2E-5 T 22-04-2016 YPO1183 be7223be5a8389d10b7410bb1f04d929 309 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 305 8.1E-103 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 YPO1183 be7223be5a8389d10b7410bb1f04d929 309 PANTHER PTHR35841 4 306 9.5E-101 T 22-04-2016 YPO1183 be7223be5a8389d10b7410bb1f04d929 309 PANTHER PTHR35841:SF1 4 306 9.5E-101 T 22-04-2016 YPO1183 be7223be5a8389d10b7410bb1f04d929 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 44 285 2.3E-47 T 22-04-2016 YPO0295 4b53b87bd8a6f1f5c7e1c9ad45a953be 394 Pfam PF02342 TerD domain 25 159 2.8E-29 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPO0295 4b53b87bd8a6f1f5c7e1c9ad45a953be 394 PANTHER PTHR32097 26 393 1.3E-134 T 22-04-2016 YPO0295 4b53b87bd8a6f1f5c7e1c9ad45a953be 394 PIRSF PIRSF037118 1 394 3.7E-180 T 22-04-2016 IPR017115 Tellurite resistance, TerA YPO0295 4b53b87bd8a6f1f5c7e1c9ad45a953be 394 Gene3D G3DSA:2.60.60.30 25 156 8.0E-25 T 22-04-2016 YPO0295 4b53b87bd8a6f1f5c7e1c9ad45a953be 394 PANTHER PTHR32097:SF3 26 393 1.3E-134 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 SUPERFAMILY SSF53098 329 521 2.01E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.1E-54 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 SMART SM00475 7 268 3.3E-140 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 SMART SM00482 689 896 1.9E-115 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Gene3D G3DSA:3.30.70.370 822 932 2.1E-67 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Gene3D G3DSA:3.30.70.370 666 714 2.1E-67 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Pfam PF01612 3'-5' exonuclease 333 520 5.6E-44 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 SMART SM00279 173 208 1.2E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 SUPERFAMILY SSF47807 171 291 1.26E-31 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Gene3D G3DSA:1.20.1060.10 546 665 5.5E-37 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Pfam PF00476 DNA polymerase family A 555 929 8.4E-156 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 SUPERFAMILY SSF56672 525 932 2.89E-157 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Gene3D G3DSA:1.10.150.20 715 821 2.5E-36 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Gene3D G3DSA:1.10.150.20 187 253 1.2E-25 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 2.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Gene3D G3DSA:3.40.50.1010 8 186 1.6E-73 T 22-04-2016 IPR029060 PIN domain-like YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 1.7E-287 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PANTHER PTHR10133 1 288 0.0 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PANTHER PTHR10133 319 931 0.0 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 6.5E-31 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 Gene3D G3DSA:3.30.420.10 331 545 1.1E-87 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 SMART SM00474 333 520 8.8E-48 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PANTHER PTHR10133:SF27 1 288 0.0 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 PANTHER PTHR10133:SF27 319 931 0.0 T 22-04-2016 YPO0017 93b6ff985ab09e4a849d2893d222aaed 932 SUPERFAMILY SSF88723 7 170 1.84E-57 T 22-04-2016 IPR029060 PIN domain-like YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 PANTHER PTHR21262 1 358 9.6E-243 T 22-04-2016 YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 4 358 2.2E-185 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 PANTHER PTHR21262:SF0 1 358 9.6E-243 T 22-04-2016 YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 SMART SM00471 19 131 1.3E-11 T 22-04-2016 IPR003607 HD/PDEase domain YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 SUPERFAMILY SSF109604 1 168 1.73E-72 T 22-04-2016 YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 Gene3D G3DSA:3.30.460.10 156 302 1.4E-47 T 22-04-2016 YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 Pfam PF04607 Region found in RelA / SpoT proteins 213 323 3.9E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 SMART SM00954 213 323 8.8E-62 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 SUPERFAMILY SSF81301 170 342 9.65E-62 T 22-04-2016 YPMT1.50c 97e2c39aed52c98e598720ce2e205a41 358 Pfam PF13328 HD domain 4 153 1.1E-53 T 22-04-2016 IPR003607 HD/PDEase domain YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 PANTHER PTHR30580 1 731 9.4E-296 T 22-04-2016 YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 1.9E-5 T 22-04-2016 IPR001650 Helicase, C-terminal YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 2.7E-205 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 Gene3D G3DSA:3.40.50.300 456 632 2.7E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 Gene3D G3DSA:3.40.50.300 198 380 6.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 SMART SM00490 492 589 2.5E-8 T 22-04-2016 IPR001650 Helicase, C-terminal YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.587 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 Pfam PF00270 DEAD/DEAH box helicase 203 364 9.3E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 SUPERFAMILY SSF52540 220 440 4.79E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 SUPERFAMILY SSF52540 503 601 4.79E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0110 67f9874e9518899cc9f3d3326eb78e57 732 SMART SM00487 195 395 5.0E-17 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 Pfam PF04539 Sigma-70 region 3 176 250 2.5E-20 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 92 319 2.7E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 PANTHER PTHR30603 13 331 1.1E-210 T 22-04-2016 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 330 2.5E-144 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 SUPERFAMILY SSF88946 58 166 1.02E-45 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 Pfam PF04545 Sigma-70, region 4 264 317 1.8E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 PANTHER PTHR30603:SF15 13 331 1.1E-210 T 22-04-2016 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 Gene3D G3DSA:1.10.10.10 169 218 2.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 SUPERFAMILY SSF88659 169 243 8.72E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 Pfam PF04542 Sigma-70 region 2 96 165 2.9E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 PRINTS PR00046 Major sigma-70 factor signature 144 152 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 PRINTS PR00046 Major sigma-70 factor signature 268 280 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 PRINTS PR00046 Major sigma-70 factor signature 304 315 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 PRINTS PR00046 Major sigma-70 factor signature 120 133 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 PRINTS PR00046 Major sigma-70 factor signature 289 304 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 Pfam PF00140 Sigma-70 factor, region 1.2 58 89 4.2E-11 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 Gene3D G3DSA:1.10.10.10 259 324 2.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 330 39.966 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 Gene3D G3DSA:1.10.601.10 53 165 1.2E-54 T 22-04-2016 YPO3355 3e56cced982c8eef3f2c214c3f11d5ce 332 SUPERFAMILY SSF88659 227 324 1.68E-23 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 99 438 1.0E-61 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 Gene3D G3DSA:1.20.1650.10 28 101 3.9E-24 T 22-04-2016 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 Gene3D G3DSA:3.90.1150.10 390 506 5.7E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 377 392 6.9E-6 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 102 121 6.9E-6 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 142 161 6.9E-6 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 420 439 6.9E-6 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 SUPERFAMILY SSF53383 56 505 2.25E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1529 8e0aa327f4968c1d787a709605d1c928 515 Gene3D G3DSA:3.40.640.10 112 389 6.9E-94 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 PANTHER PTHR11999 55 505 1.5E-268 T 22-04-2016 YPO1529 8e0aa327f4968c1d787a709605d1c928 515 PANTHER PTHR11999:SF106 55 505 1.5E-268 T 22-04-2016 YPO2577 e134e49ef98b5e60316f0703c5028526 508 Gene3D G3DSA:3.40.309.10 267 460 2.6E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO2577 e134e49ef98b5e60316f0703c5028526 508 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 16 491 3.3E-201 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 YPO2577 e134e49ef98b5e60316f0703c5028526 508 SUPERFAMILY SSF53720 4 493 8.77E-144 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPO2577 e134e49ef98b5e60316f0703c5028526 508 Gene3D G3DSA:3.40.605.10 3 266 3.1E-86 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPO2577 e134e49ef98b5e60316f0703c5028526 508 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPO2577 e134e49ef98b5e60316f0703c5028526 508 PANTHER PTHR11699 1 493 0.0 T 22-04-2016 YPO2577 e134e49ef98b5e60316f0703c5028526 508 Pfam PF00171 Aldehyde dehydrogenase family 27 487 7.3E-136 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPO2577 e134e49ef98b5e60316f0703c5028526 508 PANTHER PTHR11699:SF188 1 493 0.0 T 22-04-2016 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 SUPERFAMILY SSF53738 153 261 7.46E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 Gene3D G3DSA:3.30.310.50 374 456 2.9E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 Gene3D G3DSA:3.40.120.10 6 148 2.9E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 SUPERFAMILY SSF53738 263 368 9.03E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 Gene3D G3DSA:3.40.120.10 256 368 1.5E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 1.6E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 1.6E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 1.6E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 1.6E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 371 3.5E-26 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 132 2.7E-30 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 PANTHER PTHR22573:SF18 7 456 1.2E-187 T 22-04-2016 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 PANTHER PTHR22573 7 456 1.2E-187 T 22-04-2016 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 258 3.4E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 SUPERFAMILY SSF53738 4 176 8.24E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 SUPERFAMILY SSF55957 373 456 3.92E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 Gene3D G3DSA:3.40.120.10 172 254 2.4E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3097 05cd5b25a0373e16290ddbb82ccbd568 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 453 8.6E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3360 95852ba68db050b5e226a97988b45328 162 PANTHER PTHR32125 1 161 3.1E-60 T 22-04-2016 YPO3360 95852ba68db050b5e226a97988b45328 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 158 36.623 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3360 95852ba68db050b5e226a97988b45328 162 Gene3D G3DSA:3.30.1330.50 1 159 5.8E-73 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3360 95852ba68db050b5e226a97988b45328 162 Pfam PF02542 YgbB family 1 156 4.6E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3360 95852ba68db050b5e226a97988b45328 162 SUPERFAMILY SSF69765 1 158 2.49E-64 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3360 95852ba68db050b5e226a97988b45328 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 157 1.6E-69 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3360 95852ba68db050b5e226a97988b45328 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3337 59f94d016a129d10c640a1c5a064980e 261 Hamap MF_01974 Methionine aminopeptidase [map]. 4 251 39.562 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPO3337 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO3337 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO3337 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO3337 59f94d016a129d10c640a1c5a064980e 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO3337 59f94d016a129d10c640a1c5a064980e 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPO3337 59f94d016a129d10c640a1c5a064980e 261 PANTHER PTHR10804 4 249 3.9E-135 T 22-04-2016 YPO3337 59f94d016a129d10c640a1c5a064980e 261 Pfam PF00557 Metallopeptidase family M24 14 242 1.2E-50 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO3337 59f94d016a129d10c640a1c5a064980e 261 SUPERFAMILY SSF55920 6 258 1.13E-87 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO3337 59f94d016a129d10c640a1c5a064980e 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 249 1.5E-90 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPO3337 59f94d016a129d10c640a1c5a064980e 261 PANTHER PTHR10804:SF75 4 249 3.9E-135 T 22-04-2016 YPO3337 59f94d016a129d10c640a1c5a064980e 261 Gene3D G3DSA:3.90.230.10 6 255 1.1E-91 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO2425 4f1037756aaabe53b7756ba52229b6b4 335 PANTHER PTHR30472:SF29 7 335 8.6E-228 T 22-04-2016 YPO2425 4f1037756aaabe53b7756ba52229b6b4 335 Pfam PF01032 FecCD transport family 29 330 1.0E-83 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO2425 4f1037756aaabe53b7756ba52229b6b4 335 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 7 333 32.992 T 22-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 YPO2425 4f1037756aaabe53b7756ba52229b6b4 335 SUPERFAMILY SSF81345 12 330 5.1E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO2425 4f1037756aaabe53b7756ba52229b6b4 335 PANTHER PTHR30472 7 335 8.6E-228 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO2425 4f1037756aaabe53b7756ba52229b6b4 335 Gene3D G3DSA:1.10.3470.10 11 331 1.9E-95 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 Gene3D G3DSA:3.40.190.10 3 139 4.4E-52 T 22-04-2016 YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 Gene3D G3DSA:3.30.70.120 226 299 8.3E-31 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 4.8E-48 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 SUPERFAMILY SSF54913 226 298 1.56E-21 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 205 298 9.5E-33 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 PANTHER PTHR21403:SF0 3 299 5.3E-134 T 22-04-2016 YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.725 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 Pfam PF08029 HisG, C-terminal domain 223 296 3.3E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 SUPERFAMILY SSF53850 6 224 1.78E-70 T 22-04-2016 YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 PANTHER PTHR21403 3 299 5.3E-134 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPO1549 b24ddaf28bca15f0bd5ab6147a42608c 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 2.1E-56 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 SUPERFAMILY SSF90123 40 359 4.32E-58 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 SMART SM00382 406 592 7.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 SUPERFAMILY SSF52540 370 617 5.13E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 Pfam PF00664 ABC transporter transmembrane region 61 335 6.1E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 Gene3D G3DSA:1.20.1560.10 44 369 9.5E-61 T 22-04-2016 YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 PANTHER PTHR24221 29 625 0.0 T 22-04-2016 YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 Gene3D G3DSA:3.40.50.300 381 610 1.1E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 Pfam PF00005 ABC transporter 397 546 4.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 PANTHER PTHR24221:SF250 29 625 0.0 T 22-04-2016 YPO2588 b9c94ec1cc1fd5925342d23198921e53 631 ProSitePatterns PS00211 ABC transporters family signature. 518 532 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 Gene3D G3DSA:1.10.1040.10 181 434 5.6E-118 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 PIRSF PIRSF000109 1 469 2.7E-242 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 467 1.6E-132 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 Gene3D G3DSA:3.40.50.720 1 180 4.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1541 ba5338606d1b924ac5953b8967eca97f 469 Gene3D G3DSA:1.20.5.320 437 468 1.3E-22 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 PANTHER PTHR11811:SF25 1 468 8.6E-305 T 22-04-2016 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 PANTHER PTHR11811 1 468 8.6E-305 T 22-04-2016 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 5.2E-229 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 8.3E-52 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 SMART SM01350 179 468 1.7E-224 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YPO1541 ba5338606d1b924ac5953b8967eca97f 469 SUPERFAMILY SSF51735 4 172 3.26E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1541 ba5338606d1b924ac5953b8967eca97f 469 SUPERFAMILY SSF48179 177 468 9.78E-133 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO0462 b56d049c51564f02418a24f9fe948a1f 258 Pfam PF03883 Protein of unknown function (DUF328) 1 242 2.8E-93 T 22-04-2016 IPR005583 Peroxide stress protein YaaA YPO0462 b56d049c51564f02418a24f9fe948a1f 258 PANTHER PTHR30283 2 254 2.0E-127 T 22-04-2016 YPO0462 b56d049c51564f02418a24f9fe948a1f 258 PANTHER PTHR30283:SF3 2 254 2.0E-127 T 22-04-2016 YPO0462 b56d049c51564f02418a24f9fe948a1f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.486 T 22-04-2016 IPR005583 Peroxide stress protein YaaA YPO1699 580e41be0b54d6688e9a0ba752be2a7b 176 SMART SM00972 118 173 2.9E-19 T 22-04-2016 IPR007893 Spore coat protein U YPO1699 580e41be0b54d6688e9a0ba752be2a7b 176 PANTHER PTHR37089 2 176 3.1E-96 T 22-04-2016 YPO1699 580e41be0b54d6688e9a0ba752be2a7b 176 PANTHER PTHR37089:SF4 2 176 3.1E-96 T 22-04-2016 YPO1699 580e41be0b54d6688e9a0ba752be2a7b 176 Pfam PF05229 Spore Coat Protein U domain 31 173 9.9E-35 T 22-04-2016 IPR007893 Spore coat protein U YPO0442 adea6d87aeebc1f454c03413023c996b 326 PANTHER PTHR10000 1 322 7.9E-222 T 22-04-2016 YPO0442 adea6d87aeebc1f454c03413023c996b 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 7.1E-24 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 YPO0442 adea6d87aeebc1f454c03413023c996b 326 Gene3D G3DSA:3.40.50.1000 175 307 2.8E-38 T 22-04-2016 IPR023214 HAD-like domain YPO0442 adea6d87aeebc1f454c03413023c996b 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 2.3E-87 T 22-04-2016 YPO0442 adea6d87aeebc1f454c03413023c996b 326 PANTHER PTHR10000:SF7 1 322 7.9E-222 T 22-04-2016 YPO0442 adea6d87aeebc1f454c03413023c996b 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 147 282 1.0E-16 T 22-04-2016 YPO0442 adea6d87aeebc1f454c03413023c996b 326 Gene3D G3DSA:1.10.150.210 123 174 3.5E-28 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 YPO0442 adea6d87aeebc1f454c03413023c996b 326 SUPERFAMILY SSF56784 112 316 1.11E-48 T 22-04-2016 IPR023214 HAD-like domain YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 PANTHER PTHR24093:SF49 8 593 0.0 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 PANTHER PTHR24093:SF49 631 687 0.0 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 Gene3D G3DSA:2.70.150.10 68 208 1.1E-22 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 Gene3D G3DSA:3.40.1110.10 322 448 5.5E-55 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 41.102 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 683 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 4.2E-36 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 SUPERFAMILY SSF81660 322 456 5.89E-37 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 Pfam PF00122 E1-E2 ATPase 72 302 1.7E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 PANTHER PTHR24093 8 593 0.0 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 PANTHER PTHR24093 631 687 0.0 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 610 1.3E-48 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 347 1.1E-33 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 SUPERFAMILY SSF81665 208 305 1.7E-9 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 SUPERFAMILY SSF81665 60 103 1.7E-9 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 22-04-2016 YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 SUPERFAMILY SSF56784 299 323 1.27E-38 T 22-04-2016 IPR023214 HAD-like domain YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 SUPERFAMILY SSF56784 383 410 1.27E-38 T 22-04-2016 IPR023214 HAD-like domain YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 SUPERFAMILY SSF56784 441 565 1.27E-38 T 22-04-2016 IPR023214 HAD-like domain YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 Gene3D G3DSA:3.40.50.1000 449 569 2.8E-35 T 22-04-2016 IPR023214 HAD-like domain YPO2691 614a60944c80ef9fc0f4376509d23f0c 688 SUPERFAMILY SSF81653 115 207 1.7E-20 T 22-04-2016 YPO2879 cab8f99a68acec2aca27ffcdb67ded08 375 SUPERFAMILY SSF51604 23 139 7.42E-10 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO2879 cab8f99a68acec2aca27ffcdb67ded08 375 Gene3D G3DSA:3.20.20.70 35 132 1.8E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2879 cab8f99a68acec2aca27ffcdb67ded08 375 PIRSF PIRSF004640 1 364 2.1E-145 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YPO2879 cab8f99a68acec2aca27ffcdb67ded08 375 SUPERFAMILY SSF56014 266 332 1.6E-10 T 22-04-2016 YPO2879 cab8f99a68acec2aca27ffcdb67ded08 375 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.01 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YPO2879 cab8f99a68acec2aca27ffcdb67ded08 375 Pfam PF04551 GcpE protein 14 354 2.9E-129 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YPO2879 cab8f99a68acec2aca27ffcdb67ded08 375 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 7.4E-123 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YPO2879 cab8f99a68acec2aca27ffcdb67ded08 375 PANTHER PTHR30454 1 372 9.7E-224 T 22-04-2016 YPO3296 5325e7c52a64d04049c44637bdc10837 453 SUPERFAMILY SSF47446 298 431 8.5E-46 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 YPO3296 5325e7c52a64d04049c44637bdc10837 453 SMART SM00963 1 86 1.9E-37 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3296 5325e7c52a64d04049c44637bdc10837 453 Gene3D G3DSA:3.40.50.300 94 297 2.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3296 5325e7c52a64d04049c44637bdc10837 453 Pfam PF02978 Signal peptide binding domain 329 427 1.3E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 YPO3296 5325e7c52a64d04049c44637bdc10837 453 PANTHER PTHR11564:SF7 1 434 1.3E-277 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 YPO3296 5325e7c52a64d04049c44637bdc10837 453 Gene3D G3DSA:1.20.120.140 2 88 4.1E-36 T 22-04-2016 YPO3296 5325e7c52a64d04049c44637bdc10837 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.905 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 YPO3296 5325e7c52a64d04049c44637bdc10837 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.4E-23 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3296 5325e7c52a64d04049c44637bdc10837 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.4E-179 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 YPO3296 5325e7c52a64d04049c44637bdc10837 453 SUPERFAMILY SSF52540 42 354 3.37E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3296 5325e7c52a64d04049c44637bdc10837 453 SMART SM00382 99 247 4.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3296 5325e7c52a64d04049c44637bdc10837 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.6E-75 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3296 5325e7c52a64d04049c44637bdc10837 453 Gene3D G3DSA:1.10.260.30 329 431 3.2E-40 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 YPO3296 5325e7c52a64d04049c44637bdc10837 453 SMART SM00962 100 296 6.6E-117 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3296 5325e7c52a64d04049c44637bdc10837 453 PANTHER PTHR11564 1 434 1.3E-277 T 22-04-2016 YPO3296 5325e7c52a64d04049c44637bdc10837 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3678 c54312269d5c5d12961b0a76347a3e72 1496 SUPERFAMILY SSF69318 391 676 5.49E-17 T 22-04-2016 YPO3678 c54312269d5c5d12961b0a76347a3e72 1496 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 648 822 3.3E-29 T 22-04-2016 IPR022045 Insecticide toxin TcdB middle/N-terminal YPO3678 c54312269d5c5d12961b0a76347a3e72 1496 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 33 321 1.2E-101 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPO3678 c54312269d5c5d12961b0a76347a3e72 1496 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 872 1018 4.5E-57 T 22-04-2016 IPR022044 Insecticide toxin TcdB middle/C-terminal YPO3678 c54312269d5c5d12961b0a76347a3e72 1496 Gene3D G3DSA:2.130.10.130 451 659 3.1E-5 T 22-04-2016 YPO3678 c54312269d5c5d12961b0a76347a3e72 1496 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 30 51 1.86E-28 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPO3678 c54312269d5c5d12961b0a76347a3e72 1496 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 189 207 1.86E-28 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPO3678 c54312269d5c5d12961b0a76347a3e72 1496 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 302 320 1.86E-28 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPO3678 c54312269d5c5d12961b0a76347a3e72 1496 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 89 105 1.86E-28 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 YPO2382 a5b7e108b05caa4a43a806a8ca643aa4 215 Gene3D G3DSA:3.30.420.10 10 209 3.2E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2382 a5b7e108b05caa4a43a806a8ca643aa4 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 1.4E-105 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 YPO2382 a5b7e108b05caa4a43a806a8ca643aa4 215 PANTHER PTHR30231 7 213 5.2E-121 T 22-04-2016 YPO2382 a5b7e108b05caa4a43a806a8ca643aa4 215 SUPERFAMILY SSF53098 9 207 9.11E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2382 a5b7e108b05caa4a43a806a8ca643aa4 215 Pfam PF00929 Exonuclease 20 194 3.0E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO2382 a5b7e108b05caa4a43a806a8ca643aa4 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 116.596 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 YPO2382 a5b7e108b05caa4a43a806a8ca643aa4 215 SMART SM00479 18 203 8.1E-41 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO2382 a5b7e108b05caa4a43a806a8ca643aa4 215 PANTHER PTHR30231:SF2 7 213 5.2E-121 T 22-04-2016 YPO0131 3a20f28cb95ef93f9fe10c53676daffb 85 Gene3D G3DSA:1.10.10.10 10 55 5.6E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0131 3a20f28cb95ef93f9fe10c53676daffb 85 Hamap MF_01586 Ferrous iron transport protein C [feoC]. 1 79 30.156 T 22-04-2016 IPR023732 Probable [Fe-S]-dependent transcriptional repressor YPO0131 3a20f28cb95ef93f9fe10c53676daffb 85 SUPERFAMILY SSF46785 1 75 7.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0131 3a20f28cb95ef93f9fe10c53676daffb 85 Pfam PF09012 FeoC like transcriptional regulator 3 77 1.1E-19 T 22-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 2.0E-51 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 7.0E-7 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 7.0E-7 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 Gene3D G3DSA:3.20.20.70 1 292 5.6E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 PIRSF PIRSF001365 1 297 1.9E-66 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 PANTHER PTHR12128 2 297 1.9E-151 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 PANTHER PTHR12128:SF30 2 297 1.9E-151 T 22-04-2016 YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 SUPERFAMILY SSF51569 1 292 2.3E-72 T 22-04-2016 YPO3024 25fe26e4149f44c9390fa2699ff522d2 297 SMART SM01130 3 294 1.1E-68 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3801 2f95839e70975505831aa308d0ee8008 172 Pfam PF04449 CS1 type fimbrial major subunit 28 168 2.0E-4 T 22-04-2016 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 YPO2388 0eb4c69663ccc909a2a47ab988a6459b 310 Gene3D G3DSA:3.40.190.10 174 257 1.1E-5 T 22-04-2016 YPO2388 0eb4c69663ccc909a2a47ab988a6459b 310 Gene3D G3DSA:1.10.10.10 7 88 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2388 0eb4c69663ccc909a2a47ab988a6459b 310 SUPERFAMILY SSF53850 89 292 2.48E-31 T 22-04-2016 YPO2388 0eb4c69663ccc909a2a47ab988a6459b 310 PANTHER PTHR30126:SF18 1 306 1.6E-188 T 22-04-2016 YPO2388 0eb4c69663ccc909a2a47ab988a6459b 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 9.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2388 0eb4c69663ccc909a2a47ab988a6459b 310 Pfam PF03466 LysR substrate binding domain 88 291 1.4E-27 T 22-04-2016 IPR005119 LysR, substrate-binding YPO2388 0eb4c69663ccc909a2a47ab988a6459b 310 Gene3D G3DSA:3.40.190.10 89 173 9.2E-11 T 22-04-2016 YPO2388 0eb4c69663ccc909a2a47ab988a6459b 310 SUPERFAMILY SSF46785 7 88 2.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2388 0eb4c69663ccc909a2a47ab988a6459b 310 PANTHER PTHR30126 1 306 1.6E-188 T 22-04-2016 YPO2066 d252454061352ac6954406fe2a51465d 491 PIRSF PIRSF000110 1 491 1.3E-181 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 SUPERFAMILY SSF55347 176 488 5.56E-113 T 22-04-2016 YPO2066 d252454061352ac6954406fe2a51465d 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 1.3E-115 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 PANTHER PTHR23429 1 489 2.3E-229 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 Gene3D G3DSA:3.40.50.720 7 185 9.5E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2066 d252454061352ac6954406fe2a51465d 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 91.102 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 Gene3D G3DSA:3.30.360.10 186 487 1.2E-121 T 22-04-2016 YPO2066 d252454061352ac6954406fe2a51465d 491 SUPERFAMILY SSF51735 4 189 2.17E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2066 d252454061352ac6954406fe2a51465d 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 5.6E-58 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 PANTHER PTHR23429:SF0 1 489 2.3E-229 T 22-04-2016 YPO2066 d252454061352ac6954406fe2a51465d 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 3.7E-199 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 7.0E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 7.0E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 7.0E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 7.0E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO2066 d252454061352ac6954406fe2a51465d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 7.0E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YPO0955 7c055fe05f174e0c86e8c26a3ca75e3e 366 Pfam PF01497 Periplasmic binding protein 74 308 5.8E-22 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPO0955 7c055fe05f174e0c86e8c26a3ca75e3e 366 Gene3D G3DSA:3.40.50.1980 33 173 1.2E-15 T 22-04-2016 YPO0955 7c055fe05f174e0c86e8c26a3ca75e3e 366 SUPERFAMILY SSF53807 19 334 8.63E-47 T 22-04-2016 YPO0955 7c055fe05f174e0c86e8c26a3ca75e3e 366 PANTHER PTHR30535:SF5 19 365 1.8E-85 T 22-04-2016 YPO0955 7c055fe05f174e0c86e8c26a3ca75e3e 366 PANTHER PTHR30535 19 365 1.8E-85 T 22-04-2016 YPO0955 7c055fe05f174e0c86e8c26a3ca75e3e 366 Gene3D G3DSA:3.40.50.1980 179 332 1.2E-21 T 22-04-2016 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 SUPERFAMILY SSF55021 9 58 2.54E-8 T 22-04-2016 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 Gene3D G3DSA:3.30.70.260 7 75 7.1E-12 T 22-04-2016 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 41.846 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 SUPERFAMILY SSF53328 88 265 8.11E-58 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 Pfam PF00551 Formyl transferase 88 264 4.2E-53 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 Pfam PF01842 ACT domain 10 70 5.3E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 PANTHER PTHR10520 15 274 6.4E-128 T 22-04-2016 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 PIRSF PIRSF036480 6 283 3.1E-109 T 22-04-2016 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 268 3.2E-121 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 Gene3D G3DSA:3.40.50.170 88 265 2.4E-55 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 PANTHER PTHR10520:SF7 15 274 6.4E-128 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 2.2E-54 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 2.2E-54 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 2.2E-54 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 2.2E-54 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPO2171 ca90ff51fbdd09922f65165cd5ae0115 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 2.2E-54 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 PANTHER PTHR21256 1 204 1.2E-121 T 22-04-2016 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 3.2E-31 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 7.8E-16 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.275 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 3.0E-26 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 SUPERFAMILY SSF141734 5 122 1.11E-46 T 22-04-2016 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 SUPERFAMILY SSF101386 114 202 2.4E-23 T 22-04-2016 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.667 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 PANTHER PTHR21256:SF16 1 204 1.2E-121 T 22-04-2016 YPO1542 a1c88ee338198b93c5f31b8d874eba09 204 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 197 9.3E-30 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 YPO0898 ab53097c5e6ce2c43d34b3b4e442edb8 330 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 323 50.893 T 22-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 YPO0898 ab53097c5e6ce2c43d34b3b4e442edb8 330 SUPERFAMILY SSF101790 245 326 2.68E-26 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPO0898 ab53097c5e6ce2c43d34b3b4e442edb8 330 PANTHER PTHR22602 1 319 1.1E-82 T 22-04-2016 YPO0898 ab53097c5e6ce2c43d34b3b4e442edb8 330 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 188 253 2.2E-26 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site YPO0898 ab53097c5e6ce2c43d34b3b4e442edb8 330 PANTHER PTHR22602:SF0 1 319 1.1E-82 T 22-04-2016 YPO0898 ab53097c5e6ce2c43d34b3b4e442edb8 330 Gene3D G3DSA:3.30.70.1400 28 113 9.1E-32 T 22-04-2016 YPO0898 ab53097c5e6ce2c43d34b3b4e442edb8 330 SUPERFAMILY SSF103025 19 243 3.14E-65 T 22-04-2016 YPO0898 ab53097c5e6ce2c43d34b3b4e442edb8 330 Pfam PF01571 Aminomethyltransferase folate-binding domain 32 181 1.1E-7 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal YPO0582 ae4821833333181d0aa87d098c99ab84 176 Pfam PF10688 Bacterial inner membrane protein 5 162 1.1E-52 T 22-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV YPO0582 ae4821833333181d0aa87d098c99ab84 176 PIRSF PIRSF011443 1 176 2.0E-60 T 22-04-2016 IPR026267 Inner membrane protein YgjV YPO0468 7eb2513d376e655a2ec202a11ca79369 636 SUPERFAMILY SSF100920 384 540 1.96E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YPO0468 7eb2513d376e655a2ec202a11ca79369 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPO0468 7eb2513d376e655a2ec202a11ca79369 636 SUPERFAMILY SSF100934 535 608 3.73E-6 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PANTHER PTHR19375 2 636 0.0 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Pfam PF00012 Hsp70 protein 4 602 1.9E-265 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 SUPERFAMILY SSF53067 4 183 9.39E-66 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.915 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.420.40 319 361 2.8E-33 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.420.40 197 229 2.8E-33 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 4.5E-291 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:1.20.1270.10 532 601 7.5E-27 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PANTHER PTHR19375:SF173 2 636 0.0 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:2.60.34.10 390 531 7.3E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.90.640.10 230 315 6.3E-32 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 469 485 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 388 407 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 334 350 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 198 208 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 PRINTS PR00301 70kDa heat shock protein signature 365 385 3.0E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.30.30 53 108 2.4E-27 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 SUPERFAMILY SSF53067 187 382 8.43E-68 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.420.40 119 196 1.1E-63 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 Gene3D G3DSA:3.30.420.40 4 52 1.1E-63 T 22-04-2016 YPO0468 7eb2513d376e655a2ec202a11ca79369 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 Gene3D G3DSA:1.10.1140.10 345 460 1.0E-56 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 Gene3D G3DSA:2.40.10.170 2 75 2.6E-31 T 22-04-2016 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.4E-262 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.822 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 SUPERFAMILY SSF52540 77 348 1.24E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 SUPERFAMILY SSF47917 345 459 2.09E-55 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 Gene3D G3DSA:3.40.50.300 77 343 2.2E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 SMART SM00382 142 405 1.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 SUPERFAMILY SSF50615 1 75 2.56E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 PANTHER PTHR15184 1 460 0.0 T 22-04-2016 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 2.0E-21 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 PANTHER PTHR15184:SF44 1 460 0.0 T 22-04-2016 YPO4121 2b32ffa9c31bb7bae135c232a781652c 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.2E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO0250 b795c75fef443e6943999c329b66610e 330 Pfam PF12715 Abhydrolase family 10 286 5.6E-18 T 22-04-2016 IPR025890 Abhydrolase, bacterial YPO0250 b795c75fef443e6943999c329b66610e 330 PANTHER PTHR17630 260 288 5.6E-17 T 22-04-2016 YPO0250 b795c75fef443e6943999c329b66610e 330 PANTHER PTHR17630 59 85 5.6E-17 T 22-04-2016 YPO0250 b795c75fef443e6943999c329b66610e 330 PANTHER PTHR17630 110 226 5.6E-17 T 22-04-2016 YPO0250 b795c75fef443e6943999c329b66610e 330 SUPERFAMILY SSF53474 109 330 5.59E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0250 b795c75fef443e6943999c329b66610e 330 SUPERFAMILY SSF53474 42 84 5.59E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0250 b795c75fef443e6943999c329b66610e 330 Gene3D G3DSA:3.40.50.1820 12 330 7.4E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1069 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 SUPERFAMILY SSF118196 1 230 4.58E-86 T 22-04-2016 IPR023370 TsaA-like domain YPO1069 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 2.5E-57 T 22-04-2016 IPR023370 TsaA-like domain YPO1069 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 1.5E-40 T 22-04-2016 IPR023370 TsaA-like domain YPO1069 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 PANTHER PTHR12818:SF6 1 235 6.2E-147 T 22-04-2016 YPO1069 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site YPO1069 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 PANTHER PTHR12818 1 235 6.2E-147 T 22-04-2016 YPO1069 8a1ef0ba2ced73fdcb9d2ca4f5b61bd9 235 Gene3D G3DSA:2.40.30.70 5 157 6.4E-52 T 22-04-2016 IPR023370 TsaA-like domain YPO0210 c59cc932dc0db3057b44a97bb65e01eb 209 Gene3D G3DSA:4.10.960.10 77 157 4.7E-35 T 22-04-2016 YPO0210 c59cc932dc0db3057b44a97bb65e01eb 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.4E-92 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0210 c59cc932dc0db3057b44a97bb65e01eb 209 Pfam PF00297 Ribosomal protein L3 94 182 1.2E-12 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0210 c59cc932dc0db3057b44a97bb65e01eb 209 SUPERFAMILY SSF50447 1 208 2.38E-80 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO0210 c59cc932dc0db3057b44a97bb65e01eb 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.005 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0210 c59cc932dc0db3057b44a97bb65e01eb 209 PANTHER PTHR11229 1 208 2.8E-124 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0210 c59cc932dc0db3057b44a97bb65e01eb 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site YPO0210 c59cc932dc0db3057b44a97bb65e01eb 209 Gene3D G3DSA:2.40.30.10 158 207 8.1E-8 T 22-04-2016 YPO0210 c59cc932dc0db3057b44a97bb65e01eb 209 Gene3D G3DSA:2.40.30.10 3 32 8.1E-8 T 22-04-2016 YPO2568 b28b4d603034cca7be45933a40f119d5 344 Gene3D G3DSA:3.40.50.2300 62 184 5.2E-29 T 22-04-2016 YPO2568 b28b4d603034cca7be45933a40f119d5 344 SMART SM00354 12 82 7.1E-29 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2568 b28b4d603034cca7be45933a40f119d5 344 SUPERFAMILY SSF53822 70 324 2.12E-42 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO2568 b28b4d603034cca7be45933a40f119d5 344 Gene3D G3DSA:3.40.50.2300 185 343 4.4E-36 T 22-04-2016 YPO2568 b28b4d603034cca7be45933a40f119d5 344 PANTHER PTHR30146:SF33 12 344 1.8E-247 T 22-04-2016 YPO2568 b28b4d603034cca7be45933a40f119d5 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2568 b28b4d603034cca7be45933a40f119d5 344 Pfam PF13377 Periplasmic binding protein-like domain 179 328 2.8E-26 T 22-04-2016 YPO2568 b28b4d603034cca7be45933a40f119d5 344 Gene3D G3DSA:1.10.260.40 11 61 9.0E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2568 b28b4d603034cca7be45933a40f119d5 344 PANTHER PTHR30146 12 344 1.8E-247 T 22-04-2016 YPO2568 b28b4d603034cca7be45933a40f119d5 344 SUPERFAMILY SSF47413 12 70 1.35E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2568 b28b4d603034cca7be45933a40f119d5 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 4.8E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 Gene3D G3DSA:2.30.110.10 21 217 1.2E-82 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 9.6E-19 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 PANTHER PTHR10851 1 217 3.4E-116 T 22-04-2016 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 PIRSF PIRSF000190 1 217 3.2E-82 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 SUPERFAMILY SSF50475 20 217 4.86E-67 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 38.3 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 121 1.2E-22 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 217 2.8E-95 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO2370 d77a9a01a0983fe1d9a37a8de75087d0 217 PANTHER PTHR10851:SF0 1 217 3.4E-116 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO3862 3dbc32bd5c14cdcc690f723a4cd724f5 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 5.7E-159 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YPO3862 3dbc32bd5c14cdcc690f723a4cd724f5 355 PANTHER PTHR10366:SF41 3 354 1.9E-184 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YPO3862 3dbc32bd5c14cdcc690f723a4cd724f5 355 SUPERFAMILY SSF51735 3 339 4.6E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3862 3dbc32bd5c14cdcc690f723a4cd724f5 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 4.4E-98 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3862 3dbc32bd5c14cdcc690f723a4cd724f5 355 Gene3D G3DSA:3.40.50.720 2 192 1.3E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3862 3dbc32bd5c14cdcc690f723a4cd724f5 355 PANTHER PTHR10366 3 354 1.9E-184 T 22-04-2016 YPO3862 3dbc32bd5c14cdcc690f723a4cd724f5 355 Gene3D G3DSA:3.90.25.10 193 341 2.5E-56 T 22-04-2016 YPO3879 2efc86a0424d6cc9983f2edaf8d1abeb 875 Pfam PF13953 PapC C-terminal domain 797 857 1.0E-17 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPO3879 2efc86a0424d6cc9983f2edaf8d1abeb 875 Pfam PF13954 PapC N-terminal domain 42 203 2.8E-36 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPO3879 2efc86a0424d6cc9983f2edaf8d1abeb 875 PANTHER PTHR30451 7 581 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO3879 2efc86a0424d6cc9983f2edaf8d1abeb 875 PANTHER PTHR30451 601 875 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO3879 2efc86a0424d6cc9983f2edaf8d1abeb 875 SUPERFAMILY SSF141729 41 180 2.09E-24 T 22-04-2016 YPO3879 2efc86a0424d6cc9983f2edaf8d1abeb 875 PANTHER PTHR30451:SF7 7 581 0.0 T 22-04-2016 YPO3879 2efc86a0424d6cc9983f2edaf8d1abeb 875 PANTHER PTHR30451:SF7 601 875 0.0 T 22-04-2016 YPO3879 2efc86a0424d6cc9983f2edaf8d1abeb 875 Pfam PF00577 Outer membrane usher protein 222 788 2.7E-140 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO3879 2efc86a0424d6cc9983f2edaf8d1abeb 875 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 335 345 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 Gene3D G3DSA:1.10.1060.10 25 108 5.7E-16 T 22-04-2016 YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 PANTHER PTHR32479 22 426 9.9E-210 T 22-04-2016 YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 Pfam PF02754 Cysteine-rich domain 186 272 3.5E-14 T 22-04-2016 IPR004017 Cysteine-rich domain YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 Pfam PF02754 Cysteine-rich domain 328 411 1.3E-13 T 22-04-2016 IPR004017 Cysteine-rich domain YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 SUPERFAMILY SSF46548 28 104 7.67E-16 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 Pfam PF13183 4Fe-4S dicluster domain 29 93 9.9E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 26 430 2.6E-231 T 22-04-2016 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 UniPathway: UPA00618 YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 79 90 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 32 43 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3824 ed642a7c4bc603ac2952b5a23f1ef0e0 431 PANTHER PTHR32479:SF9 22 426 9.9E-210 T 22-04-2016 YPO1315 3524823285fc3b9a57a9d2a70fcdf0ea 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 4.1E-24 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 YPO1315 3524823285fc3b9a57a9d2a70fcdf0ea 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 198 2.3E-48 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial YPO1315 3524823285fc3b9a57a9d2a70fcdf0ea 216 Gene3D G3DSA:3.40.50.1000 80 216 4.9E-39 T 22-04-2016 IPR023214 HAD-like domain YPO1315 3524823285fc3b9a57a9d2a70fcdf0ea 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 3.0E-34 T 22-04-2016 YPO1315 3524823285fc3b9a57a9d2a70fcdf0ea 216 PANTHER PTHR10000:SF10 1 213 6.0E-123 T 22-04-2016 YPO1315 3524823285fc3b9a57a9d2a70fcdf0ea 216 SUPERFAMILY SSF56784 1 206 9.39E-28 T 22-04-2016 IPR023214 HAD-like domain YPO1315 3524823285fc3b9a57a9d2a70fcdf0ea 216 Gene3D G3DSA:1.20.1440.100 16 79 4.2E-17 T 22-04-2016 YPO1315 3524823285fc3b9a57a9d2a70fcdf0ea 216 PANTHER PTHR10000 1 213 6.0E-123 T 22-04-2016 YPO2396 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2396 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2396 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2396 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2396 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2396 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2396 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2396 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1623 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1623 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1623 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1623 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1623 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1623 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1623 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1623 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2026 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2026 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2026 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2026 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2026 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2026 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2026 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2026 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3434 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3434 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3434 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3434 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3434 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3434 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3434 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3434 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0826 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0826 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0826 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0826 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0826 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0826 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0826 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0826 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1900 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1900 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1900 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1900 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1900 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1900 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1900 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1900 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0924 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0924 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0924 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0924 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0924 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0924 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0924 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0924 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3774 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3774 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3774 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3774 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3774 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3774 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3774 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3774 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3701 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3701 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3701 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3701 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3701 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3701 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3701 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3701 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0171 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0171 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0171 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0171 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0171 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0171 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0171 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0171 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0528 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0528 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0528 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0528 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0528 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0528 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0528 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0528 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0780 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0780 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0780 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0780 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0780 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0780 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0780 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0780 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3251 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3251 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3251 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3251 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3251 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3251 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3251 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3251 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1692 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1692 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1692 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1692 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1692 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1692 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1692 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1692 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0567 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0567 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0567 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0567 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0567 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0567 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0567 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0567 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2178 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2178 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2178 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2178 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2178 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2178 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2178 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2178 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2643 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2643 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2643 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2643 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2643 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2643 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2643 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2643 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0031 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0031 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0031 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0031 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0031 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0031 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0031 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0031 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1729 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1729 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1729 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1729 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1729 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1729 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1729 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1729 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3542 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3542 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3542 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3542 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3542 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3542 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3542 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3542 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1427 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1427 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1427 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1427 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1427 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1427 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1427 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1427 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2721 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2721 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2721 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2721 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2721 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2721 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2721 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2721 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1132 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1132 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1132 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1132 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1132 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1132 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1132 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1132 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2932 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2932 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2932 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2932 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2932 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2932 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2932 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2932 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1013 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1013 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1013 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1013 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1013 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1013 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1013 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1013 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1086 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1086 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1086 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1086 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1086 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1086 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1086 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1086 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3282 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3282 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3282 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3282 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3282 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3282 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3282 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3282 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2516 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2516 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2516 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2516 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2516 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2516 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2516 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2516 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0637 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0637 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0637 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0637 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0637 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0637 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0637 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0637 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2085 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2085 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2085 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2085 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2085 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2085 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2085 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2085 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1520 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1520 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1520 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1520 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1520 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1520 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1520 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1520 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO4010 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO4010 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO4010 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO4010 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO4010 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO4010 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO4010 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO4010 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3591 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3591 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3591 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3591 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3591 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3591 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3591 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3591 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1750 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1750 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1750 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1750 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1750 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1750 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1750 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1750 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2365 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2365 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2365 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2365 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2365 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2365 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2365 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2365 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3756 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3756 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3756 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3756 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3756 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3756 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3756 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3756 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1338 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1338 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1338 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1338 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1338 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1338 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1338 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1338 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2808 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO2808 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2808 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2808 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2808 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO2808 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2808 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO2808 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3209 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3209 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3209 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3209 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3209 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3209 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3209 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3209 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0386 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0386 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0386 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0386 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0386 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0386 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0386 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0386 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0249 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO0249 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0249 009be5cb7decd0e67d576b9d27b64a1b 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0249 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0249 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO0249 009be5cb7decd0e67d576b9d27b64a1b 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0249 009be5cb7decd0e67d576b9d27b64a1b 340 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO0249 009be5cb7decd0e67d576b9d27b64a1b 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2492 fde907190ed3850acc07eee7834a4199 321 SUPERFAMILY SSF52343 106 227 4.45E-24 T 22-04-2016 YPO2492 fde907190ed3850acc07eee7834a4199 321 PANTHER PTHR19370:SF113 3 245 2.6E-99 T 22-04-2016 YPO2492 fde907190ed3850acc07eee7834a4199 321 Gene3D G3DSA:3.40.50.80 106 221 1.9E-24 T 22-04-2016 YPO2492 fde907190ed3850acc07eee7834a4199 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPO2492 fde907190ed3850acc07eee7834a4199 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 1.5E-25 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPO2492 fde907190ed3850acc07eee7834a4199 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 1.5E-25 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPO2492 fde907190ed3850acc07eee7834a4199 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 1.5E-25 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPO2492 fde907190ed3850acc07eee7834a4199 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 1.5E-25 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPO2492 fde907190ed3850acc07eee7834a4199 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 1.5E-25 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPO2492 fde907190ed3850acc07eee7834a4199 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 94 108 1.5E-25 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 YPO2492 fde907190ed3850acc07eee7834a4199 321 Gene3D G3DSA:3.10.20.30 222 319 9.4E-23 T 22-04-2016 IPR012675 Beta-grasp domain YPO2492 fde907190ed3850acc07eee7834a4199 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 241 312 3.2E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO2492 fde907190ed3850acc07eee7834a4199 321 Pfam PF00175 Oxidoreductase NAD-binding domain 117 206 3.7E-5 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPO2492 fde907190ed3850acc07eee7834a4199 321 Gene3D G3DSA:2.40.30.10 4 104 9.8E-27 T 22-04-2016 YPO2492 fde907190ed3850acc07eee7834a4199 321 SUPERFAMILY SSF54292 216 319 1.31E-22 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO2492 fde907190ed3850acc07eee7834a4199 321 SUPERFAMILY SSF63380 3 104 1.51E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO2492 fde907190ed3850acc07eee7834a4199 321 PANTHER PTHR19370 3 245 2.6E-99 T 22-04-2016 YPO2492 fde907190ed3850acc07eee7834a4199 321 Pfam PF00970 Oxidoreductase FAD-binding domain 9 103 1.5E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPO0380 649f3d373f1715be0e78e8b04c568889 844 SMART SM00955 260 588 8.3E-183 T 22-04-2016 YPO0380 649f3d373f1715be0e78e8b04c568889 844 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 57.155 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 YPO0380 649f3d373f1715be0e78e8b04c568889 844 PANTHER PTHR23355:SF9 1 815 0.0 T 22-04-2016 YPO0380 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 138 236 3.62E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0380 649f3d373f1715be0e78e8b04c568889 844 Pfam PF00575 S1 RNA binding domain 642 724 1.2E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO0380 649f3d373f1715be0e78e8b04c568889 844 Pfam PF00773 RNB domain 260 587 1.2E-105 T 22-04-2016 YPO0380 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 222 642 4.63E-141 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0380 649f3d373f1715be0e78e8b04c568889 844 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 4.7E-276 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 YPO0380 649f3d373f1715be0e78e8b04c568889 844 Pfam PF08206 Ribonuclease B OB domain 87 144 3.7E-22 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain YPO0380 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 67 145 3.82E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0380 649f3d373f1715be0e78e8b04c568889 844 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 3.5E-270 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 YPO0380 649f3d373f1715be0e78e8b04c568889 844 Gene3D G3DSA:2.40.50.140 645 735 3.9E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0380 649f3d373f1715be0e78e8b04c568889 844 SMART SM00316 643 726 3.4E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO0380 649f3d373f1715be0e78e8b04c568889 844 SMART SM00316 80 142 12.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO0380 649f3d373f1715be0e78e8b04c568889 844 SMART SM00357 86 145 2.7E-16 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO0380 649f3d373f1715be0e78e8b04c568889 844 SUPERFAMILY SSF50249 645 725 8.01E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0380 649f3d373f1715be0e78e8b04c568889 844 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 1.1E-16 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain YPO0380 649f3d373f1715be0e78e8b04c568889 844 PANTHER PTHR23355 1 815 0.0 T 22-04-2016 YPO0725 878a2132b5096452982b42c0fd8273f6 413 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPO0725 878a2132b5096452982b42c0fd8273f6 413 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 340 410 4.9E-16 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0725 878a2132b5096452982b42c0fd8273f6 413 PANTHER PTHR30435:SF1 1 117 3.9E-74 T 22-04-2016 YPO0725 878a2132b5096452982b42c0fd8273f6 413 PANTHER PTHR30435:SF1 291 412 3.9E-74 T 22-04-2016 YPO0725 878a2132b5096452982b42c0fd8273f6 413 Pfam PF00460 Flagella basal body rod protein 4 33 4.1E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO0725 878a2132b5096452982b42c0fd8273f6 413 Pfam PF07559 Flagellar basal body protein FlaE 170 294 2.9E-19 T 22-04-2016 IPR011491 Flagellar hook protein FlgE YPO0725 878a2132b5096452982b42c0fd8273f6 413 PANTHER PTHR30435 1 117 3.9E-74 T 22-04-2016 YPO0725 878a2132b5096452982b42c0fd8273f6 413 PANTHER PTHR30435 291 412 3.9E-74 T 22-04-2016 YPO0725 878a2132b5096452982b42c0fd8273f6 413 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 395 5.6E-96 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO0725 878a2132b5096452982b42c0fd8273f6 413 SUPERFAMILY SSF117143 73 374 6.8E-74 T 22-04-2016 YPO3293 9db0890cf84c80cd7849017cf3213fb0 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 119.798 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPO3293 9db0890cf84c80cd7849017cf3213fb0 246 PANTHER PTHR32125 1 228 1.7E-124 T 22-04-2016 YPO3293 9db0890cf84c80cd7849017cf3213fb0 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 1.9E-110 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPO3293 9db0890cf84c80cd7849017cf3213fb0 246 PIRSF PIRSF000386 1 245 7.4E-102 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPO3293 9db0890cf84c80cd7849017cf3213fb0 246 SUPERFAMILY SSF75217 1 244 3.53E-102 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPO3293 9db0890cf84c80cd7849017cf3213fb0 246 PANTHER PTHR32125:SF1 1 228 1.7E-124 T 22-04-2016 YPO3293 9db0890cf84c80cd7849017cf3213fb0 246 Gene3D G3DSA:1.10.1270.20 161 244 4.9E-36 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPO3293 9db0890cf84c80cd7849017cf3213fb0 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 4.6E-70 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YPO3293 9db0890cf84c80cd7849017cf3213fb0 246 Gene3D G3DSA:3.40.1280.10 1 160 3.5E-67 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO1667 15ac4a7cf7dffc1a67c706f026124ff7 165 Pfam PF01584 CheW-like domain 18 154 2.2E-37 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPO1667 15ac4a7cf7dffc1a67c706f026124ff7 165 PANTHER PTHR22617 1 165 2.6E-57 T 22-04-2016 YPO1667 15ac4a7cf7dffc1a67c706f026124ff7 165 Gene3D G3DSA:2.40.50.180 56 92 1.6E-10 T 22-04-2016 YPO1667 15ac4a7cf7dffc1a67c706f026124ff7 165 SUPERFAMILY SSF50341 17 158 2.09E-39 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPO1667 15ac4a7cf7dffc1a67c706f026124ff7 165 Gene3D G3DSA:2.30.30.40 93 144 7.0E-9 T 22-04-2016 YPO1667 15ac4a7cf7dffc1a67c706f026124ff7 165 SMART SM00260 14 151 4.8E-43 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPO3850 bbf9097515f883443376dc71079528be 249 Gene3D G3DSA:3.40.50.10090 123 247 1.6E-10 T 22-04-2016 YPO3850 bbf9097515f883443376dc71079528be 249 PANTHER PTHR38042:SF1 1 248 2.3E-91 T 22-04-2016 YPO3850 bbf9097515f883443376dc71079528be 249 Gene3D G3DSA:3.40.50.10090 5 114 9.3E-11 T 22-04-2016 YPO3850 bbf9097515f883443376dc71079528be 249 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 7.3E-45 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3850 bbf9097515f883443376dc71079528be 249 SUPERFAMILY SSF69618 1 247 1.44E-56 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3850 bbf9097515f883443376dc71079528be 249 PANTHER PTHR38042 1 248 2.3E-91 T 22-04-2016 YPO3047 3acbd16af9040f570c302bd22f390741 557 Pfam PF00884 Sulfatase 58 407 1.9E-93 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPO3047 3acbd16af9040f570c302bd22f390741 557 ProSitePatterns PS00523 Sulfatases signature 1. 130 142 - T 22-04-2016 IPR024607 Sulfatase, conserved site YPO3047 3acbd16af9040f570c302bd22f390741 557 PANTHER PTHR10342:SF199 214 557 5.4E-141 T 22-04-2016 YPO3047 3acbd16af9040f570c302bd22f390741 557 PANTHER PTHR10342:SF199 53 71 5.4E-141 T 22-04-2016 YPO3047 3acbd16af9040f570c302bd22f390741 557 PANTHER PTHR10342:SF199 99 186 5.4E-141 T 22-04-2016 YPO3047 3acbd16af9040f570c302bd22f390741 557 PANTHER PTHR10342 214 557 5.4E-141 T 22-04-2016 YPO3047 3acbd16af9040f570c302bd22f390741 557 PANTHER PTHR10342 53 71 5.4E-141 T 22-04-2016 YPO3047 3acbd16af9040f570c302bd22f390741 557 PANTHER PTHR10342 99 186 5.4E-141 T 22-04-2016 YPO3047 3acbd16af9040f570c302bd22f390741 557 Gene3D G3DSA:3.30.1120.10 455 539 1.4E-8 T 22-04-2016 YPO3047 3acbd16af9040f570c302bd22f390741 557 ProSitePatterns PS00149 Sulfatases signature 2. 175 185 - T 22-04-2016 IPR024607 Sulfatase, conserved site YPO3047 3acbd16af9040f570c302bd22f390741 557 Gene3D G3DSA:3.40.720.10 57 436 1.2E-94 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO3047 3acbd16af9040f570c302bd22f390741 557 SUPERFAMILY SSF53649 479 533 1.89E-95 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO3047 3acbd16af9040f570c302bd22f390741 557 SUPERFAMILY SSF53649 109 443 1.89E-95 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO3047 3acbd16af9040f570c302bd22f390741 557 SUPERFAMILY SSF53649 57 76 1.89E-95 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO2903 cec1f24e83f5090f01eb7aca30558e5f 453 SUPERFAMILY SSF63520 258 359 1.7E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 YPO2903 cec1f24e83f5090f01eb7aca30558e5f 453 Pfam PF00874 PRD domain 266 355 8.5E-16 T 22-04-2016 IPR011608 PRD domain GO:0006355 YPO2903 cec1f24e83f5090f01eb7aca30558e5f 453 PANTHER PTHR30185:SF4 16 110 4.7E-12 T 22-04-2016 YPO2903 cec1f24e83f5090f01eb7aca30558e5f 453 PANTHER PTHR30185:SF4 141 355 4.7E-12 T 22-04-2016 YPO2903 cec1f24e83f5090f01eb7aca30558e5f 453 PANTHER PTHR30185 16 110 4.7E-12 T 22-04-2016 YPO2903 cec1f24e83f5090f01eb7aca30558e5f 453 PANTHER PTHR30185 141 355 4.7E-12 T 22-04-2016 YPO2903 cec1f24e83f5090f01eb7aca30558e5f 453 Gene3D G3DSA:1.10.1790.10 259 357 1.4E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 YPO1671 cdee5b8d5ff45e2705aa245b876aa973 225 Pfam PF13309 HTH domain 159 216 6.4E-12 T 22-04-2016 YPO1671 cdee5b8d5ff45e2705aa245b876aa973 225 Pfam PF08348 YheO-like PAS domain 21 130 5.4E-34 T 22-04-2016 IPR013559 YheO-like YPO1671 cdee5b8d5ff45e2705aa245b876aa973 225 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 20 122 2.0E-57 T 22-04-2016 IPR013559 YheO-like YPO1671 cdee5b8d5ff45e2705aa245b876aa973 225 PANTHER PTHR35568 2 225 2.3E-164 T 22-04-2016 YPO1671 cdee5b8d5ff45e2705aa245b876aa973 225 PANTHER PTHR35568:SF2 2 225 2.3E-164 T 22-04-2016 YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 590 7.0E-142 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 582 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 457 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 347 357 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 545 563 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 PRINTS PR00811 Bacterial general secretion pathway protein D signature 412 436 2.1E-35 T 22-04-2016 IPR001775 GspD/PilQ family YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 Pfam PF03958 Bacterial type II/III secretion system short domain 131 191 3.3E-10 T 22-04-2016 IPR005644 NolW-like YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 Pfam PF03958 Bacterial type II/III secretion system short domain 196 265 5.2E-9 T 22-04-2016 IPR005644 NolW-like YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 Pfam PF03958 Bacterial type II/III secretion system short domain 270 347 2.0E-14 T 22-04-2016 IPR005644 NolW-like YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 PANTHER PTHR30332 1 640 0.0 T 22-04-2016 YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 Pfam PF00263 Bacterial type II and III secretion system protein 416 581 3.3E-50 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 PANTHER PTHR30332:SF3 1 640 0.0 T 22-04-2016 YPO0816 9fd6e5b55e275bf2e8c5d95c76b5886d 640 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 526 559 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF53474 2898 3152 2.85E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF00975 Thioesterase domain 2915 3006 2.7E-20 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 844 1.5E-78 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:1.10.1200.10 2828 2899 5.7E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF47336 1817 1928 7.85E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF00550 Phosphopantetheine attachment site 2832 2894 3.8E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF00550 Phosphopantetheine attachment site 1823 1889 4.0E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF52151 550 677 2.04E-60 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF52151 738 835 2.04E-60 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF53335 2575 2750 4.8E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.30.70.250 675 736 7.9E-4 T 22-04-2016 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF00668 Condensation domain 1916 2207 9.2E-41 T 22-04-2016 IPR001242 Condensation domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.50.150 2584 2746 7.2E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.50.150 1909 1940 7.2E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF08415 Nonribosomal peptide synthase 2232 2293 1.4E-16 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF00698 Acyl transferase domain 551 846 1.8E-52 T 22-04-2016 IPR014043 Acyl transferase YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SMART SM00825 Beta-ketoacyl synthase 29 452 1.8E-182 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF52777 2098 2343 9.23E-44 T 22-04-2016 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF51735 1365 1540 7.48E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SMART SM00823 Phosphopantetheine attachment site 2830 2898 0.0025 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SMART SM00823 Phosphopantetheine attachment site 1821 1893 8.8E-4 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 PANTHER PTHR11712 2929 3021 0.0 T 22-04-2016 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 PANTHER PTHR11712 14 1889 0.0 T 22-04-2016 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SMART SM00824 Thioesterase 2918 3152 6.1E-4 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.50.1820 2900 3011 9.0E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.50.1820 3085 3152 9.0E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.47.10 290 453 1.6E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 27 276 3.0E-74 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 404 515 1.4E-13 T 22-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 189 205 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF47336 2828 2894 1.44E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF08242 Methyltransferase domain 2593 2693 1.6E-16 T 22-04-2016 IPR013217 Methyltransferase type 12 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF08242 Methyltransferase domain 1093 1194 1.1E-20 T 22-04-2016 IPR013217 Methyltransferase type 12 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 PANTHER PTHR11712:SF288 2929 3021 0.0 T 22-04-2016 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 PANTHER PTHR11712:SF288 14 1889 0.0 T 22-04-2016 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF51735 1557 1786 2.7E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF55048 675 736 1.44E-6 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 401 1.2E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF53901 427 447 1.12E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF53901 23 143 1.12E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF53901 172 397 1.12E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.366.10 737 846 9.0E-64 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.366.10 546 671 9.0E-64 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.47.10 29 288 1.6E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF53335 1060 1250 1.36E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SUPERFAMILY SSF52777 1911 2109 1.89E-23 T 22-04-2016 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.50.720 1557 1745 6.5E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Pfam PF08659 KR domain 1560 1729 4.5E-37 T 22-04-2016 IPR013968 Polyketide synthase, ketoreductase domain YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:3.40.50.150 1049 1246 5.1E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1848 1863 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2853 2868 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1558 1731 5.1E-26 T 22-04-2016 YPO1910 e0c085733f77e99c6ca26c7e3841766d 3163 Gene3D G3DSA:1.10.1200.10 1819 1892 3.0E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0435 6773a5683317712754e88604aa9ce8f0 423 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 420 5.5E-154 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YPO0435 6773a5683317712754e88604aa9ce8f0 423 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 199 420 1.5E-75 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YPO0435 6773a5683317712754e88604aa9ce8f0 423 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 6 79 7.1E-23 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YPO0435 6773a5683317712754e88604aa9ce8f0 423 PANTHER PTHR10590 2 420 1.5E-217 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YPO0435 6773a5683317712754e88604aa9ce8f0 423 Pfam PF07670 Nucleoside recognition 97 193 4.4E-9 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YPO3874 83bd21ed62aa88999916d69fee8f2804 263 SUPERFAMILY SSF50969 27 255 1.37E-22 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like YPO3874 83bd21ed62aa88999916d69fee8f2804 263 PANTHER PTHR31270 1 260 3.4E-104 T 22-04-2016 YPO3874 83bd21ed62aa88999916d69fee8f2804 263 PANTHER PTHR31270:SF0 1 260 3.4E-104 T 22-04-2016 YPO3874 83bd21ed62aa88999916d69fee8f2804 263 Pfam PF05096 Glutamine cyclotransferase 27 259 1.6E-89 T 22-04-2016 IPR007788 Glutamine cyclotransferase YPO3874 83bd21ed62aa88999916d69fee8f2804 263 Gene3D G3DSA:2.130.10.10 35 250 1.2E-13 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPO4091 9ee4e6e42b250d571aaa4c07ae44ad33 221 PANTHER PTHR33795:SF1 47 221 9.9E-89 T 22-04-2016 YPO4091 9ee4e6e42b250d571aaa4c07ae44ad33 221 PANTHER PTHR33795 47 221 9.9E-89 T 22-04-2016 YPO4091 9ee4e6e42b250d571aaa4c07ae44ad33 221 Gene3D G3DSA:1.10.10.60 110 204 6.4E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO4091 9ee4e6e42b250d571aaa4c07ae44ad33 221 Pfam PF13518 Helix-turn-helix domain 58 103 5.9E-9 T 22-04-2016 YPO4091 9ee4e6e42b250d571aaa4c07ae44ad33 221 Pfam PF13518 Helix-turn-helix domain 113 165 5.3E-12 T 22-04-2016 YPO4091 9ee4e6e42b250d571aaa4c07ae44ad33 221 SUPERFAMILY SSF48295 40 103 4.34E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPO4091 9ee4e6e42b250d571aaa4c07ae44ad33 221 Gene3D G3DSA:1.10.10.10 55 102 6.7E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO4091 9ee4e6e42b250d571aaa4c07ae44ad33 221 SUPERFAMILY SSF46689 107 208 1.11E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3395 2b88d62c6c511a158f8a829639ca162e 191 PANTHER PTHR35561:SF1 1 183 1.9E-58 T 22-04-2016 YPO3395 2b88d62c6c511a158f8a829639ca162e 191 PANTHER PTHR35561 1 183 1.9E-58 T 22-04-2016 YPO3395 2b88d62c6c511a158f8a829639ca162e 191 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 12 181 21.466 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YPO3395 2b88d62c6c511a158f8a829639ca162e 191 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 13 181 1.7E-36 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YPO3395 2b88d62c6c511a158f8a829639ca162e 191 SUPERFAMILY SSF55144 13 183 6.28E-44 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YPO3395 2b88d62c6c511a158f8a829639ca162e 191 Pfam PF02834 LigT like Phosphoesterase 100 173 1.5E-6 T 22-04-2016 IPR014051 Phosphoesterase, HXTX YPO3395 2b88d62c6c511a158f8a829639ca162e 191 Pfam PF02834 LigT like Phosphoesterase 19 96 1.3E-11 T 22-04-2016 IPR014051 Phosphoesterase, HXTX YPO3395 2b88d62c6c511a158f8a829639ca162e 191 Gene3D G3DSA:3.90.1140.10 13 185 1.1E-49 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YPO2033 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO2033 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2033 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO2033 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2033 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2033 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1609 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO1609 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1609 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO1609 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1609 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1609 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3178 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3178 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3178 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3178 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3178 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3178 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0094 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO0094 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0094 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO0094 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0094 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0094 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3433 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3433 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3433 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3433 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3433 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3433 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2121 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO2121 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2121 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO2121 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2121 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2121 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1406 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO1406 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1406 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO1406 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1406 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1406 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0697 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO0697 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0697 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO0697 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0697 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0697 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2395 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO2395 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2395 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO2395 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2395 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2395 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2917 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO2917 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2917 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO2917 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2917 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2917 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3187 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3187 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3187 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3187 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3187 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3187 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3853 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3853 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3853 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3853 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3853 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3853 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1369 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO1369 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1369 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO1369 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1369 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1369 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3299 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3299 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3299 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3299 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3299 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3299 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3642 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3642 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3642 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3642 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3642 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3642 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2353 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO2353 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2353 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO2353 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2353 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2353 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0925 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO0925 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0925 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO0925 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0925 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0925 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3764 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3764 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3764 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3764 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3764 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3764 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3072 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3072 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3072 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3072 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3072 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3072 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3968 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3968 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3968 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3968 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3968 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3968 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1592 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO1592 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1592 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO1592 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1592 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1592 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0726 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO0726 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0726 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO0726 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0726 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0726 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2311 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO2311 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2311 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO2311 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2311 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2311 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3291 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO3291 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3291 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO3291 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3291 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3291 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1099 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO1099 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1099 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO1099 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1099 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1099 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0541 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO0541 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0541 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO0541 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0541 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0541 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2996 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO2996 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2996 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO2996 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2996 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2996 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1794 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360 2 145 1.3E-94 T 22-04-2016 YPO1794 fa7f2920242bb163ab85d39ddf12e5ab 152 SUPERFAMILY SSF143422 1 129 2.35E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1794 fa7f2920242bb163ab85d39ddf12e5ab 152 PANTHER PTHR33360:SF2 2 145 1.3E-94 T 22-04-2016 YPO1794 fa7f2920242bb163ab85d39ddf12e5ab 152 Gene3D G3DSA:3.30.70.1290 2 132 4.6E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1794 fa7f2920242bb163ab85d39ddf12e5ab 152 SMART SM01321 11 129 3.6E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1794 fa7f2920242bb163ab85d39ddf12e5ab 152 Pfam PF01797 Transposase IS200 like 12 129 1.0E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 SUPERFAMILY SSF52738 156 343 2.22E-75 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 PANTHER PTHR24421:SF21 3 349 1.3E-193 T 22-04-2016 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 Gene3D G3DSA:3.40.50.180 155 342 1.3E-85 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 SMART SM00448 4 119 2.6E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 SUPERFAMILY SSF52172 1 108 1.99E-27 T 22-04-2016 IPR011006 CheY-like superfamily YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 PANTHER PTHR24421 3 349 1.3E-193 T 22-04-2016 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 Pfam PF00072 Response regulator receiver domain 6 109 2.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 Pfam PF01339 CheB methylesterase 159 336 1.3E-62 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.328 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 Gene3D G3DSA:3.40.50.2300 2 108 1.2E-27 T 22-04-2016 YPO1679 89f839375ddeb026bc1b3f64350ec2b3 349 PIRSF PIRSF000876 1 346 1.1E-137 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YPO3156 46c7895dfe6201db242cd9810500d63b 423 SMART SM01086 317 412 4.5E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO3156 46c7895dfe6201db242cd9810500d63b 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 1.1E-212 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YPO3156 46c7895dfe6201db242cd9810500d63b 423 SUPERFAMILY SSF52540 63 402 7.64E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3156 46c7895dfe6201db242cd9810500d63b 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 22-04-2016 YPO3156 46c7895dfe6201db242cd9810500d63b 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 2.1E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO3156 46c7895dfe6201db242cd9810500d63b 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 5.5E-17 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO3156 46c7895dfe6201db242cd9810500d63b 423 SMART SM00994 12 51 1.0E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YPO3156 46c7895dfe6201db242cd9810500d63b 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 3.0E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YPO3156 46c7895dfe6201db242cd9810500d63b 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.371 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YPO3156 46c7895dfe6201db242cd9810500d63b 423 PANTHER PTHR11262 10 413 3.0E-257 T 22-04-2016 YPO3156 46c7895dfe6201db242cd9810500d63b 423 Gene3D G3DSA:3.40.50.300 66 253 1.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3156 46c7895dfe6201db242cd9810500d63b 423 Gene3D G3DSA:3.40.50.300 294 311 1.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3156 46c7895dfe6201db242cd9810500d63b 423 SMART SM00382 111 333 6.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3156 46c7895dfe6201db242cd9810500d63b 423 Gene3D G3DSA:1.10.8.60 316 413 3.1E-37 T 22-04-2016 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 PANTHER PTHR10066 1 592 0.0 T 22-04-2016 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 PANTHER PTHR10066 610 1054 0.0 T 22-04-2016 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 401 426 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Hamap MF_01687 Beta-galactosidase [lacZ]. 13 1059 17.764 T 22-04-2016 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 SUPERFAMILY SSF74650 772 1056 9.26E-92 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Pfam PF16353 Domain of unknown function(DUF4981) 655 743 2.3E-15 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Pfam PF02929 Beta galactosidase small chain 789 1054 2.4E-58 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Gene3D G3DSA:2.70.98.10 772 1056 5.1E-86 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Gene3D G3DSA:2.60.120.260 13 215 2.8E-85 T 22-04-2016 IPR008979 Galactose-binding domain-like YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Gene3D G3DSA:3.20.20.80 351 637 2.2E-113 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 351 644 1.3E-113 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Pfam PF00703 Glycosyl hydrolases family 2 228 349 4.0E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 SUPERFAMILY SSF49303 637 746 2.7E-28 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Gene3D G3DSA:2.60.40.320 641 746 2.8E-26 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 391 409 9.8E-38 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 463 478 9.8E-38 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 374 9.8E-38 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 154 169 9.8E-38 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 547 562 9.8E-38 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 SMART SM01038 784 1057 1.6E-118 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 463 477 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 PANTHER PTHR10066:SF72 1 592 0.0 T 22-04-2016 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 PANTHER PTHR10066:SF72 610 1054 0.0 T 22-04-2016 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 SUPERFAMILY SSF49303 228 349 1.64E-20 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 61 226 3.3E-64 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 SUPERFAMILY SSF51445 351 638 3.59E-99 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 Gene3D G3DSA:2.60.40.320 216 349 5.0E-30 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 YPO1654 069b691ca9e463e81959b6445d7c0acf 1060 SUPERFAMILY SSF49785 22 226 3.12E-70 T 22-04-2016 IPR008979 Galactose-binding domain-like YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 PANTHER PTHR10072:SF37 1 97 1.9E-94 T 22-04-2016 YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 PANTHER PTHR10072:SF37 147 188 1.9E-94 T 22-04-2016 YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 Gene3D G3DSA:2.60.300.12 1 97 8.3E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.4E-100 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.185 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 PANTHER PTHR10072 1 97 1.9E-94 T 22-04-2016 YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 PANTHER PTHR10072 147 188 1.9E-94 T 22-04-2016 YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 6.0E-28 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 Pfam PF01106 NifU-like domain 111 177 7.9E-20 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 SUPERFAMILY SSF117916 95 184 1.26E-23 T 22-04-2016 YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 SUPERFAMILY SSF89360 1 97 1.73E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO0127 6293ac96e9168f548dbd8f9f9e649b86 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 1.8E-12 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO4046 cb5aeb8f4b688021dac3cace8e5738a1 214 PANTHER PTHR33795 40 214 9.9E-89 T 22-04-2016 YPO4046 cb5aeb8f4b688021dac3cace8e5738a1 214 PANTHER PTHR33795:SF1 40 214 9.9E-89 T 22-04-2016 YPO4046 cb5aeb8f4b688021dac3cace8e5738a1 214 Pfam PF13518 Helix-turn-helix domain 106 158 5.0E-12 T 22-04-2016 YPO4046 cb5aeb8f4b688021dac3cace8e5738a1 214 Pfam PF13518 Helix-turn-helix domain 51 96 5.6E-9 T 22-04-2016 YPO4046 cb5aeb8f4b688021dac3cace8e5738a1 214 Gene3D G3DSA:1.10.10.10 48 95 6.3E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO4046 cb5aeb8f4b688021dac3cace8e5738a1 214 SUPERFAMILY SSF48295 33 96 4.08E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPO4046 cb5aeb8f4b688021dac3cace8e5738a1 214 Gene3D G3DSA:1.10.10.60 103 197 5.9E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO4046 cb5aeb8f4b688021dac3cace8e5738a1 214 SUPERFAMILY SSF46689 100 201 1.02E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 302 745 1.3E-177 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 SMART SM00481 18 85 1.4E-29 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 Pfam PF01336 OB-fold nucleic acid binding domain 1011 1082 1.6E-7 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 Gene3D G3DSA:2.40.50.140 994 1089 5.8E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 PANTHER PTHR32294 13 1171 0.0 T 22-04-2016 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 PANTHER PTHR32294:SF0 13 1171 0.0 T 22-04-2016 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 Gene3D G3DSA:3.20.20.140 17 267 2.4E-21 T 22-04-2016 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 Gene3D G3DSA:1.10.150.280 847 893 5.1E-6 T 22-04-2016 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 17 1042 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 SUPERFAMILY SSF89550 17 274 6.67E-18 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 Pfam PF02811 PHP domain 19 182 9.7E-44 T 22-04-2016 IPR004013 PHP domain GO:0003824 YPO1059 247b5fbb3f1e52cb33bbed792bc9b793 1171 Pfam PF14579 Helix-hairpin-helix motif 819 908 6.1E-25 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO3596 e494714a6d4d7c4b272aed509d1451f1 181 PANTHER PTHR37625:SF3 1 181 4.4E-124 T 22-04-2016 YPO3596 e494714a6d4d7c4b272aed509d1451f1 181 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 18 171 4.0E-36 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPO3596 e494714a6d4d7c4b272aed509d1451f1 181 PANTHER PTHR37625 1 181 4.4E-124 T 22-04-2016 YPO3596 e494714a6d4d7c4b272aed509d1451f1 181 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 174 7.2E-38 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPO1176 542038951e932867da91c35f4d8f8e3c 311 SUPERFAMILY SSF56601 3 281 1.84E-62 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO1176 542038951e932867da91c35f4d8f8e3c 311 PANTHER PTHR21581 13 310 8.1E-187 T 22-04-2016 YPO1176 542038951e932867da91c35f4d8f8e3c 311 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 265 4.7E-82 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YPO1176 542038951e932867da91c35f4d8f8e3c 311 PANTHER PTHR21581:SF8 13 310 8.1E-187 T 22-04-2016 YPO1176 542038951e932867da91c35f4d8f8e3c 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 2.5E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPO1176 542038951e932867da91c35f4d8f8e3c 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 2.5E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPO1176 542038951e932867da91c35f4d8f8e3c 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 2.5E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPO1176 542038951e932867da91c35f4d8f8e3c 311 Gene3D G3DSA:3.40.710.10 12 281 2.8E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 Pfam PF00571 CBS domain 242 296 4.6E-5 T 22-04-2016 IPR000644 CBS domain YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 Pfam PF01769 Divalent cation transporter 362 484 2.9E-23 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 SUPERFAMILY SSF158791 57 173 1.26E-22 T 22-04-2016 YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 TIGRFAM TIGR00400 mgtE: magnesium transporter 63 490 1.8E-77 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 SMART SM00924 75 178 3.4E-31 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 Gene3D G3DSA:1.25.60.10 50 169 5.4E-21 T 22-04-2016 YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 Gene3D G3DSA:1.10.357.20 320 490 2.0E-52 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 SUPERFAMILY SSF161093 319 490 1.28E-47 T 22-04-2016 YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 SUPERFAMILY SSF54631 177 316 1.3E-24 T 22-04-2016 YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 Gene3D G3DSA:3.10.580.10 170 300 1.6E-15 T 22-04-2016 YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 PANTHER PTHR11911:SF23 155 471 1.0E-43 T 22-04-2016 YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 Pfam PF03448 MgtE intracellular N domain 75 175 5.0E-23 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain YPO2839 370f2351a8f3fe8206c61b7187c3b58e 491 PANTHER PTHR11911 155 471 1.0E-43 T 22-04-2016 YPO0024 3ef70901c361257cfd740054cf84ed61 469 Gene3D G3DSA:3.10.20.70 3 105 3.0E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPO0024 3ef70901c361257cfd740054cf84ed61 469 PANTHER PTHR20852 1 138 3.2E-275 T 22-04-2016 YPO0024 3ef70901c361257cfd740054cf84ed61 469 PANTHER PTHR20852 160 469 3.2E-275 T 22-04-2016 YPO0024 3ef70901c361257cfd740054cf84ed61 469 Gene3D G3DSA:3.30.590.10 106 455 4.8E-140 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 YPO0024 3ef70901c361257cfd740054cf84ed61 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.7E-215 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPO0024 3ef70901c361257cfd740054cf84ed61 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.4E-137 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPO0024 3ef70901c361257cfd740054cf84ed61 469 SUPERFAMILY SSF55931 102 468 7.65E-138 T 22-04-2016 YPO0024 3ef70901c361257cfd740054cf84ed61 469 SMART SM01230 102 379 1.4E-148 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPO0024 3ef70901c361257cfd740054cf84ed61 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.9E-32 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPO0024 3ef70901c361257cfd740054cf84ed61 469 SUPERFAMILY SSF54368 3 100 1.19E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPO0024 3ef70901c361257cfd740054cf84ed61 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPO0024 3ef70901c361257cfd740054cf84ed61 469 PANTHER PTHR20852:SF15 1 138 3.2E-275 T 22-04-2016 YPO0024 3ef70901c361257cfd740054cf84ed61 469 PANTHER PTHR20852:SF15 160 469 3.2E-275 T 22-04-2016 YPO0024 3ef70901c361257cfd740054cf84ed61 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPO0024 3ef70901c361257cfd740054cf84ed61 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YPO1498 6c813179859f7dd1250e99b4ec216fd9 420 Pfam PF13437 HlyD family secretion protein 235 320 3.0E-6 T 22-04-2016 YPO1498 6c813179859f7dd1250e99b4ec216fd9 420 PANTHER PTHR30469 3 115 2.4E-126 T 22-04-2016 YPO1498 6c813179859f7dd1250e99b4ec216fd9 420 PANTHER PTHR30469 141 404 2.4E-126 T 22-04-2016 YPO1498 6c813179859f7dd1250e99b4ec216fd9 420 Gene3D G3DSA:2.40.50.100 228 264 3.2E-6 T 22-04-2016 YPO1498 6c813179859f7dd1250e99b4ec216fd9 420 Gene3D G3DSA:2.40.50.100 72 106 3.2E-6 T 22-04-2016 YPO1498 6c813179859f7dd1250e99b4ec216fd9 420 PANTHER PTHR30469:SF15 3 115 2.4E-126 T 22-04-2016 YPO1498 6c813179859f7dd1250e99b4ec216fd9 420 PANTHER PTHR30469:SF15 141 404 2.4E-126 T 22-04-2016 YPO1567 36dd236122be9428c17ec2583c0f7294 425 SMART SM00922 198 294 6.0E-22 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPO1567 36dd236122be9428c17ec2583c0f7294 425 PANTHER PTHR13794:SF58 186 423 6.5E-190 T 22-04-2016 YPO1567 36dd236122be9428c17ec2583c0f7294 425 PANTHER PTHR13794:SF58 1 150 6.5E-190 T 22-04-2016 YPO1567 36dd236122be9428c17ec2583c0f7294 425 Pfam PF13378 Enolase C-terminal domain-like 201 414 2.6E-56 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO1567 36dd236122be9428c17ec2583c0f7294 425 PANTHER PTHR13794 186 423 6.5E-190 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YPO1567 36dd236122be9428c17ec2583c0f7294 425 PANTHER PTHR13794 1 150 6.5E-190 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YPO1567 36dd236122be9428c17ec2583c0f7294 425 SUPERFAMILY SSF51604 183 423 2.49E-69 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO1567 36dd236122be9428c17ec2583c0f7294 425 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 244 275 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 YPO1567 36dd236122be9428c17ec2583c0f7294 425 Gene3D G3DSA:3.20.20.120 181 423 6.1E-93 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO1567 36dd236122be9428c17ec2583c0f7294 425 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 135 5.6E-5 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPO1567 36dd236122be9428c17ec2583c0f7294 425 Gene3D G3DSA:3.30.390.10 2 177 1.4E-88 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPO1567 36dd236122be9428c17ec2583c0f7294 425 SUPERFAMILY SSF54826 4 138 4.77E-37 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPO3960 982548f24b9612e4856db2dd77133b51 286 SUPERFAMILY SSF51569 3 284 1.61E-86 T 22-04-2016 YPO3960 982548f24b9612e4856db2dd77133b51 286 PIRSF PIRSF001359 1 286 2.4E-102 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO3960 982548f24b9612e4856db2dd77133b51 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO3960 982548f24b9612e4856db2dd77133b51 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 6.4E-80 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO3960 982548f24b9612e4856db2dd77133b51 286 Gene3D G3DSA:3.20.20.70 1 285 4.9E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3960 982548f24b9612e4856db2dd77133b51 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 8 284 3.6E-91 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO3960 982548f24b9612e4856db2dd77133b51 286 PANTHER PTHR30304 1 286 8.3E-92 T 22-04-2016 YPO1705 351118aa77d10706211ed2c4c413bc28 690 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 319 1.8E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1705 351118aa77d10706211ed2c4c413bc28 690 PANTHER PTHR32060 2 603 0.0 T 22-04-2016 YPO1705 351118aa77d10706211ed2c4c413bc28 690 SMART SM00228 245 322 1.3E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1705 351118aa77d10706211ed2c4c413bc28 690 SMART SM00245 325 530 3.0E-81 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 YPO1705 351118aa77d10706211ed2c4c413bc28 690 PANTHER PTHR32060:SF11 2 603 0.0 T 22-04-2016 YPO1705 351118aa77d10706211ed2c4c413bc28 690 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 550 2.0E-126 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 YPO1705 351118aa77d10706211ed2c4c413bc28 690 Gene3D G3DSA:3.90.226.10 334 532 1.1E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1705 351118aa77d10706211ed2c4c413bc28 690 Gene3D G3DSA:3.90.226.10 645 672 1.1E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1705 351118aa77d10706211ed2c4c413bc28 690 Gene3D G3DSA:2.30.42.10 251 333 1.5E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1705 351118aa77d10706211ed2c4c413bc28 690 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 533 666 3.3E-41 T 22-04-2016 IPR020992 Tail specific protease, C-terminal YPO1705 351118aa77d10706211ed2c4c413bc28 690 Pfam PF03572 Peptidase family S41 355 528 5.5E-53 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 YPO1705 351118aa77d10706211ed2c4c413bc28 690 SUPERFAMILY SSF50156 215 346 1.4E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1705 351118aa77d10706211ed2c4c413bc28 690 Gene3D G3DSA:3.30.750.44 195 250 4.2E-5 T 22-04-2016 YPO1705 351118aa77d10706211ed2c4c413bc28 690 SUPERFAMILY SSF52096 349 539 6.79E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1705 351118aa77d10706211ed2c4c413bc28 690 SUPERFAMILY SSF52096 165 263 6.79E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO3610 e06328a164b7441e685ac5b9119011b0 161 SUPERFAMILY SSF160631 12 158 1.7E-17 T 22-04-2016 YPO3610 e06328a164b7441e685ac5b9119011b0 161 Gene3D G3DSA:3.40.1580.10 11 157 3.1E-10 T 22-04-2016 IPR018958 SMI1/KNR4-like domain YPO3610 e06328a164b7441e685ac5b9119011b0 161 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 13 152 2.5E-16 T 22-04-2016 IPR018958 SMI1/KNR4-like domain YPO3610 e06328a164b7441e685ac5b9119011b0 161 SMART SM00860 11 153 9.9E-10 T 22-04-2016 IPR018958 SMI1/KNR4-like domain YPO0349 033e3c244ce758d4e5d82bdad2e7e941 192 PANTHER PTHR35335:SF1 1 180 2.9E-49 T 22-04-2016 YPO0349 033e3c244ce758d4e5d82bdad2e7e941 192 PANTHER PTHR35335 1 180 2.9E-49 T 22-04-2016 YPO0349 033e3c244ce758d4e5d82bdad2e7e941 192 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 1.1E-31 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 YPO0969 65282723916bb7a4008f96d61491dc1c 740 SUPERFAMILY SSF53955 596 717 1.01E-6 T 22-04-2016 IPR023346 Lysozyme-like domain YPO0969 65282723916bb7a4008f96d61491dc1c 740 SUPERFAMILY SSF53955 494 537 1.01E-6 T 22-04-2016 IPR023346 Lysozyme-like domain YPO0969 65282723916bb7a4008f96d61491dc1c 740 Gene3D G3DSA:2.70.70.10 17 157 2.8E-8 T 22-04-2016 YPO2682 4aac94c35a23ce4b9571e4cd6fa08497 253 Gene3D G3DSA:3.20.20.370 1 252 5.1E-80 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO2682 4aac94c35a23ce4b9571e4cd6fa08497 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 250 41.618 T 22-04-2016 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 YPO2682 4aac94c35a23ce4b9571e4cd6fa08497 253 SUPERFAMILY SSF88713 1 252 2.89E-77 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO2682 4aac94c35a23ce4b9571e4cd6fa08497 253 PANTHER PTHR31609 1 253 6.7E-106 T 22-04-2016 YPO2682 4aac94c35a23ce4b9571e4cd6fa08497 253 Pfam PF04794 YdjC-like protein 5 241 1.6E-62 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 244 2.6E-54 T 22-04-2016 YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 9.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 SUPERFAMILY SSF51735 4 246 4.48E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 Gene3D G3DSA:3.40.50.720 6 244 3.9E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PANTHER PTHR24322 8 185 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.2E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.2E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 2487082d61fb1e7c2f9d4d9a2f7fd23d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.2E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3421 b1f1270bbcc28b73c89610f97f737439 465 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPO3421 b1f1270bbcc28b73c89610f97f737439 465 PANTHER PTHR11785:SF26 1 456 0.0 T 22-04-2016 YPO3421 b1f1270bbcc28b73c89610f97f737439 465 Pfam PF00324 Amino acid permease 18 449 1.4E-118 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPO3421 b1f1270bbcc28b73c89610f97f737439 465 PANTHER PTHR11785 1 456 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO3421 b1f1270bbcc28b73c89610f97f737439 465 PIRSF PIRSF006060 1 459 2.2E-74 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1326 87af8d1c8680733b7646e0e25d051946 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 1.5E-39 T 22-04-2016 IPR006512 YidE/YbjL duplication YPO1326 87af8d1c8680733b7646e0e25d051946 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 3.9E-47 T 22-04-2016 IPR006512 YidE/YbjL duplication YPO1326 87af8d1c8680733b7646e0e25d051946 562 Gene3D G3DSA:3.30.70.1450 228 283 3.9E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO1326 87af8d1c8680733b7646e0e25d051946 562 PANTHER PTHR30445 3 558 0.0 T 22-04-2016 YPO1326 87af8d1c8680733b7646e0e25d051946 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 59.381 T 22-04-2016 IPR023017 Transport protein YbjL, putative YPO1326 87af8d1c8680733b7646e0e25d051946 562 Pfam PF06826 Predicted Permease Membrane Region 17 182 7.8E-39 T 22-04-2016 IPR006512 YidE/YbjL duplication YPO1326 87af8d1c8680733b7646e0e25d051946 562 Pfam PF06826 Predicted Permease Membrane Region 386 554 8.1E-42 T 22-04-2016 IPR006512 YidE/YbjL duplication YPO1326 87af8d1c8680733b7646e0e25d051946 562 PANTHER PTHR30445:SF4 3 558 0.0 T 22-04-2016 YPO1326 87af8d1c8680733b7646e0e25d051946 562 Gene3D G3DSA:3.30.70.1450 303 374 6.6E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO1326 87af8d1c8680733b7646e0e25d051946 562 SUPERFAMILY SSF116726 291 374 5.23E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO1326 87af8d1c8680733b7646e0e25d051946 562 Pfam PF02080 TrkA-C domain 305 372 1.4E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO1326 87af8d1c8680733b7646e0e25d051946 562 Pfam PF02080 TrkA-C domain 227 278 5.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO1326 87af8d1c8680733b7646e0e25d051946 562 SUPERFAMILY SSF116726 227 282 1.7E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO3025 908025394c8a355317bb0bd109149a94 299 PANTHER PTHR30521 1 299 1.5E-137 T 22-04-2016 YPO3025 908025394c8a355317bb0bd109149a94 299 Pfam PF04261 Dyp-type peroxidase family 5 294 1.3E-92 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YPO3025 908025394c8a355317bb0bd109149a94 299 PANTHER PTHR30521:SF0 1 299 1.5E-137 T 22-04-2016 YPO3025 908025394c8a355317bb0bd109149a94 299 SUPERFAMILY SSF54909 1 297 5.54E-91 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO3025 908025394c8a355317bb0bd109149a94 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 296 1.3E-85 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YPO1678 e95a60b46db058749311a4b194388089 290 SUPERFAMILY SSF47757 18 94 5.75E-25 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPO1678 e95a60b46db058749311a4b194388089 290 PIRSF PIRSF000410 10 288 6.1E-99 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR YPO1678 e95a60b46db058749311a4b194388089 290 PANTHER PTHR24422:SF13 18 290 7.2E-160 T 22-04-2016 YPO1678 e95a60b46db058749311a4b194388089 290 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 80 1.9E-19 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPO1678 e95a60b46db058749311a4b194388089 290 Gene3D G3DSA:3.40.50.150 94 284 7.6E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1678 e95a60b46db058749311a4b194388089 290 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 282 2.7E-58 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YPO1678 e95a60b46db058749311a4b194388089 290 Gene3D G3DSA:1.10.155.10 16 93 6.0E-33 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPO1678 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPO1678 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPO1678 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPO1678 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPO1678 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPO1678 e95a60b46db058749311a4b194388089 290 PRINTS PR00996 Glutamate methyltransferase family signature 121 141 5.2E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPO1678 e95a60b46db058749311a4b194388089 290 PANTHER PTHR24422 18 290 7.2E-160 T 22-04-2016 YPO1678 e95a60b46db058749311a4b194388089 290 SMART SM00138 27 287 4.6E-114 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YPO1678 e95a60b46db058749311a4b194388089 290 SUPERFAMILY SSF53335 95 284 8.36E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 PANTHER PTHR10088 1 295 1.8E-211 T 22-04-2016 YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 3.0E-129 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 SUPERFAMILY SSF53697 4 249 5.12E-75 T 22-04-2016 YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 PANTHER PTHR10088:SF5 1 295 1.8E-211 T 22-04-2016 YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Gene3D G3DSA:3.40.50.10490 4 245 5.9E-94 T 22-04-2016 YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.497 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Pfam PF01380 SIS domain 128 208 2.7E-10 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 SUPERFAMILY SSF46934 239 277 5.19E-5 T 22-04-2016 IPR009060 UBA-like GO:0005515 YPO2925 4d89e985b1600ee3d0b0aebd1d03c6c1 295 Gene3D G3DSA:1.10.8.10 246 271 6.3E-4 T 22-04-2016 YPO0849 22c31d849143f22eff8b83af9303fe58 357 PANTHER PTHR30146:SF34 4 355 1.1E-209 T 22-04-2016 YPO0849 22c31d849143f22eff8b83af9303fe58 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0849 22c31d849143f22eff8b83af9303fe58 357 SMART SM00354 5 75 2.1E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0849 22c31d849143f22eff8b83af9303fe58 357 SUPERFAMILY SSF47413 5 63 3.66E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0849 22c31d849143f22eff8b83af9303fe58 357 Gene3D G3DSA:3.40.50.2300 66 179 9.0E-34 T 22-04-2016 YPO0849 22c31d849143f22eff8b83af9303fe58 357 Pfam PF13377 Periplasmic binding protein-like domain 173 331 2.9E-32 T 22-04-2016 YPO0849 22c31d849143f22eff8b83af9303fe58 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0849 22c31d849143f22eff8b83af9303fe58 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0849 22c31d849143f22eff8b83af9303fe58 357 SUPERFAMILY SSF53822 62 325 5.6E-51 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0849 22c31d849143f22eff8b83af9303fe58 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 1.5E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0849 22c31d849143f22eff8b83af9303fe58 357 Gene3D G3DSA:3.40.50.2300 180 307 1.4E-40 T 22-04-2016 YPO0849 22c31d849143f22eff8b83af9303fe58 357 Gene3D G3DSA:1.10.260.40 6 65 9.8E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0849 22c31d849143f22eff8b83af9303fe58 357 PANTHER PTHR30146 4 355 1.1E-209 T 22-04-2016 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 SMART SM00387 591 702 9.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 SMART SM00448 835 946 3.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 719 808 3.6E-31 T 22-04-2016 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 SMART SM00388 479 544 3.3E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PRINTS PR00344 Bacterial sensor protein C-terminal signature 686 699 5.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 641 5.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 655 5.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PRINTS PR00344 Bacterial sensor protein C-terminal signature 662 680 5.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 Pfam PF00072 Response regulator receiver domain 837 946 2.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 SUPERFAMILY SSF52172 712 825 8.45E-40 T 22-04-2016 IPR011006 CheY-like superfamily YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 SUPERFAMILY SSF52172 835 952 4.98E-38 T 22-04-2016 IPR011006 CheY-like superfamily YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 Gene3D G3DSA:3.40.50.2300 832 951 2.2E-39 T 22-04-2016 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 32 951 27.159 T 22-04-2016 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 Gene3D G3DSA:3.30.565.10 531 704 2.6E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PANTHER PTHR24423 48 91 5.4E-282 T 22-04-2016 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PANTHER PTHR24423 365 705 5.4E-282 T 22-04-2016 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PANTHER PTHR24423 762 957 5.4E-282 T 22-04-2016 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 SUPERFAMILY SSF55874 533 704 1.96E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PANTHER PTHR24423:SF382 48 91 5.4E-282 T 22-04-2016 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PANTHER PTHR24423:SF382 365 705 5.4E-282 T 22-04-2016 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 PANTHER PTHR24423:SF382 762 957 5.4E-282 T 22-04-2016 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 SUPERFAMILY SSF47384 463 545 2.94E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 Gene3D G3DSA:1.10.287.130 483 530 2.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 Pfam PF00512 His Kinase A (phospho-acceptor) domain 479 543 9.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 591 700 2.7E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1217 1e22f949c4ce11870de90bda49b8d7d8 957 Gene3D G3DSA:3.30.450.20 437 482 6.0E-6 T 22-04-2016 YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 676 6.1E-38 T 22-04-2016 IPR000160 GGDEF domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 PANTHER PTHR24423:SF544 22 269 5.2E-42 T 22-04-2016 YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SMART SM00267 521 678 1.0E-35 T 22-04-2016 IPR000160 GGDEF domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Gene3D G3DSA:3.30.450.20 381 519 4.1E-24 T 22-04-2016 YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Gene3D G3DSA:3.30.450.20 13 124 1.9E-19 T 22-04-2016 YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Gene3D G3DSA:3.30.450.20 253 376 1.4E-23 T 22-04-2016 YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Pfam PF13426 PAS domain 280 382 1.2E-8 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Pfam PF13426 PAS domain 151 254 3.5E-13 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Pfam PF13426 PAS domain 24 126 7.9E-11 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Gene3D G3DSA:3.30.70.270 534 676 1.2E-42 T 22-04-2016 YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Gene3D G3DSA:3.30.450.20 125 252 5.3E-25 T 22-04-2016 YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SUPERFAMILY SSF55785 123 250 1.74E-24 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SUPERFAMILY SSF55785 24 136 1.61E-19 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 262 7.9E-21 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 133 6.8E-17 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 390 2.8E-16 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 399 528 4.8E-15 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SUPERFAMILY SSF55785 380 519 2.79E-20 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 PANTHER PTHR24423 22 269 5.2E-42 T 22-04-2016 YPO1751a 5596e16f1b77b07e9383993f352325b5 680 Pfam PF00989 PAS fold 403 518 6.4E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SMART SM00091 267 335 1.2 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SMART SM00091 11 80 5.7E-5 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SMART SM00091 139 208 6.4E-4 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SMART SM00091 402 468 1.3E-8 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 675 4.6E-36 T 22-04-2016 IPR000160 GGDEF domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SUPERFAMILY SSF55785 251 377 1.92E-25 T 22-04-2016 IPR000014 PAS domain YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SMART SM00086 85 127 7.1 T 22-04-2016 IPR001610 PAC motif YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SMART SM00086 213 255 0.33 T 22-04-2016 IPR001610 PAC motif YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SMART SM00086 341 383 0.021 T 22-04-2016 IPR001610 PAC motif YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SMART SM00086 479 521 54.0 T 22-04-2016 IPR001610 PAC motif YPO1751a 5596e16f1b77b07e9383993f352325b5 680 SUPERFAMILY SSF55073 537 676 1.73E-37 T 22-04-2016 IPR029787 Nucleotide cyclase YPO1091 7c3f3c5736859a056c56c7493b6b831e 180 Pfam PF10554 Ash protein family 13 111 1.4E-24 T 22-04-2016 IPR018880 Bacteriophage P4, Ash protein YPO0072 0abe7111de3977959f985ca46013b38f 354 SUPERFAMILY SSF46689 81 129 2.96E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0072 0abe7111de3977959f985ca46013b38f 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 187 263 1.8E-5 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YPO0072 0abe7111de3977959f985ca46013b38f 354 PANTHER PTHR10815 154 348 9.1E-133 T 22-04-2016 YPO0072 0abe7111de3977959f985ca46013b38f 354 PANTHER PTHR10815:SF9 154 348 9.1E-133 T 22-04-2016 YPO0072 0abe7111de3977959f985ca46013b38f 354 SUPERFAMILY SSF46767 265 347 1.07E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPO0072 0abe7111de3977959f985ca46013b38f 354 PIRSF PIRSF000409 1 354 3.6E-145 T 22-04-2016 IPR016221 Bifunctional regulatory protein Ada YPO0072 0abe7111de3977959f985ca46013b38f 354 Pfam PF02805 Metal binding domain of Ada 8 70 1.8E-32 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YPO0072 0abe7111de3977959f985ca46013b38f 354 SMART SM00342 96 178 2.6E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0072 0abe7111de3977959f985ca46013b38f 354 Pfam PF12833 Helix-turn-helix domain 102 179 1.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0072 0abe7111de3977959f985ca46013b38f 354 Gene3D G3DSA:1.10.10.60 84 134 7.0E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0072 0abe7111de3977959f985ca46013b38f 354 Gene3D G3DSA:1.10.10.60 135 176 2.7E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0072 0abe7111de3977959f985ca46013b38f 354 SUPERFAMILY SSF57884 6 88 1.16E-32 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YPO0072 0abe7111de3977959f985ca46013b38f 354 Gene3D G3DSA:3.40.10.10 5 83 3.9E-35 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YPO0072 0abe7111de3977959f985ca46013b38f 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 316 322 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 YPO0072 0abe7111de3977959f985ca46013b38f 354 Gene3D G3DSA:1.10.10.10 265 351 6.8E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0072 0abe7111de3977959f985ca46013b38f 354 Gene3D G3DSA:3.30.160.70 177 264 6.7E-33 T 22-04-2016 YPO0072 0abe7111de3977959f985ca46013b38f 354 SUPERFAMILY SSF53155 186 264 9.42E-20 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YPO0072 0abe7111de3977959f985ca46013b38f 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 266 345 3.2E-35 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPO0072 0abe7111de3977959f985ca46013b38f 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 267 347 1.1E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 Gene3D G3DSA:2.160.10.10 4 194 3.0E-46 T 22-04-2016 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.0E-107 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 SUPERFAMILY SSF51161 2 262 1.36E-76 T 22-04-2016 IPR011004 Trimeric LpxA-like YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 2.3E-7 T 22-04-2016 IPR001451 Hexapeptide repeat YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 PANTHER PTHR23416 1 254 1.3E-141 T 22-04-2016 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 Gene3D G3DSA:1.20.1180.10 197 262 2.1E-26 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.7E-28 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 PANTHER PTHR23416:SF8 1 254 1.3E-141 T 22-04-2016 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 PIRSF PIRSF000456 4 262 2.1E-105 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO1056 be82f15e94e118d9b0e5b060f837ec00 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 47.811 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 PANTHER PTHR21087:SF9 1 173 3.9E-118 T 22-04-2016 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 44.914 T 22-04-2016 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 Gene3D G3DSA:3.40.50.300 2 168 7.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3215 a1fd742b5e1926411c5d5c764683d068 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 PANTHER PTHR21087 1 173 3.9E-118 T 22-04-2016 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 Pfam PF01202 Shikimate kinase 11 168 2.1E-47 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 25.271 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 SUPERFAMILY SSF52540 3 169 1.62E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3215 a1fd742b5e1926411c5d5c764683d068 174 PRINTS PR01100 Shikimate kinase family signature 95 112 5.7E-22 T 22-04-2016 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 PRINTS PR01100 Shikimate kinase family signature 57 65 5.7E-22 T 22-04-2016 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 PRINTS PR01100 Shikimate kinase family signature 29 42 5.7E-22 T 22-04-2016 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 PRINTS PR01100 Shikimate kinase family signature 5 20 5.7E-22 T 22-04-2016 YPO3215 a1fd742b5e1926411c5d5c764683d068 174 PRINTS PR01100 Shikimate kinase family signature 74 83 5.7E-22 T 22-04-2016 YPO2288 e55baa201701f554dc67935a8be392ff 546 Gene3D G3DSA:3.30.1730.10 13 166 1.2E-58 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YPO2288 e55baa201701f554dc67935a8be392ff 546 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 165 6.7E-50 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YPO2288 e55baa201701f554dc67935a8be392ff 546 PANTHER PTHR21234:SF11 192 237 1.2E-142 T 22-04-2016 YPO2288 e55baa201701f554dc67935a8be392ff 546 PANTHER PTHR21234:SF11 261 507 1.2E-142 T 22-04-2016 YPO2288 e55baa201701f554dc67935a8be392ff 546 Hamap MF_01932 AMP nucleosidase [amn]. 5 511 54.922 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YPO2288 e55baa201701f554dc67935a8be392ff 546 Pfam PF01048 Phosphorylase superfamily 280 443 8.6E-18 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO2288 e55baa201701f554dc67935a8be392ff 546 SUPERFAMILY SSF53167 12 477 1.76E-144 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO2288 e55baa201701f554dc67935a8be392ff 546 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 14 483 4.7E-212 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YPO2288 e55baa201701f554dc67935a8be392ff 546 PANTHER PTHR21234 192 237 1.2E-142 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPO2288 e55baa201701f554dc67935a8be392ff 546 PANTHER PTHR21234 261 507 1.2E-142 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPO2288 e55baa201701f554dc67935a8be392ff 546 Gene3D G3DSA:3.40.50.1580 186 475 1.1E-113 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO2150 8b3c4c7ede4b98601591ea9eb14a98e2 301 SUPERFAMILY SSF46785 3 83 1.51E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2150 8b3c4c7ede4b98601591ea9eb14a98e2 301 Gene3D G3DSA:3.40.190.10 92 179 1.1E-15 T 22-04-2016 YPO2150 8b3c4c7ede4b98601591ea9eb14a98e2 301 PANTHER PTHR30537:SF29 1 298 8.2E-207 T 22-04-2016 YPO2150 8b3c4c7ede4b98601591ea9eb14a98e2 301 Gene3D G3DSA:1.10.10.10 2 83 1.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2150 8b3c4c7ede4b98601591ea9eb14a98e2 301 SUPERFAMILY SSF53850 89 298 5.07E-36 T 22-04-2016 YPO2150 8b3c4c7ede4b98601591ea9eb14a98e2 301 PANTHER PTHR30537 1 298 8.2E-207 T 22-04-2016 YPO2150 8b3c4c7ede4b98601591ea9eb14a98e2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2150 8b3c4c7ede4b98601591ea9eb14a98e2 301 Gene3D G3DSA:3.40.190.10 180 263 1.9E-20 T 22-04-2016 YPO2150 8b3c4c7ede4b98601591ea9eb14a98e2 301 Pfam PF03466 LysR substrate binding domain 88 295 3.6E-34 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0864 2cfd51b0d5bb086c3cc26cb238e82699 226 SUPERFAMILY SSF46785 63 184 8.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0864 2cfd51b0d5bb086c3cc26cb238e82699 226 Gene3D G3DSA:1.10.10.10 52 155 2.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0864 2cfd51b0d5bb086c3cc26cb238e82699 226 PANTHER PTHR33169:SF2 51 211 6.8E-65 T 22-04-2016 YPO0864 2cfd51b0d5bb086c3cc26cb238e82699 226 Pfam PF03551 Transcriptional regulator PadR-like family 68 137 4.9E-19 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal YPO0864 2cfd51b0d5bb086c3cc26cb238e82699 226 PANTHER PTHR33169 51 211 6.8E-65 T 22-04-2016 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 Gene3D G3DSA:1.25.40.10 450 811 2.2E-97 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 891 2.0E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 PANTHER PTHR26402 78 100 2.7E-20 T 22-04-2016 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 PANTHER PTHR26402 813 900 2.7E-20 T 22-04-2016 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 Gene3D G3DSA:3.40.50.300 31 162 2.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.609 T 22-04-2016 IPR023768 Transcriptional regulator HTH-type, MalT YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 SUPERFAMILY SSF48452 442 806 8.94E-158 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 SUPERFAMILY SSF52540 7 225 9.69E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 PANTHER PTHR26402:SF567 78 100 2.7E-20 T 22-04-2016 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 PANTHER PTHR26402:SF567 813 900 2.7E-20 T 22-04-2016 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 Gene3D G3DSA:1.10.10.10 837 895 6.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 SMART SM00421 836 893 6.4E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 SUPERFAMILY SSF46894 829 895 1.29E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO0123 9e033452c91f32f23d3db58bcefb3c71 903 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 SMART SM00098 75 481 5.1E-189 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 Pfam PF00245 Alkaline phosphatase 75 440 4.8E-118 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 ProSitePatterns PS00123 Alkaline phosphatase active site. 131 139 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 PANTHER PTHR11596 2 304 2.6E-148 T 22-04-2016 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 PANTHER PTHR11596 327 480 2.6E-148 T 22-04-2016 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 330 359 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 131 146 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 168 188 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 231 241 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 PRINTS PR00113 Alkaline phosphatase signature 74 94 4.07E-47 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 Gene3D G3DSA:3.40.720.10 57 480 5.8E-134 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 PANTHER PTHR11596:SF5 2 304 2.6E-148 T 22-04-2016 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 PANTHER PTHR11596:SF5 327 480 2.6E-148 T 22-04-2016 YPO2298 8d5a0c3a0cf248f594509bf0608e7d8d 481 SUPERFAMILY SSF53649 47 480 8.51E-132 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO3192 03c5222b38dfb7c7d8bd859756d7b060 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 3.9E-159 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO3192 03c5222b38dfb7c7d8bd859756d7b060 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 7.9E-132 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO3192 03c5222b38dfb7c7d8bd859756d7b060 356 SUPERFAMILY SSF111337 1 343 2.49E-137 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO3192 03c5222b38dfb7c7d8bd859756d7b060 356 PANTHER PTHR30307:SF0 2 350 8.8E-191 T 22-04-2016 YPO3192 03c5222b38dfb7c7d8bd859756d7b060 356 Gene3D G3DSA:3.40.1780.10 179 343 2.0E-100 T 22-04-2016 YPO3192 03c5222b38dfb7c7d8bd859756d7b060 356 Gene3D G3DSA:3.40.1780.10 1 62 2.0E-100 T 22-04-2016 YPO3192 03c5222b38dfb7c7d8bd859756d7b060 356 PANTHER PTHR30307 2 350 8.8E-191 T 22-04-2016 YPO3192 03c5222b38dfb7c7d8bd859756d7b060 356 Gene3D G3DSA:2.40.10.240 64 142 3.0E-19 T 22-04-2016 YPO3192 03c5222b38dfb7c7d8bd859756d7b060 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 46.902 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO4015 f93867e517d241665071b3986e76fde7 467 Pfam PF00324 Amino acid permease 16 451 5.1E-108 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPO4015 f93867e517d241665071b3986e76fde7 467 PANTHER PTHR11785:SF351 1 459 4.4E-290 T 22-04-2016 YPO4015 f93867e517d241665071b3986e76fde7 467 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPO4015 f93867e517d241665071b3986e76fde7 467 PIRSF PIRSF006060 1 466 4.2E-73 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO4015 f93867e517d241665071b3986e76fde7 467 PANTHER PTHR11785 1 459 4.4E-290 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO3152 6c99e95cf2618c43c2c58173773ddd7a 148 Gene3D G3DSA:1.10.150.320 79 147 1.1E-16 T 22-04-2016 YPO3152 6c99e95cf2618c43c2c58173773ddd7a 148 SUPERFAMILY SSF47781 72 146 7.34E-24 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPO3152 6c99e95cf2618c43c2c58173773ddd7a 148 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 80 146 4.5E-24 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YPO3152 6c99e95cf2618c43c2c58173773ddd7a 148 Pfam PF12836 Helix-hairpin-helix motif 83 146 1.1E-21 T 22-04-2016 YPO3152 6c99e95cf2618c43c2c58173773ddd7a 148 PANTHER PTHR21180 37 146 8.1E-32 T 22-04-2016 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 Pfam PF00672 HAMP domain 193 257 9.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 Gene3D G3DSA:3.30.565.10 339 476 1.9E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 SMART SM00388 264 328 0.0017 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 PANTHER PTHR24423 62 136 2.1E-165 T 22-04-2016 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 PANTHER PTHR24423 206 480 2.1E-165 T 22-04-2016 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 475 1.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 Pfam PF08918 PhoQ Sensor 8 185 6.1E-89 T 22-04-2016 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 PANTHER PTHR24423:SF496 62 136 2.1E-165 T 22-04-2016 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 PANTHER PTHR24423:SF496 206 480 2.1E-165 T 22-04-2016 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 SMART SM00387 373 479 1.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 SUPERFAMILY SSF47384 247 322 6.28E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO1633 442f1e8bc67dffde94e2af7c1ca3dce4 484 SUPERFAMILY SSF55874 335 475 6.16E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 Gene3D G3DSA:1.10.8.60 379 448 9.8E-21 T 22-04-2016 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 SUPERFAMILY SSF52540 206 447 1.52E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 Gene3D G3DSA:3.30.450.20 76 180 4.4E-12 T 22-04-2016 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 PANTHER PTHR32071 5 523 1.0E-233 T 22-04-2016 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 Gene3D G3DSA:3.40.50.300 202 378 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 SMART SM00091 80 146 7.9E-6 T 22-04-2016 IPR000014 PAS domain YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 SMART SM00382 226 370 4.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 Pfam PF00158 Sigma-54 interaction domain 206 372 1.1E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 PANTHER PTHR32071:SF3 5 523 1.0E-233 T 22-04-2016 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 Gene3D G3DSA:1.10.10.60 458 513 3.8E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 SUPERFAMILY SSF55785 81 170 4.76E-8 T 22-04-2016 IPR000014 PAS domain YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 Pfam PF00989 PAS fold 82 124 4.5E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 466 513 8.0E-28 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 SUPERFAMILY SSF46689 459 513 1.43E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2344 71f563642e8fe78f8521fbb5ca60e797 525 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.9E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.9E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.9E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.9E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 SUPERFAMILY SSF52954 462 571 5.74E-33 T 22-04-2016 IPR004154 Anticodon-binding YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 SUPERFAMILY SSF55826 218 390 1.01E-30 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 Pfam PF03129 Anticodon binding domain 475 568 8.4E-21 T 22-04-2016 IPR004154 Anticodon-binding YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 PANTHER PTHR11451:SF3 4 245 2.7E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 PANTHER PTHR11451:SF3 399 572 2.7E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 6.3E-49 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 3.3E-271 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 SUPERFAMILY SSF55681 407 478 6.64E-107 T 22-04-2016 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 SUPERFAMILY SSF55681 10 237 6.64E-107 T 22-04-2016 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 Gene3D G3DSA:3.40.50.800 470 570 2.1E-31 T 22-04-2016 IPR004154 Anticodon-binding YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.807 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 2.0E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 PANTHER PTHR11451 4 245 2.7E-161 T 22-04-2016 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 PANTHER PTHR11451 399 572 2.7E-161 T 22-04-2016 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 Gene3D G3DSA:3.90.960.10 254 388 3.6E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 PIRSF PIRSF001535 1 572 3.7E-275 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 Gene3D G3DSA:3.30.930.10 1 228 5.9E-108 T 22-04-2016 YPO1068 bf9471096bc1aa35d7c301b4e33354d2 572 Gene3D G3DSA:3.30.930.10 407 468 5.9E-108 T 22-04-2016 YPO2554 2df207d132bf2e6dc2b11adf3f1bac31 225 Gene3D G3DSA:3.40.50.700 52 179 2.6E-31 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YPO2554 2df207d132bf2e6dc2b11adf3f1bac31 225 PANTHER PTHR11995 2 221 4.5E-140 T 22-04-2016 YPO2554 2df207d132bf2e6dc2b11adf3f1bac31 225 SUPERFAMILY SSF56770 43 190 5.1E-64 T 22-04-2016 YPO2554 2df207d132bf2e6dc2b11adf3f1bac31 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 41.895 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YPO2554 2df207d132bf2e6dc2b11adf3f1bac31 225 PANTHER PTHR11995:SF14 2 221 4.5E-140 T 22-04-2016 YPO2554 2df207d132bf2e6dc2b11adf3f1bac31 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 183 9.4E-69 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YPO2554 2df207d132bf2e6dc2b11adf3f1bac31 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 69 175 5.1E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YPO2554 2df207d132bf2e6dc2b11adf3f1bac31 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YPO2578 c4f4a461b487f56b986769d01904d7f5 648 Gene3D G3DSA:3.40.50.970 419 623 2.2E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2578 c4f4a461b487f56b986769d01904d7f5 648 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 227 360 9.9E-31 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPO2578 c4f4a461b487f56b986769d01904d7f5 648 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 480 499 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPO2578 c4f4a461b487f56b986769d01904d7f5 648 Gene3D G3DSA:3.40.50.970 5 218 8.6E-56 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2578 c4f4a461b487f56b986769d01904d7f5 648 Gene3D G3DSA:3.40.50.1220 219 369 6.5E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO2578 c4f4a461b487f56b986769d01904d7f5 648 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 203 9.0E-33 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPO2578 c4f4a461b487f56b986769d01904d7f5 648 PANTHER PTHR18968 1 648 0.0 T 22-04-2016 YPO2578 c4f4a461b487f56b986769d01904d7f5 648 PANTHER PTHR18968:SF9 1 648 0.0 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 YPO2578 c4f4a461b487f56b986769d01904d7f5 648 SUPERFAMILY SSF52518 421 639 2.68E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2578 c4f4a461b487f56b986769d01904d7f5 648 SUPERFAMILY SSF52518 8 216 4.05E-33 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2578 c4f4a461b487f56b986769d01904d7f5 648 SUPERFAMILY SSF52467 192 376 3.27E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO2578 c4f4a461b487f56b986769d01904d7f5 648 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 12 646 2.1E-279 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 YPO2578 c4f4a461b487f56b986769d01904d7f5 648 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 444 603 1.7E-39 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF53633 1 297 1.06E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 3.9E-28 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF51735 464 636 1.89E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.9E-143 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 Gene3D G3DSA:3.30.360.10 636 791 1.4E-57 T 22-04-2016 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF13840 ACT domain 395 453 6.6E-8 T 22-04-2016 IPR027795 GATS-like ACT domain YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF01842 ACT domain 324 375 4.0E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF55021 383 476 3.49E-22 T 22-04-2016 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF55347 614 797 2.55E-53 T 22-04-2016 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.1E-50 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 Gene3D G3DSA:3.40.1160.10 111 298 4.7E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 Gene3D G3DSA:3.40.1160.10 1 49 4.7E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 Pfam PF00696 Amino acid kinase family 2 284 1.4E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 PANTHER PTHR21499:SF1 1 471 2.5E-190 T 22-04-2016 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 PANTHER PTHR21499 1 471 2.5E-190 T 22-04-2016 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 Gene3D G3DSA:3.40.50.720 464 635 1.2E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 SUPERFAMILY SSF55021 303 381 5.95E-23 T 22-04-2016 YPO0459 bc415912e13843f5d6778549a7ea7ce7 819 PIRSF PIRSF000727 1 817 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 YPO0996 a29bf0c88c5572dc5ca5fb18aacd104d 226 Pfam PF13518 Helix-turn-helix domain 118 170 5.5E-12 T 22-04-2016 YPO0996 a29bf0c88c5572dc5ca5fb18aacd104d 226 Pfam PF13518 Helix-turn-helix domain 63 108 6.1E-9 T 22-04-2016 YPO0996 a29bf0c88c5572dc5ca5fb18aacd104d 226 SUPERFAMILY SSF46689 112 213 1.16E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0996 a29bf0c88c5572dc5ca5fb18aacd104d 226 Gene3D G3DSA:1.10.10.10 60 107 7.0E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0996 a29bf0c88c5572dc5ca5fb18aacd104d 226 PANTHER PTHR33795 52 226 9.9E-89 T 22-04-2016 YPO0996 a29bf0c88c5572dc5ca5fb18aacd104d 226 PANTHER PTHR33795:SF1 52 226 9.9E-89 T 22-04-2016 YPO0996 a29bf0c88c5572dc5ca5fb18aacd104d 226 Gene3D G3DSA:1.10.10.60 115 209 6.7E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0996 a29bf0c88c5572dc5ca5fb18aacd104d 226 SUPERFAMILY SSF48295 45 108 4.34E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 Gene3D G3DSA:3.90.20.20 44 132 5.8E-29 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 Hamap MF_01151 Protein GrpE [grpE]. 4 189 21.202 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 PANTHER PTHR21237 14 192 2.1E-60 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 Gene3D G3DSA:2.30.22.10 133 191 1.5E-25 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 SUPERFAMILY SSF51064 134 190 1.57E-18 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 SUPERFAMILY SSF58014 44 133 8.11E-26 T 22-04-2016 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 PRINTS PR00773 GrpE protein signature 168 187 1.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 PRINTS PR00773 GrpE protein signature 86 101 1.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 PRINTS PR00773 GrpE protein signature 58 74 1.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 PRINTS PR00773 GrpE protein signature 141 156 1.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 Pfam PF01025 GrpE 16 189 1.3E-46 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPO1107 8774f26d20a8082b98f076d2ccd60d4b 192 ProSitePatterns PS01071 grpE protein signature. 144 187 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YPO1102 cc8db460c4cba1a9b36e583f4239b49a 144 PANTHER PTHR12901:SF7 1 142 3.5E-67 T 22-04-2016 YPO1102 cc8db460c4cba1a9b36e583f4239b49a 144 PANTHER PTHR12901 1 142 3.5E-67 T 22-04-2016 YPO1102 cc8db460c4cba1a9b36e583f4239b49a 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 2.2E-33 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain YPO1102 cc8db460c4cba1a9b36e583f4239b49a 144 Gene3D G3DSA:3.30.530.20 1 142 3.1E-49 T 22-04-2016 IPR023393 START-like domain YPO1102 cc8db460c4cba1a9b36e583f4239b49a 144 SUPERFAMILY SSF55961 1 143 3.17E-35 T 22-04-2016 YPO3830 350529f8a5506de69cd3b476989d0e1f 337 Pfam PF12146 Serine aminopeptidase, S33 54 314 2.5E-54 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 YPO3830 350529f8a5506de69cd3b476989d0e1f 337 SUPERFAMILY SSF53474 36 329 5.65E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3830 350529f8a5506de69cd3b476989d0e1f 337 Gene3D G3DSA:3.40.50.1820 30 331 1.2E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3830 350529f8a5506de69cd3b476989d0e1f 337 PANTHER PTHR11614 7 337 6.5E-178 T 22-04-2016 YPO3830 350529f8a5506de69cd3b476989d0e1f 337 PANTHER PTHR11614:SF100 7 337 6.5E-178 T 22-04-2016 YPO0773 392419b8b7536a1d032a55c66dc498aa 254 Gene3D G3DSA:3.40.50.1820 10 120 1.2E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0773 392419b8b7536a1d032a55c66dc498aa 254 Gene3D G3DSA:3.40.50.1820 174 239 1.2E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0773 392419b8b7536a1d032a55c66dc498aa 254 PANTHER PTHR11487 1 248 1.4E-112 T 22-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 YPO0773 392419b8b7536a1d032a55c66dc498aa 254 SUPERFAMILY SSF53474 8 236 3.85E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0773 392419b8b7536a1d032a55c66dc498aa 254 PANTHER PTHR11487:SF3 1 248 1.4E-112 T 22-04-2016 YPO0773 392419b8b7536a1d032a55c66dc498aa 254 Pfam PF00975 Thioesterase domain 16 237 1.2E-44 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YPO3859 685e55de756d04d68b6214c8a8890a29 376 Gene3D G3DSA:3.40.640.10 1 248 5.6E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO3859 685e55de756d04d68b6214c8a8890a29 376 SUPERFAMILY SSF53383 2 374 2.86E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO3859 685e55de756d04d68b6214c8a8890a29 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 2.6E-211 T 22-04-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 YPO3859 685e55de756d04d68b6214c8a8890a29 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 371 1.0E-83 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO3859 685e55de756d04d68b6214c8a8890a29 376 PANTHER PTHR30244 1 376 0.0 T 22-04-2016 YPO3859 685e55de756d04d68b6214c8a8890a29 376 PIRSF PIRSF000390 1 376 2.1E-116 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO3859 685e55de756d04d68b6214c8a8890a29 376 PANTHER PTHR30244:SF14 1 376 0.0 T 22-04-2016 YPO3859 685e55de756d04d68b6214c8a8890a29 376 Gene3D G3DSA:3.90.1150.10 251 375 1.7E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO3859 685e55de756d04d68b6214c8a8890a29 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.952 T 22-04-2016 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315|UniPathway: UPA00566 YPO1928 4858718edf715bd66af9419967f24e52 280 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 10 222 1.3E-36 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 YPO1928 4858718edf715bd66af9419967f24e52 280 SUPERFAMILY SSF51621 7 233 3.04E-59 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO1928 4858718edf715bd66af9419967f24e52 280 PIRSF PIRSF015582 1 280 1.7E-79 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YPO1928 4858718edf715bd66af9419967f24e52 280 PANTHER PTHR32308:SF3 1 280 7.4E-175 T 22-04-2016 YPO1928 4858718edf715bd66af9419967f24e52 280 PANTHER PTHR32308 1 280 7.4E-175 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YPO1928 4858718edf715bd66af9419967f24e52 280 Gene3D G3DSA:3.20.20.60 7 233 1.1E-65 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO1551 9d0483260b9d4aa2d301f4b125d34352 275 Gene3D G3DSA:3.40.50.720 90 224 2.2E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1551 9d0483260b9d4aa2d301f4b125d34352 275 Gene3D G3DSA:3.40.50.720 2 82 1.9E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1551 9d0483260b9d4aa2d301f4b125d34352 275 PANTHER PTHR10366 3 268 7.6E-75 T 22-04-2016 YPO1551 9d0483260b9d4aa2d301f4b125d34352 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 4.0E-6 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO1551 9d0483260b9d4aa2d301f4b125d34352 275 SUPERFAMILY SSF51735 2 267 1.94E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1551 9d0483260b9d4aa2d301f4b125d34352 275 PANTHER PTHR10366:SF289 3 268 7.6E-75 T 22-04-2016 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 Gene3D G3DSA:3.30.450.20 99 194 3.0E-10 T 22-04-2016 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 Gene3D G3DSA:1.10.287.130 195 254 1.7E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 6.0E-135 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 SMART SM00091 98 165 1.5E-7 T 22-04-2016 IPR000014 PAS domain YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 Pfam PF00989 PAS fold 99 193 3.8E-9 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 PANTHER PTHR24423:SF554 1 428 6.8E-198 T 22-04-2016 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 2.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 5.6E-29 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 SUPERFAMILY SSF55785 87 195 1.03E-12 T 22-04-2016 IPR000014 PAS domain YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 PANTHER PTHR24423 1 428 6.8E-198 T 22-04-2016 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 SUPERFAMILY SSF47384 190 268 4.51E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 1.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 Gene3D G3DSA:3.30.565.10 255 422 1.5E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 SMART SM00388 203 269 3.0E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 7.4E-9 T 22-04-2016 IPR000014 PAS domain YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 SUPERFAMILY SSF55874 259 423 6.02E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3204 a9a18b6d56498b82c11dd104676a9ee7 438 SMART SM00387 313 425 1.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1123 74b27488886d158629ec878f82921c0b 388 Gene3D G3DSA:3.30.1150.10 289 388 6.6E-43 T 22-04-2016 YPO1123 74b27488886d158629ec878f82921c0b 388 Pfam PF06519 TolA C-terminal 293 385 7.4E-37 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 YPO1123 74b27488886d158629ec878f82921c0b 388 TIGRFAM TIGR02794 tolA_full: protein TolA 13 387 4.0E-99 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 YPO1123 74b27488886d158629ec878f82921c0b 388 SUPERFAMILY SSF74653 300 388 5.3E-20 T 22-04-2016 YPO3627 4d6c09320337a5825ddf91d1d8531f5e 271 Pfam PF00005 ABC transporter 28 161 1.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3627 4d6c09320337a5825ddf91d1d8531f5e 271 PANTHER PTHR24220:SF365 14 247 4.0E-152 T 22-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 YPO3627 4d6c09320337a5825ddf91d1d8531f5e 271 SUPERFAMILY SSF52540 13 213 2.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3627 4d6c09320337a5825ddf91d1d8531f5e 271 Gene3D G3DSA:3.40.50.300 11 212 4.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3627 4d6c09320337a5825ddf91d1d8531f5e 271 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3627 4d6c09320337a5825ddf91d1d8531f5e 271 SMART SM00382 37 211 2.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3627 4d6c09320337a5825ddf91d1d8531f5e 271 PANTHER PTHR24220 14 247 4.0E-152 T 22-04-2016 YPO3320 7eb7568ab647f820bc9e2f6e16620897 127 SUPERFAMILY SSF47175 22 127 1.21E-35 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YPO3320 7eb7568ab647f820bc9e2f6e16620897 127 PIRSF PIRSF000029 1 127 4.2E-61 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YPO3320 7eb7568ab647f820bc9e2f6e16620897 127 Pfam PF07361 Cytochrome b562 23 127 1.3E-27 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YPO3320 7eb7568ab647f820bc9e2f6e16620897 127 Gene3D G3DSA:1.20.120.10 22 127 5.6E-35 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YPO2677 55baad91c73219333b401fd2311f61de 126 TIGRFAM TIGR00494 crcB: protein CrcB 7 125 2.5E-23 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPO2677 55baad91c73219333b401fd2311f61de 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 126 18.498 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPO2677 55baad91c73219333b401fd2311f61de 126 PANTHER PTHR28259 1 126 3.7E-38 T 22-04-2016 YPO2677 55baad91c73219333b401fd2311f61de 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 121 3.8E-20 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 Pfam PF00009 Elongation factor Tu GTP binding domain 29 230 5.3E-44 T 22-04-2016 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 22 478 52.985 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 SUPERFAMILY SSF50465 338 438 3.21E-28 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPO3365 691c5723fa35090a05a1375e4fb29a10 478 SUPERFAMILY SSF50447 246 331 9.94E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO3365 691c5723fa35090a05a1375e4fb29a10 478 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 37 217 4.0E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 Gene3D G3DSA:2.40.30.10 246 361 2.3E-17 T 22-04-2016 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 31 437 1.1E-202 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 Gene3D G3DSA:3.40.50.300 23 238 5.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3365 691c5723fa35090a05a1375e4fb29a10 478 SUPERFAMILY SSF52540 24 238 3.38E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3365 691c5723fa35090a05a1375e4fb29a10 478 PANTHER PTHR23115 77 352 1.2E-70 T 22-04-2016 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 PANTHER PTHR23115 35 57 1.2E-70 T 22-04-2016 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 129 140 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 166 175 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 93 101 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 113 123 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 PRINTS PR00315 GTP-binding elongation factor signature 32 45 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3365 691c5723fa35090a05a1375e4fb29a10 478 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 86 101 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 PANTHER PTHR32305:SF10 1 738 0.0 T 22-04-2016 YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 SUPERFAMILY SSF69255 361 447 1.12E-29 T 22-04-2016 YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 18 519 1.9E-154 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 SUPERFAMILY SSF69349 438 554 6.51E-10 T 22-04-2016 YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 SUPERFAMILY SSF69349 689 753 6.51E-10 T 22-04-2016 YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 Gene3D G3DSA:3.55.50.10 95 183 7.5E-34 T 22-04-2016 YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 17 502 3.7E-215 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 Pfam PF05954 Phage late control gene D protein (GPD) 25 327 1.8E-71 T 22-04-2016 YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 PANTHER PTHR32305 1 738 0.0 T 22-04-2016 YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 Gene3D G3DSA:2.40.50.230 367 447 5.5E-35 T 22-04-2016 IPR006531 Gp5 N-terminal YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 SUPERFAMILY SSF69279 190 360 1.7E-35 T 22-04-2016 YPO0507 48a9bfa6d86b7d38bc4923d1c5bdfcee 782 SUPERFAMILY SSF69279 14 180 4.12E-46 T 22-04-2016 YPO1413 fe31bc454ace85e5481ec35d159c0863 401 Gene3D G3DSA:3.20.140.10 4 395 8.1E-147 T 22-04-2016 YPO1413 fe31bc454ace85e5481ec35d159c0863 401 PIRSF PIRSF000484 1 382 1.0E-57 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPO1413 fe31bc454ace85e5481ec35d159c0863 401 SUPERFAMILY SSF54675 3 138 1.21E-41 T 22-04-2016 YPO1413 fe31bc454ace85e5481ec35d159c0863 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 396 48.606 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPO1413 fe31bc454ace85e5481ec35d159c0863 401 SUPERFAMILY SSF51690 120 392 1.16E-85 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 YPO1413 fe31bc454ace85e5481ec35d159c0863 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 395 9.6E-164 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPO1413 fe31bc454ace85e5481ec35d159c0863 401 PANTHER PTHR11098:SF14 1 397 0.0 T 22-04-2016 YPO1413 fe31bc454ace85e5481ec35d159c0863 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 9.7E-81 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPO1413 fe31bc454ace85e5481ec35d159c0863 401 PANTHER PTHR11098 1 397 0.0 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 Gene3D G3DSA:3.90.550.10 4 271 7.1E-101 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 PANTHER PTHR12526:SF387 154 289 1.5E-111 T 22-04-2016 YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 PANTHER PTHR12526:SF387 352 465 1.5E-111 T 22-04-2016 YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 SUPERFAMILY SSF51182 185 467 6.61E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 PANTHER PTHR12526 154 289 1.5E-111 T 22-04-2016 YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 PANTHER PTHR12526 352 465 1.5E-111 T 22-04-2016 YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 SUPERFAMILY SSF53448 3 282 8.21E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 Pfam PF01050 Mannose-6-phosphate isomerase 315 465 7.6E-61 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 Gene3D G3DSA:2.60.120.10 358 465 2.1E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 Pfam PF00483 Nucleotidyl transferase 6 286 1.8E-70 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPO3099 7bcdae299ca3b48a92c9dcee4bdff240 470 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 465 2.9E-231 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 YPO3652 54ce61f4cf462698308f6b6942b6af2c 158 SUPERFAMILY SSF160631 53 141 1.26E-5 T 22-04-2016 YPO3652 54ce61f4cf462698308f6b6942b6af2c 158 Gene3D G3DSA:3.40.1580.10 51 124 2.1E-5 T 22-04-2016 IPR018958 SMI1/KNR4-like domain YPO1416 2caa3a1363b25107155743552f87a82f 183 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 41.452 T 22-04-2016 IPR009809 Cell division protein ZapC YPO1416 2caa3a1363b25107155743552f87a82f 183 Pfam PF07126 Cell-division protein ZapC 3 169 1.8E-70 T 22-04-2016 IPR009809 Cell division protein ZapC YPO1416 2caa3a1363b25107155743552f87a82f 183 PIRSF PIRSF010252 1 179 2.0E-60 T 22-04-2016 IPR009809 Cell division protein ZapC YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 SMART SM01086 782 875 1.4E-10 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 PANTHER PTHR11638:SF11 1 127 0.0 T 22-04-2016 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 PANTHER PTHR11638:SF11 162 869 0.0 T 22-04-2016 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 Gene3D G3DSA:1.10.8.60 381 464 2.3E-29 T 22-04-2016 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 Gene3D G3DSA:1.10.8.60 796 865 9.6E-11 T 22-04-2016 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 Gene3D G3DSA:1.10.1780.10 12 130 7.3E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 PANTHER PTHR11638 1 127 0.0 T 22-04-2016 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 PANTHER PTHR11638 162 869 0.0 T 22-04-2016 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 SUPERFAMILY SSF52540 560 852 2.78E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 783 860 3.3E-13 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 3.2E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 330 342 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 Gene3D G3DSA:3.40.50.300 196 378 2.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 SUPERFAMILY SSF81923 12 127 1.23E-16 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 SUPERFAMILY SSF52540 196 532 3.86E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 SMART SM00382 611 762 3.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 SMART SM00382 234 379 6.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 Gene3D G3DSA:3.40.50.300 565 795 6.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 3.2E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 3.2E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 3.2E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 3.2E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 864 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPO0971 dba04d3ff78c86530d81a74a31893ae4 882 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 239 351 1.5E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO2429 b670954fdb5725914e20b2659804ae14 327 Gene3D G3DSA:3.30.930.10 9 327 1.7E-133 T 22-04-2016 YPO2429 b670954fdb5725914e20b2659804ae14 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 5.4E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 YPO2429 b670954fdb5725914e20b2659804ae14 327 SUPERFAMILY SSF46589 14 99 1.15E-21 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 YPO2429 b670954fdb5725914e20b2659804ae14 327 SUPERFAMILY SSF55681 92 327 2.7E-81 T 22-04-2016 YPO2429 b670954fdb5725914e20b2659804ae14 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 1.1E-25 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YPO2429 b670954fdb5725914e20b2659804ae14 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.816 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 YPO2429 b670954fdb5725914e20b2659804ae14 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.4E-117 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YPO2429 b670954fdb5725914e20b2659804ae14 327 PANTHER PTHR11538 92 327 5.2E-121 T 22-04-2016 YPO3462 7633da946a8a9f990156d7dd2eb2df16 239 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3462 7633da946a8a9f990156d7dd2eb2df16 239 PANTHER PTHR24220:SF380 7 237 1.8E-140 T 22-04-2016 YPO3462 7633da946a8a9f990156d7dd2eb2df16 239 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 6 227 4.8E-109 T 22-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 YPO3462 7633da946a8a9f990156d7dd2eb2df16 239 PANTHER PTHR24220 7 237 1.8E-140 T 22-04-2016 YPO3462 7633da946a8a9f990156d7dd2eb2df16 239 Pfam PF00005 ABC transporter 28 182 2.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3462 7633da946a8a9f990156d7dd2eb2df16 239 SUPERFAMILY SSF52540 6 227 2.01E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3462 7633da946a8a9f990156d7dd2eb2df16 239 Gene3D G3DSA:3.40.50.300 6 226 7.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3462 7633da946a8a9f990156d7dd2eb2df16 239 SMART SM00382 37 230 1.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2853 ac0198630031a77983e5e77696561030 239 SUPERFAMILY SSF52172 12 189 3.84E-40 T 22-04-2016 IPR011006 CheY-like superfamily YPO2853 ac0198630031a77983e5e77696561030 239 PANTHER PTHR26402 12 235 4.3E-133 T 22-04-2016 YPO2853 ac0198630031a77983e5e77696561030 239 PANTHER PTHR26402:SF530 12 235 4.3E-133 T 22-04-2016 YPO2853 ac0198630031a77983e5e77696561030 239 SMART SM00862 155 231 1.9E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2853 ac0198630031a77983e5e77696561030 239 Pfam PF00072 Response regulator receiver domain 14 122 6.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2853 ac0198630031a77983e5e77696561030 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 3.0E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2853 ac0198630031a77983e5e77696561030 239 Gene3D G3DSA:1.10.10.10 139 234 1.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2853 ac0198630031a77983e5e77696561030 239 Gene3D G3DSA:3.40.50.2300 11 135 4.3E-39 T 22-04-2016 YPO2853 ac0198630031a77983e5e77696561030 239 SMART SM00448 12 122 3.7E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2983 787d9699f6e2f6629474e373a0bbe5ca 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 81 1.4E-16 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YPO2983 787d9699f6e2f6629474e373a0bbe5ca 394 PANTHER PTHR10590 4 394 2.2E-249 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YPO2983 787d9699f6e2f6629474e373a0bbe5ca 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 1.7E-59 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YPO2983 787d9699f6e2f6629474e373a0bbe5ca 394 Pfam PF07670 Nucleoside recognition 92 190 1.3E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YPO2983 787d9699f6e2f6629474e373a0bbe5ca 394 PANTHER PTHR10590:SF13 4 394 2.2E-249 T 22-04-2016 YPO2158 26f5f9ffbe4b1469d9bd60c83f07df27 137 SUPERFAMILY SSF51316 6 133 8.89E-58 T 22-04-2016 IPR011057 Mss4-like YPO2158 26f5f9ffbe4b1469d9bd60c83f07df27 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 37.073 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YPO2158 26f5f9ffbe4b1469d9bd60c83f07df27 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 135 5.5E-60 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YPO2158 26f5f9ffbe4b1469d9bd60c83f07df27 137 PANTHER PTHR10173 10 134 8.7E-61 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 YPO2158 26f5f9ffbe4b1469d9bd60c83f07df27 137 PANTHER PTHR10173:SF18 10 134 8.7E-61 T 22-04-2016 YPO2158 26f5f9ffbe4b1469d9bd60c83f07df27 137 Pfam PF01641 SelR domain 12 127 2.8E-52 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YPO2158 26f5f9ffbe4b1469d9bd60c83f07df27 137 Gene3D G3DSA:2.170.150.20 6 133 4.5E-59 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YPO1384 7d566640d56a0f5355f5d2573f052e82 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YPO1384 7d566640d56a0f5355f5d2573f052e82 285 Gene3D G3DSA:1.20.1080.10 29 280 8.6E-89 T 22-04-2016 IPR023271 Aquaporin-like YPO1384 7d566640d56a0f5355f5d2573f052e82 285 Pfam PF01226 Formate/nitrite transporter 15 276 7.1E-76 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YPO1384 7d566640d56a0f5355f5d2573f052e82 285 PANTHER PTHR30520 12 228 4.4E-103 T 22-04-2016 YPO1384 7d566640d56a0f5355f5d2573f052e82 285 PANTHER PTHR30520 245 281 4.4E-103 T 22-04-2016 YPO1384 7d566640d56a0f5355f5d2573f052e82 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YPO1384 7d566640d56a0f5355f5d2573f052e82 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 1.7E-129 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 YPO1384 7d566640d56a0f5355f5d2573f052e82 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 1.0E-92 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YPO1384 7d566640d56a0f5355f5d2573f052e82 285 PANTHER PTHR30520:SF4 12 228 4.4E-103 T 22-04-2016 YPO1384 7d566640d56a0f5355f5d2573f052e82 285 PANTHER PTHR30520:SF4 245 281 4.4E-103 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.30.230.10 491 607 2.5E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0202 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF54211 486 608 7.84E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 2.4E-67 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 SMART SM00838 609 696 2.3E-58 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115:SF66 310 700 0.0 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF54980 409 487 1.73E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF00679 Elongation factor G C-terminus 609 694 2.0E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115 310 700 0.0 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.40.50.300 6 293 5.8E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.30.70.870 413 487 4.7E-39 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 SMART SM00889 487 607 7.2E-76 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF52540 6 287 2.97E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0202 407d907f20d548e759cca53cd1b32bbb 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF50447 271 411 1.63E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF14492 Elongation Factor G, domain II 411 485 7.7E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF03764 Elongation factor G, domain IV 486 607 1.3E-48 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:2.40.30.10 312 412 1.1E-38 T 22-04-2016 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 111.69 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 1.8E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 Gene3D G3DSA:3.30.70.240 608 694 1.2E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPO0202 407d907f20d548e759cca53cd1b32bbb 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPO0202 407d907f20d548e759cca53cd1b32bbb 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 5.6E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO0202 407d907f20d548e759cca53cd1b32bbb 702 SUPERFAMILY SSF54980 612 697 2.27E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 52.892 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 Gene3D G3DSA:1.10.287.180 3 76 4.0E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 SUPERFAMILY SSF46557 4 79 5.36E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 3.0E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 1.4E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 SUPERFAMILY SSF54534 81 156 5.1E-24 T 22-04-2016 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 2.2E-71 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 PANTHER PTHR30437:SF6 1 164 1.0E-99 T 22-04-2016 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 PANTHER PTHR30437 1 164 1.0E-99 T 22-04-2016 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 Gene3D G3DSA:3.10.50.30 77 156 1.9E-31 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.74 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 PIRSF PIRSF006092 1 158 2.8E-62 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YPO0135 80b197407cc1e66acf3b9c8dc2551033 171 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YPO1053 26f9e63da11e8cd882d54e87d66eed05 165 PANTHER PTHR35089 2 164 7.1E-71 T 22-04-2016 YPO1053 26f9e63da11e8cd882d54e87d66eed05 165 Gene3D G3DSA:3.30.910.20 12 165 3.5E-40 T 22-04-2016 YPO1053 26f9e63da11e8cd882d54e87d66eed05 165 Pfam PF03938 Outer membrane protein (OmpH-like) 10 163 9.0E-38 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 YPO1053 26f9e63da11e8cd882d54e87d66eed05 165 PIRSF PIRSF002094 1 165 5.2E-63 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 YPO1053 26f9e63da11e8cd882d54e87d66eed05 165 PANTHER PTHR35089:SF1 2 164 7.1E-71 T 22-04-2016 YPO1053 26f9e63da11e8cd882d54e87d66eed05 165 SMART SM00935 12 165 7.4E-57 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 YPO1053 26f9e63da11e8cd882d54e87d66eed05 165 SUPERFAMILY SSF111384 22 164 2.22E-39 T 22-04-2016 IPR024930 Skp domain YPO0089 49b0f50ece52a145445e4998fbfa19cc 222 PANTHER PTHR30447:SF0 1 222 4.1E-107 T 22-04-2016 YPO0089 49b0f50ece52a145445e4998fbfa19cc 222 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 1 208 1.9E-74 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YPO0089 49b0f50ece52a145445e4998fbfa19cc 222 SUPERFAMILY SSF56655 1 211 2.93E-59 T 22-04-2016 YPO0089 49b0f50ece52a145445e4998fbfa19cc 222 PANTHER PTHR30447 1 222 4.1E-107 T 22-04-2016 YPO0089 49b0f50ece52a145445e4998fbfa19cc 222 Gene3D G3DSA:3.40.190.90 1 185 9.7E-68 T 22-04-2016 YPO0089 49b0f50ece52a145445e4998fbfa19cc 222 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 216 1.2E-108 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 SUPERFAMILY SSF81665 270 363 1.44E-102 T 22-04-2016 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 SUPERFAMILY SSF81665 25 144 1.44E-102 T 22-04-2016 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 SUPERFAMILY SSF81665 688 896 1.44E-102 T 22-04-2016 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 Pfam PF00689 Cation transporting ATPase, C-terminus 722 890 1.1E-17 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 Pfam PF00702 haloacid dehalogenase-like hydrolase 365 653 4.4E-19 T 22-04-2016 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 371 377 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 SUPERFAMILY SSF81653 158 269 7.72E-26 T 22-04-2016 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 613 728 1.0E-27 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 406 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PRINTS PR01836 Magnesium-transporting ATPase signature 403 416 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PRINTS PR01836 Magnesium-transporting ATPase signature 282 298 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PRINTS PR01836 Magnesium-transporting ATPase signature 299 318 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 1.3E-88 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 Gene3D G3DSA:1.20.1110.10 75 138 6.6E-67 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 Gene3D G3DSA:1.20.1110.10 608 890 6.6E-67 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 Gene3D G3DSA:3.40.1110.10 361 546 4.8E-31 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PANTHER PTHR24093:SF128 18 898 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 PANTHER PTHR24093 18 898 0.0 T 22-04-2016 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 SUPERFAMILY SSF81660 364 547 3.14E-35 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 12 898 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 SUPERFAMILY SSF56784 532 682 7.41E-35 T 22-04-2016 IPR023214 HAD-like domain YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 Pfam PF00690 Cation transporter/ATPase, N-terminus 24 90 3.0E-15 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 Pfam PF00122 E1-E2 ATPase 112 360 2.4E-56 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 Gene3D G3DSA:2.70.150.10 139 270 5.3E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 Gene3D G3DSA:2.70.150.10 40 74 5.3E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO1661 5b2cd6d1516877c8e09d866a58ce84a9 899 SMART SM00831 22 95 2.9E-17 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 PANTHER PTHR11699 628 1114 5.8E-183 T 22-04-2016 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 883 890 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 SUPERFAMILY SSF81935 89 262 1.1E-65 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 SUPERFAMILY SSF47598 4 45 4.11E-10 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 Gene3D G3DSA:1.10.2060.10 143 261 4.7E-54 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 911 922 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 SUPERFAMILY SSF51730 263 618 2.31E-123 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 PANTHER PTHR11699:SF18 628 1114 5.8E-183 T 22-04-2016 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 Gene3D G3DSA:3.40.605.10 656 898 3.4E-68 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 Pfam PF01619 Proline dehydrogenase 271 570 5.0E-99 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 Gene3D G3DSA:3.20.20.220 262 618 6.3E-122 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 PIRSF PIRSF000197 75 1323 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 Pfam PF00171 Aldehyde dehydrogenase family 659 1107 1.1E-114 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 260 1.5E-45 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 611 1114 3.4E-250 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 Gene3D G3DSA:1.20.5.550 88 139 9.3E-26 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 SUPERFAMILY SSF53720 635 1113 1.96E-129 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPO1851 a0a574effdc8fcc7fa44cbea0ce46fe8 1323 Gene3D G3DSA:3.40.309.10 899 1091 2.6E-47 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO3790 19781d4174a80f5aa04856f9ba68b1e2 299 PANTHER PTHR22911:SF27 1 299 7.2E-94 T 22-04-2016 YPO3790 19781d4174a80f5aa04856f9ba68b1e2 299 PANTHER PTHR22911 1 299 7.2E-94 T 22-04-2016 YPO3790 19781d4174a80f5aa04856f9ba68b1e2 299 SUPERFAMILY SSF103481 35 131 8.5E-8 T 22-04-2016 YPO3790 19781d4174a80f5aa04856f9ba68b1e2 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 2.1E-83 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 YPO3790 19781d4174a80f5aa04856f9ba68b1e2 299 SUPERFAMILY SSF103481 196 276 1.07E-8 T 22-04-2016 YPO3790 19781d4174a80f5aa04856f9ba68b1e2 299 Pfam PF00892 EamA-like transporter family 1 129 4.2E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO3790 19781d4174a80f5aa04856f9ba68b1e2 299 Pfam PF00892 EamA-like transporter family 138 274 9.5E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO3404 3de9b5453277b27bfcf670f7bb3989e1 397 Pfam PF01522 Polysaccharide deacetylase 203 341 1.4E-18 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO3404 3de9b5453277b27bfcf670f7bb3989e1 397 PANTHER PTHR34216:SF1 89 391 9.4E-125 T 22-04-2016 YPO3404 3de9b5453277b27bfcf670f7bb3989e1 397 Gene3D G3DSA:3.20.20.370 175 347 1.3E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO3404 3de9b5453277b27bfcf670f7bb3989e1 397 PANTHER PTHR34216 89 391 9.4E-125 T 22-04-2016 YPO3404 3de9b5453277b27bfcf670f7bb3989e1 397 SUPERFAMILY SSF88713 167 363 1.11E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO0044 f240eaba6b87a5a28847c019df81a221 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 9.7E-111 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 YPO0044 f240eaba6b87a5a28847c019df81a221 238 SUPERFAMILY SSF55666 153 237 1.27E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPO0044 f240eaba6b87a5a28847c019df81a221 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 1.6E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPO0044 f240eaba6b87a5a28847c019df81a221 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.2E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 YPO0044 f240eaba6b87a5a28847c019df81a221 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site YPO0044 f240eaba6b87a5a28847c019df81a221 238 PANTHER PTHR11953:SF0 1 237 3.2E-88 T 22-04-2016 YPO0044 f240eaba6b87a5a28847c019df81a221 238 Gene3D G3DSA:3.30.230.70 9 237 9.5E-35 T 22-04-2016 IPR027408 PNPase/RNase PH domain YPO0044 f240eaba6b87a5a28847c019df81a221 238 PANTHER PTHR11953 1 237 3.2E-88 T 22-04-2016 YPO0044 f240eaba6b87a5a28847c019df81a221 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.607 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 YPO0044 f240eaba6b87a5a28847c019df81a221 238 SUPERFAMILY SSF54211 1 181 6.58E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3431 ad570b838904cb7e5987d86ead747e07 250 Gene3D G3DSA:1.10.3900.10 16 176 3.5E-65 T 22-04-2016 YPO3431 ad570b838904cb7e5987d86ead747e07 250 Pfam PF07072 Protein of unknown function (DUF1342) 22 228 1.9E-78 T 22-04-2016 IPR009777 Cell division protein ZapD YPO3431 ad570b838904cb7e5987d86ead747e07 250 SUPERFAMILY SSF160950 6 250 1.01E-91 T 22-04-2016 YPO3431 ad570b838904cb7e5987d86ead747e07 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 32.807 T 22-04-2016 IPR009777 Cell division protein ZapD YPO3431 ad570b838904cb7e5987d86ead747e07 250 PANTHER PTHR39455:SF1 4 250 1.3E-124 T 22-04-2016 YPO3431 ad570b838904cb7e5987d86ead747e07 250 PANTHER PTHR39455 4 250 1.3E-124 T 22-04-2016 YPO3431 ad570b838904cb7e5987d86ead747e07 250 Gene3D G3DSA:2.60.440.10 177 250 3.3E-32 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 Gene3D G3DSA:3.30.559.10 268 509 2.1E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 PANTHER PTHR23151 21 509 6.1E-275 T 22-04-2016 YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 183 509 4.1E-178 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 Pfam PF00364 Biotin-requiring enzyme 4 73 1.2E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 Pfam PF00364 Biotin-requiring enzyme 106 175 2.5E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 SUPERFAMILY SSF47005 200 245 4.19E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 Gene3D G3DSA:2.40.50.100 106 180 6.1E-21 T 22-04-2016 YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 Gene3D G3DSA:2.40.50.100 3 78 3.8E-22 T 22-04-2016 YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 SUPERFAMILY SSF51230 105 195 4.32E-23 T 22-04-2016 IPR011053 Single hybrid motif YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 SUPERFAMILY SSF52777 267 508 2.0E-80 T 22-04-2016 YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 278 508 2.4E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 SUPERFAMILY SSF51230 1 93 4.19E-23 T 22-04-2016 IPR011053 Single hybrid motif YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 Pfam PF02817 e3 binding domain 206 241 9.9E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 Gene3D G3DSA:4.10.320.10 199 246 8.9E-22 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPO3418 b62e8e9f921339017fffd2fa6ee61b32 509 PANTHER PTHR23151:SF68 21 509 6.1E-275 T 22-04-2016 YPO3020 a7e9bbed5997e73238cbce1ac29bcfcb 290 PANTHER PTHR18964:SF140 5 290 5.4E-175 T 22-04-2016 YPO3020 a7e9bbed5997e73238cbce1ac29bcfcb 290 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 2 290 49.236 T 22-04-2016 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138|UniPathway: UPA00629 YPO3020 a7e9bbed5997e73238cbce1ac29bcfcb 290 ProSitePatterns PS01125 ROK family signature. 129 156 - T 22-04-2016 IPR000600 ROK family YPO3020 a7e9bbed5997e73238cbce1ac29bcfcb 290 Gene3D G3DSA:3.30.420.40 134 256 2.7E-42 T 22-04-2016 YPO3020 a7e9bbed5997e73238cbce1ac29bcfcb 290 Pfam PF00480 ROK family 5 288 3.9E-70 T 22-04-2016 IPR000600 ROK family YPO3020 a7e9bbed5997e73238cbce1ac29bcfcb 290 PANTHER PTHR18964 5 290 5.4E-175 T 22-04-2016 YPO3020 a7e9bbed5997e73238cbce1ac29bcfcb 290 SUPERFAMILY SSF53067 3 288 6.72E-53 T 22-04-2016 YPO3020 a7e9bbed5997e73238cbce1ac29bcfcb 290 Gene3D G3DSA:3.30.420.40 3 133 5.1E-28 T 22-04-2016 YPO1733 46182cffe27e49c4c56efb16947f2e5d 94 SUPERFAMILY SSF54909 1 81 1.64E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO1733 46182cffe27e49c4c56efb16947f2e5d 94 PANTHER PTHR37828 1 94 1.8E-29 T 22-04-2016 YPO1733 46182cffe27e49c4c56efb16947f2e5d 94 Pfam PF03795 YCII-related domain 1 79 3.1E-10 T 22-04-2016 IPR005545 YCII-related YPO1733 46182cffe27e49c4c56efb16947f2e5d 94 PANTHER PTHR37828:SF1 1 94 1.8E-29 T 22-04-2016 YPO3261 90b6e687ed1182c0eca44b9f4dce847f 465 Pfam PF01425 Amidase 28 445 1.0E-95 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YPO3261 90b6e687ed1182c0eca44b9f4dce847f 465 Gene3D G3DSA:3.90.1300.10 5 455 4.7E-131 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YPO3261 90b6e687ed1182c0eca44b9f4dce847f 465 PANTHER PTHR11895 6 462 0.0 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YPO3261 90b6e687ed1182c0eca44b9f4dce847f 465 SUPERFAMILY SSF75304 5 454 4.45E-128 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 YPO3261 90b6e687ed1182c0eca44b9f4dce847f 465 PANTHER PTHR11895:SF74 6 462 0.0 T 22-04-2016 YPO3261 90b6e687ed1182c0eca44b9f4dce847f 465 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 9 459 8.2E-239 T 22-04-2016 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169|UniPathway: UPA00008 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 Pfam PF02378 Phosphotransferase system, EIIC 12 324 4.7E-75 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 SUPERFAMILY SSF55604 422 495 1.44E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 529 649 3.8E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 435 452 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 SUPERFAMILY SSF51261 521 672 1.34E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 Gene3D G3DSA:2.70.70.10 521 670 2.5E-55 T 22-04-2016 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 493 9.5E-203 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 Gene3D G3DSA:3.30.1360.60 419 496 6.9E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 PANTHER PTHR30009:SF4 4 507 3.5E-270 T 22-04-2016 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 591 603 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 Pfam PF00367 phosphotransferase system, EIIB 425 457 4.5E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 PANTHER PTHR30009 4 507 3.5E-270 T 22-04-2016 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 482 1.9E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO2628 7dcea70c33e0a613d5404403a4d435cb 677 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 529 652 2.9E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 SMART SM00471 41 153 1.3E-11 T 22-04-2016 IPR003607 HD/PDEase domain YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:3.30.70.260 627 697 9.5E-7 T 22-04-2016 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF13291 ACT domain 622 699 2.1E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF81301 180 392 4.25E-62 T 22-04-2016 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:3.10.20.30 387 448 5.2E-22 T 22-04-2016 IPR012675 Beta-grasp domain YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 PANTHER PTHR21262:SF0 3 702 0.0 T 22-04-2016 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 PANTHER PTHR21262 3 702 0.0 T 22-04-2016 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF02824 TGS domain 388 447 1.6E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF13328 HD domain 26 175 4.0E-53 T 22-04-2016 IPR003607 HD/PDEase domain YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF55021 629 699 4.4E-5 T 22-04-2016 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 SMART SM00954 235 345 8.8E-62 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF109604 3 190 2.39E-75 T 22-04-2016 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 SUPERFAMILY SSF81271 375 447 3.92E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 Gene3D G3DSA:3.30.460.10 178 324 5.1E-47 T 22-04-2016 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.3E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPO0038 01fc5306585b2b46f6298e05c1e8fb74 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 698 1.2E-286 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 YPO0957 4c482d57eff7a2ada8ea8f5860b5bd35 339 PANTHER PTHR32196 6 338 2.3E-119 T 22-04-2016 YPO0957 4c482d57eff7a2ada8ea8f5860b5bd35 339 PANTHER PTHR32196:SF21 6 338 2.3E-119 T 22-04-2016 YPO0957 4c482d57eff7a2ada8ea8f5860b5bd35 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 64 328 4.6E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO2772 706aabb44dd3580870f752a38ad7d061 505 PANTHER PTHR11907:SF0 1 480 3.9E-264 T 22-04-2016 YPO2772 706aabb44dd3580870f752a38ad7d061 505 Pfam PF00156 Phosphoribosyl transferase domain 294 394 5.7E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPO2772 706aabb44dd3580870f752a38ad7d061 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 44.771 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 YPO2772 706aabb44dd3580870f752a38ad7d061 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.0E-161 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 YPO2772 706aabb44dd3580870f752a38ad7d061 505 PIRSF PIRSF000485 1 483 1.2E-169 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 YPO2772 706aabb44dd3580870f752a38ad7d061 505 SUPERFAMILY SSF53271 252 485 1.31E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO2772 706aabb44dd3580870f752a38ad7d061 505 Gene3D G3DSA:3.60.20.10 2 260 4.2E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO2772 706aabb44dd3580870f752a38ad7d061 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 4.6E-15 T 22-04-2016 YPO2772 706aabb44dd3580870f752a38ad7d061 505 SUPERFAMILY SSF56235 2 259 1.2E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO2772 706aabb44dd3580870f752a38ad7d061 505 PANTHER PTHR11907 1 480 3.9E-264 T 22-04-2016 YPO2772 706aabb44dd3580870f752a38ad7d061 505 Gene3D G3DSA:3.40.50.2020 275 446 9.4E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO2604 76c0df49f130962c3ef3acc52a1acd63 631 PANTHER PTHR30627:SF2 6 626 1.3E-281 T 22-04-2016 YPO2604 76c0df49f130962c3ef3acc52a1acd63 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 2.7E-82 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPO2604 76c0df49f130962c3ef3acc52a1acd63 631 Gene3D G3DSA:3.90.1310.10 131 253 2.6E-39 T 22-04-2016 YPO2604 76c0df49f130962c3ef3acc52a1acd63 631 Gene3D G3DSA:3.40.710.10 254 610 2.3E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO2604 76c0df49f130962c3ef3acc52a1acd63 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 9.8E-236 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 YPO2604 76c0df49f130962c3ef3acc52a1acd63 631 PANTHER PTHR30627 6 626 1.3E-281 T 22-04-2016 YPO2604 76c0df49f130962c3ef3acc52a1acd63 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 4.0E-45 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YPO2604 76c0df49f130962c3ef3acc52a1acd63 631 SUPERFAMILY SSF56519 57 254 2.22E-52 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YPO2604 76c0df49f130962c3ef3acc52a1acd63 631 SUPERFAMILY SSF56601 255 610 1.3E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO1353 67c9d5ce2732c36a100f58f0d32c7eb0 186 SUPERFAMILY SSF48600 38 184 2.58E-36 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO1353 67c9d5ce2732c36a100f58f0d32c7eb0 186 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 29 141 3.6E-45 T 22-04-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO1353 67c9d5ce2732c36a100f58f0d32c7eb0 186 Gene3D G3DSA:1.20.59.10 39 104 6.0E-8 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO1353 67c9d5ce2732c36a100f58f0d32c7eb0 186 Pfam PF01817 Chorismate mutase type II 39 104 6.0E-9 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO1353 67c9d5ce2732c36a100f58f0d32c7eb0 186 PIRSF PIRSF026640 1 186 1.4E-67 T 22-04-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO1353 67c9d5ce2732c36a100f58f0d32c7eb0 186 SMART SM00830 35 106 1.8E-10 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO3818 b3d46fdd4345f7111df1a882dc327792 106 PIRSF PIRSF028538 1 106 7.7E-44 T 22-04-2016 IPR014949 Protein of unknown function DUF1820 YPO3818 b3d46fdd4345f7111df1a882dc327792 106 Pfam PF08850 Domain of unknown function (DUF1820) 7 99 1.6E-40 T 22-04-2016 IPR014949 Protein of unknown function DUF1820 YPO3093 d6b78048ebd45c0a2ff25f37e40522fb 404 SUPERFAMILY SSF103473 17 398 7.59E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3093 d6b78048ebd45c0a2ff25f37e40522fb 404 PANTHER PTHR23505:SF8 1 404 7.4E-170 T 22-04-2016 YPO3093 d6b78048ebd45c0a2ff25f37e40522fb 404 Pfam PF07690 Major Facilitator Superfamily 30 252 4.7E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO3093 d6b78048ebd45c0a2ff25f37e40522fb 404 Gene3D G3DSA:1.20.1250.20 227 397 1.0E-18 T 22-04-2016 YPO3093 d6b78048ebd45c0a2ff25f37e40522fb 404 Gene3D G3DSA:1.20.1250.20 25 197 5.4E-20 T 22-04-2016 YPO3093 d6b78048ebd45c0a2ff25f37e40522fb 404 PANTHER PTHR23505 1 404 7.4E-170 T 22-04-2016 YPO2008 cf8da6d9e98ffc684a08a311949816aa 132 Pfam PF00581 Rhodanese-like domain 25 112 1.1E-11 T 22-04-2016 IPR001763 Rhodanese-like domain YPO2008 cf8da6d9e98ffc684a08a311949816aa 132 SUPERFAMILY SSF52821 17 119 1.7E-22 T 22-04-2016 IPR001763 Rhodanese-like domain YPO2008 cf8da6d9e98ffc684a08a311949816aa 132 SMART SM00450 19 116 2.3E-11 T 22-04-2016 IPR001763 Rhodanese-like domain YPO2008 cf8da6d9e98ffc684a08a311949816aa 132 Gene3D G3DSA:3.40.250.10 25 118 7.6E-19 T 22-04-2016 IPR001763 Rhodanese-like domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 2017 2114 7.0E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1329 1422 1.1E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1918 2012 1.3E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 840 939 9.7E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 2115 2208 1.4E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 2515 2609 6.5E-14 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1233 1326 2.3E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1136 1230 1.9E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1812 1912 8.1E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 944 1037 6.6E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1617 1714 1.3E-14 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1040 1133 2.3E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 2419 2501 2.5E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 2721 2814 5.8E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1425 1518 5.1E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 2219 2312 1.18E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.1080 2818 2903 3.0E-26 T 22-04-2016 YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 550 643 1.0E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 2720 2809 2.5E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 845 934 1.6E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 650 739 1.8E-14 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1329 1417 2.3E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1425 1515 2.5E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1820 1907 6.2E-5 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 2421 2507 1.1E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1136 1225 3.4E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 2020 2109 3.8E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1620 1709 0.006 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 550 639 2.1E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 2218 2307 2.6E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1718 1807 4.4E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 2622 2711 8.5E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1040 1129 5.7E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 943 1032 1.6E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 746 835 0.016 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1233 1321 2.7E-6 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 2316 2408 0.0087 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1920 2009 4.3E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 2520 2610 0.015 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 1522 1612 0.011 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00634 2120 2209 1.2E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1718 1811 2.16E-20 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SMART SM00257 90 138 2.0E-6 T 22-04-2016 IPR018392 LysM domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1613 1714 3.92E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1040 1133 7.26E-19 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 945 1037 6.47E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1329 1422 1.71E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 652 742 8.04E-20 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 747 840 6.08E-14 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 2308 2398 5.89E-15 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 PANTHER PTHR39576 4 3013 0.0 T 22-04-2016 YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:3.10.350.10 90 126 2.5E-7 T 22-04-2016 IPR018392 LysM domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 2614 2716 1.29E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 2622 2714 1.5E-16 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1718 1811 1.8E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 2221 2311 8.3E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 2324 2414 2.1E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 551 643 2.3E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 2815 2896 2.55E-22 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 2010 2115 8.83E-20 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:3.10.100.10 2904 3012 2.2E-24 T 22-04-2016 IPR016186 C-type lectin-like YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1136 1230 2.75E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1920 2013 2.55E-19 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1808 1913 1.65E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 PRINTS PR01369 Intimin signature 290 305 4.0E-12 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 PRINTS PR01369 Intimin signature 318 337 4.0E-12 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 PRINTS PR01369 Intimin signature 386 405 4.0E-12 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 PRINTS PR01369 Intimin signature 473 485 4.0E-12 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 837 939 2.75E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF01476 LysM domain 91 138 1.3E-5 T 22-04-2016 IPR018392 LysM domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 2720 2813 3.53E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1524 1617 1.61E-13 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1425 1519 1.88E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF11924 Invasin beta-domain of outer membrane 165 438 1.4E-116 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 2411 2501 7.46E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 2513 2609 7.59E-15 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 1523 1616 3.2E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 650 743 3.2E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Gene3D G3DSA:2.60.40.920 744 839 1.0E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 2112 2205 1.22E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 SUPERFAMILY SSF49373 1232 1324 1.75E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 PANTHER PTHR39576:SF2 4 3013 0.0 T 22-04-2016 YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 553 641 1.6E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 1331 1412 2.2E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 2725 2808 3.4E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 946 1029 9.3E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 1927 2009 4.4E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 1427 1515 1.8E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 1722 1803 1.1E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 2427 2501 7.7E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 1139 1222 5.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 1042 1129 1.8E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 854 925 4.3E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 2625 2706 6.2E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 2023 2100 2.1E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 1826 1903 7.4E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 2327 2403 8.2E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 652 739 1.7E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 1023b246e04363dbfdec5a890ea70dad 3013 Pfam PF02369 Bacterial Ig-like domain (group 1) 2114 2200 4.4E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3999 daf578d4274282727ce85049de606691 358 Pfam PF00005 ABC transporter 59 210 2.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3999 daf578d4274282727ce85049de606691 358 ProSitePatterns PS00211 ABC transporters family signature. 183 197 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3999 daf578d4274282727ce85049de606691 358 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 261 345 4.1E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO3999 daf578d4274282727ce85049de606691 358 PANTHER PTHR24220 35 351 9.1E-217 T 22-04-2016 YPO3999 daf578d4274282727ce85049de606691 358 SMART SM00382 68 260 2.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3999 daf578d4274282727ce85049de606691 358 SUPERFAMILY SSF52540 44 282 6.44E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3999 daf578d4274282727ce85049de606691 358 Gene3D G3DSA:3.40.50.300 32 284 6.7E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3999 daf578d4274282727ce85049de606691 358 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 262 327 2.3E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO3999 daf578d4274282727ce85049de606691 358 PANTHER PTHR24220:SF493 35 351 9.1E-217 T 22-04-2016 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 SUPERFAMILY SSF46557 3 78 4.05E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 5.7E-32 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 SUPERFAMILY SSF54534 81 157 1.28E-24 T 22-04-2016 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.7E-60 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 PIRSF PIRSF006092 1 158 1.6E-55 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 9.6E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 Gene3D G3DSA:3.10.50.30 79 157 3.0E-32 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.737 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 PANTHER PTHR30437 1 157 8.1E-77 T 22-04-2016 YPO3505 d67d2b4cbef4b2723c7a69b2454f9a00 158 Gene3D G3DSA:1.10.287.180 1 75 8.6E-36 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YPO4092 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPO4092 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO4092 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO4092 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPO4092 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO4047 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPO4047 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO4047 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO4047 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPO4047 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3932 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPO3932 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3932 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3932 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPO3932 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3491 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPO3491 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3491 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3491 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPO3491 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0756 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPO0756 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0756 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0756 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPO0756 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3703 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPO3703 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3703 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3703 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPO3703 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0118 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPO0118 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0118 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0118 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPO0118 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0997 5ce28fed4b5352685c5d06b04d0bfb7f 261 PANTHER PTHR32552 1 258 1.4E-89 T 22-04-2016 YPO0997 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF00665 Integrase core domain 102 213 2.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0997 5ce28fed4b5352685c5d06b04d0bfb7f 261 SUPERFAMILY SSF53098 95 253 1.82E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0997 5ce28fed4b5352685c5d06b04d0bfb7f 261 Pfam PF13276 HTH-like domain 24 76 2.3E-16 T 22-04-2016 IPR025948 HTH-like domain YPO0997 5ce28fed4b5352685c5d06b04d0bfb7f 261 Gene3D G3DSA:3.30.420.10 95 252 5.1E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 SUPERFAMILY SSF53822 63 327 5.65E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0611 b92eba070075244a2a90631c49a7b8d1 328 SUPERFAMILY SSF47413 3 60 5.35E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 PANTHER PTHR30146:SF58 2 327 6.2E-197 T 22-04-2016 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 SMART SM00354 2 72 1.0E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 9.7E-35 T 22-04-2016 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 Gene3D G3DSA:3.40.50.2300 55 171 8.2E-33 T 22-04-2016 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 PANTHER PTHR30146 2 327 6.2E-197 T 22-04-2016 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 Gene3D G3DSA:3.40.50.2300 172 309 4.0E-47 T 22-04-2016 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 Gene3D G3DSA:1.10.260.40 3 54 7.7E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0611 b92eba070075244a2a90631c49a7b8d1 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.0E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0560 a732df4bef33207a740f6e7c04080b78 383 Gene3D G3DSA:3.30.1330.20 214 321 8.6E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPO0560 a732df4bef33207a740f6e7c04080b78 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 8.6E-37 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal YPO0560 a732df4bef33207a740f6e7c04080b78 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 337 1.1E-141 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 YPO0560 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPO0560 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPO0560 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPO0560 a732df4bef33207a740f6e7c04080b78 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPO0560 a732df4bef33207a740f6e7c04080b78 383 Gene3D G3DSA:3.40.50.1440 13 213 1.5E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPO0560 a732df4bef33207a740f6e7c04080b78 383 SUPERFAMILY SSF52490 12 207 1.44E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPO0560 a732df4bef33207a740f6e7c04080b78 383 SMART SM00865 206 324 8.3E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPO0560 a732df4bef33207a740f6e7c04080b78 383 SMART SM00864 12 204 6.1E-112 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPO0560 a732df4bef33207a740f6e7c04080b78 383 SUPERFAMILY SSF55307 203 319 2.98E-42 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal YPO0560 a732df4bef33207a740f6e7c04080b78 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 YPO0560 a732df4bef33207a740f6e7c04080b78 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 YPO0560 a732df4bef33207a740f6e7c04080b78 383 PANTHER PTHR30314:SF3 1 381 2.5E-208 T 22-04-2016 YPO0560 a732df4bef33207a740f6e7c04080b78 383 PANTHER PTHR30314 1 381 2.5E-208 T 22-04-2016 YPO0560 a732df4bef33207a740f6e7c04080b78 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 8.8E-42 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YPO0560 a732df4bef33207a740f6e7c04080b78 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.05 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 YPO0182 eeb631a508bce3ba2bf75ad52127363e 353 SUPERFAMILY SSF53850 53 325 1.34E-44 T 22-04-2016 YPO0182 eeb631a508bce3ba2bf75ad52127363e 353 PANTHER PTHR30024 4 345 3.3E-157 T 22-04-2016 YPO0182 eeb631a508bce3ba2bf75ad52127363e 353 Gene3D G3DSA:3.40.190.10 126 232 7.5E-21 T 22-04-2016 YPO0182 eeb631a508bce3ba2bf75ad52127363e 353 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 43 248 8.6E-21 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 YPO0182 eeb631a508bce3ba2bf75ad52127363e 353 Gene3D G3DSA:3.40.190.10 233 271 1.9E-5 T 22-04-2016 YPO0182 eeb631a508bce3ba2bf75ad52127363e 353 Gene3D G3DSA:3.40.190.10 82 120 1.9E-5 T 22-04-2016 YPO0182 eeb631a508bce3ba2bf75ad52127363e 353 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 44 339 3.5E-133 T 22-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 YPO0182 eeb631a508bce3ba2bf75ad52127363e 353 PANTHER PTHR30024:SF17 4 345 3.3E-157 T 22-04-2016 YPO0182 eeb631a508bce3ba2bf75ad52127363e 353 SMART SM00062 43 258 1.5E-19 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO1114 669411f3a55a30bb060c97a5794e1491 407 Pfam PF02817 e3 binding domain 114 146 1.4E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPO1114 669411f3a55a30bb060c97a5794e1491 407 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO1114 669411f3a55a30bb060c97a5794e1491 407 SUPERFAMILY SSF52777 177 406 9.34E-90 T 22-04-2016 YPO1114 669411f3a55a30bb060c97a5794e1491 407 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 405 4.9E-82 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 YPO1114 669411f3a55a30bb060c97a5794e1491 407 SUPERFAMILY SSF47005 107 151 5.49E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPO1114 669411f3a55a30bb060c97a5794e1491 407 Gene3D G3DSA:2.40.50.100 1 96 3.5E-27 T 22-04-2016 YPO1114 669411f3a55a30bb060c97a5794e1491 407 PANTHER PTHR23151 4 407 4.9E-249 T 22-04-2016 YPO1114 669411f3a55a30bb060c97a5794e1491 407 Gene3D G3DSA:3.30.559.10 169 405 1.5E-91 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain YPO1114 669411f3a55a30bb060c97a5794e1491 407 PANTHER PTHR23151:SF47 4 407 4.9E-249 T 22-04-2016 YPO1114 669411f3a55a30bb060c97a5794e1491 407 SUPERFAMILY SSF51230 2 93 1.57E-24 T 22-04-2016 IPR011053 Single hybrid motif YPO1114 669411f3a55a30bb060c97a5794e1491 407 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 407 1.0E-189 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 YPO1114 669411f3a55a30bb060c97a5794e1491 407 Gene3D G3DSA:4.10.320.10 114 154 9.3E-19 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YPO1114 669411f3a55a30bb060c97a5794e1491 407 Pfam PF00364 Biotin-requiring enzyme 5 77 2.5E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YPO2803 e0838f49753485e8bc90c624a68c2a70 793 Gene3D G3DSA:3.40.50.1700 348 595 2.2E-60 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 Gene3D G3DSA:3.20.20.300 19 337 1.9E-97 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 361 593 4.4E-49 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 PANTHER PTHR30620 18 716 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 PANTHER PTHR30620:SF18 18 716 0.0 T 22-04-2016 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 Pfam PF14310 Fibronectin type III-like domain 632 702 9.1E-27 T 22-04-2016 IPR026891 Fibronectin type III-like domain YPO2803 e0838f49753485e8bc90c624a68c2a70 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 249 267 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 102 121 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 179 195 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 70 86 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 148 164 2.6E-34 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 70 328 5.7E-52 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 SUPERFAMILY SSF52279 361 595 4.18E-48 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 SUPERFAMILY SSF51445 19 360 2.0E-88 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO2803 e0838f49753485e8bc90c624a68c2a70 793 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 249 266 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 YPO2803 e0838f49753485e8bc90c624a68c2a70 793 SMART SM01217 632 702 5.1E-34 T 22-04-2016 IPR026891 Fibronectin type III-like domain YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PANTHER PTHR19375 19 49 0.0 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PANTHER PTHR19375 84 640 0.0 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Gene3D G3DSA:3.30.420.40 85 121 5.0E-53 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Gene3D G3DSA:3.30.420.40 20 41 5.0E-53 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Gene3D G3DSA:3.30.420.40 163 234 5.0E-53 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PANTHER PTHR19375:SF176 19 49 0.0 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PANTHER PTHR19375:SF176 84 640 0.0 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 650 44.188 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Gene3D G3DSA:3.30.420.40 235 272 5.7E-32 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Gene3D G3DSA:3.30.420.40 348 390 5.7E-32 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 SUPERFAMILY SSF100920 418 568 2.88E-51 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 SUPERFAMILY SSF53067 20 48 1.55E-46 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 SUPERFAMILY SSF53067 83 230 1.55E-46 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 366 380 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 76 649 2.3E-257 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 SUPERFAMILY SSF53067 234 411 3.67E-50 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PRINTS PR00301 70kDa heat shock protein signature 419 438 1.7E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PRINTS PR00301 70kDa heat shock protein signature 245 255 1.7E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PRINTS PR00301 70kDa heat shock protein signature 500 516 1.7E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PRINTS PR00301 70kDa heat shock protein signature 186 206 1.7E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.7E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PRINTS PR00301 70kDa heat shock protein signature 363 379 1.7E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 PRINTS PR00301 70kDa heat shock protein signature 394 414 1.7E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Gene3D G3DSA:2.60.34.10 421 561 6.1E-54 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Pfam PF00012 Hsp70 protein 79 633 2.8E-184 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 239 252 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Gene3D G3DSA:3.30.30.30 122 162 4.0E-8 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Gene3D G3DSA:3.90.640.10 273 343 1.7E-6 T 22-04-2016 YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 SUPERFAMILY SSF100934 538 649 5.1E-37 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YPO2892 e70ee846b0bf7d99e60443d4e8a60afd 650 Gene3D G3DSA:1.20.1270.10 562 649 1.0E-30 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YPO1117 082cb72adc2e2ac294aac9c2a69a8cd7 522 PANTHER PTHR30365 1 310 3.9E-273 T 22-04-2016 YPO1117 082cb72adc2e2ac294aac9c2a69a8cd7 522 PANTHER PTHR30365 376 520 3.9E-273 T 22-04-2016 YPO1117 082cb72adc2e2ac294aac9c2a69a8cd7 522 PIRSF PIRSF006446 1 521 9.5E-141 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 YPO1117 082cb72adc2e2ac294aac9c2a69a8cd7 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 4.1E-173 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 YPO1117 082cb72adc2e2ac294aac9c2a69a8cd7 522 PANTHER PTHR30365:SF0 1 310 3.9E-273 T 22-04-2016 YPO1117 082cb72adc2e2ac294aac9c2a69a8cd7 522 PANTHER PTHR30365:SF0 376 520 3.9E-273 T 22-04-2016 YPO0080 8865796c07b044d440dfa1ddb49c1fb9 272 PANTHER PTHR30632 1 272 3.5E-166 T 22-04-2016 YPO0080 8865796c07b044d440dfa1ddb49c1fb9 272 PANTHER PTHR30632:SF5 1 272 3.5E-166 T 22-04-2016 YPO0080 8865796c07b044d440dfa1ddb49c1fb9 272 Pfam PF13531 Bacterial extracellular solute-binding protein 48 269 4.0E-32 T 22-04-2016 YPO0080 8865796c07b044d440dfa1ddb49c1fb9 272 Gene3D G3DSA:3.40.190.10 168 227 1.0E-4 T 22-04-2016 YPO0080 8865796c07b044d440dfa1ddb49c1fb9 272 SUPERFAMILY SSF53850 47 271 1.25E-39 T 22-04-2016 YPO0080 8865796c07b044d440dfa1ddb49c1fb9 272 Gene3D G3DSA:3.40.190.10 47 167 4.4E-11 T 22-04-2016 YPO2558 1544725cfc452842b6b8c8763985d655 404 PANTHER PTHR11751 9 404 3.9E-195 T 22-04-2016 YPO2558 1544725cfc452842b6b8c8763985d655 404 Pfam PF00155 Aminotransferase class I and II 58 392 2.0E-45 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO2558 1544725cfc452842b6b8c8763985d655 404 Gene3D G3DSA:3.40.640.10 51 279 2.3E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO2558 1544725cfc452842b6b8c8763985d655 404 PANTHER PTHR11751:SF303 9 404 3.9E-195 T 22-04-2016 YPO2558 1544725cfc452842b6b8c8763985d655 404 Gene3D G3DSA:3.90.1150.10 280 403 1.4E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO2558 1544725cfc452842b6b8c8763985d655 404 SUPERFAMILY SSF53383 7 401 7.26E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO2662 578681d76e08ed7b6d926caf2ddf2a55 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 261 1.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2662 578681d76e08ed7b6d926caf2ddf2a55 268 Gene3D G3DSA:1.10.3720.10 64 262 3.1E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2662 578681d76e08ed7b6d926caf2ddf2a55 268 PANTHER PTHR30465 1 267 1.9E-203 T 22-04-2016 YPO2662 578681d76e08ed7b6d926caf2ddf2a55 268 SUPERFAMILY SSF161098 65 256 4.97E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2662 578681d76e08ed7b6d926caf2ddf2a55 268 PANTHER PTHR30465:SF50 1 267 1.9E-203 T 22-04-2016 YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 Pfam PF02449 Beta-galactosidase 19 392 3.5E-159 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 PIRSF PIRSF001084 6 684 5.0E-249 T 22-04-2016 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 Pfam PF08533 Beta-galactosidase C-terminal domain 626 682 1.2E-15 T 22-04-2016 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 PANTHER PTHR36447 1 686 1.7E-284 T 22-04-2016 YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 SUPERFAMILY SSF51445 13 372 6.02E-119 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 Gene3D G3DSA:3.40.50.880 401 616 2.6E-67 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 Pfam PF08532 Beta-galactosidase trimerisation domain 403 615 5.6E-79 T 22-04-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 PANTHER PTHR36447:SF1 1 686 1.7E-284 T 22-04-2016 YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 SUPERFAMILY SSF52317 400 615 5.04E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO0852 a692814ac45ff6bcfaf6acbbd6a62232 686 Gene3D G3DSA:3.20.20.80 16 395 6.2E-129 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO0300 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0300 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO0300 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0300 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO0300 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0300 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0018 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0018 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO0018 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0018 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO0018 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0018 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0534 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0534 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO0534 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0534 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO0534 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0534 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1173 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1173 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO1173 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1173 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO1173 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1173 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3195 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3195 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO3195 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3195 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO3195 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3195 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2023 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2023 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO2023 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2023 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO2023 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2023 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1263 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1263 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO1263 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1263 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO1263 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1263 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0583 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0583 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO0583 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0583 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO0583 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0583 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2900 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2900 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO2900 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2900 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO2900 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2900 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2764 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2764 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO2764 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2764 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO2764 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2764 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0356 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0356 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO0356 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0356 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO0356 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0356 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3416 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3416 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO3416 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3416 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO3416 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3416 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3280 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3280 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO3280 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3280 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO3280 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3280 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1521 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1521 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO1521 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1521 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO1521 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1521 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1164 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1164 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO1164 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1164 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO1164 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1164 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1602 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1602 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO1602 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1602 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO1602 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1602 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2826 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2826 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO2826 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2826 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO2826 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2826 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3745 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3745 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO3745 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3745 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO3745 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3745 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2985 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2985 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO2985 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2985 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO2985 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2985 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0204 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0204 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO0204 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0204 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO0204 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0204 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3060 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3060 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO3060 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3060 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO3060 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3060 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3535 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3535 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO3535 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3535 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO3535 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3535 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0487 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0487 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO0487 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0487 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO0487 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0487 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3810 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3810 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO3810 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3810 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO3810 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3810 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2629 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2629 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO2629 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2629 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO2629 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2629 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0479 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0479 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO0479 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0479 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO0479 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0479 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0696 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0696 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO0696 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0696 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO0696 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0696 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1223 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1223 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO1223 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1223 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO1223 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1223 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1424 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1424 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO1424 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1424 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO1424 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1424 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1434 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1434 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO1434 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1434 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO1434 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1434 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1036 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1036 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO1036 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1036 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO1036 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO1036 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2869 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2869 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO2869 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2869 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO2869 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2869 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3329 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3329 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO3329 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3329 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO3329 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3329 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3567 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3567 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO3567 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3567 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO3567 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3567 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2928 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2928 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO2928 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2928 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO2928 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2928 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2343 2f72638d939d64c3e747112eb659c1ff 152 Gene3D G3DSA:3.30.70.1290 2 132 1.2E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2343 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360 2 145 3.9E-95 T 22-04-2016 YPO2343 2f72638d939d64c3e747112eb659c1ff 152 SUPERFAMILY SSF143422 1 129 1.03E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2343 2f72638d939d64c3e747112eb659c1ff 152 PANTHER PTHR33360:SF2 2 145 3.9E-95 T 22-04-2016 YPO2343 2f72638d939d64c3e747112eb659c1ff 152 SMART SM01321 11 129 2.7E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO2343 2f72638d939d64c3e747112eb659c1ff 152 Pfam PF01797 Transposase IS200 like 12 129 3.9E-36 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 SUPERFAMILY SSF51905 1 56 1.87E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 SUPERFAMILY SSF51905 114 370 1.87E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 Gene3D G3DSA:3.30.390.30 354 467 1.5E-25 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PANTHER PTHR22912:SF176 138 467 0.0 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PANTHER PTHR22912:SF176 1 122 0.0 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 SUPERFAMILY SSF55424 353 471 1.72E-25 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 Gene3D G3DSA:3.50.50.60 160 273 2.7E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 1.8E-19 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 1.8E-19 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.8E-19 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 1.8E-19 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.8E-19 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 331 1.0E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 2.1E-40 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.1E-40 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 2.1E-40 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 2.1E-40 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 2.1E-40 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 2.1E-40 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-40 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 458 2.1E-40 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.1E-40 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 463 3.5E-18 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 Gene3D G3DSA:3.50.50.60 274 341 3.6E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 Gene3D G3DSA:3.50.50.60 5 151 3.6E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PIRSF PIRSF000350 2 472 8.5E-58 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PANTHER PTHR22912 138 467 0.0 T 22-04-2016 YPO3917 41a6449ae41dbffed1c5bd2f1d19549d 487 PANTHER PTHR22912 1 122 0.0 T 22-04-2016 YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 Gene3D G3DSA:1.10.10.60 9 39 1.1E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 SMART SM00382 441 575 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 SUPERFAMILY SSF53098 118 290 9.1E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 SUPERFAMILY SSF46689 12 86 3.34E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 Gene3D G3DSA:3.40.50.300 410 574 1.3E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 SUPERFAMILY SSF52540 410 593 5.82E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 Gene3D G3DSA:3.30.420.10 118 288 1.3E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 Pfam PF01695 IstB-like ATP binding protein 396 575 5.3E-71 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 2.3E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO3125 eafb4b6218cb3bf3bb58c2c093675de1 599 Pfam PF00665 Integrase core domain 118 243 2.8E-25 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 SUPERFAMILY SSF53623 95 308 1.83E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 58.928 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 3.3E-258 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 SUPERFAMILY SSF53244 312 449 9.03E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 Pfam PF08245 Mur ligase middle domain 108 291 1.2E-18 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 Pfam PF01225 Mur ligase family, catalytic domain 2 98 1.6E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 Gene3D G3DSA:3.40.1190.10 92 313 7.5E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 6.8E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 Gene3D G3DSA:3.90.190.20 314 450 7.5E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 SUPERFAMILY SSF51984 1 90 3.79E-23 T 22-04-2016 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 Gene3D G3DSA:3.40.50.720 1 90 1.6E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 PANTHER PTHR23135 1 440 0.0 T 22-04-2016 YPO3519 22dd3eaccc9d9b876b105bfdcdd2711c 460 PANTHER PTHR23135:SF17 1 440 0.0 T 22-04-2016 YPO2244 5ede9681d14b8b3a213479995402ef0e 620 PANTHER PTHR11780:SF1 13 482 3.5E-259 T 22-04-2016 YPO2244 5ede9681d14b8b3a213479995402ef0e 620 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 620 234.634 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 YPO2244 5ede9681d14b8b3a213479995402ef0e 620 SUPERFAMILY SSF46548 336 444 8.55E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPO2244 5ede9681d14b8b3a213479995402ef0e 620 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 1.1E-179 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 YPO2244 5ede9681d14b8b3a213479995402ef0e 620 Gene3D G3DSA:1.10.1060.10 367 445 1.1E-19 T 22-04-2016 YPO2244 5ede9681d14b8b3a213479995402ef0e 620 Pfam PF13237 4Fe-4S dicluster domain 373 427 2.4E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2244 5ede9681d14b8b3a213479995402ef0e 620 Pfam PF10531 SLBB domain 296 344 8.0E-11 T 22-04-2016 IPR019554 Soluble ligand binding domain YPO2244 5ede9681d14b8b3a213479995402ef0e 620 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 8.0E-48 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain YPO2244 5ede9681d14b8b3a213479995402ef0e 620 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.3E-28 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain YPO2244 5ede9681d14b8b3a213479995402ef0e 620 PANTHER PTHR11780 13 482 3.5E-259 T 22-04-2016 YPO2244 5ede9681d14b8b3a213479995402ef0e 620 SUPERFAMILY SSF142019 94 303 1.7E-59 T 22-04-2016 YPO2244 5ede9681d14b8b3a213479995402ef0e 620 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2244 5ede9681d14b8b3a213479995402ef0e 620 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO1565 72d1924587f5db8d45dd9e04be969e07 246 SUPERFAMILY SSF51735 4 245 3.95E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PANTHER PTHR24321:SF5 1 246 1.9E-191 T 22-04-2016 YPO1565 72d1924587f5db8d45dd9e04be969e07 246 Gene3D G3DSA:3.40.50.720 2 245 1.4E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 5.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 5.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 5.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PANTHER PTHR24321 1 246 1.9E-191 T 22-04-2016 YPO1565 72d1924587f5db8d45dd9e04be969e07 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 130 158 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO1565 72d1924587f5db8d45dd9e04be969e07 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 5.5E-57 T 22-04-2016 YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1565 72d1924587f5db8d45dd9e04be969e07 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3323 36efdaa7675f733f4fd5453859810b95 286 PANTHER PTHR38095 2 286 2.4E-164 T 22-04-2016 YPO3323 36efdaa7675f733f4fd5453859810b95 286 PANTHER PTHR38095:SF2 2 286 2.4E-164 T 22-04-2016 YPO3323 36efdaa7675f733f4fd5453859810b95 286 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 276 1.1E-98 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 YPO1906 6f54ca2bb463f1a1f901d18759d74029 673 SUPERFAMILY SSF56935 19 672 4.45E-94 T 22-04-2016 YPO1906 6f54ca2bb463f1a1f901d18759d74029 673 PANTHER PTHR32552:SF11 1 672 1.7E-294 T 22-04-2016 YPO1906 6f54ca2bb463f1a1f901d18759d74029 673 PANTHER PTHR32552 1 672 1.7E-294 T 22-04-2016 YPO1906 6f54ca2bb463f1a1f901d18759d74029 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 149 1.8E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO1906 6f54ca2bb463f1a1f901d18759d74029 673 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 672 2.1E-149 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPO1906 6f54ca2bb463f1a1f901d18759d74029 673 Gene3D G3DSA:2.40.170.20 153 672 3.9E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1906 6f54ca2bb463f1a1f901d18759d74029 673 Pfam PF00593 TonB dependent receptor 434 669 8.4E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1906 6f54ca2bb463f1a1f901d18759d74029 673 Gene3D G3DSA:2.170.130.10 22 152 2.6E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 SUPERFAMILY SSF54980 393 468 4.32E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.19 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 SUPERFAMILY SSF50447 262 393 9.94E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 5.7E-46 T 22-04-2016 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 Gene3D G3DSA:3.30.70.870 395 463 2.6E-13 T 22-04-2016 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 162 1.2E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 PANTHER PTHR23115 1 184 8.3E-256 T 22-04-2016 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 PANTHER PTHR23115 251 472 8.3E-256 T 22-04-2016 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 0.0 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 SUPERFAMILY SSF52540 10 277 1.86E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 5.9E-13 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 3.1E-46 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 PANTHER PTHR23115:SF69 1 184 8.3E-256 T 22-04-2016 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 PANTHER PTHR23115:SF69 251 472 8.3E-256 T 22-04-2016 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 Gene3D G3DSA:2.40.30.10 293 394 7.4E-26 T 22-04-2016 YPO0430 81fcedc547f57ed3e31d7c35d2359a1c 529 Gene3D G3DSA:3.40.50.300 11 282 2.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3471 1d20e8b62c73895c4efcfc64a8326f61 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 291 1.5E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3471 1d20e8b62c73895c4efcfc64a8326f61 294 PANTHER PTHR30193 7 294 2.1E-115 T 22-04-2016 YPO3471 1d20e8b62c73895c4efcfc64a8326f61 294 PANTHER PTHR30193:SF6 7 294 2.1E-115 T 22-04-2016 YPO3471 1d20e8b62c73895c4efcfc64a8326f61 294 SUPERFAMILY SSF161098 55 282 8.24E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3471 1d20e8b62c73895c4efcfc64a8326f61 294 Gene3D G3DSA:1.10.3720.10 62 283 1.8E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 SUPERFAMILY SSF90123 3 321 1.83E-75 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 PANTHER PTHR24221 1 570 4.0E-254 T 22-04-2016 YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 Pfam PF00005 ABC transporter 350 498 3.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 PANTHER PTHR24221:SF240 1 570 4.0E-254 T 22-04-2016 YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 SMART SM00382 358 544 2.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 SUPERFAMILY SSF52540 322 569 5.21E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 Pfam PF00664 ABC transporter transmembrane region 17 287 4.9E-52 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 Gene3D G3DSA:3.40.50.300 333 562 2.4E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1735 c6dde945b558b9266250d8f3d00dfe62 572 Gene3D G3DSA:1.20.1560.10 3 315 8.4E-71 T 22-04-2016 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 PANTHER PTHR11689 1 414 2.2E-77 T 22-04-2016 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 Pfam PF00654 Voltage gated chloride channel 65 404 5.0E-76 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 SUPERFAMILY SSF81340 2 413 1.96E-85 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 Hamap MF_01203 Voltage-gated ClC-type chloride channel ClcB [clcB]. 4 414 40.506 T 22-04-2016 IPR023790 Chloride channel, voltage-gated, ClcB GO:0006821|GO:0010447 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 Gene3D G3DSA:1.10.3080.10 2 414 4.8E-75 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 PRINTS PR00762 Chloride channel signature 104 123 3.6E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 PRINTS PR00762 Chloride channel signature 318 338 3.6E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 PRINTS PR00762 Chloride channel signature 371 390 3.6E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 PRINTS PR00762 Chloride channel signature 154 173 3.6E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO2270 e409de5e6e7933789b7ffa7098e9295c 414 PRINTS PR00762 Chloride channel signature 353 369 3.6E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 Gene3D G3DSA:3.40.1030.10 74 329 2.4E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 SUPERFAMILY SSF52418 70 328 5.63E-92 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 Gene3D G3DSA:1.20.970.10 2 68 6.3E-25 T 22-04-2016 YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 38.945 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 PANTHER PTHR11922:SF25 67 325 7.8E-125 T 22-04-2016 YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 329 2.9E-126 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 PANTHER PTHR11922 67 325 7.8E-125 T 22-04-2016 YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 Pfam PF00591 Glycosyl transferase family, a/b domain 74 321 6.9E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 62 7.3E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPO2206 c0ab30c071a81ce468288fcf05b8ebca 332 SUPERFAMILY SSF47648 1 67 2.35E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 PANTHER PTHR10264:SF80 4 156 9.1E-121 T 22-04-2016 YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 PANTHER PTHR10264:SF80 194 332 9.1E-121 T 22-04-2016 YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 Gene3D G3DSA:3.40.50.1010 307 324 5.5E-4 T 22-04-2016 IPR029060 PIN domain-like YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 Gene3D G3DSA:3.40.50.1010 163 182 5.5E-4 T 22-04-2016 IPR029060 PIN domain-like YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 Pfam PF01145 SPFH domain / Band 7 family 22 241 1.4E-34 T 22-04-2016 IPR001107 Band 7 domain YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 PIRSF PIRSF005651 1 334 5.5E-106 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 SMART SM00244 18 225 1.1E-42 T 22-04-2016 IPR001107 Band 7 domain YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 TIGRFAM TIGR01932 hflC: HflC protein 1 325 6.0E-138 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 PANTHER PTHR10264 4 156 9.1E-121 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 PANTHER PTHR10264 194 332 9.1E-121 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 SUPERFAMILY SSF117892 195 231 9.29E-8 T 22-04-2016 IPR001107 Band 7 domain YPO0376 c408f0cbfe17e226ce1091808c0f509c 334 SUPERFAMILY SSF117892 56 156 1.44E-16 T 22-04-2016 IPR001107 Band 7 domain YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 SMART SM00387 242 351 4.3E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 350 3.4E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 Gene3D G3DSA:3.30.565.10 209 351 2.5E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 195 5.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 SMART SM00388 136 196 4.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 PANTHER PTHR24423:SF538 77 348 2.6E-187 T 22-04-2016 YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 Gene3D G3DSA:1.10.287.130 129 192 7.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 Pfam PF00672 HAMP domain 65 130 3.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 SUPERFAMILY SSF47384 121 194 7.85E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 SUPERFAMILY SSF55874 186 349 1.7E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3508 da4cd3168489fc3ee9c8ed1ea342a1cc 355 PANTHER PTHR24423 77 348 2.6E-187 T 22-04-2016 YPO3868 d35a787a906916ffd87744da48c7208c 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPO3868 d35a787a906916ffd87744da48c7208c 108 PANTHER PTHR10438 3 108 6.9E-42 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPO3868 d35a787a906916ffd87744da48c7208c 108 Gene3D G3DSA:3.40.30.10 2 107 3.2E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3868 d35a787a906916ffd87744da48c7208c 108 PIRSF PIRSF000077 2 108 3.3E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPO3868 d35a787a906916ffd87744da48c7208c 108 PRINTS PR00421 Thioredoxin family signature 24 32 6.1E-10 T 22-04-2016 YPO3868 d35a787a906916ffd87744da48c7208c 108 PRINTS PR00421 Thioredoxin family signature 32 41 6.1E-10 T 22-04-2016 YPO3868 d35a787a906916ffd87744da48c7208c 108 PRINTS PR00421 Thioredoxin family signature 72 83 6.1E-10 T 22-04-2016 YPO3868 d35a787a906916ffd87744da48c7208c 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 9.3E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPO3868 d35a787a906916ffd87744da48c7208c 108 Pfam PF00085 Thioredoxin 5 106 5.1E-34 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 YPO3868 d35a787a906916ffd87744da48c7208c 108 SUPERFAMILY SSF52833 2 107 1.03E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2227 b2d540da210fe3bfc502c1533725f74f 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO2227 b2d540da210fe3bfc502c1533725f74f 245 Gene3D G3DSA:3.20.20.70 14 240 3.6E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2227 b2d540da210fe3bfc502c1533725f74f 245 PANTHER PTHR32119 2 242 6.1E-131 T 22-04-2016 YPO2227 b2d540da210fe3bfc502c1533725f74f 245 PANTHER PTHR32119:SF2 2 242 6.1E-131 T 22-04-2016 YPO2227 b2d540da210fe3bfc502c1533725f74f 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 18 237 3.2E-56 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO2227 b2d540da210fe3bfc502c1533725f74f 245 SMART SM00934 16 237 3.4E-102 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO2227 b2d540da210fe3bfc502c1533725f74f 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 1.1E-55 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO2227 b2d540da210fe3bfc502c1533725f74f 245 SUPERFAMILY SSF51366 14 240 1.36E-80 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPO2227 b2d540da210fe3bfc502c1533725f74f 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.676 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 SUPERFAMILY SSF50182 939 1004 1.11E-16 T 22-04-2016 IPR010920 LSM domain YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 Gene3D G3DSA:2.30.30.60 954 1003 2.1E-17 T 22-04-2016 YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 Gene3D G3DSA:3.30.70.100 1009 1093 1.7E-22 T 22-04-2016 YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 PANTHER PTHR30347:SF2 19 1127 0.0 T 22-04-2016 YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 517 835 1.5E-100 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 Pfam PF12795 Mechanosensitive ion channel porin domain 59 297 1.4E-61 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 SUPERFAMILY SSF82689 1006 1106 3.92E-26 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 968 1002 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 SUPERFAMILY SSF82861 854 937 1.7E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 Pfam PF00924 Mechanosensitive ion channel 896 1095 2.7E-58 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YPO3129 2abae104eb6ddb7061b2c0a846410a16 1139 PANTHER PTHR30347 19 1127 0.0 T 22-04-2016 YPO1129 49e2468dfb69696961e860879d3ad1b9 312 Pfam PF01545 Cation efflux family 16 208 2.0E-54 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO1129 49e2468dfb69696961e860879d3ad1b9 312 PANTHER PTHR11562:SF17 9 296 9.8E-113 T 22-04-2016 YPO1129 49e2468dfb69696961e860879d3ad1b9 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 1.2E-96 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO1129 49e2468dfb69696961e860879d3ad1b9 312 Hamap MF_00552 Zinc transporter ZitB [zitB]. 3 307 66.253 T 22-04-2016 IPR023500 Zinc transporter ZitB GO:0005385|GO:0006829|GO:0016020 YPO1129 49e2468dfb69696961e860879d3ad1b9 312 SUPERFAMILY SSF160240 212 287 5.1E-9 T 22-04-2016 YPO1129 49e2468dfb69696961e860879d3ad1b9 312 PANTHER PTHR11562 9 296 9.8E-113 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO1129 49e2468dfb69696961e860879d3ad1b9 312 SUPERFAMILY SSF161111 10 209 2.75E-63 T 22-04-2016 YPO1129 49e2468dfb69696961e860879d3ad1b9 312 Gene3D G3DSA:1.20.1510.10 12 208 7.9E-68 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain YPO1563 22fe0360d3726d946b7596653d0c8be2 466 Gene3D G3DSA:1.20.1250.20 53 251 2.3E-38 T 22-04-2016 YPO1563 22fe0360d3726d946b7596653d0c8be2 466 PANTHER PTHR11662:SF3 19 454 1.6E-149 T 22-04-2016 YPO1563 22fe0360d3726d946b7596653d0c8be2 466 Pfam PF07690 Major Facilitator Superfamily 59 420 1.5E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1563 22fe0360d3726d946b7596653d0c8be2 466 Gene3D G3DSA:1.20.1250.20 276 456 2.6E-10 T 22-04-2016 YPO1563 22fe0360d3726d946b7596653d0c8be2 466 SUPERFAMILY SSF103473 34 462 8.89E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1563 22fe0360d3726d946b7596653d0c8be2 466 PANTHER PTHR11662 19 454 1.6E-149 T 22-04-2016 YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Gene3D G3DSA:2.60.40.1070 147 237 1.0E-10 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 143 7.7E-41 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 SUPERFAMILY SSF49584 137 237 8.11E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PANTHER PTHR30251 1 245 3.5E-139 T 22-04-2016 YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PANTHER PTHR30251:SF7 1 245 3.5E-139 T 22-04-2016 YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Gene3D G3DSA:2.60.40.360 21 144 2.3E-39 T 22-04-2016 IPR008962 PapD-like YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 98 115 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 70 91 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 164 179 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 21 30 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 PRINTS PR00969 Pili chaperone signature 125 140 3.7E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 SUPERFAMILY SSF49354 17 143 2.12E-38 T 22-04-2016 IPR008962 PapD-like YPO1918 aa58f5aaf1ab3a34daf99ed8b7c4350c 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 236 5.3E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO2538 f0af4cef9695918e79ed70ad80d8a631 427 Pfam PF02638 Glycosyl hydrolase-like 10 43 377 7.7E-102 T 22-04-2016 IPR003790 Glycosyl hydrolase-like 10 YPO2538 f0af4cef9695918e79ed70ad80d8a631 427 Gene3D G3DSA:3.20.20.80 132 265 4.8E-6 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO2538 f0af4cef9695918e79ed70ad80d8a631 427 PANTHER PTHR30032:SF2 250 418 2.6E-103 T 22-04-2016 YPO2538 f0af4cef9695918e79ed70ad80d8a631 427 PANTHER PTHR30032:SF2 28 230 2.6E-103 T 22-04-2016 YPO2538 f0af4cef9695918e79ed70ad80d8a631 427 PANTHER PTHR30032 250 418 2.6E-103 T 22-04-2016 YPO2538 f0af4cef9695918e79ed70ad80d8a631 427 PANTHER PTHR30032 28 230 2.6E-103 T 22-04-2016 YPO2538 f0af4cef9695918e79ed70ad80d8a631 427 SUPERFAMILY SSF51445 70 364 6.58E-32 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO2716 d033e8c484aea615f05c8b2f91635f80 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPO2716 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 7.1E-52 T 22-04-2016 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF00679 Elongation factor G C-terminus 399 482 5.9E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPO2716 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.0E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:2.40.30.10 193 289 3.3E-24 T 22-04-2016 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 SUPERFAMILY SSF54980 292 370 3.02E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO2716 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.30.70.870 291 369 9.9E-26 T 22-04-2016 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.40.50.300 2 192 4.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2716 d033e8c484aea615f05c8b2f91635f80 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 169 6.8E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.814 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 PANTHER PTHR23115:SF175 397 595 4.5E-279 T 22-04-2016 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 PANTHER PTHR23115:SF175 2 373 4.5E-279 T 22-04-2016 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 PANTHER PTHR23115 397 595 4.5E-279 T 22-04-2016 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 PANTHER PTHR23115 2 373 4.5E-279 T 22-04-2016 YPO2716 d033e8c484aea615f05c8b2f91635f80 599 SUPERFAMILY SSF52540 2 234 1.32E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2716 d033e8c484aea615f05c8b2f91635f80 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.5E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal YPO2716 d033e8c484aea615f05c8b2f91635f80 599 SUPERFAMILY SSF54980 399 493 2.11E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO2716 d033e8c484aea615f05c8b2f91635f80 599 Gene3D G3DSA:3.30.70.240 401 489 1.5E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPO2716 d033e8c484aea615f05c8b2f91635f80 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.1E-300 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 PANTHER PTHR22931 1 272 0.0 T 22-04-2016 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 PANTHER PTHR22931 288 790 0.0 T 22-04-2016 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 791 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.30.470.20 200 356 9.7E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 SUPERFAMILY SSF52009 351 469 7.98E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 SUPERFAMILY SSF56059 10 387 2.94E-106 T 22-04-2016 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 6.6E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.50.30.10 377 473 1.2E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 PIRSF PIRSF000854 6 794 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 SUPERFAMILY SSF51621 470 792 3.4E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 4.6E-117 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 PANTHER PTHR22931:SF7 1 272 0.0 T 22-04-2016 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 PANTHER PTHR22931:SF7 288 790 0.0 T 22-04-2016 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 790 3.7E-60 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.20.20.60 485 792 1.2E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2409 5437b08f4b94821e8d6d836728510ceb 794 Gene3D G3DSA:3.30.1490.20 10 198 2.6E-67 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 669 28.253 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 Pfam PF01266 FAD dependent oxidoreductase 266 644 9.8E-54 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 PANTHER PTHR13847 615 680 1.2E-190 T 22-04-2016 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 PANTHER PTHR13847:SF182 226 589 1.2E-190 T 22-04-2016 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 PANTHER PTHR13847:SF182 615 680 1.2E-190 T 22-04-2016 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 674 4.3E-157 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 Gene3D G3DSA:3.40.50.150 11 250 1.1E-102 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 SUPERFAMILY SSF53335 138 242 4.32E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 PANTHER PTHR13847 226 589 1.2E-190 T 22-04-2016 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 SUPERFAMILY SSF51905 575 586 2.07E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 SUPERFAMILY SSF51905 618 673 2.07E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 SUPERFAMILY SSF51905 266 482 2.07E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 Gene3D G3DSA:3.50.50.60 614 666 1.7E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 Gene3D G3DSA:3.50.50.60 575 582 1.7E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 Gene3D G3DSA:3.50.50.60 265 344 1.7E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 Gene3D G3DSA:3.50.50.60 399 481 1.7E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2756 36d3be2e5baab1e35dbfb7331105eb26 689 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 1.4E-49 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 YPO0531 758b3656461bd525d63cf76485fada09 476 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 Gene3D G3DSA:3.40.1060.10 172 287 1.7E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 Gene3D G3DSA:3.30.499.10 8 164 3.0E-24 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 7 472 61.757 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 Gene3D G3DSA:3.30.499.10 341 474 1.8E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PANTHER PTHR11670:SF38 333 475 1.0E-272 T 22-04-2016 YPO0531 758b3656461bd525d63cf76485fada09 476 PANTHER PTHR11670:SF38 9 313 1.0E-272 T 22-04-2016 YPO0531 758b3656461bd525d63cf76485fada09 476 ProSitePatterns PS01244 Aconitase family signature 2. 405 418 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PANTHER PTHR11670 333 475 1.0E-272 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PANTHER PTHR11670 9 313 1.0E-272 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 8 471 1.6E-266 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 Pfam PF00330 Aconitase family (aconitate hydratase) 14 463 6.3E-157 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 SUPERFAMILY SSF53732 7 472 1.31E-168 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 139 154 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 349 360 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 88 101 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 215 228 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 292 306 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 201 214 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 114 122 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 125 138 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0531 758b3656461bd525d63cf76485fada09 476 PRINTS PR00415 Aconitase family signature 405 418 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO1973 6b6d2dd154abef723dee76cf50f47915 255 SMART SM00866 105 242 1.6E-33 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPO1973 6b6d2dd154abef723dee76cf50f47915 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1973 6b6d2dd154abef723dee76cf50f47915 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1973 6b6d2dd154abef723dee76cf50f47915 255 SUPERFAMILY SSF64288 72 248 7.38E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO1973 6b6d2dd154abef723dee76cf50f47915 255 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 249 8.3E-108 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 YPO1973 6b6d2dd154abef723dee76cf50f47915 255 SUPERFAMILY SSF46785 19 88 1.51E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1973 6b6d2dd154abef723dee76cf50f47915 255 PANTHER PTHR11751 17 108 7.7E-46 T 22-04-2016 YPO1973 6b6d2dd154abef723dee76cf50f47915 255 Gene3D G3DSA:1.10.10.10 18 90 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1973 6b6d2dd154abef723dee76cf50f47915 255 Gene3D G3DSA:3.40.1410.10 102 238 3.7E-50 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO1973 6b6d2dd154abef723dee76cf50f47915 255 Pfam PF07702 UTRA domain 105 242 1.5E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPO1973 6b6d2dd154abef723dee76cf50f47915 255 PANTHER PTHR11751:SF364 17 108 7.7E-46 T 22-04-2016 YPO1973 6b6d2dd154abef723dee76cf50f47915 255 SMART SM00345 25 84 2.1E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1973 6b6d2dd154abef723dee76cf50f47915 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 2.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO2775 ddab0767949494ef2d41ef0a9fcb44fd 228 Gene3D G3DSA:1.10.3720.10 7 219 4.6E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2775 ddab0767949494ef2d41ef0a9fcb44fd 228 SUPERFAMILY SSF161098 8 205 4.71E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2775 ddab0767949494ef2d41ef0a9fcb44fd 228 PANTHER PTHR30133:SF1 1 228 9.1E-182 T 22-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 YPO2775 ddab0767949494ef2d41ef0a9fcb44fd 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 3.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2775 ddab0767949494ef2d41ef0a9fcb44fd 228 PANTHER PTHR30133 1 228 9.1E-182 T 22-04-2016 YPO2775 ddab0767949494ef2d41ef0a9fcb44fd 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 3.5E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO1974 c130fd74c451c2559e5c8a67b3dbd169 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 453 2.9E-228 T 22-04-2016 IPR010252 Formiminoglutamate deiminase YPO1974 c130fd74c451c2559e5c8a67b3dbd169 456 PANTHER PTHR11271 15 454 1.9E-216 T 22-04-2016 YPO1974 c130fd74c451c2559e5c8a67b3dbd169 456 Pfam PF01979 Amidohydrolase family 48 429 2.5E-30 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPO1974 c130fd74c451c2559e5c8a67b3dbd169 456 SUPERFAMILY SSF51556 50 375 1.06E-68 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO1974 c130fd74c451c2559e5c8a67b3dbd169 456 PANTHER PTHR11271:SF4 15 454 1.9E-216 T 22-04-2016 IPR010252 Formiminoglutamate deiminase YPO1974 c130fd74c451c2559e5c8a67b3dbd169 456 Gene3D G3DSA:3.20.20.140 54 396 9.9E-73 T 22-04-2016 YPO1974 c130fd74c451c2559e5c8a67b3dbd169 456 SUPERFAMILY SSF51338 356 434 1.89E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO3135 0ae7c15400a099c15f6340fee359fa55 47 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.002 T 22-04-2016 YPO3135 0ae7c15400a099c15f6340fee359fa55 47 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.5E-9 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3135 0ae7c15400a099c15f6340fee359fa55 47 SUPERFAMILY SSF57840 8 41 7.59E-14 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3135 0ae7c15400a099c15f6340fee359fa55 47 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.15 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3135 0ae7c15400a099c15f6340fee359fa55 47 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3135 0ae7c15400a099c15f6340fee359fa55 47 PANTHER PTHR18804 1 47 4.1E-23 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3135 0ae7c15400a099c15f6340fee359fa55 47 Pfam PF00444 Ribosomal protein L36 1 41 2.6E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3135 0ae7c15400a099c15f6340fee359fa55 47 PANTHER PTHR18804:SF11 1 47 4.1E-23 T 22-04-2016 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 4.4E-154 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 5.9E-24 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 SMART SM00387 28 174 1.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PANTHER PTHR10169:SF45 1 630 0.0 T 22-04-2016 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 SUPERFAMILY SSF54211 218 383 3.03E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PANTHER PTHR10169 1 630 0.0 T 22-04-2016 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 SMART SM00433 35 625 6.0E-209 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 SUPERFAMILY SSF56719 389 622 2.28E-77 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 8.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.062 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 Pfam PF01751 Toprim domain 414 523 3.2E-12 T 22-04-2016 IPR006171 Toprim domain YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 SUPERFAMILY SSF55874 6 216 7.46E-69 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 Gene3D G3DSA:3.30.565.10 16 216 1.4E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 171 3.6E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 Pfam PF00204 DNA gyrase B 219 385 1.9E-39 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 Gene3D G3DSA:3.40.50.670 399 611 2.0E-75 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0668 1761fbaf7278fb225fc610e65dbc2dee 631 Gene3D G3DSA:3.30.230.10 218 391 3.8E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO1182 5890e2ea2cc8bc3ae30004f061c29149 278 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 25 269 2.2E-91 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 YPO1182 5890e2ea2cc8bc3ae30004f061c29149 278 PANTHER PTHR24220:SF408 26 277 2.4E-121 T 22-04-2016 YPO1182 5890e2ea2cc8bc3ae30004f061c29149 278 SMART SM00382 50 258 1.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1182 5890e2ea2cc8bc3ae30004f061c29149 278 Pfam PF00005 ABC transporter 41 202 1.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1182 5890e2ea2cc8bc3ae30004f061c29149 278 Gene3D G3DSA:3.40.50.300 23 261 4.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1182 5890e2ea2cc8bc3ae30004f061c29149 278 SUPERFAMILY SSF52540 24 261 1.45E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1182 5890e2ea2cc8bc3ae30004f061c29149 278 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1182 5890e2ea2cc8bc3ae30004f061c29149 278 PANTHER PTHR24220 26 277 2.4E-121 T 22-04-2016 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 PANTHER PTHR30389:SF6 2 546 0.0 T 22-04-2016 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 75 323 5.4E-31 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 Gene3D G3DSA:3.20.130.10 348 537 1.8E-75 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 Pfam PF05681 Fumarate hydratase (Fumerase) 51 325 3.5E-84 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 PIRSF PIRSF001394 30 547 2.0E-231 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 SUPERFAMILY SSF117457 361 536 3.79E-63 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 PANTHER PTHR30389 2 546 0.0 T 22-04-2016 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 Pfam PF05683 Fumarase C-terminus 332 537 5.6E-94 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YPO3335 1472f2789f9ec4093725c13fd8fe68db 547 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 2.6E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YPO2616 7afa322bf220e9636b96e933b36cf5d0 515 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 459 1.6E-108 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 YPO2616 7afa322bf220e9636b96e933b36cf5d0 515 Pfam PF00795 Carbon-nitrogen hydrolase 224 476 4.1E-38 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO2616 7afa322bf220e9636b96e933b36cf5d0 515 SUPERFAMILY SSF56317 216 491 5.49E-40 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO2616 7afa322bf220e9636b96e933b36cf5d0 515 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 496 24.545 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 YPO2616 7afa322bf220e9636b96e933b36cf5d0 515 PANTHER PTHR38686 2 515 2.2E-185 T 22-04-2016 YPO2616 7afa322bf220e9636b96e933b36cf5d0 515 Gene3D G3DSA:3.60.110.10 216 488 2.2E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 PIRSF PIRSF006769 1 368 3.0E-127 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 Gene3D G3DSA:3.40.430.10 131 363 1.6E-68 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 Gene3D G3DSA:3.40.140.10 4 130 2.0E-33 T 22-04-2016 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 1.2E-70 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 SUPERFAMILY SSF53927 4 146 2.3E-47 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 PANTHER PTHR11079:SF10 1 215 8.2E-70 T 22-04-2016 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 SUPERFAMILY SSF53597 145 363 8.83E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 Pfam PF01872 RibD C-terminal domain 148 360 1.6E-57 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 2.3E-141 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 1.5E-19 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 YPO3183 7c90c704fe1e6282b6ae3cba310918a2 369 PANTHER PTHR11079 1 215 8.2E-70 T 22-04-2016 YPO3155 f89865f9bec855ee7200119bdb887e77 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YPO3155 f89865f9bec855ee7200119bdb887e77 784 SUPERFAMILY SSF88697 10 201 7.46E-53 T 22-04-2016 IPR015947 PUA-like domain YPO3155 f89865f9bec855ee7200119bdb887e77 784 SMART SM00464 10 202 5.0E-84 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 YPO3155 f89865f9bec855ee7200119bdb887e77 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 YPO3155 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 4.0E-56 T 22-04-2016 YPO3155 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 4.0E-56 T 22-04-2016 YPO3155 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 4.0E-56 T 22-04-2016 YPO3155 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 4.0E-56 T 22-04-2016 YPO3155 f89865f9bec855ee7200119bdb887e77 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 4.0E-56 T 22-04-2016 YPO3155 f89865f9bec855ee7200119bdb887e77 784 PANTHER PTHR10046:SF43 8 776 0.0 T 22-04-2016 YPO3155 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:3.40.50.300 312 499 2.4E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3155 f89865f9bec855ee7200119bdb887e77 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.2E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO3155 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:3.30.230.10 590 771 7.4E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO3155 f89865f9bec855ee7200119bdb887e77 784 Gene3D G3DSA:1.10.8.60 500 583 2.7E-33 T 22-04-2016 YPO3155 f89865f9bec855ee7200119bdb887e77 784 SUPERFAMILY SSF52540 313 586 3.95E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3155 f89865f9bec855ee7200119bdb887e77 784 PANTHER PTHR10046 8 776 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 YPO3155 f89865f9bec855ee7200119bdb887e77 784 PIRSF PIRSF001174 1 775 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YPO3155 f89865f9bec855ee7200119bdb887e77 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 4.5E-44 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 YPO3155 f89865f9bec855ee7200119bdb887e77 784 SMART SM00382 348 492 6.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3155 f89865f9bec855ee7200119bdb887e77 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.135 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 YPO3155 f89865f9bec855ee7200119bdb887e77 784 SUPERFAMILY SSF54211 595 770 1.48E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3155 f89865f9bec855ee7200119bdb887e77 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 9.0E-96 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 YPO0880 330d07b71ace618610dc8003c8d315b9 763 Gene3D G3DSA:3.90.580.10 31 96 7.3E-7 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YPO0880 330d07b71ace618610dc8003c8d315b9 763 Gene3D G3DSA:1.10.10.10 652 749 4.9E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0880 330d07b71ace618610dc8003c8d315b9 763 Gene3D G3DSA:3.40.50.300 441 620 1.7E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0880 330d07b71ace618610dc8003c8d315b9 763 SMART SM00885 318 444 1.3E-19 T 22-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YPO0880 330d07b71ace618610dc8003c8d315b9 763 Pfam PF08706 D5 N terminal like 373 447 2.8E-7 T 22-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YPO0880 330d07b71ace618610dc8003c8d315b9 763 Pfam PF08273 Zinc-binding domain of primase-helicase 30 67 1.3E-17 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- YPO0880 330d07b71ace618610dc8003c8d315b9 763 SMART SM00778 29 67 1.6E-19 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- YPO0880 330d07b71ace618610dc8003c8d315b9 763 SUPERFAMILY SSF52540 412 616 1.86E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0880 330d07b71ace618610dc8003c8d315b9 763 SUPERFAMILY SSF46785 652 750 1.96E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0880 330d07b71ace618610dc8003c8d315b9 763 Pfam PF13362 Toprim domain 181 279 4.7E-11 T 22-04-2016 IPR006171 Toprim domain YPO0880 330d07b71ace618610dc8003c8d315b9 763 SUPERFAMILY SSF57783 28 94 5.1E-10 T 22-04-2016 YPO0880 330d07b71ace618610dc8003c8d315b9 763 Pfam PF03288 Poxvirus D5 protein-like 651 748 1.3E-19 T 22-04-2016 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal YPO1398 80047d184959eaa2daaf9939cf3fc927 69 PIRSF PIRSF002599 1 69 3.5E-18 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPO1398 80047d184959eaa2daaf9939cf3fc927 69 Gene3D G3DSA:2.40.50.140 5 67 9.8E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1398 80047d184959eaa2daaf9939cf3fc927 69 SUPERFAMILY SSF50249 3 67 1.84E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1398 80047d184959eaa2daaf9939cf3fc927 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 3.1E-20 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1398 80047d184959eaa2daaf9939cf3fc927 69 PANTHER PTHR11544 1 68 2.6E-15 T 22-04-2016 YPO1398 80047d184959eaa2daaf9939cf3fc927 69 SMART SM00357 5 69 1.1E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO1398 80047d184959eaa2daaf9939cf3fc927 69 PRINTS PR00050 Cold shock protein signature 6 21 4.9E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1398 80047d184959eaa2daaf9939cf3fc927 69 PRINTS PR00050 Cold shock protein signature 27 36 4.9E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1398 80047d184959eaa2daaf9939cf3fc927 69 PRINTS PR00050 Cold shock protein signature 42 60 4.9E-12 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1398 80047d184959eaa2daaf9939cf3fc927 69 PANTHER PTHR11544:SF65 1 68 2.6E-15 T 22-04-2016 YPO2389 c3293d1fbfa2c49b24aa02f189d494d5 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 383 4.7E-110 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 YPO2389 c3293d1fbfa2c49b24aa02f189d494d5 400 SUPERFAMILY SSF103473 7 392 1.83E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2389 c3293d1fbfa2c49b24aa02f189d494d5 400 PANTHER PTHR23502 1 388 7.5E-218 T 22-04-2016 YPO2389 c3293d1fbfa2c49b24aa02f189d494d5 400 PANTHER PTHR23502:SF28 1 388 7.5E-218 T 22-04-2016 YPO2389 c3293d1fbfa2c49b24aa02f189d494d5 400 Pfam PF07690 Major Facilitator Superfamily 14 344 5.2E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO2389 c3293d1fbfa2c49b24aa02f189d494d5 400 Gene3D G3DSA:1.20.1250.20 203 392 2.5E-10 T 22-04-2016 YPO2389 c3293d1fbfa2c49b24aa02f189d494d5 400 Gene3D G3DSA:1.20.1250.20 10 192 6.4E-30 T 22-04-2016 YPO1746 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1746 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1746 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1746 2455053a6906736a69ca40bce64bc56b 69 Gene3D G3DSA:2.40.50.140 4 67 1.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1746 2455053a6906736a69ca40bce64bc56b 69 SUPERFAMILY SSF50249 3 68 2.06E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1746 2455053a6906736a69ca40bce64bc56b 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.7E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1746 2455053a6906736a69ca40bce64bc56b 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site YPO1746 2455053a6906736a69ca40bce64bc56b 69 PANTHER PTHR11544:SF53 1 69 1.3E-48 T 22-04-2016 YPO1746 2455053a6906736a69ca40bce64bc56b 69 SMART SM00357 5 69 8.3E-32 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO1746 2455053a6906736a69ca40bce64bc56b 69 PIRSF PIRSF002599 1 69 5.3E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPO1746 2455053a6906736a69ca40bce64bc56b 69 PANTHER PTHR11544 1 69 1.3E-48 T 22-04-2016 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 148 2.4E-24 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 PANTHER PTHR23133:SF2 10 97 5.5E-185 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 PANTHER PTHR23133:SF2 163 355 5.5E-185 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 57.075 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 Pfam PF13242 HAD-hyrolase-like 103 146 5.3E-5 T 22-04-2016 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 SUPERFAMILY SSF54211 167 251 5.31E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 Gene3D G3DSA:3.30.230.40 258 355 2.6E-31 T 22-04-2016 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 PANTHER PTHR23133 10 97 5.5E-185 T 22-04-2016 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 PANTHER PTHR23133 163 355 5.5E-185 T 22-04-2016 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 SUPERFAMILY SSF54211 252 342 2.28E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 SUPERFAMILY SSF56784 1 157 6.89E-37 T 22-04-2016 IPR023214 HAD-like domain YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 Gene3D G3DSA:3.30.230.40 167 253 7.9E-37 T 22-04-2016 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 36.127 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 Gene3D G3DSA:3.40.50.1000 1 160 5.7E-40 T 22-04-2016 IPR023214 HAD-like domain YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.1E-63 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 3.5E-44 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 YPO1546 83aa18e67f920eb4232b0a0f46738e82 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 9.5E-77 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 YPO3154 0c91d7bdf91020d7d178a60d53c866bf 90 SMART SM00411 1 90 2.5E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO3154 0c91d7bdf91020d7d178a60d53c866bf 90 SUPERFAMILY SSF47729 1 90 9.13E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPO3154 0c91d7bdf91020d7d178a60d53c866bf 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO3154 0c91d7bdf91020d7d178a60d53c866bf 90 Gene3D G3DSA:4.10.520.10 1 90 2.1E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPO3154 0c91d7bdf91020d7d178a60d53c866bf 90 PANTHER PTHR33175 1 90 2.4E-44 T 22-04-2016 YPO3154 0c91d7bdf91020d7d178a60d53c866bf 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YPO3154 0c91d7bdf91020d7d178a60d53c866bf 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO3154 0c91d7bdf91020d7d178a60d53c866bf 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO3154 0c91d7bdf91020d7d178a60d53c866bf 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 364 1.1E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 25 74 0.0029 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 653 671 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 863 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PANTHER PTHR11638 548 884 0.0 T 22-04-2016 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 324 336 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 791 869 7.4E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 SUPERFAMILY SSF81923 15 123 1.96E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 668 686 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 730 744 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 623 641 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 697 715 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 SUPERFAMILY SSF52540 568 860 3.09E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 Gene3D G3DSA:3.40.50.300 191 372 1.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 Gene3D G3DSA:1.10.8.60 801 883 4.0E-13 T 22-04-2016 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 Gene3D G3DSA:1.10.1780.10 11 125 3.5E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 SMART SM01086 791 882 2.0E-14 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 SUPERFAMILY SSF52540 190 535 4.63E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 Pfam PF07724 AAA domain (Cdc48 subfamily) 619 785 7.7E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 SMART SM00382 228 369 2.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 SMART SM00382 619 770 2.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 Gene3D G3DSA:3.40.50.300 573 800 1.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PANTHER PTHR11638 1 145 0.0 T 22-04-2016 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PANTHER PTHR11638 173 527 0.0 T 22-04-2016 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PANTHER PTHR11638:SF122 1 145 0.0 T 22-04-2016 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PANTHER PTHR11638:SF122 173 527 0.0 T 22-04-2016 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 PANTHER PTHR11638:SF122 548 884 0.0 T 22-04-2016 YPO2946 6b5169d89072c460a29ef5b3f8a59e58 891 Gene3D G3DSA:1.10.8.60 374 455 1.2E-28 T 22-04-2016 YPO1184 a82df7394a7843ef570cabb05b835c72 266 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 5 262 2.3E-83 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 YPO1184 a82df7394a7843ef570cabb05b835c72 266 PANTHER PTHR30043 60 266 3.6E-105 T 22-04-2016 YPO1184 a82df7394a7843ef570cabb05b835c72 266 PANTHER PTHR30043 1 42 3.6E-105 T 22-04-2016 YPO1184 a82df7394a7843ef570cabb05b835c72 266 Gene3D G3DSA:1.10.3720.10 69 262 2.3E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1184 a82df7394a7843ef570cabb05b835c72 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 251 1.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1184 a82df7394a7843ef570cabb05b835c72 266 SUPERFAMILY SSF161098 68 254 3.14E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1184 a82df7394a7843ef570cabb05b835c72 266 PANTHER PTHR30043:SF1 60 266 3.6E-105 T 22-04-2016 YPO1184 a82df7394a7843ef570cabb05b835c72 266 PANTHER PTHR30043:SF1 1 42 3.6E-105 T 22-04-2016 YPO0835 35aba4e7588578febe16caa8a0f2949b 262 PANTHER PTHR32502:SF8 2 262 1.8E-135 T 22-04-2016 YPO0835 35aba4e7588578febe16caa8a0f2949b 262 PANTHER PTHR32502 2 262 1.8E-135 T 22-04-2016 YPO0835 35aba4e7588578febe16caa8a0f2949b 262 Pfam PF03609 PTS system sorbose-specific iic component 3 233 6.8E-69 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 42.116 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 PANTHER PTHR23402:SF1 1 214 1.4E-74 T 22-04-2016 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 Gene3D G3DSA:3.40.630.20 2 210 3.1E-70 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 5.1E-48 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 4.9E-83 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 214 1.1E-89 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 SUPERFAMILY SSF53182 1 214 1.57E-76 T 22-04-2016 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 PIRSF PIRSF015592 1 213 7.6E-90 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YPO2703 11bfb9b211ffe1da490d9e92bcd15652 215 PANTHER PTHR23402 1 214 1.4E-74 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPO3488 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF00270 DEAD/DEAH box helicase 32 196 1.4E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO3488 975c2c37a0e563c78469f3b6ec907661 664 SMART SM00490 261 342 1.5E-31 T 22-04-2016 IPR001650 Helicase, C-terminal YPO3488 975c2c37a0e563c78469f3b6ec907661 664 PANTHER PTHR24031:SF261 7 463 1.7E-279 T 22-04-2016 YPO3488 975c2c37a0e563c78469f3b6ec907661 664 PANTHER PTHR24031:SF261 546 663 1.7E-279 T 22-04-2016 YPO3488 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF03880 DbpA RNA binding domain 503 572 1.7E-19 T 22-04-2016 IPR005580 DbpA, RNA-binding domain YPO3488 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF00271 Helicase conserved C-terminal domain 234 342 1.6E-28 T 22-04-2016 IPR001650 Helicase, C-terminal YPO3488 975c2c37a0e563c78469f3b6ec907661 664 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 574 46.61 T 22-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 YPO3488 975c2c37a0e563c78469f3b6ec907661 664 Gene3D G3DSA:3.40.50.300 6 208 8.6E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3488 975c2c37a0e563c78469f3b6ec907661 664 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPO3488 975c2c37a0e563c78469f3b6ec907661 664 PANTHER PTHR24031 7 463 1.7E-279 T 22-04-2016 YPO3488 975c2c37a0e563c78469f3b6ec907661 664 PANTHER PTHR24031 546 663 1.7E-279 T 22-04-2016 YPO3488 975c2c37a0e563c78469f3b6ec907661 664 Pfam PF12343 Cold shock protein DEAD box A 591 664 1.2E-22 T 22-04-2016 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 YPO3488 975c2c37a0e563c78469f3b6ec907661 664 SUPERFAMILY SSF52540 148 356 2.34E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3488 975c2c37a0e563c78469f3b6ec907661 664 SMART SM00487 26 224 3.2E-64 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO3488 975c2c37a0e563c78469f3b6ec907661 664 Gene3D G3DSA:3.40.50.300 209 376 1.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3488 975c2c37a0e563c78469f3b6ec907661 664 SUPERFAMILY SSF52540 5 210 2.48E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0956 33933e7cf1e5aab98765ecd75d678cb8 699 Gene3D G3DSA:2.170.130.10 36 161 7.7E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO0956 33933e7cf1e5aab98765ecd75d678cb8 699 Gene3D G3DSA:2.40.170.20 169 699 1.6E-142 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO0956 33933e7cf1e5aab98765ecd75d678cb8 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 699 8.2E-106 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPO0956 33933e7cf1e5aab98765ecd75d678cb8 699 Pfam PF00593 TonB dependent receptor 461 694 2.6E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO0956 33933e7cf1e5aab98765ecd75d678cb8 699 PANTHER PTHR32552 29 699 0.0 T 22-04-2016 YPO0956 33933e7cf1e5aab98765ecd75d678cb8 699 SUPERFAMILY SSF56935 44 699 9.38E-126 T 22-04-2016 YPO0956 33933e7cf1e5aab98765ecd75d678cb8 699 PANTHER PTHR32552:SF6 29 699 0.0 T 22-04-2016 YPO0956 33933e7cf1e5aab98765ecd75d678cb8 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 153 8.1E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO2602 383c247f34415e2eb90830ed90e0a802 360 Pfam PF05036 Sporulation related domain 286 357 1.4E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO2602 383c247f34415e2eb90830ed90e0a802 360 SUPERFAMILY SSF50685 75 164 4.19E-9 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPO2602 383c247f34415e2eb90830ed90e0a802 360 PANTHER PTHR34183 282 360 6.5E-127 T 22-04-2016 YPO2602 383c247f34415e2eb90830ed90e0a802 360 PANTHER PTHR34183 32 228 6.5E-127 T 22-04-2016 YPO2602 383c247f34415e2eb90830ed90e0a802 360 SUPERFAMILY SSF110997 286 357 4.58E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO2602 383c247f34415e2eb90830ed90e0a802 360 Gene3D G3DSA:3.30.70.1070 286 357 1.9E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO2602 383c247f34415e2eb90830ed90e0a802 360 Gene3D G3DSA:2.40.40.10 116 167 3.3E-4 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPO2602 383c247f34415e2eb90830ed90e0a802 360 PANTHER PTHR34183:SF1 282 360 6.5E-127 T 22-04-2016 YPO2602 383c247f34415e2eb90830ed90e0a802 360 PANTHER PTHR34183:SF1 32 228 6.5E-127 T 22-04-2016 YPO2602 383c247f34415e2eb90830ed90e0a802 360 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 78 177 6.4E-35 T 22-04-2016 IPR012997 Rare lipoprotein A YPO2602 383c247f34415e2eb90830ed90e0a802 360 Pfam PF03330 Lytic transglycolase 78 164 1.3E-23 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPO4097 f05b9d36a29d5b13df96e544916a916b 462 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 371 439 1.0E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 Pfam PF11638 DnaA N-terminal domain 4 64 1.4E-19 T 22-04-2016 IPR024633 DnaA N-terminal domain YPO4097 f05b9d36a29d5b13df96e544916a916b 462 PANTHER PTHR30050 125 462 9.5E-252 T 22-04-2016 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 PANTHER PTHR30050 1 98 9.5E-252 T 22-04-2016 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 SUPERFAMILY SSF52540 127 338 7.92E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4097 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 258 285 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPO4097 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 192 206 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPO4097 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 420 439 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPO4097 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 224 238 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPO4097 f05b9d36a29d5b13df96e544916a916b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 160 180 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPO4097 f05b9d36a29d5b13df96e544916a916b 462 Pfam PF00308 Bacterial dnaA protein 128 344 5.6E-99 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA YPO4097 f05b9d36a29d5b13df96e544916a916b 462 SMART SM00760 370 439 6.1E-45 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:3.40.50.300 116 291 5.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4097 f05b9d36a29d5b13df96e544916a916b 462 PANTHER PTHR30050:SF2 125 462 9.5E-252 T 22-04-2016 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 PANTHER PTHR30050:SF2 1 98 9.5E-252 T 22-04-2016 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:1.10.1750.10 361 461 7.2E-43 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 460 1.9E-186 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 Gene3D G3DSA:1.10.8.60 293 360 5.5E-30 T 22-04-2016 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 SUPERFAMILY SSF48295 358 461 3.4E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 461 34.412 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YPO4097 f05b9d36a29d5b13df96e544916a916b 462 SMART SM00382 159 361 6.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO4097 f05b9d36a29d5b13df96e544916a916b 462 ProSitePatterns PS01008 DnaA protein signature. 420 439 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 PANTHER PTHR30181 2 377 1.9E-192 T 22-04-2016 YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 PRINTS PR00107 Phosphocarrier protein signature 325 340 8.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 PRINTS PR00107 Phosphocarrier protein signature 297 313 8.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 PRINTS PR00107 Phosphocarrier protein signature 340 357 8.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 Pfam PF00381 PTS HPr component phosphorylation site 287 369 2.2E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 3.2E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 Gene3D G3DSA:3.40.930.10 4 141 2.8E-39 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 Gene3D G3DSA:3.40.930.10 150 278 1.0E-9 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 SUPERFAMILY SSF55804 148 276 2.27E-14 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 1.3E-29 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 PANTHER PTHR30181:SF3 2 377 1.9E-192 T 22-04-2016 YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 SUPERFAMILY SSF55804 2 140 5.36E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 Gene3D G3DSA:3.30.1340.10 287 374 1.7E-29 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 SUPERFAMILY SSF55594 286 374 3.93E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO1298 0b5cadbbbd9b1351177a503137a998cb 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO3262 92ae38458b8dcf3e37aaf80d3369ac73 155 Gene3D G3DSA:3.10.450.50 33 154 2.8E-61 T 22-04-2016 IPR032710 NTF2-like domain YPO3262 92ae38458b8dcf3e37aaf80d3369ac73 155 Pfam PF11533 Protein of unknown function (DUF3225) 32 154 1.2E-61 T 22-04-2016 IPR024507 Protein of unknown function DUF3225 YPO3262 92ae38458b8dcf3e37aaf80d3369ac73 155 SUPERFAMILY SSF54427 31 153 4.5E-40 T 22-04-2016 IPR032710 NTF2-like domain YPO3691 529104ba77f8c1a00b255a32b7a43f59 182 Gene3D G3DSA:1.10.60.30 112 181 2.5E-31 T 22-04-2016 IPR023153 PSPTO4464-like domain YPO3691 529104ba77f8c1a00b255a32b7a43f59 182 Pfam PF04751 Protein of unknown function (DUF615) 25 175 1.1E-56 T 22-04-2016 IPR006839 Ribosome-associated, YjgA YPO3691 529104ba77f8c1a00b255a32b7a43f59 182 PANTHER PTHR38101 4 182 3.2E-90 T 22-04-2016 YPO3691 529104ba77f8c1a00b255a32b7a43f59 182 Gene3D G3DSA:1.10.60.30 35 109 4.7E-31 T 22-04-2016 IPR023153 PSPTO4464-like domain YPO3691 529104ba77f8c1a00b255a32b7a43f59 182 SUPERFAMILY SSF158710 36 179 1.44E-52 T 22-04-2016 YPO3691 529104ba77f8c1a00b255a32b7a43f59 182 PIRSF PIRSF016183 9 182 3.2E-73 T 22-04-2016 IPR006839 Ribosome-associated, YjgA YPO3691 529104ba77f8c1a00b255a32b7a43f59 182 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 15 179 24.021 T 22-04-2016 IPR006839 Ribosome-associated, YjgA YPO3691 529104ba77f8c1a00b255a32b7a43f59 182 PANTHER PTHR38101:SF1 4 182 3.2E-90 T 22-04-2016 YPO0681 e6465be51941e8a0b2e2fd71386a75d4 403 SUPERFAMILY SSF53383 28 398 1.21E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO0681 e6465be51941e8a0b2e2fd71386a75d4 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 207 221 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPO0681 e6465be51941e8a0b2e2fd71386a75d4 403 Gene3D G3DSA:3.40.640.10 11 263 2.2E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0681 e6465be51941e8a0b2e2fd71386a75d4 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 13 399 9.9E-168 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 YPO0681 e6465be51941e8a0b2e2fd71386a75d4 403 PIRSF PIRSF001434 2 400 4.9E-114 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPO0681 e6465be51941e8a0b2e2fd71386a75d4 403 PANTHER PTHR11808 4 401 1.3E-282 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPO0681 e6465be51941e8a0b2e2fd71386a75d4 403 Gene3D G3DSA:3.90.1150.10 264 399 6.1E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO0681 e6465be51941e8a0b2e2fd71386a75d4 403 PANTHER PTHR11808:SF45 4 401 1.3E-282 T 22-04-2016 YPO0681 e6465be51941e8a0b2e2fd71386a75d4 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 397 8.9E-111 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPO3538 0f49e6ba185b34b9493e5ef78b90b2d4 106 PIRSF PIRSF003135 1 103 2.7E-51 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YPO3538 0f49e6ba185b34b9493e5ef78b90b2d4 106 Gene3D G3DSA:2.40.50.140 3 105 1.8E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3538 0f49e6ba185b34b9493e5ef78b90b2d4 106 Pfam PF00436 Single-strand binding protein family 5 88 9.0E-14 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 YPO3538 0f49e6ba185b34b9493e5ef78b90b2d4 106 SUPERFAMILY SSF50249 3 105 4.46E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3538 0f49e6ba185b34b9493e5ef78b90b2d4 106 Hamap MF_00720 Primosomal replication protein n [priB]. 3 102 30.27 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YPO3538 0f49e6ba185b34b9493e5ef78b90b2d4 106 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 5 102 1.0E-37 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YPO2635 5834de8a9663be676c78792af08f6c8c 175 PIRSF PIRSF038996 1 172 2.5E-71 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YPO2635 5834de8a9663be676c78792af08f6c8c 175 Gene3D G3DSA:3.40.50.360 1 168 7.4E-64 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO2635 5834de8a9663be676c78792af08f6c8c 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YPO2635 5834de8a9663be676c78792af08f6c8c 175 SUPERFAMILY SSF52218 4 170 4.6E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO2635 5834de8a9663be676c78792af08f6c8c 175 PANTHER PTHR19384 141 175 3.5E-115 T 22-04-2016 YPO2635 5834de8a9663be676c78792af08f6c8c 175 PANTHER PTHR19384 1 120 3.5E-115 T 22-04-2016 YPO2635 5834de8a9663be676c78792af08f6c8c 175 PANTHER PTHR19384:SF77 141 175 3.5E-115 T 22-04-2016 YPO2635 5834de8a9663be676c78792af08f6c8c 175 PANTHER PTHR19384:SF77 1 120 3.5E-115 T 22-04-2016 YPO2635 5834de8a9663be676c78792af08f6c8c 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 5.7E-77 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YPO2635 5834de8a9663be676c78792af08f6c8c 175 Pfam PF00258 Flavodoxin 6 160 4.7E-33 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPO1149 ebf52ca2ce5da50b22947b09da8b0aef 334 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 58.26 T 22-04-2016 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 YPO1149 ebf52ca2ce5da50b22947b09da8b0aef 334 PANTHER PTHR30344 6 334 4.1E-106 T 22-04-2016 YPO1149 ebf52ca2ce5da50b22947b09da8b0aef 334 PANTHER PTHR30344:SF1 6 334 4.1E-106 T 22-04-2016 YPO1149 ebf52ca2ce5da50b22947b09da8b0aef 334 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 8.8E-94 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 YPO1149 ebf52ca2ce5da50b22947b09da8b0aef 334 SUPERFAMILY SSF50974 5 291 3.01E-54 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal YPO1149 ebf52ca2ce5da50b22947b09da8b0aef 334 Gene3D G3DSA:2.130.10.10 2 327 1.6E-85 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPO0066 5bc3aad8df72deac04cf0c261d1a961f 82 Pfam PF00462 Glutaredoxin 4 63 4.9E-25 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPO0066 5bc3aad8df72deac04cf0c261d1a961f 82 PANTHER PTHR10168 3 82 1.9E-31 T 22-04-2016 YPO0066 5bc3aad8df72deac04cf0c261d1a961f 82 Gene3D G3DSA:3.40.30.10 1 73 1.7E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0066 5bc3aad8df72deac04cf0c261d1a961f 82 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 YPO0066 5bc3aad8df72deac04cf0c261d1a961f 82 PRINTS PR00160 Glutaredoxin signature 60 73 2.5E-17 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPO0066 5bc3aad8df72deac04cf0c261d1a961f 82 PRINTS PR00160 Glutaredoxin signature 46 59 2.5E-17 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPO0066 5bc3aad8df72deac04cf0c261d1a961f 82 PRINTS PR00160 Glutaredoxin signature 4 22 2.5E-17 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPO0066 5bc3aad8df72deac04cf0c261d1a961f 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 7.3E-37 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 YPO0066 5bc3aad8df72deac04cf0c261d1a961f 82 SUPERFAMILY SSF52833 1 82 1.14E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3530 ded116479bf6731d07281efd95b0ad10 656 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 558 7.7E-24 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 Gene3D G3DSA:3.60.21.10 27 361 4.1E-94 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO3530 ded116479bf6731d07281efd95b0ad10 656 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 30 655 0.0 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 YPO3530 ded116479bf6731d07281efd95b0ad10 656 PRINTS PR01607 Apyrase family signature 291 311 1.4E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 PRINTS PR01607 Apyrase family signature 538 557 1.4E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 PRINTS PR01607 Apyrase family signature 251 274 1.4E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 PRINTS PR01607 Apyrase family signature 436 459 1.4E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 PRINTS PR01607 Apyrase family signature 223 240 1.4E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 PRINTS PR01607 Apyrase family signature 30 48 1.4E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 ProSitePatterns PS00785 5'-nucleotidase signature 1. 32 44 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 YPO3530 ded116479bf6731d07281efd95b0ad10 656 ProSitePatterns PS00786 5'-nucleotidase signature 2. 117 128 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 YPO3530 ded116479bf6731d07281efd95b0ad10 656 PANTHER PTHR11575:SF6 1 653 0.0 T 22-04-2016 YPO3530 ded116479bf6731d07281efd95b0ad10 656 Pfam PF00149 Calcineurin-like phosphoesterase 32 267 4.0E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 SUPERFAMILY SSF55816 363 603 1.57E-37 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 Gene3D G3DSA:3.90.780.10 363 603 1.0E-44 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 PANTHER PTHR11575 1 653 0.0 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YPO3530 ded116479bf6731d07281efd95b0ad10 656 SUPERFAMILY SSF56300 27 361 8.02E-85 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 Gene3D G3DSA:3.30.1360.70 2 104 2.4E-33 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.5E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 Pfam PF00750 tRNA synthetases class I (R) 102 446 2.5E-166 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 SMART SM00836 460 576 7.9E-37 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 SUPERFAMILY SSF47323 454 576 2.94E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 SMART SM01016 5 87 8.0E-28 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 SUPERFAMILY SSF55190 2 96 7.98E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.58 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 Gene3D G3DSA:1.10.730.10 454 576 3.3E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 PANTHER PTHR11956:SF1 1 576 8.3E-272 T 22-04-2016 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 PANTHER PTHR11956 1 576 8.3E-272 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 Gene3D G3DSA:3.40.50.620 110 451 9.0E-115 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 1.2E-203 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 SUPERFAMILY SSF52374 109 454 1.48E-94 T 22-04-2016 YPO2046 4d60d9ff956fea8111b1d278cf6fe334 576 Pfam PF05746 DALR anticodon binding domain 460 576 7.0E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YPO2078 2c23978e623e648918887d5d65a0a12d 228 SUPERFAMILY SSF63848 122 227 5.36E-32 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 YPO2078 2c23978e623e648918887d5d65a0a12d 228 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 124 224 4.0E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 YPO2078 2c23978e623e648918887d5d65a0a12d 228 PANTHER PTHR34108:SF1 3 228 2.4E-81 T 22-04-2016 YPO2078 2c23978e623e648918887d5d65a0a12d 228 Gene3D G3DSA:2.160.20.70 115 227 7.4E-39 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 YPO2078 2c23978e623e648918887d5d65a0a12d 228 PANTHER PTHR34108 3 228 2.4E-81 T 22-04-2016 YPO2078 2c23978e623e648918887d5d65a0a12d 228 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 3.2E-34 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 YPO2078 2c23978e623e648918887d5d65a0a12d 228 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 227 1.9E-71 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 YPO2078 2c23978e623e648918887d5d65a0a12d 228 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 228 29.01 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 YPO3993 60dd69ce380c6f376eb902e24754dab5 159 Pfam PF00754 F5/8 type C domain 27 145 5.7E-18 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain YPO3993 60dd69ce380c6f376eb902e24754dab5 159 Gene3D G3DSA:2.60.120.260 26 147 5.6E-21 T 22-04-2016 IPR008979 Galactose-binding domain-like YPO3993 60dd69ce380c6f376eb902e24754dab5 159 SUPERFAMILY SSF49785 22 147 6.66E-22 T 22-04-2016 IPR008979 Galactose-binding domain-like YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 4.8E-29 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.8E-29 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 4.8E-29 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 4.8E-29 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.8E-29 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 SUPERFAMILY SSF51905 1 365 1.27E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3977 e019164b7879d861bdace67dba8a7c40 450 Gene3D G3DSA:3.30.390.30 338 450 1.6E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PANTHER PTHR22912 1 450 2.8E-258 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.7E-34 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO3977 e019164b7879d861bdace67dba8a7c40 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 3.4E-69 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PIRSF PIRSF000350 1 447 1.2E-85 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.7E-66 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.7E-66 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.7E-66 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.7E-66 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.7E-66 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.7E-66 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.7E-66 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.7E-66 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.7E-66 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 4.9E-218 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 YPO3977 e019164b7879d861bdace67dba8a7c40 450 SUPERFAMILY SSF55424 336 450 4.98E-36 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPO3977 e019164b7879d861bdace67dba8a7c40 450 Gene3D G3DSA:3.50.50.60 156 247 5.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3977 e019164b7879d861bdace67dba8a7c40 450 PANTHER PTHR22912:SF106 1 450 2.8E-258 T 22-04-2016 YPO3977 e019164b7879d861bdace67dba8a7c40 450 Gene3D G3DSA:3.50.50.60 248 333 1.4E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3977 e019164b7879d861bdace67dba8a7c40 450 Gene3D G3DSA:3.50.50.60 2 155 3.6E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PANTHER PTHR32063 9 1052 0.0 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 Gene3D G3DSA:3.30.70.1430 49 150 1.6E-29 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 Gene3D G3DSA:3.30.2090.10 720 804 1.8E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 SUPERFAMILY SSF82714 192 275 3.27E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 SUPERFAMILY SSF82866 299 498 3.14E-46 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.1E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 PANTHER PTHR32063:SF21 9 1052 0.0 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 SUPERFAMILY SSF82714 719 802 1.31E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 SUPERFAMILY SSF82693 146 191 1.1E-19 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 SUPERFAMILY SSF82693 277 333 1.1E-19 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 SUPERFAMILY SSF82693 49 142 4.71E-23 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 Gene3D G3DSA:3.30.2090.10 192 275 2.3E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 SUPERFAMILY SSF82693 565 662 1.92E-16 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 Gene3D G3DSA:3.30.70.1430 568 656 2.1E-11 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 34.887 T 22-04-2016 IPR022831 Multidrug resistance protein MdtB YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 SUPERFAMILY SSF82866 799 1025 9.55E-47 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 Gene3D G3DSA:1.10.3850.10 807 1024 1.1E-56 T 22-04-2016 YPO2848 afef9c4f1ac62d2db1407c7a3bf4616a 1052 Gene3D G3DSA:1.20.1640.10 294 508 3.6E-55 T 22-04-2016 YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 PANTHER PTHR22683 449 1302 0.0 T 22-04-2016 YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 PANTHER PTHR22683 1 313 0.0 T 22-04-2016 YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 SUPERFAMILY SSF46785 1238 1303 2.18E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 Gene3D G3DSA:3.40.50.300 897 1203 3.8E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 PANTHER PTHR22683:SF41 449 1302 0.0 T 22-04-2016 YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 PANTHER PTHR22683:SF41 1 313 0.0 T 22-04-2016 YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 Pfam PF09397 Ftsk gamma domain 1240 1300 9.5E-27 T 22-04-2016 IPR018541 FtsK gamma domain YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 1.1E-43 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 Pfam PF01580 FtsK/SpoIIIE family 923 1136 4.4E-72 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 SUPERFAMILY SSF52540 897 1209 7.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 SUPERFAMILY SSF81995 693 805 9.68E-5 T 22-04-2016 YPO1376 d444a19cbcca340b3b902378c4d1a7b0 1305 SMART SM00843 1238 1303 1.1E-40 T 22-04-2016 IPR018541 FtsK gamma domain YPO3858 8088c59ececc26aefb64a50206ee2581 418 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 2.6E-10 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 YPO3858 8088c59ececc26aefb64a50206ee2581 418 PANTHER PTHR30250 3 416 2.4E-185 T 22-04-2016 YPO3858 8088c59ececc26aefb64a50206ee2581 418 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.478 T 22-04-2016 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 UniPathway: UPA00566 YPO3858 8088c59ececc26aefb64a50206ee2581 418 PANTHER PTHR30250:SF9 3 416 2.4E-185 T 22-04-2016 YPO0251 2aaebfcb2fdc766e819efd2491f21fe0 551 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 2 551 50.966 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 YPO0251 2aaebfcb2fdc766e819efd2491f21fe0 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 468 2.7E-63 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO0251 2aaebfcb2fdc766e819efd2491f21fe0 551 Pfam PF00474 Sodium:solute symporter family 64 470 3.7E-128 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO0251 2aaebfcb2fdc766e819efd2491f21fe0 551 PANTHER PTHR11819:SF13 33 540 3.3E-291 T 22-04-2016 YPO0251 2aaebfcb2fdc766e819efd2491f21fe0 551 PANTHER PTHR11819 33 540 3.3E-291 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO0251 2aaebfcb2fdc766e819efd2491f21fe0 551 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 4 551 0.0 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 YPO0251 2aaebfcb2fdc766e819efd2491f21fe0 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPO1142 a4c675d97592a9554fa440bc9d189bde 496 SUPERFAMILY SSF52540 24 225 1.12E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1142 a4c675d97592a9554fa440bc9d189bde 496 PANTHER PTHR24220 3 384 3.5E-200 T 22-04-2016 YPO1142 a4c675d97592a9554fa440bc9d189bde 496 PANTHER PTHR24220:SF557 3 384 3.5E-200 T 22-04-2016 YPO1142 a4c675d97592a9554fa440bc9d189bde 496 SMART SM00382 28 238 5.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1142 a4c675d97592a9554fa440bc9d189bde 496 SMART SM00382 285 479 3.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1142 a4c675d97592a9554fa440bc9d189bde 496 Pfam PF00005 ABC transporter 276 429 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1142 a4c675d97592a9554fa440bc9d189bde 496 Pfam PF00005 ABC transporter 24 163 4.2E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1142 a4c675d97592a9554fa440bc9d189bde 496 Gene3D G3DSA:3.40.50.300 23 226 1.9E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1142 a4c675d97592a9554fa440bc9d189bde 496 Gene3D G3DSA:3.40.50.300 255 468 7.1E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1142 a4c675d97592a9554fa440bc9d189bde 496 SUPERFAMILY SSF52540 250 481 2.42E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0808 ed7eda57b0c521597009029e3bd31b7a 389 SUPERFAMILY SSF53067 147 230 7.51E-14 T 22-04-2016 YPO0808 ed7eda57b0c521597009029e3bd31b7a 389 Pfam PF12693 GspL periplasmic domain 238 388 3.3E-36 T 22-04-2016 IPR025691 GspL periplasmic domain YPO0808 ed7eda57b0c521597009029e3bd31b7a 389 Pfam PF05134 Type II secretion system (T2SS), protein L 7 231 1.4E-73 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain YPO0808 ed7eda57b0c521597009029e3bd31b7a 389 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 7 389 3.0E-107 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 YPO0808 ed7eda57b0c521597009029e3bd31b7a 389 SUPERFAMILY SSF53067 6 144 5.7E-26 T 22-04-2016 YPO3212 a497bd137dc88c9d3c78850d03b86f54 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 41.975 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 YPO3212 a497bd137dc88c9d3c78850d03b86f54 303 PANTHER PTHR38103 3 303 2.5E-165 T 22-04-2016 YPO3212 a497bd137dc88c9d3c78850d03b86f54 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 3.3E-130 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 YPO3212 a497bd137dc88c9d3c78850d03b86f54 303 PANTHER PTHR38103:SF1 3 303 2.5E-165 T 22-04-2016 YPO3847 9ff4db3bf006af5035a1bd4c0b2aa4f2 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 22-04-2016 IPR020895 Frataxin conserved site YPO3847 9ff4db3bf006af5035a1bd4c0b2aa4f2 106 Gene3D G3DSA:3.30.920.10 1 105 7.6E-35 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPO3847 9ff4db3bf006af5035a1bd4c0b2aa4f2 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.43 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPO3847 9ff4db3bf006af5035a1bd4c0b2aa4f2 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 5.4E-43 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPO3847 9ff4db3bf006af5035a1bd4c0b2aa4f2 106 SMART SM01219 1 106 2.4E-55 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPO3847 9ff4db3bf006af5035a1bd4c0b2aa4f2 106 PANTHER PTHR16821 1 105 5.2E-44 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPO3847 9ff4db3bf006af5035a1bd4c0b2aa4f2 106 Pfam PF01491 Frataxin-like domain 1 102 1.1E-28 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPO3847 9ff4db3bf006af5035a1bd4c0b2aa4f2 106 SUPERFAMILY SSF55387 1 105 1.92E-39 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YPO3523 c6b682b49d5ae2f14db549070b9dae3a 1305 Gene3D G3DSA:2.150.10.10 206 260 9.0E-5 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO3523 c6b682b49d5ae2f14db549070b9dae3a 1305 PANTHER PTHR36985 251 1305 0.0 T 22-04-2016 YPO3523 c6b682b49d5ae2f14db549070b9dae3a 1305 PANTHER PTHR36985 1 215 0.0 T 22-04-2016 YPO3523 c6b682b49d5ae2f14db549070b9dae3a 1305 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 969 1305 7.1E-64 T 22-04-2016 IPR007452 Translocation and assembly module TamB YPO1840 552af40db2a78f5aec0f0d8e4aa6a802 132 Pfam PF02561 Flagellar protein FliS 8 125 2.4E-39 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO1840 552af40db2a78f5aec0f0d8e4aa6a802 132 PIRSF PIRSF039090 1 132 8.2E-42 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO1840 552af40db2a78f5aec0f0d8e4aa6a802 132 Gene3D G3DSA:1.20.120.340 8 130 6.3E-45 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO1840 552af40db2a78f5aec0f0d8e4aa6a802 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 9.3E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO1840 552af40db2a78f5aec0f0d8e4aa6a802 132 SUPERFAMILY SSF101116 8 130 7.46E-41 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO1840 552af40db2a78f5aec0f0d8e4aa6a802 132 PANTHER PTHR34773 1 125 2.1E-49 T 22-04-2016 YPO0960 7ca6109478a83add97dc476438aa055b 720 SUPERFAMILY SSF53383 109 566 1.54E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO0960 7ca6109478a83add97dc476438aa055b 720 Gene3D G3DSA:3.90.100.10 593 719 1.5E-36 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPO0960 7ca6109478a83add97dc476438aa055b 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 9.3E-22 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YPO0960 7ca6109478a83add97dc476438aa055b 720 PIRSF PIRSF009393 2 720 2.5E-292 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YPO0960 7ca6109478a83add97dc476438aa055b 720 Gene3D G3DSA:3.40.640.10 109 419 2.0E-115 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0960 7ca6109478a83add97dc476438aa055b 720 PANTHER PTHR11751:SF425 110 580 1.0E-221 T 22-04-2016 YPO0960 7ca6109478a83add97dc476438aa055b 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YPO0960 7ca6109478a83add97dc476438aa055b 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 22-04-2016 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YPO0960 7ca6109478a83add97dc476438aa055b 720 SUPERFAMILY SSF52172 1 108 2.44E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPO0960 7ca6109478a83add97dc476438aa055b 720 Gene3D G3DSA:3.90.1150.10 421 592 6.4E-70 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO0960 7ca6109478a83add97dc476438aa055b 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 550 8.6E-196 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YPO0960 7ca6109478a83add97dc476438aa055b 720 Gene3D G3DSA:3.40.50.220 1 108 3.7E-33 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YPO0960 7ca6109478a83add97dc476438aa055b 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 2.0E-48 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPO0960 7ca6109478a83add97dc476438aa055b 720 PANTHER PTHR11751 110 580 1.0E-221 T 22-04-2016 YPO0960 7ca6109478a83add97dc476438aa055b 720 SUPERFAMILY SSF55904 571 719 9.68E-47 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPO3560 1a419096c1a4c706086f70a326962ff3 171 Gene3D G3DSA:2.30.30.220 3 111 2.3E-52 T 22-04-2016 IPR007481 Stringent starvation protein B YPO3560 1a419096c1a4c706086f70a326962ff3 171 Pfam PF04386 Stringent starvation protein B 9 171 1.3E-43 T 22-04-2016 IPR007481 Stringent starvation protein B YPO3560 1a419096c1a4c706086f70a326962ff3 171 PANTHER PTHR37486:SF1 2 171 2.0E-90 T 22-04-2016 YPO3560 1a419096c1a4c706086f70a326962ff3 171 SUPERFAMILY SSF101738 3 115 2.35E-48 T 22-04-2016 IPR007481 Stringent starvation protein B YPO3560 1a419096c1a4c706086f70a326962ff3 171 PANTHER PTHR37486 2 171 2.0E-90 T 22-04-2016 YPO3560 1a419096c1a4c706086f70a326962ff3 171 PIRSF PIRSF005276 3 171 3.6E-63 T 22-04-2016 IPR007481 Stringent starvation protein B YPO2550 0789cde518951291b84620b07bb779e3 914 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 SUPERFAMILY SSF54862 81 213 5.44E-34 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 SMART SM00926 221 275 1.9E-9 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 7.8E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 SUPERFAMILY SSF53706 219 693 2.2E-78 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 Pfam PF01568 Molydopterin dinucleotide binding domain 830 896 1.1E-7 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 SUPERFAMILY SSF54292 1 77 9.86E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO2550 0789cde518951291b84620b07bb779e3 914 PANTHER PTHR11615 742 913 0.0 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 PANTHER PTHR11615 496 686 0.0 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 PANTHER PTHR11615 364 430 0.0 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 PANTHER PTHR11615 3 320 0.0 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 Gene3D G3DSA:2.40.40.20 821 895 1.5E-11 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 Pfam PF00384 Molybdopterin oxidoreductase 554 637 1.3E-6 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 SUPERFAMILY SSF50692 821 896 7.46E-14 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPO2550 0789cde518951291b84620b07bb779e3 914 Gene3D G3DSA:3.30.70.20 147 157 4.9E-5 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 Gene3D G3DSA:3.30.70.20 198 227 4.9E-5 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 3.1E-11 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 SMART SM00929 88 128 1.9E-19 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 661 1.1E-201 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 Gene3D G3DSA:3.40.50.740 286 340 4.8E-32 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 Gene3D G3DSA:3.40.50.740 504 692 4.8E-32 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 PANTHER PTHR11615:SF134 742 913 0.0 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 PANTHER PTHR11615:SF134 496 686 0.0 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 PANTHER PTHR11615:SF134 364 430 0.0 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 PANTHER PTHR11615:SF134 3 320 0.0 T 22-04-2016 YPO2550 0789cde518951291b84620b07bb779e3 914 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 8.4E-15 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 YPO2550 0789cde518951291b84620b07bb779e3 914 Gene3D G3DSA:3.10.20.30 3 81 4.3E-7 T 22-04-2016 IPR012675 Beta-grasp domain YPO2550 0789cde518951291b84620b07bb779e3 914 Gene3D G3DSA:2.20.25.90 228 274 7.3E-14 T 22-04-2016 YPO1502 9791eecb5585dc641e4070b0ef040502 377 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 370 9.8E-223 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 YPO1502 9791eecb5585dc641e4070b0ef040502 377 SUPERFAMILY SSF50129 1 188 1.67E-71 T 22-04-2016 IPR011032 GroES-like YPO1502 9791eecb5585dc641e4070b0ef040502 377 Gene3D G3DSA:3.40.50.720 191 310 4.4E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1502 9791eecb5585dc641e4070b0ef040502 377 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 YPO1502 9791eecb5585dc641e4070b0ef040502 377 Gene3D G3DSA:3.90.180.10 2 190 3.3E-68 T 22-04-2016 IPR011032 GroES-like YPO1502 9791eecb5585dc641e4070b0ef040502 377 SMART SM00829 11 368 0.0027 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPO1502 9791eecb5585dc641e4070b0ef040502 377 PANTHER PTHR11695:SF560 16 109 3.8E-223 T 22-04-2016 YPO1502 9791eecb5585dc641e4070b0ef040502 377 PANTHER PTHR11695:SF560 129 377 3.8E-223 T 22-04-2016 YPO1502 9791eecb5585dc641e4070b0ef040502 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 127 5.5E-23 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPO1502 9791eecb5585dc641e4070b0ef040502 377 SUPERFAMILY SSF51735 161 335 2.56E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1502 9791eecb5585dc641e4070b0ef040502 377 PANTHER PTHR11695 16 109 3.8E-223 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPO1502 9791eecb5585dc641e4070b0ef040502 377 PANTHER PTHR11695 129 377 3.8E-223 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPO1502 9791eecb5585dc641e4070b0ef040502 377 Pfam PF00107 Zinc-binding dehydrogenase 198 325 4.9E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPO1502 9791eecb5585dc641e4070b0ef040502 377 SUPERFAMILY SSF50129 319 370 3.67E-12 T 22-04-2016 IPR011032 GroES-like YPO3786 c9919d09adb9b297aac7f2dcc329c28b 253 SUPERFAMILY SSF53167 6 250 1.44E-73 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO3786 c9919d09adb9b297aac7f2dcc329c28b 253 Pfam PF01048 Phosphorylase superfamily 21 241 1.4E-38 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO3786 c9919d09adb9b297aac7f2dcc329c28b 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YPO3786 c9919d09adb9b297aac7f2dcc329c28b 253 PANTHER PTHR21234 1 253 1.7E-197 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPO3786 c9919d09adb9b297aac7f2dcc329c28b 253 Gene3D G3DSA:3.40.50.1580 5 252 6.4E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO3786 c9919d09adb9b297aac7f2dcc329c28b 253 PANTHER PTHR21234:SF22 1 253 1.7E-197 T 22-04-2016 YPO3786 c9919d09adb9b297aac7f2dcc329c28b 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 6.7E-128 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 YPO1586 b55fa417400f894776178115b8a3742b 81 Pfam PF06183 DinI-like family 14 78 2.0E-29 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPO1586 b55fa417400f894776178115b8a3742b 81 Gene3D G3DSA:3.30.910.10 1 79 1.1E-33 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPO1586 b55fa417400f894776178115b8a3742b 81 PANTHER PTHR36572 1 81 1.0E-45 T 22-04-2016 YPO1586 b55fa417400f894776178115b8a3742b 81 SUPERFAMILY SSF54857 1 80 1.01E-29 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPO1586 b55fa417400f894776178115b8a3742b 81 PANTHER PTHR36572:SF2 1 81 1.0E-45 T 22-04-2016 YPO3304 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YPO3304 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 PANTHER PTHR34984 1 61 1.3E-33 T 22-04-2016 YPO3304 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 PANTHER PTHR34984:SF1 1 61 1.3E-33 T 22-04-2016 YPO3304 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 59 1.3E-31 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YPO3304 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.462 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YPO3304 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YPO3304 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 22-04-2016 YPO4025 6d9a799f78b0f010de952ea4e8889ea8 252 PANTHER PTHR24220 3 240 5.9E-151 T 22-04-2016 YPO4025 6d9a799f78b0f010de952ea4e8889ea8 252 PANTHER PTHR24220:SF471 3 240 5.9E-151 T 22-04-2016 YPO4025 6d9a799f78b0f010de952ea4e8889ea8 252 Gene3D G3DSA:3.40.50.300 1 226 2.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4025 6d9a799f78b0f010de952ea4e8889ea8 252 Pfam PF00005 ABC transporter 17 164 5.5E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO4025 6d9a799f78b0f010de952ea4e8889ea8 252 SUPERFAMILY SSF52540 1 225 8.26E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4025 6d9a799f78b0f010de952ea4e8889ea8 252 SMART SM00382 26 213 3.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2843 c94fae58dd3439ebce125485ae26edd2 342 Gene3D G3DSA:3.40.190.10 124 282 6.1E-33 T 22-04-2016 YPO2843 c94fae58dd3439ebce125485ae26edd2 342 PANTHER PTHR30222 1 342 3.6E-188 T 22-04-2016 YPO2843 c94fae58dd3439ebce125485ae26edd2 342 SUPERFAMILY SSF53850 21 339 1.28E-60 T 22-04-2016 YPO2843 c94fae58dd3439ebce125485ae26edd2 342 PANTHER PTHR30222:SF2 1 342 3.6E-188 T 22-04-2016 YPO2843 c94fae58dd3439ebce125485ae26edd2 342 Pfam PF13416 Bacterial extracellular solute-binding protein 43 306 3.2E-37 T 22-04-2016 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 SUPERFAMILY SSF69304 155 428 9.15E-58 T 22-04-2016 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 Gene3D G3DSA:2.130.10.10 153 428 1.1E-76 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 427 2.9E-160 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 Gene3D G3DSA:3.40.50.10070 22 152 7.9E-53 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 PANTHER PTHR11731:SF123 160 428 1.6E-137 T 22-04-2016 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 PANTHER PTHR11731:SF123 1 121 1.6E-137 T 22-04-2016 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.9E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller YPO1124 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 377 398 0.017 T 22-04-2016 IPR011659 WD40-like Beta Propeller YPO1124 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 1.9E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller YPO1124 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF07676 WD40-like Beta Propeller Repeat 282 315 9.1E-10 T 22-04-2016 IPR011659 WD40-like Beta Propeller YPO1124 2255c01ecde5a06234959dd5985acf4f 430 Pfam PF04052 TolB amino-terminal domain 23 122 1.4E-32 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 SUPERFAMILY SSF52964 28 161 1.12E-40 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 PANTHER PTHR11731 160 428 1.6E-137 T 22-04-2016 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 PANTHER PTHR11731 1 121 1.6E-137 T 22-04-2016 YPO1124 2255c01ecde5a06234959dd5985acf4f 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.571 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 YPO2933 4e875209bce1b1ea89bb7ae607e2a203 222 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 86 198 2.3E-30 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO2933 4e875209bce1b1ea89bb7ae607e2a203 222 Pfam PF09850 Type VI secretion system protein DotU 86 198 1.1E-25 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO3317 ac242ad0e7ba64e2267deacfc80e372a 205 SUPERFAMILY SSF141318 49 202 1.31E-43 T 22-04-2016 YPO3317 ac242ad0e7ba64e2267deacfc80e372a 205 PIRSF PIRSF033535 1 204 1.0E-83 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YPO3317 ac242ad0e7ba64e2267deacfc80e372a 205 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 13 200 1.2E-35 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YPO0497 808a6acd1a87a26b5436001cb1d24e59 206 Pfam PF00849 RNA pseudouridylate synthase 9 156 1.5E-28 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO0497 808a6acd1a87a26b5436001cb1d24e59 206 PANTHER PTHR11079 3 205 3.1E-77 T 22-04-2016 YPO0497 808a6acd1a87a26b5436001cb1d24e59 206 SUPERFAMILY SSF55120 3 203 6.08E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO0497 808a6acd1a87a26b5436001cb1d24e59 206 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO0497 808a6acd1a87a26b5436001cb1d24e59 206 PANTHER PTHR11079:SF86 3 205 3.1E-77 T 22-04-2016 YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 Pfam PF03472 Autoinducer binding domain 13 157 2.2E-31 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 SUPERFAMILY SSF46894 174 242 2.41E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 SUPERFAMILY SSF75516 13 162 1.16E-35 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 SMART SM00421 179 236 7.1E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 Gene3D G3DSA:1.10.10.10 185 242 1.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 Gene3D G3DSA:3.30.450.80 12 184 8.7E-39 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO0985 c31f12a54fe06305d8e3bacb05cd3a75 247 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 233 3.6E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 SUPERFAMILY SSF51430 1 267 1.09E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 Gene3D G3DSA:3.20.20.100 3 272 6.7E-101 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.7E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.7E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.7E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 PRINTS PR00069 Aldo-keto reductase signature 196 220 1.7E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.7E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 PIRSF PIRSF000097 1 270 1.6E-91 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 PANTHER PTHR11732 3 276 1.1E-132 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPO0676 1c17e5e8d9910a7b6ba615f00c0003a8 277 Pfam PF00248 Aldo/keto reductase family 18 260 7.8E-48 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO3141 8773d750fd6685c60a1824b9d1f6fdf0 286 Gene3D G3DSA:3.10.129.10 5 116 2.8E-50 T 22-04-2016 IPR029069 HotDog domain YPO3141 8773d750fd6685c60a1824b9d1f6fdf0 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 4.9E-102 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 YPO3141 8773d750fd6685c60a1824b9d1f6fdf0 286 Gene3D G3DSA:3.10.129.10 124 285 1.4E-59 T 22-04-2016 IPR029069 HotDog domain YPO3141 8773d750fd6685c60a1824b9d1f6fdf0 286 PANTHER PTHR11066 1 286 6.8E-122 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 YPO3141 8773d750fd6685c60a1824b9d1f6fdf0 286 SUPERFAMILY SSF54637 5 114 3.84E-42 T 22-04-2016 IPR029069 HotDog domain YPO3141 8773d750fd6685c60a1824b9d1f6fdf0 286 Pfam PF13622 Thioesterase-like superfamily 32 282 2.3E-59 T 22-04-2016 YPO3141 8773d750fd6685c60a1824b9d1f6fdf0 286 PANTHER PTHR11066:SF34 1 286 6.8E-122 T 22-04-2016 YPO3141 8773d750fd6685c60a1824b9d1f6fdf0 286 SUPERFAMILY SSF54637 116 283 2.84E-62 T 22-04-2016 IPR029069 HotDog domain YPO0035 ca6abf2bda65793d5d9556735b9307ce 404 PANTHER PTHR36178:SF1 1 402 7.5E-210 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YPO0035 ca6abf2bda65793d5d9556735b9307ce 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 1.1E-190 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YPO0035 ca6abf2bda65793d5d9556735b9307ce 404 PANTHER PTHR36178 1 402 7.5E-210 T 22-04-2016 YPO0035 ca6abf2bda65793d5d9556735b9307ce 404 Pfam PF03616 Sodium/glutamate symporter 2 366 2.6E-160 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YPO3015 bd6b4657198711e60e3dc24f8841f69d 345 Gene3D G3DSA:3.40.190.10 33 175 4.2E-43 T 22-04-2016 YPO3015 bd6b4657198711e60e3dc24f8841f69d 345 Gene3D G3DSA:3.40.190.10 184 308 3.9E-27 T 22-04-2016 YPO3015 bd6b4657198711e60e3dc24f8841f69d 345 PANTHER PTHR30368 16 345 6.4E-265 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YPO3015 bd6b4657198711e60e3dc24f8841f69d 345 SUPERFAMILY SSF53850 32 339 1.41E-78 T 22-04-2016 YPO3015 bd6b4657198711e60e3dc24f8841f69d 345 Pfam PF13531 Bacterial extracellular solute-binding protein 48 293 2.8E-41 T 22-04-2016 YPO3015 bd6b4657198711e60e3dc24f8841f69d 345 PANTHER PTHR30368:SF1 16 345 6.4E-265 T 22-04-2016 YPO3015 bd6b4657198711e60e3dc24f8841f69d 345 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 27 339 8.3E-159 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YPO3920 225fc16990149b3009969432e0ebf3a7 602 Gene3D G3DSA:1.20.1560.10 16 324 9.0E-37 T 22-04-2016 YPO3920 225fc16990149b3009969432e0ebf3a7 602 SUPERFAMILY SSF90123 16 324 5.36E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO3920 225fc16990149b3009969432e0ebf3a7 602 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3920 225fc16990149b3009969432e0ebf3a7 602 Pfam PF00005 ABC transporter 353 500 1.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3920 225fc16990149b3009969432e0ebf3a7 602 PANTHER PTHR24222 16 590 0.0 T 22-04-2016 YPO3920 225fc16990149b3009969432e0ebf3a7 602 PANTHER PTHR24222:SF0 16 590 0.0 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YPO3920 225fc16990149b3009969432e0ebf3a7 602 Gene3D G3DSA:3.40.50.300 346 561 2.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3920 225fc16990149b3009969432e0ebf3a7 602 SMART SM00382 362 548 4.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3920 225fc16990149b3009969432e0ebf3a7 602 Pfam PF00664 ABC transporter transmembrane region 30 287 3.9E-8 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO3920 225fc16990149b3009969432e0ebf3a7 602 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 21 561 6.7E-226 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YPO3920 225fc16990149b3009969432e0ebf3a7 602 SUPERFAMILY SSF52540 326 558 1.65E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 Gene3D G3DSA:1.20.1560.10 12 323 5.7E-73 T 22-04-2016 YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 PANTHER PTHR24221:SF256 1 584 0.0 T 22-04-2016 YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 Gene3D G3DSA:3.40.50.300 341 582 7.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 SUPERFAMILY SSF90123 12 323 5.23E-68 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 SMART SM00382 366 557 4.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 Pfam PF00005 ABC transporter 357 505 1.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 Pfam PF00664 ABC transporter transmembrane region 26 295 4.1E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 SUPERFAMILY SSF52540 335 576 6.4E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3144 b0af91a9ae18144cfd2002dc311bbbac 607 PANTHER PTHR24221 1 584 0.0 T 22-04-2016 YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 7.8E-38 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.173 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 PANTHER PTHR10744 4 82 1.9E-43 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 SUPERFAMILY SSF50249 5 82 2.7E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 Gene3D G3DSA:2.40.50.140 6 82 2.0E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 9.2E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 9.2E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 9.2E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0219 4607bef6f01d5b77e0d11f76a7676fcb 84 Pfam PF00366 Ribosomal protein S17 10 76 1.7E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO2038 b8b12049734f7e950c0c0409739d07e3 186 Pfam PF02613 Nitrate reductase delta subunit 37 147 1.3E-14 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPO2038 b8b12049734f7e950c0c0409739d07e3 186 PIRSF PIRSF004690 1 184 3.2E-62 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type YPO2038 b8b12049734f7e950c0c0409739d07e3 186 PANTHER PTHR34227 1 186 7.8E-90 T 22-04-2016 YPO2038 b8b12049734f7e950c0c0409739d07e3 186 PANTHER PTHR34227:SF2 1 186 7.8E-90 T 22-04-2016 YPO2038 b8b12049734f7e950c0c0409739d07e3 186 SUPERFAMILY SSF89155 2 180 1.11E-47 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPO2038 b8b12049734f7e950c0c0409739d07e3 186 Gene3D G3DSA:1.10.3480.10 1 181 5.4E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPO0201 8fe87bc8d61e31dd523adc4cb6199cb6 156 PANTHER PTHR11205 1 156 1.0E-96 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 YPO0201 8fe87bc8d61e31dd523adc4cb6199cb6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.4E-71 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YPO0201 8fe87bc8d61e31dd523adc4cb6199cb6 156 Gene3D G3DSA:1.10.455.10 8 156 2.4E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain YPO0201 8fe87bc8d61e31dd523adc4cb6199cb6 156 PIRSF PIRSF002122 3 156 1.9E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 YPO0201 8fe87bc8d61e31dd523adc4cb6199cb6 156 SUPERFAMILY SSF47973 6 149 7.59E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain YPO0201 8fe87bc8d61e31dd523adc4cb6199cb6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.5E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain YPO0201 8fe87bc8d61e31dd523adc4cb6199cb6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.144 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YPO0201 8fe87bc8d61e31dd523adc4cb6199cb6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 YPO3184 ad04a9c4e9eb6d14471c207a0dc82de9 149 Pfam PF03477 ATP cone domain 50 136 5.8E-16 T 22-04-2016 IPR005144 ATP-cone domain YPO3184 ad04a9c4e9eb6d14471c207a0dc82de9 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.5E-75 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 YPO3184 ad04a9c4e9eb6d14471c207a0dc82de9 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.723 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 YPO3184 ad04a9c4e9eb6d14471c207a0dc82de9 149 PANTHER PTHR30455:SF2 2 149 6.3E-74 T 22-04-2016 YPO3184 ad04a9c4e9eb6d14471c207a0dc82de9 149 PANTHER PTHR30455 2 149 6.3E-74 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 Pfam PF08335 GlnD PII-uridylyltransferase 213 352 5.5E-37 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 SUPERFAMILY SSF81891 450 490 3.24E-9 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 SUPERFAMILY SSF81891 525 669 3.24E-9 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 Gene3D G3DSA:1.10.3210.10 459 650 3.0E-26 T 22-04-2016 IPR006674 HD domain YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 35 912 342.275 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 PIRSF PIRSF006288 47 912 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 Gene3D G3DSA:3.30.460.10 108 202 2.6E-6 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 SUPERFAMILY SSF55021 835 906 2.79E-10 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 SUPERFAMILY SSF109604 478 579 9.74E-14 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 Pfam PF01842 ACT domain 837 897 5.6E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 Gene3D G3DSA:3.30.70.260 834 905 4.1E-10 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 SUPERFAMILY SSF55021 726 785 5.73E-9 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 Pfam PF01909 Nucleotidyltransferase domain 105 167 6.6E-7 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 SUPERFAMILY SSF81301 21 210 7.91E-24 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 SUPERFAMILY SSF81593 230 349 1.57E-10 T 22-04-2016 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 Pfam PF01966 HD domain 489 622 1.7E-13 T 22-04-2016 IPR006674 HD domain YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 69 906 6.4E-301 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YPO1042 24c32cb4bd3f9a4ec9ca77117b298d0b 912 SMART SM00471 485 632 3.6E-11 T 22-04-2016 IPR003607 HD/PDEase domain YPO0544 10004796a0077673b367565a33b90789 148 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 11 144 3.0E-61 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YPO0544 10004796a0077673b367565a33b90789 148 Pfam PF06610 L-alanine exporter 8 144 7.1E-72 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YPO0544 10004796a0077673b367565a33b90789 148 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 3 147 36.208 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YPO2119 a89057aff546d765bb6f501d9a8a7b80 1167 Pfam PF06791 Prophage tail length tape measure protein 321 556 7.3E-51 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal YPO2119 a89057aff546d765bb6f501d9a8a7b80 1167 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 926 1001 4.0E-17 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal YPO2119 a89057aff546d765bb6f501d9a8a7b80 1167 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 790 1110 1.3E-123 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal YPO1950 0f7ea8e4d581d0bdf63db23cd661cf97 405 SUPERFAMILY SSF55920 174 402 1.96E-47 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO1950 0f7ea8e4d581d0bdf63db23cd661cf97 405 PANTHER PTHR10804 93 115 5.0E-48 T 22-04-2016 YPO1950 0f7ea8e4d581d0bdf63db23cd661cf97 405 PANTHER PTHR10804 158 400 5.0E-48 T 22-04-2016 YPO1950 0f7ea8e4d581d0bdf63db23cd661cf97 405 Pfam PF00557 Metallopeptidase family M24 184 388 1.6E-34 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO1950 0f7ea8e4d581d0bdf63db23cd661cf97 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 177 9.3E-28 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 YPO1950 0f7ea8e4d581d0bdf63db23cd661cf97 405 Gene3D G3DSA:3.40.350.10 14 175 2.2E-13 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPO1950 0f7ea8e4d581d0bdf63db23cd661cf97 405 Gene3D G3DSA:3.90.230.10 176 401 4.7E-44 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO1950 0f7ea8e4d581d0bdf63db23cd661cf97 405 SUPERFAMILY SSF53092 8 90 2.09E-13 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPO1950 0f7ea8e4d581d0bdf63db23cd661cf97 405 SUPERFAMILY SSF53092 122 176 2.09E-13 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Gene3D G3DSA:3.40.50.970 593 789 1.2E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 SUPERFAMILY SSF52518 120 541 3.2E-88 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 PANTHER PTHR23152:SF4 1 935 0.0 T 22-04-2016 YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 2.4E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 PANTHER PTHR23152 1 935 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Gene3D G3DSA:3.40.50.970 162 550 7.0E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 2.3E-53 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 PIRSF PIRSF000157 1 934 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 1.8E-16 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 SMART SM00861 593 786 9.2E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 SUPERFAMILY SSF52518 576 793 7.23E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO1113 e21933b9adfa4f9a1fecfdcfbb1971f0 935 Pfam PF00676 Dehydrogenase E1 component 223 514 1.1E-50 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 YPO3685 573b1987a36233f8dfc9e856541151d2 311 Pfam PF13533 Biotin-lipoyl like 47 95 1.1E-18 T 22-04-2016 YPO3685 573b1987a36233f8dfc9e856541151d2 311 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 270 5.4E-31 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO3685 573b1987a36233f8dfc9e856541151d2 311 PANTHER PTHR30367 1 309 1.1E-213 T 22-04-2016 YPO3685 573b1987a36233f8dfc9e856541151d2 311 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 311 56.376 T 22-04-2016 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YPO3685 573b1987a36233f8dfc9e856541151d2 311 Pfam PF13437 HlyD family secretion protein 156 239 3.1E-9 T 22-04-2016 YPO3685 573b1987a36233f8dfc9e856541151d2 311 Gene3D G3DSA:2.40.50.100 47 80 7.5E-18 T 22-04-2016 YPO3685 573b1987a36233f8dfc9e856541151d2 311 Gene3D G3DSA:2.40.50.100 154 187 7.5E-18 T 22-04-2016 YPO3685 573b1987a36233f8dfc9e856541151d2 311 PANTHER PTHR30367:SF3 1 309 1.1E-213 T 22-04-2016 YPO3685 573b1987a36233f8dfc9e856541151d2 311 SUPERFAMILY SSF111369 46 231 1.07E-21 T 22-04-2016 YPO2606 01aaf7c8f5defc60f8b0ebfdc7931188 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 3.4E-28 T 22-04-2016 YPO2606 01aaf7c8f5defc60f8b0ebfdc7931188 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.333 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPO2606 01aaf7c8f5defc60f8b0ebfdc7931188 105 PANTHER PTHR21043 1 105 7.6E-48 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPO2606 01aaf7c8f5defc60f8b0ebfdc7931188 105 SUPERFAMILY SSF81301 4 105 8.66E-37 T 22-04-2016 YPO2606 01aaf7c8f5defc60f8b0ebfdc7931188 105 Gene3D G3DSA:3.30.460.10 4 105 1.4E-37 T 22-04-2016 YPO2606 01aaf7c8f5defc60f8b0ebfdc7931188 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.1E-37 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 Pfam PF12468 Type III secretion system leucine rich repeat protein 1 59 6.9E-21 T 22-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 Gene3D G3DSA:1.20.58.360 384 520 5.6E-52 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 Gene3D G3DSA:1.20.58.90 522 598 1.2E-27 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00364 108 127 0.06 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00364 150 170 530.0 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00364 129 148 0.0046 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00364 233 252 1.2 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00364 191 210 0.0027 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00364 84 106 160.0 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00364 171 190 2.7 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00364 212 231 0.061 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 310 525 2.0E-71 T 22-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 Gene3D G3DSA:1.20.1270.130 302 382 3.3E-26 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 PANTHER PTHR24365 496 527 1.6E-14 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 PANTHER PTHR24365 64 270 1.6E-14 T 22-04-2016 YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 Gene3D G3DSA:3.80.10.10 69 280 3.2E-36 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00369 107 131 56.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00369 190 214 25.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00369 215 235 100.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SMART SM00369 132 152 180.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype YPO1007 2fe76b8a543478ef54bac950acc9b94e 605 SUPERFAMILY SSF52058 68 281 1.84E-30 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPO2223 b98a7320123d0cbd989c531f2837260f 253 Pfam PF01569 PAP2 superfamily 80 228 4.0E-28 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO2223 b98a7320123d0cbd989c531f2837260f 253 Gene3D G3DSA:1.20.144.10 41 228 4.6E-24 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO2223 b98a7320123d0cbd989c531f2837260f 253 SUPERFAMILY SSF48317 11 118 3.14E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO2223 b98a7320123d0cbd989c531f2837260f 253 SUPERFAMILY SSF48317 150 237 3.14E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO2223 b98a7320123d0cbd989c531f2837260f 253 PANTHER PTHR14969:SF22 1 118 7.6E-108 T 22-04-2016 YPO2223 b98a7320123d0cbd989c531f2837260f 253 PANTHER PTHR14969:SF22 157 250 7.6E-108 T 22-04-2016 YPO2223 b98a7320123d0cbd989c531f2837260f 253 SMART SM00014 77 227 6.3E-36 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO2223 b98a7320123d0cbd989c531f2837260f 253 PANTHER PTHR14969 1 118 7.6E-108 T 22-04-2016 YPO2223 b98a7320123d0cbd989c531f2837260f 253 PANTHER PTHR14969 157 250 7.6E-108 T 22-04-2016 YPO2781 853e1cd9f40aebd9e51bd8d559d4de1f 182 Pfam PF00293 NUDIX domain 37 150 6.6E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO2781 853e1cd9f40aebd9e51bd8d559d4de1f 182 PIRSF PIRSF017340 2 171 5.4E-69 T 22-04-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 YPO2781 853e1cd9f40aebd9e51bd8d559d4de1f 182 PANTHER PTHR22769:SF25 1 181 9.9E-142 T 22-04-2016 YPO2781 853e1cd9f40aebd9e51bd8d559d4de1f 182 SUPERFAMILY SSF55811 11 167 7.45E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO2781 853e1cd9f40aebd9e51bd8d559d4de1f 182 Gene3D G3DSA:3.90.79.10 11 172 6.7E-61 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO2781 853e1cd9f40aebd9e51bd8d559d4de1f 182 PANTHER PTHR22769 1 181 9.9E-142 T 22-04-2016 YPO1645 65f543f3ed18da7237807472d0144603 285 Pfam PF05368 NmrA-like family 2 220 7.5E-24 T 22-04-2016 IPR008030 NmrA-like domain YPO1645 65f543f3ed18da7237807472d0144603 285 Gene3D G3DSA:3.40.50.720 2 217 4.8E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1645 65f543f3ed18da7237807472d0144603 285 PANTHER PTHR14194 2 282 2.8E-120 T 22-04-2016 YPO1645 65f543f3ed18da7237807472d0144603 285 SUPERFAMILY SSF51735 2 245 3.31E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1645 65f543f3ed18da7237807472d0144603 285 PANTHER PTHR14194:SF73 2 282 2.8E-120 T 22-04-2016 YPO3533 595794c186337972b3cc7ca01042129e 246 Pfam PF04225 Opacity-associated protein A LysM-like domain 161 245 3.7E-38 T 22-04-2016 IPR007340 Opacity-associated protein A YPO3533 595794c186337972b3cc7ca01042129e 246 Pfam PF08525 Opacity-associated protein A N-terminal motif 89 115 5.3E-7 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal YPO3316 6411df45064b368d5d83920ef251c8c2 507 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3316 6411df45064b368d5d83920ef251c8c2 507 Pfam PF00005 ABC transporter 279 434 2.7E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3316 6411df45064b368d5d83920ef251c8c2 507 Pfam PF00005 ABC transporter 24 174 1.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3316 6411df45064b368d5d83920ef251c8c2 507 SUPERFAMILY SSF52540 250 489 3.74E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3316 6411df45064b368d5d83920ef251c8c2 507 SMART SM00382 33 222 6.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3316 6411df45064b368d5d83920ef251c8c2 507 SMART SM00382 287 483 8.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3316 6411df45064b368d5d83920ef251c8c2 507 Gene3D G3DSA:3.40.50.300 8 232 4.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3316 6411df45064b368d5d83920ef251c8c2 507 PANTHER PTHR24220 10 389 1.4E-188 T 22-04-2016 YPO3316 6411df45064b368d5d83920ef251c8c2 507 PANTHER PTHR24220:SF308 10 389 1.4E-188 T 22-04-2016 YPO3316 6411df45064b368d5d83920ef251c8c2 507 SUPERFAMILY SSF52540 8 231 1.67E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3316 6411df45064b368d5d83920ef251c8c2 507 Gene3D G3DSA:3.40.50.300 259 495 6.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 SMART SM00490 262 343 9.9E-27 T 22-04-2016 IPR001650 Helicase, C-terminal YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 SUPERFAMILY SSF52540 76 359 1.17E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.417 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 Gene3D G3DSA:3.40.50.300 215 376 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 PANTHER PTHR24031:SF334 3 434 2.5E-234 T 22-04-2016 YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 Pfam PF00270 DEAD/DEAH box helicase 28 196 7.0E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 Gene3D G3DSA:3.40.50.300 3 214 1.0E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 PANTHER PTHR24031 3 434 2.5E-234 T 22-04-2016 YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 SMART SM00487 23 225 5.6E-58 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO2708 818a2ea06329b5784b6f5ce21c74943c 441 Pfam PF00271 Helicase conserved C-terminal domain 235 343 8.8E-26 T 22-04-2016 IPR001650 Helicase, C-terminal YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 PRINTS PR00419 Adrenodoxin reductase family signature 522 535 2.3E-35 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 PRINTS PR00419 Adrenodoxin reductase family signature 488 502 2.3E-35 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 PRINTS PR00419 Adrenodoxin reductase family signature 411 421 2.3E-35 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 PRINTS PR00419 Adrenodoxin reductase family signature 346 368 2.3E-35 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 PRINTS PR00419 Adrenodoxin reductase family signature 369 382 2.3E-35 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Gene3D G3DSA:3.50.50.60 435 598 1.2E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Gene3D G3DSA:3.30.70.20 63 89 4.9E-9 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 207 670 4.9E-238 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Gene3D G3DSA:3.40.50.720 599 668 1.0E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Gene3D G3DSA:3.40.50.720 348 434 1.0E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 345 657 9.6E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 PANTHER PTHR11938:SF93 1 106 0.0 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 PANTHER PTHR11938:SF93 298 670 0.0 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Gene3D G3DSA:3.30.70.20 90 140 2.5E-10 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 222 331 3.1E-35 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 PANTHER PTHR11938 1 106 0.0 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 PANTHER PTHR11938 298 670 0.0 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Gene3D G3DSA:1.10.1060.10 203 347 6.3E-47 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 SUPERFAMILY SSF54862 2 168 9.21E-45 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 SUPERFAMILY SSF54862 213 307 9.21E-45 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Pfam PF13247 4Fe-4S dicluster domain 55 153 5.3E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 SUPERFAMILY SSF51971 344 599 2.59E-66 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Gene3D G3DSA:3.30.70.20 141 170 3.5E-15 T 22-04-2016 YPO0342 d352ce3ad13c6841ab370e268944cd9e 671 Gene3D G3DSA:3.30.70.20 4 62 3.5E-15 T 22-04-2016 YPO0070 5b37906d5268982dce2c52f3a6f72404 273 Gene3D G3DSA:2.160.10.10 143 251 3.7E-31 T 22-04-2016 YPO0070 5b37906d5268982dce2c52f3a6f72404 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.9E-37 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 YPO0070 5b37906d5268982dce2c52f3a6f72404 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.0E-10 T 22-04-2016 IPR001451 Hexapeptide repeat YPO0070 5b37906d5268982dce2c52f3a6f72404 273 PANTHER PTHR23416 5 258 7.8E-156 T 22-04-2016 YPO0070 5b37906d5268982dce2c52f3a6f72404 273 PANTHER PTHR23416:SF2 5 258 7.8E-156 T 22-04-2016 YPO0070 5b37906d5268982dce2c52f3a6f72404 273 Gene3D G3DSA:1.10.3130.10 7 142 6.8E-50 T 22-04-2016 YPO0070 5b37906d5268982dce2c52f3a6f72404 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO0070 5b37906d5268982dce2c52f3a6f72404 273 SUPERFAMILY SSF51161 8 260 8.32E-67 T 22-04-2016 IPR011004 Trimeric LpxA-like YPO0070 5b37906d5268982dce2c52f3a6f72404 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 1.6E-73 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 YPO0070 5b37906d5268982dce2c52f3a6f72404 273 SMART SM00971 9 113 1.4E-59 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 2.3E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 SUPERFAMILY SSF53850 29 368 3.51E-102 T 22-04-2016 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 Gene3D G3DSA:3.40.190.10 43 141 5.8E-12 T 22-04-2016 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PANTHER PTHR30222 18 369 2.7E-172 T 22-04-2016 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PIRSF PIRSF019574 1 369 3.6E-142 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 PANTHER PTHR30222:SF11 18 369 2.7E-172 T 22-04-2016 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 334 4.9E-33 T 22-04-2016 YPO1331 fe686d400499aa0d8655e7f2650be2ce 369 Gene3D G3DSA:3.40.190.10 142 317 5.9E-75 T 22-04-2016 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 9.8E-71 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 PANTHER PTHR11652 1 116 2.2E-77 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 SUPERFAMILY SSF50249 3 123 2.23E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 2.2E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 Gene3D G3DSA:2.40.50.140 1 123 1.2E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 PIRSF PIRSF002133 1 124 1.6E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.507 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPO0200 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YPO2836 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF56024 500 682 1.3E-68 T 22-04-2016 YPO2836 aed1f874c049fc49690624692c92a94b 687 Pfam PF02503 Polyphosphate kinase middle domain 119 320 5.5E-43 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 YPO2836 aed1f874c049fc49690624692c92a94b 687 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 1.4E-143 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 YPO2836 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF56024 315 497 1.0E-55 T 22-04-2016 YPO2836 aed1f874c049fc49690624692c92a94b 687 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.8E-257 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YPO2836 aed1f874c049fc49690624692c92a94b 687 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 34.447 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YPO2836 aed1f874c049fc49690624692c92a94b 687 PIRSF PIRSF015589 1 687 9.4E-242 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YPO2836 aed1f874c049fc49690624692c92a94b 687 PANTHER PTHR30218:SF0 1 686 0.0 T 22-04-2016 YPO2836 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:3.30.870.10 315 499 1.3E-74 T 22-04-2016 YPO2836 aed1f874c049fc49690624692c92a94b 687 PANTHER PTHR30218 1 686 0.0 T 22-04-2016 YPO2836 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF143724 107 312 2.35E-60 T 22-04-2016 YPO2836 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:3.30.1840.10 106 300 9.5E-53 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 YPO2836 aed1f874c049fc49690624692c92a94b 687 Gene3D G3DSA:3.30.870.10 500 682 3.6E-68 T 22-04-2016 YPO2836 aed1f874c049fc49690624692c92a94b 687 SUPERFAMILY SSF140356 3 105 2.22E-34 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 YPO2836 aed1f874c049fc49690624692c92a94b 687 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.0E-31 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 YPO3119 0b4a923e235046d2194499828fe75992 624 PANTHER PTHR11528 7 623 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPO3119 0b4a923e235046d2194499828fe75992 624 Gene3D G3DSA:3.30.565.10 6 217 9.6E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3119 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 28 50 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPO3119 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 77 94 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPO3119 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 192 210 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPO3119 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 174 191 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPO3119 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 7 27 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPO3119 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 122 144 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPO3119 0b4a923e235046d2194499828fe75992 624 PRINTS PR00775 90kDa heat shock protein signature 95 112 3.2E-65 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YPO3119 0b4a923e235046d2194499828fe75992 624 SUPERFAMILY SSF110942 510 623 9.68E-36 T 22-04-2016 YPO3119 0b4a923e235046d2194499828fe75992 624 Pfam PF00183 Hsp90 protein 218 623 1.7E-126 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPO3119 0b4a923e235046d2194499828fe75992 624 SUPERFAMILY SSF55874 6 216 2.88E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3119 0b4a923e235046d2194499828fe75992 624 SUPERFAMILY SSF54211 230 485 1.97E-100 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3119 0b4a923e235046d2194499828fe75992 624 SMART SM00387 29 186 4.1E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3119 0b4a923e235046d2194499828fe75992 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPO3119 0b4a923e235046d2194499828fe75992 624 PIRSF PIRSF002583 2 624 1.2E-218 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPO3119 0b4a923e235046d2194499828fe75992 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 623 32.917 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YPO3119 0b4a923e235046d2194499828fe75992 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 8.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3119 0b4a923e235046d2194499828fe75992 624 PANTHER PTHR11528:SF44 7 623 0.0 T 22-04-2016 YPO0913 6e894ca5335473e5e96e3d5e4d401b3e 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 12 192 2.5E-52 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPO0913 6e894ca5335473e5e96e3d5e4d401b3e 198 SUPERFAMILY SSF100950 10 198 7.39E-59 T 22-04-2016 YPO0913 6e894ca5335473e5e96e3d5e4d401b3e 198 PANTHER PTHR23407 3 198 1.6E-75 T 22-04-2016 YPO0913 6e894ca5335473e5e96e3d5e4d401b3e 198 PIRSF PIRSF006806 7 195 3.1E-42 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPO0913 6e894ca5335473e5e96e3d5e4d401b3e 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 1.0E-56 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPO0913 6e894ca5335473e5e96e3d5e4d401b3e 198 PANTHER PTHR23407:SF1 3 198 1.6E-75 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPO0913 6e894ca5335473e5e96e3d5e4d401b3e 198 Gene3D G3DSA:3.40.50.10420 11 197 1.4E-61 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 PANTHER PTHR13779 10 447 2.2E-194 T 22-04-2016 YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 4.0E-64 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 PANTHER PTHR13779:SF7 10 447 2.2E-194 T 22-04-2016 YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:1.10.8.60 153 229 5.0E-6 T 22-04-2016 YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:1.10.3710.10 348 444 1.3E-32 T 22-04-2016 YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 SMART SM00382 49 165 4.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 7.0E-15 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 SUPERFAMILY SSF48019 252 434 1.25E-70 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:3.40.50.300 10 152 8.0E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 Pfam PF16193 AAA C-terminal domain 188 267 2.5E-20 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 Gene3D G3DSA:1.20.272.10 249 347 2.6E-42 T 22-04-2016 YPO1378 7a2f7ec7f24af39822dcce1724c4f9f4 447 SUPERFAMILY SSF52540 6 236 5.36E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0319 a16e694802aefb5803cad87046a89240 327 Gene3D G3DSA:3.90.180.10 3 147 5.2E-44 T 22-04-2016 IPR011032 GroES-like YPO0319 a16e694802aefb5803cad87046a89240 327 PANTHER PTHR11695:SF605 16 327 6.4E-135 T 22-04-2016 YPO0319 a16e694802aefb5803cad87046a89240 327 SUPERFAMILY SSF51735 113 274 1.41E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0319 a16e694802aefb5803cad87046a89240 327 Pfam PF00107 Zinc-binding dehydrogenase 152 257 1.3E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPO0319 a16e694802aefb5803cad87046a89240 327 SMART SM00829 11 325 1.1E-29 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPO0319 a16e694802aefb5803cad87046a89240 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 2.5E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPO0319 a16e694802aefb5803cad87046a89240 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 YPO0319 a16e694802aefb5803cad87046a89240 327 PANTHER PTHR11695 16 327 6.4E-135 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPO0319 a16e694802aefb5803cad87046a89240 327 Gene3D G3DSA:3.40.50.720 148 256 4.8E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0319 a16e694802aefb5803cad87046a89240 327 SUPERFAMILY SSF50129 2 145 7.55E-36 T 22-04-2016 IPR011032 GroES-like YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 SUPERFAMILY SSF53850 99 295 6.52E-26 T 22-04-2016 YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Pfam PF03466 LysR substrate binding domain 97 295 1.7E-26 T 22-04-2016 IPR005119 LysR, substrate-binding YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Gene3D G3DSA:3.40.190.10 98 186 5.0E-14 T 22-04-2016 YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Gene3D G3DSA:3.40.190.10 187 272 2.5E-16 T 22-04-2016 YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PANTHER PTHR30346 9 297 1.1E-156 T 22-04-2016 YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PANTHER PTHR30346:SF4 9 297 1.1E-156 T 22-04-2016 YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 SUPERFAMILY SSF46785 9 90 9.98E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 4.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 4.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Gene3D G3DSA:1.10.10.10 11 92 4.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1169 229da0f9f9a2dffcfe1c8dbb327f0fac 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 4.6E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3855 447182b51b84d2cdcbc4b9bfd78e424d 246 PANTHER PTHR34136:SF1 2 246 2.6E-105 T 22-04-2016 YPO3855 447182b51b84d2cdcbc4b9bfd78e424d 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 58.266 T 22-04-2016 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 YPO3855 447182b51b84d2cdcbc4b9bfd78e424d 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 231 4.1E-52 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 YPO3855 447182b51b84d2cdcbc4b9bfd78e424d 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 2.4E-73 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 YPO3855 447182b51b84d2cdcbc4b9bfd78e424d 246 PANTHER PTHR34136 2 246 2.6E-105 T 22-04-2016 YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 SUPERFAMILY SSF52540 279 525 3.17E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 260 3.5E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 PANTHER PTHR24220 8 411 5.4E-202 T 22-04-2016 YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 SUPERFAMILY SSF52540 6 257 1.38E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 SMART SM00382 312 502 3.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 SMART SM00382 35 235 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 Pfam PF00005 ABC transporter 303 454 3.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 Pfam PF00005 ABC transporter 27 185 2.2E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 PANTHER PTHR24220:SF574 8 411 5.4E-202 T 22-04-2016 YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 Gene3D G3DSA:3.40.50.300 5 259 8.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1270 ec42ac81c09ddc3598523b8ddc60d065 530 Gene3D G3DSA:3.40.50.300 275 527 5.3E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1511 040fa337528b8e652c609859aca0e6ca 565 SMART SM01274 81 261 9.4E-110 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.084 T 22-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 YPO1511 040fa337528b8e652c609859aca0e6ca 565 Gene3D G3DSA:3.40.50.720 269 562 1.2E-108 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1511 040fa337528b8e652c609859aca0e6ca 565 SMART SM00919 271 531 5.4E-133 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 4.0E-101 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 SUPERFAMILY SSF51735 271 562 5.63E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1511 040fa337528b8e652c609859aca0e6ca 565 PANTHER PTHR23406:SF25 1 565 0.0 T 22-04-2016 YPO1511 040fa337528b8e652c609859aca0e6ca 565 SUPERFAMILY SSF53223 6 270 4.89E-111 T 22-04-2016 YPO1511 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 183 205 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 242 260 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 408 424 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 87 111 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 147 176 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 298 314 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 PRINTS PR00072 Malic enzyme signature 267 283 9.8E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 PIRSF PIRSF000106 3 563 3.8E-228 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 Gene3D G3DSA:3.40.50.10380 17 268 2.4E-117 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 PANTHER PTHR23406 1 565 0.0 T 22-04-2016 YPO1511 040fa337528b8e652c609859aca0e6ca 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 2.2E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPO1511 040fa337528b8e652c609859aca0e6ca 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 YPO2713 4552ec45de98101f8681438f0c62fbfc 318 PANTHER PTHR38782 2 318 2.6E-143 T 22-04-2016 YPO2713 4552ec45de98101f8681438f0c62fbfc 318 Pfam PF17188 MucB/RseB C-terminal domain 219 312 1.2E-28 T 22-04-2016 IPR033436 MucB/RseB, C-terminal YPO2713 4552ec45de98101f8681438f0c62fbfc 318 PIRSF PIRSF005427 1 318 6.6E-88 T 22-04-2016 IPR005588 MucB/RseB YPO2713 4552ec45de98101f8681438f0c62fbfc 318 Gene3D G3DSA:2.50.20.10 122 185 9.3E-9 T 22-04-2016 YPO2713 4552ec45de98101f8681438f0c62fbfc 318 PANTHER PTHR38782:SF1 2 318 2.6E-143 T 22-04-2016 YPO2713 4552ec45de98101f8681438f0c62fbfc 318 Pfam PF03888 MucB/RseB N-terminal domain 28 196 1.3E-60 T 22-04-2016 IPR033434 MucB/RseB, N-terminal YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 Pfam PF00155 Aminotransferase class I and II 27 392 1.5E-78 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 PANTHER PTHR11879 1 396 0.0 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 PANTHER PTHR11879:SF7 1 396 0.0 T 22-04-2016 YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 SUPERFAMILY SSF53383 1 389 3.81E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 Gene3D G3DSA:3.40.640.10 46 316 9.9E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.8E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.8E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.8E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO0322 abf716f81bccde1b5128bc8f5dd45e1f 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.8E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO0007 4d111f438c7fc1cfc812338d3e7a6872 139 PANTHER PTHR37831:SF1 2 139 8.7E-73 T 22-04-2016 YPO0007 4d111f438c7fc1cfc812338d3e7a6872 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.831 T 22-04-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 YPO0007 4d111f438c7fc1cfc812338d3e7a6872 139 PANTHER PTHR37831 2 139 8.7E-73 T 22-04-2016 YPO0007 4d111f438c7fc1cfc812338d3e7a6872 139 SUPERFAMILY SSF102546 1 139 3.14E-44 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YPO0007 4d111f438c7fc1cfc812338d3e7a6872 139 Gene3D G3DSA:3.40.1650.10 1 139 1.6E-42 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YPO0007 4d111f438c7fc1cfc812338d3e7a6872 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.5E-49 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 YPO3864 67988ce40010d8ef29e166b3f3c925cb 376 PANTHER PTHR18964 1 372 3.0E-218 T 22-04-2016 YPO3864 67988ce40010d8ef29e166b3f3c925cb 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 1.7E-126 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain YPO3864 67988ce40010d8ef29e166b3f3c925cb 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 69.325 T 22-04-2016 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|UniPathway: UPA00566 YPO3864 67988ce40010d8ef29e166b3f3c925cb 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 5.6E-169 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 YPO3864 67988ce40010d8ef29e166b3f3c925cb 376 Gene3D G3DSA:3.40.50.2000 2 209 4.4E-89 T 22-04-2016 YPO3864 67988ce40010d8ef29e166b3f3c925cb 376 Gene3D G3DSA:3.40.50.2000 210 371 2.4E-66 T 22-04-2016 YPO3864 67988ce40010d8ef29e166b3f3c925cb 376 PANTHER PTHR18964:SF2 1 372 3.0E-218 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 YPO3864 67988ce40010d8ef29e166b3f3c925cb 376 SUPERFAMILY SSF53756 2 372 3.04E-142 T 22-04-2016 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 PANTHER PTHR23135 1 437 6.8E-175 T 22-04-2016 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 PANTHER PTHR23135:SF2 1 437 6.8E-175 T 22-04-2016 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 8.0E-123 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 Pfam PF08245 Mur ligase middle domain 110 280 7.3E-26 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 Gene3D G3DSA:3.40.50.720 3 93 3.3E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 SUPERFAMILY SSF51984 3 94 8.24E-25 T 22-04-2016 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 SUPERFAMILY SSF53244 299 437 4.58E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 Gene3D G3DSA:3.40.1190.10 94 299 1.0E-67 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 Gene3D G3DSA:3.90.190.20 300 433 8.2E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 SUPERFAMILY SSF53623 95 297 7.98E-56 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 356 8.8E-8 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0553 38efc4b3d343a3763e6a0b0214b1af35 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.209 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 PANTHER PTHR12561:SF5 1 338 1.3E-261 T 22-04-2016 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 PANTHER PTHR12561 1 338 1.3E-261 T 22-04-2016 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 SUPERFAMILY SSF55681 4 247 2.15E-78 T 22-04-2016 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 327 1.9E-124 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 Gene3D G3DSA:3.90.1550.10 1 247 2.1E-83 T 22-04-2016 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 3.3E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 3.7E-18 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 SUPERFAMILY SSF82649 248 336 7.32E-23 T 22-04-2016 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 Gene3D G3DSA:3.30.390.50 249 314 6.2E-13 T 22-04-2016 YPO2414 6b419c8d1454ae70331c8721e3d35cfd 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 57.052 T 22-04-2016 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 UniPathway: UPA00537|UniPathway: UPA00537 YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.40.50.300 88 204 1.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.40.50.300 3 17 1.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.052 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.40.50.300 18 40 1.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 SMART SM00072 3 187 4.6E-80 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 PANTHER PTHR23117 1 204 1.4E-104 T 22-04-2016 YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 Gene3D G3DSA:3.30.63.10 41 87 2.5E-27 T 22-04-2016 YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 PANTHER PTHR23117:SF13 1 204 1.4E-104 T 22-04-2016 YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 Pfam PF00625 Guanylate kinase 5 186 1.4E-66 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 SUPERFAMILY SSF52540 3 189 1.58E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0040 f8c9725c5164bdd779e2b848a3f2c202 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.6E-74 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YPO3869 b9d105ad27256075e90badec73548846 428 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPO3869 b9d105ad27256075e90badec73548846 428 PANTHER PTHR24031:SF173 1 425 1.4E-276 T 22-04-2016 YPO3869 b9d105ad27256075e90badec73548846 428 Gene3D G3DSA:3.40.50.300 8 230 6.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3869 b9d105ad27256075e90badec73548846 428 SUPERFAMILY SSF52540 84 363 9.86E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3869 b9d105ad27256075e90badec73548846 428 PANTHER PTHR24031 1 425 1.4E-276 T 22-04-2016 YPO3869 b9d105ad27256075e90badec73548846 428 SMART SM00490 270 351 4.5E-30 T 22-04-2016 IPR001650 Helicase, C-terminal YPO3869 b9d105ad27256075e90badec73548846 428 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.0E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO3869 b9d105ad27256075e90badec73548846 428 Pfam PF00271 Helicase conserved C-terminal domain 243 351 4.0E-28 T 22-04-2016 IPR001650 Helicase, C-terminal YPO3869 b9d105ad27256075e90badec73548846 428 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.548 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 YPO3869 b9d105ad27256075e90badec73548846 428 SMART SM00487 28 234 1.1E-50 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO3869 b9d105ad27256075e90badec73548846 428 Gene3D G3DSA:3.40.50.300 231 382 6.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0402 e2b54a51f5784d4bb48a2d948c65dd32 114 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 86 4.1E-25 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 YPO0402 e2b54a51f5784d4bb48a2d948c65dd32 114 Gene3D G3DSA:3.40.50.2300 3 99 7.9E-33 T 22-04-2016 YPO0402 e2b54a51f5784d4bb48a2d948c65dd32 114 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 97 3.4E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO0402 e2b54a51f5784d4bb48a2d948c65dd32 114 SUPERFAMILY SSF52794 4 98 1.92E-28 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO0402 e2b54a51f5784d4bb48a2d948c65dd32 114 PANTHER PTHR30505 1 114 1.6E-50 T 22-04-2016 YPO0077 aafc867753a2fa9226e5179bd8918b26 300 Gene3D G3DSA:3.30.70.1350 207 288 1.0E-30 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain YPO0077 aafc867753a2fa9226e5179bd8918b26 300 Gene3D G3DSA:1.20.1510.10 12 206 3.5E-44 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain YPO0077 aafc867753a2fa9226e5179bd8918b26 300 PANTHER PTHR11562:SF55 1 296 5.6E-128 T 22-04-2016 YPO0077 aafc867753a2fa9226e5179bd8918b26 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 60.694 T 22-04-2016 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 YPO0077 aafc867753a2fa9226e5179bd8918b26 300 SUPERFAMILY SSF160240 209 288 2.09E-24 T 22-04-2016 YPO0077 aafc867753a2fa9226e5179bd8918b26 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 288 9.2E-73 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO0077 aafc867753a2fa9226e5179bd8918b26 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 5.4E-25 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain YPO0077 aafc867753a2fa9226e5179bd8918b26 300 SUPERFAMILY SSF161111 9 207 7.72E-51 T 22-04-2016 YPO0077 aafc867753a2fa9226e5179bd8918b26 300 PANTHER PTHR11562 1 296 5.6E-128 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO0077 aafc867753a2fa9226e5179bd8918b26 300 Pfam PF01545 Cation efflux family 16 206 5.4E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Gene3D G3DSA:3.30.1360.40 236 333 2.3E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 6.9E-152 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 843 30.296 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Gene3D G3DSA:3.90.199.10 34 216 8.0E-85 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Gene3D G3DSA:1.10.268.10 363 497 6.6E-48 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 SUPERFAMILY SSF101904 533 848 3.66E-114 T 22-04-2016 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 PANTHER PTHR10169 450 812 0.0 T 22-04-2016 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 PANTHER PTHR10169 2 418 0.0 T 22-04-2016 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 3.8E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.4E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 737 9.9E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 4.8E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.8E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 789 9.1E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 SMART SM00434 11 499 1.2E-300 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 Gene3D G3DSA:2.120.10.90 531 839 2.8E-143 T 22-04-2016 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 SUPERFAMILY SSF56719 30 521 8.89E-183 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 PANTHER PTHR10169:SF48 450 812 0.0 T 22-04-2016 YPO1216 b7cb8836cfdf7c16023c3a0534bb4508 891 PANTHER PTHR10169:SF48 2 418 0.0 T 22-04-2016 YPO1853 b0f919a79b9194d96f18494584bcadee 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 8.8E-229 T 22-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 YPO1853 b0f919a79b9194d96f18494584bcadee 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 3.1E-123 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO1853 b0f919a79b9194d96f18494584bcadee 494 Pfam PF00474 Sodium:solute symporter family 35 437 3.0E-139 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO1853 b0f919a79b9194d96f18494584bcadee 494 PANTHER PTHR11819:SF148 4 486 6.4E-194 T 22-04-2016 YPO1853 b0f919a79b9194d96f18494584bcadee 494 PANTHER PTHR11819 4 486 6.4E-194 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO1853 b0f919a79b9194d96f18494584bcadee 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPO1853 b0f919a79b9194d96f18494584bcadee 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPO3390 c10d0addd4de96080e1056cf35dfecef 665 PANTHER PTHR30472 249 665 5.0E-208 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO3390 c10d0addd4de96080e1056cf35dfecef 665 SUPERFAMILY SSF81345 10 330 1.22E-59 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO3390 c10d0addd4de96080e1056cf35dfecef 665 Gene3D G3DSA:1.10.3470.10 349 664 1.5E-80 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO3390 c10d0addd4de96080e1056cf35dfecef 665 Gene3D G3DSA:1.10.3470.10 15 331 4.9E-72 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO3390 c10d0addd4de96080e1056cf35dfecef 665 Pfam PF01032 FecCD transport family 366 662 8.6E-72 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO3390 c10d0addd4de96080e1056cf35dfecef 665 Pfam PF01032 FecCD transport family 19 328 1.4E-66 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO3390 c10d0addd4de96080e1056cf35dfecef 665 SUPERFAMILY SSF81345 349 662 1.7E-69 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO3390 c10d0addd4de96080e1056cf35dfecef 665 PANTHER PTHR30472:SF16 249 665 5.0E-208 T 22-04-2016 YPO2219 29669d9323916383dd3b788b36c3472c 324 Gene3D G3DSA:3.40.190.10 92 184 1.5E-20 T 22-04-2016 YPO2219 29669d9323916383dd3b788b36c3472c 324 Pfam PF03466 LysR substrate binding domain 92 288 1.6E-40 T 22-04-2016 IPR005119 LysR, substrate-binding YPO2219 29669d9323916383dd3b788b36c3472c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2219 29669d9323916383dd3b788b36c3472c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2219 29669d9323916383dd3b788b36c3472c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2219 29669d9323916383dd3b788b36c3472c 324 PANTHER PTHR30126 1 309 1.5E-226 T 22-04-2016 YPO2219 29669d9323916383dd3b788b36c3472c 324 PANTHER PTHR30126:SF6 1 309 1.5E-226 T 22-04-2016 YPO2219 29669d9323916383dd3b788b36c3472c 324 SUPERFAMILY SSF46785 1 85 7.39E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2219 29669d9323916383dd3b788b36c3472c 324 Gene3D G3DSA:3.40.190.10 185 262 5.3E-32 T 22-04-2016 YPO2219 29669d9323916383dd3b788b36c3472c 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.4E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2219 29669d9323916383dd3b788b36c3472c 324 Gene3D G3DSA:1.10.10.10 1 81 4.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2219 29669d9323916383dd3b788b36c3472c 324 SUPERFAMILY SSF53850 91 322 2.27E-43 T 22-04-2016 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Gene3D G3DSA:3.30.1490.20 141 199 4.4E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 PANTHER PTHR11405 1 1076 0.0 T 22-04-2016 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 SUPERFAMILY SSF52440 558 676 1.11E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 5.5E-37 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-76 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.12 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.323 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.9E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.9E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.9E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.9E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.9E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.9E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.9E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 SUPERFAMILY SSF52335 939 1071 1.7E-34 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO0482 648a7717a9e49518c178afdfac51af2d 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Gene3D G3DSA:3.40.50.20 3 108 1.2E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO0482 648a7717a9e49518c178afdfac51af2d 1077 SUPERFAMILY SSF48108 396 554 5.62E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 2.6E-39 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 SUPERFAMILY SSF52440 1 127 2.73E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Gene3D G3DSA:3.30.1490.20 687 745 3.7E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 SUPERFAMILY SSF56059 128 401 2.3E-109 T 22-04-2016 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 PANTHER PTHR11405:SF5 1 1076 0.0 T 22-04-2016 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Pfam PF02142 MGS-like domain 957 1041 4.5E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Gene3D G3DSA:3.40.50.20 539 663 3.1E-62 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO0482 648a7717a9e49518c178afdfac51af2d 1077 SMART SM01096 424 547 2.5E-74 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 SUPERFAMILY SSF56059 674 934 4.77E-104 T 22-04-2016 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Gene3D G3DSA:3.40.50.1380 939 1072 1.4E-39 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO0482 648a7717a9e49518c178afdfac51af2d 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Gene3D G3DSA:3.30.470.20 746 933 4.0E-80 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Gene3D G3DSA:3.30.470.20 200 399 2.8E-75 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO0482 648a7717a9e49518c178afdfac51af2d 1077 SMART SM00851 956 1042 1.3E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO0482 648a7717a9e49518c178afdfac51af2d 1077 Gene3D G3DSA:1.10.1030.10 400 538 1.6E-51 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0810 391bbf8c505c735e3d7e76d9cd6b3959 198 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 7.7E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO0810 391bbf8c505c735e3d7e76d9cd6b3959 198 Pfam PF13633 Prokaryotic N-terminal methylation site 7 31 3.3E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO0810 391bbf8c505c735e3d7e76d9cd6b3959 198 SUPERFAMILY SSF54523 47 197 4.34E-34 T 22-04-2016 YPO0810 391bbf8c505c735e3d7e76d9cd6b3959 198 PANTHER PTHR39583 1 197 5.8E-63 T 22-04-2016 YPO0810 391bbf8c505c735e3d7e76d9cd6b3959 198 Gene3D G3DSA:3.10.610.10 39 148 1.4E-9 T 22-04-2016 YPO0810 391bbf8c505c735e3d7e76d9cd6b3959 198 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 196 4.9E-30 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YPO0810 391bbf8c505c735e3d7e76d9cd6b3959 198 Gene3D G3DSA:2.10.70.20 151 196 3.3E-11 T 22-04-2016 YPO0810 391bbf8c505c735e3d7e76d9cd6b3959 198 PANTHER PTHR39583:SF1 1 197 5.8E-63 T 22-04-2016 YPO0810 391bbf8c505c735e3d7e76d9cd6b3959 198 Pfam PF11612 Type II secretion system (T2SS), protein J 59 193 1.7E-21 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YPO2269 80ddf7259c2e25ef7940f62dca48eb2a 222 SUPERFAMILY SSF52540 1 207 2.03E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2269 80ddf7259c2e25ef7940f62dca48eb2a 222 Pfam PF13500 AAA domain 4 205 3.0E-29 T 22-04-2016 YPO2269 80ddf7259c2e25ef7940f62dca48eb2a 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 9.3E-44 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO2269 80ddf7259c2e25ef7940f62dca48eb2a 222 Gene3D G3DSA:3.40.50.300 4 217 1.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2269 80ddf7259c2e25ef7940f62dca48eb2a 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 24.798 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO2269 80ddf7259c2e25ef7940f62dca48eb2a 222 PANTHER PTHR21343:SF12 1 220 4.7E-173 T 22-04-2016 YPO2269 80ddf7259c2e25ef7940f62dca48eb2a 222 PIRSF PIRSF006755 1 221 1.4E-68 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO2269 80ddf7259c2e25ef7940f62dca48eb2a 222 PANTHER PTHR21343 1 220 4.7E-173 T 22-04-2016 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 150 2.2E-6 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 Hamap MF_00520 Ribulokinase [araB]. 10 567 52.242 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 300 510 1.2E-36 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 Gene3D G3DSA:3.30.420.40 12 291 2.7E-30 T 22-04-2016 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 SUPERFAMILY SSF53067 13 293 1.14E-21 T 22-04-2016 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 11 557 1.7E-224 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 Gene3D G3DSA:3.30.420.40 294 554 1.3E-44 T 22-04-2016 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 PANTHER PTHR10196:SF62 1 567 0.0 T 22-04-2016 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 SUPERFAMILY SSF53067 294 557 2.1E-44 T 22-04-2016 YPO2254 49c31dcb2c07bd6e79d68e01fde98d6a 567 PANTHER PTHR10196 1 567 0.0 T 22-04-2016 YPO2975 0a0dcb2052f386557814932fdb9c7a2c 411 PANTHER PTHR11751 18 398 1.7E-269 T 22-04-2016 YPO2975 0a0dcb2052f386557814932fdb9c7a2c 411 Gene3D G3DSA:3.40.640.10 50 263 4.2E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO2975 0a0dcb2052f386557814932fdb9c7a2c 411 Gene3D G3DSA:3.90.1150.10 264 395 4.3E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO2975 0a0dcb2052f386557814932fdb9c7a2c 411 PANTHER PTHR11751:SF302 18 398 1.7E-269 T 22-04-2016 YPO2975 0a0dcb2052f386557814932fdb9c7a2c 411 Pfam PF00155 Aminotransferase class I and II 37 387 4.6E-57 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO2975 0a0dcb2052f386557814932fdb9c7a2c 411 SUPERFAMILY SSF53383 10 394 5.57E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1180 17672127f17ae460973859d3e1255c11 367 Pfam PF05076 Suppressor of fused protein (SUFU) 200 363 2.5E-22 T 22-04-2016 IPR020941 Suppressor of fused-like domain YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 SUPERFAMILY SSF51344 4 87 6.93E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 SUPERFAMILY SSF46604 90 138 1.83E-14 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 88 1.0E-38 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.0 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 2.3E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 Gene3D G3DSA:2.60.15.10 4 92 1.8E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 1.7E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 Gene3D G3DSA:1.20.5.440 93 135 6.8E-24 T 22-04-2016 YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 PANTHER PTHR13822 1 140 4.9E-47 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4120 d3e43d909f353a6ae466c95f4e0b3af9 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 1.1E-44 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 Gene3D G3DSA:3.40.50.10490 450 609 7.9E-68 T 22-04-2016 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 Pfam PF01380 SIS domain 289 417 2.0E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 Pfam PF01380 SIS domain 462 591 5.7E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 Gene3D G3DSA:3.40.50.10490 245 449 5.5E-64 T 22-04-2016 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 Pfam PF13522 Glutamine amidotransferase domain 65 184 3.6E-21 T 22-04-2016 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 SUPERFAMILY SSF56235 2 233 7.98E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO4118 ec118a2f9e3574a13bbab437992e5549 609 PANTHER PTHR10937:SF0 1 609 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 Gene3D G3DSA:3.60.20.10 2 239 2.0E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO4118 ec118a2f9e3574a13bbab437992e5549 609 PANTHER PTHR10937 1 609 0.0 T 22-04-2016 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.997 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.6E-263 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 YPO4118 ec118a2f9e3574a13bbab437992e5549 609 SUPERFAMILY SSF53697 245 609 9.39E-113 T 22-04-2016 YPO3076 c9db1f3a1a2359430423b0a20b0a6367 174 PANTHER PTHR23046:SF2 14 173 6.4E-90 T 22-04-2016 YPO3076 c9db1f3a1a2359430423b0a20b0a6367 174 Gene3D G3DSA:3.40.50.7700 9 172 1.5E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPO3076 c9db1f3a1a2359430423b0a20b0a6367 174 SMART SM01001 13 164 3.4E-100 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPO3076 c9db1f3a1a2359430423b0a20b0a6367 174 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 15 169 9.8E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPO3076 c9db1f3a1a2359430423b0a20b0a6367 174 PANTHER PTHR23046 14 173 6.4E-90 T 22-04-2016 YPO3076 c9db1f3a1a2359430423b0a20b0a6367 174 Pfam PF00731 AIR carboxylase 14 162 4.9E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPO3076 c9db1f3a1a2359430423b0a20b0a6367 174 PIRSF PIRSF001338 10 173 4.1E-66 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 YPO3076 c9db1f3a1a2359430423b0a20b0a6367 174 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 32.224 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPO3076 c9db1f3a1a2359430423b0a20b0a6367 174 SUPERFAMILY SSF52255 14 172 6.02E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YPO2958 508a45504b2860d201b9cce019b1b0d5 339 PANTHER PTHR30006:SF6 8 334 8.6E-130 T 22-04-2016 YPO2958 508a45504b2860d201b9cce019b1b0d5 339 PIRSF PIRSF002825 7 339 3.0E-80 T 22-04-2016 IPR026045 Ferric binding protein YPO2958 508a45504b2860d201b9cce019b1b0d5 339 SUPERFAMILY SSF53850 33 332 1.86E-72 T 22-04-2016 YPO2958 508a45504b2860d201b9cce019b1b0d5 339 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 YPO2958 508a45504b2860d201b9cce019b1b0d5 339 Pfam PF13343 Bacterial extracellular solute-binding protein 81 309 1.2E-27 T 22-04-2016 YPO2958 508a45504b2860d201b9cce019b1b0d5 339 Gene3D G3DSA:3.40.190.10 132 270 7.2E-54 T 22-04-2016 YPO2958 508a45504b2860d201b9cce019b1b0d5 339 PANTHER PTHR30006 8 334 8.6E-130 T 22-04-2016 YPO2958 508a45504b2860d201b9cce019b1b0d5 339 Gene3D G3DSA:3.40.190.10 11 127 8.4E-27 T 22-04-2016 YPO2958 508a45504b2860d201b9cce019b1b0d5 339 Gene3D G3DSA:3.40.190.10 271 313 8.4E-27 T 22-04-2016 YPO1587 45fc8f8325566646535f05fa453694dc 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 2.8E-150 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO1587 45fc8f8325566646535f05fa453694dc 348 Gene3D G3DSA:3.20.20.140 6 347 5.9E-132 T 22-04-2016 YPO1587 45fc8f8325566646535f05fa453694dc 348 PIRSF PIRSF001237 4 348 3.3E-141 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO1587 45fc8f8325566646535f05fa453694dc 348 PANTHER PTHR11647 1 320 2.3E-155 T 22-04-2016 YPO1587 45fc8f8325566646535f05fa453694dc 348 PANTHER PTHR11647:SF59 1 320 2.3E-155 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO1587 45fc8f8325566646535f05fa453694dc 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO1587 45fc8f8325566646535f05fa453694dc 348 Pfam PF01979 Amidohydrolase family 15 307 2.5E-19 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPO1587 45fc8f8325566646535f05fa453694dc 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 54.344 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO1587 45fc8f8325566646535f05fa453694dc 348 SUPERFAMILY SSF51556 6 347 1.33E-145 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 79 84 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 139 153 1.1E-6 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 69 84 1.1E-6 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 215 227 1.1E-6 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 Pfam PF00089 Trypsin 47 243 2.5E-12 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 PANTHER PTHR15462 25 265 1.4E-63 T 22-04-2016 YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 SUPERFAMILY SSF50494 33 269 4.66E-31 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 Gene3D G3DSA:2.40.10.10 53 164 3.6E-14 T 22-04-2016 YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 Gene3D G3DSA:2.40.10.10 172 270 4.7E-8 T 22-04-2016 YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 SMART SM00020 43 273 0.0039 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 YPO2319 b6d809cd7dac7c399793d404dfc7462f 278 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 216 227 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 PANTHER PTHR22594 370 571 2.3E-258 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 PANTHER PTHR22594 1 296 2.3E-258 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.888 T 22-04-2016 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF55681 420 583 2.4E-103 T 22-04-2016 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF55681 108 287 2.4E-103 T 22-04-2016 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF55261 288 419 2.4E-45 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 PANTHER PTHR22594:SF5 370 571 2.3E-258 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 PANTHER PTHR22594:SF5 1 296 2.3E-258 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:2.40.50.140 1 106 2.4E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 SUPERFAMILY SSF50249 1 105 2.67E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 4.1E-273 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 9.0E-18 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:3.30.930.10 131 275 3.2E-112 T 22-04-2016 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:3.30.930.10 414 584 3.2E-112 T 22-04-2016 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.5E-107 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 Gene3D G3DSA:3.30.1360.30 276 413 1.8E-47 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 Pfam PF02938 GAD domain 307 406 3.0E-30 T 22-04-2016 IPR029351 GAD domain YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2053 2f08a1dca2c7d9bee0308fecaf3469ba 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO3353 f8679aaa2f186bc66bff1f913ef3e3ba 151 PIRSF PIRSF005384 2 148 2.1E-53 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO3353 f8679aaa2f186bc66bff1f913ef3e3ba 151 Gene3D G3DSA:3.40.1400.10 2 148 2.4E-57 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO3353 f8679aaa2f186bc66bff1f913ef3e3ba 151 Pfam PF02502 Ribose/Galactose Isomerase 4 142 4.8E-51 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO3353 f8679aaa2f186bc66bff1f913ef3e3ba 151 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 143 4.9E-45 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 YPO3353 f8679aaa2f186bc66bff1f913ef3e3ba 151 SUPERFAMILY SSF89623 2 146 3.01E-52 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO3353 f8679aaa2f186bc66bff1f913ef3e3ba 151 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 2.0E-47 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO3353 f8679aaa2f186bc66bff1f913ef3e3ba 151 PANTHER PTHR30345 1 151 5.5E-75 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 436 2.2E-59 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:1.10.3170.10 156 349 2.1E-62 T 22-04-2016 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Pfam PF13361 UvrD-like helicase C-terminal domain 517 808 4.5E-17 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:1.10.486.10 583 728 2.2E-59 T 22-04-2016 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1193 0.0 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070 119 216 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070 300 772 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070 794 1189 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070 1 90 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 SUPERFAMILY SSF52980 903 1195 1.39E-89 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 729 864 8.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 449 580 8.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 SUPERFAMILY SSF52540 119 203 7.62E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 SUPERFAMILY SSF52540 12 81 7.62E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 SUPERFAMILY SSF52540 325 819 7.62E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1194 15.353 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 121 150 8.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 7 83 8.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.40.50.300 350 448 8.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070:SF23 119 216 0.0 T 22-04-2016 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070:SF23 300 772 0.0 T 22-04-2016 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070:SF23 794 1189 0.0 T 22-04-2016 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 PANTHER PTHR11070:SF23 1 90 0.0 T 22-04-2016 YPO1020 8f832f14dd212e68f224e3ae9f602fd5 1220 Gene3D G3DSA:3.90.320.10 893 1196 1.7E-103 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 YPO0754 ce56ba08e0a1416fa4dea72cd9d2b91a 100 Pfam PF10840 Protein of unknown function (DUF2645) 4 100 3.7E-34 T 22-04-2016 IPR022553 Protein of unknown function DUF2645 YPO0754 ce56ba08e0a1416fa4dea72cd9d2b91a 100 ProDom PD069399 MEMBRANE INNER YJEO SIMILAR INTEGRAL ORF22 ESCHERICHIA TRANSMEMBRANE COLI 1 100 2.0E-50 T 22-04-2016 IPR022553 Protein of unknown function DUF2645 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 SUPERFAMILY SSF53335 396 701 4.0E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 SUPERFAMILY SSF53335 258 373 3.98E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 SUPERFAMILY SSF53335 146 217 3.98E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 453 664 1.9E-19 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.241 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 Gene3D G3DSA:3.40.50.150 255 349 3.5E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 Gene3D G3DSA:3.40.50.150 150 214 3.5E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 PANTHER PTHR18895:SF62 401 679 9.0E-134 T 22-04-2016 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 Gene3D G3DSA:3.40.50.150 432 704 7.5E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 PANTHER PTHR18895 401 679 9.0E-134 T 22-04-2016 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 PIRSF PIRSF037618 1 703 2.6E-293 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 Pfam PF02926 THUMP domain 23 152 2.9E-15 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 1.7E-62 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO1418 915ef067e4c9fe9b1b7e40f603f3477a 706 SMART SM00981 56 154 1.3E-18 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 SMART SM00448 2 112 6.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 SUPERFAMILY SSF46894 145 240 1.22E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 Gene3D G3DSA:3.40.50.2300 2 124 1.1E-29 T 22-04-2016 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 PANTHER PTHR26402 147 245 3.3E-162 T 22-04-2016 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 PANTHER PTHR26402 2 130 3.3E-162 T 22-04-2016 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 2.1E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 SMART SM00862 163 239 3.1E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 Gene3D G3DSA:1.10.10.10 143 242 1.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 SUPERFAMILY SSF52172 2 127 3.42E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 PANTHER PTHR26402:SF548 147 245 3.3E-162 T 22-04-2016 YPO2308 5fd5828b9ae138544e8d9fe279e9bc31 248 PANTHER PTHR26402:SF548 2 130 3.3E-162 T 22-04-2016 YPO2057 382003c113630b89e8f6fb5eba34475d 204 SUPERFAMILY SSF47781 66 136 6.95E-23 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPO2057 382003c113630b89e8f6fb5eba34475d 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 3.0E-67 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YPO2057 382003c113630b89e8f6fb5eba34475d 204 Gene3D G3DSA:1.10.8.10 159 201 1.1E-20 T 22-04-2016 YPO2057 382003c113630b89e8f6fb5eba34475d 204 Pfam PF01330 RuvA N terminal domain 2 62 3.9E-18 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 YPO2057 382003c113630b89e8f6fb5eba34475d 204 Pfam PF07499 RuvA, C-terminal domain 160 202 1.0E-13 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 YPO2057 382003c113630b89e8f6fb5eba34475d 204 SUPERFAMILY SSF46929 159 202 5.36E-10 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 YPO2057 382003c113630b89e8f6fb5eba34475d 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 32.583 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YPO2057 382003c113630b89e8f6fb5eba34475d 204 SMART SM00278 73 92 0.054 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPO2057 382003c113630b89e8f6fb5eba34475d 204 SMART SM00278 108 127 0.15 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPO2057 382003c113630b89e8f6fb5eba34475d 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.8E-17 T 22-04-2016 YPO2057 382003c113630b89e8f6fb5eba34475d 204 Gene3D G3DSA:2.40.50.140 2 64 1.0E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2057 382003c113630b89e8f6fb5eba34475d 204 PANTHER PTHR33796 2 202 1.1E-82 T 22-04-2016 YPO2057 382003c113630b89e8f6fb5eba34475d 204 Gene3D G3DSA:1.10.150.20 67 138 1.5E-32 T 22-04-2016 YPO2057 382003c113630b89e8f6fb5eba34475d 204 SUPERFAMILY SSF50249 2 63 9.71E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 Gene3D G3DSA:1.10.260.40 9 58 2.3E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 Gene3D G3DSA:3.40.50.2300 183 317 3.7E-53 T 22-04-2016 YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 SMART SM00354 9 79 3.7E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 SUPERFAMILY SSF53822 68 340 9.42E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 1.7E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 Gene3D G3DSA:3.40.50.2300 59 182 6.4E-45 T 22-04-2016 YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 PANTHER PTHR30146 9 341 5.0E-156 T 22-04-2016 YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 PANTHER PTHR30146:SF4 9 341 5.0E-156 T 22-04-2016 YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 SUPERFAMILY SSF47413 8 67 9.09E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0108 fa8bbcacffd89fa0b3f943e8d9c55428 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 7.4E-42 T 22-04-2016 YPO0404 b43cb486c251794fa50d3e680ea3b3b9 361 PANTHER PTHR30505:SF1 1 360 2.6E-165 T 22-04-2016 YPO0404 b43cb486c251794fa50d3e680ea3b3b9 361 PANTHER PTHR30505 1 360 2.6E-165 T 22-04-2016 YPO0404 b43cb486c251794fa50d3e680ea3b3b9 361 Pfam PF02378 Phosphotransferase system, EIIC 18 283 1.1E-12 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPO0404 b43cb486c251794fa50d3e680ea3b3b9 361 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 9 336 3.8E-92 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 YPO0255 2b0ead2e24a201e274c361877f42b874 210 PANTHER PTHR26402:SF590 3 210 2.8E-154 T 22-04-2016 YPO0255 2b0ead2e24a201e274c361877f42b874 210 SUPERFAMILY SSF52172 2 128 6.83E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPO0255 2b0ead2e24a201e274c361877f42b874 210 Gene3D G3DSA:3.40.50.2300 2 150 2.7E-34 T 22-04-2016 YPO0255 2b0ead2e24a201e274c361877f42b874 210 PANTHER PTHR26402 3 210 2.8E-154 T 22-04-2016 YPO0255 2b0ead2e24a201e274c361877f42b874 210 Gene3D G3DSA:1.10.10.10 151 208 8.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0255 2b0ead2e24a201e274c361877f42b874 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0255 2b0ead2e24a201e274c361877f42b874 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 7.3E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0255 2b0ead2e24a201e274c361877f42b874 210 SMART SM00421 146 203 8.8E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0255 2b0ead2e24a201e274c361877f42b874 210 SMART SM00448 3 116 1.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0255 2b0ead2e24a201e274c361877f42b874 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.6E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0255 2b0ead2e24a201e274c361877f42b874 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.6E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0255 2b0ead2e24a201e274c361877f42b874 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.6E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0255 2b0ead2e24a201e274c361877f42b874 210 SUPERFAMILY SSF46894 144 208 1.19E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO0255 2b0ead2e24a201e274c361877f42b874 210 Pfam PF00072 Response regulator receiver domain 6 116 2.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 SMART SM00342 192 275 9.8E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 Pfam PF12833 Helix-turn-helix domain 206 277 1.3E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 SUPERFAMILY SSF46689 228 280 5.82E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 Gene3D G3DSA:2.60.120.280 26 161 5.9E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 PANTHER PTHR11019 1 283 5.2E-189 T 22-04-2016 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 PANTHER PTHR11019:SF107 1 283 5.2E-189 T 22-04-2016 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 6.7E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 6.7E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 Gene3D G3DSA:1.10.10.60 176 228 4.0E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 SUPERFAMILY SSF51182 16 91 3.2E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 282 54.367 T 22-04-2016 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 Gene3D G3DSA:1.10.10.60 229 278 1.3E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0333 e59a1ce00dacc60c9e4c78568c4301fa 290 Pfam PF02311 AraC-like ligand binding domain 23 141 1.5E-15 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 348 421 8.7E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 267 344 1.3E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 92 172 4.2E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF07244 Surface antigen variable number repeat 176 263 4.0E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 795 4.8E-282 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 Pfam PF01103 Surface antigen 448 795 6.1E-101 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 795 25.905 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 Gene3D G3DSA:2.40.160.50 389 792 1.5E-23 T 22-04-2016 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 PIRSF PIRSF006076 1 795 9.6E-252 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 PANTHER PTHR12815 5 795 0.0 T 22-04-2016 YPO1052 f8b6c09000e8ed815ff56d6c04540b8a 795 PANTHER PTHR12815:SF11 5 795 0.0 T 22-04-2016 YPO2335 9bd6cce06dffd57749c4b3074c7136f2 313 Gene3D G3DSA:3.40.50.620 23 206 7.2E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2335 9bd6cce06dffd57749c4b3074c7136f2 313 PANTHER PTHR11807:SF16 9 288 3.6E-124 T 22-04-2016 YPO2335 9bd6cce06dffd57749c4b3074c7136f2 313 SUPERFAMILY SSF52402 17 236 3.26E-54 T 22-04-2016 YPO2335 9bd6cce06dffd57749c4b3074c7136f2 313 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.377 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 YPO2335 9bd6cce06dffd57749c4b3074c7136f2 313 PANTHER PTHR11807 9 288 3.6E-124 T 22-04-2016 YPO2335 9bd6cce06dffd57749c4b3074c7136f2 313 PIRSF PIRSF004976 2 270 5.3E-76 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 YPO2335 9bd6cce06dffd57749c4b3074c7136f2 313 Pfam PF01171 PP-loop family 42 203 1.1E-12 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPO2348 6c78c94698fd4439d1be5b5fb34439f1 465 PANTHER PTHR38605:SF1 1 465 9.1E-266 T 22-04-2016 YPO2348 6c78c94698fd4439d1be5b5fb34439f1 465 Pfam PF04317 YcjX-like family, DUF463 20 464 6.6E-190 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPO2348 6c78c94698fd4439d1be5b5fb34439f1 465 PIRSF PIRSF019381 1 465 2.8E-219 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPO2348 6c78c94698fd4439d1be5b5fb34439f1 465 PANTHER PTHR38605 1 465 9.1E-266 T 22-04-2016 YPO0561 03c3fa9d1b52ad5ba66ba21ea20291d6 306 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 5.3E-159 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPO0561 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Gene3D G3DSA:3.30.230.20 3 125 8.4E-46 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPO0561 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.6E-108 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPO0561 03c3fa9d1b52ad5ba66ba21ea20291d6 306 PANTHER PTHR33694 1 306 4.6E-148 T 22-04-2016 YPO0561 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Gene3D G3DSA:3.30.1700.10 129 283 9.5E-63 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPO0561 03c3fa9d1b52ad5ba66ba21ea20291d6 306 SUPERFAMILY SSF54211 3 124 1.06E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0561 03c3fa9d1b52ad5ba66ba21ea20291d6 306 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 49.084 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YPO0561 03c3fa9d1b52ad5ba66ba21ea20291d6 306 PANTHER PTHR33694:SF1 1 306 4.6E-148 T 22-04-2016 YPO0561 03c3fa9d1b52ad5ba66ba21ea20291d6 306 SUPERFAMILY SSF54211 134 278 1.44E-54 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0891 47d3f9e6b1da54d7840e3344d20424b9 238 PANTHER PTHR35272 5 237 6.8E-122 T 22-04-2016 YPO0891 47d3f9e6b1da54d7840e3344d20424b9 238 SUPERFAMILY SSF54423 22 80 1.44E-17 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPO0891 47d3f9e6b1da54d7840e3344d20424b9 238 Gene3D G3DSA:3.10.450.70 22 82 3.6E-26 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal YPO0891 47d3f9e6b1da54d7840e3344d20424b9 238 SUPERFAMILY SSF52833 88 230 1.2E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0891 47d3f9e6b1da54d7840e3344d20424b9 238 PANTHER PTHR35272:SF3 5 237 6.8E-122 T 22-04-2016 YPO0891 47d3f9e6b1da54d7840e3344d20424b9 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPO0891 47d3f9e6b1da54d7840e3344d20424b9 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 4.3E-15 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPO0891 47d3f9e6b1da54d7840e3344d20424b9 238 Pfam PF13098 Thioredoxin-like domain 104 227 3.1E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0891 47d3f9e6b1da54d7840e3344d20424b9 238 Gene3D G3DSA:3.40.30.10 99 232 5.2E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1349 b156399faa7b0f7802c2feee3147d610 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 214 9.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1349 b156399faa7b0f7802c2feee3147d610 222 SUPERFAMILY SSF161098 6 200 1.83E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1349 b156399faa7b0f7802c2feee3147d610 222 Gene3D G3DSA:1.10.3720.10 4 214 1.4E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1349 b156399faa7b0f7802c2feee3147d610 222 PANTHER PTHR30614:SF10 1 221 7.1E-161 T 22-04-2016 YPO1349 b156399faa7b0f7802c2feee3147d610 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 2.9E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO1349 b156399faa7b0f7802c2feee3147d610 222 PANTHER PTHR30614 1 221 7.1E-161 T 22-04-2016 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 PANTHER PTHR30002:SF4 2 129 2.6E-220 T 22-04-2016 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 PANTHER PTHR30002:SF4 146 403 2.6E-220 T 22-04-2016 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 SUPERFAMILY SSF46548 171 288 5.02E-20 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 380 4.5E-146 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 347 51.146 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 Pfam PF13484 4Fe-4S double cluster binding domain 224 288 7.7E-19 T 22-04-2016 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 PANTHER PTHR30002 2 129 2.6E-220 T 22-04-2016 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 PANTHER PTHR30002 146 403 2.6E-220 T 22-04-2016 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 Pfam PF08331 Domain of unknown function (DUF1730) 62 128 2.0E-21 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO0367 8c0f4d594663a93bff63acf56c95fd88 411 Gene3D G3DSA:3.30.70.20 222 290 2.7E-6 T 22-04-2016 YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 Pfam PF05954 Phage late control gene D protein (GPD) 34 355 4.4E-63 T 22-04-2016 YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 SUPERFAMILY SSF69279 22 203 1.3E-46 T 22-04-2016 YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 PANTHER PTHR32305:SF7 31 782 0.0 T 22-04-2016 YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 PANTHER PTHR32305 31 782 0.0 T 22-04-2016 YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 1.3E-189 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 22 515 2.4E-73 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 Gene3D G3DSA:3.55.50.10 112 205 6.1E-30 T 22-04-2016 YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 Gene3D G3DSA:4.10.180.10 297 312 3.1E-7 T 22-04-2016 IPR027440 Capsid protein alpha-like domain YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 SUPERFAMILY SSF69279 204 383 5.1E-51 T 22-04-2016 YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 Gene3D G3DSA:2.40.50.230 390 470 2.3E-25 T 22-04-2016 IPR006531 Gp5 N-terminal YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 SUPERFAMILY SSF69255 382 471 9.94E-26 T 22-04-2016 YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 751 8.2E-51 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPO1472 4cdb7ecb5886d04c638c2f5bb69cf7ac 782 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 591 4.0E-35 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPO0491 cde8bdf112d6f6bdb272743f7269632b 125 SUPERFAMILY SSF110069 5 125 1.96E-46 T 22-04-2016 IPR007474 ApaG domain YPO0491 cde8bdf112d6f6bdb272743f7269632b 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 6.5E-33 T 22-04-2016 IPR007474 ApaG domain YPO0491 cde8bdf112d6f6bdb272743f7269632b 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.387 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG YPO0491 cde8bdf112d6f6bdb272743f7269632b 125 PANTHER PTHR14289 3 121 8.9E-60 T 22-04-2016 YPO0491 cde8bdf112d6f6bdb272743f7269632b 125 Gene3D G3DSA:2.60.40.1470 6 125 6.1E-44 T 22-04-2016 IPR007474 ApaG domain YPO2547 b65d7d1ca69076ddb0364b64161c8d8d 181 PANTHER PTHR33269:SF2 1 180 1.8E-112 T 22-04-2016 YPO2547 b65d7d1ca69076ddb0364b64161c8d8d 181 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 3.8E-33 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 YPO2547 b65d7d1ca69076ddb0364b64161c8d8d 181 PANTHER PTHR33269 1 180 1.8E-112 T 22-04-2016 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:1.20.1580.10 694 820 9.2E-55 T 22-04-2016 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 PANTHER PTHR32282 1 946 0.0 T 22-04-2016 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:3.40.50.300 2 51 1.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:3.40.50.300 613 672 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:3.40.50.300 821 942 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:3.40.50.300 478 596 1.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:1.20.1580.10 407 477 6.8E-54 T 22-04-2016 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:1.20.1580.10 91 129 6.8E-54 T 22-04-2016 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:1.20.1580.10 251 284 6.8E-54 T 22-04-2016 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:3.30.1490.20 130 153 4.5E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:3.30.1490.20 200 248 4.5E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Gene3D G3DSA:1.10.8.280 286 406 1.5E-42 T 22-04-2016 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 SUPERFAMILY SSF52540 619 911 1.82E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.946 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 Pfam PF00005 ABC transporter 623 860 1.7E-8 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 PANTHER PTHR32282:SF2 1 946 0.0 T 22-04-2016 YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 SUPERFAMILY SSF52540 1 204 1.64E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0324 4cb519d9fa40aacdec15ae930d6ad079 947 SUPERFAMILY SSF52540 430 569 1.64E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 PANTHER PTHR30033 1 453 9.0E-120 T 22-04-2016 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 Pfam PF00460 Flagella basal body rod protein 4 33 5.0E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 4.4E-13 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 4.4E-13 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 4.4E-13 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 4.4E-13 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 PRINTS PR01005 Flagellar hook-associated protein signature 444 453 4.4E-13 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 4.4E-13 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 452 1.5E-126 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 410 451 1.4E-10 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 SUPERFAMILY SSF64518 143 452 8.63E-21 T 22-04-2016 YPO0732 83b0909bb426f1cf1eae9b647ce0a00c 453 PANTHER PTHR30033:SF1 1 453 9.0E-120 T 22-04-2016 YPO1507 2aee45c47a9fe1ab0be86ab4f580d3ba 335 SUPERFAMILY SSF53822 30 334 3.53E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO1507 2aee45c47a9fe1ab0be86ab4f580d3ba 335 Pfam PF13407 Periplasmic binding protein domain 32 303 1.3E-63 T 22-04-2016 IPR025997 Periplasmic binding protein YPO1507 2aee45c47a9fe1ab0be86ab4f580d3ba 335 PANTHER PTHR30036 6 335 6.5E-153 T 22-04-2016 YPO1507 2aee45c47a9fe1ab0be86ab4f580d3ba 335 Gene3D G3DSA:3.40.50.2300 147 297 2.1E-54 T 22-04-2016 YPO1507 2aee45c47a9fe1ab0be86ab4f580d3ba 335 Gene3D G3DSA:3.40.50.2300 31 146 1.1E-27 T 22-04-2016 YPO1507 2aee45c47a9fe1ab0be86ab4f580d3ba 335 PANTHER PTHR30036:SF2 6 335 6.5E-153 T 22-04-2016 YPO3150 672dab55635d0342b33c91029a4181cd 232 PANTHER PTHR11587 1 215 4.0E-106 T 22-04-2016 YPO3150 672dab55635d0342b33c91029a4181cd 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 50.435 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YPO3150 672dab55635d0342b33c91029a4181cd 232 PANTHER PTHR11587:SF3 1 215 4.0E-106 T 22-04-2016 YPO3150 672dab55635d0342b33c91029a4181cd 232 SUPERFAMILY SSF52402 1 215 3.53E-67 T 22-04-2016 YPO3150 672dab55635d0342b33c91029a4181cd 232 PIRSF PIRSF006293 1 226 1.9E-82 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YPO3150 672dab55635d0342b33c91029a4181cd 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 5.4E-83 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YPO3150 672dab55635d0342b33c91029a4181cd 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 214 2.6E-81 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YPO3150 672dab55635d0342b33c91029a4181cd 232 Gene3D G3DSA:3.40.50.620 1 217 6.3E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0706 780ac8ab015a02d520bb10f3b045038f 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0706 780ac8ab015a02d520bb10f3b045038f 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0706 780ac8ab015a02d520bb10f3b045038f 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0706 780ac8ab015a02d520bb10f3b045038f 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0706 780ac8ab015a02d520bb10f3b045038f 377 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 2.8E-36 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0706 780ac8ab015a02d520bb10f3b045038f 377 PANTHER PTHR30531:SF0 1 358 1.7E-100 T 22-04-2016 YPO0706 780ac8ab015a02d520bb10f3b045038f 377 SUPERFAMILY SSF160544 248 352 5.62E-37 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPO0706 780ac8ab015a02d520bb10f3b045038f 377 PANTHER PTHR30531 1 358 1.7E-100 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0706 780ac8ab015a02d520bb10f3b045038f 377 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 351 4.3E-107 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 YPO0706 780ac8ab015a02d520bb10f3b045038f 377 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 344 4.3E-109 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0706 780ac8ab015a02d520bb10f3b045038f 377 Gene3D G3DSA:3.40.1690.10 215 354 4.0E-59 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPO1101 50e116b31e60ef598a5f32ef8b556d7a 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 122 4.0E-60 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YPO1101 50e116b31e60ef598a5f32ef8b556d7a 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.81 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YPO1101 50e116b31e60ef598a5f32ef8b556d7a 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site YPO1101 50e116b31e60ef598a5f32ef8b556d7a 160 PANTHER PTHR30308:SF2 1 160 2.2E-87 T 22-04-2016 YPO1101 50e116b31e60ef598a5f32ef8b556d7a 160 PANTHER PTHR30308 1 160 2.2E-87 T 22-04-2016 YPO1101 50e116b31e60ef598a5f32ef8b556d7a 160 Pfam PF01668 SmpB protein 13 75 8.2E-30 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YPO1101 50e116b31e60ef598a5f32ef8b556d7a 160 SUPERFAMILY SSF74982 8 138 1.7E-51 T 22-04-2016 IPR023620 Small protein B YPO1101 50e116b31e60ef598a5f32ef8b556d7a 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 2.2E-54 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YPO1101 50e116b31e60ef598a5f32ef8b556d7a 160 Gene3D G3DSA:2.40.280.10 13 133 1.8E-51 T 22-04-2016 IPR023620 Small protein B YPO0944 126ea43ab637b7893419103127db5b80 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 7 91 1.9E-30 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 YPO0944 126ea43ab637b7893419103127db5b80 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 20.444 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPO0944 126ea43ab637b7893419103127db5b80 96 SMART SM01152 7 83 2.3E-38 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPO0944 126ea43ab637b7893419103127db5b80 96 PANTHER PTHR13420 10 96 9.6E-30 T 22-04-2016 YPO0944 126ea43ab637b7893419103127db5b80 96 SUPERFAMILY SSF69786 4 95 2.75E-32 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPO0944 126ea43ab637b7893419103127db5b80 96 Gene3D G3DSA:3.30.1200.10 5 90 1.9E-30 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPO0944 126ea43ab637b7893419103127db5b80 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 1.1E-25 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YPO0933 6b0ee1f37217aaedf18f6a7e612ac122 235 PANTHER PTHR33607 1 232 1.3E-72 T 22-04-2016 YPO0933 6b0ee1f37217aaedf18f6a7e612ac122 235 SUPERFAMILY SSF54060 25 230 1.29E-86 T 22-04-2016 YPO0933 6b0ee1f37217aaedf18f6a7e612ac122 235 Pfam PF04231 Endonuclease I 44 229 1.9E-42 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.616 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF00467 KOW motif 130 162 6.2E-8 T 22-04-2016 IPR005824 KOW YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00738 6 115 2.0E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:3.30.70.940 6 116 7.6E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF82679 6 116 3.4E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF50104 125 180 1.15E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:2.30.30.30 120 180 2.0E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00739 127 154 2.0E-6 T 22-04-2016 IPR005824 KOW YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.9E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PANTHER PTHR30265 3 180 9.4E-87 T 22-04-2016 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPO3752 3f0db8b79c3aa21e2123b26b5ffd87e7 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.1E-70 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 SMART SM00448 1 112 8.9E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 SMART SM00862 150 226 3.3E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 Pfam PF00072 Response regulator receiver domain 3 113 2.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 Gene3D G3DSA:1.10.10.10 131 227 1.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 SUPERFAMILY SSF46894 128 226 2.47E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 SUPERFAMILY SSF52172 1 122 2.42E-41 T 22-04-2016 IPR011006 CheY-like superfamily YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 PANTHER PTHR26402:SF481 1 227 1.6E-127 T 22-04-2016 YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 Gene3D G3DSA:3.40.50.2300 1 123 6.6E-39 T 22-04-2016 YPO3009 08915654ee53f8e0ed4901c269a0d79f 235 PANTHER PTHR26402 1 227 1.6E-127 T 22-04-2016 YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 SUPERFAMILY SSF56176 439 521 6.82E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 Gene3D G3DSA:3.10.580.10 290 426 6.0E-16 T 22-04-2016 YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 Pfam PF00571 CBS domain 304 360 0.0012 T 22-04-2016 IPR000644 CBS domain YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 Pfam PF00571 CBS domain 375 424 2.7E-6 T 22-04-2016 IPR000644 CBS domain YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 Gene3D G3DSA:3.30.465.10 436 519 9.9E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 SMART SM01091 441 520 4.8E-26 T 22-04-2016 IPR005170 Transporter-associated domain YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 Pfam PF03741 Integral membrane protein TerC family 15 203 1.3E-49 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 PANTHER PTHR22777 1 528 0.0 T 22-04-2016 YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 PANTHER PTHR22777:SF14 1 528 0.0 T 22-04-2016 YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 Pfam PF03471 Transporter associated domain 442 519 5.1E-18 T 22-04-2016 IPR005170 Transporter-associated domain YPO1527 bd82aa2cfc32bdabdcfa4e8ecfee7f29 528 SUPERFAMILY SSF54631 292 426 5.43E-25 T 22-04-2016 YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 Pfam PF14697 4Fe-4S dicluster domain 110 164 3.2E-17 T 22-04-2016 YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 PIRSF PIRSF005784 3 188 5.8E-86 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 185 1.7E-85 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.54 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 Pfam PF04060 Putative Fe-S cluster 44 76 1.9E-14 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 SUPERFAMILY SSF54862 38 176 1.5E-29 T 22-04-2016 YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 PANTHER PTHR11938:SF64 1 187 2.3E-98 T 22-04-2016 YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 PANTHER PTHR11938 1 187 2.3E-98 T 22-04-2016 YPO2245 4b89a15d2addfeb8ef1cb033043452fa 188 Gene3D G3DSA:3.30.70.20 102 175 1.6E-16 T 22-04-2016 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 SMART SM00322 60 125 1.6E-6 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 PANTHER PTHR11760 2 232 4.8E-149 T 22-04-2016 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.1140.32 108 207 5.9E-48 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-100 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.300.20 18 107 1.1E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 PANTHER PTHR11760:SF19 2 232 4.8E-149 T 22-04-2016 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-41 T 22-04-2016 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.264 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54814 2 106 1.91E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YPO0216 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF07650 KH domain 38 111 7.8E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 YPO2316 2ee67b904335fd0083de1a4006d72078 184 SUPERFAMILY SSF81342 5 180 4.87E-37 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPO2316 2ee67b904335fd0083de1a4006d72078 184 Pfam PF01292 Prokaryotic cytochrome b561 11 180 5.3E-25 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YPO2316 2ee67b904335fd0083de1a4006d72078 184 PANTHER PTHR30529 3 184 4.3E-93 T 22-04-2016 YPO2316 2ee67b904335fd0083de1a4006d72078 184 Gene3D G3DSA:1.20.950.20 90 170 5.1E-5 T 22-04-2016 YPO2316 2ee67b904335fd0083de1a4006d72078 184 PANTHER PTHR30529:SF5 3 184 4.3E-93 T 22-04-2016 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.8E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.30.70.1450 390 437 1.8E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02080 TrkA-C domain 390 451 3.1E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02080 TrkA-C domain 156 225 5.9E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.40.50.720 1 152 3.1E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.40.50.720 233 376 4.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF51735 1 152 2.15E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF116726 390 440 1.44E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF116726 148 226 2.75E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02254 TrkA-N domain 235 350 8.8E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 Pfam PF02254 TrkA-N domain 3 124 1.2E-29 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 PANTHER PTHR13789 416 438 2.7E-86 T 22-04-2016 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 PANTHER PTHR13789 1 170 2.7E-86 T 22-04-2016 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 SUPERFAMILY SSF51735 232 376 5.43E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 PANTHER PTHR13789:SF225 416 438 2.7E-86 T 22-04-2016 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 PANTHER PTHR13789:SF225 1 170 2.7E-86 T 22-04-2016 YPO0239 0d6c2155cbbd3fb750b4d57747c0739b 458 Gene3D G3DSA:3.30.70.1450 153 226 1.9E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO3570 63758fe31c5ba44fd18fb97135ac76d3 87 SUPERFAMILY SSF82657 4 85 5.36E-30 T 22-04-2016 IPR002634 BolA protein YPO3570 63758fe31c5ba44fd18fb97135ac76d3 87 Pfam PF01722 BolA-like protein 21 77 1.1E-15 T 22-04-2016 IPR002634 BolA protein YPO3570 63758fe31c5ba44fd18fb97135ac76d3 87 PANTHER PTHR12735:SF24 1 87 1.5E-33 T 22-04-2016 YPO3570 63758fe31c5ba44fd18fb97135ac76d3 87 PANTHER PTHR12735 1 87 1.5E-33 T 22-04-2016 YPO3570 63758fe31c5ba44fd18fb97135ac76d3 87 Gene3D G3DSA:3.30.300.90 3 83 1.1E-28 T 22-04-2016 IPR002634 BolA protein YPO3570 63758fe31c5ba44fd18fb97135ac76d3 87 PIRSF PIRSF003113 1 86 1.1E-22 T 22-04-2016 IPR002634 BolA protein YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 58 520 5.7E-186 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 Pfam PF03958 Bacterial type II/III secretion system short domain 205 297 8.1E-19 T 22-04-2016 IPR005644 NolW-like YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 PANTHER PTHR30332 1 523 0.0 T 22-04-2016 YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 498 517 8.7E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 217 234 8.7E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 407 422 8.7E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 299 319 8.7E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 373 392 8.7E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 465 498 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 Pfam PF00263 Bacterial type II and III secretion system protein 360 516 2.9E-35 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YPO0257 79712372196d3f0fc57a4a880f3edb1e 523 PANTHER PTHR30332:SF4 1 523 0.0 T 22-04-2016 YPO828a 28f562bebd62320431c43ca54f57d7da 144 PANTHER PTHR33360:SF2 11 137 2.8E-81 T 22-04-2016 YPO828a 28f562bebd62320431c43ca54f57d7da 144 SMART SM01321 3 121 2.9E-31 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO828a 28f562bebd62320431c43ca54f57d7da 144 Gene3D G3DSA:3.30.70.1290 10 124 3.3E-47 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO828a 28f562bebd62320431c43ca54f57d7da 144 SUPERFAMILY SSF143422 8 121 1.02E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO828a 28f562bebd62320431c43ca54f57d7da 144 PANTHER PTHR33360 11 137 2.8E-81 T 22-04-2016 YPO828a 28f562bebd62320431c43ca54f57d7da 144 Pfam PF01797 Transposase IS200 like 10 121 1.6E-31 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YPO0579 ef4e497b385551a2704cf5018066c8d3 469 Gene3D G3DSA:1.10.2020.10 46 137 6.8E-42 T 22-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 YPO0579 ef4e497b385551a2704cf5018066c8d3 469 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 48.974 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 YPO0579 ef4e497b385551a2704cf5018066c8d3 469 PANTHER PTHR30068 2 469 0.0 T 22-04-2016 YPO0579 ef4e497b385551a2704cf5018066c8d3 469 Gene3D G3DSA:3.20.20.140 3 44 2.9E-162 T 22-04-2016 YPO0579 ef4e497b385551a2704cf5018066c8d3 469 Gene3D G3DSA:3.20.20.140 139 466 2.9E-162 T 22-04-2016 YPO0579 ef4e497b385551a2704cf5018066c8d3 469 PANTHER PTHR30068:SF4 2 469 0.0 T 22-04-2016 YPO0579 ef4e497b385551a2704cf5018066c8d3 469 SUPERFAMILY SSF51556 3 465 4.76E-179 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO0579 ef4e497b385551a2704cf5018066c8d3 469 Pfam PF02614 Glucuronate isomerase 1 465 6.0E-225 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 YPO1854 b46978b86a7d70825d7f3058ecf0760c 282 PANTHER PTHR31632 1 265 7.4E-109 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YPO1854 b46978b86a7d70825d7f3058ecf0760c 282 Pfam PF03239 Iron permease FTR1 family 1 259 1.3E-67 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YPO1709 a2ca0730e9259104521c6e627ee7b89e 870 PANTHER PTHR30451 510 867 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1709 a2ca0730e9259104521c6e627ee7b89e 870 PANTHER PTHR30451 8 493 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1709 a2ca0730e9259104521c6e627ee7b89e 870 Pfam PF13954 PapC N-terminal domain 46 189 2.0E-37 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPO1709 a2ca0730e9259104521c6e627ee7b89e 870 Pfam PF13953 PapC C-terminal domain 786 849 5.7E-18 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPO1709 a2ca0730e9259104521c6e627ee7b89e 870 PANTHER PTHR30451:SF1 510 867 0.0 T 22-04-2016 YPO1709 a2ca0730e9259104521c6e627ee7b89e 870 PANTHER PTHR30451:SF1 8 493 0.0 T 22-04-2016 YPO1709 a2ca0730e9259104521c6e627ee7b89e 870 Pfam PF00577 Outer membrane usher protein 206 775 2.1E-167 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1709 a2ca0730e9259104521c6e627ee7b89e 870 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 317 327 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YPO1709 a2ca0730e9259104521c6e627ee7b89e 870 SUPERFAMILY SSF141729 63 181 4.84E-30 T 22-04-2016 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 Pfam PF07715 TonB-dependent Receptor Plug Domain 104 196 6.3E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 PANTHER PTHR32552 1 66 0.0 T 22-04-2016 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 PANTHER PTHR32552 95 758 0.0 T 22-04-2016 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 105 758 1.0E-154 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 Gene3D G3DSA:2.40.170.20 220 758 6.4E-88 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 PANTHER PTHR32552:SF14 1 66 0.0 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 PANTHER PTHR32552:SF14 95 758 0.0 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 69 - T 22-04-2016 IPR010916 TonB box, conserved site YPO1753 68431e4d2043d5423b8fa4d477c44412 758 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 741 758 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YPO1753 68431e4d2043d5423b8fa4d477c44412 758 SUPERFAMILY SSF56935 95 758 1.71E-88 T 22-04-2016 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 SUPERFAMILY SSF56935 55 66 1.71E-88 T 22-04-2016 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 Gene3D G3DSA:2.170.130.10 55 216 7.8E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO1753 68431e4d2043d5423b8fa4d477c44412 758 Pfam PF00593 TonB dependent receptor 564 756 5.0E-13 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1037 fdf5ba87c49bac44ab534c5ae1e0470c 110 SUPERFAMILY SSF158452 1 108 9.29E-39 T 22-04-2016 IPR023376 YqcC-like domain YPO1037 fdf5ba87c49bac44ab534c5ae1e0470c 110 PANTHER PTHR39586 2 110 4.5E-45 T 22-04-2016 YPO1037 fdf5ba87c49bac44ab534c5ae1e0470c 110 PIRSF PIRSF006257 1 109 1.1E-44 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 YPO1037 fdf5ba87c49bac44ab534c5ae1e0470c 110 Pfam PF04287 tRNA pseudouridine synthase C 7 104 1.7E-34 T 22-04-2016 IPR023376 YqcC-like domain YPO1037 fdf5ba87c49bac44ab534c5ae1e0470c 110 Gene3D G3DSA:1.20.1440.40 1 106 4.9E-41 T 22-04-2016 IPR023376 YqcC-like domain YPO0119 969728a9c6b5d98a43cbd07d72270146 214 PANTHER PTHR33795 40 214 9.9E-89 T 22-04-2016 YPO0119 969728a9c6b5d98a43cbd07d72270146 214 PANTHER PTHR33795:SF1 40 214 9.9E-89 T 22-04-2016 YPO0119 969728a9c6b5d98a43cbd07d72270146 214 Gene3D G3DSA:1.10.10.10 48 95 6.3E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0119 969728a9c6b5d98a43cbd07d72270146 214 SUPERFAMILY SSF48295 33 96 4.08E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPO0119 969728a9c6b5d98a43cbd07d72270146 214 Pfam PF13518 Helix-turn-helix domain 106 158 5.0E-12 T 22-04-2016 YPO0119 969728a9c6b5d98a43cbd07d72270146 214 Pfam PF13518 Helix-turn-helix domain 51 96 5.6E-9 T 22-04-2016 YPO0119 969728a9c6b5d98a43cbd07d72270146 214 Gene3D G3DSA:1.10.10.60 103 197 5.9E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0119 969728a9c6b5d98a43cbd07d72270146 214 SUPERFAMILY SSF46689 100 201 1.02E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 Gene3D G3DSA:3.30.450.20 8 111 2.1E-24 T 22-04-2016 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 Gene3D G3DSA:3.30.450.20 129 229 1.6E-20 T 22-04-2016 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 PANTHER PTHR24422 1 415 3.9E-251 T 22-04-2016 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 SUPERFAMILY SSF55785 8 109 1.52E-24 T 22-04-2016 IPR000014 PAS domain YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 303 330 1.2E-15 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 332 361 1.2E-15 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 Pfam PF13426 PAS domain 9 111 7.5E-16 T 22-04-2016 IPR000014 PAS domain YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 SUPERFAMILY SSF58104 201 411 2.22E-47 T 22-04-2016 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 Gene3D G3DSA:1.10.287.950 230 411 1.8E-42 T 22-04-2016 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 Pfam PF08448 PAS fold 130 233 1.4E-12 T 22-04-2016 IPR013656 PAS fold-4 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 266 411 1.1E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 SMART SM00091 117 184 0.0059 T 22-04-2016 IPR000014 PAS domain YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 SMART SM00091 1 64 39.0 T 22-04-2016 IPR000014 PAS domain YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 SUPERFAMILY SSF55785 129 232 2.97E-22 T 22-04-2016 IPR000014 PAS domain YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 SMART SM00086 70 112 8.9E-7 T 22-04-2016 IPR001610 PAC motif YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 SMART SM00086 192 234 5.5E-4 T 22-04-2016 IPR001610 PAC motif YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 117 1.2E-18 T 22-04-2016 IPR000014 PAS domain YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 126 239 6.1E-15 T 22-04-2016 IPR000014 PAS domain YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 SMART SM00283 223 413 4.9E-10 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO2515 0b8c0b2456babeec18ebc2c031d2423a 415 PANTHER PTHR24422:SF10 1 415 3.9E-251 T 22-04-2016 YPO3318 d4ead34a59b875124edac3c669f80458 324 PANTHER PTHR32196 40 296 1.6E-83 T 22-04-2016 YPO3318 d4ead34a59b875124edac3c669f80458 324 PANTHER PTHR32196:SF9 40 296 1.6E-83 T 22-04-2016 YPO3318 d4ead34a59b875124edac3c669f80458 324 Pfam PF13407 Periplasmic binding protein domain 40 295 7.6E-58 T 22-04-2016 IPR025997 Periplasmic binding protein YPO3318 d4ead34a59b875124edac3c669f80458 324 Gene3D G3DSA:3.40.50.2300 38 154 9.3E-35 T 22-04-2016 YPO3318 d4ead34a59b875124edac3c669f80458 324 Gene3D G3DSA:3.40.50.2300 155 316 9.2E-49 T 22-04-2016 YPO3318 d4ead34a59b875124edac3c669f80458 324 SUPERFAMILY SSF53822 39 316 4.42E-77 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO3510 87933ac9b489c0a4c758a509db6351d7 328 PANTHER PTHR22911:SF55 3 328 8.6E-187 T 22-04-2016 YPO3510 87933ac9b489c0a4c758a509db6351d7 328 SUPERFAMILY SSF103481 43 147 1.26E-14 T 22-04-2016 YPO3510 87933ac9b489c0a4c758a509db6351d7 328 PANTHER PTHR22911 3 328 8.6E-187 T 22-04-2016 YPO3510 87933ac9b489c0a4c758a509db6351d7 328 Pfam PF00892 EamA-like transporter family 161 273 2.3E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO3510 87933ac9b489c0a4c758a509db6351d7 328 Pfam PF00892 EamA-like transporter family 9 144 1.4E-28 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PANTHER PTHR11922 1 190 3.9E-92 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 2.8E-91 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 4.0E-53 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 Gene3D G3DSA:3.40.50.880 2 190 7.0E-66 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.9E-14 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.9E-14 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.9E-14 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.9E-6 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.9E-6 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 6.4E-37 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 6.4E-37 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.4E-37 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 6.4E-37 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 6.4E-37 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 6.4E-37 T 22-04-2016 YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 SUPERFAMILY SSF52317 1 190 2.46E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO0169 7b1647bfe050383a84a4357598cfcdc9 191 PANTHER PTHR11922:SF7 1 190 3.9E-92 T 22-04-2016 YPO1118 0d8aad14b395aa6cfda647c91a42682b 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 2.7E-110 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YPO1118 0d8aad14b395aa6cfda647c91a42682b 379 PIRSF PIRSF000267 2 378 1.1E-130 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YPO1118 0d8aad14b395aa6cfda647c91a42682b 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.3E-192 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YPO1118 0d8aad14b395aa6cfda647c91a42682b 379 PANTHER PTHR30365:SF6 1 379 2.4E-201 T 22-04-2016 YPO1118 0d8aad14b395aa6cfda647c91a42682b 379 PANTHER PTHR30365 1 379 2.4E-201 T 22-04-2016 YPO2336 1dddfba5fc25049b7a874eeeee46ced9 334 Pfam PF07859 alpha/beta hydrolase fold 89 308 2.8E-21 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 YPO2336 1dddfba5fc25049b7a874eeeee46ced9 334 SUPERFAMILY SSF53474 68 320 6.26E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2336 1dddfba5fc25049b7a874eeeee46ced9 334 PANTHER PTHR23024:SF47 66 329 2.4E-57 T 22-04-2016 YPO2336 1dddfba5fc25049b7a874eeeee46ced9 334 PANTHER PTHR23024 66 329 2.4E-57 T 22-04-2016 YPO2336 1dddfba5fc25049b7a874eeeee46ced9 334 Gene3D G3DSA:3.40.50.1820 58 330 7.3E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3502 07a0e97eeca823af35261a5bd613dc03 644 Pfam PF01434 Peptidase family M41 382 591 1.1E-81 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 YPO3502 07a0e97eeca823af35261a5bd613dc03 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 3.6E-247 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 YPO3502 07a0e97eeca823af35261a5bd613dc03 644 Gene3D G3DSA:1.10.8.60 332 406 1.7E-28 T 22-04-2016 YPO3502 07a0e97eeca823af35261a5bd613dc03 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 YPO3502 07a0e97eeca823af35261a5bd613dc03 644 SUPERFAMILY SSF140990 402 601 3.14E-72 T 22-04-2016 YPO3502 07a0e97eeca823af35261a5bd613dc03 644 Gene3D G3DSA:3.40.50.300 144 331 1.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3502 07a0e97eeca823af35261a5bd613dc03 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.2E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO3502 07a0e97eeca823af35261a5bd613dc03 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 37.379 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 YPO3502 07a0e97eeca823af35261a5bd613dc03 644 SUPERFAMILY SSF52540 142 391 6.57E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3502 07a0e97eeca823af35261a5bd613dc03 644 Pfam PF06480 FtsH Extracellular 5 93 9.5E-15 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 YPO3502 07a0e97eeca823af35261a5bd613dc03 644 SMART SM00382 184 323 1.9E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3502 07a0e97eeca823af35261a5bd613dc03 644 PANTHER PTHR23076 1 600 0.0 T 22-04-2016 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 SMART SM00870 5 323 2.0E-138 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 PIRSF PIRSF001220 1 334 2.5E-99 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 Gene3D G3DSA:3.40.50.1170 5 196 6.4E-76 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 SUPERFAMILY SSF53774 3 335 6.15E-111 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 Gene3D G3DSA:3.40.50.40 211 335 1.2E-51 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 PANTHER PTHR11707:SF31 1 336 3.7E-267 T 22-04-2016 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.8E-63 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 7.0E-128 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.0E-16 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.0E-16 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.0E-16 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 PANTHER PTHR11707 1 336 3.7E-267 T 22-04-2016 YPO2161 3d5fe570a9d93358321e34f76f3d8de5 338 PIRSF PIRSF500176 2 332 3.3E-113 T 22-04-2016 YPCD1.65 e4185e356d44ffdcf252cd069974b02b 102 Pfam PF03616 Sodium/glutamate symporter 1 102 2.6E-40 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YPCD1.65 e4185e356d44ffdcf252cd069974b02b 102 PANTHER PTHR36178:SF1 1 102 2.2E-43 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YPCD1.65 e4185e356d44ffdcf252cd069974b02b 102 PANTHER PTHR36178 1 102 2.2E-43 T 22-04-2016 YPO1638 d3af22d892a2b4495d4cd9367376a029 371 Gene3D G3DSA:2.30.30.280 214 281 2.3E-33 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 YPO1638 d3af22d892a2b4495d4cd9367376a029 371 PANTHER PTHR11933 1 366 5.0E-220 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 YPO1638 d3af22d892a2b4495d4cd9367376a029 371 Pfam PF03054 tRNA methyl transferase 7 361 1.5E-142 T 22-04-2016 YPO1638 d3af22d892a2b4495d4cd9367376a029 371 Gene3D G3DSA:3.40.50.620 4 212 1.6E-97 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1638 d3af22d892a2b4495d4cd9367376a029 371 Gene3D G3DSA:2.40.30.10 283 366 3.1E-33 T 22-04-2016 YPO1638 d3af22d892a2b4495d4cd9367376a029 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 6.1E-156 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 YPO1638 d3af22d892a2b4495d4cd9367376a029 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.894 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 YPO1638 d3af22d892a2b4495d4cd9367376a029 371 PANTHER PTHR11933:SF10 1 366 5.0E-220 T 22-04-2016 YPO1638 d3af22d892a2b4495d4cd9367376a029 371 SUPERFAMILY SSF52402 5 245 2.43E-56 T 22-04-2016 YPO0321 85198453c298287723a4ea234f107d23 359 Gene3D G3DSA:2.40.37.10 212 358 2.0E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPO0321 85198453c298287723a4ea234f107d23 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.6E-72 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PANTHER PTHR30511:SF4 1 359 1.3E-250 T 22-04-2016 YPO0321 85198453c298287723a4ea234f107d23 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 Gene3D G3DSA:3.20.20.10 11 211 1.3E-74 T 22-04-2016 IPR029066 PLP-binding barrel YPO0321 85198453c298287723a4ea234f107d23 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.3E-35 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PRINTS PR00992 Alanine racemase signature 266 281 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PRINTS PR00992 Alanine racemase signature 287 304 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PRINTS PR00992 Alanine racemase signature 249 264 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PRINTS PR00992 Alanine racemase signature 339 352 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PRINTS PR00992 Alanine racemase signature 26 42 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PRINTS PR00992 Alanine racemase signature 192 219 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PRINTS PR00992 Alanine racemase signature 155 166 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PRINTS PR00992 Alanine racemase signature 60 78 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PRINTS PR00992 Alanine racemase signature 120 132 1.2E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 SUPERFAMILY SSF51419 8 234 8.29E-72 T 22-04-2016 IPR029066 PLP-binding barrel YPO0321 85198453c298287723a4ea234f107d23 359 SUPERFAMILY SSF50621 225 358 1.15E-42 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPO0321 85198453c298287723a4ea234f107d23 359 Hamap MF_01201 Alanine racemase. 1 357 34.212 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 SMART SM01005 233 357 2.8E-59 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 TIGRFAM TIGR00492 alr: alanine racemase 3 357 4.3E-133 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0321 85198453c298287723a4ea234f107d23 359 PANTHER PTHR30511 1 359 1.3E-250 T 22-04-2016 YPO1035 abd950daa1d976a3f1b4ad6422498ee3 181 Hamap MF_01104 Protein Syd [syd]. 1 179 37.264 T 22-04-2016 IPR009948 Syd GO:0009898 YPO1035 abd950daa1d976a3f1b4ad6422498ee3 181 Pfam PF07348 Syd protein (SUKH-2) 5 177 9.6E-73 T 22-04-2016 IPR009948 Syd GO:0009898 YPO0383 acfc8b659300c09f361cc200128477d2 547 SUPERFAMILY SSF56645 65 291 6.48E-29 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 YPO0383 acfc8b659300c09f361cc200128477d2 547 PANTHER PTHR10909:SF289 33 467 5.3E-241 T 22-04-2016 YPO0383 acfc8b659300c09f361cc200128477d2 547 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 185 283 6.8E-13 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 YPO0383 acfc8b659300c09f361cc200128477d2 547 Gene3D G3DSA:1.20.140.10 285 452 8.7E-40 T 22-04-2016 YPO0383 acfc8b659300c09f361cc200128477d2 547 SUPERFAMILY SSF47203 291 451 6.93E-39 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPO0383 acfc8b659300c09f361cc200128477d2 547 Gene3D G3DSA:2.40.110.10 185 284 5.2E-19 T 22-04-2016 YPO0383 acfc8b659300c09f361cc200128477d2 547 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 187 199 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 YPO0383 acfc8b659300c09f361cc200128477d2 547 PANTHER PTHR10909 33 467 5.3E-241 T 22-04-2016 YPO0383 acfc8b659300c09f361cc200128477d2 547 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 293 446 5.2E-29 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPO1470 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Gene3D G3DSA:2.30.110.20 1 160 8.2E-33 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO1470 9e361dca00c5ea66c6b5fec0e8ad25ca 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.7E-49 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO1470 9e361dca00c5ea66c6b5fec0e8ad25ca 163 PANTHER PTHR34319:SF2 1 163 7.3E-144 T 22-04-2016 YPO1470 9e361dca00c5ea66c6b5fec0e8ad25ca 163 SUPERFAMILY SSF141452 2 160 3.92E-43 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO1470 9e361dca00c5ea66c6b5fec0e8ad25ca 163 PANTHER PTHR34319 1 163 7.3E-144 T 22-04-2016 YPO1470 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.8E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO0973 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Gene3D G3DSA:2.30.110.20 1 160 8.2E-33 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO0973 9e361dca00c5ea66c6b5fec0e8ad25ca 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.7E-49 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO0973 9e361dca00c5ea66c6b5fec0e8ad25ca 163 PANTHER PTHR34319:SF2 1 163 7.3E-144 T 22-04-2016 YPO0973 9e361dca00c5ea66c6b5fec0e8ad25ca 163 SUPERFAMILY SSF141452 2 160 3.92E-43 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO0973 9e361dca00c5ea66c6b5fec0e8ad25ca 163 PANTHER PTHR34319 1 163 7.3E-144 T 22-04-2016 YPO0973 9e361dca00c5ea66c6b5fec0e8ad25ca 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.8E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO3115 fc22de328af7ed83b27f648faf91f378 261 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 5 260 1.2E-146 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 YPO3115 fc22de328af7ed83b27f648faf91f378 261 Pfam PF00483 Nucleotidyl transferase 6 215 5.8E-19 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPO3115 fc22de328af7ed83b27f648faf91f378 261 PANTHER PTHR22572 6 261 1.8E-184 T 22-04-2016 YPO3115 fc22de328af7ed83b27f648faf91f378 261 PANTHER PTHR22572:SF16 6 261 1.8E-184 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 YPO3115 fc22de328af7ed83b27f648faf91f378 261 Gene3D G3DSA:3.90.550.10 5 260 4.7E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3115 fc22de328af7ed83b27f648faf91f378 261 SUPERFAMILY SSF53448 5 261 3.13E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1092 e0fcf45f92b9713a075f527a438b8aec 298 Pfam PF12835 Integrase 105 253 7.9E-62 T 22-04-2016 IPR024456 Integrase catalytic domain, putative YPO1092 e0fcf45f92b9713a075f527a438b8aec 298 Gene3D G3DSA:1.10.443.10 122 256 1.4E-7 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO1092 e0fcf45f92b9713a075f527a438b8aec 298 Pfam PF12834 Phage integrase, N-terminal 4 94 9.5E-41 T 22-04-2016 IPR024457 Putative integrase, N-terminal YPO1092 e0fcf45f92b9713a075f527a438b8aec 298 Gene3D G3DSA:1.10.150.130 12 94 3.2E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPO1092 e0fcf45f92b9713a075f527a438b8aec 298 SUPERFAMILY SSF56349 17 257 1.12E-17 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPO1583 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1583 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO1583 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2799 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2799 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2799 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2447 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2447 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2447 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2783 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2783 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2783 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1561 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1561 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO1561 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2194 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2194 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2194 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2862 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2862 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2862 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2942 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2942 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2942 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1727 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1727 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO1727 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2170 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2170 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2170 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1621 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1621 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO1621 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2136 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2136 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2136 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO0011 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO0011 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO0011 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1988 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1988 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO1988 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2656 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2656 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2656 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1589 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1589 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO1589 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO3875 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO3875 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO3875 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2104 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2104 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2104 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1493 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO1493 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO1493 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2571 eb5ec01e56692f7f59b220c0888f3f17 402 Pfam PF00872 Transposase, Mutator family 12 377 9.0E-115 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO2571 eb5ec01e56692f7f59b220c0888f3f17 402 PANTHER PTHR33217 1 399 5.4E-192 T 22-04-2016 YPO2571 eb5ec01e56692f7f59b220c0888f3f17 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 YPO3953 86cf76bfffc5aa017a309195a446556e 167 PRINTS PR01100 Shikimate kinase family signature 6 21 5.6E-6 T 22-04-2016 YPO3953 86cf76bfffc5aa017a309195a446556e 167 PRINTS PR01100 Shikimate kinase family signature 100 117 5.6E-6 T 22-04-2016 YPO3953 86cf76bfffc5aa017a309195a446556e 167 Gene3D G3DSA:3.40.50.300 2 166 3.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3953 86cf76bfffc5aa017a309195a446556e 167 PANTHER PTHR11603 1 167 2.0E-86 T 22-04-2016 YPO3953 86cf76bfffc5aa017a309195a446556e 167 Pfam PF01202 Shikimate kinase 12 165 1.0E-14 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO3953 86cf76bfffc5aa017a309195a446556e 167 SUPERFAMILY SSF52540 3 165 2.47E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3953 86cf76bfffc5aa017a309195a446556e 167 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 163 3.6E-65 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 YPO1664 3a01c344a29071867ea5f0d70044dca8 295 PANTHER PTHR30433:SF4 1 289 7.0E-195 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YPO1664 3a01c344a29071867ea5f0d70044dca8 295 PANTHER PTHR30433 1 289 7.0E-195 T 22-04-2016 YPO1664 3a01c344a29071867ea5f0d70044dca8 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 239 3.0E-11 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YPO1664 3a01c344a29071867ea5f0d70044dca8 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site YPO1664 3a01c344a29071867ea5f0d70044dca8 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 5.3E-119 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.40.50.670 718 786 3.6E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.40.50.670 404 550 3.6E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.30.565.10 15 218 4.0E-93 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF55874 4 220 1.44E-77 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 Gene3D G3DSA:3.30.230.10 220 392 8.4E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 109.687 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF01751 Toprim domain 419 531 5.1E-18 T 22-04-2016 IPR006171 Toprim domain YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF54211 221 392 3.79E-62 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF56719 730 795 1.12E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 SUPERFAMILY SSF56719 394 560 1.12E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 SMART SM00433 35 797 3.8E-281 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PANTHER PTHR10169 1 553 0.0 T 22-04-2016 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 PANTHER PTHR10169 722 804 0.0 T 22-04-2016 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 SMART SM00387 31 175 6.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF00204 DNA gyrase B 221 390 3.0E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO4094 bfb0adbecd0385d3efae1ff0df1041a2 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 2.0E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO3377 a8086cd4f4824af07e2ec76f949ecd81 545 Pfam PF06418 CTP synthase N-terminus 5 266 6.7E-126 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YPO3377 a8086cd4f4824af07e2ec76f949ecd81 545 SUPERFAMILY SSF52540 3 269 4.91E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3377 a8086cd4f4824af07e2ec76f949ecd81 545 SUPERFAMILY SSF52317 289 541 2.37E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO3377 a8086cd4f4824af07e2ec76f949ecd81 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 7.5E-264 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YPO3377 a8086cd4f4824af07e2ec76f949ecd81 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.9E-63 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPO3377 a8086cd4f4824af07e2ec76f949ecd81 545 Gene3D G3DSA:3.40.50.300 1 280 6.8E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3377 a8086cd4f4824af07e2ec76f949ecd81 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.207 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YPO3377 a8086cd4f4824af07e2ec76f949ecd81 545 Gene3D G3DSA:3.40.50.880 289 541 3.2E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 PANTHER PTHR18934 57 682 0.0 T 22-04-2016 YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 PANTHER PTHR18934 719 847 0.0 T 22-04-2016 YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 Pfam PF00271 Helicase conserved C-terminal domain 267 384 9.0E-11 T 22-04-2016 IPR001650 Helicase, C-terminal YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 Pfam PF00270 DEAD/DEAH box helicase 67 214 7.1E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 PANTHER PTHR18934:SF109 57 682 0.0 T 22-04-2016 YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 PANTHER PTHR18934:SF109 719 847 0.0 T 22-04-2016 YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 SMART SM00490 286 385 2.1E-15 T 22-04-2016 IPR001650 Helicase, C-terminal YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 SMART SM00847 445 539 5.0E-36 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 Gene3D G3DSA:3.40.50.300 253 397 1.5E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 SUPERFAMILY SSF52540 55 581 1.01E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 Pfam PF04408 Helicase associated domain (HA2) 447 537 3.2E-17 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 SMART SM00382 73 365 4.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 Gene3D G3DSA:3.40.50.300 58 214 6.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 SMART SM00487 56 240 2.5E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 1 1277 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 Pfam PF11898 Domain of unknown function (DUF3418) 693 1276 4.4E-235 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal YPO2322 0f1b306f6fe3c3f64a756582c2bfaa0b 1280 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 562 678 8.8E-17 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 SUPERFAMILY SSF51735 316 495 3.78E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 2.9E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.264 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 494 1.3E-59 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 7.9E-27 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 PANTHER PTHR23309:SF18 8 715 0.0 T 22-04-2016 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 SUPERFAMILY SSF48179 622 714 1.62E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 Gene3D G3DSA:3.40.50.720 311 497 5.0E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 SUPERFAMILY SSF48179 495 611 7.82E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 Gene3D G3DSA:3.90.226.10 4 206 1.3E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 Gene3D G3DSA:1.10.1040.10 632 711 9.2E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 SUPERFAMILY SSF52096 2 303 3.7E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 Gene3D G3DSA:1.10.1040.10 498 592 1.7E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO3766 d4c966b52c51418b7bf1c499cdac892b 729 PANTHER PTHR23309 8 715 0.0 T 22-04-2016 YPO3378 c87970fe9fc8b6c798e0226ef8038478 280 PANTHER PTHR30522:SF0 6 280 1.8E-136 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG YPO3378 c87970fe9fc8b6c798e0226ef8038478 280 TIGRFAM TIGR00444 mazG: MazG family protein 21 274 1.4E-106 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG YPO3378 c87970fe9fc8b6c798e0226ef8038478 280 Gene3D G3DSA:1.10.287.1080 20 83 1.6E-7 T 22-04-2016 YPO3378 c87970fe9fc8b6c798e0226ef8038478 280 Gene3D G3DSA:1.10.287.1080 149 236 2.2E-11 T 22-04-2016 YPO3378 c87970fe9fc8b6c798e0226ef8038478 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 185 246 9.4E-7 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPO3378 c87970fe9fc8b6c798e0226ef8038478 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 38 111 2.8E-28 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPO3378 c87970fe9fc8b6c798e0226ef8038478 280 PANTHER PTHR30522 6 280 1.8E-136 T 22-04-2016 YPO3378 c87970fe9fc8b6c798e0226ef8038478 280 SUPERFAMILY SSF101386 14 116 2.24E-25 T 22-04-2016 YPO3378 c87970fe9fc8b6c798e0226ef8038478 280 SUPERFAMILY SSF101386 153 253 7.29E-23 T 22-04-2016 YPO1768 0c39a344e401feafc8a444d1ad3ec041 455 PANTHER PTHR11662:SF267 9 454 0.0 T 22-04-2016 YPO1768 0c39a344e401feafc8a444d1ad3ec041 455 Pfam PF11700 Vacuole effluxer Atg22 like 399 449 6.0E-6 T 22-04-2016 IPR024671 Autophagy-related protein 22-like YPO1768 0c39a344e401feafc8a444d1ad3ec041 455 PANTHER PTHR11662 9 454 0.0 T 22-04-2016 YPO1768 0c39a344e401feafc8a444d1ad3ec041 455 Gene3D G3DSA:1.20.1250.20 32 232 2.5E-42 T 22-04-2016 YPO1768 0c39a344e401feafc8a444d1ad3ec041 455 Gene3D G3DSA:1.20.1250.20 265 444 1.4E-20 T 22-04-2016 YPO1768 0c39a344e401feafc8a444d1ad3ec041 455 Pfam PF07690 Major Facilitator Superfamily 40 395 4.3E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1768 0c39a344e401feafc8a444d1ad3ec041 455 SUPERFAMILY SSF103473 22 447 3.79E-80 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1768 0c39a344e401feafc8a444d1ad3ec041 455 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 28 436 6.6E-237 T 22-04-2016 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 Gene3D G3DSA:3.50.30.10 301 415 1.2E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 SUPERFAMILY SSF47831 202 309 8.24E-26 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 Gene3D G3DSA:1.10.274.10 198 300 2.2E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 SUPERFAMILY SSF51621 420 714 6.54E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 6.1E-16 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 SMART SM00065 17 164 2.6E-26 T 22-04-2016 IPR003018 GAF domain GO:0005515 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 Pfam PF01590 GAF domain 18 151 2.9E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 Gene3D G3DSA:3.20.20.60 420 736 1.8E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 PANTHER PTHR22931 1 716 0.0 T 22-04-2016 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 9.2E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 730 1.3E-130 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.6E-25 T 22-04-2016 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 7.6E-25 T 22-04-2016 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 7.6E-25 T 22-04-2016 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 7.6E-25 T 22-04-2016 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 419 707 6.0E-103 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 Gene3D G3DSA:3.30.450.40 2 159 1.3E-46 T 22-04-2016 IPR029016 GAF domain-like YPO0785 e7d096438b66f103211ed128b9a01ef7 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 SUPERFAMILY SSF52009 293 413 3.66E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO0785 e7d096438b66f103211ed128b9a01ef7 748 SUPERFAMILY SSF55781 4 159 1.74E-30 T 22-04-2016 IPR029016 GAF domain-like YPO0785 e7d096438b66f103211ed128b9a01ef7 748 PANTHER PTHR22931:SF23 1 716 0.0 T 22-04-2016 YPO3991 1c44f2f1110680de2520978ea46b8363 499 SUPERFAMILY SSF63411 342 458 8.56E-7 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPO3991 1c44f2f1110680de2520978ea46b8363 499 PANTHER PTHR11851 1 486 6.5E-90 T 22-04-2016 YPO3991 1c44f2f1110680de2520978ea46b8363 499 Pfam PF00675 Insulinase (Peptidase family M16) 51 173 5.6E-11 T 22-04-2016 IPR011765 Peptidase M16, N-terminal YPO3991 1c44f2f1110680de2520978ea46b8363 499 PANTHER PTHR11851:SF136 1 486 6.5E-90 T 22-04-2016 YPO3991 1c44f2f1110680de2520978ea46b8363 499 Pfam PF05193 Peptidase M16 inactive domain 201 378 6.9E-17 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YPO3991 1c44f2f1110680de2520978ea46b8363 499 Gene3D G3DSA:3.30.830.10 34 247 2.6E-24 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPO3991 1c44f2f1110680de2520978ea46b8363 499 SUPERFAMILY SSF63411 29 240 2.62E-27 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPO2315 3137afbf4b55322eaeb6880c8f056c89 192 Gene3D G3DSA:2.40.128.110 23 190 1.5E-59 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPO2315 3137afbf4b55322eaeb6880c8f056c89 192 PANTHER PTHR34406:SF1 1 191 1.8E-64 T 22-04-2016 YPO2315 3137afbf4b55322eaeb6880c8f056c89 192 SUPERFAMILY SSF101874 23 189 7.32E-56 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPO2315 3137afbf4b55322eaeb6880c8f056c89 192 PANTHER PTHR34406 1 191 1.8E-64 T 22-04-2016 YPO2315 3137afbf4b55322eaeb6880c8f056c89 192 SMART SM00867 25 189 1.9E-70 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPO2315 3137afbf4b55322eaeb6880c8f056c89 192 Pfam PF04264 YceI-like domain 26 187 2.5E-40 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPO2315 3137afbf4b55322eaeb6880c8f056c89 192 Hamap MF_00780 Protein YceI [yceI]. 2 192 45.01 T 22-04-2016 IPR023480 Uncharacterised protein family UPF0312/YceI YPO2593 ff2129f2737067172cab60b6b7402b5f 205 Gene3D G3DSA:1.10.10.10 143 203 1.7E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2593 ff2129f2737067172cab60b6b7402b5f 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 4.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2593 ff2129f2737067172cab60b6b7402b5f 205 SUPERFAMILY SSF46894 141 202 2.86E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO2593 ff2129f2737067172cab60b6b7402b5f 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.0E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2593 ff2129f2737067172cab60b6b7402b5f 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.0E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2593 ff2129f2737067172cab60b6b7402b5f 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.0E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2593 ff2129f2737067172cab60b6b7402b5f 205 SMART SM00421 145 202 4.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO3622 c17d97aa4068eac2f9cb1c3f82556048 233 Gene3D G3DSA:3.20.20.70 7 226 7.0E-52 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3622 c17d97aa4068eac2f9cb1c3f82556048 233 PIRSF PIRSF001357 3 229 1.2E-61 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO3622 c17d97aa4068eac2f9cb1c3f82556048 233 SMART SM01133 9 225 7.0E-52 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPO3622 c17d97aa4068eac2f9cb1c3f82556048 233 SUPERFAMILY SSF51569 6 226 5.76E-52 T 22-04-2016 YPO3622 c17d97aa4068eac2f9cb1c3f82556048 233 PANTHER PTHR10889 1 230 3.1E-83 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO3622 c17d97aa4068eac2f9cb1c3f82556048 233 Pfam PF01791 DeoC/LacD family aldolase 47 205 3.9E-7 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPO3622 c17d97aa4068eac2f9cb1c3f82556048 233 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 10 221 2.6E-45 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO1210 f5314017cd263a3846e1eb076bf70c02 397 PIRSF PIRSF006728 1 385 8.7E-114 T 22-04-2016 IPR008135 Competence-induced protein CinA YPO1210 f5314017cd263a3846e1eb076bf70c02 397 Gene3D G3DSA:3.40.980.10 2 197 2.2E-30 T 22-04-2016 IPR001453 MoaB/Mog domain YPO1210 f5314017cd263a3846e1eb076bf70c02 397 SMART SM00852 5 172 1.4E-34 T 22-04-2016 IPR001453 MoaB/Mog domain YPO1210 f5314017cd263a3846e1eb076bf70c02 397 PANTHER PTHR13939 2 387 1.1E-216 T 22-04-2016 YPO1210 f5314017cd263a3846e1eb076bf70c02 397 SUPERFAMILY SSF53218 1 203 3.01E-37 T 22-04-2016 IPR001453 MoaB/Mog domain YPO1210 f5314017cd263a3846e1eb076bf70c02 397 PANTHER PTHR13939:SF3 2 387 1.1E-216 T 22-04-2016 YPO1210 f5314017cd263a3846e1eb076bf70c02 397 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 396 4.0E-117 T 22-04-2016 IPR008135 Competence-induced protein CinA YPO1210 f5314017cd263a3846e1eb076bf70c02 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 2.7E-31 T 22-04-2016 IPR001453 MoaB/Mog domain YPO1210 f5314017cd263a3846e1eb076bf70c02 397 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 397 114.799 T 22-04-2016 IPR008135 Competence-induced protein CinA YPO1210 f5314017cd263a3846e1eb076bf70c02 397 Pfam PF00994 Probable molybdopterin binding domain 6 170 3.1E-32 T 22-04-2016 IPR001453 MoaB/Mog domain YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 SUPERFAMILY SSF46785 2 109 3.97E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 Pfam PF03466 LysR substrate binding domain 89 289 7.1E-48 T 22-04-2016 IPR005119 LysR, substrate-binding YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 Gene3D G3DSA:3.40.190.10 225 254 9.4E-4 T 22-04-2016 YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 PANTHER PTHR30126:SF36 2 289 1.9E-202 T 22-04-2016 YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.2E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 PANTHER PTHR30126 2 289 1.9E-202 T 22-04-2016 YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 Gene3D G3DSA:1.10.10.10 2 82 8.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 SUPERFAMILY SSF53850 89 289 3.75E-47 T 22-04-2016 YPO1308 19af5fc749ebc59fe9b85b803d69e57a 290 Gene3D G3DSA:3.40.190.10 89 224 3.6E-34 T 22-04-2016 YPO3532 68bb4c8a2d26d86fd48bb8d5d954fd85 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 2.5E-22 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YPO3532 68bb4c8a2d26d86fd48bb8d5d954fd85 206 Gene3D G3DSA:3.10.50.40 92 205 4.6E-48 T 22-04-2016 YPO3532 68bb4c8a2d26d86fd48bb8d5d954fd85 206 PANTHER PTHR10516:SF320 86 205 3.5E-66 T 22-04-2016 YPO3532 68bb4c8a2d26d86fd48bb8d5d954fd85 206 PANTHER PTHR10516:SF320 14 67 3.5E-66 T 22-04-2016 YPO3532 68bb4c8a2d26d86fd48bb8d5d954fd85 206 Gene3D G3DSA:1.10.287.460 2 91 1.0E-23 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YPO3532 68bb4c8a2d26d86fd48bb8d5d954fd85 206 PANTHER PTHR10516 86 205 3.5E-66 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO3532 68bb4c8a2d26d86fd48bb8d5d954fd85 206 PANTHER PTHR10516 14 67 3.5E-66 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO3532 68bb4c8a2d26d86fd48bb8d5d954fd85 206 SUPERFAMILY SSF54534 8 205 2.72E-54 T 22-04-2016 YPO3532 68bb4c8a2d26d86fd48bb8d5d954fd85 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 1.3E-26 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 PIRSF PIRSF006160 1 162 5.0E-67 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 SUPERFAMILY SSF63411 4 162 1.19E-67 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 2.0E-84 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 PANTHER PTHR35799 2 169 1.1E-108 T 22-04-2016 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.725 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 Gene3D G3DSA:3.30.1360.80 1 170 4.9E-76 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO3300 a13cdff49cc1c2efd247d8f22a1b50f9 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 2.6E-62 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YPO1536 13e3d23d312095e0df3daa42b767c761 359 Gene3D G3DSA:3.40.50.1980 68 186 8.1E-24 T 22-04-2016 YPO1536 13e3d23d312095e0df3daa42b767c761 359 Gene3D G3DSA:3.40.50.1980 187 344 2.1E-15 T 22-04-2016 YPO1536 13e3d23d312095e0df3daa42b767c761 359 PANTHER PTHR30532 13 353 4.0E-144 T 22-04-2016 YPO1536 13e3d23d312095e0df3daa42b767c761 359 SUPERFAMILY SSF53807 61 342 9.81E-47 T 22-04-2016 YPO1536 13e3d23d312095e0df3daa42b767c761 359 Pfam PF01497 Periplasmic binding protein 72 311 3.8E-21 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPO1536 13e3d23d312095e0df3daa42b767c761 359 PANTHER PTHR30532:SF7 13 353 4.0E-144 T 22-04-2016 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Gene3D G3DSA:1.10.1240.10 655 741 1.9E-38 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 SUPERFAMILY SSF47644 657 743 5.36E-28 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 TIGRFAM TIGR02082 metH: methionine synthase 18 1196 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 SUPERFAMILY SSF56507 907 1230 2.22E-133 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 PANTHER PTHR21091 1 407 6.2E-165 T 22-04-2016 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 SUPERFAMILY SSF52242 748 898 5.1E-46 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 SUPERFAMILY SSF82282 12 404 9.68E-115 T 22-04-2016 IPR003726 Homocysteine-binding domain YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Pfam PF02310 B12 binding domain 752 844 9.4E-19 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Pfam PF02574 Homocysteine S-methyltransferase 22 330 1.0E-90 T 22-04-2016 IPR003726 Homocysteine-binding domain YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 SMART SM01018 661 744 5.7E-43 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Gene3D G3DSA:3.40.50.280 749 899 1.1E-64 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Gene3D G3DSA:3.10.196.10 961 1230 6.3E-115 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 SUPERFAMILY SSF51717 361 635 1.01E-87 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Gene3D G3DSA:3.20.20.330 7 368 1.6E-124 T 22-04-2016 IPR003726 Homocysteine-binding domain YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Gene3D G3DSA:3.20.20.20 369 641 1.1E-113 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Pfam PF00809 Pterin binding enzyme 365 603 2.1E-61 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 PANTHER PTHR21091:SF111 1 407 6.2E-165 T 22-04-2016 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 942 1212 8.8E-124 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 PIRSF PIRSF000381 6 1199 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YPO3722 8c0f8dbe7afff4e74514a9c6b01dad7c 1231 Pfam PF02607 B12 binding domain 664 737 1.6E-23 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPO0309 d109126121d6d3a88f7304528fad3861 1238 Gene3D G3DSA:2.40.128.130 917 1238 2.1E-52 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0309 d109126121d6d3a88f7304528fad3861 1238 PANTHER PTHR35037 1 1238 0.0 T 22-04-2016 YPO0309 d109126121d6d3a88f7304528fad3861 1238 Pfam PF03797 Autotransporter beta-domain 958 1220 2.1E-37 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0309 d109126121d6d3a88f7304528fad3861 1238 SMART SM00869 959 1223 9.4E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0309 d109126121d6d3a88f7304528fad3861 1238 Gene3D G3DSA:2.160.20.20 640 916 9.3E-15 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO0309 d109126121d6d3a88f7304528fad3861 1238 Gene3D G3DSA:2.160.20.20 523 591 9.3E-15 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO0309 d109126121d6d3a88f7304528fad3861 1238 Gene3D G3DSA:2.160.20.20 452 485 9.3E-15 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO0309 d109126121d6d3a88f7304528fad3861 1238 Gene3D G3DSA:2.160.20.20 357 405 9.3E-15 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO0309 d109126121d6d3a88f7304528fad3861 1238 Gene3D G3DSA:2.160.20.20 180 310 9.3E-15 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO0309 d109126121d6d3a88f7304528fad3861 1238 SUPERFAMILY SSF51126 377 904 2.42E-31 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO0309 d109126121d6d3a88f7304528fad3861 1238 SUPERFAMILY SSF103515 921 1238 1.57E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0309 d109126121d6d3a88f7304528fad3861 1238 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 791 1238 2.7E-78 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO0309 d109126121d6d3a88f7304528fad3861 1238 PANTHER PTHR35037:SF1 1 1238 0.0 T 22-04-2016 YPO1816 3e50fce6692f5ccf2d3d616ccafd6d1f 319 Gene3D G3DSA:3.40.1190.20 1 309 2.6E-69 T 22-04-2016 IPR029056 Ribokinase-like YPO1816 3e50fce6692f5ccf2d3d616ccafd6d1f 319 Pfam PF00294 pfkB family carbohydrate kinase 1 294 3.6E-52 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPO1816 3e50fce6692f5ccf2d3d616ccafd6d1f 319 PANTHER PTHR10584:SF166 1 292 1.5E-63 T 22-04-2016 YPO1816 3e50fce6692f5ccf2d3d616ccafd6d1f 319 SUPERFAMILY SSF53613 1 302 7.33E-69 T 22-04-2016 IPR029056 Ribokinase-like YPO1816 3e50fce6692f5ccf2d3d616ccafd6d1f 319 PANTHER PTHR10584 1 292 1.5E-63 T 22-04-2016 YPO0492 04bde8608584e5d0619000c5f6eaee0e 272 PANTHER PTHR11727 1 267 1.4E-98 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPO0492 04bde8608584e5d0619000c5f6eaee0e 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.96 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YPO0492 04bde8608584e5d0619000c5f6eaee0e 272 Gene3D G3DSA:3.40.50.150 6 197 4.3E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0492 04bde8608584e5d0619000c5f6eaee0e 272 SMART SM00650 25 198 1.1E-82 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 YPO0492 04bde8608584e5d0619000c5f6eaee0e 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 264 3.3E-79 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPO0492 04bde8608584e5d0619000c5f6eaee0e 272 Gene3D G3DSA:1.10.8.100 201 265 8.0E-24 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like YPO0492 04bde8608584e5d0619000c5f6eaee0e 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 9.6E-89 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YPO0492 04bde8608584e5d0619000c5f6eaee0e 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 YPO0492 04bde8608584e5d0619000c5f6eaee0e 272 SUPERFAMILY SSF53335 17 265 5.1E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2172 36fafdf9d1ab30541e5d0e0d34a785e0 154 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 130 29.041 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 YPO2172 36fafdf9d1ab30541e5d0e0d34a785e0 154 PANTHER PTHR33747:SF1 2 154 2.3E-38 T 22-04-2016 YPO2172 36fafdf9d1ab30541e5d0e0d34a785e0 154 Pfam PF02810 SEC-C motif 136 154 4.8E-8 T 22-04-2016 IPR004027 SEC-C motif YPO2172 36fafdf9d1ab30541e5d0e0d34a785e0 154 Pfam PF02810 SEC-C motif 2 19 2.9E-6 T 22-04-2016 IPR004027 SEC-C motif YPO2172 36fafdf9d1ab30541e5d0e0d34a785e0 154 SUPERFAMILY SSF54427 25 130 6.0E-35 T 22-04-2016 IPR032710 NTF2-like domain YPO2172 36fafdf9d1ab30541e5d0e0d34a785e0 154 Gene3D G3DSA:3.10.450.50 3 154 1.4E-52 T 22-04-2016 IPR032710 NTF2-like domain YPO2172 36fafdf9d1ab30541e5d0e0d34a785e0 154 SUPERFAMILY SSF103642 134 153 1.24E-6 T 22-04-2016 YPO2172 36fafdf9d1ab30541e5d0e0d34a785e0 154 PANTHER PTHR33747 2 154 2.3E-38 T 22-04-2016 YPO3541 482d2f6d56a1da4b60b65a3c075fb749 223 PANTHER PTHR10655 151 223 2.5E-14 T 22-04-2016 YPO3541 482d2f6d56a1da4b60b65a3c075fb749 223 PANTHER PTHR10655 1 125 2.5E-14 T 22-04-2016 YPO3541 482d2f6d56a1da4b60b65a3c075fb749 223 SUPERFAMILY SSF53474 2 223 1.09E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3541 482d2f6d56a1da4b60b65a3c075fb749 223 Gene3D G3DSA:3.40.50.1820 2 223 2.1E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3541 482d2f6d56a1da4b60b65a3c075fb749 223 Pfam PF00326 Prolyl oligopeptidase family 62 208 2.4E-13 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 YPO3541 482d2f6d56a1da4b60b65a3c075fb749 223 PANTHER PTHR10655:SF33 151 223 2.5E-14 T 22-04-2016 YPO3541 482d2f6d56a1da4b60b65a3c075fb749 223 PANTHER PTHR10655:SF33 1 125 2.5E-14 T 22-04-2016 YPO3295 dbd4d14c4f862596aa706247fcd02bea 82 PANTHER PTHR12919 1 78 6.1E-41 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3295 dbd4d14c4f862596aa706247fcd02bea 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.711 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3295 dbd4d14c4f862596aa706247fcd02bea 82 Gene3D G3DSA:3.30.1320.10 1 79 2.9E-32 T 22-04-2016 IPR023803 Ribosomal protein S16 domain YPO3295 dbd4d14c4f862596aa706247fcd02bea 82 SUPERFAMILY SSF54565 1 76 1.96E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain YPO3295 dbd4d14c4f862596aa706247fcd02bea 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.1E-28 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3295 dbd4d14c4f862596aa706247fcd02bea 82 Pfam PF00886 Ribosomal protein S16 8 68 3.1E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3295 dbd4d14c4f862596aa706247fcd02bea 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.1E-126 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:2.40.240.10 462 547 1.5E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PANTHER PTHR11451 7 247 7.9E-242 T 22-04-2016 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PANTHER PTHR11451 267 550 7.9E-242 T 22-04-2016 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:3.40.50.620 28 96 9.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:3.40.50.620 212 262 9.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 1.6E-62 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:3.90.800.10 101 209 1.1E-48 T 22-04-2016 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:1.10.1160.10 263 338 6.5E-39 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 SUPERFAMILY SSF52374 28 346 1.07E-101 T 22-04-2016 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Gene3D G3DSA:2.40.240.10 348 461 6.3E-49 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.715 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 SUPERFAMILY SSF50715 340 547 9.42E-80 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 550 0.0 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PANTHER PTHR11451:SF29 7 247 7.9E-242 T 22-04-2016 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PANTHER PTHR11451:SF29 267 550 7.9E-242 T 22-04-2016 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 3.9E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 3.9E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO2630 94a36eae4ee4b7a0bfe0b29ca4d63cd8 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 3.9E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO2963 6f5d0052d6bb3b5bd59b027575b5472d 282 Pfam PF13988 Protein of unknown function (DUF4225) 91 255 4.8E-57 T 22-04-2016 IPR025320 Protein of unknown function DUF4225 YPO1405 803546559cebb42a88a145358ddb2182 1485 Gene3D G3DSA:3.40.1140.10 1 226 2.7E-52 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 SUPERFAMILY SSF52540 21 55 3.55E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 847 878 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 981 1116 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 560 814 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 1426 1459 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 99 426 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 897 938 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 444 529 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937 1212 1248 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 1.0E-14 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 SUPERFAMILY SSF52540 22 224 3.36E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1405 803546559cebb42a88a145358ddb2182 1485 Pfam PF04310 MukB N-terminal 2 227 1.7E-123 T 22-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YPO1405 803546559cebb42a88a145358ddb2182 1485 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.061 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YPO1405 803546559cebb42a88a145358ddb2182 1485 Gene3D G3DSA:1.10.287.370 989 1111 4.0E-5 T 22-04-2016 IPR009053 Prefoldin YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 847 878 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 981 1116 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 560 814 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 1426 1459 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 99 426 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 897 938 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 444 529 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 PANTHER PTHR18937:SF201 1212 1248 0.0 T 22-04-2016 YPO1405 803546559cebb42a88a145358ddb2182 1485 SUPERFAMILY SSF52540 1268 1433 3.55E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1405 803546559cebb42a88a145358ddb2182 1485 Pfam PF16330 MukB hinge domain 645 810 1.7E-73 T 22-04-2016 IPR032520 MukB, hinge domain YPO1405 803546559cebb42a88a145358ddb2182 1485 PIRSF PIRSF005246 1 1483 0.0 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YPO0589 79d311f52ac88360636f25ab9d36402f 673 PANTHER PTHR22893:SF25 1 418 2.1E-250 T 22-04-2016 YPO0589 79d311f52ac88360636f25ab9d36402f 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 3.6E-12 T 22-04-2016 YPO0589 79d311f52ac88360636f25ab9d36402f 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.6E-12 T 22-04-2016 YPO0589 79d311f52ac88360636f25ab9d36402f 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 3.6E-12 T 22-04-2016 YPO0589 79d311f52ac88360636f25ab9d36402f 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 635 8.1E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0589 79d311f52ac88360636f25ab9d36402f 673 SUPERFAMILY SSF51971 334 519 4.71E-41 T 22-04-2016 YPO0589 79d311f52ac88360636f25ab9d36402f 673 Gene3D G3DSA:3.20.20.70 4 360 1.6E-122 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0589 79d311f52ac88360636f25ab9d36402f 673 SUPERFAMILY SSF51395 3 363 8.55E-112 T 22-04-2016 YPO0589 79d311f52ac88360636f25ab9d36402f 673 SUPERFAMILY SSF51905 461 519 7.62E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0589 79d311f52ac88360636f25ab9d36402f 673 SUPERFAMILY SSF51905 557 651 7.62E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0589 79d311f52ac88360636f25ab9d36402f 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 1.4E-5 T 22-04-2016 YPO0589 79d311f52ac88360636f25ab9d36402f 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 1.4E-5 T 22-04-2016 YPO0589 79d311f52ac88360636f25ab9d36402f 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 3.0E-90 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YPO0589 79d311f52ac88360636f25ab9d36402f 673 PANTHER PTHR22893 1 418 2.1E-250 T 22-04-2016 YPO0589 79d311f52ac88360636f25ab9d36402f 673 Gene3D G3DSA:3.50.50.60 361 464 7.2E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0589 79d311f52ac88360636f25ab9d36402f 673 Gene3D G3DSA:3.50.50.60 472 626 1.2E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 PANTHER PTHR10000 1 269 1.8E-163 T 22-04-2016 YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 4.6E-28 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 Gene3D G3DSA:3.40.50.1000 1 76 1.2E-59 T 22-04-2016 IPR023214 HAD-like domain YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 Gene3D G3DSA:3.40.50.1000 184 268 1.2E-59 T 22-04-2016 IPR023214 HAD-like domain YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 SUPERFAMILY SSF56784 1 268 1.63E-77 T 22-04-2016 IPR023214 HAD-like domain YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 PANTHER PTHR10000:SF29 1 269 1.8E-163 T 22-04-2016 YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 7.8E-69 T 22-04-2016 IPR023214 HAD-like domain YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.2E-67 T 22-04-2016 IPR000150 Cof protein GO:0016787 YPO4093 9ef378e7d509e929d8f955ba24d106e4 269 Gene3D G3DSA:3.30.1240.10 87 183 1.4E-39 T 22-04-2016 YPO3364 a71be42596138eedad6dad505875d81a 213 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 38 209 38.138 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 YPO3364 a71be42596138eedad6dad505875d81a 213 Gene3D G3DSA:3.40.50.300 18 212 3.3E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3364 a71be42596138eedad6dad505875d81a 213 Pfam PF01583 Adenylylsulphate kinase 39 191 1.8E-72 T 22-04-2016 YPO3364 a71be42596138eedad6dad505875d81a 213 SUPERFAMILY SSF52540 36 203 3.19E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3364 a71be42596138eedad6dad505875d81a 213 PANTHER PTHR11055 6 212 1.5E-139 T 22-04-2016 YPO3364 a71be42596138eedad6dad505875d81a 213 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 22 205 3.2E-86 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 SUPERFAMILY SSF51126 365 387 5.65E-34 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 SUPERFAMILY SSF51126 45 311 5.65E-34 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 SMART SM00912 54 174 1.8E-29 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 PANTHER PTHR32093 1 189 1.7E-59 T 22-04-2016 YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 Pfam PF05860 haemagglutination activity domain 52 166 6.0E-20 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 Gene3D G3DSA:2.160.20.10 45 324 9.7E-57 T 22-04-2016 IPR012334 Pectin lyase fold YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 72 155 1.4E-9 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 Pfam PF13332 Haemagluttinin repeat 635 774 9.0E-10 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 Pfam PF13332 Haemagluttinin repeat 939 1097 3.1E-6 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO2045 c2bd10a86157c4c4cf436b85927709c9 1576 Pfam PF13332 Haemagluttinin repeat 1217 1387 1.3E-16 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO3249 a30ff4738d4748137d4aef4d258646a4 430 Gene3D G3DSA:3.30.70.360 233 329 1.5E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO3249 a30ff4738d4748137d4aef4d258646a4 430 SUPERFAMILY SSF55031 220 334 1.03E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO3249 a30ff4738d4748137d4aef4d258646a4 430 Pfam PF01546 Peptidase family M20/M25/M40 84 412 1.9E-26 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPO3249 a30ff4738d4748137d4aef4d258646a4 430 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 83 92 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPO3249 a30ff4738d4748137d4aef4d258646a4 430 Gene3D G3DSA:3.40.630.10 358 414 2.6E-103 T 22-04-2016 YPO3249 a30ff4738d4748137d4aef4d258646a4 430 Gene3D G3DSA:3.40.630.10 15 232 2.6E-103 T 22-04-2016 YPO3249 a30ff4738d4748137d4aef4d258646a4 430 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 31 413 3.2E-115 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 YPO3249 a30ff4738d4748137d4aef4d258646a4 430 PANTHER PTHR32494 16 423 2.0E-181 T 22-04-2016 YPO3249 a30ff4738d4748137d4aef4d258646a4 430 PIRSF PIRSF001235 9 418 2.6E-130 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 YPO3249 a30ff4738d4748137d4aef4d258646a4 430 SUPERFAMILY SSF53187 343 413 1.46E-80 T 22-04-2016 YPO3249 a30ff4738d4748137d4aef4d258646a4 430 SUPERFAMILY SSF53187 18 230 1.46E-80 T 22-04-2016 YPO3249 a30ff4738d4748137d4aef4d258646a4 430 PANTHER PTHR32494:SF5 16 423 2.0E-181 T 22-04-2016 YPO3463 1115c75298b10bfc68d55043ca9521c1 378 Gene3D G3DSA:2.30.40.10 1 91 3.8E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO3463 1115c75298b10bfc68d55043ca9521c1 378 Gene3D G3DSA:2.30.40.10 316 364 2.7E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO3463 1115c75298b10bfc68d55043ca9521c1 378 PANTHER PTHR11271:SF43 1 378 7.4E-216 T 22-04-2016 YPO3463 1115c75298b10bfc68d55043ca9521c1 378 SUPERFAMILY SSF51338 2 49 9.5E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO3463 1115c75298b10bfc68d55043ca9521c1 378 SUPERFAMILY SSF51338 345 377 9.5E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO3463 1115c75298b10bfc68d55043ca9521c1 378 SUPERFAMILY SSF51556 50 345 1.13E-19 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO3463 1115c75298b10bfc68d55043ca9521c1 378 PANTHER PTHR11271 1 378 7.4E-216 T 22-04-2016 YPO3463 1115c75298b10bfc68d55043ca9521c1 378 Pfam PF07969 Amidohydrolase family 214 366 6.0E-11 T 22-04-2016 IPR013108 Amidohydrolase 3 YPO3463 1115c75298b10bfc68d55043ca9521c1 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 1.9E-151 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 YPO3463 1115c75298b10bfc68d55043ca9521c1 378 PIRSF PIRSF038971 1 378 1.6E-153 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 YPO1641 252d6e8fc421241b257bc9a14720b319 417 SMART SM01329 29 413 1.3E-180 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO1641 252d6e8fc421241b257bc9a14720b319 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 4.5E-116 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO1641 252d6e8fc421241b257bc9a14720b319 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 1.8E-234 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 YPO1641 252d6e8fc421241b257bc9a14720b319 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPO1641 252d6e8fc421241b257bc9a14720b319 417 SUPERFAMILY SSF53659 4 417 1.69E-148 T 22-04-2016 YPO1641 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835 189 256 1.1E-245 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPO1641 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835 276 417 1.1E-245 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPO1641 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835 1 165 1.1E-245 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPO1641 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835:SF52 189 256 1.1E-245 T 22-04-2016 YPO1641 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835:SF52 276 417 1.1E-245 T 22-04-2016 YPO1641 252d6e8fc421241b257bc9a14720b319 417 PANTHER PTHR11835:SF52 1 165 1.1E-245 T 22-04-2016 YPO1641 252d6e8fc421241b257bc9a14720b319 417 Gene3D G3DSA:3.40.718.10 12 417 1.9E-167 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO3619 8e39710391f531f3b43312754b90805d 313 PANTHER PTHR11019 9 309 6.9E-137 T 22-04-2016 YPO3619 8e39710391f531f3b43312754b90805d 313 Pfam PF02311 AraC-like ligand binding domain 55 182 2.1E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO3619 8e39710391f531f3b43312754b90805d 313 SUPERFAMILY SSF46689 202 252 1.7E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3619 8e39710391f531f3b43312754b90805d 313 Gene3D G3DSA:2.60.120.280 49 187 3.1E-18 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO3619 8e39710391f531f3b43312754b90805d 313 Gene3D G3DSA:1.10.10.60 255 306 5.2E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3619 8e39710391f531f3b43312754b90805d 313 PANTHER PTHR11019:SF81 9 309 6.9E-137 T 22-04-2016 YPO3619 8e39710391f531f3b43312754b90805d 313 SUPERFAMILY SSF46689 254 305 2.28E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3619 8e39710391f531f3b43312754b90805d 313 SMART SM00342 218 301 1.0E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO3619 8e39710391f531f3b43312754b90805d 313 Pfam PF12833 Helix-turn-helix domain 229 303 1.5E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO3619 8e39710391f531f3b43312754b90805d 313 SUPERFAMILY SSF51215 40 187 8.37E-22 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO3619 8e39710391f531f3b43312754b90805d 313 Gene3D G3DSA:1.10.10.60 204 254 5.1E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO4074 b9718535deba681b9ec73c180b068ccd 190 SUPERFAMILY SSF48150 4 186 9.42E-81 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPO4074 b9718535deba681b9ec73c180b068ccd 190 PANTHER PTHR30037:SF4 3 186 2.5E-117 T 22-04-2016 YPO4074 b9718535deba681b9ec73c180b068ccd 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 183 2.7E-83 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 YPO4074 b9718535deba681b9ec73c180b068ccd 190 Gene3D G3DSA:1.10.340.30 4 184 1.2E-84 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPO4074 b9718535deba681b9ec73c180b068ccd 190 Pfam PF03352 Methyladenine glycosylase 8 184 1.3E-78 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 YPO4074 b9718535deba681b9ec73c180b068ccd 190 PANTHER PTHR30037 3 186 2.5E-117 T 22-04-2016 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 Pfam PF02119 Flagellar P-ring protein 25 368 2.3E-134 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PANTHER PTHR30381:SF1 1 369 1.1E-239 T 22-04-2016 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PANTHER PTHR30381 1 369 1.1E-239 T 22-04-2016 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 40 55 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 25 40 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 165 183 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 86 105 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 125 143 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 191 209 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 255 267 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 60 75 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 PRINTS PR01010 Flagellar P-ring protein signature 108 125 6.2E-88 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1806 ac71fe9f4fc19cff72639c663339ed6c 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 369 38.471 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 PANTHER PTHR22939 1 451 4.8E-107 T 22-04-2016 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 SUPERFAMILY SSF50156 86 186 1.25E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 223 272 3.8E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 PANTHER PTHR22939:SF78 1 451 4.8E-107 T 22-04-2016 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 SMART SM00228 211 280 5.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 SMART SM00228 115 186 0.18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 Gene3D G3DSA:2.30.42.10 214 289 4.8E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 Gene3D G3DSA:2.30.42.10 96 182 3.7E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 SUPERFAMILY SSF50156 195 290 2.5E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 451 5.7E-160 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 YPO1051 51bce49ee2f68b63f908a0b2d474290a 451 Pfam PF02163 Peptidase family M50 10 439 4.7E-88 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 YPO3770 f98ebf5cd19b3e85e78731c56ef3101d 162 SMART SM00739 109 136 4.4E-4 T 22-04-2016 IPR005824 KOW YPO3770 f98ebf5cd19b3e85e78731c56ef3101d 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 47.842 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 YPO3770 f98ebf5cd19b3e85e78731c56ef3101d 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 7.0E-57 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 YPO3770 f98ebf5cd19b3e85e78731c56ef3101d 162 SMART SM00738 1 100 2.5E-30 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPO3770 f98ebf5cd19b3e85e78731c56ef3101d 162 SUPERFAMILY SSF82679 1 98 1.31E-24 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPO3770 f98ebf5cd19b3e85e78731c56ef3101d 162 PANTHER PTHR30265 1 161 2.6E-32 T 22-04-2016 YPO3770 f98ebf5cd19b3e85e78731c56ef3101d 162 PANTHER PTHR30265:SF3 1 161 2.6E-32 T 22-04-2016 YPO3770 f98ebf5cd19b3e85e78731c56ef3101d 162 Gene3D G3DSA:3.30.70.940 1 99 1.4E-14 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPO3770 f98ebf5cd19b3e85e78731c56ef3101d 162 Pfam PF02357 Transcription termination factor nusG 2 95 1.3E-15 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YPO1611 c8be240148e8cce40a78344b74191386 117 PRINTS PR00332 Histidine triad family signature 27 45 3.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPO1611 c8be240148e8cce40a78344b74191386 117 PRINTS PR00332 Histidine triad family signature 95 105 3.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPO1611 c8be240148e8cce40a78344b74191386 117 PRINTS PR00332 Histidine triad family signature 6 22 3.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPO1611 c8be240148e8cce40a78344b74191386 117 SUPERFAMILY SSF54197 2 112 2.47E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPO1611 c8be240148e8cce40a78344b74191386 117 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site YPO1611 c8be240148e8cce40a78344b74191386 117 Pfam PF01230 HIT domain 12 109 5.5E-30 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPO1611 c8be240148e8cce40a78344b74191386 117 PANTHER PTHR23089 2 112 3.1E-49 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YPO1611 c8be240148e8cce40a78344b74191386 117 PANTHER PTHR23089:SF2 2 112 3.1E-49 T 22-04-2016 YPO1611 c8be240148e8cce40a78344b74191386 117 Gene3D G3DSA:3.30.428.10 3 110 9.4E-39 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 Pfam PF04539 Sigma-70 region 3 97 163 7.5E-13 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 1.3E-82 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 Gene3D G3DSA:1.10.10.10 90 135 8.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1843 c1979db1e4e1bddea1670eda78007a02 240 Gene3D G3DSA:1.10.601.10 10 80 9.6E-13 T 22-04-2016 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 PIRSF PIRSF000770 3 240 2.0E-39 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 4.1E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 4.1E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 4.1E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 4.1E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 4.1E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 SUPERFAMILY SSF88659 150 238 3.18E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 SUPERFAMILY SSF88659 90 162 4.19E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 1.7E-31 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 61.091 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 PANTHER PTHR30385 13 240 1.5E-68 T 22-04-2016 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 Pfam PF04542 Sigma-70 region 2 16 88 2.7E-15 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 Pfam PF04545 Sigma-70, region 4 185 234 3.3E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 Gene3D G3DSA:1.10.10.10 174 238 4.5E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1843 c1979db1e4e1bddea1670eda78007a02 240 SUPERFAMILY SSF88946 5 88 1.88E-22 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 PANTHER PTHR30385:SF7 13 240 1.5E-68 T 22-04-2016 YPO1843 c1979db1e4e1bddea1670eda78007a02 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1815 d925700979695c9593fe0dde902dba67 309 PANTHER PTHR32196 1 309 2.1E-131 T 22-04-2016 YPO1815 d925700979695c9593fe0dde902dba67 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 22 299 2.3E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO1815 d925700979695c9593fe0dde902dba67 309 PANTHER PTHR32196:SF35 1 309 2.1E-131 T 22-04-2016 YPO4002 540446530cb012e7941ed7acb9a7e194 315 Gene3D G3DSA:1.10.3720.10 203 306 1.2E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4002 540446530cb012e7941ed7acb9a7e194 315 Gene3D G3DSA:1.10.3720.10 87 162 1.2E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4002 540446530cb012e7941ed7acb9a7e194 315 SUPERFAMILY SSF161098 89 160 8.5E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4002 540446530cb012e7941ed7acb9a7e194 315 SUPERFAMILY SSF161098 200 307 8.5E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4002 540446530cb012e7941ed7acb9a7e194 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 307 3.7E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4002 540446530cb012e7941ed7acb9a7e194 315 PANTHER PTHR30465:SF0 1 169 9.6E-137 T 22-04-2016 YPO4002 540446530cb012e7941ed7acb9a7e194 315 PANTHER PTHR30465:SF0 194 309 9.6E-137 T 22-04-2016 YPO4002 540446530cb012e7941ed7acb9a7e194 315 PANTHER PTHR30465 1 169 9.6E-137 T 22-04-2016 YPO4002 540446530cb012e7941ed7acb9a7e194 315 PANTHER PTHR30465 194 309 9.6E-137 T 22-04-2016 YPO2050 631e762c89ddde1d18f436150e1dd117 267 Pfam PF13649 Methyltransferase domain 80 178 1.1E-13 T 22-04-2016 YPO2050 631e762c89ddde1d18f436150e1dd117 267 Gene3D G3DSA:3.40.50.150 39 261 2.5E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2050 631e762c89ddde1d18f436150e1dd117 267 PANTHER PTHR10108:SF809 24 261 1.8E-114 T 22-04-2016 YPO2050 631e762c89ddde1d18f436150e1dd117 267 PIRSF PIRSF006325 21 263 3.0E-134 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YPO2050 631e762c89ddde1d18f436150e1dd117 267 PANTHER PTHR10108 24 261 1.8E-114 T 22-04-2016 YPO2050 631e762c89ddde1d18f436150e1dd117 267 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 24 262 1.1E-125 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YPO2050 631e762c89ddde1d18f436150e1dd117 267 SUPERFAMILY SSF53335 40 262 1.16E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2050 631e762c89ddde1d18f436150e1dd117 267 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 23 262 42.661 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 PANTHER PTHR13789 1 392 1.1E-215 T 22-04-2016 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 8.4E-15 T 22-04-2016 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 8.4E-15 T 22-04-2016 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 8.4E-15 T 22-04-2016 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 8.4E-15 T 22-04-2016 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 2.2E-146 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 SUPERFAMILY SSF51905 265 382 1.46E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 SUPERFAMILY SSF51905 2 175 1.46E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 Gene3D G3DSA:3.50.50.60 266 354 2.2E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 Gene3D G3DSA:3.50.50.60 2 180 2.2E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 Pfam PF01494 FAD binding domain 2 343 1.4E-22 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 388 6.4E-133 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 YPO0909 87b2afd925790230a349d4b3c470aaeb 392 PANTHER PTHR13789:SF214 1 392 1.1E-215 T 22-04-2016 YPO2970 8ca86850cb89e4b356547d220430d845 218 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 10 209 8.7E-98 T 22-04-2016 IPR008517 Protein of unknown function DUF799 YPO0573 8078c1d02b04e6d977fecf7ff6849af5 129 Hamap MF_00904 Modulator protein MzrA [mzrA]. 10 119 25.263 T 22-04-2016 IPR026574 Modulator protein MzrA YPO0573 8078c1d02b04e6d977fecf7ff6849af5 129 Pfam PF13721 SecD export protein N-terminal TM region 11 106 5.2E-20 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Pfam PF05192 MutS domain III 272 559 9.4E-39 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Gene3D G3DSA:3.40.50.300 568 797 1.5E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Gene3D G3DSA:1.10.1420.10 319 477 1.3E-53 T 22-04-2016 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 SUPERFAMILY SSF52540 567 798 2.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Pfam PF05190 MutS family domain IV 428 517 2.4E-28 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Pfam PF00488 MutS domain V 610 797 4.6E-88 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 843 25.243 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Gene3D G3DSA:3.40.1170.10 4 123 2.9E-50 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 PANTHER PTHR11361:SF86 1 850 0.0 T 22-04-2016 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Pfam PF01624 MutS domain I 11 122 8.7E-41 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 SUPERFAMILY SSF48334 270 566 6.41E-90 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 SMART SM00533 286 591 6.3E-105 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 SUPERFAMILY SSF53150 117 269 8.76E-43 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 PANTHER PTHR11361 1 850 0.0 T 22-04-2016 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 SUPERFAMILY SSF55271 5 116 4.45E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 SMART SM00534 607 794 3.1E-122 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Pfam PF05188 MutS domain II 131 256 4.4E-34 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 Gene3D G3DSA:3.30.420.110 129 258 1.2E-43 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YPO3354 587589fd1ac3352c0a0a0ea7ca6337d1 851 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 848 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 YPO2753 eac5bc96c2d4f2997a6e5ccd095d02cd 268 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 6.8E-45 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 YPO2753 eac5bc96c2d4f2997a6e5ccd095d02cd 268 PANTHER PTHR30269:SF0 6 258 1.7E-117 T 22-04-2016 YPO2753 eac5bc96c2d4f2997a6e5ccd095d02cd 268 PANTHER PTHR30269 6 258 1.7E-117 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 YPO1603 24cc8bd450262f492c6a023ed3948c88 268 PANTHER PTHR11825 1 249 3.5E-101 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPO1603 24cc8bd450262f492c6a023ed3948c88 268 PANTHER PTHR11825:SF55 1 249 3.5E-101 T 22-04-2016 YPO1603 24cc8bd450262f492c6a023ed3948c88 268 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 YPO1603 24cc8bd450262f492c6a023ed3948c88 268 Pfam PF01063 Amino-transferase class IV 24 247 1.7E-51 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPO1603 24cc8bd450262f492c6a023ed3948c88 268 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 6.3E-118 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 YPO1603 24cc8bd450262f492c6a023ed3948c88 268 Gene3D G3DSA:3.30.470.10 1 107 1.8E-32 T 22-04-2016 YPO1603 24cc8bd450262f492c6a023ed3948c88 268 SUPERFAMILY SSF56752 1 256 1.44E-69 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPO1603 24cc8bd450262f492c6a023ed3948c88 268 Gene3D G3DSA:3.20.10.10 123 256 2.1E-40 T 22-04-2016 YPO2509 b1cfc02a63b8cb6291c0ebd5c698d28c 258 PANTHER PTHR10108:SF890 3 235 1.5E-104 T 22-04-2016 YPO2509 b1cfc02a63b8cb6291c0ebd5c698d28c 258 PANTHER PTHR10108 3 235 1.5E-104 T 22-04-2016 YPO2509 b1cfc02a63b8cb6291c0ebd5c698d28c 258 Gene3D G3DSA:3.40.50.150 3 187 2.5E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2509 b1cfc02a63b8cb6291c0ebd5c698d28c 258 Gene3D G3DSA:1.10.150.290 188 237 6.6E-30 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YPO2509 b1cfc02a63b8cb6291c0ebd5c698d28c 258 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 257 43.271 T 22-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YPO2509 b1cfc02a63b8cb6291c0ebd5c698d28c 258 Pfam PF13649 Methyltransferase domain 35 124 1.3E-13 T 22-04-2016 YPO2509 b1cfc02a63b8cb6291c0ebd5c698d28c 258 SUPERFAMILY SSF53335 6 210 1.53E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2854 8ef116863a6e7af25c31d83e8d73f86a 112 Gene3D G3DSA:3.30.160.160 56 101 9.1E-19 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPO2854 8ef116863a6e7af25c31d83e8d73f86a 112 Gene3D G3DSA:3.30.160.160 5 50 1.0E-24 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPO2854 8ef116863a6e7af25c31d83e8d73f86a 112 SUPERFAMILY SSF160113 56 109 4.97E-15 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPO2854 8ef116863a6e7af25c31d83e8d73f86a 112 SUPERFAMILY SSF160113 4 60 2.88E-19 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPO2854 8ef116863a6e7af25c31d83e8d73f86a 112 PANTHER PTHR40606:SF1 3 111 4.1E-73 T 22-04-2016 YPO2854 8ef116863a6e7af25c31d83e8d73f86a 112 Pfam PF07411 Domain of unknown function (DUF1508) 63 109 3.3E-18 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPO2854 8ef116863a6e7af25c31d83e8d73f86a 112 Pfam PF07411 Domain of unknown function (DUF1508) 11 58 1.8E-23 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YPO2854 8ef116863a6e7af25c31d83e8d73f86a 112 PANTHER PTHR40606 3 111 4.1E-73 T 22-04-2016 YPO3063 861b7381a280e8bff0b4159f91d57fb0 189 PANTHER PTHR34875 1 189 1.2E-88 T 22-04-2016 YPO3063 861b7381a280e8bff0b4159f91d57fb0 189 Gene3D G3DSA:3.30.70.260 6 84 3.4E-32 T 22-04-2016 YPO3063 861b7381a280e8bff0b4159f91d57fb0 189 PANTHER PTHR34875:SF3 1 189 1.2E-88 T 22-04-2016 YPO3063 861b7381a280e8bff0b4159f91d57fb0 189 Gene3D G3DSA:3.30.70.260 91 188 2.7E-43 T 22-04-2016 YPO3063 861b7381a280e8bff0b4159f91d57fb0 189 SUPERFAMILY SSF55021 91 179 4.0E-19 T 22-04-2016 YPO3063 861b7381a280e8bff0b4159f91d57fb0 189 PIRSF PIRSF028103 5 180 3.8E-64 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 YPO3063 861b7381a280e8bff0b4159f91d57fb0 189 SUPERFAMILY SSF55021 7 85 1.54E-16 T 22-04-2016 YPO3063 861b7381a280e8bff0b4159f91d57fb0 189 Pfam PF13740 ACT domain 7 82 1.1E-26 T 22-04-2016 YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PANTHER PTHR11206 217 442 9.5E-100 T 22-04-2016 YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PANTHER PTHR11206 70 82 9.5E-100 T 22-04-2016 YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PANTHER PTHR11206 466 499 9.5E-100 T 22-04-2016 YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PIRSF PIRSF002869 1 510 4.7E-175 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PANTHER PTHR11206:SF90 217 442 9.5E-100 T 22-04-2016 YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PANTHER PTHR11206:SF90 70 82 9.5E-100 T 22-04-2016 YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PANTHER PTHR11206:SF90 466 499 9.5E-100 T 22-04-2016 YPO2043 645f67e6a132886836b98f769ca3c4ce 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 507 1.2E-163 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2043 645f67e6a132886836b98f769ca3c4ce 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2043 645f67e6a132886836b98f769ca3c4ce 511 Pfam PF03023 MviN-like protein 28 477 1.0E-149 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO1968 6b72eb8eec748d87bbd04cd169cd2d7f 348 Gene3D G3DSA:3.30.420.10 118 288 4.0E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1968 6b72eb8eec748d87bbd04cd169cd2d7f 348 PANTHER PTHR35004 1 305 1.5E-97 T 22-04-2016 YPO1968 6b72eb8eec748d87bbd04cd169cd2d7f 348 Gene3D G3DSA:1.10.10.60 9 39 5.6E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1968 6b72eb8eec748d87bbd04cd169cd2d7f 348 SUPERFAMILY SSF53098 118 290 2.78E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1968 6b72eb8eec748d87bbd04cd169cd2d7f 348 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1968 6b72eb8eec748d87bbd04cd169cd2d7f 348 Pfam PF00665 Integrase core domain 118 243 1.0E-25 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1968 6b72eb8eec748d87bbd04cd169cd2d7f 348 SUPERFAMILY SSF46689 12 86 1.37E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1968 6b72eb8eec748d87bbd04cd169cd2d7f 348 PANTHER PTHR35004:SF1 1 305 1.5E-97 T 22-04-2016 YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 PANTHER PTHR11751 85 465 1.4E-200 T 22-04-2016 YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Gene3D G3DSA:3.40.640.10 145 346 1.0E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Pfam PF00155 Aminotransferase class I and II 146 446 3.4E-28 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Gene3D G3DSA:3.90.1150.10 347 467 7.5E-7 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 4.2E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 SUPERFAMILY SSF46785 1 70 6.61E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 Gene3D G3DSA:1.10.10.10 2 67 6.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 SUPERFAMILY SSF53383 60 468 3.13E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 SMART SM00345 7 66 5.9E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1960 328ad5a8fdb51ba9f638ddeee74f7cc6 473 PANTHER PTHR11751:SF314 85 465 1.4E-200 T 22-04-2016 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Gene3D G3DSA:3.40.50.300 382 543 3.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 SUPERFAMILY SSF50447 784 881 5.89E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 SUPERFAMILY SSF52156 661 790 1.07E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 298 883 4.0E-291 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Pfam PF11987 Translation-initiation factor 2 668 773 1.9E-36 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 SUPERFAMILY SSF52540 382 551 5.26E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Gene3D G3DSA:3.40.50.10050 683 762 3.0E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-7 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 306 356 2.4E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 ProSitePatterns PS01176 Initiation factor 2 signature. 834 856 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Gene3D G3DSA:2.40.30.10 557 647 4.1E-21 T 22-04-2016 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 SUPERFAMILY SSF50447 557 638 4.91E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 PANTHER PTHR23115:SF184 359 711 3.2E-213 T 22-04-2016 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 PANTHER PTHR23115:SF184 735 883 3.2E-213 T 22-04-2016 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 386 542 9.7E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 SUPERFAMILY SSF46955 3 50 4.94E-13 T 22-04-2016 IPR009061 Putative DNA-binding domain YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 PANTHER PTHR23115 359 711 3.2E-213 T 22-04-2016 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 PANTHER PTHR23115 735 883 3.2E-213 T 22-04-2016 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 881 17.586 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Gene3D G3DSA:2.40.30.10 785 882 3.8E-40 T 22-04-2016 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Pfam PF00009 Elongation factor Tu GTP binding domain 387 544 2.7E-35 T 22-04-2016 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Gene3D G3DSA:3.30.56.50 2 50 1.2E-23 T 22-04-2016 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Pfam PF03144 Elongation factor Tu domain 2 804 871 8.8E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPO3496 e9acdbf13936617e2cfc0e2bdcc02a51 884 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 94 3.3E-16 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial YPO3661 d2e3807b2d845f4eafc88e5824f400b3 206 Pfam PF01794 Ferric reductase like transmembrane component 48 161 2.1E-16 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain YPO3661 d2e3807b2d845f4eafc88e5824f400b3 206 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 206 23.603 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 YPO3661 d2e3807b2d845f4eafc88e5824f400b3 206 PANTHER PTHR36964 1 206 5.3E-77 T 22-04-2016 YPO2607 a52186c9f3a456adcb0d9158cd022dc9 220 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 218 1.8E-58 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 YPO2607 a52186c9f3a456adcb0d9158cd022dc9 220 PANTHER PTHR12039 4 220 1.3E-65 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 YPO2607 a52186c9f3a456adcb0d9158cd022dc9 220 SUPERFAMILY SSF52374 11 219 2.39E-58 T 22-04-2016 YPO2607 a52186c9f3a456adcb0d9158cd022dc9 220 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 74 1.7E-13 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPO2607 a52186c9f3a456adcb0d9158cd022dc9 220 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 219 31.591 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 YPO2607 a52186c9f3a456adcb0d9158cd022dc9 220 Gene3D G3DSA:3.40.50.620 12 219 2.0E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2607 a52186c9f3a456adcb0d9158cd022dc9 220 Pfam PF01467 Cytidylyltransferase-like 13 193 2.3E-34 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPO1503 57dd792e5bc8ee621ee547d9e390c05a 289 Gene3D G3DSA:3.40.190.10 83 189 1.0E-21 T 22-04-2016 YPO1503 57dd792e5bc8ee621ee547d9e390c05a 289 PANTHER PTHR30126:SF31 1 289 1.5E-133 T 22-04-2016 YPO1503 57dd792e5bc8ee621ee547d9e390c05a 289 Pfam PF03466 LysR substrate binding domain 85 285 8.6E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YPO1503 57dd792e5bc8ee621ee547d9e390c05a 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1503 57dd792e5bc8ee621ee547d9e390c05a 289 Gene3D G3DSA:3.40.190.10 190 256 2.6E-11 T 22-04-2016 YPO1503 57dd792e5bc8ee621ee547d9e390c05a 289 Gene3D G3DSA:1.10.10.10 1 81 2.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1503 57dd792e5bc8ee621ee547d9e390c05a 289 PANTHER PTHR30126 1 289 1.5E-133 T 22-04-2016 YPO1503 57dd792e5bc8ee621ee547d9e390c05a 289 SUPERFAMILY SSF53850 85 286 4.07E-37 T 22-04-2016 YPO1503 57dd792e5bc8ee621ee547d9e390c05a 289 SUPERFAMILY SSF46785 1 109 1.52E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3705 328851187847c7673e82c6aca08887de 146 SUPERFAMILY SSF160719 30 137 5.23E-17 T 22-04-2016 YPO3705 328851187847c7673e82c6aca08887de 146 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 141 2.6E-38 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein YPO3705 328851187847c7673e82c6aca08887de 146 Gene3D G3DSA:3.10.450.40 26 135 7.8E-11 T 22-04-2016 YPO3705 328851187847c7673e82c6aca08887de 146 Pfam PF04965 Gene 25-like lysozyme 34 120 1.3E-17 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO1383 480d15168e7aaadd8a146dbfcb608a34 760 Gene3D G3DSA:3.20.70.20 5 759 0.0 T 22-04-2016 YPO1383 480d15168e7aaadd8a146dbfcb608a34 760 Pfam PF02901 Pyruvate formate lyase-like 24 614 1.1E-205 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 YPO1383 480d15168e7aaadd8a146dbfcb608a34 760 PANTHER PTHR30191:SF7 9 760 0.0 T 22-04-2016 YPO1383 480d15168e7aaadd8a146dbfcb608a34 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 YPO1383 480d15168e7aaadd8a146dbfcb608a34 760 PANTHER PTHR30191 9 760 0.0 T 22-04-2016 YPO1383 480d15168e7aaadd8a146dbfcb608a34 760 PIRSF PIRSF000379 8 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 YPO1383 480d15168e7aaadd8a146dbfcb608a34 760 Pfam PF01228 Glycine radical 630 741 3.4E-43 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 YPO1383 480d15168e7aaadd8a146dbfcb608a34 760 SUPERFAMILY SSF51998 4 758 2.35E-289 T 22-04-2016 YPO1383 480d15168e7aaadd8a146dbfcb608a34 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPO1324 609aa93e983b706b350aada8591b043d 198 SMART SM00014 56 165 6.9E-19 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1324 609aa93e983b706b350aada8591b043d 198 Pfam PF01569 PAP2 superfamily 62 165 2.8E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1324 609aa93e983b706b350aada8591b043d 198 Gene3D G3DSA:1.20.144.10 8 168 3.4E-21 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1324 609aa93e983b706b350aada8591b043d 198 PANTHER PTHR14969 1 193 6.2E-67 T 22-04-2016 YPO1324 609aa93e983b706b350aada8591b043d 198 PANTHER PTHR14969:SF20 1 193 6.2E-67 T 22-04-2016 YPO1324 609aa93e983b706b350aada8591b043d 198 SUPERFAMILY SSF48317 4 196 6.54E-38 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 PANTHER PTHR11699:SF115 1 484 0.0 T 22-04-2016 YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 Gene3D G3DSA:3.40.605.10 8 265 1.1E-102 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 Gene3D G3DSA:3.40.309.10 266 444 2.2E-69 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 4.3E-226 T 22-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 SUPERFAMILY SSF53720 7 482 6.28E-172 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 2.0E-178 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 PANTHER PTHR11699 1 484 0.0 T 22-04-2016 YPO1166 132c6f5247fd05190a2192f0c69b3d28 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.547 T 22-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPO2829 c31c78a31fe874e80d233a41b15421fa 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 32.16 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 YPO2829 c31c78a31fe874e80d233a41b15421fa 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2829 c31c78a31fe874e80d233a41b15421fa 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 3.8E-81 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 YPO2829 c31c78a31fe874e80d233a41b15421fa 212 Pfam PF00551 Formyl transferase 2 182 7.6E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2829 c31c78a31fe874e80d233a41b15421fa 212 Gene3D G3DSA:3.40.50.170 1 195 5.8E-73 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2829 c31c78a31fe874e80d233a41b15421fa 212 SUPERFAMILY SSF53328 2 201 2.22E-68 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2829 c31c78a31fe874e80d233a41b15421fa 212 PANTHER PTHR10520 1 194 3.5E-116 T 22-04-2016 YPO1703 7bbec0af1547f46428c9fd2d89e4a6bb 165 Pfam PF13185 GAF domain 39 147 3.3E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 YPO1703 7bbec0af1547f46428c9fd2d89e4a6bb 165 SUPERFAMILY SSF55781 2 151 1.32E-39 T 22-04-2016 IPR029016 GAF domain-like YPO1703 7bbec0af1547f46428c9fd2d89e4a6bb 165 Gene3D G3DSA:3.30.450.40 2 145 1.0E-46 T 22-04-2016 IPR029016 GAF domain-like YPO1703 7bbec0af1547f46428c9fd2d89e4a6bb 165 PANTHER PTHR21021 5 140 2.5E-54 T 22-04-2016 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 PANTHER PTHR11751:SF292 9 78 1.5E-49 T 22-04-2016 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 PANTHER PTHR11751:SF292 125 148 1.5E-49 T 22-04-2016 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 PANTHER PTHR11751 9 78 1.5E-49 T 22-04-2016 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 PANTHER PTHR11751 125 148 1.5E-49 T 22-04-2016 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.3E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.3E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 SUPERFAMILY SSF64288 63 240 3.45E-37 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 2.0E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 241 2.2E-86 T 22-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 Gene3D G3DSA:3.40.1410.10 83 241 4.3E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 SMART SM00866 96 236 1.7E-28 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 SUPERFAMILY SSF46785 8 83 2.02E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 SMART SM00345 17 75 4.1E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 Gene3D G3DSA:1.10.10.10 9 82 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3456 d047f4912370d7b92283cb3d3bbdcfd1 241 Pfam PF07702 UTRA domain 96 235 6.2E-30 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPO1508 93278ac40bb8894185f84ed4e38864c6 506 SUPERFAMILY SSF52540 254 494 7.17E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1508 93278ac40bb8894185f84ed4e38864c6 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1508 93278ac40bb8894185f84ed4e38864c6 506 Pfam PF00005 ABC transporter 280 434 5.4E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1508 93278ac40bb8894185f84ed4e38864c6 506 Pfam PF00005 ABC transporter 29 178 3.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1508 93278ac40bb8894185f84ed4e38864c6 506 SMART SM00382 288 483 2.1 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1508 93278ac40bb8894185f84ed4e38864c6 506 SMART SM00382 38 233 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1508 93278ac40bb8894185f84ed4e38864c6 506 SUPERFAMILY SSF52540 12 236 5.52E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1508 93278ac40bb8894185f84ed4e38864c6 506 Gene3D G3DSA:3.40.50.300 11 240 5.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1508 93278ac40bb8894185f84ed4e38864c6 506 Gene3D G3DSA:3.40.50.300 262 498 9.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1508 93278ac40bb8894185f84ed4e38864c6 506 PANTHER PTHR24220:SF303 15 388 1.9E-296 T 22-04-2016 YPO1508 93278ac40bb8894185f84ed4e38864c6 506 PANTHER PTHR24220 15 388 1.9E-296 T 22-04-2016 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 Gene3D G3DSA:3.30.70.360 209 319 1.1E-42 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO1631 8f75b236f89f8d1093553b6913fefe70 411 Pfam PF07687 Peptidase dimerisation domain 206 303 1.5E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO1631 8f75b236f89f8d1093553b6913fefe70 411 Pfam PF01546 Peptidase family M20/M25/M40 139 400 2.2E-14 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 408 3.0E-154 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 Gene3D G3DSA:3.40.630.10 322 407 7.3E-113 T 22-04-2016 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 Gene3D G3DSA:3.40.630.10 1 208 7.3E-113 T 22-04-2016 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 PANTHER PTHR11014 2 91 2.7E-201 T 22-04-2016 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 PANTHER PTHR11014 131 409 2.7E-201 T 22-04-2016 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 PIRSF PIRSF037215 1 408 1.3E-183 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 PANTHER PTHR11014:SF3 2 91 2.7E-201 T 22-04-2016 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 PANTHER PTHR11014:SF3 131 409 2.7E-201 T 22-04-2016 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.757 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 SUPERFAMILY SSF55031 208 320 7.22E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO1631 8f75b236f89f8d1093553b6913fefe70 411 SUPERFAMILY SSF53187 322 400 2.41E-78 T 22-04-2016 YPO1631 8f75b236f89f8d1093553b6913fefe70 411 SUPERFAMILY SSF53187 1 209 2.41E-78 T 22-04-2016 YPO3623 d07031d8dd32bb650760387c90160c64 193 Pfam PF03358 NADPH-dependent FMN reductase 1 139 4.9E-32 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YPO3623 d07031d8dd32bb650760387c90160c64 193 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 169 3.5E-71 T 22-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 YPO3623 d07031d8dd32bb650760387c90160c64 193 PANTHER PTHR30543:SF1 1 190 5.0E-64 T 22-04-2016 YPO3623 d07031d8dd32bb650760387c90160c64 193 Gene3D G3DSA:3.40.50.360 1 176 1.8E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO3623 d07031d8dd32bb650760387c90160c64 193 PANTHER PTHR30543 1 190 5.0E-64 T 22-04-2016 YPO3623 d07031d8dd32bb650760387c90160c64 193 SUPERFAMILY SSF52218 1 168 6.68E-32 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO1185 b0172aeb295f3e8744d0ca6cdd8c4fea 295 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 33 284 2.5E-77 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 YPO1185 b0172aeb295f3e8744d0ca6cdd8c4fea 295 Gene3D G3DSA:1.10.3720.10 86 284 2.4E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1185 b0172aeb295f3e8744d0ca6cdd8c4fea 295 PANTHER PTHR30043:SF5 3 291 8.5E-206 T 22-04-2016 YPO1185 b0172aeb295f3e8744d0ca6cdd8c4fea 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 283 1.6E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1185 b0172aeb295f3e8744d0ca6cdd8c4fea 295 SUPERFAMILY SSF161098 86 276 7.85E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1185 b0172aeb295f3e8744d0ca6cdd8c4fea 295 PANTHER PTHR30043 3 291 8.5E-206 T 22-04-2016 YPO3534 86628b9bb7eb05988500d41284089bde 151 Pfam PF12582 Protein of unknown function (DUF3757) 20 142 3.3E-35 T 22-04-2016 IPR022231 Protein of unknown function DUF3757 YPO3348 10510bacc155a2995a824af5d06e3acc 319 Pfam PF13518 Helix-turn-helix domain 13 49 5.6E-6 T 22-04-2016 YPO3348 10510bacc155a2995a824af5d06e3acc 319 PANTHER PTHR34294:SF5 1 318 1.1E-145 T 22-04-2016 YPO3348 10510bacc155a2995a824af5d06e3acc 319 PANTHER PTHR34294 1 318 1.1E-145 T 22-04-2016 YPO3348 10510bacc155a2995a824af5d06e3acc 319 SUPERFAMILY SSF100950 63 313 1.34E-69 T 22-04-2016 YPO3348 10510bacc155a2995a824af5d06e3acc 319 Gene3D G3DSA:3.40.50.1360 63 315 8.3E-78 T 22-04-2016 YPO3348 10510bacc155a2995a824af5d06e3acc 319 Gene3D G3DSA:1.10.10.10 19 56 1.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3348 10510bacc155a2995a824af5d06e3acc 319 Pfam PF04198 Putative sugar-binding domain 59 313 4.6E-80 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YPO2062 44defdb5e381c8851e8b96979b05cb02 438 PANTHER PTHR21666:SF207 1 432 4.5E-229 T 22-04-2016 YPO2062 44defdb5e381c8851e8b96979b05cb02 438 PANTHER PTHR21666 1 432 4.5E-229 T 22-04-2016 YPO2062 44defdb5e381c8851e8b96979b05cb02 438 Pfam PF01551 Peptidase family M23 311 405 1.3E-33 T 22-04-2016 IPR016047 Peptidase M23 YPO2062 44defdb5e381c8851e8b96979b05cb02 438 Gene3D G3DSA:2.70.70.10 265 407 1.2E-48 T 22-04-2016 YPO2062 44defdb5e381c8851e8b96979b05cb02 438 SMART SM00257 96 141 2.9E-5 T 22-04-2016 IPR018392 LysM domain YPO2062 44defdb5e381c8851e8b96979b05cb02 438 Pfam PF04225 Opacity-associated protein A LysM-like domain 95 159 1.5E-6 T 22-04-2016 IPR007340 Opacity-associated protein A YPO2062 44defdb5e381c8851e8b96979b05cb02 438 Gene3D G3DSA:3.10.350.10 96 138 2.3E-6 T 22-04-2016 IPR018392 LysM domain YPO2062 44defdb5e381c8851e8b96979b05cb02 438 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 1.6E-8 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal YPO2062 44defdb5e381c8851e8b96979b05cb02 438 SUPERFAMILY SSF51261 162 406 1.31E-69 T 22-04-2016 IPR011055 Duplicated hybrid motif YPO4033 53fcd0990cf6b363573118d02e137823 397 Pfam PF00589 Phage integrase family 206 370 8.1E-25 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO4033 53fcd0990cf6b363573118d02e137823 397 PANTHER PTHR30629 1 393 1.4E-277 T 22-04-2016 YPO4033 53fcd0990cf6b363573118d02e137823 397 Pfam PF13356 Domain of unknown function (DUF4102) 3 88 2.3E-19 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YPO4033 53fcd0990cf6b363573118d02e137823 397 SUPERFAMILY SSF56349 99 380 5.0E-64 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPO4033 53fcd0990cf6b363573118d02e137823 397 Gene3D G3DSA:1.10.443.10 206 378 3.3E-26 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO4033 53fcd0990cf6b363573118d02e137823 397 Gene3D G3DSA:1.10.150.130 99 195 3.0E-17 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPO4033 53fcd0990cf6b363573118d02e137823 397 PANTHER PTHR30629:SF3 1 393 1.4E-277 T 22-04-2016 YPO2126 ee46c756f6009ffdf5ecf7b42f1be204 364 PANTHER PTHR36180 28 330 2.7E-139 T 22-04-2016 YPO2126 ee46c756f6009ffdf5ecf7b42f1be204 364 PANTHER PTHR36180:SF2 28 330 2.7E-139 T 22-04-2016 YPO2126 ee46c756f6009ffdf5ecf7b42f1be204 364 Pfam PF02498 BRO family, N-terminal domain 56 146 4.3E-19 T 22-04-2016 IPR003497 BRO N-terminal domain YPO2126 ee46c756f6009ffdf5ecf7b42f1be204 364 SMART SM01040 55 146 6.7E-34 T 22-04-2016 IPR003497 BRO N-terminal domain YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 SMART SM00357 6 70 1.1E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 Gene3D G3DSA:2.40.50.140 4 68 4.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 28 37 1.9E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 43 61 1.9E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 7 22 1.9E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 SUPERFAMILY SSF50249 2 69 1.43E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PANTHER PTHR11544:SF65 1 70 8.7E-45 T 22-04-2016 YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PIRSF PIRSF002599 1 70 1.3E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PANTHER PTHR11544 1 70 8.7E-45 T 22-04-2016 YPO1655 9ada91f7eb5af6e6a8aa0dfe417ef213 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.3E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 239 1.4E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 341 454 3.4E-16 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.270.10 1060 1242 7.8E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.270.10 793 820 7.8E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.32 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.30.150.10 592 656 4.6E-31 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.2E-57 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.50.100 716 792 2.2E-30 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 1.1E-160 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 SUPERFAMILY SSF64484 343 939 0.0 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 SUPERFAMILY SSF64484 11 226 0.0 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 SUPERFAMILY SSF64484 1039 1340 0.0 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1100.10 20 151 5.4E-148 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1100.10 659 713 5.4E-148 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1100.10 445 591 5.4E-148 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 22-04-2016 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1110.10 346 444 1.1E-64 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:3.90.1110.10 153 230 1.1E-64 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 5 231 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 1034 1128 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 340 725 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 1182 1342 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 PANTHER PTHR20856 743 930 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.50.150 1045 1059 2.5E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Gene3D G3DSA:2.40.50.150 828 937 2.5E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.5E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO3747 95a4f5de45c83d19c36d6ff3d7c4f6f4 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.3E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO3978 92431c2e7543348152181097709e164e 375 Pfam PF13556 PucR C-terminal helix-turn-helix domain 315 373 8.6E-19 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain YPO3978 92431c2e7543348152181097709e164e 375 Pfam PF05651 Putative sugar diacid recognition 6 139 2.4E-52 T 22-04-2016 IPR008599 Putative sugar diacid recognition YPO3978 92431c2e7543348152181097709e164e 375 Gene3D G3DSA:1.10.10.60 317 351 2.1E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3978 92431c2e7543348152181097709e164e 375 PANTHER PTHR33744 1 375 6.1E-165 T 22-04-2016 YPO3978 92431c2e7543348152181097709e164e 375 PANTHER PTHR33744:SF1 1 375 6.1E-165 T 22-04-2016 YPO1296 bc373b3706f181f436ffe1e73fc0e5ca 173 ProSitePatterns PS00893 Nudix box signature. 58 79 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPO1296 bc373b3706f181f436ffe1e73fc0e5ca 173 PRINTS PR00502 NUDIX hydrolase family signature 53 67 5.5E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YPO1296 bc373b3706f181f436ffe1e73fc0e5ca 173 PRINTS PR00502 NUDIX hydrolase family signature 67 82 5.5E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YPO1296 bc373b3706f181f436ffe1e73fc0e5ca 173 PANTHER PTHR22769 23 172 3.0E-31 T 22-04-2016 YPO1296 bc373b3706f181f436ffe1e73fc0e5ca 173 PANTHER PTHR22769:SF33 23 172 3.0E-31 T 22-04-2016 YPO1296 bc373b3706f181f436ffe1e73fc0e5ca 173 SUPERFAMILY SSF55811 25 156 3.66E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO1296 bc373b3706f181f436ffe1e73fc0e5ca 173 Gene3D G3DSA:3.90.79.10 22 154 3.1E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO1296 bc373b3706f181f436ffe1e73fc0e5ca 173 Pfam PF00293 NUDIX domain 27 148 5.0E-28 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO3753 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPO3753 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPO3753 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPO3753 26470275fe3fceca384061a7b166f1cc 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPO3753 26470275fe3fceca384061a7b166f1cc 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.5E-20 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 YPO3753 26470275fe3fceca384061a7b166f1cc 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YPO3753 26470275fe3fceca384061a7b166f1cc 127 PANTHER PTHR33910:SF1 1 126 5.0E-35 T 22-04-2016 YPO3753 26470275fe3fceca384061a7b166f1cc 127 Gene3D G3DSA:1.20.5.1030 64 123 3.1E-25 T 22-04-2016 YPO3753 26470275fe3fceca384061a7b166f1cc 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE YPO3753 26470275fe3fceca384061a7b166f1cc 127 PANTHER PTHR33910 1 126 5.0E-35 T 22-04-2016 YPO3753 26470275fe3fceca384061a7b166f1cc 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 YPO0002 ceefa720730dc24a1494ba524724983e 153 SUPERFAMILY SSF54909 68 153 2.15E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO0002 ceefa720730dc24a1494ba524724983e 153 SMART SM00344 7 114 4.2E-42 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YPO0002 ceefa720730dc24a1494ba524724983e 153 Gene3D G3DSA:1.10.10.10 3 54 4.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0002 ceefa720730dc24a1494ba524724983e 153 SUPERFAMILY SSF46785 5 67 2.04E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0002 ceefa720730dc24a1494ba524724983e 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 3.6E-14 T 22-04-2016 YPO0002 ceefa720730dc24a1494ba524724983e 153 Gene3D G3DSA:3.30.70.920 60 141 2.4E-24 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO0002 ceefa720730dc24a1494ba524724983e 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 4.4E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO0002 ceefa720730dc24a1494ba524724983e 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPO0002 ceefa720730dc24a1494ba524724983e 153 PANTHER PTHR30154:SF2 1 153 1.1E-66 T 22-04-2016 YPO0002 ceefa720730dc24a1494ba524724983e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.7E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO0002 ceefa720730dc24a1494ba524724983e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.7E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO0002 ceefa720730dc24a1494ba524724983e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.7E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO0002 ceefa720730dc24a1494ba524724983e 153 PANTHER PTHR30154 1 153 1.1E-66 T 22-04-2016 YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 Pfam PF03472 Autoinducer binding domain 13 157 1.0E-28 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 Gene3D G3DSA:3.30.450.80 2 184 2.4E-41 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 SMART SM00421 179 236 1.3E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 SUPERFAMILY SSF46894 178 242 7.14E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 SUPERFAMILY SSF75516 2 162 4.18E-36 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 Gene3D G3DSA:1.10.10.10 185 242 9.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2457 b412f76fb45737753ea47e0cc45c66fb 245 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 235 2.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 SUPERFAMILY SSF52374 3 298 8.04E-113 T 22-04-2016 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 34.187 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.2E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.2E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.2E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.2E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.2E-26 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 Gene3D G3DSA:3.90.800.10 68 180 2.1E-39 T 22-04-2016 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 Gene3D G3DSA:1.10.1160.10 233 314 3.1E-36 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 3.1E-200 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 Gene3D G3DSA:3.40.50.620 2 67 2.4E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 Gene3D G3DSA:3.40.50.620 181 230 2.4E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 Gene3D G3DSA:1.10.10.350 363 462 7.3E-31 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 SUPERFAMILY SSF48163 299 461 5.89E-44 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 PANTHER PTHR11451 1 319 1.9E-102 T 22-04-2016 YPO2984 386203ee3eb1f42604fc60a77249e9ad 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.2E-115 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 YPO0743 f7b766b5a4d62be67be1e02552b52e41 393 Gene3D G3DSA:2.160.10.10 170 288 1.6E-9 T 22-04-2016 YPO0743 f7b766b5a4d62be67be1e02552b52e41 393 SUPERFAMILY SSF51161 168 237 8.87E-12 T 22-04-2016 IPR011004 Trimeric LpxA-like YPO0743 f7b766b5a4d62be67be1e02552b52e41 393 Pfam PF02120 Flagellar hook-length control protein FliK 272 355 9.3E-21 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal YPO0743 f7b766b5a4d62be67be1e02552b52e41 393 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 190 218 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO0743 f7b766b5a4d62be67be1e02552b52e41 393 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 172 200 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO0743 f7b766b5a4d62be67be1e02552b52e41 393 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 184 212 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO0743 f7b766b5a4d62be67be1e02552b52e41 393 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO0743 f7b766b5a4d62be67be1e02552b52e41 393 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 196 224 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO0743 f7b766b5a4d62be67be1e02552b52e41 393 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 178 206 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO2077 bbfa85f7f62484ed0b87b463b434cad4 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.5E-111 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 YPO2077 bbfa85f7f62484ed0b87b463b434cad4 270 SUPERFAMILY SSF52540 1 269 1.58E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2077 bbfa85f7f62484ed0b87b463b434cad4 270 PANTHER PTHR13696:SF1 1 258 3.7E-96 T 22-04-2016 YPO2077 bbfa85f7f62484ed0b87b463b434cad4 270 Gene3D G3DSA:3.40.50.300 1 248 5.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2077 bbfa85f7f62484ed0b87b463b434cad4 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 8.1E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YPO2077 bbfa85f7f62484ed0b87b463b434cad4 270 PANTHER PTHR13696 1 258 3.7E-96 T 22-04-2016 YPO2077 bbfa85f7f62484ed0b87b463b434cad4 270 PIRSF PIRSF003092 1 270 6.6E-99 T 22-04-2016 IPR025501 ATP binding protein MinD YPO1252 f39276d7c8a05bced86eedf50ad92e7d 259 SUPERFAMILY SSF88874 96 258 2.49E-44 T 22-04-2016 YPO1252 f39276d7c8a05bced86eedf50ad92e7d 259 PANTHER PTHR35191 1 258 5.6E-109 T 22-04-2016 YPO1252 f39276d7c8a05bced86eedf50ad92e7d 259 Pfam PF07484 Phage Tail Collar Domain 107 154 2.5E-12 T 22-04-2016 IPR011083 Phage tail collar domain YPO1252 f39276d7c8a05bced86eedf50ad92e7d 259 Gene3D G3DSA:3.90.1340.10 102 159 4.5E-12 T 22-04-2016 IPR011083 Phage tail collar domain YPO0424 a3a59a445bc3fbbb92946c2685fc1ccf 361 Gene3D G3DSA:2.160.20.10 26 359 7.3E-96 T 22-04-2016 IPR012334 Pectin lyase fold YPO0424 a3a59a445bc3fbbb92946c2685fc1ccf 361 PANTHER PTHR31321 285 358 7.4E-91 T 22-04-2016 YPO0424 a3a59a445bc3fbbb92946c2685fc1ccf 361 PANTHER PTHR31321 15 268 7.4E-91 T 22-04-2016 YPO0424 a3a59a445bc3fbbb92946c2685fc1ccf 361 PANTHER PTHR31321:SF1 285 358 7.4E-91 T 22-04-2016 YPO0424 a3a59a445bc3fbbb92946c2685fc1ccf 361 PANTHER PTHR31321:SF1 15 268 7.4E-91 T 22-04-2016 YPO0424 a3a59a445bc3fbbb92946c2685fc1ccf 361 SUPERFAMILY SSF51126 28 357 3.14E-60 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO0424 a3a59a445bc3fbbb92946c2685fc1ccf 361 Pfam PF01095 Pectinesterase 31 335 3.1E-38 T 22-04-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 89 100 1.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 101 119 1.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 33 62 1.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 PRINTS PR01576 Peptide deformylase signature 120 149 1.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 PANTHER PTHR10458:SF10 1 168 1.0E-113 T 22-04-2016 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.2E-64 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.435 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 SUPERFAMILY SSF56420 3 165 9.16E-62 T 22-04-2016 IPR023635 Peptide deformylase YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 PANTHER PTHR10458 1 168 1.0E-113 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 Gene3D G3DSA:3.90.45.10 5 166 1.6E-63 T 22-04-2016 IPR023635 Peptide deformylase YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 PIRSF PIRSF004749 1 169 4.2E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YPO0242 01b5a1b1b3cddddbbd146d33a14ec30a 170 Pfam PF01327 Polypeptide deformylase 4 152 1.3E-49 T 22-04-2016 IPR023635 Peptide deformylase YPO1439 4407ed531de5f95b05bd00aa61082b3f 148 PANTHER PTHR31503 1 148 2.4E-63 T 22-04-2016 YPO1439 4407ed531de5f95b05bd00aa61082b3f 148 PIRSF PIRSF028777 1 139 7.1E-55 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 YPO1439 4407ed531de5f95b05bd00aa61082b3f 148 Pfam PF03733 Inner membrane component domain 77 127 2.6E-18 T 22-04-2016 IPR005185 Inner membrane component domain YPO1439 4407ed531de5f95b05bd00aa61082b3f 148 Pfam PF03733 Inner membrane component domain 4 53 3.0E-9 T 22-04-2016 IPR005185 Inner membrane component domain YPO3551 dd248c99b5865a9937a582b0f5e9c349 191 PANTHER PTHR34606:SF4 1 190 2.2E-96 T 22-04-2016 YPO3551 dd248c99b5865a9937a582b0f5e9c349 191 Pfam PF04972 BON domain 125 190 5.3E-18 T 22-04-2016 IPR007055 BON domain YPO3551 dd248c99b5865a9937a582b0f5e9c349 191 Pfam PF04972 BON domain 46 114 1.7E-14 T 22-04-2016 IPR007055 BON domain YPO3551 dd248c99b5865a9937a582b0f5e9c349 191 SMART SM00749 129 190 3.1E-4 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPO3551 dd248c99b5865a9937a582b0f5e9c349 191 SMART SM00749 51 114 1.4E-8 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPO3551 dd248c99b5865a9937a582b0f5e9c349 191 PANTHER PTHR34606 1 190 2.2E-96 T 22-04-2016 YPO1289 9ce816b557d3e46178660617e12cd263 380 Gene3D G3DSA:3.90.850.10 167 356 2.1E-21 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1289 9ce816b557d3e46178660617e12cd263 380 SUPERFAMILY SSF56529 155 361 7.46E-25 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1289 9ce816b557d3e46178660617e12cd263 380 PANTHER PTHR11820:SF82 171 367 3.1E-84 T 22-04-2016 YPO1289 9ce816b557d3e46178660617e12cd263 380 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 208 355 7.0E-9 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1289 9ce816b557d3e46178660617e12cd263 380 PANTHER PTHR11820 171 367 3.1E-84 T 22-04-2016 YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Gene3D G3DSA:3.40.50.2300 170 332 1.6E-29 T 22-04-2016 YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 326 3.3E-48 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 PANTHER PTHR30146 1 335 9.9E-290 T 22-04-2016 YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Gene3D G3DSA:3.40.50.2300 51 169 1.1E-20 T 22-04-2016 YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 SMART SM00354 1 73 7.1E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Gene3D G3DSA:1.10.260.40 1 50 6.2E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 SUPERFAMILY SSF53822 69 333 1.29E-38 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 2.2E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 PANTHER PTHR30146:SF36 1 335 9.9E-290 T 22-04-2016 YPO1642 d1b7172ffa87ca38a7c226a9dd8f2c43 347 SUPERFAMILY SSF47413 1 59 1.13E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO1473 a01c5543127cf624859501bb048874d2 766 SUPERFAMILY SSF53955 684 761 2.08E-7 T 22-04-2016 IPR023346 Lysozyme-like domain YPO1473 a01c5543127cf624859501bb048874d2 766 SUPERFAMILY SSF53955 511 567 2.08E-7 T 22-04-2016 IPR023346 Lysozyme-like domain YPO1473 a01c5543127cf624859501bb048874d2 766 SUPERFAMILY SSF53955 615 655 2.08E-7 T 22-04-2016 IPR023346 Lysozyme-like domain YPO1473 a01c5543127cf624859501bb048874d2 766 SUPERFAMILY SSF51261 32 158 1.62E-6 T 22-04-2016 IPR011055 Duplicated hybrid motif YPO1473 a01c5543127cf624859501bb048874d2 766 Gene3D G3DSA:2.70.70.10 31 158 4.4E-11 T 22-04-2016 YPO1473 a01c5543127cf624859501bb048874d2 766 Pfam PF01551 Peptidase family M23 42 155 4.1E-6 T 22-04-2016 IPR016047 Peptidase M23 YPO0988 f61d6cec327329b2a2b42c00b00bf349 407 PANTHER PTHR23546 2 407 6.8E-129 T 22-04-2016 YPO0988 f61d6cec327329b2a2b42c00b00bf349 407 SUPERFAMILY SSF103473 20 396 9.68E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0988 f61d6cec327329b2a2b42c00b00bf349 407 Gene3D G3DSA:1.20.1250.20 214 396 8.4E-6 T 22-04-2016 YPO0988 f61d6cec327329b2a2b42c00b00bf349 407 PANTHER PTHR23546:SF1 2 407 6.8E-129 T 22-04-2016 YPO0988 f61d6cec327329b2a2b42c00b00bf349 407 Pfam PF07690 Major Facilitator Superfamily 22 359 4.8E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO0988 f61d6cec327329b2a2b42c00b00bf349 407 Gene3D G3DSA:1.20.1250.20 19 205 1.6E-16 T 22-04-2016 YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 Gene3D G3DSA:3.40.50.300 3 236 4.5E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 Pfam PF08402 TOBE domain 279 350 5.8E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 SMART SM00382 28 211 6.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 Gene3D G3DSA:2.40.50.100 239 283 3.8E-17 T 22-04-2016 YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 Gene3D G3DSA:2.40.50.100 344 357 3.8E-17 T 22-04-2016 YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 Gene3D G3DSA:2.40.50.140 284 343 1.0E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 PANTHER PTHR24220:SF572 5 247 2.5E-180 T 22-04-2016 YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 SUPERFAMILY SSF52540 4 243 1.58E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 SUPERFAMILY SSF50331 236 356 1.87E-27 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 Pfam PF00005 ABC transporter 19 161 4.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0857 2fc711026f635bdb8bbeaa8d9d3659c9 366 PANTHER PTHR24220 5 247 2.5E-180 T 22-04-2016 YPO3816a 47ac2b8136d5bb9db564377881bc68f7 90 PANTHER PTHR38775 1 90 5.0E-31 T 22-04-2016 YPO3816a 47ac2b8136d5bb9db564377881bc68f7 90 PANTHER PTHR38775:SF1 1 90 5.0E-31 T 22-04-2016 YPO3816a 47ac2b8136d5bb9db564377881bc68f7 90 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 3.7E-27 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 YPO1807 62de33f264b731dbbcd39968341644e9 314 Pfam PF10135 Rod binding protein 49 95 2.3E-16 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 52 72 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 110 135 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 27 50 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 5.8E-99 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 161 295 2.6E-20 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 YPO1807 62de33f264b731dbbcd39968341644e9 314 SMART SM00047 140 306 1.6E-42 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 YPO1807 62de33f264b731dbbcd39968341644e9 314 PANTHER PTHR33308:SF3 13 314 2.2E-56 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 PANTHER PTHR33308 13 314 2.2E-56 T 22-04-2016 YPO1807 62de33f264b731dbbcd39968341644e9 314 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 295 1.7E-107 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 PANTHER PTHR10359 10 343 5.3E-113 T 22-04-2016 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 Gene3D G3DSA:3.90.79.10 229 346 3.1E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 SUPERFAMILY SSF48150 2 225 1.52E-78 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.1E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 Gene3D G3DSA:1.10.340.30 22 122 1.6E-45 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 5.9E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 SMART SM00478 39 190 2.2E-51 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 Gene3D G3DSA:1.10.1670.10 123 224 4.2E-40 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 SMART SM00525 191 211 2.6E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 167 3.1E-21 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 SUPERFAMILY SSF55811 220 346 4.19E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 276 1.3E-123 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 YPO0952 e1b08313703ae963f8b0220e6d9f66b6 371 Pfam PF14815 NUDIX domain 234 342 1.2E-22 T 22-04-2016 IPR029119 MutY, C-terminal YPO2704 58641ced9bdde71609856abbc6afba2c 228 SMART SM00987 49 210 2.2E-41 T 22-04-2016 YPO2704 58641ced9bdde71609856abbc6afba2c 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 YPO2704 58641ced9bdde71609856abbc6afba2c 228 Gene3D G3DSA:3.40.470.10 6 221 4.5E-103 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YPO2704 58641ced9bdde71609856abbc6afba2c 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 4.9E-89 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 YPO2704 58641ced9bdde71609856abbc6afba2c 228 PANTHER PTHR11264:SF10 4 228 9.6E-182 T 22-04-2016 YPO2704 58641ced9bdde71609856abbc6afba2c 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.644 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 YPO2704 58641ced9bdde71609856abbc6afba2c 228 SUPERFAMILY SSF52141 6 221 9.16E-97 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YPO2704 58641ced9bdde71609856abbc6afba2c 228 PANTHER PTHR11264 4 228 9.6E-182 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 YPO2704 58641ced9bdde71609856abbc6afba2c 228 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 7.3E-24 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YPO2704 58641ced9bdde71609856abbc6afba2c 228 SMART SM00986 49 210 2.2E-41 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YPO2576 6e89179a8c5de26cfeed02f74f31a2aa 284 PANTHER PTHR30514:SF3 5 271 1.1E-101 T 22-04-2016 YPO2576 6e89179a8c5de26cfeed02f74f31a2aa 284 Gene3D G3DSA:1.10.10.10 8 84 7.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2576 6e89179a8c5de26cfeed02f74f31a2aa 284 Gene3D G3DSA:3.40.50.10490 115 271 2.9E-23 T 22-04-2016 YPO2576 6e89179a8c5de26cfeed02f74f31a2aa 284 PANTHER PTHR30514 5 271 1.1E-101 T 22-04-2016 YPO2576 6e89179a8c5de26cfeed02f74f31a2aa 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 74 6.0E-10 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPO2576 6e89179a8c5de26cfeed02f74f31a2aa 284 Pfam PF01380 SIS domain 140 266 1.7E-21 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO2576 6e89179a8c5de26cfeed02f74f31a2aa 284 SUPERFAMILY SSF46689 9 85 4.84E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2576 6e89179a8c5de26cfeed02f74f31a2aa 284 SUPERFAMILY SSF53697 109 277 1.36E-26 T 22-04-2016 YPO0013a a9b974e1e7afc839dc87cdf4f8cd8d10 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 5.9E-46 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 YPO0013a a9b974e1e7afc839dc87cdf4f8cd8d10 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 6.0E-46 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 YPO2501 4bc1aeb6043c1e9602449d88abcbaabd 305 SUPERFAMILY SSF53822 16 300 7.74E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO2501 4bc1aeb6043c1e9602449d88abcbaabd 305 Gene3D G3DSA:3.40.50.2300 27 145 3.3E-43 T 22-04-2016 YPO2501 4bc1aeb6043c1e9602449d88abcbaabd 305 PANTHER PTHR32196:SF9 20 299 3.2E-93 T 22-04-2016 YPO2501 4bc1aeb6043c1e9602449d88abcbaabd 305 PANTHER PTHR32196 20 299 3.2E-93 T 22-04-2016 YPO2501 4bc1aeb6043c1e9602449d88abcbaabd 305 Pfam PF13407 Periplasmic binding protein domain 31 276 2.2E-54 T 22-04-2016 IPR025997 Periplasmic binding protein YPO2501 4bc1aeb6043c1e9602449d88abcbaabd 305 Gene3D G3DSA:3.40.50.2300 146 293 3.5E-43 T 22-04-2016 YPO0557 e77f27c48517e610b44ee7374fded134 306 SUPERFAMILY SSF56059 97 302 3.54E-62 T 22-04-2016 YPO0557 e77f27c48517e610b44ee7374fded134 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 37.037 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0557 e77f27c48517e610b44ee7374fded134 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 1.7E-110 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0557 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.40.50.20 3 84 1.9E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO0557 e77f27c48517e610b44ee7374fded134 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 1.3E-20 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0557 e77f27c48517e610b44ee7374fded134 306 PIRSF PIRSF039102 41 306 2.1E-93 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0557 e77f27c48517e610b44ee7374fded134 306 PANTHER PTHR23132 1 305 5.1E-98 T 22-04-2016 YPO0557 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.30.470.20 181 303 6.3E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO0557 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.30.470.20 85 103 6.3E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO0557 e77f27c48517e610b44ee7374fded134 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0557 e77f27c48517e610b44ee7374fded134 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0557 e77f27c48517e610b44ee7374fded134 306 PANTHER PTHR23132:SF0 1 305 5.1E-98 T 22-04-2016 YPO0557 e77f27c48517e610b44ee7374fded134 306 SUPERFAMILY SSF52440 3 96 2.97E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO0557 e77f27c48517e610b44ee7374fded134 306 Gene3D G3DSA:3.30.1490.20 106 180 3.9E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO0557 e77f27c48517e610b44ee7374fded134 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 1.0E-68 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3054 8e852d8205511c02c361c5cd679e614e 225 PANTHER PTHR34385 5 71 1.7E-65 T 22-04-2016 YPO3054 8e852d8205511c02c361c5cd679e614e 225 PANTHER PTHR34385 90 223 1.7E-65 T 22-04-2016 YPO3054 8e852d8205511c02c361c5cd679e614e 225 SUPERFAMILY SSF55166 21 182 1.37E-20 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO3054 8e852d8205511c02c361c5cd679e614e 225 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 26 181 8.0E-38 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 YPO3054 8e852d8205511c02c361c5cd679e614e 225 PANTHER PTHR34385:SF1 5 71 1.7E-65 T 22-04-2016 YPO3054 8e852d8205511c02c361c5cd679e614e 225 PANTHER PTHR34385:SF1 90 223 1.7E-65 T 22-04-2016 YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 PANTHER PTHR24095 1 438 4.1E-152 T 22-04-2016 YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 Gene3D G3DSA:2.30.38.10 272 348 6.5E-24 T 22-04-2016 YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 Gene3D G3DSA:1.10.1200.10 472 538 7.5E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 Pfam PF00501 AMP-binding enzyme 2 357 9.3E-78 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 95 106 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 Gene3D G3DSA:3.40.50.980 2 104 1.8E-21 T 22-04-2016 YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 Pfam PF00550 Phosphopantetheine attachment site 469 530 2.0E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 PANTHER PTHR24095:SF137 1 438 4.1E-152 T 22-04-2016 YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 Gene3D G3DSA:3.40.50.980 105 271 4.6E-42 T 22-04-2016 YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 Gene3D G3DSA:3.30.300.30 353 471 1.7E-23 T 22-04-2016 YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 SUPERFAMILY SSF56801 3 481 6.8E-111 T 22-04-2016 YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 SUPERFAMILY SSF47336 462 530 5.63E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0777 2bdeaedc9e7b4640f4c1f1b558d36bb5 550 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2 381 3.2E-104 T 22-04-2016 IPR010071 Amino acid adenylation domain YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 6.9E-5 T 22-04-2016 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 6.9E-5 T 22-04-2016 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 6.9E-5 T 22-04-2016 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 6.9E-5 T 22-04-2016 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 SUPERFAMILY SSF103473 250 422 2.49E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 SUPERFAMILY SSF103473 474 499 2.49E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 SUPERFAMILY SSF103473 10 195 2.49E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 Gene3D G3DSA:1.20.1250.20 475 500 2.4E-23 T 22-04-2016 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 Gene3D G3DSA:1.20.1250.20 265 423 2.4E-23 T 22-04-2016 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 PANTHER PTHR23501 3 500 0.0 T 22-04-2016 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 497 4.3E-208 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 PANTHER PTHR23501:SF52 3 500 0.0 T 22-04-2016 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 Pfam PF07690 Major Facilitator Superfamily 18 412 5.2E-55 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO3268 a384938b7c56d3ed275f31e424c2f0d0 511 Gene3D G3DSA:1.20.1250.20 13 186 2.8E-30 T 22-04-2016 YPO1646 f7e90058be883353b65b70e487866df8 127 PANTHER PTHR33204:SF7 8 124 3.6E-71 T 22-04-2016 YPO1646 f7e90058be883353b65b70e487866df8 127 Gene3D G3DSA:1.10.10.10 7 125 4.9E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1646 f7e90058be883353b65b70e487866df8 127 SUPERFAMILY SSF46785 15 120 7.8E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1646 f7e90058be883353b65b70e487866df8 127 Pfam PF01638 HxlR-like helix-turn-helix 30 117 3.1E-28 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type YPO1646 f7e90058be883353b65b70e487866df8 127 PANTHER PTHR33204 8 124 3.6E-71 T 22-04-2016 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 PIRSF PIRSF000193 3 271 4.8E-76 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 Gene3D G3DSA:3.40.50.720 2 161 1.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 247 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 4.0E-29 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 2.0E-70 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 SUPERFAMILY SSF48179 163 271 3.74E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 PANTHER PTHR11645 1 271 1.7E-108 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 PANTHER PTHR11645:SF0 1 271 1.7E-108 T 22-04-2016 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.83 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 Gene3D G3DSA:1.10.3730.10 164 269 9.0E-29 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 SUPERFAMILY SSF51735 4 162 1.54E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0942 587c99ae403fa52b4a6f4ec0d96754a6 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 1.4E-18 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YPO2724 8e7cfcb9efca0fba9ce8178c0a0d4058 1275 Pfam PF14331 ImcF-related N-terminal domain 253 535 9.0E-75 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain YPO2724 8e7cfcb9efca0fba9ce8178c0a0d4058 1275 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1024 1215 3.1E-45 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal YPO2724 8e7cfcb9efca0fba9ce8178c0a0d4058 1275 PANTHER PTHR36153:SF3 46 1273 0.0 T 22-04-2016 YPO2724 8e7cfcb9efca0fba9ce8178c0a0d4058 1275 PANTHER PTHR36153 46 1273 0.0 T 22-04-2016 YPO2724 8e7cfcb9efca0fba9ce8178c0a0d4058 1275 SUPERFAMILY SSF52540 184 358 2.99E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2724 8e7cfcb9efca0fba9ce8178c0a0d4058 1275 Pfam PF06761 Intracellular multiplication and human macrophage-killing 586 898 2.6E-68 T 22-04-2016 IPR009612 ImcF-related YPO2724 8e7cfcb9efca0fba9ce8178c0a0d4058 1275 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 72 1267 3.5E-244 T 22-04-2016 IPR017731 Type VI secretion system, IcmF YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 PANTHER PTHR11649:SF5 1 464 7.9E-165 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 SUPERFAMILY SSF52540 207 469 2.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Gene3D G3DSA:3.40.50.300 207 388 3.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Gene3D G3DSA:3.40.50.300 2 173 2.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 463 4.4E-177 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Hamap MF_00195 GTPase Der [der]. 2 466 38.65 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Gene3D G3DSA:3.30.300.20 389 464 2.7E-22 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Pfam PF01926 50S ribosome-binding GTPase 210 327 5.5E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.3E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.9E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.9E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 PIRSF PIRSF006485 1 471 1.3E-177 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 3.4E-20 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 372 5.2E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 SUPERFAMILY SSF52540 4 168 6.39E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 PANTHER PTHR11649 1 464 7.9E-165 T 22-04-2016 YPO2875 f9d3ee1a6cc27a9bd162b2cd552b0e7e 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 463 2.0E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like YPO2907 529623d23d9d125723799d1f28385b5a 417 PANTHER PTHR11680:SF9 1 416 0.0 T 22-04-2016 YPO2907 529623d23d9d125723799d1f28385b5a 417 Gene3D G3DSA:3.40.640.10 37 285 7.7E-107 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO2907 529623d23d9d125723799d1f28385b5a 417 PANTHER PTHR11680 1 416 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPO2907 529623d23d9d125723799d1f28385b5a 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.153 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPO2907 529623d23d9d125723799d1f28385b5a 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPO2907 529623d23d9d125723799d1f28385b5a 417 SUPERFAMILY SSF53383 6 416 3.99E-180 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO2907 529623d23d9d125723799d1f28385b5a 417 Gene3D G3DSA:3.90.1150.10 286 416 2.0E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO2907 529623d23d9d125723799d1f28385b5a 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.8E-184 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPO2907 529623d23d9d125723799d1f28385b5a 417 PIRSF PIRSF000412 1 417 1.3E-168 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 SUPERFAMILY SSF55031 212 322 2.72E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 SUPERFAMILY SSF53187 7 213 2.25E-72 T 22-04-2016 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 SUPERFAMILY SSF53187 325 407 2.25E-72 T 22-04-2016 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 7 398 9.0E-102 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 PANTHER PTHR11014:SF3 135 410 9.8E-170 T 22-04-2016 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 PANTHER PTHR11014:SF3 4 95 9.8E-170 T 22-04-2016 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 Gene3D G3DSA:3.30.70.360 213 322 1.8E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 Pfam PF01546 Peptidase family M20/M25/M40 143 400 2.0E-10 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 Pfam PF07687 Peptidase dimerisation domain 209 309 1.8E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 179 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 Gene3D G3DSA:3.40.630.10 6 212 3.4E-97 T 22-04-2016 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 Gene3D G3DSA:3.40.630.10 325 408 3.4E-97 T 22-04-2016 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 PANTHER PTHR11014 135 410 9.8E-170 T 22-04-2016 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 PANTHER PTHR11014 4 95 9.8E-170 T 22-04-2016 YPO1009 dfab32463162bcbb70aeb4ec02bbf4e3 410 PIRSF PIRSF037215 4 410 4.4E-158 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 PANTHER PTHR11079:SF73 6 323 3.5E-157 T 22-04-2016 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 SUPERFAMILY SSF55120 77 321 5.14E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 PANTHER PTHR11079 6 323 3.5E-157 T 22-04-2016 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 Pfam PF01479 S4 domain 18 65 1.0E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 SMART SM00363 18 83 1.5E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 4.1E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 Gene3D G3DSA:3.10.290.10 18 69 5.3E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 SUPERFAMILY SSF55174 17 69 1.48E-11 T 22-04-2016 YPO3277 3044132fadfb34e8edbc70ae541606cf 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 313 6.1E-107 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO4037 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 6.3E-163 T 22-04-2016 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 YPO4037 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 Pfam PF13407 Periplasmic binding protein domain 38 285 3.0E-60 T 22-04-2016 IPR025997 Periplasmic binding protein YPO4037 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 SUPERFAMILY SSF53822 24 317 5.62E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO4037 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 Gene3D G3DSA:3.40.50.2300 143 317 9.3E-46 T 22-04-2016 YPO4037 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 PANTHER PTHR30036 1 331 3.8E-185 T 22-04-2016 YPO4037 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 PANTHER PTHR30036:SF1 1 331 3.8E-185 T 22-04-2016 YPO4037 a04e67fb803b3b3f76aa8f7ebe2bff6d 331 Gene3D G3DSA:3.40.50.2300 25 142 4.8E-34 T 22-04-2016 YPO2666 c049694d96fef92d1df28b11bcece56e 144 SUPERFAMILY SSF51278 18 118 1.05E-42 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2666 c049694d96fef92d1df28b11bcece56e 144 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 18 113 7.5E-41 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2666 c049694d96fef92d1df28b11bcece56e 144 Pfam PF00699 Urease beta subunit 19 113 1.1E-40 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2666 c049694d96fef92d1df28b11bcece56e 144 PANTHER PTHR33569 1 143 2.3E-80 T 22-04-2016 YPO2666 c049694d96fef92d1df28b11bcece56e 144 Gene3D G3DSA:2.10.150.10 18 142 2.6E-47 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2666 c049694d96fef92d1df28b11bcece56e 144 PANTHER PTHR33569:SF1 1 143 2.3E-80 T 22-04-2016 YPO2666 c049694d96fef92d1df28b11bcece56e 144 Hamap MF_01954 Urease subunit beta [ureB]. 15 115 29.427 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO0065 a5d67ba558b6fe71fbcd47adfa83b37c 144 SMART SM00450 41 139 2.0E-18 T 22-04-2016 IPR001763 Rhodanese-like domain YPO0065 a5d67ba558b6fe71fbcd47adfa83b37c 144 SUPERFAMILY SSF52821 17 143 1.7E-29 T 22-04-2016 IPR001763 Rhodanese-like domain YPO0065 a5d67ba558b6fe71fbcd47adfa83b37c 144 PANTHER PTHR12231 40 144 2.6E-53 T 22-04-2016 YPO0065 a5d67ba558b6fe71fbcd47adfa83b37c 144 Pfam PF00581 Rhodanese-like domain 44 134 1.1E-16 T 22-04-2016 IPR001763 Rhodanese-like domain YPO0065 a5d67ba558b6fe71fbcd47adfa83b37c 144 Gene3D G3DSA:3.40.250.10 26 143 4.9E-27 T 22-04-2016 IPR001763 Rhodanese-like domain YPO0065 a5d67ba558b6fe71fbcd47adfa83b37c 144 PANTHER PTHR12231:SF138 40 144 2.6E-53 T 22-04-2016 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 16 486 1.7E-164 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 Gene3D G3DSA:3.40.1190.10 103 337 8.6E-78 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 SUPERFAMILY SSF53244 334 486 1.53E-51 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 Pfam PF08245 Mur ligase middle domain 109 313 5.9E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 Gene3D G3DSA:3.40.1390.10 2 99 3.4E-31 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 Pfam PF01225 Mur ligase family, catalytic domain 20 97 6.0E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 486 33.652 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 419 4.5E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 PANTHER PTHR23135 10 486 5.1E-223 T 22-04-2016 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 Gene3D G3DSA:3.90.190.20 338 479 2.1E-58 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 PANTHER PTHR23135:SF4 10 486 5.1E-223 T 22-04-2016 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 SUPERFAMILY SSF53623 100 333 1.83E-76 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0550 68529b16b2ddc2e744c954fcc3e98180 490 SUPERFAMILY SSF63418 1 98 2.09E-23 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 Gene3D G3DSA:2.20.25.90 1 54 3.3E-20 T 22-04-2016 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 2.1E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 433 450 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 Gene3D G3DSA:2.40.40.20 525 685 7.6E-50 T 22-04-2016 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 PANTHER PTHR11615 1 704 2.5E-262 T 22-04-2016 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 Pfam PF00384 Molybdopterin oxidoreductase 61 486 3.0E-93 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 Gene3D G3DSA:1.20.5.460 688 713 1.6E-5 T 22-04-2016 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 SMART SM00926 1 54 2.4E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 Gene3D G3DSA:3.40.228.10 144 373 1.9E-78 T 22-04-2016 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 Gene3D G3DSA:3.40.50.740 384 491 1.7E-48 T 22-04-2016 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 Gene3D G3DSA:3.40.50.740 62 143 1.7E-48 T 22-04-2016 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 6 684 4.4E-270 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 SUPERFAMILY SSF53706 1 561 2.62E-196 T 22-04-2016 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 Pfam PF01568 Molydopterin dinucleotide binding domain 574 681 1.3E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 PANTHER PTHR11615:SF112 1 704 2.5E-262 T 22-04-2016 YPO0344 255bbf0b5fca84ef80a47b25c3ac9306 715 SUPERFAMILY SSF50692 564 700 3.84E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.1E-20 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 8.5E-58 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 Gene3D G3DSA:2.30.130.10 250 311 5.2E-29 T 22-04-2016 IPR015947 PUA-like domain YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 PANTHER PTHR13767:SF2 3 309 6.9E-137 T 22-04-2016 YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 SUPERFAMILY SSF55120 10 248 2.27E-82 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 248 6.6E-24 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.986 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 5.8E-90 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 SUPERFAMILY SSF88697 251 310 2.14E-14 T 22-04-2016 IPR015947 PUA-like domain YPO3494 948a5b3e5c784e1f6798eeeaee647990 324 PANTHER PTHR13767 3 309 6.9E-137 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3938 463bc1aa5cef125d8090645550f6ba5e 815 PANTHER PTHR11468:SF3 13 815 0.0 T 22-04-2016 YPO3938 463bc1aa5cef125d8090645550f6ba5e 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPO3938 463bc1aa5cef125d8090645550f6ba5e 815 SUPERFAMILY SSF53756 12 814 0.0 T 22-04-2016 YPO3938 463bc1aa5cef125d8090645550f6ba5e 815 Gene3D G3DSA:3.40.50.2000 480 795 1.6E-140 T 22-04-2016 YPO3938 463bc1aa5cef125d8090645550f6ba5e 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPO3938 463bc1aa5cef125d8090645550f6ba5e 815 PIRSF PIRSF000460 2 815 1.2E-231 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPO3938 463bc1aa5cef125d8090645550f6ba5e 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPO3938 463bc1aa5cef125d8090645550f6ba5e 815 PANTHER PTHR11468 13 815 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YPO3938 463bc1aa5cef125d8090645550f6ba5e 815 Gene3D G3DSA:3.40.50.2000 13 479 9.1E-207 T 22-04-2016 YPO0157 754c939f3d92a6c590a72990464e1960 346 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 15 342 3.1E-117 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPO0157 754c939f3d92a6c590a72990464e1960 346 PANTHER PTHR10055:SF10 5 346 2.2E-192 T 22-04-2016 YPO0157 754c939f3d92a6c590a72990464e1960 346 Gene3D G3DSA:1.10.240.10 218 336 6.1E-20 T 22-04-2016 YPO0157 754c939f3d92a6c590a72990464e1960 346 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 15 343 42.767 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 YPO0157 754c939f3d92a6c590a72990464e1960 346 PANTHER PTHR10055 5 346 2.2E-192 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPO0157 754c939f3d92a6c590a72990464e1960 346 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 24 33 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0157 754c939f3d92a6c590a72990464e1960 346 Gene3D G3DSA:3.40.50.620 16 217 8.3E-91 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0157 754c939f3d92a6c590a72990464e1960 346 SUPERFAMILY SSF52374 17 342 7.24E-100 T 22-04-2016 YPO0157 754c939f3d92a6c590a72990464e1960 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 28 44 2.9E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPO0157 754c939f3d92a6c590a72990464e1960 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 207 217 2.9E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPO0157 754c939f3d92a6c590a72990464e1960 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 154 175 2.9E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPO0157 754c939f3d92a6c590a72990464e1960 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 78 97 2.9E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YPO0157 754c939f3d92a6c590a72990464e1960 346 Pfam PF00579 tRNA synthetases class I (W and Y) 15 297 2.7E-87 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:3.40.50.300 245 331 2.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:3.40.50.300 3 110 2.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 SMART SM01086 335 434 4.5E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 SUPERFAMILY SSF52540 3 441 1.1E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 SMART SM00382 49 332 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.4E-231 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 PANTHER PTHR11262 218 443 2.9E-213 T 22-04-2016 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 PANTHER PTHR11262 1 105 2.9E-213 T 22-04-2016 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.688 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 2.2E-41 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:1.10.8.60 335 443 3.1E-36 T 22-04-2016 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 102 9.4E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 1.2E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 PANTHER PTHR11262:SF3 218 443 2.9E-213 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 PANTHER PTHR11262:SF3 1 105 2.9E-213 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:1.10.8.10 111 177 3.7E-34 T 22-04-2016 YPO0105 64bdcba2a5f0d7fc04186d55ad4e3b6a 443 Gene3D G3DSA:1.10.8.10 213 243 3.7E-34 T 22-04-2016 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 767 6.0E-31 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 SUPERFAMILY SSF52540 189 504 4.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0506 6f4e77b232bfb254599886b7d60fad44 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 231 364 1.0E-10 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 PANTHER PTHR11638:SF122 3 149 0.0 T 22-04-2016 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 PANTHER PTHR11638:SF122 183 866 0.0 T 22-04-2016 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 Gene3D G3DSA:3.40.50.300 554 793 5.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0506 6f4e77b232bfb254599886b7d60fad44 867 Gene3D G3DSA:1.10.1780.10 13 134 8.4E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 28 78 2.7E-7 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 21 855 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 Gene3D G3DSA:3.40.50.300 189 369 3.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0506 6f4e77b232bfb254599886b7d60fad44 867 SUPERFAMILY SSF52540 550 843 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0506 6f4e77b232bfb254599886b7d60fad44 867 SUPERFAMILY SSF81923 18 134 9.81E-18 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 PANTHER PTHR11638 3 149 0.0 T 22-04-2016 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 PANTHER PTHR11638 183 866 0.0 T 22-04-2016 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 9.9E-23 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 9.9E-23 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 9.9E-23 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 9.9E-23 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 SMART SM01086 772 864 0.0094 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO0506 6f4e77b232bfb254599886b7d60fad44 867 Gene3D G3DSA:1.10.8.60 373 455 1.0E-25 T 22-04-2016 YPO0506 6f4e77b232bfb254599886b7d60fad44 867 SMART SM00382 226 371 5.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0506 6f4e77b232bfb254599886b7d60fad44 867 SMART SM00382 601 758 2.9E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3415 00e46d914030713f81c48e646172aa9e 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPO3415 00e46d914030713f81c48e646172aa9e 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 4.0E-67 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPO3415 00e46d914030713f81c48e646172aa9e 865 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPO3415 00e46d914030713f81c48e646172aa9e 865 SUPERFAMILY SSF52016 163 372 1.12E-72 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO3415 00e46d914030713f81c48e646172aa9e 865 PANTHER PTHR11670:SF39 305 860 0.0 T 22-04-2016 YPO3415 00e46d914030713f81c48e646172aa9e 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO3415 00e46d914030713f81c48e646172aa9e 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO3415 00e46d914030713f81c48e646172aa9e 865 SUPERFAMILY SSF74778 2 160 6.54E-68 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPO3415 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.30.499.10 402 519 4.9E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO3415 00e46d914030713f81c48e646172aa9e 865 SUPERFAMILY SSF53732 379 859 2.09E-150 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO3415 00e46d914030713f81c48e646172aa9e 865 PANTHER PTHR11670 305 860 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO3415 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.40.1060.10 520 682 8.8E-86 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO3415 00e46d914030713f81c48e646172aa9e 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.7E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO3415 00e46d914030713f81c48e646172aa9e 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.6E-97 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YPO3415 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.30.499.10 684 859 4.3E-55 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO3415 00e46d914030713f81c48e646172aa9e 865 Gene3D G3DSA:3.20.19.10 162 360 1.2E-94 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO2640 c0fac093a306f107c0672fd50f00c830 87 PANTHER PTHR33609:SF1 1 86 5.9E-51 T 22-04-2016 YPO2640 c0fac093a306f107c0672fd50f00c830 87 Pfam PF01527 Transposase 2 70 2.9E-23 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YPO2640 c0fac093a306f107c0672fd50f00c830 87 Gene3D G3DSA:1.10.10.60 7 83 8.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2640 c0fac093a306f107c0672fd50f00c830 87 SUPERFAMILY SSF46689 1 72 2.33E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2640 c0fac093a306f107c0672fd50f00c830 87 PANTHER PTHR33609 1 86 5.9E-51 T 22-04-2016 YPO1716 95681d325efac4db3493d528234fc3b1 465 PANTHER PTHR11958 20 461 5.3E-275 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1716 95681d325efac4db3493d528234fc3b1 465 PRINTS PR00173 Glutamate-aspartate symporter signature 29 49 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1716 95681d325efac4db3493d528234fc3b1 465 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1716 95681d325efac4db3493d528234fc3b1 465 PRINTS PR00173 Glutamate-aspartate symporter signature 107 132 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1716 95681d325efac4db3493d528234fc3b1 465 PRINTS PR00173 Glutamate-aspartate symporter signature 77 97 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1716 95681d325efac4db3493d528234fc3b1 465 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1716 95681d325efac4db3493d528234fc3b1 465 PRINTS PR00173 Glutamate-aspartate symporter signature 184 206 1.4E-26 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1716 95681d325efac4db3493d528234fc3b1 465 Pfam PF00375 Sodium:dicarboxylate symporter family 31 444 6.1E-105 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1716 95681d325efac4db3493d528234fc3b1 465 PANTHER PTHR11958:SF5 20 461 5.3E-275 T 22-04-2016 YPO1716 95681d325efac4db3493d528234fc3b1 465 Gene3D G3DSA:1.10.3860.10 25 451 1.9E-104 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1716 95681d325efac4db3493d528234fc3b1 465 SUPERFAMILY SSF118215 31 444 1.2E-98 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 SUPERFAMILY SSF53474 421 662 4.32E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 PANTHER PTHR11757 1 683 0.0 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 411 1.6E-101 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 Pfam PF00326 Prolyl oligopeptidase family 470 681 4.4E-70 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 SUPERFAMILY SSF50993 1 413 3.92E-91 T 22-04-2016 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 Gene3D G3DSA:2.130.10.120 76 414 6.0E-103 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 PANTHER PTHR11757:SF3 1 683 0.0 T 22-04-2016 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 Gene3D G3DSA:3.40.50.1820 423 665 1.1E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 507 526 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 453 471 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 537 557 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 595 610 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 613 635 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPO1780 fb1314f9c69db27e45abeb0da603c81f 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 479 503 9.1E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YPO0088 17b0be28a137300dfb515938c0db90db 248 PANTHER PTHR19370 4 227 5.2E-100 T 22-04-2016 YPO0088 17b0be28a137300dfb515938c0db90db 248 SUPERFAMILY SSF52343 104 248 2.62E-38 T 22-04-2016 YPO0088 17b0be28a137300dfb515938c0db90db 248 Gene3D G3DSA:2.40.30.10 2 96 9.2E-27 T 22-04-2016 YPO0088 17b0be28a137300dfb515938c0db90db 248 PANTHER PTHR19370:SF98 4 227 5.2E-100 T 22-04-2016 YPO0088 17b0be28a137300dfb515938c0db90db 248 Gene3D G3DSA:3.40.50.80 97 248 7.5E-47 T 22-04-2016 YPO0088 17b0be28a137300dfb515938c0db90db 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 5.4E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPO0088 17b0be28a137300dfb515938c0db90db 248 Pfam PF00970 Oxidoreductase FAD-binding domain 19 90 3.9E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPO0088 17b0be28a137300dfb515938c0db90db 248 SUPERFAMILY SSF63380 3 99 8.78E-23 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO1025 ff52386c64c21d019550d29ead4a2d38 390 Gene3D G3DSA:2.40.40.10 78 163 1.1E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPO1025 ff52386c64c21d019550d29ead4a2d38 390 Gene3D G3DSA:2.40.40.10 168 356 8.6E-48 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPO1025 ff52386c64c21d019550d29ead4a2d38 390 SMART SM00925 125 259 7.8E-75 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 YPO1025 ff52386c64c21d019550d29ead4a2d38 390 Pfam PF03562 MltA specific insert domain 103 259 2.9E-42 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 YPO1025 ff52386c64c21d019550d29ead4a2d38 390 PANTHER PTHR30124:SF0 1 388 6.4E-165 T 22-04-2016 YPO1025 ff52386c64c21d019550d29ead4a2d38 390 PANTHER PTHR30124 1 388 6.4E-165 T 22-04-2016 YPO1025 ff52386c64c21d019550d29ead4a2d38 390 Pfam PF06725 3D domain 279 356 4.7E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 YPO1025 ff52386c64c21d019550d29ead4a2d38 390 PIRSF PIRSF019422 1 367 8.6E-88 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A YPO1025 ff52386c64c21d019550d29ead4a2d38 390 SUPERFAMILY SSF50685 25 355 7.32E-111 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 0.0 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 6.3E-36 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 SUPERFAMILY SSF55957 432 543 5.49E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 Gene3D G3DSA:3.40.120.10 29 225 2.7E-60 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 488 538 1.4E-7 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 Gene3D G3DSA:3.40.120.10 310 443 4.0E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 SUPERFAMILY SSF53738 26 235 3.06E-51 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 7.8E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 PANTHER PTHR22573:SF52 18 547 1.1E-299 T 22-04-2016 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 Gene3D G3DSA:3.40.120.10 226 309 2.9E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 5.2E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 SUPERFAMILY SSF53738 305 446 6.77E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 SUPERFAMILY SSF53738 209 317 1.06E-8 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 PANTHER PTHR22573 18 547 1.1E-299 T 22-04-2016 YPO2686 8ebee937d83f111eeaadb1234b76ec7f 547 Gene3D G3DSA:3.30.310.50 466 544 2.1E-29 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 9.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 Pfam PF00672 HAMP domain 185 250 4.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 Gene3D G3DSA:1.10.287.130 258 315 4.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 Pfam PF14827 Double sensory domain of two-component sensor kinase 55 168 2.5E-6 T 22-04-2016 IPR029150 Double Cache domain 3 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 SUPERFAMILY SSF103190 56 170 1.1E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 SUPERFAMILY SSF47384 254 319 1.22E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 PANTHER PTHR24423 56 133 1.2E-65 T 22-04-2016 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 PANTHER PTHR24423 5 13 1.2E-65 T 22-04-2016 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 PANTHER PTHR24423 198 472 1.2E-65 T 22-04-2016 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 SMART SM00387 364 472 5.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 472 1.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 Gene3D G3DSA:3.30.450.20 91 168 4.4E-4 T 22-04-2016 YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 Gene3D G3DSA:3.30.565.10 320 472 7.2E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 SUPERFAMILY SSF55874 311 472 5.24E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0895 f98e4a7d175d786ea793f409e6d1220f 472 SMART SM00388 255 320 2.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO1450a 1de545df46b5ae564bba8ad01b8b91c9 101 Gene3D G3DSA:3.30.420.10 3 75 3.7E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1450a 1de545df46b5ae564bba8ad01b8b91c9 101 SUPERFAMILY SSF53098 3 73 4.93E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1450a 1de545df46b5ae564bba8ad01b8b91c9 101 Pfam PF13610 DDE domain 3 91 5.7E-30 T 22-04-2016 IPR032874 DDE domain YPO1412 578d5548b3219df4688d269372e5ba47 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 7.2E-209 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 SUPERFAMILY SSF55681 104 464 3.98E-96 T 22-04-2016 YPO1412 578d5548b3219df4688d269372e5ba47 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.1E-11 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YPO1412 578d5548b3219df4688d269372e5ba47 466 Gene3D G3DSA:3.30.930.10 109 462 7.1E-113 T 22-04-2016 YPO1412 578d5548b3219df4688d269372e5ba47 466 PANTHER PTHR22594 8 180 1.3E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 PANTHER PTHR22594 199 464 1.3E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 PANTHER PTHR22594:SF6 8 180 1.3E-252 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 PANTHER PTHR22594:SF6 199 464 1.3E-252 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 SUPERFAMILY SSF50249 14 102 4.07E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1412 578d5548b3219df4688d269372e5ba47 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.548 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YPO1412 578d5548b3219df4688d269372e5ba47 466 Gene3D G3DSA:2.40.50.140 14 104 2.5E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1412 578d5548b3219df4688d269372e5ba47 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 5.0E-83 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1381 b0946fafda6e44c5c25ee666e72833c2 244 SUPERFAMILY SSF102114 21 211 1.14E-22 T 22-04-2016 YPO1381 b0946fafda6e44c5c25ee666e72833c2 244 Pfam PF04055 Radical SAM superfamily 22 176 4.7E-31 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO1381 b0946fafda6e44c5c25ee666e72833c2 244 PANTHER PTHR30352:SF9 1 244 5.2E-155 T 22-04-2016 YPO1381 b0946fafda6e44c5c25ee666e72833c2 244 ProSitePatterns PS01087 Radical activating enzymes signature. 16 37 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 YPO1381 b0946fafda6e44c5c25ee666e72833c2 244 PANTHER PTHR30352 1 244 5.2E-155 T 22-04-2016 YPO1381 b0946fafda6e44c5c25ee666e72833c2 244 Gene3D G3DSA:3.80.30.10 67 244 7.7E-68 T 22-04-2016 YPO1381 b0946fafda6e44c5c25ee666e72833c2 244 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 4 236 2.1E-106 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 YPO1381 b0946fafda6e44c5c25ee666e72833c2 244 Pfam PF13353 4Fe-4S single cluster domain 14 123 8.0E-18 T 22-04-2016 YPO0716 46749ca8d36089c245dc23af6d3a0215 239 PANTHER PTHR34982 1 239 1.1E-66 T 22-04-2016 YPO0716 46749ca8d36089c245dc23af6d3a0215 239 Pfam PF09811 Essential protein Yae1, N terminal 50 87 1.9E-9 T 22-04-2016 IPR019191 Essential protein Yae1, N-terminal YPO0716 46749ca8d36089c245dc23af6d3a0215 239 PANTHER PTHR34982:SF1 1 239 1.1E-66 T 22-04-2016 YPO0716 46749ca8d36089c245dc23af6d3a0215 239 Pfam PF02108 Flagellar assembly protein FliH 101 224 5.9E-30 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPO3749 3122d49df73954aa91c8d607ffb1baa0 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.403 T 22-04-2016 IPR022973 Ribosomal protein L10 YPO3749 3122d49df73954aa91c8d607ffb1baa0 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3749 3122d49df73954aa91c8d607ffb1baa0 165 SUPERFAMILY SSF160369 4 162 4.71E-48 T 22-04-2016 YPO3749 3122d49df73954aa91c8d607ffb1baa0 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 157 6.0E-4 T 22-04-2016 YPO3749 3122d49df73954aa91c8d607ffb1baa0 165 PANTHER PTHR11560 1 165 1.4E-61 T 22-04-2016 YPO3749 3122d49df73954aa91c8d607ffb1baa0 165 Pfam PF00466 Ribosomal protein L10 6 101 2.2E-25 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 YPO1632 8370d0d704f54f18922204e75c25c446 373 SMART SM00558 87 215 2.2E-9 T 22-04-2016 IPR003347 JmjC domain YPO1632 8370d0d704f54f18922204e75c25c446 373 Pfam PF08007 Cupin superfamily protein 10 310 4.4E-101 T 22-04-2016 IPR003347 JmjC domain YPO1632 8370d0d704f54f18922204e75c25c446 373 Gene3D G3DSA:2.60.120.650 6 205 2.5E-44 T 22-04-2016 YPO1632 8370d0d704f54f18922204e75c25c446 373 PANTHER PTHR13096 7 353 7.9E-79 T 22-04-2016 YPO1632 8370d0d704f54f18922204e75c25c446 373 SUPERFAMILY SSF51197 7 289 1.15E-74 T 22-04-2016 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 PANTHER PTHR21000:SF11 406 616 0.0 T 22-04-2016 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 8.2E-261 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 SUPERFAMILY SSF52016 421 610 4.0E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 SUPERFAMILY SSF143975 3 420 4.05E-132 T 22-04-2016 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 PANTHER PTHR21000 406 616 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 Pfam PF00920 Dehydratase family 34 607 2.4E-214 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3897 ee69eae297ecb80c1757c5914372b0ca 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.006 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO2505 d338f55e10d46545b14c747fee601027 312 Pfam PF01545 Cation efflux family 22 221 5.7E-34 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO2505 d338f55e10d46545b14c747fee601027 312 SUPERFAMILY SSF161111 16 223 1.07E-34 T 22-04-2016 YPO2505 d338f55e10d46545b14c747fee601027 312 PANTHER PTHR11562 9 311 2.5E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO2505 d338f55e10d46545b14c747fee601027 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 288 2.6E-24 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO2505 d338f55e10d46545b14c747fee601027 312 Gene3D G3DSA:1.20.1510.10 19 221 3.1E-26 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain YPO2505 d338f55e10d46545b14c747fee601027 312 PANTHER PTHR11562:SF17 9 311 2.5E-43 T 22-04-2016 YPO0974 020e3f3f3f7905833a7503a2759efcf2 578 PANTHER PTHR30128 6 578 0.0 T 22-04-2016 YPO0974 020e3f3f3f7905833a7503a2759efcf2 578 Pfam PF00691 OmpA family 447 543 6.3E-15 T 22-04-2016 IPR006665 OmpA-like domain YPO0974 020e3f3f3f7905833a7503a2759efcf2 578 SUPERFAMILY SSF103088 427 548 2.22E-29 T 22-04-2016 IPR006665 OmpA-like domain YPO0974 020e3f3f3f7905833a7503a2759efcf2 578 Gene3D G3DSA:3.30.1330.60 434 551 1.1E-29 T 22-04-2016 IPR006665 OmpA-like domain YPO0974 020e3f3f3f7905833a7503a2759efcf2 578 PANTHER PTHR30128:SF11 6 578 0.0 T 22-04-2016 YPO1637 d77ce8c2a30afceac3c53d8bab2f3371 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 4.0E-105 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPO1637 d77ce8c2a30afceac3c53d8bab2f3371 208 PANTHER PTHR38100 2 208 5.3E-105 T 22-04-2016 YPO1637 d77ce8c2a30afceac3c53d8bab2f3371 208 Gene3D G3DSA:1.10.3890.10 2 207 1.5E-87 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPO1637 d77ce8c2a30afceac3c53d8bab2f3371 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 1.6E-77 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPO1637 d77ce8c2a30afceac3c53d8bab2f3371 208 SUPERFAMILY SSF101322 2 207 2.88E-82 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPO1637 d77ce8c2a30afceac3c53d8bab2f3371 208 PANTHER PTHR38100:SF1 2 208 5.3E-105 T 22-04-2016 YPO1637 d77ce8c2a30afceac3c53d8bab2f3371 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 36.962 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 106.255 T 22-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 SUPERFAMILY SSF48498 83 194 3.02E-21 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 PANTHER PTHR30055 1 196 5.4E-135 T 22-04-2016 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 Gene3D G3DSA:1.10.357.10 2 192 1.2E-49 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 5.2E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 9.7E-80 T 22-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 Pfam PF13977 Bacterial transcriptional repressor 84 192 3.1E-34 T 22-04-2016 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.8E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.8E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 PANTHER PTHR30055:SF61 1 196 5.4E-135 T 22-04-2016 YPO1167 29924ab08b2947524e13f5bc1a84a2e6 198 SUPERFAMILY SSF46689 6 78 2.31E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 Gene3D G3DSA:3.40.50.920 538 663 2.2E-52 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 SUPERFAMILY SSF52922 533 664 8.25E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 PANTHER PTHR11624 334 663 0.0 T 22-04-2016 IPR033247 Transketolase family YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 PANTHER PTHR11624 1 310 0.0 T 22-04-2016 IPR033247 Transketolase family YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 PANTHER PTHR11624:SF85 334 663 0.0 T 22-04-2016 YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 PANTHER PTHR11624:SF85 1 310 0.0 T 22-04-2016 YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 SUPERFAMILY SSF52518 5 321 1.23E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.3E-170 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 Pfam PF02779 Transketolase, pyrimidine binding domain 355 524 1.8E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 Pfam PF02780 Transketolase, C-terminal domain 540 655 5.8E-20 T 22-04-2016 IPR033248 Transketolase, C-terminal domain YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 SMART SM00861 355 525 1.5E-68 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 SUPERFAMILY SSF52518 334 526 1.36E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 Gene3D G3DSA:3.40.50.970 4 322 9.8E-135 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 Gene3D G3DSA:3.40.50.970 328 533 7.7E-82 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO0926 aada8f5f87fffd9fcf472010b6138a40 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 YPO3696 5b39ca157dae606654a1865590905ddc 555 SUPERFAMILY SSF51011 477 553 1.5E-17 T 22-04-2016 YPO3696 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:3.90.400.10 107 177 1.6E-28 T 22-04-2016 YPO3696 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:2.60.40.1180 478 552 2.3E-20 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YPO3696 5b39ca157dae606654a1865590905ddc 555 Pfam PF00128 Alpha amylase, catalytic domain 30 374 2.0E-121 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO3696 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357 1 388 7.7E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO3696 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357 453 553 7.7E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO3696 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357 409 421 7.7E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO3696 5b39ca157dae606654a1865590905ddc 555 SMART SM00642 15 416 7.3E-154 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO3696 5b39ca157dae606654a1865590905ddc 555 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 552 2.9E-248 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 YPO3696 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357:SF142 1 388 7.7E-251 T 22-04-2016 YPO3696 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357:SF142 453 553 7.7E-251 T 22-04-2016 YPO3696 5b39ca157dae606654a1865590905ddc 555 PANTHER PTHR10357:SF142 409 421 7.7E-251 T 22-04-2016 YPO3696 5b39ca157dae606654a1865590905ddc 555 Pfam PF11941 Domain of unknown function (DUF3459) 461 536 8.6E-5 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) YPO3696 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:3.20.20.80 5 106 2.0E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO3696 5b39ca157dae606654a1865590905ddc 555 Gene3D G3DSA:3.20.20.80 178 475 2.0E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO3696 5b39ca157dae606654a1865590905ddc 555 SUPERFAMILY SSF51445 5 474 4.37E-151 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 SUPERFAMILY SSF52540 4 224 3.52E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 SMART SM00382 291 497 6.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 SMART SM00382 30 251 1.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 PANTHER PTHR24220 7 391 4.5E-242 T 22-04-2016 YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 Gene3D G3DSA:3.40.50.300 2 225 1.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 PANTHER PTHR24220:SF516 7 391 4.5E-242 T 22-04-2016 YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 SUPERFAMILY SSF52540 278 494 1.55E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 Pfam PF00005 ABC transporter 21 172 2.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 Pfam PF00005 ABC transporter 282 437 2.8E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2582 3f178c642c1c1c9544a91f5fbb7d1570 515 Gene3D G3DSA:3.40.50.300 255 499 9.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2519 71d5a4184022804a6dbea7beab99c066 336 PANTHER PTHR13393:SF0 13 330 7.6E-141 T 22-04-2016 YPO2519 71d5a4184022804a6dbea7beab99c066 336 PIRSF PIRSF029038 15 335 3.6E-153 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 YPO2519 71d5a4184022804a6dbea7beab99c066 336 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 26 325 53.667 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 YPO2519 71d5a4184022804a6dbea7beab99c066 336 PANTHER PTHR13393 13 330 7.6E-141 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 YPO2519 71d5a4184022804a6dbea7beab99c066 336 Pfam PF05971 Protein of unknown function (DUF890) 25 322 3.1E-121 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 YPO2519 71d5a4184022804a6dbea7beab99c066 336 SUPERFAMILY SSF53335 63 321 8.02E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2519 71d5a4184022804a6dbea7beab99c066 336 Gene3D G3DSA:3.40.50.150 128 233 2.7E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3520 272872a8776308ce044d6c4bebb503d9 337 SUPERFAMILY SSF56655 2 327 1.23E-109 T 22-04-2016 YPO3520 272872a8776308ce044d6c4bebb503d9 337 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 YPO3520 272872a8776308ce044d6c4bebb503d9 337 PIRSF PIRSF500210 1 332 5.2E-124 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 41.871 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 3.3E-77 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 2.6E-72 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 2.6E-72 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 2.6E-72 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 2.6E-72 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 2.6E-72 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 2.6E-72 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 Gene3D G3DSA:3.30.540.10 2 194 3.5E-76 T 22-04-2016 YPO3520 272872a8776308ce044d6c4bebb503d9 337 PIRSF PIRSF000904 1 333 3.5E-121 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 PANTHER PTHR11556 1 336 2.0E-183 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 YPO3520 272872a8776308ce044d6c4bebb503d9 337 Gene3D G3DSA:3.40.190.80 197 329 3.1E-56 T 22-04-2016 YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 Pfam PF01026 TatD related DNase 4 255 1.9E-76 T 22-04-2016 IPR001130 TatD family GO:0016788 YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 PANTHER PTHR10060 1 258 7.4E-140 T 22-04-2016 IPR001130 TatD family GO:0016788 YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 SUPERFAMILY SSF51556 1 259 6.43E-86 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 Gene3D G3DSA:3.20.20.140 2 257 9.4E-85 T 22-04-2016 YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 4.3E-92 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 PIRSF PIRSF005902 1 259 9.0E-73 T 22-04-2016 IPR001130 TatD family GO:0016788 YPO1607 5d84072c28e831e740c7f984a2cdbe1b 269 PANTHER PTHR10060:SF20 1 258 7.4E-140 T 22-04-2016 YPO2779 c7fbcc0cb1a136a7bf846da56b9e7661 232 SUPERFAMILY SSF141868 16 228 4.05E-21 T 22-04-2016 IPR001633 EAL domain YPO2779 c7fbcc0cb1a136a7bf846da56b9e7661 232 PANTHER PTHR33121:SF6 10 220 8.3E-103 T 22-04-2016 YPO2779 c7fbcc0cb1a136a7bf846da56b9e7661 232 SMART SM00052 3 225 4.0E-6 T 22-04-2016 IPR001633 EAL domain YPO2779 c7fbcc0cb1a136a7bf846da56b9e7661 232 Pfam PF00563 EAL domain 17 220 8.7E-14 T 22-04-2016 IPR001633 EAL domain YPO2779 c7fbcc0cb1a136a7bf846da56b9e7661 232 Gene3D G3DSA:3.20.20.450 17 227 1.5E-16 T 22-04-2016 IPR001633 EAL domain YPO2779 c7fbcc0cb1a136a7bf846da56b9e7661 232 PANTHER PTHR33121 10 220 8.3E-103 T 22-04-2016 YPO3498 8a1dd549e4f934150cdac4c7132a5caa 150 PANTHER PTHR33867:SF1 1 150 7.5E-59 T 22-04-2016 YPO3498 8a1dd549e4f934150cdac4c7132a5caa 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 24.064 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 YPO3498 8a1dd549e4f934150cdac4c7132a5caa 150 Gene3D G3DSA:3.30.300.70 2 79 9.6E-33 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal YPO3498 8a1dd549e4f934150cdac4c7132a5caa 150 Gene3D G3DSA:2.30.30.180 87 147 1.2E-12 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal YPO3498 8a1dd549e4f934150cdac4c7132a5caa 150 Pfam PF02576 Putative ribosome maturation factor RimP 11 146 1.6E-48 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 YPO3498 8a1dd549e4f934150cdac4c7132a5caa 150 SUPERFAMILY SSF75420 3 82 1.7E-24 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal YPO3498 8a1dd549e4f934150cdac4c7132a5caa 150 SUPERFAMILY SSF74942 83 150 1.22E-16 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal YPO3498 8a1dd549e4f934150cdac4c7132a5caa 150 PANTHER PTHR33867 1 150 7.5E-59 T 22-04-2016 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 632 26.091 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 SUPERFAMILY SSF118116 453 631 1.96E-43 T 22-04-2016 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 2.2E-38 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 SUPERFAMILY SSF54211 191 330 4.55E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.9E-12 T 22-04-2016 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 Gene3D G3DSA:3.30.230.10 218 328 9.6E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.2E-102 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 SMART SM00853 458 593 8.2E-15 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 SUPERFAMILY SSF55874 1 204 1.17E-56 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 Pfam PF08676 MutL C terminal dimerisation domain 455 584 1.9E-26 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 SMART SM01340 212 330 7.6E-57 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 PANTHER PTHR10073 3 395 3.7E-162 T 22-04-2016 YPO0371 acc6b6b5fa8b146f67ed9725f3e56c01 635 Gene3D G3DSA:3.30.565.10 2 207 1.1E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 Gene3D G3DSA:3.30.1330.10 28 162 9.1E-32 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 PANTHER PTHR10256 1 347 1.3E-171 T 22-04-2016 YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 339 5.6E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 1.9E-136 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.623 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 PIRSF PIRSF036407 1 347 1.3E-118 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 SUPERFAMILY SSF56042 164 339 1.94E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 SUPERFAMILY SSF55326 7 160 1.33E-40 T 22-04-2016 YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 Gene3D G3DSA:3.90.650.10 176 344 8.9E-17 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2164 61f0e6d8d42acb9d4f0e80748449b526 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 1.1E-18 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPO1361 f7ce7ff0a084511abc7051a4400a7ad2 298 PANTHER PTHR35804 2 298 1.2E-100 T 22-04-2016 YPO1361 f7ce7ff0a084511abc7051a4400a7ad2 298 PANTHER PTHR35804:SF1 2 298 1.2E-100 T 22-04-2016 YPO1361 f7ce7ff0a084511abc7051a4400a7ad2 298 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 137 296 8.0E-68 T 22-04-2016 IPR005642 Lysine exporter LysO YPO1361 f7ce7ff0a084511abc7051a4400a7ad2 298 Pfam PF03956 Membrane protein of unknown function (DUF340) 113 297 2.5E-56 T 22-04-2016 IPR005642 Lysine exporter LysO YPO2020 ebc4341aa1df9cfc44a0ddb2bbe78611 269 Gene3D G3DSA:1.25.40.10 188 258 7.7E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2020 ebc4341aa1df9cfc44a0ddb2bbe78611 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 2.0E-44 T 22-04-2016 IPR032698 Protein SirB1, N-terminal YPO2020 ebc4341aa1df9cfc44a0ddb2bbe78611 269 PANTHER PTHR31350 24 265 3.2E-61 T 22-04-2016 YPO2020 ebc4341aa1df9cfc44a0ddb2bbe78611 269 Pfam PF13371 Tetratricopeptide repeat 187 258 2.7E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2020 ebc4341aa1df9cfc44a0ddb2bbe78611 269 SUPERFAMILY SSF48452 190 258 1.92E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3362 1251447bf4ef911a32b51277abc58921 106 PANTHER PTHR37485:SF1 2 106 4.1E-55 T 22-04-2016 YPO3362 1251447bf4ef911a32b51277abc58921 106 PANTHER PTHR37485 2 106 4.1E-55 T 22-04-2016 YPO3362 1251447bf4ef911a32b51277abc58921 106 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.701 T 22-04-2016 IPR023081 Cell division protein FtsB YPO3362 1251447bf4ef911a32b51277abc58921 106 Pfam PF04977 Septum formation initiator 11 89 6.8E-30 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 YPO1366 147e3fca95c482f620fabf69995d72dd 87 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site YPO1366 147e3fca95c482f620fabf69995d72dd 87 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 9.2E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1366 147e3fca95c482f620fabf69995d72dd 87 PANTHER PTHR11544:SF52 1 86 6.8E-56 T 22-04-2016 YPO1366 147e3fca95c482f620fabf69995d72dd 87 SUPERFAMILY SSF50249 1 66 1.2E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1366 147e3fca95c482f620fabf69995d72dd 87 Gene3D G3DSA:2.40.50.140 1 64 7.6E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1366 147e3fca95c482f620fabf69995d72dd 87 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 6.2E-41 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 YPO1366 147e3fca95c482f620fabf69995d72dd 87 PRINTS PR00050 Cold shock protein signature 25 34 1.0E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1366 147e3fca95c482f620fabf69995d72dd 87 PRINTS PR00050 Cold shock protein signature 40 58 1.0E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1366 147e3fca95c482f620fabf69995d72dd 87 PRINTS PR00050 Cold shock protein signature 4 19 1.0E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1366 147e3fca95c482f620fabf69995d72dd 87 PANTHER PTHR11544 1 86 6.8E-56 T 22-04-2016 YPO1366 147e3fca95c482f620fabf69995d72dd 87 SMART SM00357 3 67 2.1E-28 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 Gene3D G3DSA:3.40.50.300 454 638 9.1E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 SUPERFAMILY SSF50249 9 176 4.97E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 19 52 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 299 603 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 655 689 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 163 187 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031:SF249 205 282 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 6.7E-18 T 22-04-2016 IPR001650 Helicase, C-terminal YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 Pfam PF00270 DEAD/DEAH box helicase 271 431 6.8E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 SUPERFAMILY SSF52540 508 653 5.91E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 SUPERFAMILY SSF52540 292 342 5.91E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 SMART SM00490 505 589 1.5E-21 T 22-04-2016 IPR001650 Helicase, C-terminal YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 Gene3D G3DSA:2.40.50.140 47 139 1.9E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 19 52 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 299 603 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 655 689 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 163 187 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 PANTHER PTHR24031 205 282 1.8E-124 T 22-04-2016 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 SMART SM00487 265 459 5.3E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 4.2E-244 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 Gene3D G3DSA:3.40.50.300 254 453 7.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 SUPERFAMILY SSF52540 208 453 2.13E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 Pfam PF17191 RecG wedge domain 14 172 1.1E-22 T 22-04-2016 IPR033454 RecG, wedge domain YPO0036 8e574f222ac27b6b76bb32cb52a595e8 693 Gene3D G3DSA:1.10.150.20 5 37 3.5E-4 T 22-04-2016 YPO0028 4a451af9cf9127facba6a8dcf3d4dd7f 294 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 4 294 23.185 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial YPO0028 4a451af9cf9127facba6a8dcf3d4dd7f 294 Pfam PF03631 Virulence factor BrkB 29 276 2.5E-54 T 22-04-2016 IPR017039 Virulence factor BrkB YPO0028 4a451af9cf9127facba6a8dcf3d4dd7f 294 PANTHER PTHR30213 1 293 3.8E-113 T 22-04-2016 YPO0028 4a451af9cf9127facba6a8dcf3d4dd7f 294 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 277 3.4E-91 T 22-04-2016 IPR017039 Virulence factor BrkB YPO0028 4a451af9cf9127facba6a8dcf3d4dd7f 294 PIRSF PIRSF035875 2 293 7.0E-62 T 22-04-2016 IPR017039 Virulence factor BrkB YPO0028 4a451af9cf9127facba6a8dcf3d4dd7f 294 PANTHER PTHR30213:SF0 1 293 3.8E-113 T 22-04-2016 YPO3556 74449291f77437e0b2380e4176fcc083 307 PANTHER PTHR11135 1 304 6.2E-153 T 22-04-2016 YPO3556 74449291f77437e0b2380e4176fcc083 307 Pfam PF04055 Radical SAM superfamily 43 202 7.4E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO3556 74449291f77437e0b2380e4176fcc083 307 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 2.1E-133 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 YPO3556 74449291f77437e0b2380e4176fcc083 307 SUPERFAMILY SSF102114 13 254 6.41E-45 T 22-04-2016 YPO3556 74449291f77437e0b2380e4176fcc083 307 Gene3D G3DSA:3.80.30.20 23 238 8.5E-33 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPO3556 74449291f77437e0b2380e4176fcc083 307 PANTHER PTHR11135:SF1 1 304 6.2E-153 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 YPO3556 74449291f77437e0b2380e4176fcc083 307 Pfam PF16199 Radical_SAM C-terminal domain 208 281 3.5E-18 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension YPO3556 74449291f77437e0b2380e4176fcc083 307 SMART SM00729 23 247 1.5E-39 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPO4005 99aec5896f0510c993b18efee7e590b5 587 PIRSF PIRSF029745 3 587 5.7E-183 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPO4005 99aec5896f0510c993b18efee7e590b5 587 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 184 533 1.1E-18 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPO4005 99aec5896f0510c993b18efee7e590b5 587 Pfam PF08479 POTRA domain, ShlB-type 90 165 1.7E-16 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPO4005 99aec5896f0510c993b18efee7e590b5 587 PANTHER PTHR34597 2 587 4.1E-275 T 22-04-2016 YPO4005 99aec5896f0510c993b18efee7e590b5 587 Gene3D G3DSA:2.40.160.50 196 587 1.9E-95 T 22-04-2016 YPO4005 99aec5896f0510c993b18efee7e590b5 587 PANTHER PTHR34597:SF2 2 587 4.1E-275 T 22-04-2016 YPO4005 99aec5896f0510c993b18efee7e590b5 587 Gene3D G3DSA:3.10.20.310 84 165 1.2E-19 T 22-04-2016 YPO3603 07cf002515a8f4e09b25317e9c7cb42c 1177 PANTHER PTHR36153 1 1177 0.0 T 22-04-2016 YPO3603 07cf002515a8f4e09b25317e9c7cb42c 1177 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 26 1174 0.0 T 22-04-2016 IPR017731 Type VI secretion system, IcmF YPO3603 07cf002515a8f4e09b25317e9c7cb42c 1177 Pfam PF14331 ImcF-related N-terminal domain 203 452 3.8E-70 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain YPO3603 07cf002515a8f4e09b25317e9c7cb42c 1177 PANTHER PTHR36153:SF1 1 1177 0.0 T 22-04-2016 YPO3603 07cf002515a8f4e09b25317e9c7cb42c 1177 SUPERFAMILY SSF52540 111 295 2.28E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3603 07cf002515a8f4e09b25317e9c7cb42c 1177 Gene3D G3DSA:3.40.50.300 133 284 5.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3603 07cf002515a8f4e09b25317e9c7cb42c 1177 Pfam PF06744 Type VI secretion protein IcmF C-terminal 929 1125 1.3E-58 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal YPO3603 07cf002515a8f4e09b25317e9c7cb42c 1177 Pfam PF06761 Intracellular multiplication and human macrophage-killing 508 821 7.9E-78 T 22-04-2016 IPR009612 ImcF-related YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 Pfam PF00175 Oxidoreductase NAD-binding domain 464 570 1.5E-20 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 Gene3D G3DSA:1.20.990.10 288 390 1.3E-37 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 606 51.752 T 22-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 SUPERFAMILY SSF52218 63 209 1.78E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 463 482 3.7E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 426 435 3.7E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 501 512 3.7E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 277 287 3.7E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 555 563 3.7E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 532 548 3.7E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 488 497 3.7E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 393 400 3.7E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 Gene3D G3DSA:3.40.50.80 462 606 1.5E-58 T 22-04-2016 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PANTHER PTHR19384 62 606 9.9E-231 T 22-04-2016 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 606 1.6E-271 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PANTHER PTHR19384:SF76 62 606 9.9E-231 T 22-04-2016 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 SUPERFAMILY SSF52343 451 606 7.07E-52 T 22-04-2016 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 Pfam PF00258 Flavodoxin 67 195 2.0E-31 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 Gene3D G3DSA:3.40.50.360 59 210 6.4E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PIRSF PIRSF000207 1 606 9.3E-275 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 SUPERFAMILY SSF63380 234 453 1.53E-63 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00369 Flavodoxin signature 169 188 4.0E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00369 Flavodoxin signature 113 124 4.0E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00369 Flavodoxin signature 65 78 4.0E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 PRINTS PR00369 Flavodoxin signature 145 155 4.0E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 Pfam PF00667 FAD binding domain 237 431 7.6E-28 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 Gene3D G3DSA:2.40.30.10 235 287 2.1E-40 T 22-04-2016 YPO3372 f7ddec63a172487baf98d2f9f14e5aaa 606 Gene3D G3DSA:2.40.30.10 391 461 2.1E-40 T 22-04-2016 YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 4.7E-150 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 SUPERFAMILY SSF53686 4 289 3.8E-92 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 4.5E-123 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 6.1E-67 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 PANTHER PTHR10314 3 292 2.7E-174 T 22-04-2016 YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 Gene3D G3DSA:3.40.50.1100 2 39 3.8E-81 T 22-04-2016 YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 Gene3D G3DSA:3.40.50.1100 146 292 3.8E-81 T 22-04-2016 YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 Gene3D G3DSA:3.40.50.1100 40 139 4.1E-37 T 22-04-2016 YPO3011 c3a051e65a0d1fbc2af5afe7d594b5d6 292 PANTHER PTHR10314:SF100 3 292 2.7E-174 T 22-04-2016 YPO2528 acc5fe71d7099ab407ba11187f8e7c22 455 Pfam PF00425 chorismate binding enzyme 189 438 4.0E-65 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPO2528 acc5fe71d7099ab407ba11187f8e7c22 455 PANTHER PTHR11236 39 451 2.1E-153 T 22-04-2016 YPO2528 acc5fe71d7099ab407ba11187f8e7c22 455 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 120 444 1.0E-102 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 YPO2528 acc5fe71d7099ab407ba11187f8e7c22 455 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 448 42.537 T 22-04-2016 YPO2528 acc5fe71d7099ab407ba11187f8e7c22 455 PANTHER PTHR11236:SF3 39 451 2.1E-153 T 22-04-2016 YPO2528 acc5fe71d7099ab407ba11187f8e7c22 455 Gene3D G3DSA:3.60.120.10 38 450 6.5E-84 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO2528 acc5fe71d7099ab407ba11187f8e7c22 455 SUPERFAMILY SSF56322 23 446 1.19E-97 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO1415 a7c1b6562f4a670e133f80821d34483d 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 5.5E-159 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO1415 a7c1b6562f4a670e133f80821d34483d 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.453 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO1415 a7c1b6562f4a670e133f80821d34483d 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 YPO1415 a7c1b6562f4a670e133f80821d34483d 336 Gene3D G3DSA:3.20.20.70 1 335 2.4E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1415 a7c1b6562f4a670e133f80821d34483d 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 YPO1415 a7c1b6562f4a670e133f80821d34483d 336 PIRSF PIRSF000164 13 336 4.0E-96 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 YPO1415 a7c1b6562f4a670e133f80821d34483d 336 PANTHER PTHR11938 6 332 1.4E-109 T 22-04-2016 YPO1415 a7c1b6562f4a670e133f80821d34483d 336 SUPERFAMILY SSF51395 1 334 3.19E-106 T 22-04-2016 YPO1415 a7c1b6562f4a670e133f80821d34483d 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 4.6E-92 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 YPO0081 5ec3dca28eee6311c9d0a5abac553886 475 PIRSF PIRSF002457 1 474 2.5E-131 T 22-04-2016 IPR030676 Citrate carrier CitT-related YPO0081 5ec3dca28eee6311c9d0a5abac553886 475 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 468 1.5E-131 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO0081 5ec3dca28eee6311c9d0a5abac553886 475 PANTHER PTHR10283:SF89 1 472 4.7E-295 T 22-04-2016 YPO0081 5ec3dca28eee6311c9d0a5abac553886 475 PANTHER PTHR10283 1 472 4.7E-295 T 22-04-2016 YPO0081 5ec3dca28eee6311c9d0a5abac553886 475 Pfam PF00939 Sodium:sulfate symporter transmembrane region 3 473 1.0E-144 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO2763 e2ddbfcf290a9196948591649f8edc74 375 SUPERFAMILY SSF52283 5 129 2.34E-16 T 22-04-2016 YPO2763 e2ddbfcf290a9196948591649f8edc74 375 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO2763 e2ddbfcf290a9196948591649f8edc74 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 278 2.5E-15 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPO2763 e2ddbfcf290a9196948591649f8edc74 375 Gene3D G3DSA:3.40.50.720 2 113 3.6E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2763 e2ddbfcf290a9196948591649f8edc74 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 46.78 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 YPO2763 e2ddbfcf290a9196948591649f8edc74 375 PANTHER PTHR10996:SF111 1 330 4.0E-193 T 22-04-2016 YPO2763 e2ddbfcf290a9196948591649f8edc74 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 256 1.7E-31 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPO2763 e2ddbfcf290a9196948591649f8edc74 375 Gene3D G3DSA:3.40.50.720 114 259 3.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2763 e2ddbfcf290a9196948591649f8edc74 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO2763 e2ddbfcf290a9196948591649f8edc74 375 PANTHER PTHR10996 1 330 4.0E-193 T 22-04-2016 YPO2763 e2ddbfcf290a9196948591649f8edc74 375 SUPERFAMILY SSF51735 91 257 3.78E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2763 e2ddbfcf290a9196948591649f8edc74 375 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 3.4E-29 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 YPO0150 b15ee7723875f1349a2dbe0097b18679 374 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 1 372 2.2E-115 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PANTHER PTHR30332 3 373 1.8E-113 T 22-04-2016 YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PANTHER PTHR30332:SF8 3 373 1.8E-113 T 22-04-2016 YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR01032 Gene IV protein signature 193 216 6.5E-11 T 22-04-2016 YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR01032 Gene IV protein signature 300 328 6.5E-11 T 22-04-2016 YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR01032 Gene IV protein signature 234 257 6.5E-11 T 22-04-2016 YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR01032 Gene IV protein signature 353 374 6.5E-11 T 22-04-2016 YPO0150 b15ee7723875f1349a2dbe0097b18679 374 Pfam PF03958 Bacterial type II/III secretion system short domain 82 143 3.4E-11 T 22-04-2016 IPR005644 NolW-like YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR00811 Bacterial general secretion pathway protein D signature 144 154 7.5E-16 T 22-04-2016 IPR001775 GspD/PilQ family YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR00811 Bacterial general secretion pathway protein D signature 337 355 7.5E-16 T 22-04-2016 IPR001775 GspD/PilQ family YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR00811 Bacterial general secretion pathway protein D signature 209 233 7.5E-16 T 22-04-2016 IPR001775 GspD/PilQ family YPO0150 b15ee7723875f1349a2dbe0097b18679 374 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 374 7.5E-16 T 22-04-2016 IPR001775 GspD/PilQ family YPO0150 b15ee7723875f1349a2dbe0097b18679 374 Pfam PF00263 Bacterial type II and III secretion system protein 213 372 1.6E-46 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YPO3309 c8d644c7373993f66c8ee56778a62243 446 SUPERFAMILY SSF103473 6 370 5.62E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3309 c8d644c7373993f66c8ee56778a62243 446 Gene3D G3DSA:1.20.1250.20 7 179 1.0E-12 T 22-04-2016 YPO3309 c8d644c7373993f66c8ee56778a62243 446 Gene3D G3DSA:1.20.1250.20 203 370 6.9E-21 T 22-04-2016 YPO3309 c8d644c7373993f66c8ee56778a62243 446 PANTHER PTHR23521 2 418 1.7E-205 T 22-04-2016 YPO3309 c8d644c7373993f66c8ee56778a62243 446 PANTHER PTHR23521:SF2 2 418 1.7E-205 T 22-04-2016 YPO3309 c8d644c7373993f66c8ee56778a62243 446 Pfam PF07690 Major Facilitator Superfamily 12 286 8.3E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO0247 587782824502bb17ff57ef0e14f9a3ab 193 PANTHER PTHR13061 5 191 4.8E-70 T 22-04-2016 YPO0247 587782824502bb17ff57ef0e14f9a3ab 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 2.3E-8 T 22-04-2016 IPR001451 Hexapeptide repeat YPO0247 587782824502bb17ff57ef0e14f9a3ab 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 26 59 9.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat YPO0247 587782824502bb17ff57ef0e14f9a3ab 193 Gene3D G3DSA:2.160.10.10 18 189 8.0E-45 T 22-04-2016 YPO0247 587782824502bb17ff57ef0e14f9a3ab 193 SUPERFAMILY SSF51161 18 188 3.19E-46 T 22-04-2016 IPR011004 Trimeric LpxA-like YPO3248 b79e71f444a58f0454a892e5526c5229 596 PANTHER PTHR34597 1 596 1.2E-260 T 22-04-2016 YPO3248 b79e71f444a58f0454a892e5526c5229 596 PANTHER PTHR34597:SF1 1 596 1.2E-260 T 22-04-2016 YPO3248 b79e71f444a58f0454a892e5526c5229 596 Gene3D G3DSA:3.10.20.310 81 166 3.6E-13 T 22-04-2016 YPO3248 b79e71f444a58f0454a892e5526c5229 596 Gene3D G3DSA:2.40.160.50 213 592 1.1E-40 T 22-04-2016 YPO3248 b79e71f444a58f0454a892e5526c5229 596 Pfam PF08479 POTRA domain, ShlB-type 86 166 2.9E-13 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPO3346 e76c073ddfe062cdb9b70567640bad59 113 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 4.0E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPO3346 e76c073ddfe062cdb9b70567640bad59 113 SUPERFAMILY SSF46785 2 91 3.54E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3346 e76c073ddfe062cdb9b70567640bad59 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.7E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPO3346 e76c073ddfe062cdb9b70567640bad59 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 1.7E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPO3346 e76c073ddfe062cdb9b70567640bad59 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 1.7E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPO3346 e76c073ddfe062cdb9b70567640bad59 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 1.7E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPO3346 e76c073ddfe062cdb9b70567640bad59 113 SMART SM00418 8 86 5.7E-27 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YPO3346 e76c073ddfe062cdb9b70567640bad59 113 PANTHER PTHR33154 8 99 3.8E-25 T 22-04-2016 YPO3346 e76c073ddfe062cdb9b70567640bad59 113 Gene3D G3DSA:1.10.10.10 7 89 5.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3495 6f005a089d5e761571dd5b3ecf6063d1 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 123 22.235 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YPO3495 6f005a089d5e761571dd5b3ecf6063d1 136 SUPERFAMILY SSF89919 2 110 2.62E-31 T 22-04-2016 IPR023799 Ribosome-binding factor A domain YPO3495 6f005a089d5e761571dd5b3ecf6063d1 136 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 YPO3495 6f005a089d5e761571dd5b3ecf6063d1 136 Pfam PF02033 Ribosome-binding factor A 7 115 5.9E-30 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YPO3495 6f005a089d5e761571dd5b3ecf6063d1 136 PANTHER PTHR33515 1 136 7.1E-52 T 22-04-2016 YPO3495 6f005a089d5e761571dd5b3ecf6063d1 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 1.6E-40 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YPO3495 6f005a089d5e761571dd5b3ecf6063d1 136 Gene3D G3DSA:3.30.300.20 4 123 6.6E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPO3495 6f005a089d5e761571dd5b3ecf6063d1 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 6.0E-50 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.407 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:3.90.580.10 1 101 3.0E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YPO0644 7864b395b2d16ed221ecee88809660f4 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 1.1E-150 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:1.20.50.20 368 426 1.7E-27 T 22-04-2016 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:1.10.860.10 439 580 3.2E-54 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPO0644 7864b395b2d16ed221ecee88809660f4 582 SMART SM00766 450 575 2.4E-55 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:3.40.1360.10 241 367 1.9E-47 T 22-04-2016 YPO0644 7864b395b2d16ed221ecee88809660f4 582 PANTHER PTHR30313 3 580 3.1E-186 T 22-04-2016 YPO0644 7864b395b2d16ed221ecee88809660f4 582 SUPERFAMILY SSF56731 115 427 1.48E-114 T 22-04-2016 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 2.4E-35 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 1.2E-12 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 YPO0644 7864b395b2d16ed221ecee88809660f4 582 SUPERFAMILY SSF57783 4 100 5.27E-35 T 22-04-2016 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 4.6E-44 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal YPO0644 7864b395b2d16ed221ecee88809660f4 582 SUPERFAMILY SSF117023 447 578 2.48E-46 T 22-04-2016 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Pfam PF01807 CHC2 zinc finger 7 100 3.2E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YPO0644 7864b395b2d16ed221ecee88809660f4 582 Gene3D G3DSA:3.90.980.10 115 240 1.5E-48 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal YPO0644 7864b395b2d16ed221ecee88809660f4 582 Pfam PF13155 Toprim-like 263 348 5.1E-15 T 22-04-2016 YPO0644 7864b395b2d16ed221ecee88809660f4 582 SMART SM00493 259 330 1.8E-22 T 22-04-2016 IPR006171 Toprim domain YPO0644 7864b395b2d16ed221ecee88809660f4 582 SMART SM00400 36 90 1.4E-36 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YPO0552 60e68760b7314a5bae42de853d152172 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.4E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO0552 60e68760b7314a5bae42de853d152172 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.2E-36 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO0552 60e68760b7314a5bae42de853d152172 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.5E-159 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO0552 60e68760b7314a5bae42de853d152172 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 26.007 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO0552 60e68760b7314a5bae42de853d152172 360 PANTHER PTHR22926:SF5 2 360 1.4E-196 T 22-04-2016 YPO0552 60e68760b7314a5bae42de853d152172 360 PANTHER PTHR22926 2 360 1.4E-196 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO0552 60e68760b7314a5bae42de853d152172 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO0552 60e68760b7314a5bae42de853d152172 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO3672 85e4c91e9c79fd07ac744a9d439caaa1 481 SUPERFAMILY SSF111283 22 480 6.28E-131 T 22-04-2016 YPO3672 85e4c91e9c79fd07ac744a9d439caaa1 481 PANTHER PTHR30624 9 481 2.8E-261 T 22-04-2016 YPO3672 85e4c91e9c79fd07ac744a9d439caaa1 481 PANTHER PTHR30624:SF4 9 481 2.8E-261 T 22-04-2016 YPO3672 85e4c91e9c79fd07ac744a9d439caaa1 481 PIRSF PIRSF004919 14 481 1.5E-145 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO3672 85e4c91e9c79fd07ac744a9d439caaa1 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 5.6E-63 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 1.6E-88 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 Pfam PF02355 Protein export membrane protein 117 300 1.9E-71 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 Pfam PF07549 SecD/SecF GG Motif 40 66 1.2E-10 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 PANTHER PTHR30081 7 317 6.9E-95 T 22-04-2016 YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.361 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 Gene3D G3DSA:1.20.1640.10 137 304 1.0E-28 T 22-04-2016 YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 127 288 7.8E-56 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3188 c14ccfdadd559357e7069621b8ba1e58 322 SUPERFAMILY SSF82866 79 302 3.53E-42 T 22-04-2016 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF56425 227 358 1.79E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:1.20.58.100 427 537 1.2E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:3.50.50.60 3 233 1.2E-104 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:3.50.50.60 353 415 1.2E-104 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.1E-5 T 22-04-2016 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-5 T 22-04-2016 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 PANTHER PTHR11632 1 584 0.0 T 22-04-2016 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 Pfam PF00890 FAD binding domain 7 397 2.9E-114 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 PANTHER PTHR11632:SF50 1 584 0.0 T 22-04-2016 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 PIRSF PIRSF000171 1 579 1.6E-41 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF51905 361 416 1.89E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF51905 3 250 1.89E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:4.10.80.40 543 577 5.3E-17 T 22-04-2016 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.5E-9 T 22-04-2016 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-9 T 22-04-2016 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 7.5E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 22-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 SUPERFAMILY SSF46977 444 583 7.46E-45 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 Gene3D G3DSA:3.90.700.10 234 352 6.5E-37 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 3.5E-243 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPO0360 05efe9b64a4d520c4a5000b218d96d7d 607 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 SUPERFAMILY SSF158832 3 321 1.96E-118 T 22-04-2016 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Gene3D G3DSA:1.10.10.650 2 109 6.6E-44 T 22-04-2016 IPR023319 Tex-like protein, HTH domain YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 SMART SM00732 326 423 1.5E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Pfam PF12836 Helix-hairpin-helix motif 490 554 1.1E-28 T 22-04-2016 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 SUPERFAMILY SSF47781 559 631 3.33E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Gene3D G3DSA:2.40.50.140 632 719 9.7E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 PANTHER PTHR10724 1 747 0.0 T 22-04-2016 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 SUPERFAMILY SSF53098 322 468 3.29E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Gene3D G3DSA:3.30.420.140 327 449 7.6E-49 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 PANTHER PTHR10724:SF1 1 747 0.0 T 22-04-2016 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Pfam PF00575 S1 RNA binding domain 649 719 3.7E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Pfam PF16921 Tex protein YqgF-like domain 327 450 3.5E-49 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 SMART SM00316 648 719 1.2E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Gene3D G3DSA:1.10.150.310 498 629 3.9E-48 T 22-04-2016 IPR023097 Tex RuvX-like domain YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 SUPERFAMILY SSF47781 469 557 9.12E-29 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.5E-68 T 22-04-2016 IPR018974 Tex-like protein, N-terminal YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 SUPERFAMILY SSF50249 637 722 8.95E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Gene3D G3DSA:1.10.3500.10 110 322 3.8E-104 T 22-04-2016 IPR023323 Tex-like domain YPO0134 cbc7a0968c1b76b2da79a675586b3ebe 791 Gene3D G3DSA:1.10.3500.10 450 497 3.8E-104 T 22-04-2016 IPR023323 Tex-like domain YPO3472 a7d903900e5490442dae736fc1638023 437 PANTHER PTHR30061:SF14 1 435 2.9E-150 T 22-04-2016 YPO3472 a7d903900e5490442dae736fc1638023 437 Gene3D G3DSA:3.40.190.10 33 142 1.8E-20 T 22-04-2016 YPO3472 a7d903900e5490442dae736fc1638023 437 PANTHER PTHR30061 1 435 2.9E-150 T 22-04-2016 YPO3472 a7d903900e5490442dae736fc1638023 437 Gene3D G3DSA:3.40.190.10 144 354 2.7E-49 T 22-04-2016 YPO3472 a7d903900e5490442dae736fc1638023 437 SUPERFAMILY SSF53850 32 432 1.65E-79 T 22-04-2016 YPO3472 a7d903900e5490442dae736fc1638023 437 Pfam PF01547 Bacterial extracellular solute-binding protein 45 340 4.7E-36 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YPO2074 66eff51818d9d2eeade39d563a35afce 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 1.3E-17 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YPO2074 66eff51818d9d2eeade39d563a35afce 562 Gene3D G3DSA:3.40.50.980 217 379 1.1E-39 T 22-04-2016 YPO2074 66eff51818d9d2eeade39d563a35afce 562 PANTHER PTHR24096 176 560 5.2E-173 T 22-04-2016 YPO2074 66eff51818d9d2eeade39d563a35afce 562 PANTHER PTHR24096 8 153 5.2E-173 T 22-04-2016 YPO2074 66eff51818d9d2eeade39d563a35afce 562 SUPERFAMILY SSF56801 17 554 1.7E-147 T 22-04-2016 YPO2074 66eff51818d9d2eeade39d563a35afce 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO2074 66eff51818d9d2eeade39d563a35afce 562 Pfam PF00501 AMP-binding enzyme 29 460 3.8E-107 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO2074 66eff51818d9d2eeade39d563a35afce 562 Gene3D G3DSA:2.30.38.10 380 451 8.0E-30 T 22-04-2016 YPO2074 66eff51818d9d2eeade39d563a35afce 562 Gene3D G3DSA:3.40.50.980 24 152 4.2E-39 T 22-04-2016 YPO2074 66eff51818d9d2eeade39d563a35afce 562 Gene3D G3DSA:3.40.50.980 185 216 4.2E-39 T 22-04-2016 YPO2074 66eff51818d9d2eeade39d563a35afce 562 Gene3D G3DSA:3.30.300.30 455 552 6.1E-28 T 22-04-2016 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Gene3D G3DSA:1.10.150.20 435 502 7.8E-28 T 22-04-2016 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Gene3D G3DSA:2.40.50.140 319 391 4.4E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 PANTHER PTHR23389 1 531 3.7E-221 T 22-04-2016 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SUPERFAMILY SSF52113 592 668 2.45E-19 T 22-04-2016 IPR001357 BRCT domain YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Gene3D G3DSA:1.10.150.20 504 582 2.2E-30 T 22-04-2016 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SMART SM00532 3 448 4.0E-286 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 PIRSF PIRSF001604 1 670 2.6E-262 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.3E-10 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 PANTHER PTHR23389:SF9 1 531 3.7E-221 T 22-04-2016 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SUPERFAMILY SSF56091 2 316 4.32E-124 T 22-04-2016 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SMART SM00278 512 531 200.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SMART SM00278 480 499 0.79 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SMART SM00278 544 563 38.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SMART SM00278 446 465 17.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Gene3D G3DSA:3.30.470.30 119 252 1.6E-52 T 22-04-2016 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Hamap MF_01588 DNA ligase [ligA]. 2 668 54.405 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 4.5E-13 T 22-04-2016 IPR001357 BRCT domain YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Gene3D G3DSA:3.40.50.10190 592 669 8.8E-27 T 22-04-2016 IPR001357 BRCT domain YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SUPERFAMILY SSF50249 318 400 1.88E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Pfam PF12826 Helix-hairpin-helix motif 510 573 1.2E-23 T 22-04-2016 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 7.1E-274 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Gene3D G3DSA:1.10.287.610 2 67 2.2E-29 T 22-04-2016 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SMART SM00292 594 669 2.1E-12 T 22-04-2016 IPR001357 BRCT domain YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 SUPERFAMILY SSF47781 404 578 1.37E-61 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 2.5E-138 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 2.1E-36 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YPO2989 d85fa24102deef57e854ed4a669e8b2a 670 Pfam PF14520 Helix-hairpin-helix domain 446 502 4.2E-6 T 22-04-2016 YPO4090 418d8c7905719b2ffb69822d5da2dd82 317 PIRSF PIRSF001439 1 310 2.7E-55 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPO4090 418d8c7905719b2ffb69822d5da2dd82 317 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 15 309 3.0E-62 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPO4090 418d8c7905719b2ffb69822d5da2dd82 317 Gene3D G3DSA:3.30.1780.10 1 139 2.7E-34 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal YPO4090 418d8c7905719b2ffb69822d5da2dd82 317 PANTHER PTHR13812:SF19 1 310 3.6E-78 T 22-04-2016 YPO4090 418d8c7905719b2ffb69822d5da2dd82 317 PANTHER PTHR13812 1 310 3.6E-78 T 22-04-2016 YPO4090 418d8c7905719b2ffb69822d5da2dd82 317 Gene3D G3DSA:3.40.50.720 140 297 3.6E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO4090 418d8c7905719b2ffb69822d5da2dd82 317 SUPERFAMILY SSF51735 1 307 9.85E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1846 16e880f4004379e01e4965b42f418091 266 SMART SM00062 42 263 2.7E-86 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO1846 16e880f4004379e01e4965b42f418091 266 SUPERFAMILY SSF53850 15 264 6.73E-78 T 22-04-2016 YPO1846 16e880f4004379e01e4965b42f418091 266 PANTHER PTHR18966:SF189 1 264 1.4E-181 T 22-04-2016 YPO1846 16e880f4004379e01e4965b42f418091 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 2.5E-73 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO1846 16e880f4004379e01e4965b42f418091 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPO1846 16e880f4004379e01e4965b42f418091 266 PANTHER PTHR18966 1 264 1.4E-181 T 22-04-2016 YPO1846 16e880f4004379e01e4965b42f418091 266 SMART SM00079 42 262 6.2E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YPO1846 16e880f4004379e01e4965b42f418091 266 Gene3D G3DSA:3.40.190.10 223 265 3.6E-49 T 22-04-2016 YPO1846 16e880f4004379e01e4965b42f418091 266 Gene3D G3DSA:3.40.190.10 38 119 3.6E-49 T 22-04-2016 YPO1846 16e880f4004379e01e4965b42f418091 266 Gene3D G3DSA:3.40.190.10 120 222 4.6E-31 T 22-04-2016 YPO0834 b5e75c73ffe2f03c2f38a9536e5d84ba 165 PANTHER PTHR33799 1 165 4.7E-110 T 22-04-2016 YPO0834 b5e75c73ffe2f03c2f38a9536e5d84ba 165 SUPERFAMILY SSF52728 5 162 8.63E-47 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPO0834 b5e75c73ffe2f03c2f38a9536e5d84ba 165 Pfam PF03830 PTS system sorbose subfamily IIB component 6 154 1.7E-47 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPO0834 b5e75c73ffe2f03c2f38a9536e5d84ba 165 Gene3D G3DSA:3.40.35.10 5 162 4.8E-53 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPO0834 b5e75c73ffe2f03c2f38a9536e5d84ba 165 PANTHER PTHR33799:SF6 1 165 4.7E-110 T 22-04-2016 YPO0834 b5e75c73ffe2f03c2f38a9536e5d84ba 165 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 153 4.7E-51 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 SUPERFAMILY SSF46689 225 272 1.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 1.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 1.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 Pfam PF12833 Helix-turn-helix domain 193 271 1.0E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 56.825 T 22-04-2016 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 Gene3D G3DSA:1.10.10.60 167 223 1.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 Pfam PF02311 AraC-like ligand binding domain 18 154 2.4E-25 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 PANTHER PTHR11019 1 273 1.0E-184 T 22-04-2016 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 SUPERFAMILY SSF46689 171 221 6.0E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 Gene3D G3DSA:1.10.10.60 225 272 1.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 PANTHER PTHR11019:SF86 1 273 1.0E-184 T 22-04-2016 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 SUPERFAMILY SSF51215 17 157 7.06E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 Gene3D G3DSA:2.60.120.10 1 78 2.5E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO0332 81f9da2df64a62517336de13bcdc4f8f 273 SMART SM00342 187 270 4.4E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0421 724d00d48da985fb7193a516482be16b 1028 SUPERFAMILY SSF82693 559 632 8.89E-6 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 PANTHER PTHR32063 1 1024 0.0 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 Gene3D G3DSA:3.30.70.1430 561 636 6.8E-5 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 Pfam PF00873 AcrB/AcrD/AcrF family 6 1011 1.5E-161 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO0421 724d00d48da985fb7193a516482be16b 1028 SUPERFAMILY SSF82714 184 268 3.66E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO0421 724d00d48da985fb7193a516482be16b 1028 Gene3D G3DSA:3.30.70.1430 40 139 2.8E-23 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 SUPERFAMILY SSF82714 722 792 1.14E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO0421 724d00d48da985fb7193a516482be16b 1028 SUPERFAMILY SSF82693 40 135 8.63E-19 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 Gene3D G3DSA:3.30.2090.10 184 268 2.4E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO0421 724d00d48da985fb7193a516482be16b 1028 Gene3D G3DSA:3.30.2090.10 723 792 6.6E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO0421 724d00d48da985fb7193a516482be16b 1028 SUPERFAMILY SSF82866 293 489 1.83E-36 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 Gene3D G3DSA:1.10.3850.10 803 1013 1.1E-55 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 SUPERFAMILY SSF82693 136 182 9.77E-23 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 SUPERFAMILY SSF82693 270 326 9.77E-23 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 PANTHER PTHR32063:SF18 1 1024 0.0 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 Gene3D G3DSA:1.20.1640.10 290 500 5.9E-45 T 22-04-2016 YPO0421 724d00d48da985fb7193a516482be16b 1028 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO0421 724d00d48da985fb7193a516482be16b 1028 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO0421 724d00d48da985fb7193a516482be16b 1028 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO0421 724d00d48da985fb7193a516482be16b 1028 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO0421 724d00d48da985fb7193a516482be16b 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.9E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO0421 724d00d48da985fb7193a516482be16b 1028 SUPERFAMILY SSF82866 795 1014 1.29E-45 T 22-04-2016 YPO3809 5066b556b08449dda932d59c4dc7f8e6 130 SUPERFAMILY SSF55729 16 125 1.47E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3809 5066b556b08449dda932d59c4dc7f8e6 130 Pfam PF12568 Acetyltransferase (GNAT) domain 2 129 5.0E-55 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3809 5066b556b08449dda932d59c4dc7f8e6 130 Gene3D G3DSA:3.40.630.30 20 125 1.9E-10 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3809 5066b556b08449dda932d59c4dc7f8e6 130 Hamap MF_02018 PanD maturation factor [panM]. 1 130 34.596 T 22-04-2016 IPR032900 PanD maturation factor PanM GO:0015940|GO:0031638 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 Gene3D G3DSA:1.20.200.10 139 416 1.6E-104 T 22-04-2016 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 Pfam PF00206 Lyase 12 342 2.0E-117 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 Pfam PF10415 Fumarase C C-terminus 408 461 1.3E-25 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 2.7E-33 T 22-04-2016 IPR000362 Fumarate lyase family YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.7E-33 T 22-04-2016 IPR000362 Fumarate lyase family YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.7E-33 T 22-04-2016 IPR000362 Fumarate lyase family YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.7E-33 T 22-04-2016 IPR000362 Fumarate lyase family YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 Gene3D G3DSA:1.10.40.30 417 462 3.4E-33 T 22-04-2016 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 2.9E-243 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.499 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.1E-5 T 22-04-2016 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.1E-5 T 22-04-2016 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 Gene3D G3DSA:1.10.275.10 3 138 7.5E-60 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 SUPERFAMILY SSF48557 4 462 1.73E-157 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 PANTHER PTHR11444 1 461 1.8E-250 T 22-04-2016 IPR000362 Fumarate lyase family YPO2263a 8c8547c6ca07605ef944b495538eaba5 465 PANTHER PTHR11444:SF1 1 461 1.8E-250 T 22-04-2016 YPO1534 691d841afbb1789d5bd2ac025eef3878 346 PANTHER PTHR30472 15 346 7.1E-158 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO1534 691d841afbb1789d5bd2ac025eef3878 346 PANTHER PTHR30472:SF24 15 346 7.1E-158 T 22-04-2016 YPO1534 691d841afbb1789d5bd2ac025eef3878 346 Gene3D G3DSA:1.10.3470.10 22 344 2.8E-75 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO1534 691d841afbb1789d5bd2ac025eef3878 346 SUPERFAMILY SSF81345 20 339 4.32E-58 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO1534 691d841afbb1789d5bd2ac025eef3878 346 Pfam PF01032 FecCD transport family 35 339 9.7E-75 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO1818 8bd16688f269f5995e0c032d02223927 60 PANTHER PTHR34873 1 60 3.0E-19 T 22-04-2016 YPO1818 8bd16688f269f5995e0c032d02223927 60 Gene3D G3DSA:3.30.920.30 1 60 7.8E-27 T 22-04-2016 YPO1818 8bd16688f269f5995e0c032d02223927 60 PANTHER PTHR34873:SF3 1 60 3.0E-19 T 22-04-2016 YPO1818 8bd16688f269f5995e0c032d02223927 60 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 59 9.1E-23 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 YPO1818 8bd16688f269f5995e0c032d02223927 60 SUPERFAMILY SSF54786 1 60 5.49E-20 T 22-04-2016 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 Gene3D G3DSA:1.10.520.20 3 103 6.2E-34 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 2.1E-50 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 PANTHER PTHR11910 8 176 2.3E-58 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.934 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.5E-63 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YPO4124 a4a4c50db4c1f86c245e8cc3e015f003 177 SUPERFAMILY SSF47928 3 104 1.44E-27 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Gene3D G3DSA:3.30.70.380 703 794 4.7E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Gene3D G3DSA:3.30.56.20 402 475 2.3E-28 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 SUPERFAMILY SSF55681 467 690 8.95E-56 T 22-04-2016 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 SMART SM00874 403 471 1.5E-31 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Gene3D G3DSA:3.50.40.10 198 392 2.1E-85 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 SUPERFAMILY SSF56037 196 394 2.25E-77 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Pfam PF01588 Putative tRNA binding domain 45 145 2.1E-27 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 SUPERFAMILY SSF54991 696 794 1.96E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 2.8E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.271 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Pfam PF03483 B3/4 domain 212 385 4.1E-71 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 SMART SM00873 212 385 9.7E-99 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 SMART SM00896 701 794 8.0E-45 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Gene3D G3DSA:3.30.56.10 155 183 1.5E-27 T 22-04-2016 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Gene3D G3DSA:3.30.56.10 1 38 1.5E-27 T 22-04-2016 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 SUPERFAMILY SSF46955 404 475 1.56E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.7E-292 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 SUPERFAMILY SSF50249 36 195 4.65E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Gene3D G3DSA:2.40.50.140 42 154 1.3E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Gene3D G3DSA:3.30.930.10 495 690 3.1E-68 T 22-04-2016 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 PANTHER PTHR10947:SF0 2 794 0.0 T 22-04-2016 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 PANTHER PTHR10947 2 794 0.0 T 22-04-2016 YPO2428 6662a0ee089a2eb67ade476f06e3039c 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 1.5E-20 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 YPO2202 7bd7da05052cb8fde01c837fcdaa7e3e 104 PANTHER PTHR34606 1 104 1.1E-67 T 22-04-2016 YPO2202 7bd7da05052cb8fde01c837fcdaa7e3e 104 SMART SM00749 42 104 6.4E-8 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPO2202 7bd7da05052cb8fde01c837fcdaa7e3e 104 PANTHER PTHR34606:SF1 1 104 1.1E-67 T 22-04-2016 YPO2202 7bd7da05052cb8fde01c837fcdaa7e3e 104 Pfam PF04972 BON domain 37 103 4.0E-21 T 22-04-2016 IPR007055 BON domain YPO3992 158eed2ee23d93b712877abed5f90805 429 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 1.9E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 9.5E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 Gene3D G3DSA:1.10.3860.10 5 406 6.2E-119 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 PANTHER PTHR11958 5 424 3.5E-266 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.62 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 YPO3992 158eed2ee23d93b712877abed5f90805 429 PANTHER PTHR11958:SF49 5 424 3.5E-266 T 22-04-2016 YPO3992 158eed2ee23d93b712877abed5f90805 429 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YPO3992 158eed2ee23d93b712877abed5f90805 429 SUPERFAMILY SSF118215 9 401 1.05E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO2003 b9a5f5ae58738a6ac8059dcee5cedffa 235 Pfam PF12682 Flavodoxin 85 219 2.8E-24 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPO2003 b9a5f5ae58738a6ac8059dcee5cedffa 235 Gene3D G3DSA:3.40.50.360 51 231 9.4E-25 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO2003 b9a5f5ae58738a6ac8059dcee5cedffa 235 SUPERFAMILY SSF52218 50 231 3.48E-20 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO2003 b9a5f5ae58738a6ac8059dcee5cedffa 235 PANTHER PTHR39201 51 235 2.0E-77 T 22-04-2016 YPO2003 b9a5f5ae58738a6ac8059dcee5cedffa 235 PANTHER PTHR39201:SF1 51 235 2.0E-77 T 22-04-2016 YPO2238 04b3770ded4ae84ac9ebe069e090e067 333 Gene3D G3DSA:3.40.50.720 3 190 1.4E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2238 04b3770ded4ae84ac9ebe069e090e067 333 PANTHER PTHR10366:SF440 3 319 2.6E-94 T 22-04-2016 YPO2238 04b3770ded4ae84ac9ebe069e090e067 333 PANTHER PTHR10366 3 319 2.6E-94 T 22-04-2016 YPO2238 04b3770ded4ae84ac9ebe069e090e067 333 Gene3D G3DSA:3.90.25.10 191 303 3.2E-40 T 22-04-2016 YPO2238 04b3770ded4ae84ac9ebe069e090e067 333 SUPERFAMILY SSF51735 2 319 8.37E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2238 04b3770ded4ae84ac9ebe069e090e067 333 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 207 4.1E-19 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 Gene3D G3DSA:1.10.10.10 5 83 5.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 Gene3D G3DSA:3.40.190.10 180 265 4.4E-5 T 22-04-2016 YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 SUPERFAMILY SSF53850 92 294 2.17E-39 T 22-04-2016 YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 SUPERFAMILY SSF46785 5 89 1.57E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 PANTHER PTHR30537 1 294 1.4E-190 T 22-04-2016 YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 Gene3D G3DSA:3.40.190.10 94 179 4.2E-18 T 22-04-2016 YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.0E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 Pfam PF03466 LysR substrate binding domain 91 294 2.4E-37 T 22-04-2016 IPR005119 LysR, substrate-binding YPO2807 5bbb97cd3ece4421e16b2bf68a66603b 297 PANTHER PTHR30537:SF1 1 294 1.4E-190 T 22-04-2016 YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 SUPERFAMILY SSF52283 7 135 8.72E-49 T 22-04-2016 YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 7.7E-37 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 SUPERFAMILY SSF55021 338 412 1.59E-19 T 22-04-2016 YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 SUPERFAMILY SSF51735 108 295 2.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 Gene3D G3DSA:3.30.70.260 324 412 4.4E-29 T 22-04-2016 YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 PANTHER PTHR10996 1 370 3.1E-247 T 22-04-2016 YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 Pfam PF01842 ACT domain 347 404 9.2E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 Gene3D G3DSA:3.40.50.720 120 297 4.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 4.1E-52 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 Gene3D G3DSA:3.40.50.720 8 119 5.7E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0914 34c8a8a4851f96b74f168e25e85a000d 413 PANTHER PTHR10996:SF18 1 370 3.1E-247 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 YPO0833 9108b665470d61bcf3787bcb887928e2 388 Gene3D G3DSA:3.40.50.10490 4 200 6.6E-69 T 22-04-2016 YPO0833 9108b665470d61bcf3787bcb887928e2 388 PANTHER PTHR32502:SF3 1 185 1.5E-217 T 22-04-2016 YPO0833 9108b665470d61bcf3787bcb887928e2 388 PANTHER PTHR32502:SF3 235 388 1.5E-217 T 22-04-2016 YPO0833 9108b665470d61bcf3787bcb887928e2 388 Gene3D G3DSA:3.40.50.10490 205 380 1.5E-50 T 22-04-2016 YPO0833 9108b665470d61bcf3787bcb887928e2 388 Pfam PF01380 SIS domain 229 358 3.8E-13 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO0833 9108b665470d61bcf3787bcb887928e2 388 Pfam PF01380 SIS domain 54 192 5.6E-14 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO0833 9108b665470d61bcf3787bcb887928e2 388 PANTHER PTHR32502 1 185 1.5E-217 T 22-04-2016 YPO0833 9108b665470d61bcf3787bcb887928e2 388 PANTHER PTHR32502 235 388 1.5E-217 T 22-04-2016 YPO0833 9108b665470d61bcf3787bcb887928e2 388 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 386 9.2E-164 T 22-04-2016 IPR014180 Sugar isomerase, AgaS GO:0016861 KEGG: 00040+5.3.1.-|KEGG: 00052+5.3.1.- YPO0833 9108b665470d61bcf3787bcb887928e2 388 SUPERFAMILY SSF53697 19 377 7.7E-56 T 22-04-2016 YPO4103 cbd032c443134035f8ec8323b6933435 454 Pfam PF01926 50S ribosome-binding GTPase 218 310 2.9E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO4103 cbd032c443134035f8ec8323b6933435 454 SUPERFAMILY SSF52540 197 372 2.52E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4103 cbd032c443134035f8ec8323b6933435 454 SUPERFAMILY SSF52540 72 163 2.52E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4103 cbd032c443134035f8ec8323b6933435 454 Pfam PF12631 MnmE helical domain 123 451 1.1E-58 T 22-04-2016 IPR025867 MnmE, helical domain YPO4103 cbd032c443134035f8ec8323b6933435 454 Gene3D G3DSA:3.40.50.300 286 376 8.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4103 cbd032c443134035f8ec8323b6933435 454 PANTHER PTHR11649:SF56 8 454 3.0E-176 T 22-04-2016 YPO4103 cbd032c443134035f8ec8323b6933435 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 1.3E-99 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 YPO4103 cbd032c443134035f8ec8323b6933435 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 32.932 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 YPO4103 cbd032c443134035f8ec8323b6933435 454 Gene3D G3DSA:3.40.50.300 211 247 6.0E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4103 cbd032c443134035f8ec8323b6933435 454 Gene3D G3DSA:3.30.1360.120 1 121 1.0E-41 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YPO4103 cbd032c443134035f8ec8323b6933435 454 SUPERFAMILY SSF116878 379 454 3.66E-50 T 22-04-2016 YPO4103 cbd032c443134035f8ec8323b6933435 454 SUPERFAMILY SSF116878 121 220 3.66E-50 T 22-04-2016 YPO4103 cbd032c443134035f8ec8323b6933435 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 6.1E-34 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal YPO4103 cbd032c443134035f8ec8323b6933435 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 7.8E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO4103 cbd032c443134035f8ec8323b6933435 454 PANTHER PTHR11649 8 454 3.0E-176 T 22-04-2016 YPO4103 cbd032c443134035f8ec8323b6933435 454 Gene3D G3DSA:1.20.120.430 248 271 7.1E-58 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 YPO4103 cbd032c443134035f8ec8323b6933435 454 Gene3D G3DSA:1.20.120.430 122 182 7.1E-58 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 YPO4103 cbd032c443134035f8ec8323b6933435 454 Gene3D G3DSA:1.20.120.430 384 454 7.1E-58 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 YPO1066 f43dfcf6a7f0ac089151baed746c1163 138 Gene3D G3DSA:3.30.160.200 5 107 2.0E-31 T 22-04-2016 YPO1066 f43dfcf6a7f0ac089151baed746c1163 138 Pfam PF00472 RF-1 domain 6 131 2.2E-23 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPO1066 f43dfcf6a7f0ac089151baed746c1163 138 PANTHER PTHR11075 14 135 7.0E-40 T 22-04-2016 YPO1066 f43dfcf6a7f0ac089151baed746c1163 138 SUPERFAMILY SSF75620 8 115 1.88E-13 T 22-04-2016 YPO1066 f43dfcf6a7f0ac089151baed746c1163 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPO1290 826d16940647da6584cc49542a85982c 498 SUPERFAMILY SSF53720 15 490 5.63E-157 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPO1290 826d16940647da6584cc49542a85982c 498 Gene3D G3DSA:3.40.605.10 21 275 6.5E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPO1290 826d16940647da6584cc49542a85982c 498 PANTHER PTHR11699:SF49 1 498 2.6E-221 T 22-04-2016 YPO1290 826d16940647da6584cc49542a85982c 498 Gene3D G3DSA:3.40.309.10 276 465 1.3E-58 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO1290 826d16940647da6584cc49542a85982c 498 PANTHER PTHR11699 1 498 2.6E-221 T 22-04-2016 YPO1290 826d16940647da6584cc49542a85982c 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPO1290 826d16940647da6584cc49542a85982c 498 Pfam PF00171 Aldehyde dehydrogenase family 30 490 7.9E-160 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPO0625 1970bea133a42aeb846621b5f0b7848c 148 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 118 1.7E-13 T 22-04-2016 IPR019587 Polyketide cyclase/dehydrase YPO0625 1970bea133a42aeb846621b5f0b7848c 148 PANTHER PTHR39332 1 148 2.4E-14 T 22-04-2016 YPO0625 1970bea133a42aeb846621b5f0b7848c 148 Gene3D G3DSA:3.30.530.20 7 146 1.2E-28 T 22-04-2016 IPR023393 START-like domain YPO0625 1970bea133a42aeb846621b5f0b7848c 148 SUPERFAMILY SSF55961 5 144 3.96E-24 T 22-04-2016 YPO0625 1970bea133a42aeb846621b5f0b7848c 148 PANTHER PTHR39332:SF2 1 148 2.4E-14 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912 208 317 2.7E-24 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912 5 154 2.7E-24 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912 171 192 2.7E-24 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 Gene3D G3DSA:3.50.50.60 5 119 4.1E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912:SF140 171 192 2.7E-24 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912:SF140 208 317 2.7E-24 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PANTHER PTHR22912:SF140 5 154 2.7E-24 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 4.6E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.5E-7 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.5E-7 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.5E-7 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 Gene3D G3DSA:3.50.50.60 120 346 2.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.2E-14 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.2E-14 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.2E-14 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.2E-14 T 22-04-2016 YPO1617 067ae70798ac7b9c4cc7b6a9af5ad8c5 434 SUPERFAMILY SSF51905 4 338 1.97E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2618 b386f7fedaedb96c52343a36b615c19d 157 PANTHER PTHR22881 2 154 7.4E-68 T 22-04-2016 YPO2618 b386f7fedaedb96c52343a36b615c19d 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site YPO2618 b386f7fedaedb96c52343a36b615c19d 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 4.1E-35 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YPO2618 b386f7fedaedb96c52343a36b615c19d 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 23.648 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YPO2618 b386f7fedaedb96c52343a36b615c19d 157 SUPERFAMILY SSF55486 4 151 3.17E-48 T 22-04-2016 YPO2618 b386f7fedaedb96c52343a36b615c19d 157 Pfam PF02130 Uncharacterized protein family UPF0054 21 143 2.8E-37 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YPO2618 b386f7fedaedb96c52343a36b615c19d 157 Gene3D G3DSA:3.40.390.30 12 153 3.8E-48 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:1.10.287.130 660 728 4.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:3.30.565.10 734 888 2.8E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 SUPERFAMILY SSF47384 660 733 2.55E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 SMART SM00387 776 886 6.1E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 PANTHER PTHR24423:SF562 23 198 4.4E-132 T 22-04-2016 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 PANTHER PTHR24423:SF562 599 884 4.4E-132 T 22-04-2016 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 777 886 3.6E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 SUPERFAMILY SSF55781 510 658 5.15E-8 T 22-04-2016 IPR029016 GAF domain-like YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 PANTHER PTHR24423 23 198 4.4E-132 T 22-04-2016 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 PANTHER PTHR24423 599 884 4.4E-132 T 22-04-2016 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 6.2E-99 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 SUPERFAMILY SSF52402 254 361 2.09E-6 T 22-04-2016 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:3.40.50.300 22 230 6.0E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 SMART SM00388 665 732 7.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF13493 Domain of unknown function (DUF4118) 404 508 1.3E-30 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:3.40.50.620 245 360 2.5E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 732 2.2E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 SUPERFAMILY SSF55874 721 888 7.33E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Pfam PF13492 GAF domain 530 646 7.4E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 Gene3D G3DSA:1.20.120.620 398 503 3.7E-40 T 22-04-2016 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 883 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 841 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 827 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2689 886859ec9bbf6c9efba12ddada57ea02 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 864 2.7E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2422 7e77339e8dfe124ab28bc3dc3556627e 384 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 71.371 T 22-04-2016 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87|UniPathway: UPA00030|UniPathway: UPA00032 YPO2422 7e77339e8dfe124ab28bc3dc3556627e 384 Gene3D G3DSA:3.90.1150.10 253 379 2.3E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO2422 7e77339e8dfe124ab28bc3dc3556627e 384 Gene3D G3DSA:3.40.640.10 4 251 5.4E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO2422 7e77339e8dfe124ab28bc3dc3556627e 384 PIRSF PIRSF000390 1 381 2.1E-111 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO2422 7e77339e8dfe124ab28bc3dc3556627e 384 PANTHER PTHR30244 1 380 1.9E-177 T 22-04-2016 YPO2422 7e77339e8dfe124ab28bc3dc3556627e 384 PANTHER PTHR30244:SF3 1 380 1.9E-177 T 22-04-2016 YPO2422 7e77339e8dfe124ab28bc3dc3556627e 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 4.3E-128 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO2422 7e77339e8dfe124ab28bc3dc3556627e 384 SUPERFAMILY SSF53383 4 376 1.8E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 Pfam PF13932 GidA associated domain 403 616 2.2E-70 T 22-04-2016 IPR026904 GidA associated domain 3 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 SUPERFAMILY SSF51905 97 261 6.06E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 SUPERFAMILY SSF51905 6 66 6.06E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 4.7E-294 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 Pfam PF01134 Glucose inhibited division protein A 8 398 1.5E-168 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 SMART SM01228 546 617 2.8E-44 T 22-04-2016 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 Gene3D G3DSA:3.50.50.60 6 235 7.2E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 PANTHER PTHR11806 1 629 0.0 T 22-04-2016 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 PANTHER PTHR11806:SF0 1 629 0.0 T 22-04-2016 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.617 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 YPO4130 a6f4f1782e65c5229c883cd2b0257fde 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site YPO3162 33c1fab5e8c8dec04e7d3c303484f0a3 492 SUPERFAMILY SSF103473 6 407 6.93E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3162 33c1fab5e8c8dec04e7d3c303484f0a3 492 Pfam PF07690 Major Facilitator Superfamily 18 366 2.2E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO3162 33c1fab5e8c8dec04e7d3c303484f0a3 492 Gene3D G3DSA:1.20.1250.20 14 198 9.8E-19 T 22-04-2016 YPO3162 33c1fab5e8c8dec04e7d3c303484f0a3 492 Gene3D G3DSA:1.20.1250.20 223 412 1.0E-13 T 22-04-2016 YPO3162 33c1fab5e8c8dec04e7d3c303484f0a3 492 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 4.0E-117 T 22-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 YPO3162 33c1fab5e8c8dec04e7d3c303484f0a3 492 PANTHER PTHR12778 3 404 1.4E-125 T 22-04-2016 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 SUPERFAMILY SSF46689 57 106 6.27E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 SMART SM00871 126 287 6.7E-20 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 PANTHER PTHR11019 5 112 1.8E-67 T 22-04-2016 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 SUPERFAMILY SSF46689 6 55 6.72E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 Pfam PF12833 Helix-turn-helix domain 27 105 1.5E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 PANTHER PTHR11019:SF84 5 112 1.8E-67 T 22-04-2016 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 Gene3D G3DSA:1.10.10.60 58 119 3.3E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 Gene3D G3DSA:3.20.80.10 124 288 5.1E-58 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 SUPERFAMILY SSF55136 123 287 2.51E-58 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 Pfam PF06445 GyrI-like small molecule binding domain 127 287 7.4E-27 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 SMART SM00342 21 104 3.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0456 dc96b61bcc514b632a7bb84919d03c34 288 Gene3D G3DSA:1.10.10.60 2 57 7.2E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 SMART SM00195 302 433 1.7E-7 T 22-04-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 PANTHER PTHR10159 290 434 1.6E-63 T 22-04-2016 IPR024950 Dual specificity phosphatase YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 PANTHER PTHR10159 62 274 1.6E-63 T 22-04-2016 IPR024950 Dual specificity phosphatase YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 Gene3D G3DSA:3.90.190.10 285 436 1.7E-19 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 SUPERFAMILY SSF52799 285 436 9.62E-23 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 Pfam PF14378 PAP2 superfamily 78 200 1.1E-8 T 22-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 Pfam PF00782 Dual specificity phosphatase, catalytic domain 346 431 2.7E-14 T 22-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 SMART SM00404 337 428 0.0065 T 22-04-2016 IPR003595 Protein-tyrosine phosphatase, catalytic YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 PANTHER PTHR10159:SF370 290 434 1.6E-63 T 22-04-2016 YPO2813 d3f7bcc74a9fc69633d7b5c03da62ecc 439 PANTHER PTHR10159:SF370 62 274 1.6E-63 T 22-04-2016 YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 Gene3D G3DSA:3.40.50.980 337 399 2.6E-31 T 22-04-2016 YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 Gene3D G3DSA:3.40.50.980 193 284 2.6E-31 T 22-04-2016 YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 PANTHER PTHR24096:SF193 10 601 2.0E-227 T 22-04-2016 YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 Pfam PF00501 AMP-binding enzyme 16 470 1.7E-90 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 SUPERFAMILY SSF56801 340 599 1.31E-109 T 22-04-2016 YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 SUPERFAMILY SSF56801 8 289 1.31E-109 T 22-04-2016 YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 Gene3D G3DSA:2.30.38.10 400 461 3.7E-19 T 22-04-2016 YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 PANTHER PTHR24096 10 601 2.0E-227 T 22-04-2016 YPO0537 0fcd07e57077e5d4d9d87ec57f064c24 601 Gene3D G3DSA:3.40.50.980 11 192 9.9E-30 T 22-04-2016 YPO4007 a943638418ca214fca491f71360fe73d 443 PANTHER PTHR11662 6 434 4.5E-243 T 22-04-2016 YPO4007 a943638418ca214fca491f71360fe73d 443 PANTHER PTHR11662:SF286 6 434 4.5E-243 T 22-04-2016 YPO4007 a943638418ca214fca491f71360fe73d 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 7.6E-143 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YPO4007 a943638418ca214fca491f71360fe73d 443 SUPERFAMILY SSF103473 19 434 2.09E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO4007 a943638418ca214fca491f71360fe73d 443 PIRSF PIRSF002808 6 443 1.2E-142 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YPO4007 a943638418ca214fca491f71360fe73d 443 Pfam PF07690 Major Facilitator Superfamily 36 396 2.0E-49 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO4007 a943638418ca214fca491f71360fe73d 443 Gene3D G3DSA:1.20.1250.20 24 211 2.3E-53 T 22-04-2016 YPO4007 a943638418ca214fca491f71360fe73d 443 Gene3D G3DSA:1.20.1250.20 243 434 7.9E-39 T 22-04-2016 YPO0628 31f7a69b39f6c2d1b79baf69d94de198 134 SUPERFAMILY SSF55298 4 133 4.87E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO0628 31f7a69b39f6c2d1b79baf69d94de198 134 PANTHER PTHR11803 1 134 4.0E-70 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO0628 31f7a69b39f6c2d1b79baf69d94de198 134 Pfam PF01042 Endoribonuclease L-PSP 18 132 1.3E-21 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO0628 31f7a69b39f6c2d1b79baf69d94de198 134 Gene3D G3DSA:3.30.1330.40 1 134 1.5E-36 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO0628 31f7a69b39f6c2d1b79baf69d94de198 134 PANTHER PTHR11803:SF9 1 134 4.0E-70 T 22-04-2016 YPO2718 8f65d371717f918390b7e9b551528998 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 2.8E-15 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPO2718 8f65d371717f918390b7e9b551528998 226 SUPERFAMILY SSF54768 109 223 2.2E-27 T 22-04-2016 YPO2718 8f65d371717f918390b7e9b551528998 226 SMART SM00535 21 149 8.4E-55 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPO2718 8f65d371717f918390b7e9b551528998 226 PANTHER PTHR11207 4 225 7.0E-113 T 22-04-2016 YPO2718 8f65d371717f918390b7e9b551528998 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPO2718 8f65d371717f918390b7e9b551528998 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 1.0E-73 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 YPO2718 8f65d371717f918390b7e9b551528998 226 Pfam PF14622 Ribonuclease-III-like 20 142 2.1E-33 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPO2718 8f65d371717f918390b7e9b551528998 226 Gene3D G3DSA:1.10.1520.10 6 148 7.0E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPO2718 8f65d371717f918390b7e9b551528998 226 SUPERFAMILY SSF69065 5 159 4.19E-49 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YPO2718 8f65d371717f918390b7e9b551528998 226 Gene3D G3DSA:3.30.160.20 153 223 9.4E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPO2718 8f65d371717f918390b7e9b551528998 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.607 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 YPO2718 8f65d371717f918390b7e9b551528998 226 SMART SM00358 156 224 1.5E-23 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPO2880 8c6357778146afa3e368177c3a901968 345 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 345 42.681 T 22-04-2016 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 YPO2880 8c6357778146afa3e368177c3a901968 345 PANTHER PTHR34475:SF1 2 342 8.2E-61 T 22-04-2016 YPO2880 8c6357778146afa3e368177c3a901968 345 SMART SM00530 18 79 1.7E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO2880 8c6357778146afa3e368177c3a901968 345 Pfam PF13413 Helix-turn-helix domain 18 79 1.4E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2880 8c6357778146afa3e368177c3a901968 345 SUPERFAMILY SSF47413 12 81 4.29E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2880 8c6357778146afa3e368177c3a901968 345 Pfam PF13464 Domain of unknown function (DUF4115) 268 342 7.1E-24 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 YPO2880 8c6357778146afa3e368177c3a901968 345 PANTHER PTHR34475 2 342 8.2E-61 T 22-04-2016 YPO2880 8c6357778146afa3e368177c3a901968 345 Gene3D G3DSA:1.10.260.40 9 85 1.3E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0590 429c14b5f2cc29444be02b49f7299799 189 PRINTS PR01077 Claudin family signature 47 68 2.4E-5 T 22-04-2016 YPO0590 429c14b5f2cc29444be02b49f7299799 189 PRINTS PR01077 Claudin family signature 16 38 2.4E-5 T 22-04-2016 YPO0590 429c14b5f2cc29444be02b49f7299799 189 Pfam PF03729 Short repeat of unknown function (DUF308) 26 97 4.6E-13 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane YPO0590 429c14b5f2cc29444be02b49f7299799 189 Pfam PF03729 Short repeat of unknown function (DUF308) 84 152 1.9E-11 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane YPO0590 429c14b5f2cc29444be02b49f7299799 189 PANTHER PTHR34989 1 188 7.7E-42 T 22-04-2016 YPO0590 429c14b5f2cc29444be02b49f7299799 189 PANTHER PTHR34989:SF1 1 188 7.7E-42 T 22-04-2016 YPO3403 a0c0b7560e425fda6d6c4531e390169f 126 Gene3D G3DSA:2.40.40.20 1 124 9.6E-54 T 22-04-2016 YPO3403 a0c0b7560e425fda6d6c4531e390169f 126 PANTHER PTHR21012 2 126 1.5E-67 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPO3403 a0c0b7560e425fda6d6c4531e390169f 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 69.137 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPO3403 a0c0b7560e425fda6d6c4531e390169f 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-65 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPO3403 a0c0b7560e425fda6d6c4531e390169f 126 PIRSF PIRSF006246 1 125 1.5E-52 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPO3403 a0c0b7560e425fda6d6c4531e390169f 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 6.8E-59 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPO3403 a0c0b7560e425fda6d6c4531e390169f 126 PANTHER PTHR21012:SF0 2 126 1.5E-67 T 22-04-2016 YPO3403 a0c0b7560e425fda6d6c4531e390169f 126 Pfam PF02261 Aspartate decarboxylase 1 114 3.7E-47 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YPO3403 a0c0b7560e425fda6d6c4531e390169f 126 SUPERFAMILY SSF50692 1 115 5.84E-46 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPO1626 05abb0cc10e1128bf8c62bb71f735f6f 400 PANTHER PTHR30489:SF8 1 400 2.1E-238 T 22-04-2016 YPO1626 05abb0cc10e1128bf8c62bb71f735f6f 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 6.1E-12 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPO1626 05abb0cc10e1128bf8c62bb71f735f6f 400 Pfam PF02687 FtsX-like permease family 271 392 6.2E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPO1626 05abb0cc10e1128bf8c62bb71f735f6f 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 8.6E-139 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 YPO1626 05abb0cc10e1128bf8c62bb71f735f6f 400 PANTHER PTHR30489 1 400 2.1E-238 T 22-04-2016 YPO3974 b6e8b24e532302231de03937f643c6cc 256 Gene3D G3DSA:3.40.50.150 60 249 1.4E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3974 b6e8b24e532302231de03937f643c6cc 256 SUPERFAMILY SSF53335 9 249 1.2E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3974 b6e8b24e532302231de03937f643c6cc 256 Pfam PF04445 Putative SAM-dependent methyltransferase 22 249 1.1E-107 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 YPO3974 b6e8b24e532302231de03937f643c6cc 256 Gene3D G3DSA:3.40.1630.10 5 59 1.5E-26 T 22-04-2016 YPO3974 b6e8b24e532302231de03937f643c6cc 256 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 6 251 38.124 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 YPO3974 b6e8b24e532302231de03937f643c6cc 256 PANTHER PTHR36112:SF1 3 256 7.2E-154 T 22-04-2016 YPO3974 b6e8b24e532302231de03937f643c6cc 256 PANTHER PTHR36112 3 256 7.2E-154 T 22-04-2016 YPO3493 fc8b78415808bf4c0d8dc16b979cc7e6 89 Gene3D G3DSA:1.10.287.10 3 89 1.8E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 YPO3493 fc8b78415808bf4c0d8dc16b979cc7e6 89 SUPERFAMILY SSF47060 3 89 2.71E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 YPO3493 fc8b78415808bf4c0d8dc16b979cc7e6 89 Pfam PF00312 Ribosomal protein S15 8 88 3.0E-37 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3493 fc8b78415808bf4c0d8dc16b979cc7e6 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3493 fc8b78415808bf4c0d8dc16b979cc7e6 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.924 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 YPO3493 fc8b78415808bf4c0d8dc16b979cc7e6 89 PANTHER PTHR23321 1 89 1.1E-47 T 22-04-2016 YPO3493 fc8b78415808bf4c0d8dc16b979cc7e6 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.1E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 YPO3493 fc8b78415808bf4c0d8dc16b979cc7e6 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 9.0E-40 T 22-04-2016 YPO3493 fc8b78415808bf4c0d8dc16b979cc7e6 89 SMART SM01387 8 88 1.2E-50 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3524 c332cb7528967d202c302a4238848fcf 578 Pfam PF01103 Surface antigen 336 575 6.0E-31 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 YPO3524 c332cb7528967d202c302a4238848fcf 578 Pfam PF07244 Surface antigen variable number repeat 190 253 6.8E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YPO3524 c332cb7528967d202c302a4238848fcf 578 PANTHER PTHR12815:SF12 1 578 1.9E-297 T 22-04-2016 YPO3524 c332cb7528967d202c302a4238848fcf 578 Gene3D G3DSA:2.40.160.50 298 575 1.1E-26 T 22-04-2016 YPO3524 c332cb7528967d202c302a4238848fcf 578 PANTHER PTHR12815 1 578 1.9E-297 T 22-04-2016 YPO2230 00059b692391c88b038ef2187826dad2 231 PANTHER PTHR22789:SF7 1 231 3.5E-153 T 22-04-2016 YPO2230 00059b692391c88b038ef2187826dad2 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 4.3E-45 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO2230 00059b692391c88b038ef2187826dad2 231 Gene3D G3DSA:3.40.225.10 2 231 3.1E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO2230 00059b692391c88b038ef2187826dad2 231 PANTHER PTHR22789 1 231 3.5E-153 T 22-04-2016 YPO2230 00059b692391c88b038ef2187826dad2 231 SMART SM01007 7 198 8.8E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO2230 00059b692391c88b038ef2187826dad2 231 SUPERFAMILY SSF53639 1 223 3.34E-67 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO2230 00059b692391c88b038ef2187826dad2 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 1.9E-125 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 YPO1047 884eb179a33cfe769963dc2d44f6206a 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.5E-79 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 YPO1047 884eb179a33cfe769963dc2d44f6206a 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.659 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 YPO1047 884eb179a33cfe769963dc2d44f6206a 185 Pfam PF01765 Ribosome recycling factor 20 183 8.7E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain YPO1047 884eb179a33cfe769963dc2d44f6206a 185 SUPERFAMILY SSF55194 2 184 4.19E-70 T 22-04-2016 IPR023584 Ribosome recycling factor domain YPO1047 884eb179a33cfe769963dc2d44f6206a 185 PANTHER PTHR20982 1 185 8.2E-82 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 YPO1047 884eb179a33cfe769963dc2d44f6206a 185 Gene3D G3DSA:1.10.132.20 67 184 1.0E-43 T 22-04-2016 IPR023584 Ribosome recycling factor domain YPO1027 2ca3e917b4fe92a51ed98cea490cbb2e 147 SUPERFAMILY SSF82649 3 144 1.2E-45 T 22-04-2016 YPO1027 2ca3e917b4fe92a51ed98cea490cbb2e 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 3 141 1.1E-78 T 22-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YPO1027 2ca3e917b4fe92a51ed98cea490cbb2e 147 PANTHER PTHR12735 2 146 3.4E-63 T 22-04-2016 YPO1027 2ca3e917b4fe92a51ed98cea490cbb2e 147 Pfam PF02657 Fe-S metabolism associated domain 18 138 3.1E-40 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 YPO1027 2ca3e917b4fe92a51ed98cea490cbb2e 147 Gene3D G3DSA:3.90.1010.10 2 144 3.3E-50 T 22-04-2016 YPO1027 2ca3e917b4fe92a51ed98cea490cbb2e 147 PANTHER PTHR12735:SF11 2 146 3.4E-63 T 22-04-2016 YPO0842 3dbe260e913c3673f43d14965909f04c 535 SUPERFAMILY SSF53649 32 58 2.76E-108 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO0842 3dbe260e913c3673f43d14965909f04c 535 SUPERFAMILY SSF53649 85 519 2.76E-108 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO0842 3dbe260e913c3673f43d14965909f04c 535 ProSitePatterns PS00149 Sulfatases signature 2. 151 161 - T 22-04-2016 IPR024607 Sulfatase, conserved site YPO0842 3dbe260e913c3673f43d14965909f04c 535 Gene3D G3DSA:3.30.1120.10 458 524 1.5E-22 T 22-04-2016 YPO0842 3dbe260e913c3673f43d14965909f04c 535 Gene3D G3DSA:3.30.1120.10 407 419 1.5E-22 T 22-04-2016 YPO0842 3dbe260e913c3673f43d14965909f04c 535 PANTHER PTHR10342 8 47 2.5E-160 T 22-04-2016 YPO0842 3dbe260e913c3673f43d14965909f04c 535 PANTHER PTHR10342 84 535 2.5E-160 T 22-04-2016 YPO0842 3dbe260e913c3673f43d14965909f04c 535 Pfam PF00884 Sulfatase 34 384 2.6E-73 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPO0842 3dbe260e913c3673f43d14965909f04c 535 Gene3D G3DSA:3.40.720.10 31 406 3.4E-96 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO0842 3dbe260e913c3673f43d14965909f04c 535 PANTHER PTHR10342:SF198 8 47 2.5E-160 T 22-04-2016 YPO0842 3dbe260e913c3673f43d14965909f04c 535 PANTHER PTHR10342:SF198 84 535 2.5E-160 T 22-04-2016 YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.8E-70 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.6E-28 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 SUPERFAMILY SSF54211 79 159 5.06E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 4.3E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 SUPERFAMILY SSF54768 9 75 4.08E-23 T 22-04-2016 YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 Gene3D G3DSA:3.30.230.10 76 159 6.3E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.65 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 Gene3D G3DSA:3.30.160.20 10 72 6.8E-30 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPO0226 4dcad5d817dc46b1d4f40d1f04561136 167 PANTHER PTHR13718 10 164 5.2E-80 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 YPO1356 fd244d5826dec5e8b17c10cba6cdfb1a 496 SUPERFAMILY SSF51735 1 301 3.98E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1356 fd244d5826dec5e8b17c10cba6cdfb1a 496 Pfam PF11066 Protein of unknown function (DUF2867) 340 469 1.2E-12 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 YPO1356 fd244d5826dec5e8b17c10cba6cdfb1a 496 PANTHER PTHR10366 5 244 6.4E-210 T 22-04-2016 YPO1356 fd244d5826dec5e8b17c10cba6cdfb1a 496 PANTHER PTHR10366 265 324 6.4E-210 T 22-04-2016 YPO1356 fd244d5826dec5e8b17c10cba6cdfb1a 496 PANTHER PTHR10366:SF439 5 244 6.4E-210 T 22-04-2016 YPO1356 fd244d5826dec5e8b17c10cba6cdfb1a 496 PANTHER PTHR10366:SF439 265 324 6.4E-210 T 22-04-2016 YPO1356 fd244d5826dec5e8b17c10cba6cdfb1a 496 Gene3D G3DSA:3.40.50.720 2 235 6.6E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1356 fd244d5826dec5e8b17c10cba6cdfb1a 496 Pfam PF13460 NAD(P)H-binding 10 154 2.8E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0470 e6da1e0997ac243344326574e19cd4fc 394 Pfam PF06965 Na+/H+ antiporter 1 7 380 1.7E-150 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YPO0470 e6da1e0997ac243344326574e19cd4fc 394 PANTHER PTHR30341:SF0 1 394 8.1E-218 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YPO0470 e6da1e0997ac243344326574e19cd4fc 394 Gene3D G3DSA:1.20.1530.10 4 384 3.7E-157 T 22-04-2016 IPR023171 Na/H antiporter domain YPO0470 e6da1e0997ac243344326574e19cd4fc 394 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 6.0E-174 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YPO0470 e6da1e0997ac243344326574e19cd4fc 394 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 388 23.599 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YPO0470 e6da1e0997ac243344326574e19cd4fc 394 PANTHER PTHR30341 1 394 8.1E-218 T 22-04-2016 YPO3781 b5318eaf41af3a4c24bc1dbc09f1d789 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPO3781 b5318eaf41af3a4c24bc1dbc09f1d789 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.304 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPO3781 b5318eaf41af3a4c24bc1dbc09f1d789 251 PANTHER PTHR10108 1 251 9.9E-189 T 22-04-2016 YPO3781 b5318eaf41af3a4c24bc1dbc09f1d789 251 SUPERFAMILY SSF53335 19 248 2.48E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3781 b5318eaf41af3a4c24bc1dbc09f1d789 251 Gene3D G3DSA:3.40.50.150 24 247 3.2E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3781 b5318eaf41af3a4c24bc1dbc09f1d789 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPO3781 b5318eaf41af3a4c24bc1dbc09f1d789 251 PANTHER PTHR10108:SF864 1 251 9.9E-189 T 22-04-2016 YPO3781 b5318eaf41af3a4c24bc1dbc09f1d789 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 6.7E-87 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPO3781 b5318eaf41af3a4c24bc1dbc09f1d789 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 250 9.7E-107 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPO2556 dbcf7288dc25175603d8506895b3d353 310 PANTHER PTHR30579:SF4 6 302 2.6E-222 T 22-04-2016 YPO2556 dbcf7288dc25175603d8506895b3d353 310 Pfam PF03466 LysR substrate binding domain 98 273 9.9E-28 T 22-04-2016 IPR005119 LysR, substrate-binding YPO2556 dbcf7288dc25175603d8506895b3d353 310 SUPERFAMILY SSF46785 11 119 2.13E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2556 dbcf7288dc25175603d8506895b3d353 310 Gene3D G3DSA:3.40.190.10 97 196 8.1E-15 T 22-04-2016 YPO2556 dbcf7288dc25175603d8506895b3d353 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 6.7E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2556 dbcf7288dc25175603d8506895b3d353 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2556 dbcf7288dc25175603d8506895b3d353 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2556 dbcf7288dc25175603d8506895b3d353 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2556 dbcf7288dc25175603d8506895b3d353 310 PANTHER PTHR30579 6 302 2.6E-222 T 22-04-2016 YPO2556 dbcf7288dc25175603d8506895b3d353 310 Gene3D G3DSA:3.40.190.10 197 245 8.4E-11 T 22-04-2016 YPO2556 dbcf7288dc25175603d8506895b3d353 310 SUPERFAMILY SSF53850 96 289 1.14E-29 T 22-04-2016 YPO2556 dbcf7288dc25175603d8506895b3d353 310 Gene3D G3DSA:1.10.10.10 10 90 4.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1041 02bfd66cca228252532f2d221f2c9105 274 PANTHER PTHR19136:SF52 13 273 1.5E-137 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPO1041 02bfd66cca228252532f2d221f2c9105 274 SUPERFAMILY SSF51161 1 256 8.18E-80 T 22-04-2016 IPR011004 Trimeric LpxA-like YPO1041 02bfd66cca228252532f2d221f2c9105 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 5.6E-25 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPO1041 02bfd66cca228252532f2d221f2c9105 274 PANTHER PTHR19136 13 273 1.5E-137 T 22-04-2016 YPO1041 02bfd66cca228252532f2d221f2c9105 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.8E-159 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPO1041 02bfd66cca228252532f2d221f2c9105 274 Gene3D G3DSA:1.10.166.10 1 70 4.0E-32 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPO1041 02bfd66cca228252532f2d221f2c9105 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.625 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YPO1041 02bfd66cca228252532f2d221f2c9105 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.4E-4 T 22-04-2016 IPR001451 Hexapeptide repeat YPO1041 02bfd66cca228252532f2d221f2c9105 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 7.2E-12 T 22-04-2016 IPR001451 Hexapeptide repeat YPO1041 02bfd66cca228252532f2d221f2c9105 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO1041 02bfd66cca228252532f2d221f2c9105 274 Gene3D G3DSA:2.160.10.10 89 255 5.2E-63 T 22-04-2016 YPO3464 65bcd2d1704d03a933c6ddf8811b706a 193 PANTHER PTHR23117 1 180 2.2E-102 T 22-04-2016 YPO3464 65bcd2d1704d03a933c6ddf8811b706a 193 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 9.2E-66 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 YPO3464 65bcd2d1704d03a933c6ddf8811b706a 193 Gene3D G3DSA:3.40.50.300 3 24 7.7E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3464 65bcd2d1704d03a933c6ddf8811b706a 193 Gene3D G3DSA:3.40.50.300 72 178 7.7E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3464 65bcd2d1704d03a933c6ddf8811b706a 193 PANTHER PTHR23117:SF8 1 180 2.2E-102 T 22-04-2016 YPO3464 65bcd2d1704d03a933c6ddf8811b706a 193 Pfam PF13238 AAA domain 5 138 1.2E-8 T 22-04-2016 YPO3464 65bcd2d1704d03a933c6ddf8811b706a 193 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 178 36.483 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 YPO3464 65bcd2d1704d03a933c6ddf8811b706a 193 SMART SM00072 1 181 1.7E-12 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPO3464 65bcd2d1704d03a933c6ddf8811b706a 193 SUPERFAMILY SSF52540 1 177 1.13E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 PANTHER PTHR11552 1 553 1.0E-261 T 22-04-2016 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 PIRSF PIRSF000137 1 542 1.8E-141 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 2.9E-282 T 22-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 PANTHER PTHR11552:SF135 1 553 1.0E-261 T 22-04-2016 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 Pfam PF00732 GMC oxidoreductase 3 300 4.0E-98 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 Gene3D G3DSA:3.50.50.60 190 318 8.0E-123 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 Gene3D G3DSA:3.50.50.60 2 127 8.0E-123 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 Gene3D G3DSA:3.50.50.60 470 532 8.0E-123 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 Pfam PF05199 GMC oxidoreductase 393 527 6.8E-42 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 SUPERFAMILY SSF51905 1 293 6.62E-91 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 SUPERFAMILY SSF51905 476 535 6.62E-91 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 SUPERFAMILY SSF54373 295 477 4.81E-62 T 22-04-2016 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 61.595 T 22-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 YPO1165 78de26b5de5dd9738f5559e662ffc5f0 567 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 Pfam PF14842 FliG N-terminal domain 23 117 5.0E-20 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 Gene3D G3DSA:1.10.220.30 24 88 7.0E-10 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 PANTHER PTHR30534:SF0 8 347 5.3E-92 T 22-04-2016 YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 SUPERFAMILY SSF48029 131 338 5.23E-50 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 SUPERFAMILY SSF48029 23 123 1.01E-15 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 Pfam PF01706 FliG C-terminal domain 232 337 3.2E-25 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 PANTHER PTHR30534 8 347 5.3E-92 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 Pfam PF14841 FliG middle domain 133 199 1.2E-20 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 21 37 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 286 312 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 262 282 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 240 260 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 50 76 2.1E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 Gene3D G3DSA:1.10.220.30 211 345 9.4E-25 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO0715 645e3fffa9cae717d72aac203fd0f4df 347 Gene3D G3DSA:1.10.220.30 92 210 2.4E-25 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 SUPERFAMILY SSF51126 81 353 9.42E-66 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 PANTHER PTHR32093:SF41 1 556 5.1E-139 T 22-04-2016 YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 PANTHER PTHR32093 2470 2478 5.1E-139 T 22-04-2016 YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 PANTHER PTHR32093 1 556 5.1E-139 T 22-04-2016 YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 SMART SM00912 92 212 4.0E-45 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF13332 Haemagluttinin repeat 1526 1682 4.9E-9 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF13332 Haemagluttinin repeat 1460 1524 2.3E-4 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF13332 Haemagluttinin repeat 1754 1929 1.4E-43 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF04829 Pre-toxin domain with VENN motif 2283 2333 1.9E-22 T 22-04-2016 IPR006914 VENN motif-containing domain YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Gene3D G3DSA:2.160.20.10 80 371 2.3E-99 T 22-04-2016 IPR012334 Pectin lyase fold YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 PANTHER PTHR32093:SF41 2470 2478 5.1E-139 T 22-04-2016 YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 841 867 0.063 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 687 725 0.31 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 357 392 2.0E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 645 675 0.096 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1239 1276 0.013 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 625 663 0.062 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 517 548 0.019 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF05594 Haemagluttinin repeat 320 377 1.8E-4 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF05594 Haemagluttinin repeat 684 744 0.34 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF05594 Haemagluttinin repeat 600 673 79.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF05594 Haemagluttinin repeat 1214 1272 3.1 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF05594 Haemagluttinin repeat 933 974 67.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF05594 Haemagluttinin repeat 517 576 0.16 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF13018 Extended Signal Peptide of Type V secretion system 5 28 5.6E-6 T 22-04-2016 IPR024973 ESPR domain YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 111 207 6.2E-21 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO2490 e4af39dd5faeaa9acd1f38643867ee2a 2535 Pfam PF05860 haemagglutination activity domain 78 211 9.7E-32 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO0097 6f74659b251ea078ae7018cbe922f2b2 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO0097 6f74659b251ea078ae7018cbe922f2b2 340 Gene3D G3DSA:3.30.420.10 118 288 6.6E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0097 6f74659b251ea078ae7018cbe922f2b2 340 SUPERFAMILY SSF46689 12 86 1.31E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0097 6f74659b251ea078ae7018cbe922f2b2 340 PANTHER PTHR35004:SF1 1 305 1.0E-94 T 22-04-2016 YPO0097 6f74659b251ea078ae7018cbe922f2b2 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0097 6f74659b251ea078ae7018cbe922f2b2 340 SUPERFAMILY SSF53098 118 287 9.41E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0097 6f74659b251ea078ae7018cbe922f2b2 340 PANTHER PTHR35004 1 305 1.0E-94 T 22-04-2016 YPO0097 6f74659b251ea078ae7018cbe922f2b2 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 YPO1021 5c196ee13252ab9eb7757d501087f858 652 Pfam PF13538 UvrD-like helicase C-terminal domain 575 621 2.4E-15 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain YPO1021 5c196ee13252ab9eb7757d501087f858 652 Pfam PF13604 AAA domain 175 337 3.6E-32 T 22-04-2016 YPO1021 5c196ee13252ab9eb7757d501087f858 652 PANTHER PTHR10887 171 344 1.1E-95 T 22-04-2016 YPO1021 5c196ee13252ab9eb7757d501087f858 652 SUPERFAMILY SSF52540 386 417 4.07E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 5c196ee13252ab9eb7757d501087f858 652 SUPERFAMILY SSF52540 473 646 4.07E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 5c196ee13252ab9eb7757d501087f858 652 SUPERFAMILY SSF52540 300 340 4.07E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 5c196ee13252ab9eb7757d501087f858 652 SUPERFAMILY SSF52540 6 399 3.09E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 5c196ee13252ab9eb7757d501087f858 652 Gene3D G3DSA:3.40.50.300 172 315 3.8E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 5c196ee13252ab9eb7757d501087f858 652 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 7 646 2.0E-185 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 YPO1021 5c196ee13252ab9eb7757d501087f858 652 PANTHER PTHR10887:SF351 171 344 1.1E-95 T 22-04-2016 YPO1021 5c196ee13252ab9eb7757d501087f858 652 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 646 54.053 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 YPO1021 5c196ee13252ab9eb7757d501087f858 652 Gene3D G3DSA:3.40.50.300 457 503 7.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 5c196ee13252ab9eb7757d501087f858 652 Gene3D G3DSA:3.40.50.300 393 419 7.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 5c196ee13252ab9eb7757d501087f858 652 Gene3D G3DSA:3.40.50.300 316 329 7.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 5c196ee13252ab9eb7757d501087f858 652 Gene3D G3DSA:3.40.50.300 563 634 7.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3205 7b41a020f895695e85526dfacbdde5f0 229 PANTHER PTHR26402:SF576 3 229 2.6E-155 T 22-04-2016 YPO3205 7b41a020f895695e85526dfacbdde5f0 229 Gene3D G3DSA:3.40.50.2300 3 124 1.5E-40 T 22-04-2016 YPO3205 7b41a020f895695e85526dfacbdde5f0 229 Pfam PF00072 Response regulator receiver domain 5 117 9.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3205 7b41a020f895695e85526dfacbdde5f0 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.0E-114 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 YPO3205 7b41a020f895695e85526dfacbdde5f0 229 Gene3D G3DSA:1.10.10.10 129 226 1.3E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3205 7b41a020f895695e85526dfacbdde5f0 229 SMART SM00448 3 116 1.3E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3205 7b41a020f895695e85526dfacbdde5f0 229 PANTHER PTHR26402 3 229 2.6E-155 T 22-04-2016 YPO3205 7b41a020f895695e85526dfacbdde5f0 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.3E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO3205 7b41a020f895695e85526dfacbdde5f0 229 SMART SM00862 150 225 3.2E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO3205 7b41a020f895695e85526dfacbdde5f0 229 SUPERFAMILY SSF46894 129 226 3.68E-32 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO3205 7b41a020f895695e85526dfacbdde5f0 229 SUPERFAMILY SSF52172 3 126 1.08E-42 T 22-04-2016 IPR011006 CheY-like superfamily YPO1680 89d3c26a612b93f78aaf8b52f795972f 129 SUPERFAMILY SSF52172 5 125 1.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily YPO1680 89d3c26a612b93f78aaf8b52f795972f 129 SMART SM00448 6 120 7.7E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1680 89d3c26a612b93f78aaf8b52f795972f 129 Pfam PF00072 Response regulator receiver domain 9 120 9.5E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1680 89d3c26a612b93f78aaf8b52f795972f 129 PANTHER PTHR26402 6 126 1.0E-41 T 22-04-2016 YPO1680 89d3c26a612b93f78aaf8b52f795972f 129 Gene3D G3DSA:3.40.50.2300 4 126 6.7E-39 T 22-04-2016 YPO3754 6722da5c5b244a10848ad71305d92091 394 Gene3D G3DSA:2.40.30.10 209 298 1.6E-36 T 22-04-2016 YPO3754 6722da5c5b244a10848ad71305d92091 394 SUPERFAMILY SSF52540 6 219 8.65E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3754 6722da5c5b244a10848ad71305d92091 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.7E-59 T 22-04-2016 YPO3754 6722da5c5b244a10848ad71305d92091 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.2E-237 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPO3754 6722da5c5b244a10848ad71305d92091 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.3E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPO3754 6722da5c5b244a10848ad71305d92091 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.224 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPO3754 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3754 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3754 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3754 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3754 6722da5c5b244a10848ad71305d92091 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO3754 6722da5c5b244a10848ad71305d92091 394 Gene3D G3DSA:3.40.50.300 3 208 6.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3754 6722da5c5b244a10848ad71305d92091 394 PANTHER PTHR23115:SF151 1 393 0.0 T 22-04-2016 YPO3754 6722da5c5b244a10848ad71305d92091 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.4E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO3754 6722da5c5b244a10848ad71305d92091 394 SUPERFAMILY SSF50447 205 301 1.75E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO3754 6722da5c5b244a10848ad71305d92091 394 PANTHER PTHR23115 1 393 0.0 T 22-04-2016 YPO3754 6722da5c5b244a10848ad71305d92091 394 SUPERFAMILY SSF50465 298 393 1.78E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPO3754 6722da5c5b244a10848ad71305d92091 394 Gene3D G3DSA:2.40.30.10 300 393 1.4E-46 T 22-04-2016 YPO3754 6722da5c5b244a10848ad71305d92091 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPO3754 6722da5c5b244a10848ad71305d92091 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PANTHER PTHR23522:SF3 1 404 9.7E-80 T 22-04-2016 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 Pfam PF01306 LacY proton/sugar symporter 2 391 1.4E-183 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PRINTS PR00174 LacY proton/sugar symporter family signature 131 149 2.7E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PRINTS PR00174 LacY proton/sugar symporter family signature 301 320 2.7E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PRINTS PR00174 LacY proton/sugar symporter family signature 246 267 2.7E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PRINTS PR00174 LacY proton/sugar symporter family signature 270 296 2.7E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PRINTS PR00174 LacY proton/sugar symporter family signature 54 83 2.7E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PRINTS PR00174 LacY proton/sugar symporter family signature 89 111 2.7E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PRINTS PR00174 LacY proton/sugar symporter family signature 200 228 2.7E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PRINTS PR00174 LacY proton/sugar symporter family signature 332 352 2.7E-106 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 Gene3D G3DSA:1.20.1250.20 195 389 7.1E-42 T 22-04-2016 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 Gene3D G3DSA:1.20.1250.20 2 179 1.2E-32 T 22-04-2016 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 3 387 2.8E-184 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 PANTHER PTHR23522 1 404 9.7E-80 T 22-04-2016 YPO1582 f23dbaa648a8deeac0547b2340506f01 414 SUPERFAMILY SSF103473 2 386 1.06E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPMT1.46c bb2ab7cda1ba328111f24d866b9ea9f4 111 PANTHER PTHR24031:SF249 4 111 3.2E-34 T 22-04-2016 YPMT1.46c bb2ab7cda1ba328111f24d866b9ea9f4 111 PANTHER PTHR24031 4 111 3.2E-34 T 22-04-2016 YPMT1.46c bb2ab7cda1ba328111f24d866b9ea9f4 111 Gene3D G3DSA:3.40.50.300 2 101 1.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPMT1.46c bb2ab7cda1ba328111f24d866b9ea9f4 111 SUPERFAMILY SSF52540 3 100 1.28E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPMT1.46c bb2ab7cda1ba328111f24d866b9ea9f4 111 Pfam PF00270 DEAD/DEAH box helicase 4 94 1.7E-11 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO0580 e2ec43ef09de10193c4b8b4066ba0ba9 483 PANTHER PTHR30524 2 483 0.0 T 22-04-2016 YPO0580 e2ec43ef09de10193c4b8b4066ba0ba9 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 6.4E-28 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YPO0580 e2ec43ef09de10193c4b8b4066ba0ba9 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 458 4.0E-69 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YPO0580 e2ec43ef09de10193c4b8b4066ba0ba9 483 SUPERFAMILY SSF48179 273 482 5.44E-51 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO0580 e2ec43ef09de10193c4b8b4066ba0ba9 483 SUPERFAMILY SSF51735 2 263 2.09E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0580 e2ec43ef09de10193c4b8b4066ba0ba9 483 Gene3D G3DSA:3.40.50.720 3 263 2.8E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0580 e2ec43ef09de10193c4b8b4066ba0ba9 483 Gene3D G3DSA:1.10.1040.10 272 482 4.6E-68 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO0580 e2ec43ef09de10193c4b8b4066ba0ba9 483 PANTHER PTHR30524:SF1 2 483 0.0 T 22-04-2016 YPO0580 e2ec43ef09de10193c4b8b4066ba0ba9 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 53.356 T 22-04-2016 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58|UniPathway: UPA00246 YPO0460 c10e95095483977bdff48fa3890365fe 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 8.2E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YPO0460 c10e95095483977bdff48fa3890365fe 309 Gene3D G3DSA:3.30.230.10 1 161 6.7E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0460 c10e95095483977bdff48fa3890365fe 309 Gene3D G3DSA:3.30.70.890 169 298 2.4E-41 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPO0460 c10e95095483977bdff48fa3890365fe 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 YPO0460 c10e95095483977bdff48fa3890365fe 309 SUPERFAMILY SSF55060 173 289 5.4E-33 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPO0460 c10e95095483977bdff48fa3890365fe 309 Pfam PF08544 GHMP kinases C terminal 215 280 2.8E-8 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPO0460 c10e95095483977bdff48fa3890365fe 309 SUPERFAMILY SSF54211 1 178 3.11E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0460 c10e95095483977bdff48fa3890365fe 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 307 6.1E-113 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 YPO0460 c10e95095483977bdff48fa3890365fe 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 29.916 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 YPO0460 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.7E-32 T 22-04-2016 YPO0460 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.7E-32 T 22-04-2016 YPO0460 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.7E-32 T 22-04-2016 YPO0460 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.7E-32 T 22-04-2016 YPO0460 c10e95095483977bdff48fa3890365fe 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.7E-32 T 22-04-2016 YPO0460 c10e95095483977bdff48fa3890365fe 309 PANTHER PTHR20861 1 309 2.6E-132 T 22-04-2016 YPO0460 c10e95095483977bdff48fa3890365fe 309 PANTHER PTHR20861:SF1 1 309 2.6E-132 T 22-04-2016 YPO0460 c10e95095483977bdff48fa3890365fe 309 PIRSF PIRSF000676 1 308 7.7E-83 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 YPO3306 d08a5374d6263e7d0df7e51e83c9c83b 187 Hamap MF_01114 Regulatory protein RecX [recX]. 2 187 15.055 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 YPO3306 d08a5374d6263e7d0df7e51e83c9c83b 187 Gene3D G3DSA:1.10.10.10 137 184 9.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3306 d08a5374d6263e7d0df7e51e83c9c83b 187 Gene3D G3DSA:1.10.10.10 91 136 9.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3306 d08a5374d6263e7d0df7e51e83c9c83b 187 Gene3D G3DSA:1.10.10.10 5 32 3.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3306 d08a5374d6263e7d0df7e51e83c9c83b 187 Gene3D G3DSA:1.10.10.10 74 90 3.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3306 d08a5374d6263e7d0df7e51e83c9c83b 187 Pfam PF02631 RecX family 72 183 7.6E-32 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 YPO3306 d08a5374d6263e7d0df7e51e83c9c83b 187 PANTHER PTHR33602 68 181 2.8E-51 T 22-04-2016 YPO3306 d08a5374d6263e7d0df7e51e83c9c83b 187 PANTHER PTHR33602 1 26 2.8E-51 T 22-04-2016 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 Pfam PF02253 Phospholipase A1 43 288 1.7E-98 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 Gene3D G3DSA:2.40.230.10 37 291 6.5E-104 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 PANTHER PTHR40457 1 292 2.1E-176 T 22-04-2016 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 SUPERFAMILY SSF56931 39 291 1.83E-94 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 239 256 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 261 281 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3834 efacd3dde81d132b4963149daf0bc2ad 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 206 224 6.1E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YPO3615 691d805ab90354e8155da6770173c9af 1512 PANTHER PTHR32305 1089 1512 0.0 T 22-04-2016 YPO3615 691d805ab90354e8155da6770173c9af 1512 PANTHER PTHR32305 128 997 0.0 T 22-04-2016 YPO3615 691d805ab90354e8155da6770173c9af 1512 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 624 664 5.1E-6 T 22-04-2016 IPR006530 YD repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 645 684 0.0024 T 22-04-2016 IPR006530 YD repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 776 814 5.0E-4 T 22-04-2016 IPR006530 YD repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 910 949 1.7E-8 T 22-04-2016 IPR006530 YD repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 610 644 0.0035 T 22-04-2016 IPR006530 YD repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 818 858 9.3E-6 T 22-04-2016 IPR006530 YD repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1165 1195 1.0E-4 T 22-04-2016 IPR006530 YD repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 840 880 1.4E-5 T 22-04-2016 IPR006530 YD repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 Pfam PF05488 PAAR motif 183 247 5.4E-16 T 22-04-2016 IPR008727 PAAR motif YPO3615 691d805ab90354e8155da6770173c9af 1512 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1298 1377 3.2E-25 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPO3615 691d805ab90354e8155da6770173c9af 1512 PANTHER PTHR32305:SF6 1089 1512 0.0 T 22-04-2016 YPO3615 691d805ab90354e8155da6770173c9af 1512 PANTHER PTHR32305:SF6 128 997 0.0 T 22-04-2016 YPO3615 691d805ab90354e8155da6770173c9af 1512 Pfam PF05593 RHS Repeat 1165 1193 2.8E-5 T 22-04-2016 IPR031325 RHS repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 Pfam PF05593 RHS Repeat 840 874 1.2E-5 T 22-04-2016 IPR031325 RHS repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 Pfam PF05593 RHS Repeat 1140 1180 1.5E-5 T 22-04-2016 IPR031325 RHS repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 Pfam PF05593 RHS Repeat 776 812 5.9E-5 T 22-04-2016 IPR031325 RHS repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 Pfam PF05593 RHS Repeat 645 682 3.0E-6 T 22-04-2016 IPR031325 RHS repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 Pfam PF05593 RHS Repeat 910 939 1.5E-4 T 22-04-2016 IPR031325 RHS repeat YPO3615 691d805ab90354e8155da6770173c9af 1512 Pfam PF03527 RHS protein 1270 1302 1.2E-10 T 22-04-2016 IPR001826 RHS protein YPO1425a 683495676bdde6db13b2669ef9372726 327 PANTHER PTHR11712:SF273 6 327 1.2E-143 T 22-04-2016 YPO1425a 683495676bdde6db13b2669ef9372726 327 Gene3D G3DSA:3.40.47.10 6 173 7.9E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1425a 683495676bdde6db13b2669ef9372726 327 Gene3D G3DSA:3.40.47.10 177 325 7.7E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1425a 683495676bdde6db13b2669ef9372726 327 SUPERFAMILY SSF53901 129 325 8.57E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1425a 683495676bdde6db13b2669ef9372726 327 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 7 160 4.3E-36 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1425a 683495676bdde6db13b2669ef9372726 327 SMART SM00825 Beta-ketoacyl synthase 16 327 5.7E-10 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1425a 683495676bdde6db13b2669ef9372726 327 SUPERFAMILY SSF53901 8 167 1.67E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1425a 683495676bdde6db13b2669ef9372726 327 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 67 83 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YPO1425a 683495676bdde6db13b2669ef9372726 327 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 168 281 4.5E-36 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1425a 683495676bdde6db13b2669ef9372726 327 PANTHER PTHR11712 6 327 1.2E-143 T 22-04-2016 YPO1177 d710080f9de6837c0c536819675a6811 571 Gene3D G3DSA:3.30.43.10 6 105 1.1E-6 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPO1177 d710080f9de6837c0c536819675a6811 571 Gene3D G3DSA:3.30.1370.20 436 520 3.5E-45 T 22-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPO1177 d710080f9de6837c0c536819675a6811 571 PANTHER PTHR11748 2 192 6.3E-66 T 22-04-2016 YPO1177 d710080f9de6837c0c536819675a6811 571 PANTHER PTHR11748 243 318 6.3E-66 T 22-04-2016 YPO1177 d710080f9de6837c0c536819675a6811 571 Gene3D G3DSA:3.30.465.10 108 269 8.6E-84 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPO1177 d710080f9de6837c0c536819675a6811 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 279 568 2.9E-145 T 22-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPO1177 d710080f9de6837c0c536819675a6811 571 Gene3D G3DSA:3.30.70.610 339 435 2.6E-23 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPO1177 d710080f9de6837c0c536819675a6811 571 Gene3D G3DSA:3.30.70.610 270 338 3.4E-22 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPO1177 d710080f9de6837c0c536819675a6811 571 PIRSF PIRSF000101 5 570 1.0E-289 T 22-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YPO1177 d710080f9de6837c0c536819675a6811 571 SUPERFAMILY SSF56176 13 272 8.18E-71 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPO1177 d710080f9de6837c0c536819675a6811 571 PANTHER PTHR11748:SF82 2 192 6.3E-66 T 22-04-2016 YPO1177 d710080f9de6837c0c536819675a6811 571 PANTHER PTHR11748:SF82 243 318 6.3E-66 T 22-04-2016 YPO1177 d710080f9de6837c0c536819675a6811 571 Pfam PF01565 FAD binding domain 48 170 3.1E-8 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPO1177 d710080f9de6837c0c536819675a6811 571 SUPERFAMILY SSF55103 276 568 3.27E-113 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 PANTHER PTHR11986 7 413 0.0 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 Gene3D G3DSA:3.40.640.10 60 309 6.4E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 265 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 406 45.581 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 SUPERFAMILY SSF53383 16 402 4.08E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 409 1.6E-225 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 403 2.3E-156 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 Pfam PF00202 Aminotransferase class-III 22 401 3.6E-122 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 PANTHER PTHR11986:SF71 7 413 0.0 T 22-04-2016 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 Hamap MF_01173 Succinylornithine transaminase [astC]. 3 414 76.525 T 22-04-2016 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81|UniPathway: UPA00185 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 Gene3D G3DSA:3.90.1150.10 312 406 5.1E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1962 e87de9ad5cfe4aa34255fb09ad92eace 414 Gene3D G3DSA:3.90.1150.10 10 59 5.1E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1098 1b750c1417bfde5618687f0e81bd7c34 399 PANTHER PTHR30629 2 394 1.4E-167 T 22-04-2016 YPO1098 1b750c1417bfde5618687f0e81bd7c34 399 Gene3D G3DSA:1.10.150.130 109 203 5.0E-15 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPO1098 1b750c1417bfde5618687f0e81bd7c34 399 Pfam PF00589 Phage integrase family 214 377 4.4E-28 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO1098 1b750c1417bfde5618687f0e81bd7c34 399 Gene3D G3DSA:1.10.443.10 215 382 7.1E-23 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO1098 1b750c1417bfde5618687f0e81bd7c34 399 Pfam PF13356 Domain of unknown function (DUF4102) 8 91 3.4E-16 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YPO1098 1b750c1417bfde5618687f0e81bd7c34 399 SUPERFAMILY SSF56349 109 386 2.21E-56 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPO1098 1b750c1417bfde5618687f0e81bd7c34 399 PANTHER PTHR30629:SF2 2 394 1.4E-167 T 22-04-2016 YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 SMART SM00859 3 146 1.8E-53 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 2.5E-33 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 2.0E-14 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 Gene3D G3DSA:3.40.50.720 1 162 1.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 2.6E-127 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 SUPERFAMILY SSF51735 2 182 2.12E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 SUPERFAMILY SSF55347 154 308 2.99E-49 T 22-04-2016 YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.775 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 Gene3D G3DSA:3.30.360.10 163 308 2.2E-48 T 22-04-2016 YPO3927 7584d2bbcf9a54c9df94f8f8785d865a 334 PANTHER PTHR32338 1 334 1.7E-166 T 22-04-2016 YPO3000 5fe737d90ec261dffd4bff4a70f786fe 678 PANTHER PTHR24220:SF86 12 241 1.1E-104 T 22-04-2016 YPO3000 5fe737d90ec261dffd4bff4a70f786fe 678 Gene3D G3DSA:3.40.50.300 10 241 8.7E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3000 5fe737d90ec261dffd4bff4a70f786fe 678 Pfam PF00005 ABC transporter 30 178 3.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3000 5fe737d90ec261dffd4bff4a70f786fe 678 SUPERFAMILY SSF52540 10 241 2.13E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3000 5fe737d90ec261dffd4bff4a70f786fe 678 PANTHER PTHR24220 12 241 1.1E-104 T 22-04-2016 YPO3000 5fe737d90ec261dffd4bff4a70f786fe 678 SMART SM00382 39 226 2.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3000 5fe737d90ec261dffd4bff4a70f786fe 678 Pfam PF02687 FtsX-like permease family 557 671 3.6E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPO3000 5fe737d90ec261dffd4bff4a70f786fe 678 Pfam PF12704 MacB-like periplasmic core domain 302 519 1.8E-38 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPO3000 5fe737d90ec261dffd4bff4a70f786fe 678 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 8.8E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 8.8E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 3.9E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 PANTHER PTHR24567 5 250 9.6E-137 T 22-04-2016 YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 PANTHER PTHR24567:SF28 5 250 9.6E-137 T 22-04-2016 YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 SMART SM00100 30 151 3.1E-21 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 SMART SM00419 187 235 1.7E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 Gene3D G3DSA:2.60.120.10 18 169 8.5E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 1.8E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 SUPERFAMILY SSF46785 165 245 3.79E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 Gene3D G3DSA:1.10.10.10 170 235 3.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2300 216fecabe9a72f0b28c00148fb6e3ef6 250 SUPERFAMILY SSF51206 23 162 4.06E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.4E-44 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.595 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 Gene3D G3DSA:3.30.300.10 401 525 1.4E-53 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 Pfam PF02540 NAD synthase 223 254 6.4E-6 T 22-04-2016 IPR022310 NAD/GMP synthase YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 SUPERFAMILY SSF52317 4 204 1.1E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 SUPERFAMILY SSF54810 405 525 1.57E-51 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 Gene3D G3DSA:3.40.50.620 209 399 9.4E-56 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 PRINTS PR00097 Anthranilate synthase component II signature 10 24 4.4E-6 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 4.4E-6 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.4E-6 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 3.1E-154 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 PANTHER PTHR11922:SF2 3 522 2.2E-286 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 Gene3D G3DSA:3.40.50.880 9 204 2.2E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.5E-6 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.5E-6 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.5E-6 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 1.7E-80 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 3.7E-38 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 PANTHER PTHR11922 3 522 2.2E-286 T 22-04-2016 YPO2870 5f76fa2b14d8e1e1ce9a83b599e1f931 525 SUPERFAMILY SSF52402 197 420 1.87E-55 T 22-04-2016 YPO4017 688f6cd344bd209d759e0a683615626f 563 Gene3D G3DSA:3.40.1770.10 360 555 8.0E-164 T 22-04-2016 YPO4017 688f6cd344bd209d759e0a683615626f 563 Gene3D G3DSA:3.40.1770.10 9 141 8.0E-164 T 22-04-2016 YPO4017 688f6cd344bd209d759e0a683615626f 563 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 50.062 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO4017 688f6cd344bd209d759e0a683615626f 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 2.6E-303 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO4017 688f6cd344bd209d759e0a683615626f 563 PIRSF PIRSF001423 2 561 2.6E-293 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO4017 688f6cd344bd209d759e0a683615626f 563 Pfam PF01175 Urocanase 12 547 3.8E-260 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO4017 688f6cd344bd209d759e0a683615626f 563 PANTHER PTHR12216 6 558 0.0 T 22-04-2016 YPO4017 688f6cd344bd209d759e0a683615626f 563 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO4017 688f6cd344bd209d759e0a683615626f 563 SUPERFAMILY SSF111326 7 555 7.72E-261 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO4017 688f6cd344bd209d759e0a683615626f 563 PANTHER PTHR12216:SF3 6 558 0.0 T 22-04-2016 YPO4017 688f6cd344bd209d759e0a683615626f 563 Gene3D G3DSA:3.40.50.10730 142 349 3.0E-93 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 SMART SM00926 54 114 2.9E-7 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 12 808 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 Pfam PF01568 Molydopterin dinucleotide binding domain 689 800 2.5E-28 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 725 752 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 77 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 Gene3D G3DSA:2.40.40.20 663 808 3.5E-50 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 Gene3D G3DSA:2.20.25.90 52 118 2.9E-13 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 Pfam PF00384 Molybdopterin oxidoreductase 117 567 1.4E-76 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 SUPERFAMILY SSF53706 57 690 1.96E-155 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 Gene3D G3DSA:3.40.50.740 119 197 3.4E-65 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 Gene3D G3DSA:3.40.50.740 404 647 3.4E-65 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 PANTHER PTHR11615:SF128 3 312 7.0E-303 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 PANTHER PTHR11615:SF128 344 808 7.0E-303 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 42 2.5E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 PANTHER PTHR11615 3 312 7.0E-303 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 PANTHER PTHR11615 344 808 7.0E-303 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 Gene3D G3DSA:3.40.228.10 198 403 1.2E-63 T 22-04-2016 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 58 113 1.0E-7 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO2965 0538dfce83f4212a42ecaf1a6263dfb3 808 SUPERFAMILY SSF50692 634 808 6.84E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPO0047 951acb8d0671ec1c3b1b9b58500112c4 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.47 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 YPO0047 951acb8d0671ec1c3b1b9b58500112c4 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 1.1E-49 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 YPO0047 951acb8d0671ec1c3b1b9b58500112c4 151 SUPERFAMILY SSF51283 1 150 6.15E-56 T 22-04-2016 IPR029054 dUTPase-like YPO0047 951acb8d0671ec1c3b1b9b58500112c4 151 Pfam PF00692 dUTPase 16 149 2.3E-43 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 YPO0047 951acb8d0671ec1c3b1b9b58500112c4 151 Gene3D G3DSA:2.70.40.10 5 150 2.0E-54 T 22-04-2016 IPR029054 dUTPase-like YPO0047 951acb8d0671ec1c3b1b9b58500112c4 151 PANTHER PTHR11241 1 150 5.7E-57 T 22-04-2016 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 PANTHER PTHR24423:SF354 180 451 5.9E-70 T 22-04-2016 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 6 456 1.5E-120 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 Gene3D G3DSA:3.30.565.10 293 456 7.4E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 SUPERFAMILY SSF55874 295 451 1.11E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 PANTHER PTHR24423:SF354 3 10 5.9E-70 T 22-04-2016 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 SUPERFAMILY SSF158472 188 232 6.02E-5 T 22-04-2016 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 SMART SM00388 240 306 1.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 PANTHER PTHR24423 3 10 5.9E-70 T 22-04-2016 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 SUPERFAMILY SSF47384 223 307 4.71E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 SMART SM00387 349 460 5.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 SMART SM00304 186 239 1.5E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 Pfam PF00672 HAMP domain 166 233 8.7E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 451 1.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 306 2.0E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 Gene3D G3DSA:1.10.287.130 232 292 7.7E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2000 0fa14a8ff832ec4fd40277fe20df4618 463 PANTHER PTHR24423 180 451 5.9E-70 T 22-04-2016 YPO1400 fde537e3711c34f9bb5bc0357722fa5e 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.6E-123 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YPO1400 fde537e3711c34f9bb5bc0357722fa5e 250 Gene3D G3DSA:3.90.550.10 1 247 1.4E-85 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1400 fde537e3711c34f9bb5bc0357722fa5e 250 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.648 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YPO1400 fde537e3711c34f9bb5bc0357722fa5e 250 SUPERFAMILY SSF53448 3 247 4.51E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1400 fde537e3711c34f9bb5bc0357722fa5e 250 Pfam PF02348 Cytidylyltransferase 4 221 4.5E-68 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YPO1400 fde537e3711c34f9bb5bc0357722fa5e 250 PANTHER PTHR21485 1 250 3.0E-125 T 22-04-2016 YPO1400 fde537e3711c34f9bb5bc0357722fa5e 250 PANTHER PTHR21485:SF4 1 250 3.0E-125 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YPO1451 e3700496176f47263cec4553c3755779 805 Gene3D G3DSA:3.40.630.30 171 319 7.3E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1451 e3700496176f47263cec4553c3755779 805 Pfam PF01565 FAD binding domain 389 525 3.7E-29 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPO1451 e3700496176f47263cec4553c3755779 805 SUPERFAMILY SSF56176 372 555 1.45E-38 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPO1451 e3700496176f47263cec4553c3755779 805 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 389 422 - T 22-04-2016 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 YPO1451 e3700496176f47263cec4553c3755779 805 Gene3D G3DSA:3.30.43.10 386 445 3.6E-9 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPO1451 e3700496176f47263cec4553c3755779 805 PANTHER PTHR11748 329 794 1.6E-173 T 22-04-2016 YPO1451 e3700496176f47263cec4553c3755779 805 PANTHER PTHR11748:SF75 329 794 1.6E-173 T 22-04-2016 YPO1451 e3700496176f47263cec4553c3755779 805 SUPERFAMILY SSF55729 175 334 3.8E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1451 e3700496176f47263cec4553c3755779 805 Pfam PF13480 Acetyltransferase (GNAT) domain 187 322 1.0E-10 T 22-04-2016 YPO1451 e3700496176f47263cec4553c3755779 805 Gene3D G3DSA:3.30.465.10 446 540 2.4E-9 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 PANTHER PTHR30579:SF2 1 296 3.6E-160 T 22-04-2016 YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.444 T 22-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 PANTHER PTHR30579 1 296 3.6E-160 T 22-04-2016 YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 SUPERFAMILY SSF46785 4 110 6.16E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 Gene3D G3DSA:1.10.10.10 1 73 4.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 1.7E-110 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 SUPERFAMILY SSF53850 93 290 2.53E-19 T 22-04-2016 YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 Pfam PF03466 LysR substrate binding domain 93 287 2.6E-13 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0916 92db65c5b5d3ac6c726effcea5ab76f8 302 Gene3D G3DSA:3.40.190.10 92 196 3.6E-40 T 22-04-2016 YPO3157 362ac2313fc273dfaa85f46876b919bc 207 PANTHER PTHR10381:SF22 2 206 8.6E-142 T 22-04-2016 YPO3157 362ac2313fc273dfaa85f46876b919bc 207 PANTHER PTHR10381 2 206 8.6E-142 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPO3157 362ac2313fc273dfaa85f46876b919bc 207 SUPERFAMILY SSF52096 23 206 8.08E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO3157 362ac2313fc273dfaa85f46876b919bc 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 43.839 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPO3157 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPO3157 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPO3157 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPO3157 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPO3157 362ac2313fc273dfaa85f46876b919bc 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.4E-52 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPO3157 362ac2313fc273dfaa85f46876b919bc 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 22-04-2016 IPR033135 ClpP, histidine active site YPO3157 362ac2313fc273dfaa85f46876b919bc 207 Gene3D G3DSA:3.90.226.10 16 205 3.0E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO3157 362ac2313fc273dfaa85f46876b919bc 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 22-04-2016 IPR018215 ClpP, Ser active site YPO3157 362ac2313fc273dfaa85f46876b919bc 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 1.5E-108 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YPO3157 362ac2313fc273dfaa85f46876b919bc 207 Pfam PF00574 Clp protease 25 205 2.5E-88 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPO2369 6def81f06c05c6d3614de62f865048a3 424 Gene3D G3DSA:3.10.290.10 322 423 4.8E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO2369 6def81f06c05c6d3614de62f865048a3 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 8.1E-144 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPO2369 6def81f06c05c6d3614de62f865048a3 424 Gene3D G3DSA:3.40.50.620 3 237 9.5E-105 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2369 6def81f06c05c6d3614de62f865048a3 424 PANTHER PTHR11766:SF0 4 424 2.4E-222 T 22-04-2016 YPO2369 6def81f06c05c6d3614de62f865048a3 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 3.2E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPO2369 6def81f06c05c6d3614de62f865048a3 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 3.2E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPO2369 6def81f06c05c6d3614de62f865048a3 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 3.2E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPO2369 6def81f06c05c6d3614de62f865048a3 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 3.2E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YPO2369 6def81f06c05c6d3614de62f865048a3 424 SUPERFAMILY SSF52374 4 328 1.82E-108 T 22-04-2016 YPO2369 6def81f06c05c6d3614de62f865048a3 424 Gene3D G3DSA:1.10.240.10 238 321 1.2E-41 T 22-04-2016 YPO2369 6def81f06c05c6d3614de62f865048a3 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.034 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 YPO2369 6def81f06c05c6d3614de62f865048a3 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.8E-91 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2369 6def81f06c05c6d3614de62f865048a3 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2369 6def81f06c05c6d3614de62f865048a3 424 SMART SM00363 357 419 0.0049 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO2369 6def81f06c05c6d3614de62f865048a3 424 Pfam PF01479 S4 domain 359 400 2.4E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO2369 6def81f06c05c6d3614de62f865048a3 424 PANTHER PTHR11766 4 424 2.4E-222 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 YPO2369 6def81f06c05c6d3614de62f865048a3 424 SUPERFAMILY SSF55174 327 423 1.1E-20 T 22-04-2016 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 SUPERFAMILY SSF53187 179 496 4.71E-125 T 22-04-2016 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.9E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 PANTHER PTHR11963:SF13 7 503 2.6E-269 T 22-04-2016 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.266 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 SUPERFAMILY SSF52949 1 184 4.06E-52 T 22-04-2016 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 PANTHER PTHR11963 7 503 2.6E-269 T 22-04-2016 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 Gene3D G3DSA:3.40.220.10 1 161 2.3E-66 T 22-04-2016 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 Gene3D G3DSA:3.40.630.10 171 496 6.1E-137 T 22-04-2016 YPO3441 7ad71a1f2c030b9dfec2d874630aa917 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 8.9E-118 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPO3483 fc2c6335e0ef42dee41c3077c515d52c 386 Gene3D G3DSA:2.40.50.100 165 198 3.3E-26 T 22-04-2016 YPO3483 fc2c6335e0ef42dee41c3077c515d52c 386 Gene3D G3DSA:2.40.50.100 58 90 3.3E-26 T 22-04-2016 YPO3483 fc2c6335e0ef42dee41c3077c515d52c 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 365 2.0E-81 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO3483 fc2c6335e0ef42dee41c3077c515d52c 386 SUPERFAMILY SSF111369 44 290 5.36E-79 T 22-04-2016 YPO3483 fc2c6335e0ef42dee41c3077c515d52c 386 PANTHER PTHR30158 5 385 1.9E-146 T 22-04-2016 YPO3483 fc2c6335e0ef42dee41c3077c515d52c 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 283 3.0E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO3483 fc2c6335e0ef42dee41c3077c515d52c 386 PANTHER PTHR30158:SF3 5 385 1.9E-146 T 22-04-2016 YPO2995 4e45ab29893a18a545e66a480a42821a 169 SUPERFAMILY SSF51261 12 167 4.36E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif YPO2995 4e45ab29893a18a545e66a480a42821a 169 PANTHER PTHR30175 1 118 5.1E-57 T 22-04-2016 YPO2995 4e45ab29893a18a545e66a480a42821a 169 Gene3D G3DSA:2.70.70.10 14 167 1.5E-60 T 22-04-2016 YPO2995 4e45ab29893a18a545e66a480a42821a 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2995 4e45ab29893a18a545e66a480a42821a 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 3.2E-50 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2995 4e45ab29893a18a545e66a480a42821a 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.1E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 PANTHER PTHR10799 37 185 5.9E-52 T 22-04-2016 YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 PANTHER PTHR10799 283 406 5.9E-52 T 22-04-2016 YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 408 1.7E-45 T 22-04-2016 IPR000160 GGDEF domain YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 406 8.8E-49 T 22-04-2016 IPR000160 GGDEF domain YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 SMART SM00267 240 414 6.2E-65 T 22-04-2016 IPR000160 GGDEF domain YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 SUPERFAMILY SSF55073 256 410 4.94E-47 T 22-04-2016 IPR029787 Nucleotide cyclase YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 Gene3D G3DSA:3.30.70.270 253 413 7.6E-53 T 22-04-2016 YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 PANTHER PTHR10799:SF774 37 185 5.9E-52 T 22-04-2016 YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 PANTHER PTHR10799:SF774 283 406 5.9E-52 T 22-04-2016 YPO0449 6dc82d3f0bc49bd7bd88e3e216462f04 425 Pfam PF17152 Periplasmic sensor domain 47 148 1.4E-30 T 22-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 YPO0664 a264fbdf510f077e983dfc44e53e81cc 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 4.9E-78 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 YPO0664 a264fbdf510f077e983dfc44e53e81cc 210 PANTHER PTHR11839 1 210 1.1E-134 T 22-04-2016 YPO0664 a264fbdf510f077e983dfc44e53e81cc 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPO0664 a264fbdf510f077e983dfc44e53e81cc 210 Pfam PF00293 NUDIX domain 59 179 5.3E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO0664 a264fbdf510f077e983dfc44e53e81cc 210 Gene3D G3DSA:3.90.79.10 6 206 2.2E-55 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO0664 a264fbdf510f077e983dfc44e53e81cc 210 PANTHER PTHR11839:SF5 1 210 1.1E-134 T 22-04-2016 YPO0664 a264fbdf510f077e983dfc44e53e81cc 210 SUPERFAMILY SSF55811 9 205 2.03E-49 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO2827 cafcf28fa34854d7ab4b0d07c9ae6835 208 PANTHER PTHR10285 1 197 1.2E-101 T 22-04-2016 YPO2827 cafcf28fa34854d7ab4b0d07c9ae6835 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.831 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 YPO2827 cafcf28fa34854d7ab4b0d07c9ae6835 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.3E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO2827 cafcf28fa34854d7ab4b0d07c9ae6835 208 SUPERFAMILY SSF53271 4 206 7.47E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO2827 cafcf28fa34854d7ab4b0d07c9ae6835 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 3.0E-89 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 YPO2827 cafcf28fa34854d7ab4b0d07c9ae6835 208 Gene3D G3DSA:3.40.50.2020 2 208 6.3E-74 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 PANTHER PTHR10815:SF5 1 167 1.5E-62 T 22-04-2016 YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 9 83 8.0E-12 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 1.6E-37 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 Gene3D G3DSA:1.10.10.10 86 168 5.2E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 SUPERFAMILY SSF53155 7 92 3.18E-6 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 169 37.657 T 22-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 PANTHER PTHR10815 1 167 1.5E-62 T 22-04-2016 YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 3.2E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPO2299 a7882f9c8a5327a7b5abac011b53d4b9 172 SUPERFAMILY SSF46767 86 169 3.92E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPO2390 e16837be7431cdd9959a17109a6c478f 383 SUPERFAMILY SSF53335 117 370 1.62E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2390 e16837be7431cdd9959a17109a6c478f 383 Gene3D G3DSA:3.40.50.150 117 371 1.1E-92 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2390 e16837be7431cdd9959a17109a6c478f 383 PIRSF PIRSF003085 6 379 2.2E-124 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 YPO2390 e16837be7431cdd9959a17109a6c478f 383 PANTHER PTHR10108:SF795 305 371 4.3E-108 T 22-04-2016 YPO2390 e16837be7431cdd9959a17109a6c478f 383 PANTHER PTHR10108:SF795 27 289 4.3E-108 T 22-04-2016 YPO2390 e16837be7431cdd9959a17109a6c478f 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 4.3E-101 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2390 e16837be7431cdd9959a17109a6c478f 383 PANTHER PTHR10108 305 371 4.3E-108 T 22-04-2016 YPO2390 e16837be7431cdd9959a17109a6c478f 383 PANTHER PTHR10108 27 289 4.3E-108 T 22-04-2016 YPO3899 29517221d8a9ea65eea864c3670fab01 308 Gene3D G3DSA:3.20.10.10 134 294 1.2E-56 T 22-04-2016 YPO3899 29517221d8a9ea65eea864c3670fab01 308 SUPERFAMILY SSF56752 6 306 2.09E-105 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPO3899 29517221d8a9ea65eea864c3670fab01 308 PANTHER PTHR11825 1 305 4.1E-134 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPO3899 29517221d8a9ea65eea864c3670fab01 308 Pfam PF01063 Amino-transferase class IV 35 267 1.3E-48 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YPO3899 29517221d8a9ea65eea864c3670fab01 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 4.5E-144 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 YPO3899 29517221d8a9ea65eea864c3670fab01 308 Gene3D G3DSA:3.30.470.10 6 129 2.0E-44 T 22-04-2016 YPO3899 29517221d8a9ea65eea864c3670fab01 308 PANTHER PTHR11825:SF7 1 305 4.1E-134 T 22-04-2016 YPO3899 29517221d8a9ea65eea864c3670fab01 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PANTHER PTHR24322 9 136 6.1E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PANTHER PTHR24322 152 183 6.1E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 Gene3D G3DSA:3.40.50.720 7 213 1.6E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PANTHER PTHR24322:SF57 9 136 6.1E-45 T 22-04-2016 YPO1993 5471ff4497bf34d72f896090120eaf0f 226 PANTHER PTHR24322:SF57 152 183 6.1E-45 T 22-04-2016 YPO1993 5471ff4497bf34d72f896090120eaf0f 226 Pfam PF00106 short chain dehydrogenase 7 189 2.3E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 5471ff4497bf34d72f896090120eaf0f 226 SUPERFAMILY SSF51735 7 213 5.46E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 Gene3D G3DSA:2.115.10.20 104 349 1.6E-109 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 Gene3D G3DSA:2.115.10.20 2 49 1.6E-109 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 107 345 3.4E-53 T 22-04-2016 IPR007184 Mannoside phosphorylase YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 SUPERFAMILY SSF75005 2 48 9.42E-77 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 SUPERFAMILY SSF75005 103 341 9.42E-77 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 PANTHER PTHR34106:SF2 1 56 1.4E-136 T 22-04-2016 YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 PANTHER PTHR34106:SF2 97 349 1.4E-136 T 22-04-2016 YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 PANTHER PTHR34106 1 56 1.4E-136 T 22-04-2016 YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 PANTHER PTHR34106 97 349 1.4E-136 T 22-04-2016 YPO2474 825d7d01dcd13e2980cd9aad1d947d08 351 PIRSF PIRSF016202 3 351 4.5E-115 T 22-04-2016 IPR007184 Mannoside phosphorylase YPO1937 9d85cdb6f8dfe32f1a0363444a1c6e3f 508 PANTHER PTHR11785 1 505 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1937 9d85cdb6f8dfe32f1a0363444a1c6e3f 508 PIRSF PIRSF006060 19 483 9.7E-63 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1937 9d85cdb6f8dfe32f1a0363444a1c6e3f 508 ProSitePatterns PS00218 Amino acid permeases signature. 58 88 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPO1937 9d85cdb6f8dfe32f1a0363444a1c6e3f 508 PANTHER PTHR11785:SF25 1 505 0.0 T 22-04-2016 YPO1937 9d85cdb6f8dfe32f1a0363444a1c6e3f 508 Pfam PF00324 Amino acid permease 33 471 3.2E-121 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPO1445 282365fc364266a1231ee08d4e682e51 396 SUPERFAMILY SSF88697 4 72 8.45E-16 T 22-04-2016 IPR015947 PUA-like domain YPO1445 282365fc364266a1231ee08d4e682e51 396 Gene3D G3DSA:3.40.50.150 185 395 1.6E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1445 282365fc364266a1231ee08d4e682e51 396 PANTHER PTHR11061 5 396 4.8E-125 T 22-04-2016 YPO1445 282365fc364266a1231ee08d4e682e51 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 67.868 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO1445 282365fc364266a1231ee08d4e682e51 396 SMART SM00359 3 88 5.9E-12 T 22-04-2016 IPR002478 PUA domain GO:0003723 YPO1445 282365fc364266a1231ee08d4e682e51 396 SUPERFAMILY SSF53335 79 392 2.39E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1445 282365fc364266a1231ee08d4e682e51 396 PANTHER PTHR11061:SF12 5 396 4.8E-125 T 22-04-2016 YPO1445 282365fc364266a1231ee08d4e682e51 396 Gene3D G3DSA:3.30.750.80 74 180 9.5E-35 T 22-04-2016 YPO1445 282365fc364266a1231ee08d4e682e51 396 Gene3D G3DSA:2.30.130.10 4 72 1.6E-25 T 22-04-2016 IPR015947 PUA-like domain YPO1445 282365fc364266a1231ee08d4e682e51 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 174 370 4.1E-27 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 PANTHER PTHR11751 13 97 1.0E-58 T 22-04-2016 YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 PANTHER PTHR11751:SF402 13 97 1.0E-58 T 22-04-2016 YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 SUPERFAMILY SSF46785 11 87 2.65E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 163.765 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 SMART SM00345 12 71 1.0E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 Gene3D G3DSA:1.20.120.530 80 236 7.4E-66 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 SUPERFAMILY SSF48008 79 230 3.01E-66 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 Gene3D G3DSA:1.10.10.10 8 76 3.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 Pfam PF07840 FadR C-terminal domain 72 234 3.9E-74 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 YPO2144 2fb848b9bc1d3a681f33b86de2866633 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 1.5E-122 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 YPO3271 03e7d5af06be86b4782e3cf3d27606c4 249 Pfam PF03942 DTW domain 45 229 8.5E-44 T 22-04-2016 IPR005636 DTW YPO3271 03e7d5af06be86b4782e3cf3d27606c4 249 PANTHER PTHR21392:SF1 15 238 6.5E-134 T 22-04-2016 YPO3271 03e7d5af06be86b4782e3cf3d27606c4 249 PANTHER PTHR21392 15 238 6.5E-134 T 22-04-2016 YPO3271 03e7d5af06be86b4782e3cf3d27606c4 249 SMART SM01144 42 234 4.3E-75 T 22-04-2016 IPR005636 DTW YPO0232 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPO0232 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Gene3D G3DSA:3.30.420.80 9 129 1.2E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPO0232 c1ca87aaced6c0e7222f5c1f70ff2d28 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site YPO0232 c1ca87aaced6c0e7222f5c1f70ff2d28 129 SUPERFAMILY SSF53137 15 129 4.58E-48 T 22-04-2016 YPO0232 c1ca87aaced6c0e7222f5c1f70ff2d28 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.735 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPO0232 c1ca87aaced6c0e7222f5c1f70ff2d28 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.8E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0232 c1ca87aaced6c0e7222f5c1f70ff2d28 129 PANTHER PTHR11759 11 129 9.3E-74 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPO0232 c1ca87aaced6c0e7222f5c1f70ff2d28 129 PIRSF PIRSF002131 1 129 1.1E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YPO2056 f7080578c14816d77898f28a8a81e08d 173 PANTHER PTHR30194 1 169 1.9E-75 T 22-04-2016 YPO2056 f7080578c14816d77898f28a8a81e08d 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.828 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPO2056 f7080578c14816d77898f28a8a81e08d 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.2E-65 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPO2056 f7080578c14816d77898f28a8a81e08d 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 2.7E-80 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPO2056 f7080578c14816d77898f28a8a81e08d 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 YPO2056 f7080578c14816d77898f28a8a81e08d 173 Gene3D G3DSA:3.30.420.10 3 156 9.1E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2056 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPO2056 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPO2056 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPO2056 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPO2056 f7080578c14816d77898f28a8a81e08d 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YPO2056 f7080578c14816d77898f28a8a81e08d 173 SUPERFAMILY SSF53098 3 156 4.55E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1200 0db67984d2082000e799de600c480b33 444 PANTHER PTHR11785 5 444 3.4E-190 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1200 0db67984d2082000e799de600c480b33 444 Pfam PF13520 Amino acid permease 10 401 8.7E-49 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1200 0db67984d2082000e799de600c480b33 444 PANTHER PTHR11785:SF259 5 444 3.4E-190 T 22-04-2016 YPO1200 0db67984d2082000e799de600c480b33 444 PIRSF PIRSF006060 1 431 1.7E-61 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 SUPERFAMILY SSF56037 346 454 5.49E-31 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 PANTHER PTHR11807:SF2 21 446 3.8E-113 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 311 23.358 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 Pfam PF01171 PP-loop family 24 202 4.5E-58 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 SUPERFAMILY SSF82829 238 321 3.92E-25 T 22-04-2016 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 Gene3D G3DSA:3.40.50.620 20 183 3.2E-11 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 Pfam PF11734 TilS substrate C-terminal domain 381 453 2.4E-26 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 PANTHER PTHR11807 21 446 3.8E-113 T 22-04-2016 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 Pfam PF09179 TilS substrate binding domain 252 319 2.8E-20 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 381 425 7.5E-13 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 SMART SM00977 381 453 2.4E-26 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 207 4.2E-53 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YPO1062 dc621f7c827793c2e9f9147a260f02c3 460 SUPERFAMILY SSF52402 16 237 8.82E-61 T 22-04-2016 YPO1246 507128757ccf687158a25b5660d6f79a 468 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 21 120 2.0E-55 T 22-04-2016 IPR009826 DNA circulation, N-terminal YPO1246 507128757ccf687158a25b5660d6f79a 468 Pfam PF07157 DNA circularisation protein N-terminus 25 118 2.6E-33 T 22-04-2016 IPR009826 DNA circulation, N-terminal YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 PANTHER PTHR33823:SF2 8 149 3.3E-70 T 22-04-2016 YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 3.8E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.578 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 PANTHER PTHR33823 8 149 3.3E-70 T 22-04-2016 YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF109635 9 110 8.24E-37 T 22-04-2016 YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 22-04-2016 YPO3397 e48e7ebf611fae039bc107fa1fd6563d 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 6.3E-51 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 YPO2152 e625f6ee82cb455acf8d07767592b838 424 Pfam PF04285 Protein of unknown function (DUF444) 4 420 1.0E-186 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 YPO2152 e625f6ee82cb455acf8d07767592b838 424 PANTHER PTHR30510 1 424 1.8E-199 T 22-04-2016 YPO2152 e625f6ee82cb455acf8d07767592b838 424 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 41.936 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 PANTHER PTHR33121 438 784 3.8E-80 T 22-04-2016 YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 523 1.7E-40 T 22-04-2016 IPR000160 GGDEF domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 521 5.4E-46 T 22-04-2016 IPR000160 GGDEF domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 SMART SM00052 535 777 6.8E-112 T 22-04-2016 IPR001633 EAL domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 238 359 7.0E-13 T 22-04-2016 IPR000014 PAS domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 Gene3D G3DSA:3.30.70.270 366 533 3.3E-52 T 22-04-2016 YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 Pfam PF05228 CHASE4 domain 2 160 9.9E-18 T 22-04-2016 IPR007892 CHASE4 YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 Pfam PF00563 EAL domain 543 772 1.9E-70 T 22-04-2016 IPR001633 EAL domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 Pfam PF00989 PAS fold 241 349 6.2E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 SMART SM00267 353 525 1.0E-57 T 22-04-2016 IPR000160 GGDEF domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 SUPERFAMILY SSF141868 541 780 1.05E-87 T 22-04-2016 IPR001633 EAL domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 Gene3D G3DSA:3.30.450.20 232 351 8.6E-18 T 22-04-2016 YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 SUPERFAMILY SSF55785 231 351 3.54E-16 T 22-04-2016 IPR000014 PAS domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 Gene3D G3DSA:3.20.20.450 538 779 9.0E-93 T 22-04-2016 IPR001633 EAL domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 SUPERFAMILY SSF55073 369 526 1.02E-46 T 22-04-2016 IPR029787 Nucleotide cyclase YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 SMART SM00091 241 306 1.9E-5 T 22-04-2016 IPR000014 PAS domain YPO0998 9e3b6b5c556202a7b5f9887be6f37698 788 PANTHER PTHR33121:SF13 438 784 3.8E-80 T 22-04-2016 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 49.997 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 300 1.6E-82 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 Gene3D G3DSA:3.40.1450.10 80 311 4.0E-97 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 SUPERFAMILY SSF53649 5 79 6.8E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 SUPERFAMILY SSF53649 312 511 6.8E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 PIRSF PIRSF001492 1 515 3.4E-205 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 PANTHER PTHR31637 1 515 4.7E-296 T 22-04-2016 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 SUPERFAMILY SSF64158 79 311 1.7E-85 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 Gene3D G3DSA:3.40.720.10 316 511 3.7E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 Gene3D G3DSA:3.40.720.10 5 79 3.7E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 PANTHER PTHR31637:SF0 1 515 4.7E-296 T 22-04-2016 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 4.1E-238 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO0064 1a9f97b936ee6279a974c2c056b68053 515 Pfam PF01676 Metalloenzyme superfamily 6 501 2.5E-81 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YPO0103 2409a8f5766ea4714ead9159156f689f 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 8.3E-36 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPO0103 2409a8f5766ea4714ead9159156f689f 161 PANTHER PTHR33254 1 161 2.6E-110 T 22-04-2016 YPO0103 2409a8f5766ea4714ead9159156f689f 161 SUPERFAMILY SSF89562 2 158 4.71E-44 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPO0103 2409a8f5766ea4714ead9159156f689f 161 PANTHER PTHR33254:SF7 1 161 2.6E-110 T 22-04-2016 YPO0103 2409a8f5766ea4714ead9159156f689f 161 Gene3D G3DSA:3.50.30.40 1 156 3.7E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPO0103 2409a8f5766ea4714ead9159156f689f 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 7.1E-87 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 YPO0103 2409a8f5766ea4714ead9159156f689f 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.484 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 YPO0103 2409a8f5766ea4714ead9159156f689f 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.8E-62 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 YPO2830 57574e446e1b019e922f4251088ee482 181 PANTHER PTHR13256:SF21 1 178 6.7E-80 T 22-04-2016 YPO2830 57574e446e1b019e922f4251088ee482 181 SUPERFAMILY SSF55729 3 164 6.67E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2830 57574e446e1b019e922f4251088ee482 181 Gene3D G3DSA:3.40.630.30 3 165 2.9E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2830 57574e446e1b019e922f4251088ee482 181 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 6.1E-22 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO2830 57574e446e1b019e922f4251088ee482 181 PANTHER PTHR13256 1 178 6.7E-80 T 22-04-2016 YPO3190 f960c074e9032236624544264106ee68 121 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 31 113 3.1E-32 T 22-04-2016 IPR003849 Preprotein translocase YajC YPO3190 f960c074e9032236624544264106ee68 121 PANTHER PTHR33909:SF1 9 119 1.9E-35 T 22-04-2016 YPO3190 f960c074e9032236624544264106ee68 121 PRINTS PR01853 Bacterial YajC preprotein translocase signature 32 52 1.9E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC YPO3190 f960c074e9032236624544264106ee68 121 PRINTS PR01853 Bacterial YajC preprotein translocase signature 70 88 1.9E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC YPO3190 f960c074e9032236624544264106ee68 121 PANTHER PTHR33909 9 119 1.9E-35 T 22-04-2016 YPO3190 f960c074e9032236624544264106ee68 121 Pfam PF02699 Preprotein translocase subunit 34 110 3.9E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC YPO3190 f960c074e9032236624544264106ee68 121 SMART SM01323 30 113 1.7E-37 T 22-04-2016 IPR003849 Preprotein translocase YajC YPO4125 ed2affadf47d099a67b84bf9a92c5180 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.9E-59 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 YPO4125 ed2affadf47d099a67b84bf9a92c5180 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 6.4E-39 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YPO4125 ed2affadf47d099a67b84bf9a92c5180 156 PANTHER PTHR33445 1 156 3.5E-48 T 22-04-2016 YPO4125 ed2affadf47d099a67b84bf9a92c5180 156 Gene3D G3DSA:1.20.5.620 62 122 2.4E-25 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain YPO4125 ed2affadf47d099a67b84bf9a92c5180 156 SUPERFAMILY SSF81573 63 121 4.58E-15 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain YPO4125 ed2affadf47d099a67b84bf9a92c5180 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.264 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 268 386 1.9E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 141 183 1.9E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 6.0E-49 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 PIRSF PIRSF000429 1 387 2.8E-130 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 4 126 1.7E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 Gene3D G3DSA:3.40.47.10 184 267 1.7E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 SUPERFAMILY SSF53901 262 386 2.98E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 1.5E-81 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.34 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 SUPERFAMILY SSF53901 1 258 1.07E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 6.8E-141 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 PANTHER PTHR18919:SF69 1 387 5.2E-204 T 22-04-2016 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 PANTHER PTHR18919 1 387 5.2E-204 T 22-04-2016 YPO3767 c0c7890d8dd735cf219f4050491bb19c 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 386 1.7E-224 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO0428 e32fa7f4072ef72264b7779145254d29 145 PIRSF PIRSF029225 2 131 3.3E-55 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0428 e32fa7f4072ef72264b7779145254d29 145 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 2.0E-47 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0428 e32fa7f4072ef72264b7779145254d29 145 Gene3D G3DSA:3.40.50.10220 26 136 2.2E-43 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0428 e32fa7f4072ef72264b7779145254d29 145 SUPERFAMILY SSF102220 27 135 1.23E-36 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0428 e32fa7f4072ef72264b7779145254d29 145 Pfam PF03603 DNA polymerase III psi subunit 3 127 1.6E-48 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 SUPERFAMILY SSF55729 614 665 2.4E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3272 31d7b8958413c8ef62492b39230a6f53 880 SUPERFAMILY SSF55729 723 866 2.4E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3272 31d7b8958413c8ef62492b39230a6f53 880 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 2.2E-45 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain YPO3272 31d7b8958413c8ef62492b39230a6f53 880 SUPERFAMILY SSF52210 125 286 7.06E-37 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 SUPERFAMILY SSF56059 481 692 7.95E-26 T 22-04-2016 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 SUPERFAMILY SSF51735 2 136 2.03E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3272 31d7b8958413c8ef62492b39230a6f53 880 Pfam PF13549 ATP-grasp domain 472 694 1.7E-73 T 22-04-2016 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 SUPERFAMILY SSF52210 287 447 3.79E-38 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 Gene3D G3DSA:3.40.50.261 281 439 6.1E-13 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 PANTHER PTHR11117:SF8 29 699 3.9E-230 T 22-04-2016 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 SMART SM00881 9 104 8.8E-22 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 Gene3D G3DSA:3.40.50.261 128 279 2.6E-25 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 Gene3D G3DSA:3.40.50.720 1 127 1.6E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3272 31d7b8958413c8ef62492b39230a6f53 880 Pfam PF00583 Acetyltransferase (GNAT) family 790 864 3.2E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 Gene3D G3DSA:3.40.630.30 718 878 1.5E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3272 31d7b8958413c8ef62492b39230a6f53 880 PANTHER PTHR11117 29 699 3.9E-230 T 22-04-2016 YPO3272 31d7b8958413c8ef62492b39230a6f53 880 Pfam PF13380 CoA binding domain 13 129 1.5E-20 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPO0518 adbf8891e3f395640b4365747732c52e 789 SUPERFAMILY SSF53098 5 394 5.22E-91 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0518 adbf8891e3f395640b4365747732c52e 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 420 433 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 546 554 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 494 506 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 PANTHER PTHR10322 75 789 3.2E-222 T 22-04-2016 YPO0518 adbf8891e3f395640b4365747732c52e 789 ProSitePatterns PS00116 DNA polymerase family B signature. 548 556 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 209 301 2.6E-5 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 75 165 1.5E-4 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 SMART SM00486 151 560 4.0E-61 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 Gene3D G3DSA:3.90.1600.10 517 576 5.2E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 Gene3D G3DSA:3.90.1600.10 399 436 5.2E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 Pfam PF00136 DNA polymerase family B 383 742 6.0E-41 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO0518 adbf8891e3f395640b4365747732c52e 789 Gene3D G3DSA:3.30.420.10 151 368 6.3E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0518 adbf8891e3f395640b4365747732c52e 789 SUPERFAMILY SSF56672 390 783 6.12E-117 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 Pfam PF03734 L,D-transpeptidase catalytic domain 377 546 6.2E-29 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 SUPERFAMILY SSF141523 378 430 4.32E-19 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 SUPERFAMILY SSF141523 487 536 4.32E-19 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582:SF10 34 234 0.0 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582:SF10 471 616 0.0 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582:SF10 315 434 0.0 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 Gene3D G3DSA:1.10.101.10 215 252 5.9E-25 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPO1407 afa3a911adce840f14bf02524e1d51ab 618 Gene3D G3DSA:1.10.101.10 316 359 5.9E-25 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPO1407 afa3a911adce840f14bf02524e1d51ab 618 Pfam PF01471 Putative peptidoglycan binding domain 316 350 2.9E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPO1407 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582 34 234 0.0 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582 471 616 0.0 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 PANTHER PTHR30582 315 434 0.0 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 Gene3D G3DSA:2.40.440.10 489 537 6.7E-13 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 Gene3D G3DSA:2.40.440.10 372 421 6.7E-13 T 22-04-2016 YPO1407 afa3a911adce840f14bf02524e1d51ab 618 SUPERFAMILY SSF47090 315 358 4.24E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 SUPERFAMILY SSF51735 121 299 1.0E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 PANTHER PTHR11695 25 335 4.3E-137 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 Gene3D G3DSA:3.40.50.720 155 273 3.8E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 PANTHER PTHR11695:SF28 25 335 4.3E-137 T 22-04-2016 YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 SMART SM00829 20 334 5.0E-57 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 114 9.9E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 Gene3D G3DSA:3.90.180.10 10 154 9.1E-47 T 22-04-2016 IPR011032 GroES-like YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 Pfam PF00107 Zinc-binding dehydrogenase 161 285 1.9E-26 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 SUPERFAMILY SSF50129 11 149 1.48E-38 T 22-04-2016 IPR011032 GroES-like YPO1653 90521c0a503bb8d2ce081994a31d7c88 336 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 335 5.9E-150 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 SUPERFAMILY SSF47413 5 59 1.19E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 Gene3D G3DSA:3.40.50.300 231 400 1.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 Pfam PF13521 AAA domain 234 394 1.6E-33 T 22-04-2016 YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 SMART SM00530 6 62 5.0E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 PIRSF PIRSF004776 2 415 6.6E-221 T 22-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 SUPERFAMILY SSF52540 232 404 1.52E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 SUPERFAMILY SSF52374 65 229 5.09E-20 T 22-04-2016 YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 Gene3D G3DSA:3.40.50.620 64 230 6.5E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 PANTHER PTHR37512 14 417 8.1E-158 T 22-04-2016 YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 Pfam PF01381 Helix-turn-helix 7 58 2.8E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 1.8E-19 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 3.8E-154 T 22-04-2016 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 YPO0444 6b99e2a74f1f2aa67e04f6984419dcf1 423 Gene3D G3DSA:1.10.260.40 6 58 5.5E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3007 a66eb23e7358bc5513f7ac4760aa72af 509 SMART SM00327 132 311 7.5E-26 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO3007 a66eb23e7358bc5513f7ac4760aa72af 509 Pfam PF00092 von Willebrand factor type A domain 134 303 1.3E-22 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO3007 a66eb23e7358bc5513f7ac4760aa72af 509 PANTHER PTHR10579 90 462 1.4E-221 T 22-04-2016 YPO3007 a66eb23e7358bc5513f7ac4760aa72af 509 SUPERFAMILY SSF53300 130 306 4.17E-35 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO3007 a66eb23e7358bc5513f7ac4760aa72af 509 PANTHER PTHR10579:SF58 90 462 1.4E-221 T 22-04-2016 YPO3007 a66eb23e7358bc5513f7ac4760aa72af 509 Gene3D G3DSA:3.40.50.410 129 308 1.5E-27 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 SUPERFAMILY SSF52540 7 233 1.15E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 PANTHER PTHR24220:SF538 9 382 8.9E-254 T 22-04-2016 YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 Gene3D G3DSA:3.40.50.300 6 236 2.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 Gene3D G3DSA:3.40.50.300 271 492 3.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 Pfam PF00005 ABC transporter 23 174 2.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 Pfam PF00005 ABC transporter 274 428 2.5E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 PANTHER PTHR24220 9 382 8.9E-254 T 22-04-2016 YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 SMART SM00382 32 222 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 SMART SM00382 282 477 0.0012 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3634 9d15576d26a25d81d88a1850126fc3d6 498 SUPERFAMILY SSF52540 272 488 6.86E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0416 70ea0dcacb3468ef98b619192acdd456 346 Gene3D G3DSA:3.40.50.2000 1 153 1.6E-39 T 22-04-2016 YPO0416 70ea0dcacb3468ef98b619192acdd456 346 SUPERFAMILY SSF53756 1 340 2.04E-76 T 22-04-2016 YPO0416 70ea0dcacb3468ef98b619192acdd456 346 PANTHER PTHR30160 1 318 8.6E-99 T 22-04-2016 YPO0416 70ea0dcacb3468ef98b619192acdd456 346 Gene3D G3DSA:3.40.50.2000 167 340 1.4E-46 T 22-04-2016 YPO0416 70ea0dcacb3468ef98b619192acdd456 346 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 1 338 2.0E-116 T 22-04-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative KEGG: 00231+2.-.-.-|UniPathway: UPA00958 YPO0416 70ea0dcacb3468ef98b619192acdd456 346 PANTHER PTHR30160:SF1 1 318 8.6E-99 T 22-04-2016 YPO0416 70ea0dcacb3468ef98b619192acdd456 346 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 309 6.5E-47 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 160 4.3E-11 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 1.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 SUPERFAMILY SSF55874 289 455 3.93E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 PANTHER PTHR24423:SF553 178 456 1.3E-269 T 22-04-2016 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 PANTHER PTHR24423:SF553 1 134 1.3E-269 T 22-04-2016 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 SMART SM00388 238 300 1.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 Gene3D G3DSA:3.30.565.10 286 455 2.4E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 454 9.9E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 SMART SM00304 184 237 6.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 Gene3D G3DSA:1.10.287.130 228 285 6.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 SMART SM00387 345 455 1.6E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 Pfam PF00672 HAMP domain 165 233 7.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 SUPERFAMILY SSF47384 224 299 2.16E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 PANTHER PTHR24423 178 456 1.3E-269 T 22-04-2016 YPO0073 6d034cbcfcae5f81fd7fb165ab660657 458 PANTHER PTHR24423 1 134 1.3E-269 T 22-04-2016 YPO3561 6f828bb966a65b33441b6dba57f40701 213 Gene3D G3DSA:3.40.30.10 7 101 2.7E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3561 6f828bb966a65b33441b6dba57f40701 213 PANTHER PTHR11260 9 207 3.5E-129 T 22-04-2016 YPO3561 6f828bb966a65b33441b6dba57f40701 213 Gene3D G3DSA:1.20.1050.10 102 208 6.9E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO3561 6f828bb966a65b33441b6dba57f40701 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.4E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPO3561 6f828bb966a65b33441b6dba57f40701 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 4.5E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YPO3561 6f828bb966a65b33441b6dba57f40701 213 PANTHER PTHR11260:SF44 9 207 3.5E-129 T 22-04-2016 YPO3561 6f828bb966a65b33441b6dba57f40701 213 SUPERFAMILY SSF47616 82 208 1.08E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO3561 6f828bb966a65b33441b6dba57f40701 213 SUPERFAMILY SSF52833 11 110 1.39E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 3.0E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 SUPERFAMILY SSF52540 74 354 7.29E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 Gene3D G3DSA:3.40.50.300 3 210 6.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 SMART SM00490 256 337 2.5E-30 T 22-04-2016 IPR001650 Helicase, C-terminal YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 Pfam PF00271 Helicase conserved C-terminal domain 237 337 4.0E-28 T 22-04-2016 IPR001650 Helicase, C-terminal YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 PANTHER PTHR24031 1 439 1.1E-267 T 22-04-2016 YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 PANTHER PTHR24031:SF180 1 439 1.1E-267 T 22-04-2016 YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 460 73.482 T 22-04-2016 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 Pfam PF03880 DbpA RNA binding domain 387 457 5.4E-23 T 22-04-2016 IPR005580 DbpA, RNA-binding domain YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 SMART SM00487 23 220 4.4E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1776 eb43e41fba8fd40d38b465648765d0ca 460 Gene3D G3DSA:3.40.50.300 215 372 5.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1992 5c3129ab4a7b53acb03a6fb170124833 219 SUPERFAMILY SSF53335 36 207 6.52E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1992 5c3129ab4a7b53acb03a6fb170124833 219 Gene3D G3DSA:3.40.50.150 39 206 2.6E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1992 5c3129ab4a7b53acb03a6fb170124833 219 Pfam PF08242 Methyltransferase domain 54 151 4.6E-9 T 22-04-2016 IPR013217 Methyltransferase type 12 YPO1992 5c3129ab4a7b53acb03a6fb170124833 219 PIRSF PIRSF011491 1 219 3.2E-96 T 22-04-2016 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted YPO0366 5eb25bee2843936a51c0d44d0e82f330 181 Gene3D G3DSA:3.30.420.10 4 180 4.7E-71 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0366 5eb25bee2843936a51c0d44d0e82f330 181 SUPERFAMILY SSF53098 4 179 2.86E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0366 5eb25bee2843936a51c0d44d0e82f330 181 SMART SM00479 7 180 1.1E-20 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO0366 5eb25bee2843936a51c0d44d0e82f330 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.517 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 YPO0366 5eb25bee2843936a51c0d44d0e82f330 181 PANTHER PTHR11046 2 180 5.0E-129 T 22-04-2016 YPO0366 5eb25bee2843936a51c0d44d0e82f330 181 PANTHER PTHR11046:SF1 2 180 5.0E-129 T 22-04-2016 YPO0366 5eb25bee2843936a51c0d44d0e82f330 181 Pfam PF00929 Exonuclease 9 170 1.4E-34 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 SUPERFAMILY SSF56322 9 516 2.75E-165 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 PIRSF PIRSF001373 1 521 4.9E-250 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 18 516 1.4E-241 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 Gene3D G3DSA:3.60.120.10 8 517 1.9E-162 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 PANTHER PTHR11236:SF22 1 514 5.5E-280 T 22-04-2016 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 PRINTS PR00095 Anthranilate synthase component I signature 460 474 1.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 PRINTS PR00095 Anthranilate synthase component I signature 365 378 1.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 PRINTS PR00095 Anthranilate synthase component I signature 445 459 1.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 PRINTS PR00095 Anthranilate synthase component I signature 351 364 1.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 192 7.9E-16 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 Pfam PF00425 chorismate binding enzyme 243 503 6.1E-85 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPO2208 8ebb21760318a9c97ac35ecdd077c17c 521 PANTHER PTHR11236 1 514 5.5E-280 T 22-04-2016 YPO3941 fbefc36e601cdbdc481e55854ae10719 662 SMART SM00642 151 560 4.1E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO3941 fbefc36e601cdbdc481e55854ae10719 662 SUPERFAMILY SSF51011 576 629 2.09E-5 T 22-04-2016 YPO3941 fbefc36e601cdbdc481e55854ae10719 662 Gene3D G3DSA:2.60.40.1180 576 630 1.8E-4 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YPO3941 fbefc36e601cdbdc481e55854ae10719 662 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 638 6.0E-270 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 YPO3941 fbefc36e601cdbdc481e55854ae10719 662 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 13 95 9.3E-19 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 YPO3941 fbefc36e601cdbdc481e55854ae10719 662 Gene3D G3DSA:2.60.40.10 7 148 5.0E-51 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPO3941 fbefc36e601cdbdc481e55854ae10719 662 PANTHER PTHR10357 1 632 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO3941 fbefc36e601cdbdc481e55854ae10719 662 PANTHER PTHR10357:SF152 1 632 0.0 T 22-04-2016 YPO3941 fbefc36e601cdbdc481e55854ae10719 662 SUPERFAMILY SSF81296 7 144 6.44E-42 T 22-04-2016 IPR014756 Immunoglobulin E-set YPO3941 fbefc36e601cdbdc481e55854ae10719 662 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 660 76.235 T 22-04-2016 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 UniPathway: UPA00165 YPO3941 fbefc36e601cdbdc481e55854ae10719 662 Gene3D G3DSA:3.20.20.80 149 568 7.6E-105 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO3941 fbefc36e601cdbdc481e55854ae10719 662 SUPERFAMILY SSF51445 131 465 4.53E-122 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO3941 fbefc36e601cdbdc481e55854ae10719 662 SUPERFAMILY SSF51445 494 567 4.53E-122 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO3941 fbefc36e601cdbdc481e55854ae10719 662 Pfam PF00128 Alpha amylase, catalytic domain 186 291 9.6E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO0472 3e4d4a45eb2b8cfecfba22d75630d56c 87 SUPERFAMILY SSF46992 3 86 1.44E-31 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0472 3e4d4a45eb2b8cfecfba22d75630d56c 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.359 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0472 3e4d4a45eb2b8cfecfba22d75630d56c 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 1.0E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0472 3e4d4a45eb2b8cfecfba22d75630d56c 87 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0472 3e4d4a45eb2b8cfecfba22d75630d56c 87 PANTHER PTHR33398 2 86 4.8E-41 T 22-04-2016 YPO0472 3e4d4a45eb2b8cfecfba22d75630d56c 87 Gene3D G3DSA:1.20.58.110 3 87 1.9E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0472 3e4d4a45eb2b8cfecfba22d75630d56c 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.2E-33 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0968 9761d7453649fcd94b92893501dcbe6a 91 PANTHER PTHR33293 1 90 2.3E-32 T 22-04-2016 YPO0968 9761d7453649fcd94b92893501dcbe6a 91 Pfam PF03811 InsA N-terminal domain 1 36 1.8E-9 T 22-04-2016 IPR003220 InsA N-terminal domain GO:0006313 YPO0968 9761d7453649fcd94b92893501dcbe6a 91 Pfam PF12759 InsA C-terminal domain 43 88 5.7E-20 T 22-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPO2259 1013a1079dd1943eba885854c07ebd67 349 PANTHER PTHR22604:SF53 1 345 1.1E-137 T 22-04-2016 YPO2259 1013a1079dd1943eba885854c07ebd67 349 Gene3D G3DSA:3.40.50.720 1 129 6.1E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2259 1013a1079dd1943eba885854c07ebd67 349 Gene3D G3DSA:3.30.360.10 130 339 3.2E-33 T 22-04-2016 YPO2259 1013a1079dd1943eba885854c07ebd67 349 PANTHER PTHR22604 1 345 1.1E-137 T 22-04-2016 YPO2259 1013a1079dd1943eba885854c07ebd67 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 1.7E-13 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 YPO2259 1013a1079dd1943eba885854c07ebd67 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.0E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPO2259 1013a1079dd1943eba885854c07ebd67 349 SUPERFAMILY SSF51735 3 196 3.32E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2599 3d56a5f05ce2fdb89ee968bdc9d1e94b 229 Gene3D G3DSA:3.90.1550.10 3 203 6.5E-73 T 22-04-2016 YPO2599 3d56a5f05ce2fdb89ee968bdc9d1e94b 229 PIRSF PIRSF016262 1 213 2.6E-58 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPO2599 3d56a5f05ce2fdb89ee968bdc9d1e94b 229 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 203 3.4E-73 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPO2599 3d56a5f05ce2fdb89ee968bdc9d1e94b 229 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 5.0E-25 T 22-04-2016 YPO2599 3d56a5f05ce2fdb89ee968bdc9d1e94b 229 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.185 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPO2599 3d56a5f05ce2fdb89ee968bdc9d1e94b 229 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 2.3E-6 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 YPO2599 3d56a5f05ce2fdb89ee968bdc9d1e94b 229 SUPERFAMILY SSF55681 4 205 7.95E-70 T 22-04-2016 YPO2599 3d56a5f05ce2fdb89ee968bdc9d1e94b 229 PANTHER PTHR10993 1 220 8.4E-85 T 22-04-2016 YPO2599 3d56a5f05ce2fdb89ee968bdc9d1e94b 229 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPO1355 3dd796abd83915c96a96afde6db6ec4f 335 PANTHER PTHR10366 2 335 6.4E-209 T 22-04-2016 YPO1355 3dd796abd83915c96a96afde6db6ec4f 335 Gene3D G3DSA:3.90.25.10 238 330 4.8E-6 T 22-04-2016 YPO1355 3dd796abd83915c96a96afde6db6ec4f 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 2.2E-29 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO1355 3dd796abd83915c96a96afde6db6ec4f 335 Gene3D G3DSA:3.40.50.720 1 237 1.9E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1355 3dd796abd83915c96a96afde6db6ec4f 335 SUPERFAMILY SSF51735 1 268 2.77E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1355 3dd796abd83915c96a96afde6db6ec4f 335 SUPERFAMILY SSF51735 296 332 2.77E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1355 3dd796abd83915c96a96afde6db6ec4f 335 PANTHER PTHR10366:SF409 2 335 6.4E-209 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 472 486 2.8E-28 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 321 335 2.8E-28 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 2.8E-28 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 703 715 2.8E-28 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 607 618 2.8E-28 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 699 2.8E-28 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 SUPERFAMILY SSF55008 82 146 1.7E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 Gene3D G3DSA:3.30.70.100 82 145 1.0E-15 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 ProSitePatterns PS01047 Heavy-metal-associated domain. 88 117 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 Gene3D G3DSA:3.40.50.1000 610 748 1.8E-42 T 22-04-2016 IPR023214 HAD-like domain YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 Gene3D G3DSA:3.40.50.1000 448 485 1.8E-42 T 22-04-2016 IPR023214 HAD-like domain YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 Pfam PF00403 Heavy-metal-associated domain 87 143 7.9E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PANTHER PTHR24093:SF126 40 757 4.3E-263 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PANTHER PTHR24093 40 757 4.3E-263 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 Pfam PF00122 E1-E2 ATPase 242 463 2.6E-58 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 SUPERFAMILY SSF81653 274 371 3.66E-21 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 581 758 4.0E-38 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 244 494 2.4E-35 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 Pfam PF00702 haloacid dehalogenase-like hydrolase 470 692 3.1E-34 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00941 Cadmium-transporting ATPase signature 276 292 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00941 Cadmium-transporting ATPase signature 337 353 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00941 Cadmium-transporting ATPase signature 86 95 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00941 Cadmium-transporting ATPase signature 97 118 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 PRINTS PR00941 Cadmium-transporting ATPase signature 256 276 5.5E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 221 782 4.9E-172 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 Gene3D G3DSA:3.40.1110.10 486 609 2.1E-21 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 SUPERFAMILY SSF81665 729 768 4.45E-17 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 SUPERFAMILY SSF81665 372 466 4.45E-17 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 SUPERFAMILY SSF81665 224 275 4.45E-17 T 22-04-2016 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 Gene3D G3DSA:2.70.150.10 224 372 3.1E-25 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 474 480 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 SUPERFAMILY SSF56784 470 490 9.42E-52 T 22-04-2016 IPR023214 HAD-like domain YPO3820 0b11a8e225c8eba1490e0dda2b75a91b 788 SUPERFAMILY SSF56784 541 780 9.42E-52 T 22-04-2016 IPR023214 HAD-like domain YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 Gene3D G3DSA:3.40.50.2300 184 308 1.4E-17 T 22-04-2016 YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 PANTHER PTHR30146 7 332 5.7E-199 T 22-04-2016 YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 Gene3D G3DSA:1.10.260.40 8 59 1.0E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 4.2E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 SMART SM00354 7 77 4.5E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 SUPERFAMILY SSF53822 65 319 4.71E-39 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 Gene3D G3DSA:3.40.50.2300 60 183 2.2E-33 T 22-04-2016 YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 SUPERFAMILY SSF47413 7 65 1.97E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 Pfam PF13407 Periplasmic binding protein domain 68 314 6.5E-16 T 22-04-2016 IPR025997 Periplasmic binding protein YPO2498 e929c5e9bf791b4499bd2bdea608bb79 334 PANTHER PTHR30146:SF54 7 332 5.7E-199 T 22-04-2016 YPO4095 813609c5d77e5829695fca2abef2848f 361 Gene3D G3DSA:3.40.50.300 230 349 1.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4095 813609c5d77e5829695fca2abef2848f 361 Gene3D G3DSA:3.40.50.300 1 171 1.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4095 813609c5d77e5829695fca2abef2848f 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 YPO4095 813609c5d77e5829695fca2abef2848f 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 2.7E-132 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YPO4095 813609c5d77e5829695fca2abef2848f 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 342 8.0E-39 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal YPO4095 813609c5d77e5829695fca2abef2848f 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 99.109 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YPO4095 813609c5d77e5829695fca2abef2848f 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 YPO4095 813609c5d77e5829695fca2abef2848f 361 SUPERFAMILY SSF52540 1 340 1.59E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4095 813609c5d77e5829695fca2abef2848f 361 PANTHER PTHR32182 1 356 1.5E-76 T 22-04-2016 YPO4095 813609c5d77e5829695fca2abef2848f 361 PANTHER PTHR32182:SF0 1 356 1.5E-76 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YPO3414 347486e69c2ebdd22498eedb5f303f15 119 PIRSF PIRSF006287 1 119 3.5E-50 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YPO3414 347486e69c2ebdd22498eedb5f303f15 119 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 4.0E-63 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YPO3414 347486e69c2ebdd22498eedb5f303f15 119 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 1.8E-44 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YPO3414 347486e69c2ebdd22498eedb5f303f15 119 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.976 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 SUPERFAMILY SSF69742 1 158 7.59E-48 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 Gene3D G3DSA:3.40.50.720 184 358 2.9E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.1E-49 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.703 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 3.0E-23 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 SUPERFAMILY SSF51735 162 315 8.21E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 1.9E-158 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 PANTHER PTHR21089 272 359 1.5E-155 T 22-04-2016 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 PANTHER PTHR21089 18 256 1.5E-155 T 22-04-2016 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 SUPERFAMILY SSF69075 317 418 1.01E-27 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 PANTHER PTHR21089:SF3 272 359 1.5E-155 T 22-04-2016 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 PANTHER PTHR21089:SF3 18 256 1.5E-155 T 22-04-2016 YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 5.9E-49 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPO2016 7c741fb31bf31daf95a6f7eb507423fc 420 PIRSF PIRSF000445 1 420 4.2E-155 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO3597 485f868e3f9e91d268436ef3fbfb2f87 448 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 445 2.8E-154 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO3597 485f868e3f9e91d268436ef3fbfb2f87 448 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 446 1.2E-158 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO3597 485f868e3f9e91d268436ef3fbfb2f87 448 PANTHER PTHR35566 1 448 3.2E-217 T 22-04-2016 YPO3597 485f868e3f9e91d268436ef3fbfb2f87 448 PANTHER PTHR35566:SF1 1 448 3.2E-217 T 22-04-2016 YPO2292 86f257e49d4b5f0cd3990a3a746e63b5 264 Pfam PF07313 Protein of unknown function (DUF1460) 59 256 2.8E-78 T 22-04-2016 IPR010846 Protein of unknown function DUF1460 YPO2292 86f257e49d4b5f0cd3990a3a746e63b5 264 SUPERFAMILY SSF54001 34 264 3.27E-81 T 22-04-2016 YPO2292 86f257e49d4b5f0cd3990a3a746e63b5 264 Gene3D G3DSA:1.10.3670.10 28 138 4.2E-43 T 22-04-2016 YPO2292 86f257e49d4b5f0cd3990a3a746e63b5 264 Gene3D G3DSA:2.30.260.10 139 263 8.5E-34 T 22-04-2016 IPR023360 Putative xylanase-like C-terminal YPO0116 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.40.1160.10 115 300 2.2E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO0116 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.40.1160.10 13 60 2.2E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO0116 f544590c926fa0f10f68e391065b814d 811 SUPERFAMILY SSF53633 13 300 6.04E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO0116 f544590c926fa0f10f68e391065b814d 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 2.6E-21 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 YPO0116 f544590c926fa0f10f68e391065b814d 811 PIRSF PIRSF000727 13 811 9.0E-291 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 YPO0116 f544590c926fa0f10f68e391065b814d 811 Pfam PF00742 Homoserine dehydrogenase 609 804 1.6E-43 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YPO0116 f544590c926fa0f10f68e391065b814d 811 SUPERFAMILY SSF51735 458 631 9.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0116 f544590c926fa0f10f68e391065b814d 811 Pfam PF00696 Amino acid kinase family 13 285 1.2E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO0116 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.30.360.10 630 787 1.9E-52 T 22-04-2016 YPO0116 f544590c926fa0f10f68e391065b814d 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO0116 f544590c926fa0f10f68e391065b814d 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YPO0116 f544590c926fa0f10f68e391065b814d 811 Gene3D G3DSA:3.40.50.720 458 629 2.0E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0116 f544590c926fa0f10f68e391065b814d 811 SUPERFAMILY SSF55347 609 792 2.62E-47 T 22-04-2016 YPO0116 f544590c926fa0f10f68e391065b814d 811 PANTHER PTHR21499 387 811 2.8E-251 T 22-04-2016 YPO0116 f544590c926fa0f10f68e391065b814d 811 PANTHER PTHR21499:SF29 387 811 2.8E-251 T 22-04-2016 YPO0116 f544590c926fa0f10f68e391065b814d 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 6.8E-63 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO2072 195d09994056e56aa2dcb554630d7ae3 232 SUPERFAMILY SSF53067 110 219 4.14E-28 T 22-04-2016 YPO2072 195d09994056e56aa2dcb554630d7ae3 232 SUPERFAMILY SSF53067 5 107 3.88E-30 T 22-04-2016 YPO2072 195d09994056e56aa2dcb554630d7ae3 232 Gene3D G3DSA:3.30.420.40 4 134 2.6E-44 T 22-04-2016 YPO2072 195d09994056e56aa2dcb554630d7ae3 232 PANTHER PTHR11735:SF11 1 140 1.0E-62 T 22-04-2016 YPO2072 195d09994056e56aa2dcb554630d7ae3 232 PANTHER PTHR11735 1 140 1.0E-62 T 22-04-2016 YPO2072 195d09994056e56aa2dcb554630d7ae3 232 Pfam PF00814 Glycoprotease family 30 133 1.5E-28 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO2072 195d09994056e56aa2dcb554630d7ae3 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.7E-67 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 YPO2745 4f1e1259c5fc36eb7e64602e77fa4a14 98 PANTHER PTHR38769 1 98 2.8E-33 T 22-04-2016 YPO2745 4f1e1259c5fc36eb7e64602e77fa4a14 98 Pfam PF04175 Protein of unknown function (DUF406) 8 98 4.7E-40 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 YPO2745 4f1e1259c5fc36eb7e64602e77fa4a14 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 5 98 2.9E-39 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 YPO2745 4f1e1259c5fc36eb7e64602e77fa4a14 98 PANTHER PTHR38769:SF1 1 98 2.8E-33 T 22-04-2016 YPO2745 4f1e1259c5fc36eb7e64602e77fa4a14 98 Gene3D G3DSA:3.30.70.860 27 98 1.3E-33 T 22-04-2016 YPO3918 e04923a7ce3a5af69ca6ae0ec8165c8a 267 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 186 264 5.7E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YPO3918 e04923a7ce3a5af69ca6ae0ec8165c8a 267 Gene3D G3DSA:3.30.1150.10 153 265 8.6E-25 T 22-04-2016 YPO3918 e04923a7ce3a5af69ca6ae0ec8165c8a 267 PANTHER PTHR33446 12 266 8.1E-51 T 22-04-2016 YPO3918 e04923a7ce3a5af69ca6ae0ec8165c8a 267 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 186 265 1.9E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YPO3918 e04923a7ce3a5af69ca6ae0ec8165c8a 267 SUPERFAMILY SSF74653 165 265 1.96E-22 T 22-04-2016 YPO3918 e04923a7ce3a5af69ca6ae0ec8165c8a 267 PANTHER PTHR33446:SF2 12 266 8.1E-51 T 22-04-2016 YPO2744 45a8f95fc3f5450d6c8f43dbc00269fa 423 PANTHER PTHR35093:SF3 5 423 3.0E-287 T 22-04-2016 YPO2744 45a8f95fc3f5450d6c8f43dbc00269fa 423 PANTHER PTHR35093 5 423 3.0E-287 T 22-04-2016 YPO2744 45a8f95fc3f5450d6c8f43dbc00269fa 423 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 423 7.4E-138 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YPO2744 45a8f95fc3f5450d6c8f43dbc00269fa 423 SUPERFAMILY SSF56935 28 423 1.74E-104 T 22-04-2016 YPO2744 45a8f95fc3f5450d6c8f43dbc00269fa 423 Gene3D G3DSA:2.40.160.60 28 423 4.3E-131 T 22-04-2016 YPO0758 a97a2683fddcb6257875c925426ef170 331 Pfam PF13377 Periplasmic binding protein-like domain 166 326 3.0E-32 T 22-04-2016 YPO0758 a97a2683fddcb6257875c925426ef170 331 Gene3D G3DSA:1.10.260.40 1 59 2.4E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0758 a97a2683fddcb6257875c925426ef170 331 Gene3D G3DSA:3.40.50.2300 60 164 1.9E-15 T 22-04-2016 YPO0758 a97a2683fddcb6257875c925426ef170 331 SMART SM00354 1 67 4.4E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0758 a97a2683fddcb6257875c925426ef170 331 SUPERFAMILY SSF47413 2 54 4.69E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0758 a97a2683fddcb6257875c925426ef170 331 PANTHER PTHR30146:SF4 1 331 2.6E-108 T 22-04-2016 YPO0758 a97a2683fddcb6257875c925426ef170 331 PANTHER PTHR30146 1 331 2.6E-108 T 22-04-2016 YPO0758 a97a2683fddcb6257875c925426ef170 331 SUPERFAMILY SSF53822 58 327 7.85E-63 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0758 a97a2683fddcb6257875c925426ef170 331 Gene3D G3DSA:3.40.50.2300 165 326 1.1E-50 T 22-04-2016 YPO0758 a97a2683fddcb6257875c925426ef170 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 45 2.2E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2421 7e24b2e9d4ebc37cbf0e40106a3b62f8 327 PANTHER PTHR10859:SF49 4 327 2.7E-162 T 22-04-2016 YPO2421 7e24b2e9d4ebc37cbf0e40106a3b62f8 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 61.455 T 22-04-2016 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53|UniPathway: UPA00030|UniPathway: UPA00036 YPO2421 7e24b2e9d4ebc37cbf0e40106a3b62f8 327 Gene3D G3DSA:3.90.550.10 8 147 2.7E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO2421 7e24b2e9d4ebc37cbf0e40106a3b62f8 327 Pfam PF00535 Glycosyl transferase family 2 11 172 6.9E-31 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPO2421 7e24b2e9d4ebc37cbf0e40106a3b62f8 327 SUPERFAMILY SSF53448 8 244 1.06E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO2421 7e24b2e9d4ebc37cbf0e40106a3b62f8 327 PANTHER PTHR10859 4 327 2.7E-162 T 22-04-2016 YPO0887 e07d5f1abbf842371dc5c8b69fd6761d 404 Gene3D G3DSA:1.10.443.10 207 375 4.5E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO0887 e07d5f1abbf842371dc5c8b69fd6761d 404 SUPERFAMILY SSF56349 98 380 2.24E-66 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPO0887 e07d5f1abbf842371dc5c8b69fd6761d 404 PANTHER PTHR30629:SF3 1 393 6.0E-198 T 22-04-2016 YPO0887 e07d5f1abbf842371dc5c8b69fd6761d 404 Gene3D G3DSA:1.10.150.130 98 192 1.3E-15 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPO0887 e07d5f1abbf842371dc5c8b69fd6761d 404 Pfam PF00589 Phage integrase family 207 370 4.9E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO0887 e07d5f1abbf842371dc5c8b69fd6761d 404 Pfam PF13356 Domain of unknown function (DUF4102) 3 88 1.2E-17 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YPO0887 e07d5f1abbf842371dc5c8b69fd6761d 404 PANTHER PTHR30629 1 393 6.0E-198 T 22-04-2016 YPPCP1.06 7f1b23ebf64c79313a85a0a967adb1cf 138 PANTHER PTHR30540:SF7 1 138 9.4E-57 T 22-04-2016 YPPCP1.06 7f1b23ebf64c79313a85a0a967adb1cf 138 PANTHER PTHR30540 1 138 9.4E-57 T 22-04-2016 YPPCP1.06 7f1b23ebf64c79313a85a0a967adb1cf 138 Pfam PF02705 K+ potassium transporter 1 138 2.7E-49 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 3273 3705 1.8E-127 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 PANTHER PTHR12338 275 3705 0.0 T 22-04-2016 YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 Gene3D G3DSA:2.160.20.20 2993 3387 1.2E-44 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 SUPERFAMILY SSF103515 3394 3705 4.97E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 PANTHER PTHR12338:SF5 275 3705 0.0 T 22-04-2016 YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 SUPERFAMILY SSF51126 2930 3209 3.45E-46 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 SUPERFAMILY SSF51126 3237 3381 3.45E-46 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 Gene3D G3DSA:2.40.128.130 3388 3705 3.4E-86 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 SMART SM00869 3427 3694 1.1E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 SUPERFAMILY SSF51126 2314 2621 3.77E-7 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO1004 ad4d9374854f2deaf879a3bc0d426d52 3705 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 4.3E-9 T 22-04-2016 IPR024973 ESPR domain YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 SUPERFAMILY SSF52518 794 1164 8.99E-118 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Gene3D G3DSA:3.40.920.10 417 619 1.8E-74 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Gene3D G3DSA:3.30.70.20 671 782 2.1E-21 T 22-04-2016 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 SUPERFAMILY SSF54862 665 837 5.16E-22 T 22-04-2016 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 SUPERFAMILY SSF52518 2 254 2.35E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 SMART SM00890 622 679 2.2E-30 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 PANTHER PTHR32154 1 1177 0.0 T 22-04-2016 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 PANTHER PTHR32154:SF0 1 1177 0.0 T 22-04-2016 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Gene3D G3DSA:3.40.50.970 795 1168 2.9E-129 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 PIRSF PIRSF000159 1 1177 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 SUPERFAMILY SSF53323 417 668 2.62E-73 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Gene3D G3DSA:3.40.50.970 1 254 4.5E-111 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 6.4E-81 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 SUPERFAMILY SSF52922 255 410 4.14E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 608 6.0E-35 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Pfam PF12838 4Fe-4S dicluster domain 689 757 3.3E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 8.9E-9 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Gene3D G3DSA:4.10.780.10 628 668 8.5E-21 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Pfam PF10371 Domain of unknown function 627 678 1.1E-23 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Gene3D G3DSA:3.40.50.920 255 409 1.1E-58 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO2334 19d394ab0fd44a8c0b55b46525e5587e 1177 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 1.9E-14 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Gene3D G3DSA:1.10.460.10 170 217 9.3E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Gene3D G3DSA:1.10.460.10 480 602 9.3E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Gene3D G3DSA:3.40.50.140 1 169 1.3E-57 T 22-04-2016 IPR006171 Toprim domain YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 SUPERFAMILY SSF57783 751 813 2.55E-18 T 22-04-2016 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 SMART SM00436 139 227 1.0E-47 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 PANTHER PTHR11390:SF27 1 37 0.0 T 22-04-2016 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 PANTHER PTHR11390:SF27 73 782 0.0 T 22-04-2016 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 SMART SM00493 3 138 2.4E-34 T 22-04-2016 IPR006171 Toprim domain YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 SUPERFAMILY SSF56712 3 615 9.55E-202 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 766 799 3.3E-11 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 869 7.4E-24 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 SMART SM00437 278 533 1.2E-119 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 729 55.064 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Gene3D G3DSA:3.30.65.10 603 632 3.4E-11 T 22-04-2016 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Gene3D G3DSA:3.30.65.10 751 812 2.0E-25 T 22-04-2016 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Gene3D G3DSA:3.30.65.10 714 749 2.8E-11 T 22-04-2016 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Pfam PF01751 Toprim domain 5 148 1.4E-32 T 22-04-2016 IPR006171 Toprim domain YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 PANTHER PTHR11390 1 37 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 PANTHER PTHR11390 73 782 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 5.3E-255 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 750 1.0E-11 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 8.7E-6 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 SUPERFAMILY SSF57783 815 870 1.63E-22 T 22-04-2016 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 3.8E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Gene3D G3DSA:2.20.25.10 814 871 1.8E-31 T 22-04-2016 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Pfam PF01131 DNA topoisomerase 163 571 5.9E-126 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 SUPERFAMILY SSF57783 706 749 2.21E-7 T 22-04-2016 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Gene3D G3DSA:2.70.20.10 344 479 2.4E-35 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPO2218 ddedca1096bd3df0f67df19352e5b2f6 871 Gene3D G3DSA:2.70.20.10 219 339 3.3E-30 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 PRINTS PR01035 Tetracycline resistance protein signature 129 151 1.9E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.9E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 PRINTS PR01035 Tetracycline resistance protein signature 44 63 1.9E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 PRINTS PR01035 Tetracycline resistance protein signature 302 322 1.9E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 374 2.7E-74 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 Pfam PF07690 Major Facilitator Superfamily 10 351 4.8E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 SUPERFAMILY SSF103473 4 360 3.53E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2148 b3939d54662fe4b2c282c90230ba4050 400 Gene3D G3DSA:1.20.1250.20 5 184 5.2E-31 T 22-04-2016 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 PANTHER PTHR23502:SF19 4 375 1.9E-124 T 22-04-2016 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 Gene3D G3DSA:1.20.1250.20 197 361 2.1E-11 T 22-04-2016 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 PANTHER PTHR23502 4 375 1.9E-124 T 22-04-2016 YPO2148 b3939d54662fe4b2c282c90230ba4050 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPO1531 2ee6d356c7e3f14ef901f74d52621057 193 Pfam PF13523 Acetyltransferase (GNAT) domain 27 168 9.4E-45 T 22-04-2016 YPO1531 2ee6d356c7e3f14ef901f74d52621057 193 SMART SM01006 22 71 1.1E-9 T 22-04-2016 IPR019432 Siderophore biosynthesis protein, conserved domain YPO1531 2ee6d356c7e3f14ef901f74d52621057 193 PANTHER PTHR31438 2 193 5.2E-64 T 22-04-2016 YPO1531 2ee6d356c7e3f14ef901f74d52621057 193 SUPERFAMILY SSF55729 16 182 3.65E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1531 2ee6d356c7e3f14ef901f74d52621057 193 Gene3D G3DSA:3.40.630.30 16 184 4.4E-51 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2312 7a66e5cbb92164c6b823995949f13dc2 874 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 610 690 2.1E-26 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPO2312 7a66e5cbb92164c6b823995949f13dc2 874 PANTHER PTHR11219 99 871 0.0 T 22-04-2016 YPO2312 7a66e5cbb92164c6b823995949f13dc2 874 PANTHER PTHR11219 12 78 0.0 T 22-04-2016 YPO2312 7a66e5cbb92164c6b823995949f13dc2 874 PANTHER PTHR11219:SF45 99 871 0.0 T 22-04-2016 YPO2312 7a66e5cbb92164c6b823995949f13dc2 874 PANTHER PTHR11219:SF45 12 78 0.0 T 22-04-2016 YPO2312 7a66e5cbb92164c6b823995949f13dc2 874 SUPERFAMILY SSF81298 674 864 3.66E-71 T 22-04-2016 YPO2312 7a66e5cbb92164c6b823995949f13dc2 874 Pfam PF03497 Anthrax toxin LF subunit 697 799 3.9E-19 T 22-04-2016 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 YPO1867 0ba10e4106836df4e96c866b4617c37b 182 PANTHER PTHR14269 2 179 3.3E-106 T 22-04-2016 YPO1867 0ba10e4106836df4e96c866b4617c37b 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 5.9E-60 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPO1867 0ba10e4106836df4e96c866b4617c37b 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 32.649 T 22-04-2016 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPO1867 0ba10e4106836df4e96c866b4617c37b 182 PANTHER PTHR14269:SF13 2 179 3.3E-106 T 22-04-2016 YPO1867 0ba10e4106836df4e96c866b4617c37b 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.4E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YPO1867 0ba10e4106836df4e96c866b4617c37b 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YPO1867 0ba10e4106836df4e96c866b4617c37b 182 PIRSF PIRSF000847 1 180 9.9E-44 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 SUPERFAMILY SSF46894 141 239 1.87E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 Pfam PF00072 Response regulator receiver domain 5 115 2.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 Gene3D G3DSA:1.10.10.10 143 241 2.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 SMART SM00448 3 115 1.6E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 PANTHER PTHR26402:SF292 3 243 7.2E-70 T 22-04-2016 YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 238 1.9E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 SMART SM00862 162 238 1.8E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 Gene3D G3DSA:3.40.50.2300 2 124 1.1E-36 T 22-04-2016 YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 SUPERFAMILY SSF52172 2 124 1.57E-35 T 22-04-2016 IPR011006 CheY-like superfamily YPO3958 c5dbb1eff82fe1c9ac746f4cb50045c3 245 PANTHER PTHR26402 3 243 7.2E-70 T 22-04-2016 YPO1767 fbbe3e01a357cb45266bde8fc5d7f87e 268 Gene3D G3DSA:3.20.20.60 4 252 2.4E-80 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO1767 fbbe3e01a357cb45266bde8fc5d7f87e 268 PANTHER PTHR30502:SF0 6 265 2.5E-106 T 22-04-2016 YPO1767 fbbe3e01a357cb45266bde8fc5d7f87e 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 4.3E-61 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 YPO1767 fbbe3e01a357cb45266bde8fc5d7f87e 268 SUPERFAMILY SSF51621 2 253 2.16E-82 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO1767 fbbe3e01a357cb45266bde8fc5d7f87e 268 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 253 5.3E-137 T 22-04-2016 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52|UniPathway: UPA00208 YPO1767 fbbe3e01a357cb45266bde8fc5d7f87e 268 PANTHER PTHR30502 6 265 2.5E-106 T 22-04-2016 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 3.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 3.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 3.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 3.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF55874 336 505 7.2E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:3.30.450.20 143 267 2.3E-21 T 22-04-2016 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 PANTHER PTHR24423 4 95 0.0 T 22-04-2016 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 PANTHER PTHR24423 153 677 0.0 T 22-04-2016 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 PANTHER PTHR24423:SF476 4 95 0.0 T 22-04-2016 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 PANTHER PTHR24423:SF476 153 677 0.0 T 22-04-2016 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF01627 Hpt domain 686 769 8.3E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF47384 269 347 9.42E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:1.10.287.130 274 332 3.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00388 282 347 5.6E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00073 675 772 1.0E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:1.20.120.160 676 775 6.2E-36 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 8.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 1.0E-15 T 22-04-2016 IPR000014 PAS domain YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF52172 525 648 3.42E-30 T 22-04-2016 IPR011006 CheY-like superfamily YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 PIRSF PIRSF003182 1 778 0.0 T 22-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF55785 143 267 1.92E-21 T 22-04-2016 IPR000014 PAS domain YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:3.40.50.2300 525 652 4.8E-33 T 22-04-2016 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SUPERFAMILY SSF47226 661 773 7.98E-31 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF00989 PAS fold 157 266 2.5E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 1.6E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00448 525 638 3.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00387 394 507 3.1E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Pfam PF00072 Response regulator receiver domain 527 638 8.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 SMART SM00091 155 221 4.9E-8 T 22-04-2016 IPR000014 PAS domain YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:3.30.565.10 333 506 2.2E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3555 9fdec9ada19f03f6bff0e2f283122f02 778 Gene3D G3DSA:1.10.287.970 1 89 2.0E-39 T 22-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 Pfam PF01782 RimM N-terminal domain 16 96 1.2E-25 T 22-04-2016 IPR002676 RimM protein GO:0006364 YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 4.8E-60 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 PANTHER PTHR33692:SF1 9 180 2.6E-66 T 22-04-2016 YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 SUPERFAMILY SSF50346 106 182 2.35E-19 T 22-04-2016 IPR011033 PRC-barrel-like YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 Gene3D G3DSA:2.40.30.60 8 100 2.3E-35 T 22-04-2016 IPR002676 RimM protein GO:0006364 YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 PANTHER PTHR33692 9 180 2.6E-66 T 22-04-2016 YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.289 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 Gene3D G3DSA:2.30.30.240 106 182 1.5E-29 T 22-04-2016 YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 SUPERFAMILY SSF50447 13 99 8.83E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO3294 d72e92d99b7a164bdb31609c01bc863a 182 Pfam PF05239 PRC-barrel domain 103 177 3.8E-9 T 22-04-2016 IPR027275 PRC-barrel domain YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 Gene3D G3DSA:1.10.287.130 390 458 6.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 SMART SM00448 694 809 2.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 510 614 4.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 PANTHER PTHR24423 376 849 3.0E-182 T 22-04-2016 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 PANTHER PTHR24423 8 18 3.0E-182 T 22-04-2016 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 Gene3D G3DSA:1.20.120.160 801 913 1.1E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 Gene3D G3DSA:3.40.50.2300 693 800 2.9E-35 T 22-04-2016 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 Pfam PF00072 Response regulator receiver domain 696 809 2.2E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 SUPERFAMILY SSF47384 383 464 2.35E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 Pfam PF01627 Hpt domain 848 914 4.4E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 Pfam PF00512 His Kinase A (phospho-acceptor) domain 398 462 9.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 SUPERFAMILY SSF52172 693 814 6.26E-33 T 22-04-2016 IPR011006 CheY-like superfamily YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 SUPERFAMILY SSF55874 451 614 1.05E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 SUPERFAMILY SSF47226 792 901 4.71E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 SMART SM00387 509 616 1.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 SMART SM00388 397 462 1.0E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 Gene3D G3DSA:3.30.565.10 462 617 8.5E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 PANTHER PTHR24423:SF486 376 849 3.0E-182 T 22-04-2016 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 PANTHER PTHR24423:SF486 8 18 3.0E-182 T 22-04-2016 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 613 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 594 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0256 77cb8f98514575aa76e3f9de3b4645f0 939 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 1.5E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0364 7eff6aec5550c84374a5e47480725be8 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 284 1.7E-93 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YPO0364 7eff6aec5550c84374a5e47480725be8 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 48.699 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YPO0364 7eff6aec5550c84374a5e47480725be8 293 Pfam PF02666 Phosphatidylserine decarboxylase 63 284 8.7E-60 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YPO0364 7eff6aec5550c84374a5e47480725be8 293 PANTHER PTHR10067 1 293 7.2E-116 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YPO3041 9e86a45d9e947a3f940d44d702785045 209 Pfam PF00072 Response regulator receiver domain 7 118 3.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3041 9e86a45d9e947a3f940d44d702785045 209 SMART SM00421 146 203 1.3E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO3041 9e86a45d9e947a3f940d44d702785045 209 PANTHER PTHR26402:SF458 5 209 6.2E-104 T 22-04-2016 YPO3041 9e86a45d9e947a3f940d44d702785045 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO3041 9e86a45d9e947a3f940d44d702785045 209 Gene3D G3DSA:3.40.50.2300 3 145 6.4E-40 T 22-04-2016 YPO3041 9e86a45d9e947a3f940d44d702785045 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.9E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO3041 9e86a45d9e947a3f940d44d702785045 209 SUPERFAMILY SSF46894 129 207 4.08E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO3041 9e86a45d9e947a3f940d44d702785045 209 SMART SM00448 5 118 4.0E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3041 9e86a45d9e947a3f940d44d702785045 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO3041 9e86a45d9e947a3f940d44d702785045 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO3041 9e86a45d9e947a3f940d44d702785045 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO3041 9e86a45d9e947a3f940d44d702785045 209 SUPERFAMILY SSF52172 4 136 1.99E-35 T 22-04-2016 IPR011006 CheY-like superfamily YPO3041 9e86a45d9e947a3f940d44d702785045 209 Gene3D G3DSA:1.10.10.10 146 206 9.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3041 9e86a45d9e947a3f940d44d702785045 209 PANTHER PTHR26402 5 209 6.2E-104 T 22-04-2016 YPO1074 584ab34b47768699a051cd067dcedfb9 188 PANTHER PTHR23133 6 185 4.0E-73 T 22-04-2016 YPO1074 584ab34b47768699a051cd067dcedfb9 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 153 2.9E-37 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPO1074 584ab34b47768699a051cd067dcedfb9 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 154 6.4E-40 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 YPO1074 584ab34b47768699a051cd067dcedfb9 188 Gene3D G3DSA:3.40.50.1000 3 183 1.3E-61 T 22-04-2016 IPR023214 HAD-like domain YPO1074 584ab34b47768699a051cd067dcedfb9 188 SUPERFAMILY SSF56784 3 184 4.61E-53 T 22-04-2016 IPR023214 HAD-like domain YPO1074 584ab34b47768699a051cd067dcedfb9 188 Pfam PF13242 HAD-hyrolase-like 109 179 3.6E-12 T 22-04-2016 YPO1074 584ab34b47768699a051cd067dcedfb9 188 PIRSF PIRSF004682 1 188 4.0E-67 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YPO1074 584ab34b47768699a051cd067dcedfb9 188 PANTHER PTHR23133:SF3 6 185 4.0E-73 T 22-04-2016 YPO1074 584ab34b47768699a051cd067dcedfb9 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 2.2E-93 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.667 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 Gene3D G3DSA:3.40.50.300 3 208 6.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 Gene3D G3DSA:2.40.30.10 300 393 3.9E-46 T 22-04-2016 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 Gene3D G3DSA:2.40.30.10 209 298 5.6E-37 T 22-04-2016 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 PANTHER PTHR23115:SF151 1 393 0.0 T 22-04-2016 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 PANTHER PTHR23115 1 393 0.0 T 22-04-2016 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.3E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 SUPERFAMILY SSF50465 298 393 9.21E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 SUPERFAMILY SSF50447 205 301 4.71E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 2.7E-236 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-57 T 22-04-2016 YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 SUPERFAMILY SSF52540 6 219 6.27E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0203 7674c1ea56bdb448966b5caedb8b0691 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.2E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPO0286 5729baa30a2e6b3d348a822d4c6bab2c 437 PANTHER PTHR13932 1 434 1.4E-200 T 22-04-2016 YPO0286 5729baa30a2e6b3d348a822d4c6bab2c 437 Pfam PF04055 Radical SAM superfamily 59 228 4.8E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO0286 5729baa30a2e6b3d348a822d4c6bab2c 437 PANTHER PTHR13932:SF5 1 434 1.4E-200 T 22-04-2016 YPO0286 5729baa30a2e6b3d348a822d4c6bab2c 437 SMART SM00729 53 275 5.4E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPO0286 5729baa30a2e6b3d348a822d4c6bab2c 437 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 16 427 1.4E-175 T 22-04-2016 IPR026332 Putative heme utilization radical SAM enzyme HutW YPO0286 5729baa30a2e6b3d348a822d4c6bab2c 437 SUPERFAMILY SSF102114 5 423 1.57E-90 T 22-04-2016 YPO0286 5729baa30a2e6b3d348a822d4c6bab2c 437 Gene3D G3DSA:3.80.30.20 56 256 2.7E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPO1011 dcd237fdaaa6652770b3ac66f5f9d12c 690 Gene3D G3DSA:2.170.130.10 28 159 2.4E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO1011 dcd237fdaaa6652770b3ac66f5f9d12c 690 Gene3D G3DSA:2.40.170.20 160 690 1.4E-87 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1011 dcd237fdaaa6652770b3ac66f5f9d12c 690 PANTHER PTHR32552 1 690 1.9E-287 T 22-04-2016 YPO1011 dcd237fdaaa6652770b3ac66f5f9d12c 690 PANTHER PTHR32552:SF33 1 690 1.9E-287 T 22-04-2016 YPO1011 dcd237fdaaa6652770b3ac66f5f9d12c 690 SUPERFAMILY SSF56935 31 690 4.27E-120 T 22-04-2016 YPO1011 dcd237fdaaa6652770b3ac66f5f9d12c 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 150 6.6E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO1011 dcd237fdaaa6652770b3ac66f5f9d12c 690 Pfam PF00593 TonB dependent receptor 442 688 1.3E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1813 9bbc8b7648f5032f70d159d498b438b2 331 Gene3D G3DSA:3.40.50.2300 148 270 1.0E-24 T 22-04-2016 YPO1813 9bbc8b7648f5032f70d159d498b438b2 331 Gene3D G3DSA:3.40.50.2300 28 147 1.2E-21 T 22-04-2016 YPO1813 9bbc8b7648f5032f70d159d498b438b2 331 Pfam PF13407 Periplasmic binding protein domain 29 284 4.2E-45 T 22-04-2016 IPR025997 Periplasmic binding protein YPO1813 9bbc8b7648f5032f70d159d498b438b2 331 PANTHER PTHR32196 1 306 4.0E-161 T 22-04-2016 YPO1813 9bbc8b7648f5032f70d159d498b438b2 331 SUPERFAMILY SSF53822 26 331 3.3E-60 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO1813 9bbc8b7648f5032f70d159d498b438b2 331 PANTHER PTHR32196:SF36 1 306 4.0E-161 T 22-04-2016 YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 PANTHER PTHR21000:SF9 298 625 0.0 T 22-04-2016 YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 PANTHER PTHR21000:SF9 3 274 0.0 T 22-04-2016 YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 SUPERFAMILY SSF143975 3 440 1.44E-140 T 22-04-2016 YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 527 538 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 623 0.0 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 Pfam PF00920 Dehydratase family 69 620 2.4E-156 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 SUPERFAMILY SSF52016 441 622 4.0E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 PANTHER PTHR21000 298 625 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 PANTHER PTHR21000 3 274 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO2533 ce911c47e338a298c7e18453ddbc3a3a 625 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3647 9854525a5319f285d57a8b3dd7177372 275 Gene3D G3DSA:3.60.15.10 37 247 4.2E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO3647 9854525a5319f285d57a8b3dd7177372 275 Pfam PF00753 Metallo-beta-lactamase superfamily 46 208 1.3E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO3647 9854525a5319f285d57a8b3dd7177372 275 PANTHER PTHR23200:SF40 11 273 2.0E-71 T 22-04-2016 YPO3647 9854525a5319f285d57a8b3dd7177372 275 SUPERFAMILY SSF56281 36 248 2.75E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO3647 9854525a5319f285d57a8b3dd7177372 275 PANTHER PTHR23200 11 273 2.0E-71 T 22-04-2016 YPO3647 9854525a5319f285d57a8b3dd7177372 275 SMART SM00849 44 244 0.0053 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO2029 007a9f275da6fbac3250f5fcbf7fc0f5 360 Gene3D G3DSA:3.40.190.10 1 136 4.9E-22 T 22-04-2016 YPO2029 007a9f275da6fbac3250f5fcbf7fc0f5 360 Gene3D G3DSA:3.40.190.10 298 345 4.9E-22 T 22-04-2016 YPO2029 007a9f275da6fbac3250f5fcbf7fc0f5 360 SUPERFAMILY SSF53850 34 338 1.48E-41 T 22-04-2016 YPO2029 007a9f275da6fbac3250f5fcbf7fc0f5 360 PANTHER PTHR30006:SF10 5 197 2.3E-136 T 22-04-2016 YPO2029 007a9f275da6fbac3250f5fcbf7fc0f5 360 PANTHER PTHR30006:SF10 215 355 2.3E-136 T 22-04-2016 YPO2029 007a9f275da6fbac3250f5fcbf7fc0f5 360 Pfam PF13416 Bacterial extracellular solute-binding protein 54 331 9.3E-29 T 22-04-2016 YPO2029 007a9f275da6fbac3250f5fcbf7fc0f5 360 PANTHER PTHR30006 5 197 2.3E-136 T 22-04-2016 YPO2029 007a9f275da6fbac3250f5fcbf7fc0f5 360 PANTHER PTHR30006 215 355 2.3E-136 T 22-04-2016 YPO2029 007a9f275da6fbac3250f5fcbf7fc0f5 360 Gene3D G3DSA:3.40.190.10 141 297 2.9E-17 T 22-04-2016 YPO1127 7b9a535719b03cc0b8e0b085c2314add 353 PANTHER PTHR30573 1 352 2.0E-172 T 22-04-2016 YPO1127 7b9a535719b03cc0b8e0b085c2314add 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 71.082 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YPO1127 7b9a535719b03cc0b8e0b085c2314add 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 5.4E-121 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YPO1127 7b9a535719b03cc0b8e0b085c2314add 353 SUPERFAMILY SSF142754 29 341 1.96E-106 T 22-04-2016 YPO1127 7b9a535719b03cc0b8e0b085c2314add 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 4.2E-102 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YPO2491 6a887b09f683c844656f3ee2ad172dbe 562 Gene3D G3DSA:3.10.20.310 73 153 5.8E-22 T 22-04-2016 YPO2491 6a887b09f683c844656f3ee2ad172dbe 562 PANTHER PTHR34597 2 562 4.2E-291 T 22-04-2016 YPO2491 6a887b09f683c844656f3ee2ad172dbe 562 Pfam PF08479 POTRA domain, ShlB-type 77 153 2.9E-25 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPO2491 6a887b09f683c844656f3ee2ad172dbe 562 PIRSF PIRSF029745 3 562 2.9E-163 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPO2491 6a887b09f683c844656f3ee2ad172dbe 562 PANTHER PTHR34597:SF2 2 562 4.2E-291 T 22-04-2016 YPO2491 6a887b09f683c844656f3ee2ad172dbe 562 Gene3D G3DSA:2.40.160.50 184 562 2.5E-125 T 22-04-2016 YPO2491 6a887b09f683c844656f3ee2ad172dbe 562 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 165 506 1.6E-25 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 445 2.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 Gene3D G3DSA:1.10.287.130 218 287 3.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 PANTHER PTHR24423:SF564 166 449 3.0E-131 T 22-04-2016 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 PANTHER PTHR24423:SF564 57 80 3.0E-131 T 22-04-2016 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 SUPERFAMILY SSF55874 281 446 8.64E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 SUPERFAMILY SSF47384 212 291 1.49E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 290 4.6E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 Gene3D G3DSA:3.30.565.10 297 446 3.0E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 Pfam PF00672 HAMP domain 159 224 1.4E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 PANTHER PTHR24423 166 449 3.0E-131 T 22-04-2016 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 PANTHER PTHR24423 57 80 3.0E-131 T 22-04-2016 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 SMART SM00387 338 448 1.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 SUPERFAMILY SSF158472 173 225 5.23E-8 T 22-04-2016 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 7.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 7.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 7.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 SMART SM00304 172 227 3.7E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO2997 6842286517ddc6f4f71c1b143d6645eb 449 SMART SM00388 228 291 6.8E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3191 a3edcc49e3e08b50ac38c673e0da7702 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.8E-93 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO3191 a3edcc49e3e08b50ac38c673e0da7702 374 SUPERFAMILY SSF51713 2 364 2.88E-163 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO3191 a3edcc49e3e08b50ac38c673e0da7702 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 3.3E-190 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO3191 a3edcc49e3e08b50ac38c673e0da7702 374 Gene3D G3DSA:3.20.20.105 1 366 6.1E-170 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO3191 a3edcc49e3e08b50ac38c673e0da7702 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.321 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO3191 a3edcc49e3e08b50ac38c673e0da7702 374 PANTHER PTHR21148:SF26 1 364 3.6E-185 T 22-04-2016 YPO3191 a3edcc49e3e08b50ac38c673e0da7702 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 1.4E-179 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YPO3191 a3edcc49e3e08b50ac38c673e0da7702 374 PANTHER PTHR21148 1 364 3.6E-185 T 22-04-2016 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 Pfam PF02911 Formyl transferase, C-terminal domain 203 283 1.4E-16 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 SUPERFAMILY SSF53328 1 202 1.28E-55 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 Gene3D G3DSA:3.90.25.10 570 641 3.1E-43 T 22-04-2016 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 3.8E-42 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 PANTHER PTHR10366 317 659 2.9E-189 T 22-04-2016 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.645 T 22-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 Gene3D G3DSA:3.40.50.720 306 553 2.9E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 Gene3D G3DSA:3.40.50.170 1 200 1.3E-51 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 SUPERFAMILY SSF50486 205 304 3.14E-23 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 PANTHER PTHR10366:SF253 317 659 2.9E-189 T 22-04-2016 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 PIRSF PIRSF036506 1 660 0.0 T 22-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 Gene3D G3DSA:3.10.25.10 204 305 4.4E-21 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 SUPERFAMILY SSF51735 317 651 4.32E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2420 0b11631209aaa1977cd85fd0c33cd387 667 Pfam PF00551 Formyl transferase 25 173 4.0E-24 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2462 836574fa37abd3e91d928173432b81e1 184 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 184 1.8E-70 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 YPO2462 836574fa37abd3e91d928173432b81e1 184 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 184 1.9E-64 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 YPO0346 b5f245c3a83c4b86c7a6bccf48cdbe34 119 Pfam PF03091 CutA1 divalent ion tolerance protein 19 116 4.3E-34 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 YPO0346 b5f245c3a83c4b86c7a6bccf48cdbe34 119 PANTHER PTHR23419 1 119 9.0E-48 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 YPO0346 b5f245c3a83c4b86c7a6bccf48cdbe34 119 SUPERFAMILY SSF54913 15 117 6.67E-36 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO0346 b5f245c3a83c4b86c7a6bccf48cdbe34 119 Gene3D G3DSA:3.30.70.830 12 117 4.1E-40 T 22-04-2016 YPO0346 b5f245c3a83c4b86c7a6bccf48cdbe34 119 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 1 119 42.481 T 22-04-2016 IPR023700 Divalent cation tolerance protein CutA, bacteria GO:0005507|GO:0005737 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 SUPERFAMILY SSF51395 11 319 6.04E-88 T 22-04-2016 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 Gene3D G3DSA:1.10.1200.80 253 320 2.1E-16 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 Gene3D G3DSA:3.20.20.70 8 244 2.4E-81 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 PANTHER PTHR11082:SF25 1 318 5.0E-150 T 22-04-2016 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 PANTHER PTHR11082 1 318 5.0E-150 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 3.7E-114 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 PIRSF PIRSF006621 1 321 5.1E-99 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 48.789 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 YPO3655 9b2817c09b05e6dcf24a42ce782f84b7 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 3.4E-134 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 YPO0083 d67835e9290ffd49bd023da7c8602a13 245 Gene3D G3DSA:3.40.50.10320 6 243 8.0E-48 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain YPO0083 d67835e9290ffd49bd023da7c8602a13 245 PANTHER PTHR12993:SF11 1 228 2.1E-59 T 22-04-2016 YPO0083 d67835e9290ffd49bd023da7c8602a13 245 Pfam PF02585 GlcNAc-PI de-N-acetylase 10 138 3.8E-22 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPO0083 d67835e9290ffd49bd023da7c8602a13 245 SUPERFAMILY SSF102588 6 244 1.01E-50 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain YPO0083 d67835e9290ffd49bd023da7c8602a13 245 PANTHER PTHR12993 1 228 2.1E-59 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPO0285 a414bf03f1df8f4822ec5e07d3a40ffe 181 PIRSF PIRSF030840 1 174 9.3E-91 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like YPO0285 a414bf03f1df8f4822ec5e07d3a40ffe 181 Pfam PF06228 Haem utilisation ChuX/HutX 34 168 1.9E-33 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like YPO0285 a414bf03f1df8f4822ec5e07d3a40ffe 181 SUPERFAMILY SSF144064 5 172 7.32E-53 T 22-04-2016 YPO0285 a414bf03f1df8f4822ec5e07d3a40ffe 181 Gene3D G3DSA:3.40.1570.10 4 174 2.5E-72 T 22-04-2016 YPO0285 a414bf03f1df8f4822ec5e07d3a40ffe 181 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 18 168 8.6E-65 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like YPO2522 fe21d4a6f7bb0455fd3bb4130ad183da 319 SUPERFAMILY SSF52418 79 316 1.46E-44 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPO2522 fe21d4a6f7bb0455fd3bb4130ad183da 319 Gene3D G3DSA:1.20.970.10 7 69 4.8E-18 T 22-04-2016 YPO2522 fe21d4a6f7bb0455fd3bb4130ad183da 319 Gene3D G3DSA:3.40.1030.10 79 316 3.7E-37 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPO2522 fe21d4a6f7bb0455fd3bb4130ad183da 319 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 68 2.0E-9 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPO2522 fe21d4a6f7bb0455fd3bb4130ad183da 319 SUPERFAMILY SSF47648 7 70 1.31E-13 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YPO2522 fe21d4a6f7bb0455fd3bb4130ad183da 319 Pfam PF00591 Glycosyl transferase family, a/b domain 94 316 1.6E-5 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 Gene3D G3DSA:3.40.50.720 6 202 1.3E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 PIRSF PIRSF500136 1 420 3.7E-147 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 76.304 T 22-04-2016 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335|UniPathway: UPA00566 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 Gene3D G3DSA:3.40.50.720 237 419 1.0E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 SUPERFAMILY SSF51735 5 198 1.35E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 6.5E-26 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 187 1.2E-57 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 SUPERFAMILY SSF52413 311 419 6.02E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 PIRSF PIRSF000124 4 418 4.1E-73 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 2.1E-19 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 Gene3D G3DSA:1.20.5.100 206 234 9.7E-6 T 22-04-2016 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 2.3E-118 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 PANTHER PTHR11374:SF4 1 420 5.9E-200 T 22-04-2016 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 PANTHER PTHR11374 1 420 5.9E-200 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 SMART SM00984 324 420 2.9E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPO3863 0d1f7ab87ca2610d496b7bf0087ab552 420 SUPERFAMILY SSF48179 206 298 1.62E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO2859 e423a1b3da52f31559faafe3b1c96ec4 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 6.9E-93 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 YPO2859 e423a1b3da52f31559faafe3b1c96ec4 266 SUPERFAMILY SSF53613 5 266 1.06E-77 T 22-04-2016 IPR029056 Ribokinase-like YPO2859 e423a1b3da52f31559faafe3b1c96ec4 266 PANTHER PTHR20858 1 266 2.9E-118 T 22-04-2016 YPO2859 e423a1b3da52f31559faafe3b1c96ec4 266 PANTHER PTHR20858:SF17 1 266 2.9E-118 T 22-04-2016 YPO2859 e423a1b3da52f31559faafe3b1c96ec4 266 Gene3D G3DSA:3.40.1190.20 6 263 8.4E-98 T 22-04-2016 IPR029056 Ribokinase-like YPO2859 e423a1b3da52f31559faafe3b1c96ec4 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 262 1.0E-100 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 2.1E-148 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 Gene3D G3DSA:3.60.90.10 33 186 3.4E-46 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 SUPERFAMILY SSF56276 112 173 9.02E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 SUPERFAMILY SSF56276 43 84 9.02E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 PIRSF PIRSF001356 1 263 1.4E-157 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 PANTHER PTHR33866 15 84 2.4E-175 T 22-04-2016 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 177.52 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 4.5E-29 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 PANTHER PTHR33866:SF1 112 263 2.4E-175 T 22-04-2016 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 PANTHER PTHR33866:SF1 15 84 2.4E-175 T 22-04-2016 YPO3412 58bb3b157f2de78720ef68a65a0c67d1 264 PANTHER PTHR33866 112 263 2.4E-175 T 22-04-2016 YPO0701 56074dc2ea0497464ca73ce28602d847 337 Gene3D G3DSA:3.40.50.1980 162 324 6.8E-26 T 22-04-2016 YPO0701 56074dc2ea0497464ca73ce28602d847 337 PANTHER PTHR30532 3 335 4.3E-189 T 22-04-2016 YPO0701 56074dc2ea0497464ca73ce28602d847 337 Pfam PF01497 Periplasmic binding protein 53 299 1.1E-21 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPO0701 56074dc2ea0497464ca73ce28602d847 337 SUPERFAMILY SSF53807 30 311 7.46E-44 T 22-04-2016 YPO0701 56074dc2ea0497464ca73ce28602d847 337 Gene3D G3DSA:3.40.50.1980 33 161 9.1E-24 T 22-04-2016 YPO0701 56074dc2ea0497464ca73ce28602d847 337 PANTHER PTHR30532:SF2 3 335 4.3E-189 T 22-04-2016 YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 Gene3D G3DSA:3.40.50.1000 88 213 3.9E-32 T 22-04-2016 IPR023214 HAD-like domain YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 Gene3D G3DSA:3.40.50.1000 3 19 3.9E-32 T 22-04-2016 IPR023214 HAD-like domain YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 SUPERFAMILY SSF56784 4 212 1.08E-46 T 22-04-2016 IPR023214 HAD-like domain YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 183 6.5E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 1.7E-25 T 22-04-2016 IPR023214 HAD-like domain YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 PANTHER PTHR18901 2 222 1.8E-66 T 22-04-2016 YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 PANTHER PTHR18901:SF2 2 222 1.8E-66 T 22-04-2016 YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO4108 ff54d9bccfb310544db6e3a9ee781578 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO1747 a50ed98301dbf0fb74fe88fb331921ae 251 PANTHER PTHR30616 23 191 1.0E-60 T 22-04-2016 YPO1747 a50ed98301dbf0fb74fe88fb331921ae 251 Gene3D G3DSA:3.60.140.10 40 193 1.2E-50 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPO1747 a50ed98301dbf0fb74fe88fb331921ae 251 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 38 193 5.7E-42 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPO1747 a50ed98301dbf0fb74fe88fb331921ae 251 SUPERFAMILY SSF64438 20 193 1.72E-47 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPO1747 a50ed98301dbf0fb74fe88fb331921ae 251 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 192 1.4E-45 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPO1946 f9a36730617740831c2622055212fa46 237 Pfam PF00005 ABC transporter 33 178 2.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1946 f9a36730617740831c2622055212fa46 237 PANTHER PTHR24220 19 226 2.5E-115 T 22-04-2016 YPO1946 f9a36730617740831c2622055212fa46 237 Gene3D G3DSA:3.40.50.300 16 230 7.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1946 f9a36730617740831c2622055212fa46 237 PANTHER PTHR24220:SF433 19 226 2.5E-115 T 22-04-2016 YPO1946 f9a36730617740831c2622055212fa46 237 SUPERFAMILY SSF52540 17 233 2.32E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1946 f9a36730617740831c2622055212fa46 237 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1946 f9a36730617740831c2622055212fa46 237 SMART SM00382 42 226 3.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 Pfam PF00175 Oxidoreductase NAD-binding domain 205 307 3.4E-23 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 152 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 293 301 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 204 223 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 130 142 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 189 198 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 PRINTS PR00410 Phenol hydroxylase reductase family signature 229 238 1.1E-24 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 SUPERFAMILY SSF52343 198 327 1.03E-33 T 22-04-2016 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 SUPERFAMILY SSF54292 2 96 1.21E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 SUPERFAMILY SSF63380 100 195 1.58E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 PANTHER PTHR19370:SF68 32 326 1.0E-110 T 22-04-2016 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 PANTHER PTHR19370 32 326 1.0E-110 T 22-04-2016 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 Gene3D G3DSA:3.10.20.30 2 99 2.4E-27 T 22-04-2016 IPR012675 Beta-grasp domain YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 79 2.3E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 Gene3D G3DSA:3.40.50.80 199 327 1.9E-34 T 22-04-2016 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 Gene3D G3DSA:2.40.30.10 100 195 3.9E-24 T 22-04-2016 YPO3116 8a227cb5abb67e0eed1bcdebe52f77c4 329 Pfam PF00970 Oxidoreductase FAD-binding domain 103 194 1.8E-20 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPO2368 003f03157bc3dfe386f38ce71e55fcbb 286 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 1 286 53.66 T 22-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO2368 003f03157bc3dfe386f38ce71e55fcbb 286 SUPERFAMILY SSF53613 1 279 2.03E-76 T 22-04-2016 IPR029056 Ribokinase-like YPO2368 003f03157bc3dfe386f38ce71e55fcbb 286 Pfam PF08543 Phosphomethylpyrimidine kinase 90 263 1.3E-16 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 YPO2368 003f03157bc3dfe386f38ce71e55fcbb 286 PANTHER PTHR10534 1 286 1.4E-146 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO2368 003f03157bc3dfe386f38ce71e55fcbb 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 1.3E-128 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YPO2368 003f03157bc3dfe386f38ce71e55fcbb 286 Gene3D G3DSA:3.40.1190.20 1 284 1.5E-89 T 22-04-2016 IPR029056 Ribokinase-like YPO2368 003f03157bc3dfe386f38ce71e55fcbb 286 PANTHER PTHR10534:SF0 1 286 1.4E-146 T 22-04-2016 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00473 Galactokinase signature 27 45 3.1E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00473 Galactokinase signature 112 130 3.1E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00473 Galactokinase signature 92 103 3.1E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00473 Galactokinase signature 263 277 3.1E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PIRSF PIRSF000530 1 383 3.6E-118 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 Hamap MF_00246 Galactokinase [galK]. 25 382 42.547 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 TIGRFAM TIGR00131 gal_kin: galactokinase 5 383 2.6E-152 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00959 Mevalonate kinase family signature 328 345 3.8E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00959 Mevalonate kinase family signature 119 141 3.8E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00959 Mevalonate kinase family signature 162 181 3.8E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PRINTS PR00959 Mevalonate kinase family signature 25 49 3.8E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PANTHER PTHR10457:SF6 2 381 8.5E-150 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 Gene3D G3DSA:3.30.70.890 208 381 7.1E-58 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 Pfam PF10509 Galactokinase galactose-binding signature 11 57 6.4E-22 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 Pfam PF08544 GHMP kinases C terminal 279 361 5.7E-10 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 Pfam PF00288 GHMP kinases N terminal domain 115 181 1.9E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 Gene3D G3DSA:3.30.230.10 5 207 5.0E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 SUPERFAMILY SSF55060 205 381 1.15E-52 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 SUPERFAMILY SSF54211 3 203 4.63E-64 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 PANTHER PTHR10457 2 381 8.5E-150 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1137 39bcf1e108cf7cb32785f3d2f4eb1125 383 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 YPO0555 65c6b06380d856a06970098d06200342 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 1.0E-47 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO0555 65c6b06380d856a06970098d06200342 356 PANTHER PTHR21015:SF22 1 356 2.9E-136 T 22-04-2016 YPO0555 65c6b06380d856a06970098d06200342 356 SUPERFAMILY SSF53756 6 351 5.03E-128 T 22-04-2016 YPO0555 65c6b06380d856a06970098d06200342 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 323 1.0E-33 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO0555 65c6b06380d856a06970098d06200342 356 PANTHER PTHR21015 1 356 2.9E-136 T 22-04-2016 YPO0555 65c6b06380d856a06970098d06200342 356 Gene3D G3DSA:3.40.50.2000 254 336 2.6E-5 T 22-04-2016 YPO0555 65c6b06380d856a06970098d06200342 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.158 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO0555 65c6b06380d856a06970098d06200342 356 Gene3D G3DSA:3.40.50.2000 4 196 4.3E-75 T 22-04-2016 YPO0555 65c6b06380d856a06970098d06200342 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 347 3.7E-113 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO2438 26fd68ff51b191d93a0a40c17edef47c 220 Pfam PF01464 Transglycosylase SLT domain 57 182 5.7E-29 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPO2438 26fd68ff51b191d93a0a40c17edef47c 220 Gene3D G3DSA:1.10.530.10 53 218 1.7E-33 T 22-04-2016 YPO2438 26fd68ff51b191d93a0a40c17edef47c 220 PANTHER PTHR21666:SF216 51 220 4.3E-112 T 22-04-2016 YPO2438 26fd68ff51b191d93a0a40c17edef47c 220 SUPERFAMILY SSF53955 53 217 1.66E-29 T 22-04-2016 IPR023346 Lysozyme-like domain YPO2438 26fd68ff51b191d93a0a40c17edef47c 220 PANTHER PTHR21666 51 220 4.3E-112 T 22-04-2016 YPO2438 26fd68ff51b191d93a0a40c17edef47c 220 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 75 103 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPO2796 3f786a01c7f234df3e243105f61522ca 638 SUPERFAMILY SSF51126 24 323 4.39E-31 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO2796 3f786a01c7f234df3e243105f61522ca 638 SMART SM00869 380 627 7.1E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO2796 3f786a01c7f234df3e243105f61522ca 638 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 221 638 2.6E-116 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO2796 3f786a01c7f234df3e243105f61522ca 638 Gene3D G3DSA:2.160.20.20 44 324 2.6E-44 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO2796 3f786a01c7f234df3e243105f61522ca 638 Pfam PF03212 Pertactin 203 323 2.3E-31 T 22-04-2016 IPR004899 Pertactin, central region YPO2796 3f786a01c7f234df3e243105f61522ca 638 PANTHER PTHR35037 1 638 2.8E-150 T 22-04-2016 YPO2796 3f786a01c7f234df3e243105f61522ca 638 Gene3D G3DSA:2.40.128.130 339 638 3.3E-74 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO2796 3f786a01c7f234df3e243105f61522ca 638 SUPERFAMILY SSF103515 349 638 3.66E-47 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO2796 3f786a01c7f234df3e243105f61522ca 638 PRINTS PR01484 Pertactin virulence factor family signature 527 550 4.2E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO2796 3f786a01c7f234df3e243105f61522ca 638 PRINTS PR01484 Pertactin virulence factor family signature 421 445 4.2E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO2796 3f786a01c7f234df3e243105f61522ca 638 PRINTS PR01484 Pertactin virulence factor family signature 508 525 4.2E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO2796 3f786a01c7f234df3e243105f61522ca 638 PRINTS PR01484 Pertactin virulence factor family signature 618 638 4.2E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO2796 3f786a01c7f234df3e243105f61522ca 638 PRINTS PR01484 Pertactin virulence factor family signature 593 618 4.2E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO2796 3f786a01c7f234df3e243105f61522ca 638 PRINTS PR01484 Pertactin virulence factor family signature 359 377 4.2E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO2796 3f786a01c7f234df3e243105f61522ca 638 Pfam PF03797 Autotransporter beta-domain 381 621 3.6E-47 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 Gene3D G3DSA:3.40.50.1010 4 174 9.0E-51 T 22-04-2016 IPR029060 PIN domain-like YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 PANTHER PTHR10133:SF39 1 249 8.0E-181 T 22-04-2016 YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 SUPERFAMILY SSF47807 160 241 4.64E-21 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 6.1E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 159 1.5E-31 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 Gene3D G3DSA:1.10.150.20 175 235 8.0E-23 T 22-04-2016 YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 SMART SM00279 162 197 2.1E-9 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 SMART SM00475 3 250 4.7E-92 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 SUPERFAMILY SSF88723 4 159 1.23E-40 T 22-04-2016 IPR029060 PIN domain-like YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 44.192 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 YPO1032 d71e284dc889626b8f72a1a4c1a3ebf9 251 PANTHER PTHR10133 1 249 8.0E-181 T 22-04-2016 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 756 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 PIRSF PIRSF000382 2 758 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 PANTHER PTHR30519:SF0 1 756 0.0 T 22-04-2016 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 Gene3D G3DSA:3.20.20.210 390 756 1.0E-134 T 22-04-2016 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 429 751 9.4E-160 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 756 37.598 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 PANTHER PTHR30519 1 756 0.0 T 22-04-2016 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 Gene3D G3DSA:3.20.20.210 5 387 1.7E-151 T 22-04-2016 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 313 4.7E-127 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 SUPERFAMILY SSF51726 5 392 1.22E-113 T 22-04-2016 YPO3788 cd3141a60ef3da5b512ab15b19a99a3c 758 SUPERFAMILY SSF51726 394 756 6.15E-119 T 22-04-2016 YPO3333 ad3582e6c8cd701dd84ffdfbab45960d 293 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 2.0E-35 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3333 ad3582e6c8cd701dd84ffdfbab45960d 293 Gene3D G3DSA:3.20.20.150 9 277 6.6E-47 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3333 ad3582e6c8cd701dd84ffdfbab45960d 293 SUPERFAMILY SSF51658 13 278 3.4E-56 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3333 ad3582e6c8cd701dd84ffdfbab45960d 293 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 283 1.3E-136 T 22-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 YPO3333 ad3582e6c8cd701dd84ffdfbab45960d 293 PANTHER PTHR12110:SF17 1 293 4.9E-121 T 22-04-2016 YPO3333 ad3582e6c8cd701dd84ffdfbab45960d 293 PANTHER PTHR12110 1 293 4.9E-121 T 22-04-2016 YPO2569 216b551e4880331adcc390331b09576f 147 PANTHER PTHR30505:SF3 1 147 3.0E-74 T 22-04-2016 YPO2569 216b551e4880331adcc390331b09576f 147 Gene3D G3DSA:3.40.930.10 1 146 4.9E-54 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2569 216b551e4880331adcc390331b09576f 147 PANTHER PTHR30505 1 147 3.0E-74 T 22-04-2016 YPO2569 216b551e4880331adcc390331b09576f 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 1.2E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2569 216b551e4880331adcc390331b09576f 147 SUPERFAMILY SSF55804 1 145 3.27E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPO2497 f376752b6a692701924850681399598d 313 Gene3D G3DSA:3.40.190.10 180 264 3.5E-20 T 22-04-2016 YPO2497 f376752b6a692701924850681399598d 313 Gene3D G3DSA:1.10.10.10 7 91 3.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2497 f376752b6a692701924850681399598d 313 SUPERFAMILY SSF53850 91 298 1.79E-38 T 22-04-2016 YPO2497 f376752b6a692701924850681399598d 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2497 f376752b6a692701924850681399598d 313 Gene3D G3DSA:3.40.190.10 95 179 1.5E-18 T 22-04-2016 YPO2497 f376752b6a692701924850681399598d 313 PANTHER PTHR30537 1 312 1.4E-221 T 22-04-2016 YPO2497 f376752b6a692701924850681399598d 313 SUPERFAMILY SSF46785 8 114 4.99E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2497 f376752b6a692701924850681399598d 313 Pfam PF03466 LysR substrate binding domain 90 294 3.1E-34 T 22-04-2016 IPR005119 LysR, substrate-binding YPO2497 f376752b6a692701924850681399598d 313 PANTHER PTHR30537:SF18 1 312 1.4E-221 T 22-04-2016 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 18 380 7.1E-89 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 PIRSF PIRSF038994 1 387 6.9E-133 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 Gene3D G3DSA:2.30.40.10 4 54 1.5E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 PANTHER PTHR11113:SF5 1 387 0.0 T 22-04-2016 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 PANTHER PTHR11113 1 387 0.0 T 22-04-2016 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 Gene3D G3DSA:3.20.20.140 55 334 7.4E-91 T 22-04-2016 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 Pfam PF01979 Amidohydrolase family 49 382 1.0E-21 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 SUPERFAMILY SSF51338 8 52 1.26E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 SUPERFAMILY SSF51338 354 386 1.26E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 Gene3D G3DSA:2.30.40.10 335 384 1.9E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO0838 33f4a373fbca137962e87ff6cbce570c 388 SUPERFAMILY SSF51556 53 354 7.85E-91 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO3650 e7fc72c6a5b4bb3b22cdf9661a8937f5 454 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPO3650 e7fc72c6a5b4bb3b22cdf9661a8937f5 454 PANTHER PTHR23508 9 452 3.5E-175 T 22-04-2016 YPO3650 e7fc72c6a5b4bb3b22cdf9661a8937f5 454 Pfam PF07690 Major Facilitator Superfamily 31 398 5.2E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO3650 e7fc72c6a5b4bb3b22cdf9661a8937f5 454 SUPERFAMILY SSF103473 23 435 1.96E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3650 e7fc72c6a5b4bb3b22cdf9661a8937f5 454 PANTHER PTHR23508:SF17 9 452 3.5E-175 T 22-04-2016 YPO3650 e7fc72c6a5b4bb3b22cdf9661a8937f5 454 Gene3D G3DSA:1.20.1250.20 258 445 2.5E-9 T 22-04-2016 YPO3650 e7fc72c6a5b4bb3b22cdf9661a8937f5 454 Gene3D G3DSA:1.20.1250.20 23 233 7.9E-22 T 22-04-2016 YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 PIRSF PIRSF005496 32 851 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 Gene3D G3DSA:3.40.50.300 239 385 1.5E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 SMART SM00490 261 366 2.6E-15 T 22-04-2016 IPR001650 Helicase, C-terminal YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 Pfam PF08482 ATP-dependent helicase C-terminal 705 837 2.4E-53 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 Pfam PF00270 DEAD/DEAH box helicase 47 200 3.6E-11 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 Pfam PF00271 Helicase conserved C-terminal domain 243 365 7.4E-12 T 22-04-2016 IPR001650 Helicase, C-terminal YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 Pfam PF04408 Helicase associated domain (HA2) 427 481 1.7E-12 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 PANTHER PTHR18934 37 467 8.1E-162 T 22-04-2016 YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 37 849 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 SUPERFAMILY SSF52540 50 377 2.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 SMART SM00847 426 517 1.0E-15 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 Gene3D G3DSA:3.40.50.300 37 198 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3394 3e5c33fa0bc70595e45f29697200be7c 852 SMART SM00487 35 224 9.7E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 460 3.0E-131 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 Pfam PF00696 Amino acid kinase family 16 289 1.4E-45 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 16 461 2.7E-139 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 SUPERFAMILY SSF55021 308 369 7.44E-14 T 22-04-2016 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 Gene3D G3DSA:3.40.1160.10 15 65 9.4E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 Gene3D G3DSA:3.40.1160.10 118 304 9.4E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 SUPERFAMILY SSF55021 389 460 1.72E-14 T 22-04-2016 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 SUPERFAMILY SSF53633 16 304 1.23E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 ProSitePatterns PS00324 Aspartokinase signature. 18 26 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 PANTHER PTHR21499:SF3 7 461 1.6E-142 T 22-04-2016 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 PIRSF PIRSF000726 14 461 1.8E-150 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO3719 3c86b118f14d153989f9bb2c67c91cff 461 PANTHER PTHR21499 7 461 1.6E-142 T 22-04-2016 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 Pfam PF08245 Mur ligase middle domain 54 196 6.7E-9 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 430 1.5E-103 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 SUPERFAMILY SSF53623 13 296 3.48E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 Gene3D G3DSA:3.40.1190.10 11 299 2.3E-88 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 357 1.4E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 PANTHER PTHR11136 8 433 1.2E-141 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 PANTHER PTHR11136:SF0 8 433 1.2E-141 T 22-04-2016 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 Gene3D G3DSA:3.90.190.20 300 432 7.9E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 SUPERFAMILY SSF53244 298 431 2.14E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO2769 dcdc4e4099485f0de9937e593971f4b8 434 PIRSF PIRSF001563 5 434 2.9E-110 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 SUPERFAMILY SSF82866 296 497 6.28E-49 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 SUPERFAMILY SSF82693 566 672 3.87E-27 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 Gene3D G3DSA:3.30.2090.10 181 275 3.3E-28 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PANTHER PTHR32063 1 1041 0.0 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 SUPERFAMILY SSF82693 136 182 1.78E-25 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 SUPERFAMILY SSF82693 274 330 1.78E-25 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.9E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 SUPERFAMILY SSF82693 39 131 2.35E-27 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 SUPERFAMILY SSF82714 182 272 2.62E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 Gene3D G3DSA:3.30.2090.10 723 810 6.5E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 SUPERFAMILY SSF82714 723 810 1.57E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 SUPERFAMILY SSF82866 807 1031 1.83E-46 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 Gene3D G3DSA:3.30.70.1430 39 139 1.6E-34 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 PANTHER PTHR32063:SF32 1 1041 0.0 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 Gene3D G3DSA:1.10.3850.10 815 1028 1.1E-56 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 Gene3D G3DSA:1.10.3850.10 279 498 4.9E-59 T 22-04-2016 YPO3043 9c7c4b099f93dfbf9317a7022212d9b5 1043 Gene3D G3DSA:3.30.70.1430 568 672 3.2E-31 T 22-04-2016 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 141 174 2.2E-15 T 22-04-2016 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 291 3.7E-142 T 22-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 PANTHER PTHR11938 1 206 2.9E-158 T 22-04-2016 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:1.20.5.480 249 294 4.0E-27 T 22-04-2016 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 Pfam PF09163 Formate dehydrogenase N, transmembrane 248 291 5.5E-23 T 22-04-2016 IPR015246 Formate dehydrogenase, transmembrane YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 135 146 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 PANTHER PTHR11938:SF84 1 206 2.9E-158 T 22-04-2016 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 SUPERFAMILY SSF54862 29 275 9.63E-70 T 22-04-2016 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 31 105 1.6E-36 T 22-04-2016 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 175 229 1.6E-36 T 22-04-2016 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 Gene3D G3DSA:3.30.70.20 106 140 2.7E-11 T 22-04-2016 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 PIRSF PIRSF036298 1 320 3.8E-168 T 22-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 YPO4057 4bd4d7dd9822d8c2cd7d624ebc957273 323 Pfam PF13247 4Fe-4S dicluster domain 94 190 7.4E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2939 6bdef33c6aa0d5b1946e5f96669a913f 174 PANTHER PTHR35850 2 172 1.2E-109 T 22-04-2016 YPO2939 6bdef33c6aa0d5b1946e5f96669a913f 174 PANTHER PTHR35850:SF1 2 172 1.2E-109 T 22-04-2016 YPO2939 6bdef33c6aa0d5b1946e5f96669a913f 174 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 2.6E-59 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO2939 6bdef33c6aa0d5b1946e5f96669a913f 174 PIRSF PIRSF028301 2 174 6.1E-61 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO2939 6bdef33c6aa0d5b1946e5f96669a913f 174 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 1.5E-57 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO3785 f539d0b11b4a478ab65d7473fc29fbca 276 Pfam PF13350 Tyrosine phosphatase family 12 276 2.3E-57 T 22-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type YPO3785 f539d0b11b4a478ab65d7473fc29fbca 276 PANTHER PTHR31126:SF21 12 91 9.2E-76 T 22-04-2016 YPO3785 f539d0b11b4a478ab65d7473fc29fbca 276 PANTHER PTHR31126:SF21 134 276 9.2E-76 T 22-04-2016 YPO3785 f539d0b11b4a478ab65d7473fc29fbca 276 Gene3D G3DSA:3.90.190.10 16 214 1.6E-14 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPO3785 f539d0b11b4a478ab65d7473fc29fbca 276 PANTHER PTHR31126 12 91 9.2E-76 T 22-04-2016 YPO3785 f539d0b11b4a478ab65d7473fc29fbca 276 PANTHER PTHR31126 134 276 9.2E-76 T 22-04-2016 YPO3785 f539d0b11b4a478ab65d7473fc29fbca 276 SUPERFAMILY SSF52799 12 275 3.53E-51 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPO0646 00235c745d8298a44729e9f9ec274d28 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 7.6E-135 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.5E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 PANTHER PTHR11735:SF6 1 336 2.2E-168 T 22-04-2016 YPO0646 00235c745d8298a44729e9f9ec274d28 337 Pfam PF00814 Glycoprotease family 24 307 1.0E-102 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.855 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 SUPERFAMILY SSF53067 1 309 3.74E-43 T 22-04-2016 YPO0646 00235c745d8298a44729e9f9ec274d28 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 4.1E-126 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 PANTHER PTHR11735 1 336 2.2E-168 T 22-04-2016 YPO0646 00235c745d8298a44729e9f9ec274d28 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YPO0646 00235c745d8298a44729e9f9ec274d28 337 Gene3D G3DSA:3.30.420.40 1 159 2.5E-49 T 22-04-2016 YPO0719 bb297d45bc7197c4195f47d9ff9f842f 141 SUPERFAMILY SSF140566 7 130 2.48E-22 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPO0719 bb297d45bc7197c4195f47d9ff9f842f 141 Pfam PF05130 FlgN protein 7 130 5.2E-14 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPO0719 bb297d45bc7197c4195f47d9ff9f842f 141 Gene3D G3DSA:1.20.58.300 5 130 2.5E-23 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPO3720 eff84d95942eb685a597efd20f20d124 561 PANTHER PTHR34597 31 561 3.8E-226 T 22-04-2016 YPO3720 eff84d95942eb685a597efd20f20d124 561 PIRSF PIRSF029745 1 561 4.5E-128 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPO3720 eff84d95942eb685a597efd20f20d124 561 Gene3D G3DSA:2.40.160.50 185 561 3.1E-95 T 22-04-2016 YPO3720 eff84d95942eb685a597efd20f20d124 561 Pfam PF08479 POTRA domain, ShlB-type 83 156 1.3E-16 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPO3720 eff84d95942eb685a597efd20f20d124 561 Gene3D G3DSA:3.10.20.310 78 156 6.7E-18 T 22-04-2016 YPO3720 eff84d95942eb685a597efd20f20d124 561 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 165 561 2.2E-128 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPO3720 eff84d95942eb685a597efd20f20d124 561 PANTHER PTHR34597:SF2 31 561 3.8E-226 T 22-04-2016 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 SUPERFAMILY SSF52313 6 236 7.85E-97 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain YPO1044 2b0c889592ff59239bc3e65502a737b1 241 Gene3D G3DSA:1.10.287.610 100 152 1.2E-26 T 22-04-2016 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.585 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 Gene3D G3DSA:3.40.50.10490 23 99 7.0E-69 T 22-04-2016 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 Gene3D G3DSA:3.40.50.10490 158 236 7.0E-69 T 22-04-2016 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 PANTHER PTHR12534 1 235 9.6E-126 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 4.8E-108 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 YPO1044 2b0c889592ff59239bc3e65502a737b1 241 Pfam PF00318 Ribosomal protein S2 9 224 2.4E-94 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1358 16541e3513d00e7b1a944d8529938840 573 SUPERFAMILY SSF52518 2 179 4.21E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO1358 16541e3513d00e7b1a944d8529938840 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPO1358 16541e3513d00e7b1a944d8529938840 573 Gene3D G3DSA:3.40.50.970 353 552 1.2E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO1358 16541e3513d00e7b1a944d8529938840 573 PANTHER PTHR18968:SF12 1 573 0.0 T 22-04-2016 YPO1358 16541e3513d00e7b1a944d8529938840 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 3.4E-43 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPO1358 16541e3513d00e7b1a944d8529938840 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 3.8E-40 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPO1358 16541e3513d00e7b1a944d8529938840 573 SUPERFAMILY SSF52467 182 351 1.42E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO1358 16541e3513d00e7b1a944d8529938840 573 Gene3D G3DSA:3.40.50.970 1 176 5.0E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO1358 16541e3513d00e7b1a944d8529938840 573 PANTHER PTHR18968 1 573 0.0 T 22-04-2016 YPO1358 16541e3513d00e7b1a944d8529938840 573 SUPERFAMILY SSF52518 357 558 3.93E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO1358 16541e3513d00e7b1a944d8529938840 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 319 1.2E-32 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPO1358 16541e3513d00e7b1a944d8529938840 573 Gene3D G3DSA:3.40.50.1220 185 341 1.2E-44 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO4013 0e041f7ec115a276fdf49e49795b286c 563 Gene3D G3DSA:3.40.720.10 250 541 1.7E-10 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO4013 0e041f7ec115a276fdf49e49795b286c 563 SUPERFAMILY SSF53649 250 546 3.74E-15 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO4013 0e041f7ec115a276fdf49e49795b286c 563 PANTHER PTHR30443:SF3 1 562 0.0 T 22-04-2016 YPO4013 0e041f7ec115a276fdf49e49795b286c 563 PANTHER PTHR30443 1 562 0.0 T 22-04-2016 YPO4013 0e041f7ec115a276fdf49e49795b286c 563 Pfam PF08019 Domain of unknown function (DUF1705) 56 221 2.2E-19 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 YPO4013 0e041f7ec115a276fdf49e49795b286c 563 Pfam PF00884 Sulfatase 250 538 1.1E-39 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 SUPERFAMILY SSF143800 1 66 3.65E-26 T 22-04-2016 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 8.2E-33 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.3E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.3E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.3E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 PANTHER PTHR33280 1 66 2.8E-37 T 22-04-2016 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.069 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 PANTHER PTHR33280:SF2 1 66 2.8E-37 T 22-04-2016 YPO0111 20b23a19f8ee5acc41d588eb597a09de 71 Pfam PF01197 Ribosomal protein L31 1 64 3.5E-29 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1211 4c15ee05ff015a65a21f1ceb0b17f6bb 169 PANTHER PTHR35890:SF4 9 169 5.3E-103 T 22-04-2016 YPO1211 4c15ee05ff015a65a21f1ceb0b17f6bb 169 PIRSF PIRSF006865 1 169 5.0E-67 T 22-04-2016 IPR005658 Proteinase inhibitor I11, ecotin YPO1211 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Hamap MF_00706 Ecotin [eco]. 4 169 41.115 T 22-04-2016 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YPO1211 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Pfam PF03974 Ecotin 36 159 1.1E-49 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain YPO1211 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Gene3D G3DSA:2.60.40.550 30 110 1.9E-37 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain YPO1211 4c15ee05ff015a65a21f1ceb0b17f6bb 169 Gene3D G3DSA:4.10.1230.10 111 168 7.2E-28 T 22-04-2016 IPR027438 Ecotin, C-terminal YPO1211 4c15ee05ff015a65a21f1ceb0b17f6bb 169 SUPERFAMILY SSF49772 32 167 4.45E-53 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain YPO1211 4c15ee05ff015a65a21f1ceb0b17f6bb 169 PANTHER PTHR35890 9 169 5.3E-103 T 22-04-2016 YPO0311 529a47e44590852b3b26886fdad28095 288 PANTHER PTHR11048 9 288 3.3E-97 T 22-04-2016 YPO0311 529a47e44590852b3b26886fdad28095 288 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 287 2.1E-111 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 YPO0311 529a47e44590852b3b26886fdad28095 288 Pfam PF01040 UbiA prenyltransferase family 28 270 2.8E-67 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 YPO0311 529a47e44590852b3b26886fdad28095 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site YPO0311 529a47e44590852b3b26886fdad28095 288 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.223 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:3.40.50.300 206 344 7.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF09382 RQC domain 406 516 2.2E-37 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 603 9.4E-266 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 PANTHER PTHR13710:SF81 13 609 0.0 T 22-04-2016 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00956 411 514 1.2E-51 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF00270 DEAD/DEAH box helicase 28 185 1.1E-20 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 SUPERFAMILY SSF52540 208 456 5.69E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF00271 Helicase conserved C-terminal domain 227 331 4.8E-19 T 22-04-2016 IPR001650 Helicase, C-terminal YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF00570 HRDC domain 535 601 1.4E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 SUPERFAMILY SSF47819 532 608 2.18E-26 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:1.10.10.10 345 516 7.3E-62 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:3.40.50.300 14 203 7.4E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 Pfam PF16124 RecQ zinc-binding 343 404 3.8E-16 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 2.5E-200 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 SUPERFAMILY SSF52540 14 201 1.27E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 PANTHER PTHR13710 13 609 0.0 T 22-04-2016 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 Gene3D G3DSA:1.10.150.80 532 606 1.4E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00341 531 610 3.1E-26 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00487 22 218 2.7E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO3833 d0f22b545b5e8527c9ac9432c36f9f28 610 SMART SM00490 250 331 5.9E-28 T 22-04-2016 IPR001650 Helicase, C-terminal YPO1593 9b09129bfd4215a5b42613873234706e 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 2.6E-55 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPO1593 9b09129bfd4215a5b42613873234706e 198 PIRSF PIRSF006305 1 193 1.6E-37 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPO1593 9b09129bfd4215a5b42613873234706e 198 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.213 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPO1593 9b09129bfd4215a5b42613873234706e 198 Gene3D G3DSA:3.90.950.10 2 189 5.5E-53 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPO1593 9b09129bfd4215a5b42613873234706e 198 PANTHER PTHR11746 120 190 4.0E-35 T 22-04-2016 YPO1593 9b09129bfd4215a5b42613873234706e 198 PANTHER PTHR11746:SF102 120 190 4.0E-35 T 22-04-2016 YPO1593 9b09129bfd4215a5b42613873234706e 198 Pfam PF02545 Maf-like protein 3 185 1.9E-41 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPO1593 9b09129bfd4215a5b42613873234706e 198 SUPERFAMILY SSF52972 1 186 3.86E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPO3931 d7968f9a2cc04dfc804276cd8271aed8 214 PANTHER PTHR33795:SF1 40 214 9.9E-89 T 22-04-2016 YPO3931 d7968f9a2cc04dfc804276cd8271aed8 214 PANTHER PTHR33795 40 214 9.9E-89 T 22-04-2016 YPO3931 d7968f9a2cc04dfc804276cd8271aed8 214 Pfam PF13518 Helix-turn-helix domain 106 158 5.0E-12 T 22-04-2016 YPO3931 d7968f9a2cc04dfc804276cd8271aed8 214 Pfam PF13518 Helix-turn-helix domain 51 96 5.6E-9 T 22-04-2016 YPO3931 d7968f9a2cc04dfc804276cd8271aed8 214 SUPERFAMILY SSF48295 33 96 3.66E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPO3931 d7968f9a2cc04dfc804276cd8271aed8 214 Gene3D G3DSA:1.10.10.60 103 197 5.9E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3931 d7968f9a2cc04dfc804276cd8271aed8 214 Gene3D G3DSA:1.10.10.10 48 95 6.3E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3931 d7968f9a2cc04dfc804276cd8271aed8 214 SUPERFAMILY SSF46689 100 201 1.02E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0484 32b80e66c5f636eda80385f85ba52da9 266 Pfam PF06738 Putative threonine/serine exporter 21 260 4.8E-68 T 22-04-2016 IPR010619 Putative threonine/serine exporter YPO0484 32b80e66c5f636eda80385f85ba52da9 266 PANTHER PTHR34390 1 265 8.2E-151 T 22-04-2016 YPO0484 32b80e66c5f636eda80385f85ba52da9 266 PANTHER PTHR34390:SF2 1 265 8.2E-151 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 418 922 1.8E-84 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PANTHER PTHR24093:SF319 215 956 0.0 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Gene3D G3DSA:3.30.70.100 228 293 1.5E-22 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Pfam PF00403 Heavy-metal-associated domain 234 286 6.7E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Pfam PF00403 Heavy-metal-associated domain 74 128 1.3E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Pfam PF00403 Heavy-metal-associated domain 8 62 2.3E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Gene3D G3DSA:3.40.1110.10 663 772 3.3E-17 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPO3086 f3b81d5b099088949847fd32a3603a57 961 SUPERFAMILY SSF81653 449 546 6.93E-25 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 SUPERFAMILY SSF55008 226 294 5.76E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Pfam PF00122 E1-E2 ATPase 417 638 8.4E-63 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Gene3D G3DSA:3.30.70.100 3 64 1.4E-13 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 379 954 5.8E-179 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Pfam PF00702 haloacid dehalogenase-like hydrolase 645 859 1.4E-46 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 360 954 6.8E-185 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 SUPERFAMILY SSF55008 70 133 3.01E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 SUPERFAMILY SSF81665 413 450 1.7E-10 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 SUPERFAMILY SSF81665 894 911 1.7E-10 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 SUPERFAMILY SSF81665 547 642 1.7E-10 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PANTHER PTHR24093 215 956 0.0 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 SUPERFAMILY SSF56784 703 951 7.33E-61 T 22-04-2016 IPR023214 HAD-like domain YPO3086 f3b81d5b099088949847fd32a3603a57 961 SUPERFAMILY SSF56784 646 666 7.33E-61 T 22-04-2016 IPR023214 HAD-like domain YPO3086 f3b81d5b099088949847fd32a3603a57 961 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 650 656 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPO3086 f3b81d5b099088949847fd32a3603a57 961 Gene3D G3DSA:3.30.70.100 71 130 1.3E-16 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Gene3D G3DSA:3.40.50.1000 621 662 1.1E-53 T 22-04-2016 IPR023214 HAD-like domain YPO3086 f3b81d5b099088949847fd32a3603a57 961 Gene3D G3DSA:3.40.50.1000 773 914 1.1E-53 T 22-04-2016 IPR023214 HAD-like domain YPO3086 f3b81d5b099088949847fd32a3603a57 961 SUPERFAMILY SSF55008 2 67 8.77E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00943 Copper-transporting ATPase signature 436 454 6.7E-7 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00943 Copper-transporting ATPase signature 569 583 6.7E-7 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00943 Copper-transporting ATPase signature 822 839 6.7E-7 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00943 Copper-transporting ATPase signature 364 383 6.7E-7 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00943 Copper-transporting ATPase signature 631 646 6.7E-7 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 662 7.2E-25 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 845 864 7.2E-25 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 792 802 7.2E-25 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 868 880 7.2E-25 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 510 7.2E-25 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 770 781 7.2E-25 T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 ProSitePatterns PS01047 Heavy-metal-associated domain. 232 261 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 ProSitePatterns PS01047 Heavy-metal-associated domain. 75 104 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YPO3086 f3b81d5b099088949847fd32a3603a57 961 ProSitePatterns PS01229 Hypothetical cof family signature 2. 845 867 - T 22-04-2016 YPO3086 f3b81d5b099088949847fd32a3603a57 961 Gene3D G3DSA:2.70.150.10 378 546 2.8E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO3383 44239833b7604151ef2cad49e7ba3769 506 Pfam PF13286 Phosphohydrolase-associated domain 462 501 7.6E-6 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain YPO3383 44239833b7604151ef2cad49e7ba3769 506 SUPERFAMILY SSF109604 252 433 4.71E-64 T 22-04-2016 YPO3383 44239833b7604151ef2cad49e7ba3769 506 SUPERFAMILY SSF109604 30 134 4.71E-64 T 22-04-2016 YPO3383 44239833b7604151ef2cad49e7ba3769 506 SUPERFAMILY SSF109604 183 216 4.71E-64 T 22-04-2016 YPO3383 44239833b7604151ef2cad49e7ba3769 506 SUPERFAMILY SSF109604 485 503 4.71E-64 T 22-04-2016 YPO3383 44239833b7604151ef2cad49e7ba3769 506 SMART SM00471 62 283 2.6E-11 T 22-04-2016 IPR003607 HD/PDEase domain YPO3383 44239833b7604151ef2cad49e7ba3769 506 Gene3D G3DSA:1.10.3210.10 184 269 4.9E-68 T 22-04-2016 IPR006674 HD domain YPO3383 44239833b7604151ef2cad49e7ba3769 506 Gene3D G3DSA:1.10.3210.10 4 122 4.9E-68 T 22-04-2016 IPR006674 HD domain YPO3383 44239833b7604151ef2cad49e7ba3769 506 PANTHER PTHR11373 183 342 5.2E-98 T 22-04-2016 YPO3383 44239833b7604151ef2cad49e7ba3769 506 PANTHER PTHR11373 23 142 5.2E-98 T 22-04-2016 YPO3383 44239833b7604151ef2cad49e7ba3769 506 Gene3D G3DSA:1.10.3410.10 270 391 4.8E-33 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain YPO3383 44239833b7604151ef2cad49e7ba3769 506 Pfam PF01966 HD domain 66 133 3.0E-10 T 22-04-2016 IPR006674 HD domain YPO3383 44239833b7604151ef2cad49e7ba3769 506 PANTHER PTHR11373:SF29 183 342 5.2E-98 T 22-04-2016 YPO3383 44239833b7604151ef2cad49e7ba3769 506 PANTHER PTHR11373:SF29 23 142 5.2E-98 T 22-04-2016 YPO3383 44239833b7604151ef2cad49e7ba3769 506 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 504 5.5E-126 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 YPO3383 44239833b7604151ef2cad49e7ba3769 506 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 506 53.218 T 22-04-2016 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 YPO3383 44239833b7604151ef2cad49e7ba3769 506 Gene3D G3DSA:1.10.3550.10 392 504 3.0E-35 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain YPO3383 44239833b7604151ef2cad49e7ba3769 506 Gene3D G3DSA:1.10.3550.10 123 160 3.0E-35 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain YPO2668 78433cb415f6d0b1ce9fb4bd1a7738c6 231 Pfam PF05194 UreE urease accessory protein, C-terminal domain 85 220 3.1E-6 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 YPO2668 78433cb415f6d0b1ce9fb4bd1a7738c6 231 SUPERFAMILY SSF69287 3 79 5.49E-18 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal YPO2668 78433cb415f6d0b1ce9fb4bd1a7738c6 231 Pfam PF02814 UreE urease accessory protein, N-terminal domain 15 73 7.4E-17 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal YPO2668 78433cb415f6d0b1ce9fb4bd1a7738c6 231 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 159 14.838 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 YPO2668 78433cb415f6d0b1ce9fb4bd1a7738c6 231 Gene3D G3DSA:2.60.260.20 3 79 1.6E-24 T 22-04-2016 YPO2668 78433cb415f6d0b1ce9fb4bd1a7738c6 231 SMART SM00988 11 75 3.1E-16 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal YPO1373 71650d33ed8e63206e675c366046e9ee 594 Gene3D G3DSA:1.20.1560.10 17 335 3.9E-44 T 22-04-2016 YPO1373 71650d33ed8e63206e675c366046e9ee 594 Gene3D G3DSA:3.40.50.300 374 592 1.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1373 71650d33ed8e63206e675c366046e9ee 594 Pfam PF00664 ABC transporter transmembrane region 32 297 2.8E-38 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1373 71650d33ed8e63206e675c366046e9ee 594 SMART SM00382 381 566 2.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1373 71650d33ed8e63206e675c366046e9ee 594 PANTHER PTHR24221 6 593 0.0 T 22-04-2016 YPO1373 71650d33ed8e63206e675c366046e9ee 594 PANTHER PTHR24221:SF261 6 593 0.0 T 22-04-2016 YPO1373 71650d33ed8e63206e675c366046e9ee 594 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1373 71650d33ed8e63206e675c366046e9ee 594 SUPERFAMILY SSF90123 17 335 3.4E-54 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1373 71650d33ed8e63206e675c366046e9ee 594 SUPERFAMILY SSF52540 369 588 2.08E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1373 71650d33ed8e63206e675c366046e9ee 594 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 27 562 5.0E-207 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 YPO1373 71650d33ed8e63206e675c366046e9ee 594 Pfam PF00005 ABC transporter 375 520 3.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2494 9688bd7cad0eb67f83f06b1aeeb9e450 493 ProSitePatterns PS01303 BCCT family of transporters signature. 256 265 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPO2494 9688bd7cad0eb67f83f06b1aeeb9e450 493 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 3 443 5.8E-112 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 YPO2494 9688bd7cad0eb67f83f06b1aeeb9e450 493 PANTHER PTHR30047:SF5 1 493 0.0 T 22-04-2016 YPO2494 9688bd7cad0eb67f83f06b1aeeb9e450 493 PANTHER PTHR30047 1 493 0.0 T 22-04-2016 YPO2494 9688bd7cad0eb67f83f06b1aeeb9e450 493 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 2 443 2.5E-149 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 YPO3571 04ef9042f43a0fee95eb20210ee798f3 100 PANTHER PTHR35849:SF1 1 99 1.3E-39 T 22-04-2016 YPO3571 04ef9042f43a0fee95eb20210ee798f3 100 Pfam PF13466 STAS domain 14 91 8.5E-19 T 22-04-2016 IPR002645 STAS domain YPO3571 04ef9042f43a0fee95eb20210ee798f3 100 PANTHER PTHR35849 1 99 1.3E-39 T 22-04-2016 YPO3571 04ef9042f43a0fee95eb20210ee798f3 100 Gene3D G3DSA:3.30.750.24 13 98 6.3E-15 T 22-04-2016 IPR002645 STAS domain YPO3571 04ef9042f43a0fee95eb20210ee798f3 100 SUPERFAMILY SSF52091 13 96 1.04E-16 T 22-04-2016 IPR002645 STAS domain YPO1737 499fb350548e34350a1d055e7654fd4d 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO1737 499fb350548e34350a1d055e7654fd4d 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO1737 499fb350548e34350a1d055e7654fd4d 128 Pfam PF12833 Helix-turn-helix domain 30 108 4.9E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO1737 499fb350548e34350a1d055e7654fd4d 128 PANTHER PTHR11019 6 115 5.8E-60 T 22-04-2016 YPO1737 499fb350548e34350a1d055e7654fd4d 128 Gene3D G3DSA:1.10.10.60 5 60 5.8E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1737 499fb350548e34350a1d055e7654fd4d 128 SUPERFAMILY SSF46689 64 110 2.91E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1737 499fb350548e34350a1d055e7654fd4d 128 PANTHER PTHR11019:SF84 6 115 5.8E-60 T 22-04-2016 YPO1737 499fb350548e34350a1d055e7654fd4d 128 SUPERFAMILY SSF46689 11 58 2.42E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1737 499fb350548e34350a1d055e7654fd4d 128 Gene3D G3DSA:1.10.10.60 62 110 1.6E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1737 499fb350548e34350a1d055e7654fd4d 128 SMART SM00342 24 107 3.9E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO3668 7ad248668a8ac0b339c193b2a9746291 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.197 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPO3668 7ad248668a8ac0b339c193b2a9746291 197 SUPERFAMILY SSF52972 2 184 2.94E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPO3668 7ad248668a8ac0b339c193b2a9746291 197 PANTHER PTHR11746 120 190 4.1E-15 T 22-04-2016 YPO3668 7ad248668a8ac0b339c193b2a9746291 197 Gene3D G3DSA:3.90.950.10 2 185 9.3E-68 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPO3668 7ad248668a8ac0b339c193b2a9746291 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 4.0E-63 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPO3668 7ad248668a8ac0b339c193b2a9746291 197 PIRSF PIRSF006305 1 191 8.5E-50 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPO3668 7ad248668a8ac0b339c193b2a9746291 197 Pfam PF02545 Maf-like protein 4 184 5.7E-57 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YPO0387 a39f87350bd17e55b0bba932fe85a3ce 687 SUPERFAMILY SSF52540 227 530 6.85E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0387 a39f87350bd17e55b0bba932fe85a3ce 687 Gene3D G3DSA:3.40.50.300 224 278 1.9E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0387 a39f87350bd17e55b0bba932fe85a3ce 687 Gene3D G3DSA:3.40.50.300 439 529 1.9E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0387 a39f87350bd17e55b0bba932fe85a3ce 687 Pfam PF07728 AAA domain (dynein-related subfamily) 433 522 3.3E-9 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 YPO0387 a39f87350bd17e55b0bba932fe85a3ce 687 PANTHER PTHR37291 7 671 8.1E-124 T 22-04-2016 YPO0387 a39f87350bd17e55b0bba932fe85a3ce 687 SMART SM00382 227 532 1.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0387 a39f87350bd17e55b0bba932fe85a3ce 687 PANTHER PTHR37291:SF1 7 671 8.1E-124 T 22-04-2016 YPO1666 17f6243ba2d78451724c199526c330c4 723 Pfam PF01584 CheW-like domain 580 706 1.3E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPO1666 17f6243ba2d78451724c199526c330c4 723 Gene3D G3DSA:1.10.287.560 328 391 7.4E-23 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YPO1666 17f6243ba2d78451724c199526c330c4 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 494 1.8E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO1666 17f6243ba2d78451724c199526c330c4 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 553 1.8E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO1666 17f6243ba2d78451724c199526c330c4 723 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 572 1.8E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO1666 17f6243ba2d78451724c199526c330c4 723 Gene3D G3DSA:3.30.565.10 392 574 2.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1666 17f6243ba2d78451724c199526c330c4 723 SMART SM00260 567 707 8.8E-42 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPO1666 17f6243ba2d78451724c199526c330c4 723 SMART SM00073 5 102 2.7E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO1666 17f6243ba2d78451724c199526c330c4 723 SMART SM00387 435 575 2.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1666 17f6243ba2d78451724c199526c330c4 723 Gene3D G3DSA:3.30.70.400 179 246 1.8E-29 T 22-04-2016 IPR015162 CheY binding YPO1666 17f6243ba2d78451724c199526c330c4 723 Pfam PF01627 Hpt domain 9 104 2.2E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO1666 17f6243ba2d78451724c199526c330c4 723 Gene3D G3DSA:2.40.50.180 599 662 3.2E-13 T 22-04-2016 YPO1666 17f6243ba2d78451724c199526c330c4 723 SUPERFAMILY SSF55874 393 573 3.27E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1666 17f6243ba2d78451724c199526c330c4 723 SUPERFAMILY SSF47226 7 126 1.7E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO1666 17f6243ba2d78451724c199526c330c4 723 Gene3D G3DSA:1.20.120.160 3 141 2.1E-38 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO1666 17f6243ba2d78451724c199526c330c4 723 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 328 390 9.0E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YPO1666 17f6243ba2d78451724c199526c330c4 723 PANTHER PTHR22617:SF20 1 722 0.0 T 22-04-2016 YPO1666 17f6243ba2d78451724c199526c330c4 723 Gene3D G3DSA:2.30.30.40 575 596 1.4E-24 T 22-04-2016 YPO1666 17f6243ba2d78451724c199526c330c4 723 Gene3D G3DSA:2.30.30.40 663 706 1.4E-24 T 22-04-2016 YPO1666 17f6243ba2d78451724c199526c330c4 723 SUPERFAMILY SSF47384 328 391 3.06E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO1666 17f6243ba2d78451724c199526c330c4 723 SUPERFAMILY SSF50341 574 706 9.81E-31 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YPO1666 17f6243ba2d78451724c199526c330c4 723 SMART SM01231 327 390 2.0E-20 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YPO1666 17f6243ba2d78451724c199526c330c4 723 PANTHER PTHR22617 1 722 0.0 T 22-04-2016 YPO1666 17f6243ba2d78451724c199526c330c4 723 Pfam PF09078 CheY binding 183 245 1.1E-23 T 22-04-2016 IPR015162 CheY binding YPO1666 17f6243ba2d78451724c199526c330c4 723 SUPERFAMILY SSF55052 182 245 2.62E-19 T 22-04-2016 IPR015162 CheY binding YPO1666 17f6243ba2d78451724c199526c330c4 723 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 574 5.0E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1535 8dbcade8dfeaf70d451bda3e212e61b0 346 Pfam PF01032 FecCD transport family 23 334 5.5E-77 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO1535 8dbcade8dfeaf70d451bda3e212e61b0 346 PANTHER PTHR30472 3 342 3.3E-180 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO1535 8dbcade8dfeaf70d451bda3e212e61b0 346 SUPERFAMILY SSF81345 6 331 1.27E-69 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO1535 8dbcade8dfeaf70d451bda3e212e61b0 346 Gene3D G3DSA:1.10.3470.10 7 337 1.2E-86 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO1535 8dbcade8dfeaf70d451bda3e212e61b0 346 PANTHER PTHR30472:SF31 3 342 3.3E-180 T 22-04-2016 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 229 1.5E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 21 229 5.7E-65 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 SUPERFAMILY SSF88946 19 91 1.57E-17 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 Pfam PF04539 Sigma-70 region 3 100 142 1.1E-7 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 SUPERFAMILY SSF88659 156 230 6.17E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 Gene3D G3DSA:1.10.10.10 93 138 4.6E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 SUPERFAMILY SSF88659 93 153 1.13E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 Pfam PF04542 Sigma-70 region 2 22 92 7.9E-12 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 Pfam PF04545 Sigma-70, region 4 180 228 5.0E-13 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 PANTHER PTHR30385:SF7 1 228 6.7E-51 T 22-04-2016 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 PRINTS PR00046 Major sigma-70 factor signature 216 227 4.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 PRINTS PR00046 Major sigma-70 factor signature 184 196 4.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 PRINTS PR00046 Major sigma-70 factor signature 47 60 4.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 PRINTS PR00046 Major sigma-70 factor signature 201 216 4.5E-7 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 Gene3D G3DSA:1.10.10.10 175 229 1.8E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0745 2a54a15b102f3d0fb314ec5ae37d7b15 231 PANTHER PTHR30385 1 228 6.7E-51 T 22-04-2016 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PANTHER PTHR11406 1 387 2.6E-205 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.332 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PIRSF PIRSF000724 1 387 2.9E-133 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 SUPERFAMILY SSF53748 3 383 1.18E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 Pfam PF00162 Phosphoglycerate kinase 6 373 1.7E-138 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 Gene3D G3DSA:3.40.50.1260 5 174 1.1E-65 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO0921 2ae67bd6e19726b980a4684d810e7b8b 387 Gene3D G3DSA:3.40.50.1270 175 371 4.0E-80 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YPO3751 1f1e2715f761021b0e104791c4b68765 142 Gene3D G3DSA:3.30.1550.10 2 72 5.0E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal YPO3751 1f1e2715f761021b0e104791c4b68765 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 8.8E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YPO3751 1f1e2715f761021b0e104791c4b68765 142 SMART SM00649 9 141 1.3E-82 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YPO3751 1f1e2715f761021b0e104791c4b68765 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 22-04-2016 YPO3751 1f1e2715f761021b0e104791c4b68765 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.272 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YPO3751 1f1e2715f761021b0e104791c4b68765 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 9.5E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 YPO3751 1f1e2715f761021b0e104791c4b68765 142 Gene3D G3DSA:1.10.10.250 73 141 3.3E-30 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YPO3751 1f1e2715f761021b0e104791c4b68765 142 PANTHER PTHR11661 1 142 1.2E-74 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YPO3751 1f1e2715f761021b0e104791c4b68765 142 SUPERFAMILY SSF46906 68 141 3.53E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YPO3751 1f1e2715f761021b0e104791c4b68765 142 SUPERFAMILY SSF54747 3 73 2.49E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal YPO3751 1f1e2715f761021b0e104791c4b68765 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.7E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal YPO3751 1f1e2715f761021b0e104791c4b68765 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF54849 137 203 4.81E-24 T 22-04-2016 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF52029 185 376 8.02E-82 T 22-04-2016 IPR027409 GroEL-like apical domain YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 5.0E-255 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.476 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 Gene3D G3DSA:1.10.560.10 3 188 4.4E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF48592 406 521 1.91E-77 T 22-04-2016 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 SUPERFAMILY SSF48592 7 134 1.91E-77 T 22-04-2016 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 6.6E-93 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 Gene3D G3DSA:3.50.7.10 189 368 6.9E-98 T 22-04-2016 IPR027409 GroEL-like apical domain YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 PANTHER PTHR11353 2 548 5.1E-259 T 22-04-2016 YPO0351 c31487beecc4cf7dbb48bd96810885fd 548 Gene3D G3DSA:1.10.560.10 369 518 1.1E-38 T 22-04-2016 IPR027413 GroEL-like equatorial domain YPO2295 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2295 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2295 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2295 036b47275796147511be6ae9130d2852 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2295 036b47275796147511be6ae9130d2852 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 7.2E-20 T 22-04-2016 IPR023214 HAD-like domain YPO2295 036b47275796147511be6ae9130d2852 224 PANTHER PTHR12725 1 222 2.5E-51 T 22-04-2016 YPO2295 036b47275796147511be6ae9130d2852 224 SUPERFAMILY SSF56784 2 222 3.01E-47 T 22-04-2016 IPR023214 HAD-like domain YPO2295 036b47275796147511be6ae9130d2852 224 Gene3D G3DSA:3.40.50.1000 93 222 5.8E-41 T 22-04-2016 IPR023214 HAD-like domain YPO2295 036b47275796147511be6ae9130d2852 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 220 1.2E-74 T 22-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 YPO2295 036b47275796147511be6ae9130d2852 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 54 195 1.3E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2295 036b47275796147511be6ae9130d2852 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 2.5E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2295 036b47275796147511be6ae9130d2852 224 Gene3D G3DSA:1.10.150.240 15 92 2.7E-21 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO2295 036b47275796147511be6ae9130d2852 224 PANTHER PTHR12725:SF57 1 222 2.5E-51 T 22-04-2016 YPO1912 79913561607635faf2461c050697dc80 319 SUPERFAMILY SSF46689 270 317 1.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1912 79913561607635faf2461c050697dc80 319 Gene3D G3DSA:1.10.10.60 270 317 5.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1912 79913561607635faf2461c050697dc80 319 PANTHER PTHR11019:SF61 10 319 1.3E-109 T 22-04-2016 YPO1912 79913561607635faf2461c050697dc80 319 PANTHER PTHR11019 10 319 1.3E-109 T 22-04-2016 YPO1912 79913561607635faf2461c050697dc80 319 SMART SM00342 233 316 2.3E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO1912 79913561607635faf2461c050697dc80 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPO1912 79913561607635faf2461c050697dc80 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO1912 79913561607635faf2461c050697dc80 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO1912 79913561607635faf2461c050697dc80 319 Pfam PF12833 Helix-turn-helix domain 239 317 1.7E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO3553 b118e05bf0ab8cbbd1633aa939a231e9 217 PIRSF PIRSF006320 1 216 1.2E-99 T 22-04-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 YPO3553 b118e05bf0ab8cbbd1633aa939a231e9 217 SUPERFAMILY SSF52317 1 215 5.73E-60 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO3553 b118e05bf0ab8cbbd1633aa939a231e9 217 Gene3D G3DSA:3.40.50.880 1 216 1.4E-97 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO3553 b118e05bf0ab8cbbd1633aa939a231e9 217 PANTHER PTHR10224 1 217 3.0E-128 T 22-04-2016 YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.0E-148 T 22-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 1.7E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 PANTHER PTHR30146:SF25 1 336 1.4E-231 T 22-04-2016 YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 304 5.3E-14 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 Gene3D G3DSA:3.40.50.2300 173 330 1.0E-33 T 22-04-2016 YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 PANTHER PTHR30146 1 336 1.4E-231 T 22-04-2016 YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 SUPERFAMILY SSF53822 60 314 9.23E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 Gene3D G3DSA:1.10.260.40 1 55 2.4E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 Gene3D G3DSA:3.40.50.2300 56 172 1.0E-31 T 22-04-2016 YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 SUPERFAMILY SSF47413 2 58 2.38E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0543 70270a9c734e0d2e1afcd92fcc665982 336 SMART SM00354 1 73 2.9E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2992 c2e9418e9419506b0df42d604cb91c23 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 6.2E-136 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YPO2992 c2e9418e9419506b0df42d604cb91c23 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 2.7E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO2992 c2e9418e9419506b0df42d604cb91c23 322 SUPERFAMILY SSF53686 4 309 1.57E-97 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO2992 c2e9418e9419506b0df42d604cb91c23 322 Gene3D G3DSA:3.40.50.1100 133 313 1.6E-74 T 22-04-2016 YPO2992 c2e9418e9419506b0df42d604cb91c23 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YPO2992 c2e9418e9419506b0df42d604cb91c23 322 PANTHER PTHR10314:SF110 3 319 2.4E-159 T 22-04-2016 YPO2992 c2e9418e9419506b0df42d604cb91c23 322 Gene3D G3DSA:3.40.50.1100 36 132 7.2E-38 T 22-04-2016 YPO2992 c2e9418e9419506b0df42d604cb91c23 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 3.1E-143 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YPO2992 c2e9418e9419506b0df42d604cb91c23 322 PANTHER PTHR10314 3 319 2.4E-159 T 22-04-2016 YPO3658 20e0a350306575ae2db63151ff35eccd 449 SUPERFAMILY SSF52440 1 113 3.74E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO3658 20e0a350306575ae2db63151ff35eccd 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain YPO3658 20e0a350306575ae2db63151ff35eccd 449 SMART SM00878 336 441 3.2E-65 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal YPO3658 20e0a350306575ae2db63151ff35eccd 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPO3658 20e0a350306575ae2db63151ff35eccd 449 Gene3D G3DSA:3.40.50.20 1 129 3.6E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO3658 20e0a350306575ae2db63151ff35eccd 449 Gene3D G3DSA:3.30.470.20 204 444 1.3E-99 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO3658 20e0a350306575ae2db63151ff35eccd 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPO3658 20e0a350306575ae2db63151ff35eccd 449 SUPERFAMILY SSF56059 83 347 5.05E-69 T 22-04-2016 YPO3658 20e0a350306575ae2db63151ff35eccd 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.2E-38 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal YPO3658 20e0a350306575ae2db63151ff35eccd 449 Gene3D G3DSA:3.30.1490.20 130 203 2.4E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO3658 20e0a350306575ae2db63151ff35eccd 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 9.0E-85 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YPO3658 20e0a350306575ae2db63151ff35eccd 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 4.2E-249 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 YPO3658 20e0a350306575ae2db63151ff35eccd 449 SUPERFAMILY SSF51246 331 444 1.31E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif YPO3658 20e0a350306575ae2db63151ff35eccd 449 PANTHER PTHR18866 1 442 0.0 T 22-04-2016 YPO1334 3c869e0788269527870c537168329e92 281 PANTHER PTHR30222:SF1 8 274 4.0E-88 T 22-04-2016 YPO1334 3c869e0788269527870c537168329e92 281 Gene3D G3DSA:1.10.3720.10 11 270 4.2E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1334 3c869e0788269527870c537168329e92 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 268 6.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1334 3c869e0788269527870c537168329e92 281 SUPERFAMILY SSF161098 8 266 7.48E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1334 3c869e0788269527870c537168329e92 281 PANTHER PTHR30222 8 274 4.0E-88 T 22-04-2016 YPO2093 64fc9be5f5ac632ab262e03078326702 187 SMART SM01040 11 108 1.4E-21 T 22-04-2016 IPR003497 BRO N-terminal domain YPO2093 64fc9be5f5ac632ab262e03078326702 187 Pfam PF02498 BRO family, N-terminal domain 15 104 2.5E-9 T 22-04-2016 IPR003497 BRO N-terminal domain YPO3074 a48298f45699905d85ede1289c3be480 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YPO3074 a48298f45699905d85ede1289c3be480 164 Gene3D G3DSA:2.40.100.10 2 162 4.5E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain YPO3074 a48298f45699905d85ede1289c3be480 164 PIRSF PIRSF001467 1 164 2.8E-29 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 YPO3074 a48298f45699905d85ede1289c3be480 164 PANTHER PTHR11071 1 164 1.6E-84 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 YPO3074 a48298f45699905d85ede1289c3be480 164 PANTHER PTHR11071:SF192 1 164 1.6E-84 T 22-04-2016 YPO3074 a48298f45699905d85ede1289c3be480 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.1E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPO3074 a48298f45699905d85ede1289c3be480 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.1E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPO3074 a48298f45699905d85ede1289c3be480 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.1E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPO3074 a48298f45699905d85ede1289c3be480 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 2.9E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPO3074 a48298f45699905d85ede1289c3be480 164 SUPERFAMILY SSF50891 1 162 2.48E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain YPO1433 28affa95fe6763a3c9309a5ea3ef7699 151 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 2.1E-75 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YPO1433 28affa95fe6763a3c9309a5ea3ef7699 151 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 5.0E-72 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YPO1433 28affa95fe6763a3c9309a5ea3ef7699 151 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.63 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YPO0230 4d06cdcbdaa96a508fb6a347610bdc61 38 SUPERFAMILY SSF57840 1 38 5.49E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0230 4d06cdcbdaa96a508fb6a347610bdc61 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0230 4d06cdcbdaa96a508fb6a347610bdc61 38 PANTHER PTHR18804 1 38 4.0E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0230 4d06cdcbdaa96a508fb6a347610bdc61 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 4.7E-22 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0230 4d06cdcbdaa96a508fb6a347610bdc61 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 22-04-2016 YPO0230 4d06cdcbdaa96a508fb6a347610bdc61 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.971 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0230 4d06cdcbdaa96a508fb6a347610bdc61 38 Pfam PF00444 Ribosomal protein L36 1 38 1.6E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3965 02a4c026d0c16079ff47776419c122bc 851 SMART SM00387 600 718 2.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3965 02a4c026d0c16079ff47776419c122bc 851 Pfam PF12860 PAS fold 386 486 1.7E-9 T 22-04-2016 YPO3965 02a4c026d0c16079ff47776419c122bc 851 PANTHER PTHR24423:SF544 376 851 3.7E-192 T 22-04-2016 YPO3965 02a4c026d0c16079ff47776419c122bc 851 PANTHER PTHR24423:SF544 35 60 3.7E-192 T 22-04-2016 YPO3965 02a4c026d0c16079ff47776419c122bc 851 Gene3D G3DSA:3.30.450.20 370 482 7.4E-10 T 22-04-2016 YPO3965 02a4c026d0c16079ff47776419c122bc 851 Pfam PF00072 Response regulator receiver domain 740 848 1.3E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3965 02a4c026d0c16079ff47776419c122bc 851 Pfam PF00672 HAMP domain 297 362 6.4E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO3965 02a4c026d0c16079ff47776419c122bc 851 SMART SM00304 315 368 5.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO3965 02a4c026d0c16079ff47776419c122bc 851 SMART SM00388 497 559 1.1E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3965 02a4c026d0c16079ff47776419c122bc 851 SUPERFAMILY SSF55785 367 471 3.24E-7 T 22-04-2016 IPR000014 PAS domain YPO3965 02a4c026d0c16079ff47776419c122bc 851 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 716 3.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3965 02a4c026d0c16079ff47776419c122bc 851 SUPERFAMILY SSF158472 321 363 1.44E-7 T 22-04-2016 YPO3965 02a4c026d0c16079ff47776419c122bc 851 SMART SM00448 738 848 2.0E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3965 02a4c026d0c16079ff47776419c122bc 851 Gene3D G3DSA:3.30.565.10 563 716 7.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3965 02a4c026d0c16079ff47776419c122bc 851 SUPERFAMILY SSF55874 550 718 4.06E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3965 02a4c026d0c16079ff47776419c122bc 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 675 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3965 02a4c026d0c16079ff47776419c122bc 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 715 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3965 02a4c026d0c16079ff47776419c122bc 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 661 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3965 02a4c026d0c16079ff47776419c122bc 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 696 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3965 02a4c026d0c16079ff47776419c122bc 851 PANTHER PTHR24423 376 851 3.7E-192 T 22-04-2016 YPO3965 02a4c026d0c16079ff47776419c122bc 851 PANTHER PTHR24423 35 60 3.7E-192 T 22-04-2016 YPO3965 02a4c026d0c16079ff47776419c122bc 851 Gene3D G3DSA:3.40.50.2300 736 851 4.4E-24 T 22-04-2016 YPO3965 02a4c026d0c16079ff47776419c122bc 851 Pfam PF00512 His Kinase A (phospho-acceptor) domain 498 558 6.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3965 02a4c026d0c16079ff47776419c122bc 851 SUPERFAMILY SSF52172 739 851 1.18E-20 T 22-04-2016 IPR011006 CheY-like superfamily YPO3965 02a4c026d0c16079ff47776419c122bc 851 SUPERFAMILY SSF47384 492 557 2.55E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2255 9768fb0c2de135cb610f4500e2df4c6e 327 PANTHER PTHR30036:SF1 1 326 6.2E-114 T 22-04-2016 YPO2255 9768fb0c2de135cb610f4500e2df4c6e 327 Gene3D G3DSA:3.40.50.2300 25 147 6.9E-42 T 22-04-2016 YPO2255 9768fb0c2de135cb610f4500e2df4c6e 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 1.2E-85 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO2255 9768fb0c2de135cb610f4500e2df4c6e 327 SUPERFAMILY SSF53822 26 324 2.88E-67 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO2255 9768fb0c2de135cb610f4500e2df4c6e 327 PANTHER PTHR30036 1 326 6.2E-114 T 22-04-2016 YPO2255 9768fb0c2de135cb610f4500e2df4c6e 327 Gene3D G3DSA:3.40.50.2300 148 296 1.3E-50 T 22-04-2016 YPO2255 9768fb0c2de135cb610f4500e2df4c6e 327 PIRSF PIRSF002816 2 326 3.0E-149 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 YPO3231 7fdf648ad708fd762c6f686714146aad 352 Gene3D G3DSA:3.30.70.270 66 164 1.7E-34 T 22-04-2016 YPO3231 7fdf648ad708fd762c6f686714146aad 352 PANTHER PTHR11076 1 347 2.4E-228 T 22-04-2016 YPO3231 7fdf648ad708fd762c6f686714146aad 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.433 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO3231 7fdf648ad708fd762c6f686714146aad 352 SUPERFAMILY SSF100879 241 350 1.35E-26 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO3231 7fdf648ad708fd762c6f686714146aad 352 PANTHER PTHR11076:SF32 1 347 2.4E-228 T 22-04-2016 YPO3231 7fdf648ad708fd762c6f686714146aad 352 Gene3D G3DSA:1.10.150.20 165 237 2.2E-26 T 22-04-2016 YPO3231 7fdf648ad708fd762c6f686714146aad 352 SUPERFAMILY SSF56672 1 234 2.76E-92 T 22-04-2016 YPO3231 7fdf648ad708fd762c6f686714146aad 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 342 5.8E-9 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO3231 7fdf648ad708fd762c6f686714146aad 352 Pfam PF11798 IMS family HHH motif 169 197 5.6E-8 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO3231 7fdf648ad708fd762c6f686714146aad 352 Gene3D G3DSA:3.30.1490.100 238 350 1.5E-41 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO3231 7fdf648ad708fd762c6f686714146aad 352 Pfam PF00817 impB/mucB/samB family 7 154 2.3E-48 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO1178 c1a6b9b3c5c944f23121d91f496bf76a 179 Gene3D G3DSA:2.40.320.10 9 177 8.0E-38 T 22-04-2016 IPR023577 CYTH domain YPO1178 c1a6b9b3c5c944f23121d91f496bf76a 179 SUPERFAMILY SSF55154 8 177 2.29E-38 T 22-04-2016 IPR033469 CYTH-like domain YPO1178 c1a6b9b3c5c944f23121d91f496bf76a 179 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 10 178 7.9E-17 T 22-04-2016 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 YPO1178 c1a6b9b3c5c944f23121d91f496bf76a 179 SMART SM01118 8 179 7.2E-15 T 22-04-2016 IPR023577 CYTH domain YPO1178 c1a6b9b3c5c944f23121d91f496bf76a 179 Pfam PF01928 CYTH domain 9 173 8.8E-23 T 22-04-2016 IPR023577 CYTH domain YPO1178 c1a6b9b3c5c944f23121d91f496bf76a 179 PANTHER PTHR21028:SF2 2 177 1.9E-50 T 22-04-2016 YPO1178 c1a6b9b3c5c944f23121d91f496bf76a 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 9 149 1.0E-8 T 22-04-2016 YPO1178 c1a6b9b3c5c944f23121d91f496bf76a 179 PANTHER PTHR21028 2 177 1.9E-50 T 22-04-2016 YPO2930 f60955457479d11cf1eaf8cca5bedab0 243 SUPERFAMILY SSF63892 4 242 3.27E-100 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YPO2930 f60955457479d11cf1eaf8cca5bedab0 243 PANTHER PTHR30456:SF0 2 243 1.3E-149 T 22-04-2016 YPO2930 f60955457479d11cf1eaf8cca5bedab0 243 Gene3D G3DSA:3.20.20.70 4 242 5.5E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2930 f60955457479d11cf1eaf8cca5bedab0 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.374 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YPO2930 f60955457479d11cf1eaf8cca5bedab0 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 3.2E-104 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YPO2930 f60955457479d11cf1eaf8cca5bedab0 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.8E-102 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YPO2930 f60955457479d11cf1eaf8cca5bedab0 243 PANTHER PTHR30456 2 243 1.3E-149 T 22-04-2016 YPO1022 34c42364b2d6391d564660ffbf0c0294 441 PANTHER PTHR30602 1 441 0.0 T 22-04-2016 YPO1022 34c42364b2d6391d564660ffbf0c0294 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 2.6E-201 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 YPO1022 34c42364b2d6391d564660ffbf0c0294 441 PIRSF PIRSF000423 1 441 2.9E-211 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 YPO1022 34c42364b2d6391d564660ffbf0c0294 441 SUPERFAMILY SSF55729 296 418 2.96E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1022 34c42364b2d6391d564660ffbf0c0294 441 PANTHER PTHR30602:SF3 1 441 0.0 T 22-04-2016 YPO1022 34c42364b2d6391d564660ffbf0c0294 441 Pfam PF00696 Amino acid kinase family 25 266 1.8E-31 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO1022 34c42364b2d6391d564660ffbf0c0294 441 Gene3D G3DSA:3.40.1160.10 23 290 1.7E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO1022 34c42364b2d6391d564660ffbf0c0294 441 SUPERFAMILY SSF53633 4 290 4.19E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO1022 34c42364b2d6391d564660ffbf0c0294 441 Pfam PF00583 Acetyltransferase (GNAT) family 345 413 1.2E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO1022 34c42364b2d6391d564660ffbf0c0294 441 Gene3D G3DSA:3.40.630.30 293 438 8.2E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1022 34c42364b2d6391d564660ffbf0c0294 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 240.354 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 YPO1839 ff51cca603efcb0d5a526241f226108c 120 Gene3D G3DSA:1.20.58.380 5 93 3.2E-27 T 22-04-2016 YPO1839 ff51cca603efcb0d5a526241f226108c 120 Pfam PF05400 Flagellar protein FliT 21 106 4.8E-20 T 22-04-2016 IPR008622 Flagellar protein FliT YPO1839 ff51cca603efcb0d5a526241f226108c 120 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 120 25.801 T 22-04-2016 IPR008622 Flagellar protein FliT YPO1689 13f29385582a9f010a067b631c8915da 418 SUPERFAMILY SSF52151 86 271 2.09E-32 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPO1689 13f29385582a9f010a067b631c8915da 418 Pfam PF01734 Patatin-like phospholipase 86 271 3.1E-24 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 YPO1689 13f29385582a9f010a067b631c8915da 418 Gene3D G3DSA:3.40.1090.10 86 271 3.0E-17 T 22-04-2016 YPO0736 632b0d27ea53e34a56296a0980fc585d 348 Gene3D G3DSA:1.10.10.10 18 111 7.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0736 632b0d27ea53e34a56296a0980fc585d 348 SMART SM00862 34 109 1.3E-8 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0736 632b0d27ea53e34a56296a0980fc585d 348 PANTHER PTHR26402 220 347 4.1E-25 T 22-04-2016 YPO0736 632b0d27ea53e34a56296a0980fc585d 348 PANTHER PTHR26402 10 124 4.1E-25 T 22-04-2016 YPO0736 632b0d27ea53e34a56296a0980fc585d 348 SUPERFAMILY SSF46894 15 109 1.76E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO0736 632b0d27ea53e34a56296a0980fc585d 348 Pfam PF00486 Transcriptional regulatory protein, C terminal 37 109 2.1E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0736 632b0d27ea53e34a56296a0980fc585d 348 PANTHER PTHR26402:SF531 220 347 4.1E-25 T 22-04-2016 YPO0736 632b0d27ea53e34a56296a0980fc585d 348 PANTHER PTHR26402:SF531 10 124 4.1E-25 T 22-04-2016 YPO2463 4f2eb75c46d89f1bb322ee26d10dd611 334 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 7 333 7.3E-153 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 YPO2463 4f2eb75c46d89f1bb322ee26d10dd611 334 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 8 330 2.6E-149 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 SUPERFAMILY SSF52518 59 469 5.16E-144 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3419 1cf5b56431816599dd127d7942db9f2e 887 SUPERFAMILY SSF52922 702 885 2.17E-62 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624 787 869 0.0 T 22-04-2016 IPR033247 Transketolase family YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624 472 535 0.0 T 22-04-2016 IPR033247 Transketolase family YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624 363 450 0.0 T 22-04-2016 IPR033247 Transketolase family YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624 553 768 0.0 T 22-04-2016 IPR033247 Transketolase family YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624 75 294 0.0 T 22-04-2016 IPR033247 Transketolase family YPO3419 1cf5b56431816599dd127d7942db9f2e 887 Gene3D G3DSA:3.40.50.920 707 885 8.7E-76 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 Gene3D G3DSA:3.40.50.970 473 705 2.3E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3419 1cf5b56431816599dd127d7942db9f2e 887 SUPERFAMILY SSF52518 474 701 1.3E-99 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3419 1cf5b56431816599dd127d7942db9f2e 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 362 450 1.9E-5 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 109 294 2.6E-8 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 Gene3D G3DSA:3.40.50.970 59 469 1.5E-156 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624:SF67 787 869 0.0 T 22-04-2016 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624:SF67 472 535 0.0 T 22-04-2016 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624:SF67 363 450 0.0 T 22-04-2016 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624:SF67 553 768 0.0 T 22-04-2016 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PANTHER PTHR11624:SF67 75 294 0.0 T 22-04-2016 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 YPO3419 1cf5b56431816599dd127d7942db9f2e 887 PIRSF PIRSF000156 1 887 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 YPO3071 97876bae930b3cae14600e6c0d4ea492 239 PANTHER PTHR30050 10 238 1.1E-123 T 22-04-2016 YPO3071 97876bae930b3cae14600e6c0d4ea492 239 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 12 237 8.2E-85 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 YPO3071 97876bae930b3cae14600e6c0d4ea492 239 SUPERFAMILY SSF52540 24 217 1.33E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3071 97876bae930b3cae14600e6c0d4ea492 239 PANTHER PTHR30050:SF5 10 238 1.1E-123 T 22-04-2016 YPO3071 97876bae930b3cae14600e6c0d4ea492 239 Gene3D G3DSA:3.40.50.300 8 170 9.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3071 97876bae930b3cae14600e6c0d4ea492 239 Gene3D G3DSA:1.10.8.60 173 238 1.3E-30 T 22-04-2016 YPO3071 97876bae930b3cae14600e6c0d4ea492 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 49 69 1.3E-6 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPO3071 97876bae930b3cae14600e6c0d4ea492 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 164 1.3E-6 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YPO3071 97876bae930b3cae14600e6c0d4ea492 239 Pfam PF00308 Bacterial dnaA protein 22 218 1.6E-17 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA YPO3071 97876bae930b3cae14600e6c0d4ea492 239 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 11 239 58.653 T 22-04-2016 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 Pfam PF01541 GIY-YIG catalytic domain 25 100 2.4E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 PANTHER PTHR30562:SF1 1 615 0.0 T 22-04-2016 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 SMART SM00465 24 105 1.0E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 Gene3D G3DSA:4.10.860.10 190 250 1.3E-20 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 15 596 1.4E-227 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 Pfam PF14520 Helix-hairpin-helix domain 565 616 5.1E-8 T 22-04-2016 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 SMART SM00278 595 614 0.12 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 SMART SM00278 563 582 34.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 SUPERFAMILY SSF47781 528 616 1.05E-17 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 Gene3D G3DSA:3.40.1440.10 24 104 6.3E-12 T 22-04-2016 IPR027299 GIY-YIG domain YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 SUPERFAMILY SSF82771 24 107 1.1E-24 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 Pfam PF02151 UvrB/uvrC motif 212 244 2.1E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 Gene3D G3DSA:1.10.150.20 562 616 4.0E-22 T 22-04-2016 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 PANTHER PTHR30562 1 615 0.0 T 22-04-2016 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 392 549 6.5E-45 T 22-04-2016 IPR001162 UvrC family homology region YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 Hamap MF_00203 UvrABC system protein C [uvrC]. 11 614 30.078 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 YPO1866 c26ed003e7c697eac8c476b36cfc6ab1 617 SUPERFAMILY SSF46600 198 250 4.18E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPO2055 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:3.30.70.980 135 205 4.8E-25 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 YPO2055 db09a41db33003d05024a6b86ffa7074 247 PANTHER PTHR12532 1 241 3.1E-118 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YPO2055 db09a41db33003d05024a6b86ffa7074 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.727 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YPO2055 db09a41db33003d05024a6b86ffa7074 247 SUPERFAMILY SSF75625 3 245 1.83E-94 T 22-04-2016 IPR029072 YebC-like YPO2055 db09a41db33003d05024a6b86ffa7074 247 Pfam PF01709 Transcriptional regulator 5 236 8.7E-90 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YPO2055 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:3.30.1270.10 212 246 7.5E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 YPO2055 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:3.30.1270.10 82 134 7.5E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 YPO2055 db09a41db33003d05024a6b86ffa7074 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.2E-103 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YPO2055 db09a41db33003d05024a6b86ffa7074 247 Gene3D G3DSA:1.10.10.200 1 80 1.3E-34 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like YPO1233 5527cd9e162f682bb0dc093cc3a7faf1 240 SUPERFAMILY SSF47413 1 92 2.65E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO1233 5527cd9e162f682bb0dc093cc3a7faf1 240 SUPERFAMILY SSF51306 109 233 1.12E-26 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YPO1233 5527cd9e162f682bb0dc093cc3a7faf1 240 Gene3D G3DSA:2.10.109.10 144 235 5.0E-31 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YPO1233 5527cd9e162f682bb0dc093cc3a7faf1 240 Pfam PF01381 Helix-turn-helix 25 73 3.6E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO1233 5527cd9e162f682bb0dc093cc3a7faf1 240 PANTHER PTHR33516 2 232 8.7E-125 T 22-04-2016 YPO1233 5527cd9e162f682bb0dc093cc3a7faf1 240 SMART SM00530 16 75 3.4E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO1233 5527cd9e162f682bb0dc093cc3a7faf1 240 Gene3D G3DSA:1.10.260.40 5 83 8.5E-32 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO1233 5527cd9e162f682bb0dc093cc3a7faf1 240 Pfam PF00717 Peptidase S24-like 152 223 8.9E-14 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YPO1233 5527cd9e162f682bb0dc093cc3a7faf1 240 PANTHER PTHR33516:SF3 2 232 8.7E-125 T 22-04-2016 YPO0854 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 Gene3D G3DSA:1.10.3720.10 8 270 4.2E-64 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0854 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 SUPERFAMILY SSF161098 10 283 3.18E-68 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0854 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 PANTHER PTHR32243:SF34 5 283 1.8E-167 T 22-04-2016 YPO0854 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 276 3.7E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0854 c4e323c10d60c5cfe9e74ceb6b84f0f2 283 PANTHER PTHR32243 5 283 1.8E-167 T 22-04-2016 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 Gene3D G3DSA:1.10.150.20 422 489 1.8E-7 T 22-04-2016 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 PANTHER PTHR23389:SF7 1 529 0.0 T 22-04-2016 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 SUPERFAMILY SSF47781 397 562 5.34E-32 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 Gene3D G3DSA:3.30.470.30 136 253 5.1E-18 T 22-04-2016 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 SMART SM00532 36 435 3.4E-42 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 125 315 6.7E-18 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 320 394 1.7E-14 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 SUPERFAMILY SSF50249 317 397 4.28E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 SUPERFAMILY SSF56091 32 314 7.34E-68 T 22-04-2016 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 Hamap MF_01587 DNA ligase B [ligB]. 5 563 54.067 T 22-04-2016 IPR020923 DNA ligase B GO:0003911|GO:0006259 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 Gene3D G3DSA:2.40.50.140 318 389 1.3E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 Gene3D G3DSA:1.10.287.610 37 76 1.4E-5 T 22-04-2016 YPO0041 2ac2bab274a8c6ea6035a922ebf2f58f 567 PANTHER PTHR23389 1 529 0.0 T 22-04-2016 YPO2589 90241b120da54819515b91f49296cb16 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 1.0E-10 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YPO2589 90241b120da54819515b91f49296cb16 95 PANTHER PTHR33336 1 94 2.0E-33 T 22-04-2016 YPO2589 90241b120da54819515b91f49296cb16 95 Gene3D G3DSA:3.30.70.900 1 93 4.8E-26 T 22-04-2016 YPO2589 90241b120da54819515b91f49296cb16 95 SUPERFAMILY SSF54909 1 90 9.08E-25 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO2589 90241b120da54819515b91f49296cb16 95 PANTHER PTHR33336:SF3 1 94 2.0E-33 T 22-04-2016 YPO3727 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 5.4E-157 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPO3727 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-149 T 22-04-2016 YPO3727 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.2E-131 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPO3727 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 PANTHER PTHR20919:SF0 2 309 1.2E-165 T 22-04-2016 YPO3727 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 51.887 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPO3727 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 PANTHER PTHR20919 2 309 1.2E-165 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPO3727 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 SUPERFAMILY SSF52317 17 297 3.82E-100 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO3727 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 PIRSF PIRSF000450 1 308 1.5E-146 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YPO3727 428ebe5eb0b0a81c8f9d92bf0f1f8cc6 309 Gene3D G3DSA:3.40.50.880 34 301 6.9E-119 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO3964 2a6168dc9fcc9072061318edd1d46421 507 PANTHER PTHR24220:SF416 8 380 5.9E-202 T 22-04-2016 YPO3964 2a6168dc9fcc9072061318edd1d46421 507 SUPERFAMILY SSF52540 271 486 1.23E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3964 2a6168dc9fcc9072061318edd1d46421 507 SMART SM00382 280 485 4.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3964 2a6168dc9fcc9072061318edd1d46421 507 SMART SM00382 31 218 6.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3964 2a6168dc9fcc9072061318edd1d46421 507 PANTHER PTHR24220 8 380 5.9E-202 T 22-04-2016 YPO3964 2a6168dc9fcc9072061318edd1d46421 507 SUPERFAMILY SSF52540 5 224 5.74E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3964 2a6168dc9fcc9072061318edd1d46421 507 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3964 2a6168dc9fcc9072061318edd1d46421 507 Gene3D G3DSA:3.40.50.300 271 491 2.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3964 2a6168dc9fcc9072061318edd1d46421 507 Gene3D G3DSA:3.40.50.300 3 237 2.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3964 2a6168dc9fcc9072061318edd1d46421 507 Pfam PF00005 ABC transporter 272 425 3.4E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3964 2a6168dc9fcc9072061318edd1d46421 507 Pfam PF00005 ABC transporter 22 171 6.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3451 f521b1fba1dcb1ea7874e059c6da3535 278 SUPERFAMILY SSF161098 72 257 1.27E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3451 f521b1fba1dcb1ea7874e059c6da3535 278 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 53 1.5E-9 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO3451 f521b1fba1dcb1ea7874e059c6da3535 278 Gene3D G3DSA:1.10.3720.10 68 275 2.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3451 f521b1fba1dcb1ea7874e059c6da3535 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 275 1.2E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3451 f521b1fba1dcb1ea7874e059c6da3535 278 PANTHER PTHR30465 5 275 5.9E-97 T 22-04-2016 YPO3451 f521b1fba1dcb1ea7874e059c6da3535 278 PANTHER PTHR30465:SF10 5 275 5.9E-97 T 22-04-2016 YPO2555 182339c844190f52c3af613e4f0280c5 164 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.929 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 YPO2555 182339c844190f52c3af613e4f0280c5 164 PANTHER PTHR11058 1 127 6.0E-74 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 YPO2555 182339c844190f52c3af613e4f0280c5 164 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 3.1E-31 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 YPO2555 182339c844190f52c3af613e4f0280c5 164 PANTHER PTHR11058:SF5 1 127 6.0E-74 T 22-04-2016 YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 SMART SM00357 23 79 1.5E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 SMART SM00955 189 517 5.1E-124 T 22-04-2016 YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 1.7E-223 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 Pfam PF00575 S1 RNA binding domain 560 639 9.7E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 SUPERFAMILY SSF50249 560 643 4.05E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 PANTHER PTHR23355 21 643 0.0 T 22-04-2016 YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 SUPERFAMILY SSF50249 83 171 1.15E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 Pfam PF08206 Ribonuclease B OB domain 24 80 5.8E-19 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 SUPERFAMILY SSF50249 8 80 1.52E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 Gene3D G3DSA:2.40.50.140 564 639 2.6E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.17 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 SUPERFAMILY SSF50249 171 556 2.0E-115 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 Pfam PF00773 RNB domain 189 516 6.3E-86 T 22-04-2016 YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site YPO2235 ef26f87c2f8a0d314bb42692716ff761 644 PANTHER PTHR23355:SF37 21 643 0.0 T 22-04-2016 YPO3657 a4e495a6c887717aaa17175079f0043b 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 7.6E-242 T 22-04-2016 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 YPO3657 a4e495a6c887717aaa17175079f0043b 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 4.0E-107 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO3657 a4e495a6c887717aaa17175079f0043b 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPO3657 a4e495a6c887717aaa17175079f0043b 484 Pfam PF00474 Sodium:solute symporter family 36 432 6.7E-131 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO3657 a4e495a6c887717aaa17175079f0043b 484 PANTHER PTHR11819 2 477 2.0E-301 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO3657 a4e495a6c887717aaa17175079f0043b 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPO3657 a4e495a6c887717aaa17175079f0043b 484 PANTHER PTHR11819:SF125 2 477 2.0E-301 T 22-04-2016 YPO2534 340cddfcb3985388f14442e1baa0ea9d 171 PIRSF PIRSF008757 1 164 1.2E-61 T 22-04-2016 IPR010371 Uncharacterised protein family UPF0303 YPO2534 340cddfcb3985388f14442e1baa0ea9d 171 Hamap MF_00761 UPF0303 protein . 2 155 34.74 T 22-04-2016 IPR010371 Uncharacterised protein family UPF0303 YPO2534 340cddfcb3985388f14442e1baa0ea9d 171 Pfam PF03928 Haem-degrading 22 147 3.9E-26 T 22-04-2016 IPR005624 Haem-degrading YPO2534 340cddfcb3985388f14442e1baa0ea9d 171 SUPERFAMILY SSF143744 14 151 4.05E-23 T 22-04-2016 YPO2534 340cddfcb3985388f14442e1baa0ea9d 171 PANTHER PTHR28255 1 164 2.1E-56 T 22-04-2016 YPO2534 340cddfcb3985388f14442e1baa0ea9d 171 PANTHER PTHR28255:SF1 1 164 2.1E-56 T 22-04-2016 YPO3577 8e4a9cf338c7131989c37b30d926828b 328 PIRSF PIRSF004692 2 328 3.1E-135 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YPO3577 8e4a9cf338c7131989c37b30d926828b 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 2.0E-122 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YPO3577 8e4a9cf338c7131989c37b30d926828b 328 Pfam PF01380 SIS domain 46 177 2.2E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO3577 8e4a9cf338c7131989c37b30d926828b 328 SMART SM00116 215 263 1.2 T 22-04-2016 IPR000644 CBS domain YPO3577 8e4a9cf338c7131989c37b30d926828b 328 SMART SM00116 280 327 1.9 T 22-04-2016 IPR000644 CBS domain YPO3577 8e4a9cf338c7131989c37b30d926828b 328 PANTHER PTHR11911:SF90 180 325 1.0E-45 T 22-04-2016 YPO3577 8e4a9cf338c7131989c37b30d926828b 328 Gene3D G3DSA:3.10.580.10 197 325 1.9E-40 T 22-04-2016 YPO3577 8e4a9cf338c7131989c37b30d926828b 328 Gene3D G3DSA:3.40.50.10490 17 196 1.2E-50 T 22-04-2016 YPO3577 8e4a9cf338c7131989c37b30d926828b 328 PANTHER PTHR11911 180 325 1.0E-45 T 22-04-2016 YPO3577 8e4a9cf338c7131989c37b30d926828b 328 Pfam PF00571 CBS domain 274 325 1.6E-6 T 22-04-2016 IPR000644 CBS domain YPO3577 8e4a9cf338c7131989c37b30d926828b 328 Pfam PF00571 CBS domain 207 261 1.5E-7 T 22-04-2016 IPR000644 CBS domain YPO3577 8e4a9cf338c7131989c37b30d926828b 328 SUPERFAMILY SSF53697 14 325 1.74E-66 T 22-04-2016 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 SUPERFAMILY SSF51569 1 291 1.43E-100 T 22-04-2016 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 PANTHER PTHR10277:SF9 1 508 1.1E-269 T 22-04-2016 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 Gene3D G3DSA:3.20.20.70 1 347 9.2E-146 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 Pfam PF00682 HMGL-like 4 273 1.4E-105 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 43.408 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 7.1E-37 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 SMART SM00917 369 500 2.0E-38 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 PANTHER PTHR10277 1 508 1.1E-269 T 22-04-2016 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 7.0E-252 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPO0533 3bcf9ae13a6e102280e48b5b71576fa0 520 SUPERFAMILY SSF110921 392 499 6.67E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 PANTHER PTHR23135:SF3 16 454 2.5E-174 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 Pfam PF01225 Mur ligase family, catalytic domain 28 96 9.2E-13 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 SUPERFAMILY SSF63418 1 102 1.24E-27 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 Gene3D G3DSA:3.40.1390.10 1 85 1.2E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 SUPERFAMILY SSF53244 319 452 3.66E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 PANTHER PTHR23135 16 454 2.5E-174 T 22-04-2016 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 453 34.188 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 452 2.0E-139 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 397 6.9E-14 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 SUPERFAMILY SSF53623 105 316 3.92E-58 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 Gene3D G3DSA:3.40.1190.10 87 316 1.0E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 Gene3D G3DSA:3.90.190.20 319 455 3.3E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0551 d0743e8d7b865c0d989508cb6c9c7fc7 458 Pfam PF08245 Mur ligase middle domain 111 299 3.8E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 PANTHER PTHR11706:SF42 5 409 3.4E-255 T 22-04-2016 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 Pfam PF01566 Natural resistance-associated macrophage protein 38 382 2.7E-122 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 PANTHER PTHR11706 5 409 3.4E-255 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 2.86E-31 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 20 377 3.9E-98 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPO2982 0700a9a2b7f608871b538d01b258d7f5 409 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 36.303 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YPO3513 0f52e8618b3535b2e3ae528218afd421 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPO3513 0f52e8618b3535b2e3ae528218afd421 323 SUPERFAMILY SSF48576 6 322 4.46E-97 T 22-04-2016 IPR008949 Isoprenoid synthase domain YPO3513 0f52e8618b3535b2e3ae528218afd421 323 Pfam PF00348 Polyprenyl synthetase 32 262 1.0E-74 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPO3513 0f52e8618b3535b2e3ae528218afd421 323 PANTHER PTHR12001 6 323 4.3E-126 T 22-04-2016 IPR017446 Polyprenyl synthetase-related YPO3513 0f52e8618b3535b2e3ae528218afd421 323 PANTHER PTHR12001:SF47 6 323 4.3E-126 T 22-04-2016 YPO3513 0f52e8618b3535b2e3ae528218afd421 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPO3513 0f52e8618b3535b2e3ae528218afd421 323 Gene3D G3DSA:1.10.600.10 3 322 1.8E-100 T 22-04-2016 IPR008949 Isoprenoid synthase domain YPO3599 13523077d0064888f3f3842ffc6958a8 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 602 763 1.5E-37 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO3599 13523077d0064888f3f3842ffc6958a8 867 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 853 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPO3599 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:1.10.1780.10 12 146 1.6E-10 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO3599 13523077d0064888f3f3842ffc6958a8 867 SMART SM00382 217 362 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3599 13523077d0064888f3f3842ffc6958a8 867 SMART SM00382 603 751 2.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3599 13523077d0064888f3f3842ffc6958a8 867 SUPERFAMILY SSF52540 552 834 3.23E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3599 13523077d0064888f3f3842ffc6958a8 867 SMART SM01086 769 859 2.4E-4 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO3599 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:3.40.50.300 559 778 1.5E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3599 13523077d0064888f3f3842ffc6958a8 867 SUPERFAMILY SSF52540 180 551 5.89E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3599 13523077d0064888f3f3842ffc6958a8 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 333 8.6E-8 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO3599 13523077d0064888f3f3842ffc6958a8 867 PANTHER PTHR11638:SF11 2 855 0.0 T 22-04-2016 YPO3599 13523077d0064888f3f3842ffc6958a8 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPO3599 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:3.40.50.300 182 361 3.1E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3599 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 607 625 3.2E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3599 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 714 728 3.2E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3599 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 3.2E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3599 13523077d0064888f3f3842ffc6958a8 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 670 3.2E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3599 13523077d0064888f3f3842ffc6958a8 867 SUPERFAMILY SSF81923 12 126 1.02E-9 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO3599 13523077d0064888f3f3842ffc6958a8 867 PANTHER PTHR11638 2 855 0.0 T 22-04-2016 YPO3599 13523077d0064888f3f3842ffc6958a8 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 842 2.0E-8 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO3599 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:1.10.8.60 363 447 3.3E-28 T 22-04-2016 YPO3599 13523077d0064888f3f3842ffc6958a8 867 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 637 655 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YPO3599 13523077d0064888f3f3842ffc6958a8 867 Gene3D G3DSA:1.10.8.60 779 859 3.7E-6 T 22-04-2016 YPO0227 58c42f57a3daae6651d63045c445eb25 59 PIRSF PIRSF002211 1 59 2.9E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPO0227 58c42f57a3daae6651d63045c445eb25 59 Gene3D G3DSA:3.30.1390.20 2 59 2.4E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPO0227 58c42f57a3daae6651d63045c445eb25 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 8.7E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPO0227 58c42f57a3daae6651d63045c445eb25 59 SUPERFAMILY SSF55129 3 59 1.7E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPO0227 58c42f57a3daae6651d63045c445eb25 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.06 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPO0227 58c42f57a3daae6651d63045c445eb25 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site YPO0227 58c42f57a3daae6651d63045c445eb25 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.5E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPO0227 58c42f57a3daae6651d63045c445eb25 59 PANTHER PTHR15892 1 59 8.1E-29 T 22-04-2016 YPO2205 c61cae1a67200503155f08ffdef06d43 475 Gene3D G3DSA:3.20.20.70 25 281 2.8E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2205 c61cae1a67200503155f08ffdef06d43 475 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 278 475 30.456 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 YPO2205 c61cae1a67200503155f08ffdef06d43 475 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 26 277 35.073 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 YPO2205 c61cae1a67200503155f08ffdef06d43 475 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 280 471 6.5E-57 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 YPO2205 c61cae1a67200503155f08ffdef06d43 475 Gene3D G3DSA:3.20.20.70 282 468 6.3E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2205 c61cae1a67200503155f08ffdef06d43 475 PANTHER PTHR22854:SF2 2 305 9.4E-153 T 22-04-2016 YPO2205 c61cae1a67200503155f08ffdef06d43 475 SUPERFAMILY SSF51366 26 274 2.24E-83 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPO2205 c61cae1a67200503155f08ffdef06d43 475 PANTHER PTHR22854 2 305 9.4E-153 T 22-04-2016 YPO2205 c61cae1a67200503155f08ffdef06d43 475 SUPERFAMILY SSF51366 280 473 4.39E-57 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPO2205 c61cae1a67200503155f08ffdef06d43 475 Pfam PF00218 Indole-3-glycerol phosphate synthase 28 274 1.6E-95 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 YPO2205 c61cae1a67200503155f08ffdef06d43 475 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 73 91 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 YPO1469 b54278059162076c726900ada79c11b4 578 Gene3D G3DSA:3.30.1330.60 434 551 1.1E-29 T 22-04-2016 IPR006665 OmpA-like domain YPO1469 b54278059162076c726900ada79c11b4 578 PANTHER PTHR30128 6 578 0.0 T 22-04-2016 YPO1469 b54278059162076c726900ada79c11b4 578 Pfam PF00691 OmpA family 447 543 6.3E-15 T 22-04-2016 IPR006665 OmpA-like domain YPO1469 b54278059162076c726900ada79c11b4 578 SUPERFAMILY SSF103088 427 548 2.22E-29 T 22-04-2016 IPR006665 OmpA-like domain YPO1469 b54278059162076c726900ada79c11b4 578 PANTHER PTHR30128:SF11 6 578 0.0 T 22-04-2016 YPO0597 f05ba7272383d64dfb357d51ad22c193 212 PIRSF PIRSF020634 1 211 8.0E-80 T 22-04-2016 IPR011392 Tellurite resistance, TerY YPO0597 f05ba7272383d64dfb357d51ad22c193 212 Pfam PF00092 von Willebrand factor type A domain 6 157 1.5E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0597 f05ba7272383d64dfb357d51ad22c193 212 SUPERFAMILY SSF53300 5 159 4.87E-23 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0597 f05ba7272383d64dfb357d51ad22c193 212 Gene3D G3DSA:3.40.50.410 6 175 8.9E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0597 f05ba7272383d64dfb357d51ad22c193 212 SMART SM00327 3 178 4.3E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0976 d604b59d99c9991d1f418d8cde10f69f 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 448 4.7E-140 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO0976 d604b59d99c9991d1f418d8cde10f69f 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 447 4.7E-137 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO0976 d604b59d99c9991d1f418d8cde10f69f 450 PANTHER PTHR35566:SF3 1 450 0.0 T 22-04-2016 YPO0976 d604b59d99c9991d1f418d8cde10f69f 450 PANTHER PTHR35566 1 450 0.0 T 22-04-2016 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 Gene3D G3DSA:3.40.50.2300 6 133 3.0E-38 T 22-04-2016 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 PANTHER PTHR32071 6 470 3.4E-257 T 22-04-2016 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 Pfam PF00072 Response regulator receiver domain 6 115 6.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 SMART SM00448 4 115 8.5E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 PANTHER PTHR32071:SF15 6 470 3.4E-257 T 22-04-2016 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 Gene3D G3DSA:1.10.10.60 400 470 1.6E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 Gene3D G3DSA:1.10.8.60 314 392 9.4E-24 T 22-04-2016 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 SUPERFAMILY SSF52172 6 186 2.56E-47 T 22-04-2016 IPR011006 CheY-like superfamily YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 SUPERFAMILY SSF52540 140 384 2.66E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.6E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 SUPERFAMILY SSF46689 381 470 2.01E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 Gene3D G3DSA:3.40.50.300 139 313 1.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 SMART SM00382 161 312 6.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 2.4E-242 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 Pfam PF00158 Sigma-54 interaction domain 141 307 1.9E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO0022 373799a669fe0571c4b98e1e3ddcfca9 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 4.2E-52 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 PANTHER PTHR14021:SF15 1 174 4.9E-62 T 22-04-2016 YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.199 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 Gene3D G3DSA:1.20.1280.20 81 171 1.4E-29 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 SMART SM00271 1 66 7.8E-9 T 22-04-2016 IPR001623 DnaJ domain YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 SUPERFAMILY SSF47144 78 171 1.12E-24 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 PANTHER PTHR14021 1 174 4.9E-62 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 Pfam PF00226 DnaJ domain 2 70 6.8E-7 T 22-04-2016 IPR001623 DnaJ domain YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 Gene3D G3DSA:1.10.287.110 1 73 9.9E-27 T 22-04-2016 IPR001623 DnaJ domain YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 SUPERFAMILY SSF46565 1 74 3.53E-18 T 22-04-2016 IPR001623 DnaJ domain YPO2893 2618991127aa6bffbf98e337e8caa7ed 174 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 8.9E-16 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 YPO1860 64174b5fff37653a0e4f826733cddcf2 183 Pfam PF13505 Outer membrane protein beta-barrel domain 8 183 8.2E-21 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPO1860 64174b5fff37653a0e4f826733cddcf2 183 PANTHER PTHR35892:SF2 2 183 2.5E-101 T 22-04-2016 YPO1860 64174b5fff37653a0e4f826733cddcf2 183 SUPERFAMILY SSF56925 29 183 1.62E-26 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO1860 64174b5fff37653a0e4f826733cddcf2 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 98 121 1.0E-26 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO1860 64174b5fff37653a0e4f826733cddcf2 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 171 182 1.0E-26 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO1860 64174b5fff37653a0e4f826733cddcf2 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 55 67 1.0E-26 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO1860 64174b5fff37653a0e4f826733cddcf2 183 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 144 165 1.0E-26 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO1860 64174b5fff37653a0e4f826733cddcf2 183 PANTHER PTHR35892 2 183 2.5E-101 T 22-04-2016 YPO1860 64174b5fff37653a0e4f826733cddcf2 183 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 175 183 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO1860 64174b5fff37653a0e4f826733cddcf2 183 Gene3D G3DSA:2.40.160.20 28 183 3.6E-35 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO1345 c404471c3db5f49fd78186180414cb80 261 Gene3D G3DSA:3.40.50.300 3 227 2.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1345 c404471c3db5f49fd78186180414cb80 261 SUPERFAMILY SSF52540 4 223 2.11E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1345 c404471c3db5f49fd78186180414cb80 261 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1345 c404471c3db5f49fd78186180414cb80 261 PANTHER PTHR24220:SF218 5 240 1.4E-66 T 22-04-2016 YPO1345 c404471c3db5f49fd78186180414cb80 261 Pfam PF00005 ABC transporter 19 160 7.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1345 c404471c3db5f49fd78186180414cb80 261 PANTHER PTHR24220 5 240 1.4E-66 T 22-04-2016 YPO1345 c404471c3db5f49fd78186180414cb80 261 SMART SM00382 28 209 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO4065 3b5dc3ffe5e2b7fef8e6dd386bebd33d 118 Pfam PF10928 Protein of unknown function (DUF2810) 64 116 7.9E-33 T 22-04-2016 IPR021230 Protein of unknown function DUF2810 YPO0220 13b85a28b0b4b309ba6e7945e5bc55a1 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 5.0E-60 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPO0220 13b85a28b0b4b309ba6e7945e5bc55a1 123 Gene3D G3DSA:2.40.150.20 1 123 6.1E-56 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPO0220 13b85a28b0b4b309ba6e7945e5bc55a1 123 PANTHER PTHR11761 1 123 3.9E-78 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPO0220 13b85a28b0b4b309ba6e7945e5bc55a1 123 SMART SM01374 1 123 2.8E-86 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPO0220 13b85a28b0b4b309ba6e7945e5bc55a1 123 SUPERFAMILY SSF50193 2 122 1.57E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPO0220 13b85a28b0b4b309ba6e7945e5bc55a1 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 7.8E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPO0220 13b85a28b0b4b309ba6e7945e5bc55a1 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.101 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YPO0220 13b85a28b0b4b309ba6e7945e5bc55a1 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site YPO3442 5d15f456f2bcae339189ac616dad4869 149 SUPERFAMILY SSF102400 1 143 9.55E-48 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YPO3442 5d15f456f2bcae339189ac616dad4869 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 3.8E-39 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YPO3442 5d15f456f2bcae339189ac616dad4869 149 PANTHER PTHR38767 2 149 8.5E-68 T 22-04-2016 YPO3442 5d15f456f2bcae339189ac616dad4869 149 Gene3D G3DSA:3.40.50.10110 1 143 1.7E-53 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YPO3455 3aa923efaceffc43c0b26101c1d8fbb5 144 SUPERFAMILY SSF102114 14 101 1.45E-6 T 22-04-2016 YPO3455 3aa923efaceffc43c0b26101c1d8fbb5 144 PANTHER PTHR30352:SF2 2 141 3.2E-71 T 22-04-2016 YPO3455 3aa923efaceffc43c0b26101c1d8fbb5 144 PIRSF PIRSF000368 1 144 9.8E-56 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- YPO3455 3aa923efaceffc43c0b26101c1d8fbb5 144 PANTHER PTHR30352 2 141 3.2E-71 T 22-04-2016 YPO3455 3aa923efaceffc43c0b26101c1d8fbb5 144 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 1 141 1.9E-59 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- YPO3455 3aa923efaceffc43c0b26101c1d8fbb5 144 ProSitePatterns PS01087 Radical activating enzymes signature. 4 25 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 YPO3455 3aa923efaceffc43c0b26101c1d8fbb5 144 Gene3D G3DSA:3.20.20.70 14 119 5.2E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3455 3aa923efaceffc43c0b26101c1d8fbb5 144 Pfam PF13353 4Fe-4S single cluster domain 2 141 1.0E-51 T 22-04-2016 YPO3525 0c67cb0520820538d8b9fa8b14e9d1db 212 Gene3D G3DSA:3.30.1060.10 10 199 5.5E-77 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPO3525 0c67cb0520820538d8b9fa8b14e9d1db 212 PANTHER PTHR10173:SF36 6 204 3.1E-100 T 22-04-2016 YPO3525 0c67cb0520820538d8b9fa8b14e9d1db 212 SUPERFAMILY SSF55068 8 208 7.72E-81 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPO3525 0c67cb0520820538d8b9fa8b14e9d1db 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 7.9E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPO3525 0c67cb0520820538d8b9fa8b14e9d1db 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.44 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPO3525 0c67cb0520820538d8b9fa8b14e9d1db 212 PANTHER PTHR10173 6 204 3.1E-100 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 YPO3525 0c67cb0520820538d8b9fa8b14e9d1db 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 8.6E-66 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YPO3544 5d473e7890fdc826520daaf586997e5f 313 PIRSF PIRSF015753 4 290 2.4E-121 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 YPO3544 5d473e7890fdc826520daaf586997e5f 313 Gene3D G3DSA:3.40.30.10 22 162 2.2E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3544 5d473e7890fdc826520daaf586997e5f 313 SUPERFAMILY SSF47616 153 283 4.18E-31 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO3544 5d473e7890fdc826520daaf586997e5f 313 Pfam PF13409 Glutathione S-transferase, N-terminal domain 45 141 3.5E-24 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPO3544 5d473e7890fdc826520daaf586997e5f 313 PANTHER PTHR32419 29 283 9.6E-159 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 YPO3544 5d473e7890fdc826520daaf586997e5f 313 SUPERFAMILY SSF52833 109 146 1.52E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3544 5d473e7890fdc826520daaf586997e5f 313 SUPERFAMILY SSF52833 25 82 1.52E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3544 5d473e7890fdc826520daaf586997e5f 313 Gene3D G3DSA:1.20.1050.10 163 271 1.6E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO3544 5d473e7890fdc826520daaf586997e5f 313 Pfam PF13410 Glutathione S-transferase, C-terminal domain 187 254 1.8E-12 T 22-04-2016 YPO0690 e407655cbc59e0736e16039815a8418a 428 PANTHER PTHR30258 6 419 1.2E-138 T 22-04-2016 YPO0690 e407655cbc59e0736e16039815a8418a 428 Pfam PF00437 Type II/IV secretion system protein 74 349 8.5E-83 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPO0690 e407655cbc59e0736e16039815a8418a 428 Gene3D G3DSA:3.30.450.90 70 167 1.0E-32 T 22-04-2016 YPO0690 e407655cbc59e0736e16039815a8418a 428 SUPERFAMILY SSF52540 55 358 2.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0690 e407655cbc59e0736e16039815a8418a 428 Gene3D G3DSA:3.40.50.300 174 389 1.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0690 e407655cbc59e0736e16039815a8418a 428 PANTHER PTHR30258:SF3 6 419 1.2E-138 T 22-04-2016 YPO1761a d825063415ba041129c55627c878bc0a 254 PANTHER PTHR11820:SF8 27 249 6.3E-129 T 22-04-2016 YPO1761a d825063415ba041129c55627c878bc0a 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 47 243 1.3E-58 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1761a d825063415ba041129c55627c878bc0a 254 Gene3D G3DSA:3.90.850.10 39 246 5.6E-76 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1761a d825063415ba041129c55627c878bc0a 254 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 2.2E-114 T 22-04-2016 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 YPO1761a d825063415ba041129c55627c878bc0a 254 PANTHER PTHR11820 27 249 6.3E-129 T 22-04-2016 YPO1761a d825063415ba041129c55627c878bc0a 254 SUPERFAMILY SSF56529 38 245 1.7E-71 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 SMART SM01086 652 743 9.2E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 Gene3D G3DSA:1.10.1780.10 1 141 1.9E-44 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 SMART SM00382 486 653 3.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 SMART SM00382 205 351 4.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 SUPERFAMILY SSF81923 1 141 3.92E-58 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 342 8.0E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 Gene3D G3DSA:3.40.50.300 168 348 2.9E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 Gene3D G3DSA:3.40.50.300 442 662 2.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 2.7E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 PANTHER PTHR11638 1 754 0.0 T 22-04-2016 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 PANTHER PTHR11638:SF111 1 754 0.0 T 22-04-2016 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 646 1.6E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 SUPERFAMILY SSF52540 436 747 8.43E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.7E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 SUPERFAMILY SSF52540 168 426 8.72E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 Gene3D G3DSA:1.10.8.60 351 434 1.1E-30 T 22-04-2016 YPO1368 d0f2dd5d4c58fa23a5bf7537c4358099 758 Gene3D G3DSA:1.10.8.60 663 752 4.2E-32 T 22-04-2016 YPO1030 8aa146c21569963cc775be6e9d6fe2c9 131 PANTHER PTHR10584 6 67 3.8E-22 T 22-04-2016 YPO1030 8aa146c21569963cc775be6e9d6fe2c9 131 PANTHER PTHR10584:SF191 6 67 3.8E-22 T 22-04-2016 YPO1030 8aa146c21569963cc775be6e9d6fe2c9 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 3.0E-23 T 22-04-2016 IPR006696 Protein of unknown function DUF423 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 SUPERFAMILY SSF48029 113 323 2.09E-63 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 1.5E-139 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PANTHER PTHR30534:SF0 3 330 1.8E-115 T 22-04-2016 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PANTHER PTHR30534 3 330 1.8E-115 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Pfam PF14842 FliG N-terminal domain 3 102 1.5E-31 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Gene3D G3DSA:1.10.220.30 5 70 1.6E-17 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Gene3D G3DSA:1.10.220.30 193 327 4.8E-41 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Gene3D G3DSA:1.10.220.30 73 182 8.6E-29 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 SUPERFAMILY SSF48029 4 103 3.66E-21 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Pfam PF14841 FliG middle domain 114 186 5.6E-25 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.2E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 PIRSF PIRSF003161 1 330 1.3E-117 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YPO1829 e1f7c1ee5ad7ace1fece98f2cf34f2e5 330 Pfam PF01706 FliG C-terminal domain 216 322 4.3E-37 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal YPO1435 c820262d696b6c623331f6cf718b97ef 353 Pfam PF01389 OmpA-like transmembrane domain 23 200 5.9E-68 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PANTHER PTHR30128:SF16 1 353 8.8E-141 T 22-04-2016 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01021 OMPA domain signature 230 252 1.4E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01021 OMPA domain signature 262 277 1.4E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01021 OMPA domain signature 277 293 1.4E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 SUPERFAMILY SSF103088 217 341 1.96E-32 T 22-04-2016 IPR006665 OmpA-like domain YPO1435 c820262d696b6c623331f6cf718b97ef 353 Gene3D G3DSA:2.40.160.20 11 218 7.8E-74 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 Pfam PF00691 OmpA family 229 322 6.0E-19 T 22-04-2016 IPR006665 OmpA-like domain YPO1435 c820262d696b6c623331f6cf718b97ef 353 SUPERFAMILY SSF56925 22 200 1.33E-40 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 Gene3D G3DSA:3.30.1330.60 219 341 2.7E-36 T 22-04-2016 IPR006665 OmpA-like domain YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 171 185 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 320 333 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 247 266 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 218 233 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 185 199 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 286 305 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PRINTS PR01022 Outer membrane protein A signature 108 124 5.9E-63 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 ProSitePatterns PS01068 OmpA-like domain. 264 308 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 YPO1435 c820262d696b6c623331f6cf718b97ef 353 PANTHER PTHR30128 1 353 8.8E-141 T 22-04-2016 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 PANTHER PTHR30562 12 460 5.4E-240 T 22-04-2016 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 Gene3D G3DSA:1.10.1040.10 268 456 7.6E-50 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 12 171 5.6E-36 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 Gene3D G3DSA:3.40.50.720 4 265 1.5E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 SUPERFAMILY SSF51735 3 265 9.45E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 SUPERFAMILY SSF48179 268 455 1.63E-46 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 440 8.9E-75 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 PANTHER PTHR30562:SF4 12 460 5.4E-240 T 22-04-2016 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 PRINTS PR00084 Mannitol dehydrogenase signature 202 215 1.2E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 PRINTS PR00084 Mannitol dehydrogenase signature 12 22 1.2E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 PRINTS PR00084 Mannitol dehydrogenase signature 232 247 1.2E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO2325 85b7b95ba4ff562f67724d79f315d41b 463 PRINTS PR00084 Mannitol dehydrogenase signature 162 175 1.2E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO3743 65efb76c51b851bfb9c158c2bf212ae9 376 Gene3D G3DSA:3.20.20.70 38 363 1.1E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3743 65efb76c51b851bfb9c158c2bf212ae9 376 SMART SM00876 259 362 4.6E-32 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO3743 65efb76c51b851bfb9c158c2bf212ae9 376 SUPERFAMILY SSF102114 38 364 1.44E-54 T 22-04-2016 YPO3743 65efb76c51b851bfb9c158c2bf212ae9 376 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 5 369 1.4E-165 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 YPO3743 65efb76c51b851bfb9c158c2bf212ae9 376 Pfam PF04055 Radical SAM superfamily 83 220 2.2E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO3743 65efb76c51b851bfb9c158c2bf212ae9 376 PANTHER PTHR22976 1 374 5.5E-232 T 22-04-2016 YPO3743 65efb76c51b851bfb9c158c2bf212ae9 376 PANTHER PTHR22976:SF17 1 374 5.5E-232 T 22-04-2016 YPO3743 65efb76c51b851bfb9c158c2bf212ae9 376 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 361 1.2E-23 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO3748 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Gene3D G3DSA:1.20.5.710 4 51 4.7E-20 T 22-04-2016 YPO3748 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 1.1E-31 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 YPO3748 1f7ea1d0229147fd6fa6ea2361fa0e17 122 SUPERFAMILY SSF54736 51 122 1.12E-25 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPO3748 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 122 25.251 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3748 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Gene3D G3DSA:3.30.1390.10 52 122 8.6E-35 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPO3748 1f7ea1d0229147fd6fa6ea2361fa0e17 122 SUPERFAMILY SSF48300 4 58 3.66E-15 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3748 1f7ea1d0229147fd6fa6ea2361fa0e17 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 6.3E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3748 1f7ea1d0229147fd6fa6ea2361fa0e17 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 2.6E-14 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3748 1f7ea1d0229147fd6fa6ea2361fa0e17 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 7.0E-29 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 Gene3D G3DSA:3.40.50.720 1 201 7.5E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 8.2E-26 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 483 1.2E-21 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 4.1E-59 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 486 39.259 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 SUPERFAMILY SSF51735 30 207 1.45E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 SUPERFAMILY SSF48179 210 343 2.04E-39 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 3.3E-134 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 SUPERFAMILY SSF48179 348 485 2.72E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 Gene3D G3DSA:1.10.1040.10 362 482 9.5E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO3888 022a30a1b4a2f66d0a8afe0249ccc00d 492 PANTHER PTHR21371 1 490 2.4E-224 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 SUPERFAMILY SSF51735 1 154 3.96E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 Gene3D G3DSA:3.40.50.720 1 163 4.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 9.5E-185 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.406 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 SUPERFAMILY SSF55347 155 317 4.46E-54 T 22-04-2016 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 SMART SM00846 3 155 3.0E-78 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 PIRSF PIRSF000149 1 337 5.5E-128 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 Gene3D G3DSA:3.30.360.10 164 318 2.0E-57 T 22-04-2016 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 PANTHER PTHR10836:SF47 1 335 9.6E-256 T 22-04-2016 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 PANTHER PTHR10836 1 335 9.6E-256 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 3.4E-51 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 6.0E-51 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO0922 a5e1f37b1fc95de0696db3199471c9af 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO0221 befa1f16cd3678b4fd32cb80030666d8 104 SMART SM00739 4 31 9.8E-4 T 22-04-2016 IPR005824 KOW YPO0221 befa1f16cd3678b4fd32cb80030666d8 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 3.7E-23 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0221 befa1f16cd3678b4fd32cb80030666d8 104 PANTHER PTHR12903 4 103 3.6E-50 T 22-04-2016 YPO0221 befa1f16cd3678b4fd32cb80030666d8 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0221 befa1f16cd3678b4fd32cb80030666d8 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 2.3E-39 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0221 befa1f16cd3678b4fd32cb80030666d8 104 SUPERFAMILY SSF50104 4 101 5.54E-33 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPO0221 befa1f16cd3678b4fd32cb80030666d8 104 Pfam PF00467 KOW motif 8 37 7.6E-5 T 22-04-2016 IPR005824 KOW YPO0221 befa1f16cd3678b4fd32cb80030666d8 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.948 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0221 befa1f16cd3678b4fd32cb80030666d8 104 Gene3D G3DSA:2.30.30.30 3 92 8.6E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPO3943 c1f98984ef93a80bd8e6e706da451fd2 565 Gene3D G3DSA:3.30.565.10 422 559 8.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3943 c1f98984ef93a80bd8e6e706da451fd2 565 SUPERFAMILY SSF55874 426 558 5.2E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3943 c1f98984ef93a80bd8e6e706da451fd2 565 PANTHER PTHR34220 3 565 0.0 T 22-04-2016 YPO3943 c1f98984ef93a80bd8e6e706da451fd2 565 Pfam PF06580 Histidine kinase 373 450 2.9E-25 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 YPO3943 c1f98984ef93a80bd8e6e706da451fd2 565 Pfam PF07694 5TMR of 5TMR-LYT 30 198 1.4E-58 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 YPO3943 c1f98984ef93a80bd8e6e706da451fd2 565 SUPERFAMILY SSF55781 236 357 2.26E-5 T 22-04-2016 IPR029016 GAF domain-like YPO3943 c1f98984ef93a80bd8e6e706da451fd2 565 PANTHER PTHR34220:SF3 3 565 0.0 T 22-04-2016 YPO3587 61dd9be5242ae58664770b4e9256ac00 90 PANTHER PTHR33705:SF2 1 90 2.1E-39 T 22-04-2016 YPO3587 61dd9be5242ae58664770b4e9256ac00 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 5.2E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO3587 61dd9be5242ae58664770b4e9256ac00 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.6E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO3587 61dd9be5242ae58664770b4e9256ac00 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO3587 61dd9be5242ae58664770b4e9256ac00 90 SUPERFAMILY SSF55594 4 90 1.02E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO3587 61dd9be5242ae58664770b4e9256ac00 90 Gene3D G3DSA:3.30.1340.10 3 89 7.1E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO3587 61dd9be5242ae58664770b4e9256ac00 90 PANTHER PTHR33705 1 90 2.1E-39 T 22-04-2016 YPO3587 61dd9be5242ae58664770b4e9256ac00 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 5.9E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO3587 61dd9be5242ae58664770b4e9256ac00 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 5.9E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO3587 61dd9be5242ae58664770b4e9256ac00 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 5.9E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO0584 06489358b94d61e16e03544b4b0d12f8 422 PANTHER PTHR11958:SF68 12 414 1.8E-269 T 22-04-2016 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 SUPERFAMILY SSF118215 21 404 1.96E-95 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 9 410 36.333 T 22-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 Gene3D G3DSA:1.10.3860.10 15 408 1.4E-83 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 PANTHER PTHR11958 12 414 1.8E-269 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 Pfam PF00375 Sodium:dicarboxylate symporter family 21 402 3.2E-64 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 9.1E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 9.1E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 9.1E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 PRINTS PR00173 Glutamate-aspartate symporter signature 191 210 9.1E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 9.1E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0584 06489358b94d61e16e03544b4b0d12f8 422 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 9.1E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO2021 4ae31d38718d86c248e587c26d7807e8 284 Gene3D G3DSA:3.20.20.70 18 281 3.7E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2021 4ae31d38718d86c248e587c26d7807e8 284 PANTHER PTHR21057:SF6 1 284 1.8E-231 T 22-04-2016 YPO2021 4ae31d38718d86c248e587c26d7807e8 284 Pfam PF00793 DAHP synthetase I family 10 275 7.6E-68 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPO2021 4ae31d38718d86c248e587c26d7807e8 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.4E-118 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPO2021 4ae31d38718d86c248e587c26d7807e8 284 PANTHER PTHR21057 1 284 1.8E-231 T 22-04-2016 YPO2021 4ae31d38718d86c248e587c26d7807e8 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.167 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPO2021 4ae31d38718d86c248e587c26d7807e8 284 SUPERFAMILY SSF51569 3 279 6.32E-103 T 22-04-2016 YPO2188 658f2636d618db8fec6587077c82c4be 486 SUPERFAMILY SSF56024 67 315 3.14E-48 T 22-04-2016 YPO2188 658f2636d618db8fec6587077c82c4be 486 Gene3D G3DSA:3.30.870.10 112 319 5.5E-36 T 22-04-2016 YPO2188 658f2636d618db8fec6587077c82c4be 486 Gene3D G3DSA:3.30.870.10 320 483 3.0E-36 T 22-04-2016 YPO2188 658f2636d618db8fec6587077c82c4be 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 3.9E-7 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal YPO2188 658f2636d618db8fec6587077c82c4be 486 PANTHER PTHR21248:SF9 18 486 0.0 T 22-04-2016 YPO2188 658f2636d618db8fec6587077c82c4be 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 1.7E-209 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 YPO2188 658f2636d618db8fec6587077c82c4be 486 SMART SM00155 219 246 5.2E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YPO2188 658f2636d618db8fec6587077c82c4be 486 SMART SM00155 399 426 7.3E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YPO2188 658f2636d618db8fec6587077c82c4be 486 SUPERFAMILY SSF56024 273 473 9.64E-51 T 22-04-2016 YPO2188 658f2636d618db8fec6587077c82c4be 486 Pfam PF13091 PLD-like domain 330 448 2.1E-23 T 22-04-2016 IPR025202 Phospholipase D-like domain YPO2188 658f2636d618db8fec6587077c82c4be 486 Pfam PF13091 PLD-like domain 135 244 3.3E-12 T 22-04-2016 IPR025202 Phospholipase D-like domain YPO2188 658f2636d618db8fec6587077c82c4be 486 PANTHER PTHR21248 18 486 0.0 T 22-04-2016 YPO2188 658f2636d618db8fec6587077c82c4be 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 52.669 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 YPO2052 303f811d33ec73c64679f2ec646866c6 271 Gene3D G3DSA:3.20.20.410 2 261 3.0E-69 T 22-04-2016 IPR002763 Protein of unknown function DUF72 YPO2052 303f811d33ec73c64679f2ec646866c6 271 PANTHER PTHR30348 1 268 8.7E-95 T 22-04-2016 YPO2052 303f811d33ec73c64679f2ec646866c6 271 PANTHER PTHR30348:SF3 1 268 8.7E-95 T 22-04-2016 YPO2052 303f811d33ec73c64679f2ec646866c6 271 SUPERFAMILY SSF117396 2 251 4.45E-66 T 22-04-2016 IPR002763 Protein of unknown function DUF72 YPO2052 303f811d33ec73c64679f2ec646866c6 271 Pfam PF01904 Protein of unknown function DUF72 20 248 2.0E-51 T 22-04-2016 IPR002763 Protein of unknown function DUF72 YPO2156 8c5f7dd02b52866b1314e6e53d553ff7 291 PIRSF PIRSF016020 8 291 1.9E-55 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 YPO2156 8c5f7dd02b52866b1314e6e53d553ff7 291 Gene3D G3DSA:2.70.98.10 11 286 8.5E-86 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YPO2156 8c5f7dd02b52866b1314e6e53d553ff7 291 PANTHER PTHR11122 6 291 2.5E-135 T 22-04-2016 YPO2156 8c5f7dd02b52866b1314e6e53d553ff7 291 Pfam PF01263 Aldose 1-epimerase 28 275 3.7E-45 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 YPO2156 8c5f7dd02b52866b1314e6e53d553ff7 291 PANTHER PTHR11122:SF14 6 291 2.5E-135 T 22-04-2016 YPO2156 8c5f7dd02b52866b1314e6e53d553ff7 291 SUPERFAMILY SSF74650 8 285 1.65E-71 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPO2209 59ec54618662618ad0eb8e6f8f44f675 20 Pfam PF08255 Trp-operon Leader Peptide 2 15 6.6E-7 T 22-04-2016 IPR013205 Leader peptide, tryptophan-operon YPO1075 e7766844d9ecc68b7da289e85abe3766 267 PIRSF PIRSF000097 1 266 1.0E-62 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO1075 e7766844d9ecc68b7da289e85abe3766 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPO1075 e7766844d9ecc68b7da289e85abe3766 267 PANTHER PTHR11732 1 267 4.0E-178 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPO1075 e7766844d9ecc68b7da289e85abe3766 267 PANTHER PTHR11732:SF100 1 267 4.0E-178 T 22-04-2016 YPO1075 e7766844d9ecc68b7da289e85abe3766 267 Gene3D G3DSA:3.20.20.100 1 259 1.8E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO1075 e7766844d9ecc68b7da289e85abe3766 267 Pfam PF00248 Aldo/keto reductase family 8 250 2.6E-45 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO1075 e7766844d9ecc68b7da289e85abe3766 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPO1075 e7766844d9ecc68b7da289e85abe3766 267 SUPERFAMILY SSF51430 2 259 7.33E-76 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO1075 e7766844d9ecc68b7da289e85abe3766 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 3.3E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO1075 e7766844d9ecc68b7da289e85abe3766 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 3.3E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO1075 e7766844d9ecc68b7da289e85abe3766 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 3.3E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO1075 e7766844d9ecc68b7da289e85abe3766 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 3.3E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO1075 e7766844d9ecc68b7da289e85abe3766 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 3.3E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO0160 55bf78bcff0c084ef19b3d5c5a098337 108 Gene3D G3DSA:2.102.10.10 2 107 1.2E-41 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPO0160 55bf78bcff0c084ef19b3d5c5a098337 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 6.1E-37 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 YPO0160 55bf78bcff0c084ef19b3d5c5a098337 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 5.5E-41 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 YPO0160 55bf78bcff0c084ef19b3d5c5a098337 108 SUPERFAMILY SSF50022 1 107 2.14E-37 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPO0160 55bf78bcff0c084ef19b3d5c5a098337 108 PANTHER PTHR40562 1 108 1.5E-70 T 22-04-2016 YPO0755 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF46689 57 158 5.55E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0755 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.10 5 53 3.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0755 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795 1 171 7.6E-86 T 22-04-2016 YPO0755 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795:SF1 1 171 7.6E-86 T 22-04-2016 YPO0755 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF48295 2 53 8.89E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPO0755 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 63 115 3.3E-12 T 22-04-2016 YPO0755 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 8 53 3.7E-9 T 22-04-2016 YPO0755 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.60 60 154 3.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3492 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF46689 57 158 5.55E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3492 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.10 5 53 3.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3492 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795 1 171 7.6E-86 T 22-04-2016 YPO3492 13cd391c6e03d507b93842c23fc0ffcc 171 PANTHER PTHR33795:SF1 1 171 7.6E-86 T 22-04-2016 YPO3492 13cd391c6e03d507b93842c23fc0ffcc 171 SUPERFAMILY SSF48295 2 53 8.89E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPO3492 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 63 115 3.3E-12 T 22-04-2016 YPO3492 13cd391c6e03d507b93842c23fc0ffcc 171 Pfam PF13518 Helix-turn-helix domain 8 53 3.7E-9 T 22-04-2016 YPO3492 13cd391c6e03d507b93842c23fc0ffcc 171 Gene3D G3DSA:1.10.10.60 60 154 3.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3730 c66b5c75977dce6a5f10b27c9f4630a6 233 Pfam PF07356 Protein of unknown function (DUF1481) 44 229 5.1E-76 T 22-04-2016 IPR010858 Protein of unknown function DUF1481 YPO3730 c66b5c75977dce6a5f10b27c9f4630a6 233 PIRSF PIRSF006993 1 233 2.7E-117 T 22-04-2016 IPR016500 Uncharacterised conserved protein UCP006993 YPO2398 a202089aa49465ae36960d18e7708f51 339 SUPERFAMILY SSF141523 98 235 8.89E-30 T 22-04-2016 YPO2398 a202089aa49465ae36960d18e7708f51 339 Pfam PF03734 L,D-transpeptidase catalytic domain 100 235 1.0E-19 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 YPO2398 a202089aa49465ae36960d18e7708f51 339 Gene3D G3DSA:2.40.440.10 93 237 3.1E-36 T 22-04-2016 YPO2398 a202089aa49465ae36960d18e7708f51 339 PANTHER PTHR30582:SF9 53 312 6.9E-127 T 22-04-2016 YPO2398 a202089aa49465ae36960d18e7708f51 339 PANTHER PTHR30582 53 312 6.9E-127 T 22-04-2016 YPO0039 07b16ad13a23144941e6bd990763d9f7 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.1E-28 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0039 07b16ad13a23144941e6bd990763d9f7 91 SMART SM01409 8 61 1.0E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0039 07b16ad13a23144941e6bd990763d9f7 91 Gene3D G3DSA:3.90.940.10 1 78 2.2E-16 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0039 07b16ad13a23144941e6bd990763d9f7 91 PANTHER PTHR34476 2 91 5.0E-32 T 22-04-2016 YPO0039 07b16ad13a23144941e6bd990763d9f7 91 SUPERFAMILY SSF63562 1 78 3.49E-25 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0039 07b16ad13a23144941e6bd990763d9f7 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.134 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0039 07b16ad13a23144941e6bd990763d9f7 91 Pfam PF01192 RNA polymerase Rpb6 10 60 7.2E-17 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO4060 5d63ba3f44f7e66b4794ba72e0906dc5 274 SUPERFAMILY SSF53927 25 273 1.53E-79 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPO4060 5d63ba3f44f7e66b4794ba72e0906dc5 274 Gene3D G3DSA:3.40.140.10 139 273 3.9E-48 T 22-04-2016 YPO4060 5d63ba3f44f7e66b4794ba72e0906dc5 274 Hamap MF_00187 Protein FdhD [fdhD]. 13 274 36.098 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YPO4060 5d63ba3f44f7e66b4794ba72e0906dc5 274 PANTHER PTHR30592:SF1 5 274 1.9E-130 T 22-04-2016 YPO4060 5d63ba3f44f7e66b4794ba72e0906dc5 274 Gene3D G3DSA:3.10.20.10 40 125 1.2E-32 T 22-04-2016 YPO4060 5d63ba3f44f7e66b4794ba72e0906dc5 274 PANTHER PTHR30592 5 274 1.9E-130 T 22-04-2016 YPO4060 5d63ba3f44f7e66b4794ba72e0906dc5 274 PIRSF PIRSF015626 4 274 5.6E-79 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YPO4060 5d63ba3f44f7e66b4794ba72e0906dc5 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 274 3.0E-88 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YPO4060 5d63ba3f44f7e66b4794ba72e0906dc5 274 Pfam PF02634 FdhD/NarQ family 38 273 9.8E-72 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 PANTHER PTHR30034:SF0 2 332 1.2E-155 T 22-04-2016 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 SUPERFAMILY SSF103039 48 230 9.94E-20 T 22-04-2016 IPR028976 CheC-like domain YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 320 9.0E-109 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 PANTHER PTHR30034 2 332 1.2E-155 T 22-04-2016 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 Gene3D G3DSA:2.30.330.10 243 322 4.0E-4 T 22-04-2016 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 Pfam PF02154 Flagellar motor switch protein FliM 37 230 2.9E-74 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 2.3E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 2.3E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.3E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 2.3E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 320 7.4E-15 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 PIRSF PIRSF002888 2 330 3.0E-93 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YPO1823 fbbd5e29c0d2a5a4ba26d37a11efe6ee 333 SUPERFAMILY SSF101801 249 322 2.09E-11 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO2467 802c1544b75e4351c12f4416151da93e 1095 SUPERFAMILY SSF52540 529 629 1.58E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2467 802c1544b75e4351c12f4416151da93e 1095 SUPERFAMILY SSF52540 828 872 1.58E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2467 802c1544b75e4351c12f4416151da93e 1095 SUPERFAMILY SSF52540 711 797 1.58E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2467 802c1544b75e4351c12f4416151da93e 1095 SUPERFAMILY SSF52540 430 478 1.58E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2467 802c1544b75e4351c12f4416151da93e 1095 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1091 0.0 T 22-04-2016 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YPO2467 802c1544b75e4351c12f4416151da93e 1095 Gene3D G3DSA:3.40.50.300 557 638 2.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2467 802c1544b75e4351c12f4416151da93e 1095 Gene3D G3DSA:3.40.50.300 402 509 2.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3121 6140810bea07c4c4c7ed660db78322e5 110 SUPERFAMILY SSF82607 11 104 1.57E-34 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPO3121 6140810bea07c4c4c7ed660db78322e5 110 PANTHER PTHR33449 1 110 2.6E-54 T 22-04-2016 YPO3121 6140810bea07c4c4c7ed660db78322e5 110 PIRSF PIRSF004555 3 110 6.4E-39 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPO3121 6140810bea07c4c4c7ed660db78322e5 110 Gene3D G3DSA:3.30.1310.10 1 110 1.8E-49 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPO3121 6140810bea07c4c4c7ed660db78322e5 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 22.965 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPO3121 6140810bea07c4c4c7ed660db78322e5 110 PANTHER PTHR33449:SF1 1 110 2.6E-54 T 22-04-2016 YPO3121 6140810bea07c4c4c7ed660db78322e5 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 3.4E-41 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPO3121 6140810bea07c4c4c7ed660db78322e5 110 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 4.1E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPO0515 006b72a318ad6522c8bd7eff5849711f 1150 PANTHER PTHR36153:SF4 5 1150 0.0 T 22-04-2016 YPO0515 006b72a318ad6522c8bd7eff5849711f 1150 PANTHER PTHR36153 5 1150 0.0 T 22-04-2016 YPO0515 006b72a318ad6522c8bd7eff5849711f 1150 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1148 0.0 T 22-04-2016 IPR017731 Type VI secretion system, IcmF YPO0515 006b72a318ad6522c8bd7eff5849711f 1150 Pfam PF06744 Type VI secretion protein IcmF C-terminal 902 1096 3.9E-54 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal YPO0515 006b72a318ad6522c8bd7eff5849711f 1150 Pfam PF14331 ImcF-related N-terminal domain 183 363 6.0E-29 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain YPO0515 006b72a318ad6522c8bd7eff5849711f 1150 Pfam PF06761 Intracellular multiplication and human macrophage-killing 499 778 6.4E-61 T 22-04-2016 IPR009612 ImcF-related YPO0515 006b72a318ad6522c8bd7eff5849711f 1150 Gene3D G3DSA:3.40.50.300 92 256 4.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0515 006b72a318ad6522c8bd7eff5849711f 1150 SUPERFAMILY SSF52540 108 260 2.83E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3096 93695ae776dd676e12c384368407206c 383 SUPERFAMILY SSF160355 67 333 3.79E-81 T 22-04-2016 YPO3096 93695ae776dd676e12c384368407206c 383 Gene3D G3DSA:3.30.1890.10 57 214 5.4E-58 T 22-04-2016 YPO3096 93695ae776dd676e12c384368407206c 383 Gene3D G3DSA:1.10.287.210 215 320 2.3E-41 T 22-04-2016 YPO3096 93695ae776dd676e12c384368407206c 383 Pfam PF02706 Chain length determinant protein 28 192 1.1E-22 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 YPO2838 8c0567aeaf52f99739b6302e58cf5205 70 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 10 57 6.0E-20 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 YPO2838 8c0567aeaf52f99739b6302e58cf5205 70 Pfam PF11119 Protein of unknown function (DUF2633) 9 64 3.7E-32 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 SUPERFAMILY SSF52172 1 125 6.97E-28 T 22-04-2016 IPR011006 CheY-like superfamily YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 6.2E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 SMART SM00421 143 200 1.8E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 Pfam PF00072 Response regulator receiver domain 4 115 1.8E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 Gene3D G3DSA:1.10.10.10 145 205 5.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 SUPERFAMILY SSF46894 130 206 4.08E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 Gene3D G3DSA:3.40.50.2300 1 144 2.5E-30 T 22-04-2016 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 SMART SM00448 2 115 4.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 PANTHER PTHR26402:SF612 2 202 1.3E-156 T 22-04-2016 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 3.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 3.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 3.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1576 2170942f84359f8a1cae061c5e24ee8f 209 PANTHER PTHR26402 2 202 1.3E-156 T 22-04-2016 YPO0415 d7b7b568cd89e8dc70cea68ca68b32da 530 Gene3D G3DSA:3.30.420.40 11 260 7.8E-56 T 22-04-2016 YPO0415 d7b7b568cd89e8dc70cea68ca68b32da 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 467 8.9E-20 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPO0415 d7b7b568cd89e8dc70cea68ca68b32da 530 SUPERFAMILY SSF53067 262 512 3.06E-48 T 22-04-2016 YPO0415 d7b7b568cd89e8dc70cea68ca68b32da 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 260 6.9E-47 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPO0415 d7b7b568cd89e8dc70cea68ca68b32da 530 SUPERFAMILY SSF53067 13 263 1.35E-57 T 22-04-2016 YPO0415 d7b7b568cd89e8dc70cea68ca68b32da 530 Gene3D G3DSA:3.30.420.40 262 516 4.9E-40 T 22-04-2016 YPO0415 d7b7b568cd89e8dc70cea68ca68b32da 530 PANTHER PTHR10196:SF70 1 524 0.0 T 22-04-2016 YPO0415 d7b7b568cd89e8dc70cea68ca68b32da 530 PANTHER PTHR10196 1 524 0.0 T 22-04-2016 YPO0415 d7b7b568cd89e8dc70cea68ca68b32da 530 PIRSF PIRSF000538 11 518 1.1E-113 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO3928 05429d906976d98c06fd12a1189eeec8 389 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 387 65.426 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 YPO3928 05429d906976d98c06fd12a1189eeec8 389 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 382 5.8E-155 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 YPO3928 05429d906976d98c06fd12a1189eeec8 389 SUPERFAMILY SSF55031 186 300 3.44E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO3928 05429d906976d98c06fd12a1189eeec8 389 PANTHER PTHR11014:SF75 7 389 1.4E-239 T 22-04-2016 YPO3928 05429d906976d98c06fd12a1189eeec8 389 PANTHER PTHR11014 7 389 1.4E-239 T 22-04-2016 YPO3928 05429d906976d98c06fd12a1189eeec8 389 Pfam PF01546 Peptidase family M20/M25/M40 81 382 2.7E-33 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPO3928 05429d906976d98c06fd12a1189eeec8 389 Gene3D G3DSA:3.40.630.10 6 194 4.8E-62 T 22-04-2016 YPO3928 05429d906976d98c06fd12a1189eeec8 389 Gene3D G3DSA:3.40.630.10 328 387 4.8E-62 T 22-04-2016 YPO3928 05429d906976d98c06fd12a1189eeec8 389 Gene3D G3DSA:3.30.70.360 195 295 5.7E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO3928 05429d906976d98c06fd12a1189eeec8 389 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 80 89 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPO3928 05429d906976d98c06fd12a1189eeec8 389 SUPERFAMILY SSF53187 310 387 2.63E-57 T 22-04-2016 YPO3928 05429d906976d98c06fd12a1189eeec8 389 SUPERFAMILY SSF53187 4 185 2.63E-57 T 22-04-2016 YPO3928 05429d906976d98c06fd12a1189eeec8 389 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 115 152 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPO3928 05429d906976d98c06fd12a1189eeec8 389 Pfam PF07687 Peptidase dimerisation domain 183 292 1.2E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO1139 826df83cb66dcee8721b80e0cfc0d658 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 9.0E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1139 826df83cb66dcee8721b80e0cfc0d658 338 Gene3D G3DSA:3.40.50.720 1 179 6.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1139 826df83cb66dcee8721b80e0cfc0d658 338 PANTHER PTHR10366:SF39 2 336 3.0E-148 T 22-04-2016 YPO1139 826df83cb66dcee8721b80e0cfc0d658 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 1.1E-141 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 YPO1139 826df83cb66dcee8721b80e0cfc0d658 338 PANTHER PTHR10366 2 336 3.0E-148 T 22-04-2016 YPO1139 826df83cb66dcee8721b80e0cfc0d658 338 Gene3D G3DSA:3.90.25.10 180 232 6.6E-51 T 22-04-2016 YPO1139 826df83cb66dcee8721b80e0cfc0d658 338 Gene3D G3DSA:3.90.25.10 264 337 6.6E-51 T 22-04-2016 YPO1139 826df83cb66dcee8721b80e0cfc0d658 338 SUPERFAMILY SSF51735 1 336 2.7E-98 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1279 1d5b3015e34dba4e3362215551789b1d 266 SUPERFAMILY SSF46785 17 89 1.03E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1279 1d5b3015e34dba4e3362215551789b1d 266 Pfam PF07729 FCD domain 109 235 3.8E-22 T 22-04-2016 IPR011711 GntR, C-terminal YPO1279 1d5b3015e34dba4e3362215551789b1d 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 8.7E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1279 1d5b3015e34dba4e3362215551789b1d 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 8.7E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1279 1d5b3015e34dba4e3362215551789b1d 266 PANTHER PTHR11751 14 125 1.4E-46 T 22-04-2016 YPO1279 1d5b3015e34dba4e3362215551789b1d 266 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 1.9E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1279 1d5b3015e34dba4e3362215551789b1d 266 SUPERFAMILY SSF48008 107 243 2.28E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO1279 1d5b3015e34dba4e3362215551789b1d 266 SMART SM00345 26 85 2.3E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1279 1d5b3015e34dba4e3362215551789b1d 266 Gene3D G3DSA:1.20.120.530 108 245 7.3E-30 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO1279 1d5b3015e34dba4e3362215551789b1d 266 PANTHER PTHR11751:SF389 14 125 1.4E-46 T 22-04-2016 YPO1279 1d5b3015e34dba4e3362215551789b1d 266 SMART SM00895 109 236 8.1E-22 T 22-04-2016 IPR011711 GntR, C-terminal YPO1279 1d5b3015e34dba4e3362215551789b1d 266 Gene3D G3DSA:1.10.10.10 20 88 2.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0532 6b4759ec7d3bcac1c84c7b434f2abb57 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.9E-135 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO0532 6b4759ec7d3bcac1c84c7b434f2abb57 363 PANTHER PTHR11835 1 357 8.2E-204 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPO0532 6b4759ec7d3bcac1c84c7b434f2abb57 363 SUPERFAMILY SSF53659 2 359 2.88E-122 T 22-04-2016 YPO0532 6b4759ec7d3bcac1c84c7b434f2abb57 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 8.8E-166 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 YPO0532 6b4759ec7d3bcac1c84c7b434f2abb57 363 PANTHER PTHR11835:SF35 1 357 8.2E-204 T 22-04-2016 YPO0532 6b4759ec7d3bcac1c84c7b434f2abb57 363 Gene3D G3DSA:3.40.718.10 2 357 6.7E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO0532 6b4759ec7d3bcac1c84c7b434f2abb57 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPO0532 6b4759ec7d3bcac1c84c7b434f2abb57 363 SMART SM01329 6 355 1.2E-198 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO0532 6b4759ec7d3bcac1c84c7b434f2abb57 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.298 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 Gene3D G3DSA:4.10.520.10 1 90 1.9E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 PANTHER PTHR33175:SF4 1 90 2.6E-60 T 22-04-2016 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 PANTHER PTHR33175 1 90 2.6E-60 T 22-04-2016 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 SMART SM00411 1 90 6.3E-44 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO3731 be09dc7492f443309dfbef4f621ad7b5 91 SUPERFAMILY SSF47729 1 90 1.15E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 183 241 6.1E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 SUPERFAMILY SSF49584 151 243 7.33E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 Gene3D G3DSA:2.60.40.1070 166 243 4.3E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 34 157 2.5E-39 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 PANTHER PTHR30251 4 248 2.1E-133 T 22-04-2016 YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 PANTHER PTHR30251:SF7 4 248 2.1E-133 T 22-04-2016 YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 SUPERFAMILY SSF49354 28 157 3.66E-37 T 22-04-2016 IPR008962 PapD-like YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 Gene3D G3DSA:2.60.40.360 34 157 1.2E-37 T 22-04-2016 IPR008962 PapD-like YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 PRINTS PR00969 Pili chaperone signature 178 193 7.9E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 PRINTS PR00969 Pili chaperone signature 83 104 7.9E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 PRINTS PR00969 Pili chaperone signature 112 129 7.9E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 PRINTS PR00969 Pili chaperone signature 34 43 7.9E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 PRINTS PR00969 Pili chaperone signature 139 154 7.9E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3881 4244c7ee0495deda3e1f1588b15fa66a 248 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 Pfam PF01568 Molydopterin dinucleotide binding domain 697 808 1.0E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 Gene3D G3DSA:3.40.50.740 441 520 2.1E-45 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 Gene3D G3DSA:3.40.50.740 119 209 2.1E-45 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 SMART SM00926 58 118 4.5E-8 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 Gene3D G3DSA:2.40.40.20 672 816 3.0E-54 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 733 760 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 Gene3D G3DSA:2.20.25.90 56 118 1.2E-16 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 PANTHER PTHR11615:SF128 354 816 0.0 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 PANTHER PTHR11615:SF128 7 322 0.0 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 Gene3D G3DSA:3.40.228.10 216 440 2.1E-89 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 816 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 SUPERFAMILY SSF53706 59 699 5.89E-176 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 Pfam PF00384 Molybdopterin oxidoreductase 121 576 3.4E-107 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 SUPERFAMILY SSF50692 643 816 4.75E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 519 536 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 63 81 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 PANTHER PTHR11615 354 816 0.0 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 PANTHER PTHR11615 7 322 0.0 T 22-04-2016 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 59 118 1.5E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO3325 bd503a3bf920f7e7cd7f398e04af341d 816 Gene3D G3DSA:3.90.55.10 521 622 1.6E-22 T 22-04-2016 YPO1213 5013ba42746c9c1b70dd24d4e82c3fe1 376 PANTHER PTHR23409 197 376 7.0E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPO1213 5013ba42746c9c1b70dd24d4e82c3fe1 376 PANTHER PTHR23409 1 173 7.0E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPO1213 5013ba42746c9c1b70dd24d4e82c3fe1 376 Gene3D G3DSA:1.10.620.20 3 340 6.7E-123 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 YPO1213 5013ba42746c9c1b70dd24d4e82c3fe1 376 PANTHER PTHR23409:SF23 197 376 7.0E-270 T 22-04-2016 YPO1213 5013ba42746c9c1b70dd24d4e82c3fe1 376 PANTHER PTHR23409:SF23 1 173 7.0E-270 T 22-04-2016 YPO1213 5013ba42746c9c1b70dd24d4e82c3fe1 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 8.7E-46 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPO1213 5013ba42746c9c1b70dd24d4e82c3fe1 376 SUPERFAMILY SSF47240 3 340 1.79E-111 T 22-04-2016 IPR009078 Ferritin-like superfamily YPO1213 5013ba42746c9c1b70dd24d4e82c3fe1 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO2695 fe9e2dae381399373c439393880388be 487 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YPO2695 fe9e2dae381399373c439393880388be 487 Gene3D G3DSA:1.25.40.80 150 285 1.4E-44 T 22-04-2016 YPO2695 fe9e2dae381399373c439393880388be 487 PANTHER PTHR11455 1 478 8.9E-219 T 22-04-2016 YPO2695 fe9e2dae381399373c439393880388be 487 PRINTS PR00147 DNA photolyase signature 384 398 5.7E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YPO2695 fe9e2dae381399373c439393880388be 487 PRINTS PR00147 DNA photolyase signature 325 341 5.7E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YPO2695 fe9e2dae381399373c439393880388be 487 PRINTS PR00147 DNA photolyase signature 345 363 5.7E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YPO2695 fe9e2dae381399373c439393880388be 487 PRINTS PR00147 DNA photolyase signature 145 161 5.7E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YPO2695 fe9e2dae381399373c439393880388be 487 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YPO2695 fe9e2dae381399373c439393880388be 487 SUPERFAMILY SSF48173 192 472 6.54E-108 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YPO2695 fe9e2dae381399373c439393880388be 487 Gene3D G3DSA:3.40.50.620 2 149 2.0E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2695 fe9e2dae381399373c439393880388be 487 Pfam PF00875 DNA photolyase 5 175 4.7E-43 T 22-04-2016 IPR006050 DNA photolyase, N-terminal YPO2695 fe9e2dae381399373c439393880388be 487 Pfam PF03441 FAD binding domain of DNA photolyase 275 469 1.4E-81 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YPO2695 fe9e2dae381399373c439393880388be 487 Gene3D G3DSA:1.10.579.10 286 472 1.6E-78 T 22-04-2016 YPO2695 fe9e2dae381399373c439393880388be 487 PANTHER PTHR11455:SF18 1 478 8.9E-219 T 22-04-2016 YPO2695 fe9e2dae381399373c439393880388be 487 SUPERFAMILY SSF52425 3 183 1.09E-53 T 22-04-2016 IPR006050 DNA photolyase, N-terminal YPO3314 4a05d7cf0c8b7dcd334a309a99083b72 276 Gene3D G3DSA:3.40.50.970 3 274 4.2E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3314 4a05d7cf0c8b7dcd334a309a99083b72 276 PANTHER PTHR11624 7 276 2.5E-81 T 22-04-2016 IPR033247 Transketolase family YPO3314 4a05d7cf0c8b7dcd334a309a99083b72 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 26 267 1.7E-36 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO3314 4a05d7cf0c8b7dcd334a309a99083b72 276 PANTHER PTHR11624:SF86 7 276 2.5E-81 T 22-04-2016 YPO3314 4a05d7cf0c8b7dcd334a309a99083b72 276 SUPERFAMILY SSF52518 3 273 1.59E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3620 a3b7e71f495f9503c83d8db2f8484b15 167 Pfam PF05025 RbsD / FucU transport protein family 1 130 8.6E-30 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 YPO3620 a3b7e71f495f9503c83d8db2f8484b15 167 PANTHER PTHR31690:SF6 1 139 5.4E-58 T 22-04-2016 YPO3620 a3b7e71f495f9503c83d8db2f8484b15 167 SUPERFAMILY SSF102546 1 129 5.36E-31 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YPO3620 a3b7e71f495f9503c83d8db2f8484b15 167 Gene3D G3DSA:3.40.1650.10 2 129 8.7E-22 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YPO3620 a3b7e71f495f9503c83d8db2f8484b15 167 PANTHER PTHR31690 1 139 5.4E-58 T 22-04-2016 YPO0502 0c51a47b01dc1c081e72b35f42036938 172 SUPERFAMILY SSF141452 5 169 5.23E-40 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO0502 0c51a47b01dc1c081e72b35f42036938 172 PANTHER PTHR36152:SF4 1 172 1.9E-141 T 22-04-2016 YPO0502 0c51a47b01dc1c081e72b35f42036938 172 PANTHER PTHR36152 1 172 1.9E-141 T 22-04-2016 YPO0502 0c51a47b01dc1c081e72b35f42036938 172 Pfam PF05638 Type VI secretion system effector, Hcp 8 147 2.9E-39 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO0502 0c51a47b01dc1c081e72b35f42036938 172 Gene3D G3DSA:2.30.110.20 5 170 6.1E-49 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2305 220822f690122c33b3a758668574b1d6 317 PANTHER PTHR34156:SF2 2 316 1.7E-256 T 22-04-2016 YPO2305 220822f690122c33b3a758668574b1d6 317 Gene3D G3DSA:3.30.1660.10 111 176 3.3E-26 T 22-04-2016 IPR025543 Dodecin-like YPO2305 220822f690122c33b3a758668574b1d6 317 Gene3D G3DSA:3.30.1660.10 251 317 2.1E-25 T 22-04-2016 IPR025543 Dodecin-like YPO2305 220822f690122c33b3a758668574b1d6 317 Gene3D G3DSA:3.30.1660.10 25 91 9.5E-26 T 22-04-2016 IPR025543 Dodecin-like YPO2305 220822f690122c33b3a758668574b1d6 317 SUPERFAMILY SSF159871 109 179 3.4E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO2305 220822f690122c33b3a758668574b1d6 317 SUPERFAMILY SSF159871 241 317 2.62E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO2305 220822f690122c33b3a758668574b1d6 317 SUPERFAMILY SSF159871 3 94 3.92E-22 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO2305 220822f690122c33b3a758668574b1d6 317 PANTHER PTHR34156 2 316 1.7E-256 T 22-04-2016 YPO2305 220822f690122c33b3a758668574b1d6 317 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 7.2E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO2305 220822f690122c33b3a758668574b1d6 317 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 6.4E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO2305 220822f690122c33b3a758668574b1d6 317 Pfam PF07338 Protein of unknown function (DUF1471) 261 317 2.3E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO2305 220822f690122c33b3a758668574b1d6 317 PIRSF PIRSF014774 1 317 3.0E-185 T 22-04-2016 IPR025539 YdgH protein YPO1989 46d1cb38ab76a500db353e7eb1682162 720 PANTHER PTHR11102 221 267 6.6E-129 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 PANTHER PTHR11102 545 719 6.6E-129 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Gene3D G3DSA:2.20.110.10 394 502 1.0E-8 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Gene3D G3DSA:2.20.110.10 200 281 3.0E-4 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Gene3D G3DSA:2.20.110.10 283 393 2.2E-8 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Gene3D G3DSA:1.25.40.10 544 719 3.6E-47 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 SMART SM00671 635 670 7.4E-9 T 22-04-2016 IPR006597 Sel1-like repeat YPO1989 46d1cb38ab76a500db353e7eb1682162 720 SMART SM00671 599 634 5.4E-4 T 22-04-2016 IPR006597 Sel1-like repeat YPO1989 46d1cb38ab76a500db353e7eb1682162 720 SMART SM00671 567 598 1.6 T 22-04-2016 IPR006597 Sel1-like repeat YPO1989 46d1cb38ab76a500db353e7eb1682162 720 SMART SM00671 671 706 7.4E-8 T 22-04-2016 IPR006597 Sel1-like repeat YPO1989 46d1cb38ab76a500db353e7eb1682162 720 SUPERFAMILY SSF81901 569 712 2.7E-33 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 SUPERFAMILY SSF82185 353 460 1.09E-12 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF07661 MORN repeat variant 211 228 0.36 T 22-04-2016 IPR011652 MORN variant YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF07661 MORN repeat variant 284 304 0.075 T 22-04-2016 IPR011652 MORN variant YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF07661 MORN repeat variant 457 472 0.32 T 22-04-2016 IPR011652 MORN variant YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF07661 MORN repeat variant 307 326 0.017 T 22-04-2016 IPR011652 MORN variant YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF07661 MORN repeat variant 259 278 0.16 T 22-04-2016 IPR011652 MORN variant YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF07661 MORN repeat variant 357 376 0.016 T 22-04-2016 IPR011652 MORN variant YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF07661 MORN repeat variant 404 425 0.065 T 22-04-2016 IPR011652 MORN variant YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF07661 MORN repeat variant 384 400 0.43 T 22-04-2016 IPR011652 MORN variant YPO1989 46d1cb38ab76a500db353e7eb1682162 720 PANTHER PTHR11102:SF73 221 267 6.6E-129 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 PANTHER PTHR11102:SF73 545 719 6.6E-129 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 SUPERFAMILY SSF82185 229 352 1.44E-20 T 22-04-2016 YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF08238 Sel1 repeat 600 633 0.0085 T 22-04-2016 IPR006597 Sel1-like repeat YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF08238 Sel1 repeat 635 670 2.0E-7 T 22-04-2016 IPR006597 Sel1-like repeat YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF08238 Sel1 repeat 672 705 3.4E-5 T 22-04-2016 IPR006597 Sel1-like repeat YPO1989 46d1cb38ab76a500db353e7eb1682162 720 Pfam PF08238 Sel1 repeat 581 597 1.0 T 22-04-2016 IPR006597 Sel1-like repeat YPO1989 46d1cb38ab76a500db353e7eb1682162 720 SUPERFAMILY SSF82185 423 547 7.59E-18 T 22-04-2016 YPO1436 e1fc97f044c6f15561628321fdc8fe2a 168 SUPERFAMILY SSF52540 32 146 9.96E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1436 e1fc97f044c6f15561628321fdc8fe2a 168 Pfam PF03846 Cell division inhibitor SulA 9 120 1.4E-54 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 YPO1436 e1fc97f044c6f15561628321fdc8fe2a 168 PIRSF PIRSF003093 1 168 2.4E-87 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 YPO1436 e1fc97f044c6f15561628321fdc8fe2a 168 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 168 40.106 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 YPO1436 e1fc97f044c6f15561628321fdc8fe2a 168 Gene3D G3DSA:3.40.50.300 32 146 3.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1436 e1fc97f044c6f15561628321fdc8fe2a 168 PANTHER PTHR35369 1 168 5.9E-60 T 22-04-2016 YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 PANTHER PTHR26402:SF524 2 115 1.3E-38 T 22-04-2016 YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 SMART SM00448 2 112 1.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 SUPERFAMILY SSF52172 1 124 1.07E-32 T 22-04-2016 IPR011006 CheY-like superfamily YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 Pfam PF04397 LytTr DNA-binding domain 143 235 9.9E-25 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 Gene3D G3DSA:2.20.25.10 213 237 4.0E-6 T 22-04-2016 YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 Gene3D G3DSA:3.40.50.2300 1 117 2.2E-32 T 22-04-2016 YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 PANTHER PTHR26402 2 115 1.3E-38 T 22-04-2016 YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 SMART SM00850 142 236 4.1E-23 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 Gene3D G3DSA:2.40.50.40 134 198 4.9E-13 T 22-04-2016 YPO3287 ab513e5e9104442d22fb0eb4355ef74e 238 Pfam PF00072 Response regulator receiver domain 4 112 6.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 SUPERFAMILY SSF140490 343 433 7.72E-31 T 22-04-2016 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 SUPERFAMILY SSF142019 23 252 1.31E-85 T 22-04-2016 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 PANTHER PTHR11780 12 433 7.5E-223 T 22-04-2016 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 SMART SM00928 345 390 2.4E-21 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 432 2.9E-201 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 348 430 5.9E-26 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 358 369 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 SUPERFAMILY SSF142984 257 339 6.28E-22 T 22-04-2016 YPO2551 0299365bfc70e93586f992d66e8cb26e 461 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 61 233 3.7E-50 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain YPO2186 957f9b9ebfb489a97adc024be211b7b1 333 PANTHER PTHR24220:SF544 12 328 2.2E-201 T 22-04-2016 YPO2186 957f9b9ebfb489a97adc024be211b7b1 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 5.9E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO2186 957f9b9ebfb489a97adc024be211b7b1 333 PANTHER PTHR24220 12 328 2.2E-201 T 22-04-2016 YPO2186 957f9b9ebfb489a97adc024be211b7b1 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2186 957f9b9ebfb489a97adc024be211b7b1 333 Gene3D G3DSA:3.40.50.300 7 267 2.6E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2186 957f9b9ebfb489a97adc024be211b7b1 333 SUPERFAMILY SSF52540 22 263 5.45E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2186 957f9b9ebfb489a97adc024be211b7b1 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.3E-29 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO2186 957f9b9ebfb489a97adc024be211b7b1 333 Pfam PF00005 ABC transporter 40 191 5.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2186 957f9b9ebfb489a97adc024be211b7b1 333 SMART SM00382 48 241 4.1E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3255 61dd096b0d4c0411ec1beb42254e51da 217 Gene3D G3DSA:1.10.3720.10 10 212 1.9E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3255 61dd096b0d4c0411ec1beb42254e51da 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 210 8.4E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3255 61dd096b0d4c0411ec1beb42254e51da 217 SUPERFAMILY SSF161098 12 203 1.11E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3255 61dd096b0d4c0411ec1beb42254e51da 217 PANTHER PTHR30614 6 217 8.0E-86 T 22-04-2016 YPO3255 61dd096b0d4c0411ec1beb42254e51da 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 2.5E-30 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 76 96 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 227 252 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 203 224 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 96 115 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 182 202 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 57 76 4.5E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PANTHER PTHR30587:SF0 12 255 5.1E-116 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 Pfam PF00813 FliP family 59 249 2.3E-74 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 182 197 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 59 252 7.4E-73 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PANTHER PTHR30587 12 255 5.1E-116 T 22-04-2016 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 127 141 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 127 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 243 253 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 55 64 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO0709 cc6fbcee784704959b8cb520bcb84c80 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 175 187 1.5E-11 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO0454 4b6f2f1ea4c9dddc8ed64bdb40555b59 180 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.178 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase YPO0454 4b6f2f1ea4c9dddc8ed64bdb40555b59 180 PANTHER PTHR34699 1 174 2.7E-116 T 22-04-2016 YPO0454 4b6f2f1ea4c9dddc8ed64bdb40555b59 180 PANTHER PTHR34699:SF3 1 174 2.7E-116 T 22-04-2016 YPO0454 4b6f2f1ea4c9dddc8ed64bdb40555b59 180 SUPERFAMILY SSF52972 1 169 1.26E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPO0454 4b6f2f1ea4c9dddc8ed64bdb40555b59 180 Gene3D G3DSA:3.90.950.10 2 168 2.5E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPO0454 4b6f2f1ea4c9dddc8ed64bdb40555b59 180 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 3.1E-50 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase YPO0454 4b6f2f1ea4c9dddc8ed64bdb40555b59 180 Pfam PF01931 Protein of unknown function DUF84 7 166 4.0E-52 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 297 2.3E-9 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 PIRSF PIRSF005303 1 322 2.2E-90 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 Gene3D G3DSA:3.90.650.10 146 322 2.5E-53 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.582 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 Gene3D G3DSA:3.30.1330.10 3 140 1.5E-45 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 1.6E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 PANTHER PTHR30270:SF0 1 329 3.4E-155 T 22-04-2016 YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 PANTHER PTHR30270 1 329 3.4E-155 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 6.4E-116 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 SUPERFAMILY SSF55326 4 138 7.15E-34 T 22-04-2016 YPO3180 540b3025366b7d9155cc2d6f7fe35297 329 SUPERFAMILY SSF56042 143 303 4.78E-39 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2017 af3a46b32065ced1e54240d0d83835c0 360 SMART SM00937 63 178 5.6E-70 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 YPO2017 af3a46b32065ced1e54240d0d83835c0 360 PANTHER PTHR11075 1 356 6.5E-176 T 22-04-2016 YPO2017 af3a46b32065ced1e54240d0d83835c0 360 Pfam PF00472 RF-1 domain 216 321 9.6E-41 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPO2017 af3a46b32065ced1e54240d0d83835c0 360 Gene3D G3DSA:3.30.160.20 215 287 2.5E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YPO2017 af3a46b32065ced1e54240d0d83835c0 360 Pfam PF03462 PCRF domain 12 203 1.4E-74 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 YPO2017 af3a46b32065ced1e54240d0d83835c0 360 Gene3D G3DSA:1.20.58.410 6 93 3.9E-18 T 22-04-2016 YPO2017 af3a46b32065ced1e54240d0d83835c0 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 5.3E-172 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YPO2017 af3a46b32065ced1e54240d0d83835c0 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YPO2017 af3a46b32065ced1e54240d0d83835c0 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.506 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YPO2017 af3a46b32065ced1e54240d0d83835c0 360 SUPERFAMILY SSF75620 12 353 4.97E-135 T 22-04-2016 YPO2017 af3a46b32065ced1e54240d0d83835c0 360 PANTHER PTHR11075:SF9 1 356 6.5E-176 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 SMART SM00382 94 248 1.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0443 530293d5077ef74ecf579c674a791268 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 2.4E-232 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 YPO0443 530293d5077ef74ecf579c674a791268 460 Gene3D G3DSA:3.40.50.300 62 280 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0443 530293d5077ef74ecf579c674a791268 460 SUPERFAMILY SSF52540 71 290 4.59E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0443 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.2E-93 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.2E-93 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.2E-93 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.2E-93 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.2E-93 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.2E-93 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.2E-93 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 Pfam PF13481 AAA domain 88 225 2.0E-13 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 4.2E-9 T 22-04-2016 YPO0443 530293d5077ef74ecf579c674a791268 460 SUPERFAMILY SSF54211 258 272 2.35E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0443 530293d5077ef74ecf579c674a791268 460 SUPERFAMILY SSF54211 306 458 2.35E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0443 530293d5077ef74ecf579c674a791268 460 Gene3D G3DSA:3.30.230.10 288 457 6.8E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0443 530293d5077ef74ecf579c674a791268 460 PANTHER PTHR32472 1 457 2.1E-228 T 22-04-2016 YPO3269 6a9674f708f307586a8d7bca90f33438 388 PANTHER PTHR12029:SF57 1 384 1.8E-238 T 22-04-2016 YPO3269 6a9674f708f307586a8d7bca90f33438 388 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 150 222 1.8E-11 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YPO3269 6a9674f708f307586a8d7bca90f33438 388 Gene3D G3DSA:3.30.1330.30 141 218 2.5E-8 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YPO3269 6a9674f708f307586a8d7bca90f33438 388 SUPERFAMILY SSF75217 233 385 7.85E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPO3269 6a9674f708f307586a8d7bca90f33438 388 SMART SM00967 149 224 2.2E-8 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YPO3269 6a9674f708f307586a8d7bca90f33438 388 Gene3D G3DSA:3.40.1280.10 231 384 3.8E-40 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO3269 6a9674f708f307586a8d7bca90f33438 388 Pfam PF00588 SpoU rRNA Methylase family 240 377 5.0E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPO3269 6a9674f708f307586a8d7bca90f33438 388 PIRSF PIRSF006280 1 386 1.7E-197 T 22-04-2016 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPO3269 6a9674f708f307586a8d7bca90f33438 388 SUPERFAMILY SSF55315 142 219 2.19E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YPO3269 6a9674f708f307586a8d7bca90f33438 388 PANTHER PTHR12029 1 384 1.8E-238 T 22-04-2016 YPO3084 4a71d9f513d09238ebd59cd46707c02e 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 146 4.4E-24 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain YPO3084 4a71d9f513d09238ebd59cd46707c02e 149 SUPERFAMILY SSF141322 90 147 2.88E-5 T 22-04-2016 YPO3084 4a71d9f513d09238ebd59cd46707c02e 149 Gene3D G3DSA:2.40.50.140 91 146 1.7E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3084 4a71d9f513d09238ebd59cd46707c02e 149 PANTHER PTHR33507:SF3 1 149 2.3E-61 T 22-04-2016 YPO3084 4a71d9f513d09238ebd59cd46707c02e 149 PANTHER PTHR33507 1 149 2.3E-61 T 22-04-2016 YPO1321 5a77a0a549502d06385d067249986aa1 433 PANTHER PTHR35334 1 430 0.0 T 22-04-2016 YPO1321 5a77a0a549502d06385d067249986aa1 433 Pfam PF03222 Tryptophan/tyrosine permease family 32 356 5.0E-10 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YPO1321 5a77a0a549502d06385d067249986aa1 433 PANTHER PTHR35334:SF2 1 430 0.0 T 22-04-2016 YPO1321 5a77a0a549502d06385d067249986aa1 433 TIGRFAM TIGR00814 stp: serine transporter 20 419 1.3E-178 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 SUPERFAMILY SSF46548 7 157 1.1E-41 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.5E-37 T 22-04-2016 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.5E-37 T 22-04-2016 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.5E-37 T 22-04-2016 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.5E-37 T 22-04-2016 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.5E-37 T 22-04-2016 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 SUPERFAMILY SSF51971 145 401 1.06E-68 T 22-04-2016 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:3.40.50.720 401 471 1.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:3.40.50.720 150 236 1.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 4.7E-38 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PANTHER PTHR11938:SF93 23 472 0.0 T 22-04-2016 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 PANTHER PTHR11938 23 472 0.0 T 22-04-2016 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 4.0E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:1.10.1060.10 5 149 1.1E-47 T 22-04-2016 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 Gene3D G3DSA:3.50.50.60 237 400 2.4E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3558 69b0dc5bece62592cd93dc3d9d2d2ea5 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 1.0E-261 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 YPO4066 8427f806598536207bf4a15c9a7a43be 184 PANTHER PTHR37941 1 183 6.8E-56 T 22-04-2016 YPO4066 8427f806598536207bf4a15c9a7a43be 184 SUPERFAMILY SSF158668 6 170 2.22E-58 T 22-04-2016 YPO4066 8427f806598536207bf4a15c9a7a43be 184 Gene3D G3DSA:1.20.120.330 2 171 6.8E-79 T 22-04-2016 YPO4066 8427f806598536207bf4a15c9a7a43be 184 Pfam PF05068 Mannitol repressor 9 170 1.0E-63 T 22-04-2016 IPR007761 Mannitol repressor YPO0747 166f1c9d2ed6f8b97f73213d4169b413 303 Pfam PF00691 OmpA family 170 265 1.3E-12 T 22-04-2016 IPR006665 OmpA-like domain YPO0747 166f1c9d2ed6f8b97f73213d4169b413 303 PANTHER PTHR30329:SF6 4 297 7.9E-232 T 22-04-2016 YPO0747 166f1c9d2ed6f8b97f73213d4169b413 303 SUPERFAMILY SSF103088 155 273 2.09E-19 T 22-04-2016 IPR006665 OmpA-like domain YPO0747 166f1c9d2ed6f8b97f73213d4169b413 303 Gene3D G3DSA:3.30.1330.60 150 273 7.1E-15 T 22-04-2016 IPR006665 OmpA-like domain YPO0747 166f1c9d2ed6f8b97f73213d4169b413 303 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 17 67 5.5E-14 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain YPO0747 166f1c9d2ed6f8b97f73213d4169b413 303 PANTHER PTHR30329 4 297 7.9E-232 T 22-04-2016 YPO2679 db1047a61ae4d80e1e84d1aec7a5a17a 453 PANTHER PTHR33989 1 452 6.8E-215 T 22-04-2016 YPO2679 db1047a61ae4d80e1e84d1aec7a5a17a 453 PIRSF PIRSF006351 1 446 1.6E-126 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 YPO2679 db1047a61ae4d80e1e84d1aec7a5a17a 453 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 438 4.6E-155 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 YPO2679 db1047a61ae4d80e1e84d1aec7a5a17a 453 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 438 4.6E-155 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 YPO2679 db1047a61ae4d80e1e84d1aec7a5a17a 453 Pfam PF02378 Phosphotransferase system, EIIC 30 363 2.8E-44 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPO2679 db1047a61ae4d80e1e84d1aec7a5a17a 453 PANTHER PTHR33989:SF4 1 452 6.8E-215 T 22-04-2016 YPO1895 4039277dcd145d3964cef0d475e612bf 275 Gene3D G3DSA:1.10.3720.10 11 263 4.9E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1895 4039277dcd145d3964cef0d475e612bf 275 PANTHER PTHR32243 11 275 6.4E-139 T 22-04-2016 YPO1895 4039277dcd145d3964cef0d475e612bf 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 270 2.8E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1895 4039277dcd145d3964cef0d475e612bf 275 PANTHER PTHR32243:SF11 11 275 6.4E-139 T 22-04-2016 YPO1895 4039277dcd145d3964cef0d475e612bf 275 SUPERFAMILY SSF161098 11 275 5.23E-69 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 PANTHER PTHR18895:SF73 41 242 4.7E-94 T 22-04-2016 YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 SUPERFAMILY SSF53335 19 206 5.08E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 PANTHER PTHR18895 41 242 4.7E-94 T 22-04-2016 YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 123 135 3.3E-5 T 22-04-2016 YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 153 177 3.3E-5 T 22-04-2016 YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 55 69 3.3E-5 T 22-04-2016 YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 18 252 56.536 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 Pfam PF05175 Methyltransferase small domain 48 183 4.3E-15 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 126 132 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO2709 a1d6216eefb9d84b1930a4e1448cdf44 252 Gene3D G3DSA:3.40.50.150 39 244 3.8E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0152 641701b6900493686a5790cade6a71a4 362 Gene3D G3DSA:3.40.50.1970 2 172 2.8E-67 T 22-04-2016 YPO0152 641701b6900493686a5790cade6a71a4 362 Gene3D G3DSA:1.20.1090.10 173 355 8.2E-67 T 22-04-2016 YPO0152 641701b6900493686a5790cade6a71a4 362 Pfam PF01761 3-dehydroquinate synthase 67 326 1.2E-108 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO0152 641701b6900493686a5790cade6a71a4 362 SUPERFAMILY SSF56796 4 357 1.7E-115 T 22-04-2016 YPO0152 641701b6900493686a5790cade6a71a4 362 PIRSF PIRSF001455 11 359 3.4E-105 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO0152 641701b6900493686a5790cade6a71a4 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 359 43.389 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO0152 641701b6900493686a5790cade6a71a4 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 2.0E-119 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO0152 641701b6900493686a5790cade6a71a4 362 PANTHER PTHR21090 1 361 4.9E-214 T 22-04-2016 YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 Pfam PF04337 Protein of unknown function, DUF480 5 156 5.7E-62 T 22-04-2016 IPR007432 Protein of unknown function DUF480 YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 Gene3D G3DSA:1.10.10.10 3 85 4.4E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 229 33.616 T 22-04-2016 IPR007432 Protein of unknown function DUF480 YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 237 354 1.9E-25 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 SUPERFAMILY SSF55347 359 498 4.9E-45 T 22-04-2016 YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 PANTHER PTHR22604:SF126 197 536 7.4E-165 T 22-04-2016 YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 SUPERFAMILY SSF46785 88 169 1.36E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 Gene3D G3DSA:1.10.10.10 93 169 3.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 SUPERFAMILY SSF51735 236 370 2.28E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 Gene3D G3DSA:3.30.360.10 363 536 6.5E-67 T 22-04-2016 YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 Gene3D G3DSA:3.40.50.720 233 362 4.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 SUPERFAMILY SSF46785 2 82 9.6E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2042 c2c8fb1cc5f0ecaa2c03c2e6cf3f9797 536 PANTHER PTHR22604 197 536 7.4E-165 T 22-04-2016 YPO1238 ca545bcbeb33ac2d9e5361e7edd5e1a7 250 SUPERFAMILY SSF51658 2 240 5.25E-66 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1238 ca545bcbeb33ac2d9e5361e7edd5e1a7 250 PANTHER PTHR12110:SF12 1 242 2.9E-150 T 22-04-2016 YPO1238 ca545bcbeb33ac2d9e5361e7edd5e1a7 250 PANTHER PTHR12110 1 242 2.9E-150 T 22-04-2016 YPO1238 ca545bcbeb33ac2d9e5361e7edd5e1a7 250 Gene3D G3DSA:3.20.20.150 2 240 4.7E-68 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1238 ca545bcbeb33ac2d9e5361e7edd5e1a7 250 PIRSF PIRSF006241 1 247 1.1E-80 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 YPO1238 ca545bcbeb33ac2d9e5361e7edd5e1a7 250 Pfam PF01261 Xylose isomerase-like TIM barrel 7 205 5.5E-28 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3792 df61ddc4447ac9f2a002b5d36f16cf29 249 Gene3D G3DSA:3.20.20.190 3 242 1.9E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO3792 df61ddc4447ac9f2a002b5d36f16cf29 249 PANTHER PTHR23344 2 242 3.8E-83 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPO3792 df61ddc4447ac9f2a002b5d36f16cf29 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 240 1.8E-39 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPO3792 df61ddc4447ac9f2a002b5d36f16cf29 249 PANTHER PTHR23344:SF20 2 242 3.8E-83 T 22-04-2016 YPO3792 df61ddc4447ac9f2a002b5d36f16cf29 249 SUPERFAMILY SSF51695 6 242 1.23E-62 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 24 342 5.6E-76 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 Pfam PF14310 Fibronectin type III-like domain 641 710 8.3E-16 T 22-04-2016 IPR026891 Fibronectin type III-like domain YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 PANTHER PTHR30620 68 723 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 PANTHER PTHR30620 4 39 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 SUPERFAMILY SSF51445 3 380 4.42E-110 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 Gene3D G3DSA:3.20.20.300 3 359 1.8E-110 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 Gene3D G3DSA:3.40.50.1700 367 607 2.1E-62 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 SUPERFAMILY SSF52279 381 607 4.84E-48 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 SMART SM01217 641 710 5.3E-24 T 22-04-2016 IPR026891 Fibronectin type III-like domain YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 PANTHER PTHR30620:SF5 68 723 0.0 T 22-04-2016 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 PANTHER PTHR30620:SF5 4 39 0.0 T 22-04-2016 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 111 130 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 264 282 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 194 210 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 157 173 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 PRINTS PR00133 Glycosyl hydrolase family 3 signature 92 108 2.1E-20 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO0616 159c0cee92e10c85d218cbfa382f3bbb 727 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 381 604 1.5E-42 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YPO1351 ca1104f7499df044cb9471035057c6ab 243 Gene3D G3DSA:3.40.190.10 203 242 4.6E-46 T 22-04-2016 YPO1351 ca1104f7499df044cb9471035057c6ab 243 Gene3D G3DSA:3.40.190.10 20 108 4.6E-46 T 22-04-2016 YPO1351 ca1104f7499df044cb9471035057c6ab 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPO1351 ca1104f7499df044cb9471035057c6ab 243 PANTHER PTHR18966 4 243 2.9E-125 T 22-04-2016 YPO1351 ca1104f7499df044cb9471035057c6ab 243 SMART SM00062 22 241 7.8E-87 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO1351 ca1104f7499df044cb9471035057c6ab 243 SMART SM00079 22 243 9.2E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YPO1351 ca1104f7499df044cb9471035057c6ab 243 SUPERFAMILY SSF53850 1 242 4.93E-73 T 22-04-2016 YPO1351 ca1104f7499df044cb9471035057c6ab 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 241 1.6E-90 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 YPO1351 ca1104f7499df044cb9471035057c6ab 243 Gene3D G3DSA:3.40.190.10 110 201 1.0E-28 T 22-04-2016 YPO1351 ca1104f7499df044cb9471035057c6ab 243 PANTHER PTHR18966:SF194 4 243 2.9E-125 T 22-04-2016 YPO1351 ca1104f7499df044cb9471035057c6ab 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.1E-70 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.844 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 SMART SM01400 4 121 5.7E-76 T 22-04-2016 YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 6.2E-127 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 2.0E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 PANTHER PTHR10210:SF41 2 315 2.2E-189 T 22-04-2016 YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 PANTHER PTHR10210 2 315 2.2E-189 T 22-04-2016 YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 SUPERFAMILY SSF53271 69 306 2.5E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 Gene3D G3DSA:3.40.50.2020 160 285 3.4E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 Gene3D G3DSA:3.40.50.2020 2 159 1.2E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO2013 a13c46a180fedb5b34ec513b2898a05b 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 2.1E-30 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YPO3849 fca16cdaad2657b3c20f37caff649821 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 3.4E-78 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 PANTHER PTHR11557 1 310 2.7E-171 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 Gene3D G3DSA:3.30.160.40 221 305 2.0E-29 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.498 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 Gene3D G3DSA:3.40.190.10 111 199 5.8E-40 T 22-04-2016 YPO3849 fca16cdaad2657b3c20f37caff649821 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 SUPERFAMILY SSF54782 220 309 7.85E-29 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 SUPERFAMILY SSF53850 5 219 9.99E-86 T 22-04-2016 YPO3849 fca16cdaad2657b3c20f37caff649821 313 PIRSF PIRSF001438 1 311 3.5E-122 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.5E-113 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.7E-22 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 3.0E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3849 fca16cdaad2657b3c20f37caff649821 313 Gene3D G3DSA:3.40.190.10 3 110 3.2E-48 T 22-04-2016 YPO2979 350923cacb94c2bf04148533c074d060 292 SUPERFAMILY SSF46785 6 84 1.68E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2979 350923cacb94c2bf04148533c074d060 292 Gene3D G3DSA:3.40.190.10 111 188 1.4E-10 T 22-04-2016 YPO2979 350923cacb94c2bf04148533c074d060 292 Gene3D G3DSA:3.40.190.10 189 243 3.9E-6 T 22-04-2016 YPO2979 350923cacb94c2bf04148533c074d060 292 PANTHER PTHR30126:SF29 2 286 1.1E-126 T 22-04-2016 YPO2979 350923cacb94c2bf04148533c074d060 292 SUPERFAMILY SSF53850 95 288 6.88E-28 T 22-04-2016 YPO2979 350923cacb94c2bf04148533c074d060 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2979 350923cacb94c2bf04148533c074d060 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2979 350923cacb94c2bf04148533c074d060 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2979 350923cacb94c2bf04148533c074d060 292 Pfam PF03466 LysR substrate binding domain 91 286 1.8E-26 T 22-04-2016 IPR005119 LysR, substrate-binding YPO2979 350923cacb94c2bf04148533c074d060 292 Gene3D G3DSA:1.10.10.10 4 81 6.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2979 350923cacb94c2bf04148533c074d060 292 PANTHER PTHR30126 2 286 1.1E-126 T 22-04-2016 YPO2979 350923cacb94c2bf04148533c074d060 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 Gene3D G3DSA:2.30.42.10 296 392 6.8E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 479 1.4E-163 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 SUPERFAMILY SSF50156 276 384 2.66E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 SUPERFAMILY SSF50156 412 477 3.81E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PRINTS PR00834 HtrA/DegQ protease family signature 191 215 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PRINTS PR00834 HtrA/DegQ protease family signature 334 346 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PRINTS PR00834 HtrA/DegQ protease family signature 150 170 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 5.0E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 Gene3D G3DSA:2.30.42.10 413 478 1.5E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 Pfam PF13365 Trypsin-like peptidase domain 119 255 2.2E-32 T 22-04-2016 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 400 470 3.8E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 Gene3D G3DSA:2.40.10.10 38 182 1.2E-35 T 22-04-2016 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 Gene3D G3DSA:2.40.10.10 183 295 1.0E-42 T 22-04-2016 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 SMART SM00228 401 473 5.1E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 SMART SM00228 294 376 5.5E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PANTHER PTHR22939 6 61 7.5E-268 T 22-04-2016 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PANTHER PTHR22939 84 92 7.5E-268 T 22-04-2016 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PANTHER PTHR22939 110 410 7.5E-268 T 22-04-2016 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PANTHER PTHR22939:SF84 6 61 7.5E-268 T 22-04-2016 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PANTHER PTHR22939:SF84 84 92 7.5E-268 T 22-04-2016 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 PANTHER PTHR22939:SF84 110 410 7.5E-268 T 22-04-2016 YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 SUPERFAMILY SSF50494 3 59 2.65E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 SUPERFAMILY SSF50494 116 303 2.65E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPO3382 02ad6a088413f5baf7a1b318597d08b6 481 Pfam PF13180 PDZ domain 296 385 6.2E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1696 9eee3d82bfa3e5c3375c386b10bc3d3a 815 Pfam PF00577 Outer membrane usher protein 234 712 9.0E-30 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1696 9eee3d82bfa3e5c3375c386b10bc3d3a 815 Pfam PF13953 PapC C-terminal domain 739 801 1.3E-10 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPO1696 9eee3d82bfa3e5c3375c386b10bc3d3a 815 PANTHER PTHR30451 1 815 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1696 9eee3d82bfa3e5c3375c386b10bc3d3a 815 PANTHER PTHR30451:SF5 1 815 0.0 T 22-04-2016 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 SUPERFAMILY SSF53822 26 368 1.61E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 Gene3D G3DSA:3.40.50.2300 26 225 1.3E-65 T 22-04-2016 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 6.9E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 Pfam PF13458 Periplasmic binding protein 27 353 9.1E-64 T 22-04-2016 IPR028081 Leucine-binding protein domain YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 PANTHER PTHR30483 5 361 9.6E-230 T 22-04-2016 YPO3808 b5fbd8dedf93185312f8a2df89534dbb 371 PANTHER PTHR30483:SF16 5 361 9.6E-230 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO1272 d6e87075e7b2d148bdc5cdb12b33ef57 366 PANTHER PTHR30465 2 45 1.1E-227 T 22-04-2016 YPO1272 d6e87075e7b2d148bdc5cdb12b33ef57 366 SUPERFAMILY SSF161098 130 346 6.67E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1272 d6e87075e7b2d148bdc5cdb12b33ef57 366 PANTHER PTHR30465:SF66 71 362 1.1E-227 T 22-04-2016 YPO1272 d6e87075e7b2d148bdc5cdb12b33ef57 366 Gene3D G3DSA:1.10.3720.10 130 352 2.2E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1272 d6e87075e7b2d148bdc5cdb12b33ef57 366 PANTHER PTHR30465 71 362 1.1E-227 T 22-04-2016 YPO1272 d6e87075e7b2d148bdc5cdb12b33ef57 366 PANTHER PTHR30465:SF66 2 45 1.1E-227 T 22-04-2016 YPO1272 d6e87075e7b2d148bdc5cdb12b33ef57 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 153 360 9.6E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1880 fd8b8aab9509e7a95b7bf4cd36ac734b 99 SUPERFAMILY SSF160719 16 81 9.55E-25 T 22-04-2016 YPO1880 fd8b8aab9509e7a95b7bf4cd36ac734b 99 Gene3D G3DSA:3.10.450.40 11 82 1.1E-28 T 22-04-2016 YPO1880 fd8b8aab9509e7a95b7bf4cd36ac734b 99 PANTHER PTHR35862 5 98 1.1E-33 T 22-04-2016 YPO1880 fd8b8aab9509e7a95b7bf4cd36ac734b 99 Pfam PF04965 Gene 25-like lysozyme 20 81 1.8E-13 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO1880 fd8b8aab9509e7a95b7bf4cd36ac734b 99 PANTHER PTHR35862:SF2 5 98 1.1E-33 T 22-04-2016 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 8.8E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type YPO0475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.1E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 SUPERFAMILY SSF47323 652 929 2.24E-79 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 3.8E-298 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 Gene3D G3DSA:3.40.50.620 403 637 1.5E-133 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0475 4015c46e21954b3adaabcd4df6def05a 938 Gene3D G3DSA:3.40.50.620 17 205 1.5E-133 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0475 4015c46e21954b3adaabcd4df6def05a 938 Gene3D G3DSA:1.10.730.10 642 789 7.6E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 PANTHER PTHR11946:SF11 282 935 0.0 T 22-04-2016 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 PANTHER PTHR11946:SF11 6 259 0.0 T 22-04-2016 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 SUPERFAMILY SSF52374 403 647 4.06E-136 T 22-04-2016 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 SUPERFAMILY SSF52374 3 202 4.06E-136 T 22-04-2016 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 641 2.7E-229 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 PANTHER PTHR11946 282 935 0.0 T 22-04-2016 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 PANTHER PTHR11946 6 259 0.0 T 22-04-2016 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 Gene3D G3DSA:3.90.740.10 206 389 4.4E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.37 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 3.9E-30 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 YPO0475 4015c46e21954b3adaabcd4df6def05a 938 SUPERFAMILY SSF50677 204 403 3.03E-54 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 SMART SM01091 205 283 1.8E-29 T 22-04-2016 IPR005170 Transporter-associated domain YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 SUPERFAMILY SSF54631 66 202 3.79E-32 T 22-04-2016 YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 Gene3D G3DSA:3.30.465.10 198 283 2.2E-31 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 Gene3D G3DSA:3.10.580.10 55 197 1.7E-22 T 22-04-2016 YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 Pfam PF00571 CBS domain 143 189 1.1E-4 T 22-04-2016 IPR000644 CBS domain YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 Pfam PF00571 CBS domain 69 123 4.9E-8 T 22-04-2016 IPR000644 CBS domain YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 PANTHER PTHR22777 18 292 8.2E-129 T 22-04-2016 YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 SMART SM00116 141 189 3.9 T 22-04-2016 IPR000644 CBS domain YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 SMART SM00116 78 127 3.9 T 22-04-2016 IPR000644 CBS domain YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 SUPERFAMILY SSF56176 203 289 1.12E-23 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 PANTHER PTHR22777:SF17 18 292 8.2E-129 T 22-04-2016 YPO2617 fcac28571f59bceb9dbff9163dd502b4 292 Pfam PF03471 Transporter associated domain 206 281 8.3E-22 T 22-04-2016 IPR005170 Transporter-associated domain YPO2263 959ecda24e00551adce1a62f9ec836b5 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 382 5.4E-119 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PIRSF PIRSF001480 1 391 4.4E-107 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 Gene3D G3DSA:2.60.120.10 288 378 1.2E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO2263 959ecda24e00551adce1a62f9ec836b5 391 Gene3D G3DSA:2.60.120.10 6 140 7.7E-66 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO2263 959ecda24e00551adce1a62f9ec836b5 391 Gene3D G3DSA:2.60.120.10 238 273 7.7E-66 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 4.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 4.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 4.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 4.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 4.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 4.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 4.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 4.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 Gene3D G3DSA:1.10.441.10 274 287 5.8E-23 T 22-04-2016 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 Gene3D G3DSA:1.10.441.10 141 231 5.8E-23 T 22-04-2016 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 Pfam PF01238 Phosphomannose isomerase type I 1 355 7.0E-100 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PANTHER PTHR10309 1 374 1.1E-141 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 PANTHER PTHR10309:SF0 1 374 1.1E-141 T 22-04-2016 YPO2263 959ecda24e00551adce1a62f9ec836b5 391 SUPERFAMILY SSF51182 1 374 2.0E-102 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO3549 340e6b3e0cad4db6a2d59eece76c899f 117 Gene3D G3DSA:3.40.1350.10 10 116 8.2E-36 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 YPO3549 340e6b3e0cad4db6a2d59eece76c899f 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 1.0E-38 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 YPO3549 340e6b3e0cad4db6a2d59eece76c899f 117 PANTHER PTHR34039 1 117 3.8E-43 T 22-04-2016 YPO3549 340e6b3e0cad4db6a2d59eece76c899f 117 PANTHER PTHR34039:SF1 1 117 3.8E-43 T 22-04-2016 YPO3549 340e6b3e0cad4db6a2d59eece76c899f 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 115 23.456 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 YPO3549 340e6b3e0cad4db6a2d59eece76c899f 117 Pfam PF02021 Uncharacterised protein family UPF0102 10 102 1.0E-23 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 YPO3549 340e6b3e0cad4db6a2d59eece76c899f 117 SUPERFAMILY SSF52980 4 112 5.79E-21 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 33.898 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 SUPERFAMILY SSF53681 131 283 4.14E-32 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 PANTHER PTHR21198 19 287 6.1E-117 T 22-04-2016 YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 31 239 8.3E-25 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 SUPERFAMILY SSF53681 29 129 4.71E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 PANTHER PTHR21198:SF2 19 287 6.1E-117 T 22-04-2016 YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 29 274 2.4E-84 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3909 909721c1d6736dcf29a97fff3e0a1bc7 287 Gene3D G3DSA:3.40.50.1860 29 195 4.5E-48 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3201 2a589e766951e6a0b0641c0317a20986 463 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPO3201 2a589e766951e6a0b0641c0317a20986 463 PANTHER PTHR11785:SF352 1 463 0.0 T 22-04-2016 YPO3201 2a589e766951e6a0b0641c0317a20986 463 PANTHER PTHR11785 1 463 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO3201 2a589e766951e6a0b0641c0317a20986 463 PIRSF PIRSF006060 4 463 7.3E-72 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO3201 2a589e766951e6a0b0641c0317a20986 463 Pfam PF00324 Amino acid permease 17 455 6.9E-108 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPO1765 a943112d4445c58251fc9f2e05286690 132 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 3 123 6.0E-22 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 YPO1765 a943112d4445c58251fc9f2e05286690 132 SUPERFAMILY SSF55331 3 125 2.32E-42 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily YPO1765 a943112d4445c58251fc9f2e05286690 132 PANTHER PTHR37950 2 130 1.3E-50 T 22-04-2016 YPO1765 a943112d4445c58251fc9f2e05286690 132 PANTHER PTHR37950:SF1 2 130 1.3E-50 T 22-04-2016 YPO1765 a943112d4445c58251fc9f2e05286690 132 Gene3D G3DSA:3.30.429.10 3 126 1.9E-45 T 22-04-2016 YPO4110 77ef118fbdcdfa8002e7697274ed57ba 245 PANTHER PTHR30085 14 245 6.6E-67 T 22-04-2016 YPO4110 77ef118fbdcdfa8002e7697274ed57ba 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 229 6.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4110 77ef118fbdcdfa8002e7697274ed57ba 245 SUPERFAMILY SSF161098 17 226 1.96E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4110 77ef118fbdcdfa8002e7697274ed57ba 245 Gene3D G3DSA:1.10.3720.10 17 239 1.4E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4110 77ef118fbdcdfa8002e7697274ed57ba 245 PANTHER PTHR30085:SF1 14 245 6.6E-67 T 22-04-2016 YPO4110 77ef118fbdcdfa8002e7697274ed57ba 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 85 2.6E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO2120 6b6a900ac4d9e18324d3bcf3f7d48bce 113 Pfam PF05939 Phage minor tail protein 4 111 2.0E-32 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail YPO2283 56c015148e9b6013aa89e6db15c8f610 338 SMART SM00354 1 71 1.1E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 PANTHER PTHR30146:SF48 1 331 1.8E-119 T 22-04-2016 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.0E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 Gene3D G3DSA:1.10.260.40 2 58 2.0E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 SUPERFAMILY SSF47413 2 56 5.23E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 Pfam PF13377 Periplasmic binding protein-like domain 169 329 2.9E-33 T 22-04-2016 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 SUPERFAMILY SSF53822 61 331 3.26E-79 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO2283 56c015148e9b6013aa89e6db15c8f610 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.3E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.3E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 PANTHER PTHR30146 1 331 1.8E-119 T 22-04-2016 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 Gene3D G3DSA:3.40.50.2300 59 166 9.6E-35 T 22-04-2016 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 Gene3D G3DSA:3.40.50.2300 167 330 3.1E-53 T 22-04-2016 YPO2283 56c015148e9b6013aa89e6db15c8f610 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO1038 07ed166dbc220093cd47280be381b8ae 257 SUPERFAMILY SSF55120 2 237 2.56E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1038 07ed166dbc220093cd47280be381b8ae 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1038 07ed166dbc220093cd47280be381b8ae 257 PANTHER PTHR11079 3 245 9.4E-95 T 22-04-2016 YPO1038 07ed166dbc220093cd47280be381b8ae 257 Pfam PF00849 RNA pseudouridylate synthase 10 170 9.3E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1038 07ed166dbc220093cd47280be381b8ae 257 PANTHER PTHR11079:SF60 3 245 9.4E-95 T 22-04-2016 YPO3816 a7552cc8a8ec0e5ef82bd40f0a466252 220 PIRSF PIRSF004553 22 202 2.9E-59 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO3816 a7552cc8a8ec0e5ef82bd40f0a466252 220 Pfam PF03602 Conserved hypothetical protein 95 23 198 5.2E-62 T 22-04-2016 YPO3816 a7552cc8a8ec0e5ef82bd40f0a466252 220 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 135 141 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO3816 a7552cc8a8ec0e5ef82bd40f0a466252 220 PANTHER PTHR18895 22 213 2.5E-59 T 22-04-2016 YPO3816 a7552cc8a8ec0e5ef82bd40f0a466252 220 SUPERFAMILY SSF53335 22 199 5.58E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3816 a7552cc8a8ec0e5ef82bd40f0a466252 220 Gene3D G3DSA:3.40.50.150 15 202 4.8E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3816 a7552cc8a8ec0e5ef82bd40f0a466252 220 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 18 200 1.0E-64 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO3816 a7552cc8a8ec0e5ef82bd40f0a466252 220 PANTHER PTHR18895:SF60 22 213 2.5E-59 T 22-04-2016 YPO2232 0f11ad49a568abbc0a3bc6ad4cadc68a 221 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 2.8E-81 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO2232 0f11ad49a568abbc0a3bc6ad4cadc68a 221 Pfam PF00923 Transaldolase 3 206 2.0E-43 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO2232 0f11ad49a568abbc0a3bc6ad4cadc68a 221 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO2232 0f11ad49a568abbc0a3bc6ad4cadc68a 221 SUPERFAMILY SSF51569 1 216 4.61E-63 T 22-04-2016 YPO2232 0f11ad49a568abbc0a3bc6ad4cadc68a 221 Gene3D G3DSA:3.20.20.70 1 214 7.2E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2232 0f11ad49a568abbc0a3bc6ad4cadc68a 221 PANTHER PTHR10683:SF15 1 216 1.2E-150 T 22-04-2016 YPO2232 0f11ad49a568abbc0a3bc6ad4cadc68a 221 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO2232 0f11ad49a568abbc0a3bc6ad4cadc68a 221 PANTHER PTHR10683 1 216 1.2E-150 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO1495 84140f88603c16dd124ced7bf7d14382 424 Pfam PF00994 Probable molybdopterin binding domain 183 319 4.4E-26 T 22-04-2016 IPR001453 MoaB/Mog domain YPO1495 84140f88603c16dd124ced7bf7d14382 424 SUPERFAMILY SSF63867 330 410 2.22E-24 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1495 84140f88603c16dd124ced7bf7d14382 424 SMART SM00852 183 320 1.4E-42 T 22-04-2016 IPR001453 MoaB/Mog domain YPO1495 84140f88603c16dd124ced7bf7d14382 424 Gene3D G3DSA:2.40.340.10 332 404 5.5E-34 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1495 84140f88603c16dd124ced7bf7d14382 424 PANTHER PTHR10192:SF11 1 421 2.1E-279 T 22-04-2016 YPO1495 84140f88603c16dd124ced7bf7d14382 424 Gene3D G3DSA:3.90.105.10 145 165 1.4E-19 T 22-04-2016 YPO1495 84140f88603c16dd124ced7bf7d14382 424 Gene3D G3DSA:3.90.105.10 29 52 1.4E-19 T 22-04-2016 YPO1495 84140f88603c16dd124ced7bf7d14382 424 Gene3D G3DSA:2.170.190.11 53 144 1.2E-30 T 22-04-2016 YPO1495 84140f88603c16dd124ced7bf7d14382 424 Pfam PF03454 MoeA C-terminal region (domain IV) 334 406 4.8E-19 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1495 84140f88603c16dd124ced7bf7d14382 424 SUPERFAMILY SSF53218 180 327 8.38E-43 T 22-04-2016 IPR001453 MoaB/Mog domain YPO1495 84140f88603c16dd124ced7bf7d14382 424 PANTHER PTHR10192 1 421 2.1E-279 T 22-04-2016 YPO1495 84140f88603c16dd124ced7bf7d14382 424 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 1.8E-32 T 22-04-2016 IPR001453 MoaB/Mog domain YPO1495 84140f88603c16dd124ced7bf7d14382 424 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 YPO1495 84140f88603c16dd124ced7bf7d14382 424 SUPERFAMILY SSF63882 9 178 1.44E-54 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1495 84140f88603c16dd124ced7bf7d14382 424 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 170 1.1E-37 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1495 84140f88603c16dd124ced7bf7d14382 424 Gene3D G3DSA:3.40.980.10 166 330 2.6E-62 T 22-04-2016 IPR001453 MoaB/Mog domain YPO2204 6722c1f6860f31831fad201c62bf1c37 396 Gene3D G3DSA:3.40.50.1100 96 175 8.2E-22 T 22-04-2016 YPO2204 6722c1f6860f31831fad201c62bf1c37 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 2.3E-50 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO2204 6722c1f6860f31831fad201c62bf1c37 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 1.3E-188 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPO2204 6722c1f6860f31831fad201c62bf1c37 396 SUPERFAMILY SSF53686 4 389 2.1E-141 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO2204 6722c1f6860f31831fad201c62bf1c37 396 Gene3D G3DSA:3.40.50.1100 176 391 4.5E-92 T 22-04-2016 YPO2204 6722c1f6860f31831fad201c62bf1c37 396 PANTHER PTHR10314 6 395 1.8E-225 T 22-04-2016 YPO2204 6722c1f6860f31831fad201c62bf1c37 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.011 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPO2204 6722c1f6860f31831fad201c62bf1c37 396 PANTHER PTHR10314:SF3 6 395 1.8E-225 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPO2204 6722c1f6860f31831fad201c62bf1c37 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPO2204 6722c1f6860f31831fad201c62bf1c37 396 PIRSF PIRSF001413 1 396 6.6E-170 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPO3334 d6171bd7c2f34ac5790a8bcc4ff156bd 498 PANTHER PTHR10196:SF73 1 494 0.0 T 22-04-2016 YPO3334 d6171bd7c2f34ac5790a8bcc4ff156bd 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 255 2.3E-64 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPO3334 d6171bd7c2f34ac5790a8bcc4ff156bd 498 Gene3D G3DSA:3.30.420.40 264 495 1.0E-28 T 22-04-2016 YPO3334 d6171bd7c2f34ac5790a8bcc4ff156bd 498 PANTHER PTHR10196 1 494 0.0 T 22-04-2016 YPO3334 d6171bd7c2f34ac5790a8bcc4ff156bd 498 PIRSF PIRSF000538 2 498 3.6E-76 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO3334 d6171bd7c2f34ac5790a8bcc4ff156bd 498 SUPERFAMILY SSF53067 259 496 1.53E-40 T 22-04-2016 YPO3334 d6171bd7c2f34ac5790a8bcc4ff156bd 498 Gene3D G3DSA:3.30.420.40 1 253 1.8E-57 T 22-04-2016 YPO3334 d6171bd7c2f34ac5790a8bcc4ff156bd 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 266 448 1.2E-16 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPO3334 d6171bd7c2f34ac5790a8bcc4ff156bd 498 SUPERFAMILY SSF53067 4 255 1.02E-56 T 22-04-2016 YPO0789 86772d879e2489a080c8090410a5f053 228 SMART SM00927 59 157 3.6E-66 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YPO0789 86772d879e2489a080c8090410a5f053 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 152.64 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 YPO0789 86772d879e2489a080c8090410a5f053 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 6.0E-106 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 YPO0789 86772d879e2489a080c8090410a5f053 228 SUPERFAMILY SSF52980 9 227 2.09E-80 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPO0789 86772d879e2489a080c8090410a5f053 228 Gene3D G3DSA:3.40.600.10 8 226 1.0E-77 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YPO0789 86772d879e2489a080c8090410a5f053 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 6.4E-34 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YPO3667 0dc480732a47a4358e2da933e8dfe827 162 PANTHER PTHR37484 1 162 4.0E-75 T 22-04-2016 YPO3667 0dc480732a47a4358e2da933e8dfe827 162 Pfam PF04093 rod shape-determining protein MreD 7 154 1.1E-43 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 YPO3667 0dc480732a47a4358e2da933e8dfe827 162 PIRSF PIRSF018472 2 162 9.6E-58 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type YPO3667 0dc480732a47a4358e2da933e8dfe827 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 7.5E-43 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 YPO0811 d96a48397f5668c1e45cc811a13fc28b 114 PANTHER PTHR38779:SF2 1 114 6.9E-51 T 22-04-2016 YPO0811 d96a48397f5668c1e45cc811a13fc28b 114 Pfam PF02501 Type II secretion system (T2SS), protein I 32 109 8.3E-19 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 YPO0811 d96a48397f5668c1e45cc811a13fc28b 114 PANTHER PTHR38779 1 114 6.9E-51 T 22-04-2016 YPO0811 d96a48397f5668c1e45cc811a13fc28b 114 TIGRFAM TIGR01707 gspI: type II secretion system protein I 1 97 9.5E-18 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 YPO0811 d96a48397f5668c1e45cc811a13fc28b 114 Gene3D G3DSA:3.30.1300.30 25 109 1.4E-25 T 22-04-2016 YPO0811 d96a48397f5668c1e45cc811a13fc28b 114 SUPERFAMILY SSF54523 30 109 2.83E-21 T 22-04-2016 YPO3574 d880a82fb032e010a0422f32487d98c3 260 Pfam PF02405 Permease MlaE 45 256 4.7E-76 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 YPO3574 d880a82fb032e010a0422f32487d98c3 260 PANTHER PTHR30188:SF4 1 260 1.2E-129 T 22-04-2016 YPO3574 d880a82fb032e010a0422f32487d98c3 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 2.2E-104 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YPO3574 d880a82fb032e010a0422f32487d98c3 260 PANTHER PTHR30188 1 260 1.2E-129 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 SUPERFAMILY SSF53223 4 102 2.24E-31 T 22-04-2016 YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 271 3.2E-96 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 PANTHER PTHR21089 3 273 4.0E-161 T 22-04-2016 YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 SUPERFAMILY SSF51735 103 269 6.27E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 PANTHER PTHR21089:SF2 3 273 4.0E-161 T 22-04-2016 YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 Gene3D G3DSA:3.40.192.10 3 108 5.3E-38 T 22-04-2016 YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 191 1.0E-10 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 270 33.12 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 Gene3D G3DSA:3.40.50.720 109 245 1.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0246 7379f7332f1a3cdbaf63dff970b8d0c3 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 2.8E-25 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2379 55f391cf91c1fec2f03a88caf6e7eb1d 365 PANTHER PTHR22893:SF14 1 365 1.3E-179 T 22-04-2016 YPO2379 55f391cf91c1fec2f03a88caf6e7eb1d 365 SUPERFAMILY SSF51395 1 365 4.45E-125 T 22-04-2016 YPO2379 55f391cf91c1fec2f03a88caf6e7eb1d 365 Gene3D G3DSA:3.20.20.70 4 364 7.9E-138 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2379 55f391cf91c1fec2f03a88caf6e7eb1d 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 1.8E-93 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YPO2379 55f391cf91c1fec2f03a88caf6e7eb1d 365 PANTHER PTHR22893 1 365 1.3E-179 T 22-04-2016 YPO3224 87764000f0484f305f802da25e3cbb9c 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 7.2E-225 T 22-04-2016 IPR010520 UPF0255 family YPO3224 87764000f0484f305f802da25e3cbb9c 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 66.431 T 22-04-2016 IPR010520 UPF0255 family YPO3224 87764000f0484f305f802da25e3cbb9c 415 PANTHER PTHR11614 117 302 1.0E-48 T 22-04-2016 YPO3224 87764000f0484f305f802da25e3cbb9c 415 PANTHER PTHR11614:SF87 117 302 1.0E-48 T 22-04-2016 YPO3224 87764000f0484f305f802da25e3cbb9c 415 Gene3D G3DSA:3.40.50.1820 347 411 1.7E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3224 87764000f0484f305f802da25e3cbb9c 415 Gene3D G3DSA:3.40.50.1820 156 302 1.7E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3224 87764000f0484f305f802da25e3cbb9c 415 SUPERFAMILY SSF53474 46 412 3.24E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1496 5e539c21d472f4b8178f69985538f972 436 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 328 418 1.9E-10 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain YPO1496 5e539c21d472f4b8178f69985538f972 436 PANTHER PTHR11228 45 428 3.8E-116 T 22-04-2016 YPO1496 5e539c21d472f4b8178f69985538f972 436 PANTHER PTHR11228:SF7 45 428 3.8E-116 T 22-04-2016 YPO1496 5e539c21d472f4b8178f69985538f972 436 Gene3D G3DSA:3.20.20.70 75 404 4.1E-37 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1496 5e539c21d472f4b8178f69985538f972 436 Pfam PF04055 Radical SAM superfamily 80 245 2.3E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO1496 5e539c21d472f4b8178f69985538f972 436 SUPERFAMILY SSF102114 74 400 9.29E-35 T 22-04-2016 YPO0186 56505fbcc0a0955e449418487e044485 326 Gene3D G3DSA:3.40.50.2000 169 323 1.8E-26 T 22-04-2016 YPO0186 56505fbcc0a0955e449418487e044485 326 Gene3D G3DSA:3.40.50.2000 2 103 2.2E-28 T 22-04-2016 YPO0186 56505fbcc0a0955e449418487e044485 326 SUPERFAMILY SSF53756 2 324 3.03E-56 T 22-04-2016 YPO0186 56505fbcc0a0955e449418487e044485 326 PANTHER PTHR30160:SF7 1 310 7.6E-57 T 22-04-2016 YPO0186 56505fbcc0a0955e449418487e044485 326 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 81 302 4.4E-13 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YPO0186 56505fbcc0a0955e449418487e044485 326 PANTHER PTHR30160 1 310 7.6E-57 T 22-04-2016 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 SUPERFAMILY SSF48600 4 88 4.4E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 PANTHER PTHR21363 88 371 4.3E-83 T 22-04-2016 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 Gene3D G3DSA:1.10.3660.10 248 372 2.4E-58 T 22-04-2016 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 Pfam PF01817 Chorismate mutase type II 9 86 3.0E-20 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 SMART SM00830 9 89 1.1E-29 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 Pfam PF02153 Prephenate dehydrogenase 138 344 3.2E-31 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 5.3E-44 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 SUPERFAMILY SSF48179 241 366 8.73E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 Gene3D G3DSA:3.40.50.720 84 247 2.0E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 SUPERFAMILY SSF51735 91 238 1.3E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 PANTHER PTHR21363:SF0 88 371 4.3E-83 T 22-04-2016 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 Gene3D G3DSA:1.20.59.10 3 83 2.7E-22 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YPO3285 b23b755abe3e064bdacd2ef2e0ec29ac 373 PIRSF PIRSF001499 1 373 6.4E-183 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 Pfam PF01743 Poly A polymerase head domain 85 219 1.2E-39 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 Gene3D G3DSA:3.30.460.10 67 218 3.2E-50 T 22-04-2016 YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 Gene3D G3DSA:1.10.3090.10 219 456 3.7E-50 T 22-04-2016 YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 54 483 1.7E-160 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 29 482 38.635 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 246 306 5.7E-20 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 PANTHER PTHR13734 5 356 9.6E-140 T 22-04-2016 YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 SUPERFAMILY SSF81891 217 455 1.96E-50 T 22-04-2016 YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 Pfam PF12626 Polymerase A arginine-rich C-terminus 364 483 4.8E-44 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 SUPERFAMILY SSF81301 56 215 1.06E-40 T 22-04-2016 YPO3399 5077097bb80b8a90c65c1f8c12a61295 491 PANTHER PTHR13734:SF47 5 356 9.6E-140 T 22-04-2016 YPO2685 19481fde488d3382a6ab11a938f5d172 175 Gene3D G3DSA:1.20.1380.10 62 175 3.9E-53 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YPO2685 19481fde488d3382a6ab11a938f5d172 175 SUPERFAMILY SSF82808 60 175 2.88E-48 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YPO2685 19481fde488d3382a6ab11a938f5d172 175 Pfam PF03925 SeqA protein C-terminal domain 65 173 4.2E-48 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YPO2685 19481fde488d3382a6ab11a938f5d172 175 SUPERFAMILY SSF47598 1 35 7.45E-14 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YPO2685 19481fde488d3382a6ab11a938f5d172 175 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 175 41.949 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 YPO2685 19481fde488d3382a6ab11a938f5d172 175 Gene3D G3DSA:1.10.1220.10 1 40 6.6E-27 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YPO4116 ea266c30b483ab34acdc2a61cf8d159b 323 SUPERFAMILY SSF161098 33 309 4.91E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4116 ea266c30b483ab34acdc2a61cf8d159b 323 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 316 2.1E-94 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 YPO4116 ea266c30b483ab34acdc2a61cf8d159b 323 PANTHER PTHR30425 1 323 6.6E-158 T 22-04-2016 YPO4116 ea266c30b483ab34acdc2a61cf8d159b 323 PANTHER PTHR30425:SF1 1 323 6.6E-158 T 22-04-2016 YPO4116 ea266c30b483ab34acdc2a61cf8d159b 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 313 4.6E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4116 ea266c30b483ab34acdc2a61cf8d159b 323 Gene3D G3DSA:1.10.3720.10 30 320 1.2E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 Gene3D G3DSA:2.40.128.130 452 759 1.5E-78 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 Pfam PF03797 Autotransporter beta-domain 495 742 3.2E-48 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 PRINTS PR01484 Pertactin virulence factor family signature 714 739 2.7E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 PRINTS PR01484 Pertactin virulence factor family signature 627 644 2.7E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 PRINTS PR01484 Pertactin virulence factor family signature 646 669 2.7E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 PRINTS PR01484 Pertactin virulence factor family signature 675 696 2.7E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 PRINTS PR01484 Pertactin virulence factor family signature 535 559 2.7E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 PRINTS PR01484 Pertactin virulence factor family signature 739 759 2.7E-12 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 SUPERFAMILY SSF51126 56 445 6.59E-22 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 SMART SM00869 494 748 1.3E-44 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 Pfam PF03212 Pertactin 311 424 3.2E-21 T 22-04-2016 IPR004899 Pertactin, central region YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 SUPERFAMILY SSF103515 463 759 3.92E-50 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 Gene3D G3DSA:2.160.20.20 202 451 1.0E-47 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 Gene3D G3DSA:2.160.20.20 49 169 1.0E-47 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 PANTHER PTHR35037 1 759 9.2E-155 T 22-04-2016 YPO3028 c1b9503dca60b1c0c3e0bb6cf05c4417 759 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 327 759 1.6E-96 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO3126 d98aa73562578ec7a12e59647a876244 89 PIRSF PIRSF016789 2 89 2.1E-41 T 22-04-2016 IPR007401 Protein of unknown function DUF454 YPO3126 d98aa73562578ec7a12e59647a876244 89 PANTHER PTHR35813 1 89 8.3E-35 T 22-04-2016 YPO3126 d98aa73562578ec7a12e59647a876244 89 Pfam PF04304 Protein of unknown function (DUF454) 3 88 2.9E-36 T 22-04-2016 IPR007401 Protein of unknown function DUF454 YPO3126 d98aa73562578ec7a12e59647a876244 89 PANTHER PTHR35813:SF1 1 89 8.3E-35 T 22-04-2016 YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 SUPERFAMILY SSF54106 420 466 1.15E-9 T 22-04-2016 IPR018392 LysM domain YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 SUPERFAMILY SSF54106 368 411 3.92E-10 T 22-04-2016 IPR018392 LysM domain YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 SUPERFAMILY SSF53955 121 272 7.74E-42 T 22-04-2016 IPR023346 Lysozyme-like domain YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 SMART SM00257 421 466 3.3E-9 T 22-04-2016 IPR018392 LysM domain YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 SMART SM00257 368 412 1.7E-12 T 22-04-2016 IPR018392 LysM domain YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 Gene3D G3DSA:3.10.350.10 367 411 1.3E-16 T 22-04-2016 IPR018392 LysM domain YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 Gene3D G3DSA:3.10.350.10 419 466 1.9E-15 T 22-04-2016 IPR018392 LysM domain YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 Pfam PF01464 Transglycosylase SLT domain 129 236 1.1E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 Pfam PF01476 LysM domain 369 410 2.9E-11 T 22-04-2016 IPR018392 LysM domain YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 Pfam PF01476 LysM domain 422 464 1.1E-7 T 22-04-2016 IPR018392 LysM domain YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 143 171 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 PANTHER PTHR21666:SF206 40 466 6.5E-189 T 22-04-2016 YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 PANTHER PTHR21666 40 466 6.5E-189 T 22-04-2016 YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 Gene3D G3DSA:1.10.530.10 119 277 1.9E-47 T 22-04-2016 YPO1078 7dbfcf5aa0ac9e62bafa2248bd83031c 475 Gene3D G3DSA:1.10.1220.10 278 304 3.4E-4 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YPO2673 3d444918ed0399c1741fdade644bb669 352 Pfam PF03824 High-affinity nickel-transport protein 48 337 8.5E-91 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 YPO2673 3d444918ed0399c1741fdade644bb669 352 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 52 333 3.8E-126 T 22-04-2016 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 YPO2673 3d444918ed0399c1741fdade644bb669 352 PANTHER PTHR31611 18 350 9.1E-120 T 22-04-2016 YPO1304 75b2f67f489a700656698a647969b436 273 PANTHER PTHR30251:SF9 15 273 2.5E-132 T 22-04-2016 YPO1304 75b2f67f489a700656698a647969b436 273 Gene3D G3DSA:2.60.40.1070 175 269 4.1E-26 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1304 75b2f67f489a700656698a647969b436 273 PANTHER PTHR30251 15 273 2.5E-132 T 22-04-2016 YPO1304 75b2f67f489a700656698a647969b436 273 SUPERFAMILY SSF49584 167 269 2.35E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1304 75b2f67f489a700656698a647969b436 273 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 195 265 3.9E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1304 75b2f67f489a700656698a647969b436 273 Gene3D G3DSA:2.60.40.360 45 171 1.9E-36 T 22-04-2016 IPR008962 PapD-like YPO1304 75b2f67f489a700656698a647969b436 273 SUPERFAMILY SSF49354 41 172 5.79E-36 T 22-04-2016 IPR008962 PapD-like YPO1304 75b2f67f489a700656698a647969b436 273 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 117 134 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPO1304 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 90 111 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1304 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 45 54 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1304 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 155 170 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1304 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 190 205 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1304 75b2f67f489a700656698a647969b436 273 PRINTS PR00969 Pili chaperone signature 118 135 1.3E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1304 75b2f67f489a700656698a647969b436 273 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 45 173 8.8E-37 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO2521 42f2c3f0345699187100f46055d36477 86 Gene3D G3DSA:3.30.1660.10 18 86 3.6E-27 T 22-04-2016 IPR025543 Dodecin-like YPO2521 42f2c3f0345699187100f46055d36477 86 PANTHER PTHR34156:SF1 2 86 1.4E-54 T 22-04-2016 YPO2521 42f2c3f0345699187100f46055d36477 86 SUPERFAMILY SSF159871 3 86 3.4E-26 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO2521 42f2c3f0345699187100f46055d36477 86 PANTHER PTHR34156 2 86 1.4E-54 T 22-04-2016 YPO2521 42f2c3f0345699187100f46055d36477 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 1.1E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO3908 20f71592d740fcfec8aa1e57053d6745 318 PANTHER PTHR32196 1 282 6.7E-169 T 22-04-2016 YPO3908 20f71592d740fcfec8aa1e57053d6745 318 Pfam PF13407 Periplasmic binding protein domain 28 275 3.3E-45 T 22-04-2016 IPR025997 Periplasmic binding protein YPO3908 20f71592d740fcfec8aa1e57053d6745 318 SUPERFAMILY SSF53822 23 309 1.85E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO3908 20f71592d740fcfec8aa1e57053d6745 318 Gene3D G3DSA:3.40.50.2300 26 139 2.0E-27 T 22-04-2016 YPO3908 20f71592d740fcfec8aa1e57053d6745 318 Gene3D G3DSA:3.40.50.2300 140 309 2.7E-46 T 22-04-2016 YPO3908 20f71592d740fcfec8aa1e57053d6745 318 PANTHER PTHR32196:SF20 1 282 6.7E-169 T 22-04-2016 YPO2944 b3149ccf4c081df629fb023cd618459b 259 PANTHER PTHR30251 2 250 1.5E-76 T 22-04-2016 YPO2944 b3149ccf4c081df629fb023cd618459b 259 SUPERFAMILY SSF49584 158 249 5.23E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO2944 b3149ccf4c081df629fb023cd618459b 259 Gene3D G3DSA:2.60.40.360 29 150 8.2E-45 T 22-04-2016 IPR008962 PapD-like YPO2944 b3149ccf4c081df629fb023cd618459b 259 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 105 122 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPO2944 b3149ccf4c081df629fb023cd618459b 259 PANTHER PTHR30251:SF2 2 250 1.5E-76 T 22-04-2016 YPO2944 b3149ccf4c081df629fb023cd618459b 259 SUPERFAMILY SSF49354 24 150 8.29E-42 T 22-04-2016 IPR008962 PapD-like YPO2944 b3149ccf4c081df629fb023cd618459b 259 PRINTS PR00969 Pili chaperone signature 78 99 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO2944 b3149ccf4c081df629fb023cd618459b 259 PRINTS PR00969 Pili chaperone signature 29 38 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO2944 b3149ccf4c081df629fb023cd618459b 259 PRINTS PR00969 Pili chaperone signature 106 123 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO2944 b3149ccf4c081df629fb023cd618459b 259 PRINTS PR00969 Pili chaperone signature 132 147 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO2944 b3149ccf4c081df629fb023cd618459b 259 PRINTS PR00969 Pili chaperone signature 172 187 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO2944 b3149ccf4c081df629fb023cd618459b 259 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 150 4.9E-43 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO2944 b3149ccf4c081df629fb023cd618459b 259 Gene3D G3DSA:2.60.40.1070 155 242 7.5E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO2944 b3149ccf4c081df629fb023cd618459b 259 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 177 240 6.0E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 SUPERFAMILY SSF53383 2 425 1.73E-137 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 Gene3D G3DSA:3.90.1150.10 2 69 6.7E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 Gene3D G3DSA:3.90.1150.10 319 425 6.7E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 PANTHER PTHR11986:SF5 1 426 3.5E-241 T 22-04-2016 YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 Pfam PF00202 Aminotransferase class-III 32 398 4.2E-78 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 PANTHER PTHR11986 1 426 3.5E-241 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 Gene3D G3DSA:3.40.640.10 70 315 3.1E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 106.727 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO3389 f4eb650a6fe08a0672e7e2de54682b20 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.7E-203 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 PANTHER PTHR33209 1 612 3.8E-247 T 22-04-2016 YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 PANTHER PTHR33209:SF1 1 612 3.8E-247 T 22-04-2016 YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 SUPERFAMILY SSF52096 34 179 1.03E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 SUPERFAMILY SSF52096 210 284 1.03E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 Pfam PF01343 Peptidase family S49 139 287 3.6E-35 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 Pfam PF01343 Peptidase family S49 390 541 1.5E-47 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 SUPERFAMILY SSF52096 466 528 1.3E-40 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 SUPERFAMILY SSF52096 316 438 1.3E-40 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 PIRSF PIRSF001217 8 616 6.1E-214 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 9.6E-51 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 2.9E-221 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 Gene3D G3DSA:3.90.226.10 218 314 1.9E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 Gene3D G3DSA:3.90.226.10 31 175 1.9E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 Gene3D G3DSA:3.90.226.10 321 430 1.8E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2162 23f46d259991eb1edd4aa65e6c5ee5cb 616 Gene3D G3DSA:3.90.226.10 467 550 1.8E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1997 2ff6a33547cf062e9a94c35514db71f4 357 Pfam PF12697 Alpha/beta hydrolase family 84 308 1.4E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO1997 2ff6a33547cf062e9a94c35514db71f4 357 PANTHER PTHR11177 104 345 3.7E-74 T 22-04-2016 YPO1997 2ff6a33547cf062e9a94c35514db71f4 357 PANTHER PTHR11177:SF162 104 345 3.7E-74 T 22-04-2016 YPO1997 2ff6a33547cf062e9a94c35514db71f4 357 SUPERFAMILY SSF53474 56 153 8.7E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1997 2ff6a33547cf062e9a94c35514db71f4 357 SUPERFAMILY SSF53474 186 353 8.7E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1997 2ff6a33547cf062e9a94c35514db71f4 357 Gene3D G3DSA:3.40.50.1820 27 356 1.4E-110 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3310 a8916df1f6d8b6172c6ef7aee76ebb8e 314 SUPERFAMILY SSF46785 13 55 8.71E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3310 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Pfam PF04198 Putative sugar-binding domain 64 314 5.2E-62 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YPO3310 a8916df1f6d8b6172c6ef7aee76ebb8e 314 SUPERFAMILY SSF100950 64 314 1.17E-65 T 22-04-2016 YPO3310 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Gene3D G3DSA:3.40.50.1360 57 314 2.0E-74 T 22-04-2016 YPO3310 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Gene3D G3DSA:1.10.10.10 14 52 4.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3310 a8916df1f6d8b6172c6ef7aee76ebb8e 314 PANTHER PTHR34294 6 314 1.8E-74 T 22-04-2016 YPO3310 a8916df1f6d8b6172c6ef7aee76ebb8e 314 Pfam PF01047 MarR family 14 51 9.5E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO1504 873d416aad289cfbd167c68fca48d092 383 PANTHER PTHR23537:SF1 3 382 5.3E-53 T 22-04-2016 YPO1504 873d416aad289cfbd167c68fca48d092 383 PANTHER PTHR23537 3 382 5.3E-53 T 22-04-2016 YPO1504 873d416aad289cfbd167c68fca48d092 383 Gene3D G3DSA:1.20.1250.20 9 181 4.1E-12 T 22-04-2016 YPO1504 873d416aad289cfbd167c68fca48d092 383 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 3.9E-88 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB YPO1504 873d416aad289cfbd167c68fca48d092 383 SUPERFAMILY SSF103473 6 377 1.96E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 2.8E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 SUPERFAMILY SSF81442 43 560 3.14E-179 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 3.3E-135 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 Gene3D G3DSA:1.20.210.10 40 589 2.8E-187 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PANTHER PTHR10422:SF26 33 614 0.0 T 22-04-2016 YPO3165 c7740246da51ef6159bc73f5a49cbcd2 663 PANTHER PTHR10422 33 614 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 SUPERFAMILY SSF47413 1 59 2.32E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 PANTHER PTHR30146:SF46 1 325 1.8E-248 T 22-04-2016 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 Gene3D G3DSA:3.40.50.2300 167 322 1.1E-47 T 22-04-2016 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 Pfam PF13377 Periplasmic binding protein-like domain 169 321 2.1E-31 T 22-04-2016 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 5.9E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 SMART SM00354 1 71 2.2E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 SUPERFAMILY SSF53822 61 324 2.14E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 PANTHER PTHR30146 1 325 1.8E-248 T 22-04-2016 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 Gene3D G3DSA:1.10.260.40 2 57 1.0E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0165 d64d2ccf6c585bf222f7ad716b380496 328 Gene3D G3DSA:3.40.50.2300 58 166 6.8E-41 T 22-04-2016 YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 PANTHER PTHR30531 1 355 5.6E-274 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 340 5.1E-104 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 2.9E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 2.9E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 2.9E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 2.9E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.9E-39 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 Gene3D G3DSA:3.40.1690.10 211 346 2.5E-50 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 SUPERFAMILY SSF160544 238 344 1.06E-31 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 4 342 1.4E-117 T 22-04-2016 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 YPO0273 b1deadf2b03cef6d50d814876c2a000b 355 PANTHER PTHR30531:SF6 1 355 5.6E-274 T 22-04-2016 YPO1028 ad9367aa7c96641ac2e888b7e4fdf69d 439 Gene3D G3DSA:3.40.640.10 70 317 9.2E-75 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1028 ad9367aa7c96641ac2e888b7e4fdf69d 439 Pfam PF00266 Aminotransferase class-V 60 426 7.6E-137 T 22-04-2016 IPR000192 Aminotransferase class V domain YPO1028 ad9367aa7c96641ac2e888b7e4fdf69d 439 PANTHER PTHR11601:SF44 39 439 0.0 T 22-04-2016 YPO1028 ad9367aa7c96641ac2e888b7e4fdf69d 439 PANTHER PTHR11601 39 439 0.0 T 22-04-2016 YPO1028 ad9367aa7c96641ac2e888b7e4fdf69d 439 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 251 270 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPO1028 ad9367aa7c96641ac2e888b7e4fdf69d 439 Gene3D G3DSA:3.90.1150.10 318 432 2.9E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1028 ad9367aa7c96641ac2e888b7e4fdf69d 439 SUPERFAMILY SSF53383 46 435 1.06E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1028 ad9367aa7c96641ac2e888b7e4fdf69d 439 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 42 439 6.8E-237 T 22-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPO3666 98824e785c47f5a7d2c241aae8d17aaf 331 PIRSF PIRSF038471 2 284 2.4E-74 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 YPO3666 98824e785c47f5a7d2c241aae8d17aaf 331 PANTHER PTHR34138 1 331 1.3E-103 T 22-04-2016 YPO3666 98824e785c47f5a7d2c241aae8d17aaf 331 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 1.2E-113 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 YPO3666 98824e785c47f5a7d2c241aae8d17aaf 331 Pfam PF04085 rod shape-determining protein MreC 123 269 1.2E-37 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 YPO3666 98824e785c47f5a7d2c241aae8d17aaf 331 PANTHER PTHR34138:SF1 1 331 1.3E-103 T 22-04-2016 YPO1883 2ea8dc2008e299dc39fcc33b08028a7d 358 Gene3D G3DSA:3.40.50.10140 139 231 4.1E-9 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 YPO1883 2ea8dc2008e299dc39fcc33b08028a7d 358 SUPERFAMILY SSF52200 136 238 6.41E-15 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 YPO1883 2ea8dc2008e299dc39fcc33b08028a7d 358 Pfam PF13676 TIR domain 139 240 2.1E-19 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 YPO3618 fb5ca35d188df8a9d417bf49c4902e14 376 PANTHER PTHR22604 17 376 8.6E-212 T 22-04-2016 YPO3618 fb5ca35d188df8a9d417bf49c4902e14 376 SUPERFAMILY SSF55347 152 312 5.01E-16 T 22-04-2016 YPO3618 fb5ca35d188df8a9d417bf49c4902e14 376 PANTHER PTHR22604:SF119 17 376 8.6E-212 T 22-04-2016 YPO3618 fb5ca35d188df8a9d417bf49c4902e14 376 Gene3D G3DSA:3.40.50.720 18 163 7.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3618 fb5ca35d188df8a9d417bf49c4902e14 376 Gene3D G3DSA:3.30.360.10 164 282 7.8E-23 T 22-04-2016 YPO3618 fb5ca35d188df8a9d417bf49c4902e14 376 Gene3D G3DSA:3.30.360.10 314 368 7.8E-23 T 22-04-2016 YPO3618 fb5ca35d188df8a9d417bf49c4902e14 376 SUPERFAMILY SSF51735 17 176 3.94E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3618 fb5ca35d188df8a9d417bf49c4902e14 376 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 23 145 7.6E-14 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPO1394 14144726243f24902a7f874a275ea347 763 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 72 727 2.0E-182 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 YPO1394 14144726243f24902a7f874a275ea347 763 SUPERFAMILY SSF56281 505 751 1.57E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1394 14144726243f24902a7f874a275ea347 763 Pfam PF00753 Metallo-beta-lactamase superfamily 514 690 1.5E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1394 14144726243f24902a7f874a275ea347 763 Pfam PF13567 Domain of unknown function (DUF4131) 16 162 1.2E-11 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 YPO1394 14144726243f24902a7f874a275ea347 763 PANTHER PTHR30619 8 758 2.0E-266 T 22-04-2016 YPO1394 14144726243f24902a7f874a275ea347 763 Gene3D G3DSA:3.60.15.10 497 718 1.8E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1394 14144726243f24902a7f874a275ea347 763 SMART SM00849 514 698 4.9E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1394 14144726243f24902a7f874a275ea347 763 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 413 8.1E-38 T 22-04-2016 IPR004477 ComEC/Rec2-related protein YPO1394 14144726243f24902a7f874a275ea347 763 Pfam PF03772 Competence protein 209 477 4.7E-52 T 22-04-2016 IPR004477 ComEC/Rec2-related protein YPO1394 14144726243f24902a7f874a275ea347 763 PANTHER PTHR30619:SF2 8 758 2.0E-266 T 22-04-2016 YPO3975 1bb96afedb0c95d7319c71bc29539d8c 680 PANTHER PTHR11804:SF8 3 678 0.0 T 22-04-2016 YPO3975 1bb96afedb0c95d7319c71bc29539d8c 680 PANTHER PTHR11804 3 678 0.0 T 22-04-2016 YPO3975 1bb96afedb0c95d7319c71bc29539d8c 680 Gene3D G3DSA:1.20.1050.40 7 138 1.4E-26 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal YPO3975 1bb96afedb0c95d7319c71bc29539d8c 680 Pfam PF01432 Peptidase family M3 222 677 8.1E-168 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 YPO3975 1bb96afedb0c95d7319c71bc29539d8c 680 SUPERFAMILY SSF55486 1 677 1.36E-214 T 22-04-2016 YPO3975 1bb96afedb0c95d7319c71bc29539d8c 680 Gene3D G3DSA:3.40.390.10 360 504 1.1E-61 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YPO3975 1bb96afedb0c95d7319c71bc29539d8c 680 Gene3D G3DSA:1.10.1370.10 140 349 6.9E-143 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPO3975 1bb96afedb0c95d7319c71bc29539d8c 680 Gene3D G3DSA:1.10.1370.10 505 678 6.9E-143 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPO2971 118bc86eb0a072ef86eb81fbb6b04555 118 Pfam PF16068 Domain of unknown function (DUF4810) 26 109 2.0E-34 T 22-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats YPO2971 118bc86eb0a072ef86eb81fbb6b04555 118 PIRSF PIRSF020555 1 118 2.1E-57 T 22-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats YPO1357 c783ed41715ac5af483d832c92442a3f 339 SUPERFAMILY SSF53383 3 335 7.26E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1357 c783ed41715ac5af483d832c92442a3f 339 PANTHER PTHR10289 3 336 9.6E-160 T 22-04-2016 YPO1357 c783ed41715ac5af483d832c92442a3f 339 Pfam PF01212 Beta-eliminating lyase 4 284 1.9E-95 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 YPO1357 c783ed41715ac5af483d832c92442a3f 339 PIRSF PIRSF017617 1 339 2.9E-130 T 22-04-2016 IPR023603 Threonine aldolase YPO1357 c783ed41715ac5af483d832c92442a3f 339 Gene3D G3DSA:3.90.1150.10 247 336 2.9E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1357 c783ed41715ac5af483d832c92442a3f 339 PANTHER PTHR10289:SF5 3 336 9.6E-160 T 22-04-2016 YPO1357 c783ed41715ac5af483d832c92442a3f 339 Gene3D G3DSA:3.40.640.10 2 246 6.4E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0610 fafc531d0987bb80f9130703a1dfe61b 1117 PANTHER PTHR37469 568 1110 1.9E-65 T 22-04-2016 YPO0610 fafc531d0987bb80f9130703a1dfe61b 1117 SUPERFAMILY SSF48208 978 1091 1.11E-36 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 YPO0610 fafc531d0987bb80f9130703a1dfe61b 1117 SUPERFAMILY SSF48208 567 951 1.11E-36 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 YPO2938 1bebe059c5fc59a23d59b04e6584b110 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 494 8.5E-191 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO2938 1bebe059c5fc59a23d59b04e6584b110 500 PANTHER PTHR35565 1 499 0.0 T 22-04-2016 YPO2938 1bebe059c5fc59a23d59b04e6584b110 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 494 9.3E-218 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO2938 1bebe059c5fc59a23d59b04e6584b110 500 PANTHER PTHR35565:SF3 1 499 0.0 T 22-04-2016 YPO3407 c2ca37e909d37c20e37d939803c82435 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO3407 c2ca37e909d37c20e37d939803c82435 220 PANTHER PTHR11002 1 207 1.0E-137 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO3407 c2ca37e909d37c20e37d939803c82435 220 SMART SM00947 30 192 4.1E-65 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO3407 c2ca37e909d37c20e37d939803c82435 220 Gene3D G3DSA:3.40.1050.10 1 216 1.6E-75 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO3407 c2ca37e909d37c20e37d939803c82435 220 Pfam PF00484 Carbonic anhydrase 38 187 1.6E-49 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO3407 c2ca37e909d37c20e37d939803c82435 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO3407 c2ca37e909d37c20e37d939803c82435 220 SUPERFAMILY SSF53056 1 212 8.24E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO3407 c2ca37e909d37c20e37d939803c82435 220 PANTHER PTHR11002:SF11 1 207 1.0E-137 T 22-04-2016 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF54980 302 387 1.58E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO0026 bcbaa36752e151277c84ace93c0113ce 607 PANTHER PTHR23115:SF14 3 593 1.1E-303 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:2.40.50.250 483 577 1.7E-39 T 22-04-2016 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YPO0026 bcbaa36752e151277c84ace93c0113ce 607 Pfam PF00679 Elongation factor G C-terminus 397 476 3.6E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPO0026 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 7.5E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF52540 3 219 2.43E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0026 bcbaa36752e151277c84ace93c0113ce 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 2.4E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF50447 151 299 1.04E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO0026 bcbaa36752e151277c84ace93c0113ce 607 SUPERFAMILY SSF54980 398 512 3.26E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO0026 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:2.40.30.10 206 303 1.1E-26 T 22-04-2016 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:3.30.70.870 304 399 5.2E-35 T 22-04-2016 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 1.2E-57 T 22-04-2016 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:3.40.50.300 3 205 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0026 bcbaa36752e151277c84ace93c0113ce 607 PANTHER PTHR23115 3 593 1.1E-303 T 22-04-2016 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 6.2E-289 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 YPO0026 bcbaa36752e151277c84ace93c0113ce 607 Gene3D G3DSA:3.30.70.240 400 477 4.6E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 SMART SM00354 7 78 7.1E-8 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 PANTHER PTHR30146:SF3 210 346 2.1E-195 T 22-04-2016 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 PANTHER PTHR30146:SF3 6 193 2.1E-195 T 22-04-2016 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 SUPERFAMILY SSF53822 67 327 4.71E-41 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Gene3D G3DSA:3.40.50.2300 179 327 4.4E-33 T 22-04-2016 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 52 5.8E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 PANTHER PTHR30146 210 346 2.1E-195 T 22-04-2016 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 PANTHER PTHR30146 6 193 2.1E-195 T 22-04-2016 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 SUPERFAMILY SSF47413 6 58 1.03E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Pfam PF13377 Periplasmic binding protein-like domain 175 328 1.4E-21 T 22-04-2016 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Gene3D G3DSA:3.40.50.2300 65 178 2.8E-20 T 22-04-2016 YPO2478 9c3b30dad388d79d1b45b0dad1a8fe3e 346 Gene3D G3DSA:1.10.260.40 6 64 1.7E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF55021 665 741 1.49E-13 T 22-04-2016 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:3.10.20.30 405 466 5.2E-26 T 22-04-2016 IPR012675 Beta-grasp domain YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 PANTHER PTHR21262:SF5 55 743 0.0 T 22-04-2016 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF13291 ACT domain 664 740 1.5E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.6E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 SMART SM00954 251 361 3.5E-66 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:3.30.460.10 193 341 3.1E-51 T 22-04-2016 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF02824 TGS domain 405 464 1.2E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF109604 25 207 7.22E-46 T 22-04-2016 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 PANTHER PTHR21262 55 743 0.0 T 22-04-2016 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 Gene3D G3DSA:3.30.70.260 664 739 1.0E-26 T 22-04-2016 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF81301 196 409 2.62E-64 T 22-04-2016 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 Pfam PF13328 HD domain 46 191 2.5E-41 T 22-04-2016 IPR003607 HD/PDEase domain YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 SUPERFAMILY SSF81271 398 464 2.62E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YPO3380 937f9571f7b751e668add8b6ea7f9dab 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 2.5E-187 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 PANTHER PTHR11124:SF14 15 38 1.9E-58 T 22-04-2016 YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 Gene3D G3DSA:3.60.21.10 17 173 6.6E-35 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 19 169 9.6E-15 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 PANTHER PTHR11124 59 183 1.9E-58 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 128 152 - T 22-04-2016 IPR020935 Phosphodiesterase YfcE, conserved site KEGG: 00564+3.1.4.-|KEGG: 00565+3.1.4.- YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 18 175 4.2E-28 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 SUPERFAMILY SSF56300 17 43 3.8E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 SUPERFAMILY SSF56300 73 182 3.8E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 PANTHER PTHR11124:SF14 59 183 1.9E-58 T 22-04-2016 YPO2780 f5032bdcd09611b87b029ebfd1c15b55 191 PANTHER PTHR11124 15 38 1.9E-58 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 YPO3384 211f4af551afff9e97b201733c282113 233 Pfam PF01048 Phosphorylase superfamily 2 226 2.3E-46 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO3384 211f4af551afff9e97b201733c282113 233 Gene3D G3DSA:3.40.50.1580 1 230 1.7E-76 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO3384 211f4af551afff9e97b201733c282113 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 226 4.7E-113 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 YPO3384 211f4af551afff9e97b201733c282113 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.826 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 YPO3384 211f4af551afff9e97b201733c282113 233 PANTHER PTHR21234:SF16 1 226 5.1E-62 T 22-04-2016 YPO3384 211f4af551afff9e97b201733c282113 233 SUPERFAMILY SSF53167 1 229 1.06E-73 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO3384 211f4af551afff9e97b201733c282113 233 PANTHER PTHR21234 1 226 5.1E-62 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPO2451 8f59455028857041b2f900a023a85c2c 355 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 38.612 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 YPO2451 8f59455028857041b2f900a023a85c2c 355 Pfam PF00581 Rhodanese-like domain 138 233 2.9E-15 T 22-04-2016 IPR001763 Rhodanese-like domain YPO2451 8f59455028857041b2f900a023a85c2c 355 SMART SM00450 136 237 9.3E-27 T 22-04-2016 IPR001763 Rhodanese-like domain YPO2451 8f59455028857041b2f900a023a85c2c 355 Pfam PF12368 Rhodanase C-terminal 246 308 5.2E-19 T 22-04-2016 IPR022111 Rhodanase, C-terminal YPO2451 8f59455028857041b2f900a023a85c2c 355 Gene3D G3DSA:3.40.250.10 117 242 7.1E-37 T 22-04-2016 IPR001763 Rhodanese-like domain YPO2451 8f59455028857041b2f900a023a85c2c 355 PANTHER PTHR22778 1 322 1.6E-119 T 22-04-2016 YPO2451 8f59455028857041b2f900a023a85c2c 355 SUPERFAMILY SSF52821 128 268 6.96E-31 T 22-04-2016 IPR001763 Rhodanese-like domain YPO2451 8f59455028857041b2f900a023a85c2c 355 PANTHER PTHR22778:SF21 1 322 1.6E-119 T 22-04-2016 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 SUPERFAMILY SSF56801 7 565 1.31E-84 T 22-04-2016 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 832 848 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 927 1035 4.0E-31 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1012 f63a514460e3de43c0828810ac64fec1 1137 PANTHER PTHR11712:SF285 214 1092 1.1E-126 T 22-04-2016 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Gene3D G3DSA:1.10.1200.10 600 669 3.1E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Pfam PF00501 AMP-binding enzyme 16 462 1.5E-58 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 SUPERFAMILY SSF47336 595 696 1.57E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1012 f63a514460e3de43c0828810ac64fec1 1137 PANTHER PTHR11712 214 1092 1.1E-126 T 22-04-2016 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Gene3D G3DSA:3.40.47.10 933 1089 3.1E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 SMART SM00825 Beta-ketoacyl synthase 684 1090 2.7E-110 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Gene3D G3DSA:2.30.38.10 372 452 7.8E-17 T 22-04-2016 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 SMART SM00823 Phosphopantetheine attachment site 598 667 0.0019 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 SUPERFAMILY SSF53901 678 788 1.72E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 SUPERFAMILY SSF53901 815 1035 1.72E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Pfam PF00550 Phosphopantetheine attachment site 603 660 1.3E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Gene3D G3DSA:3.40.50.980 13 179 1.5E-15 T 22-04-2016 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Gene3D G3DSA:3.30.300.30 454 556 1.4E-10 T 22-04-2016 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 682 919 1.6E-58 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Gene3D G3DSA:3.40.47.10 680 932 5.3E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1012 f63a514460e3de43c0828810ac64fec1 1137 Gene3D G3DSA:3.40.50.980 180 345 3.7E-26 T 22-04-2016 YPO3861 be13e550281057eebb281cb1ac8ed073 293 Pfam PF00483 Nucleotidyl transferase 2 238 7.5E-71 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPO3861 be13e550281057eebb281cb1ac8ed073 293 PANTHER PTHR22572 2 268 1.3E-169 T 22-04-2016 YPO3861 be13e550281057eebb281cb1ac8ed073 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.1E-159 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YPO3861 be13e550281057eebb281cb1ac8ed073 293 SUPERFAMILY SSF53448 1 286 2.93E-92 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3861 be13e550281057eebb281cb1ac8ed073 293 Gene3D G3DSA:3.90.550.10 1 263 2.1E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3861 be13e550281057eebb281cb1ac8ed073 293 PANTHER PTHR22572:SF105 2 268 1.3E-169 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YPO0775 2d3df5e69d16891325c0760216d3205d 358 SUPERFAMILY SSF51735 4 137 2.36E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0775 2d3df5e69d16891325c0760216d3205d 358 Gene3D G3DSA:3.40.50.720 5 152 1.9E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0775 2d3df5e69d16891325c0760216d3205d 358 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 80 2.8E-8 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO2663 ed8cf35b822f79f4696178affd4da200 268 PANTHER PTHR24220 12 260 1.1E-172 T 22-04-2016 YPO2663 ed8cf35b822f79f4696178affd4da200 268 SMART SM00382 35 223 4.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2663 ed8cf35b822f79f4696178affd4da200 268 SUPERFAMILY SSF52540 23 236 5.02E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2663 ed8cf35b822f79f4696178affd4da200 268 Pfam PF00005 ABC transporter 26 175 1.8E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2663 ed8cf35b822f79f4696178affd4da200 268 Gene3D G3DSA:3.40.50.300 20 243 2.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2663 ed8cf35b822f79f4696178affd4da200 268 PANTHER PTHR24220:SF505 12 260 1.1E-172 T 22-04-2016 YPO3308 f1386bea64e120ec4620cc059f50b9bc 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 157 1.5E-57 T 22-04-2016 IPR008136 CinA, C-terminal YPO3308 f1386bea64e120ec4620cc059f50b9bc 162 Pfam PF02464 Competence-damaged protein 8 158 1.4E-58 T 22-04-2016 IPR008136 CinA, C-terminal YPO3308 f1386bea64e120ec4620cc059f50b9bc 162 SUPERFAMILY SSF142433 6 159 2.09E-57 T 22-04-2016 IPR008136 CinA, C-terminal YPO3308 f1386bea64e120ec4620cc059f50b9bc 162 Gene3D G3DSA:3.90.950.20 5 159 3.4E-60 T 22-04-2016 IPR008136 CinA, C-terminal YPO3308 f1386bea64e120ec4620cc059f50b9bc 162 PANTHER PTHR13939 5 161 3.5E-78 T 22-04-2016 YPO1920 cc5e869bc9991fbbe4a22bbbcaaa4411 863 Pfam PF00577 Outer membrane usher protein 192 762 7.8E-142 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1920 cc5e869bc9991fbbe4a22bbbcaaa4411 863 PANTHER PTHR30451:SF7 1 549 0.0 T 22-04-2016 YPO1920 cc5e869bc9991fbbe4a22bbbcaaa4411 863 Pfam PF13954 PapC N-terminal domain 34 173 2.4E-34 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPO1920 cc5e869bc9991fbbe4a22bbbcaaa4411 863 PANTHER PTHR30451 570 862 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1920 cc5e869bc9991fbbe4a22bbbcaaa4411 863 SUPERFAMILY SSF141729 31 151 1.31E-26 T 22-04-2016 YPO1920 cc5e869bc9991fbbe4a22bbbcaaa4411 863 PANTHER PTHR30451 1 549 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1920 cc5e869bc9991fbbe4a22bbbcaaa4411 863 Pfam PF13953 PapC C-terminal domain 771 842 2.1E-20 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPO1920 cc5e869bc9991fbbe4a22bbbcaaa4411 863 PANTHER PTHR30451:SF7 570 862 0.0 T 22-04-2016 YPO3220 f5df99447dd6ee3308344118b7a1df48 252 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 7 245 29.808 T 22-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 YPO3220 f5df99447dd6ee3308344118b7a1df48 252 Pfam PF07238 PilZ domain 118 236 7.3E-11 T 22-04-2016 IPR009875 PilZ domain GO:0035438 YPO3220 f5df99447dd6ee3308344118b7a1df48 252 Pfam PF07317 Flagellar regulator YcgR 12 115 8.0E-30 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YPO3220 f5df99447dd6ee3308344118b7a1df48 252 Gene3D G3DSA:2.40.10.220 119 246 5.9E-17 T 22-04-2016 YPO3220 f5df99447dd6ee3308344118b7a1df48 252 Gene3D G3DSA:2.30.110.10 13 118 6.1E-14 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPO2076 b57e73dea97e6a7c2f3b8b21224ce6df 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 3.0E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPO2076 b57e73dea97e6a7c2f3b8b21224ce6df 89 SUPERFAMILY SSF55229 32 85 1.44E-17 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPO2076 b57e73dea97e6a7c2f3b8b21224ce6df 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.0E-33 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPO2076 b57e73dea97e6a7c2f3b8b21224ce6df 89 PANTHER PTHR33404 1 89 1.0E-37 T 22-04-2016 YPO2076 b57e73dea97e6a7c2f3b8b21224ce6df 89 Gene3D G3DSA:3.30.1070.10 31 86 2.1E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPO2076 b57e73dea97e6a7c2f3b8b21224ce6df 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.604 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.262 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 SUPERFAMILY SSF54534 283 385 4.51E-33 T 22-04-2016 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 Gene3D G3DSA:3.10.50.40 167 278 2.2E-31 T 22-04-2016 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 Gene3D G3DSA:3.10.50.40 281 406 5.0E-37 T 22-04-2016 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 Pfam PF00639 PPIC-type PPIASE domain 178 272 1.2E-19 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 Pfam PF00639 PPIC-type PPIASE domain 289 381 7.0E-26 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 SUPERFAMILY SSF54534 173 277 3.27E-28 T 22-04-2016 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 Pfam PF09312 SurA N-terminal domain 25 142 1.1E-46 T 22-04-2016 IPR015391 SurA N-terminal YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 PANTHER PTHR10657:SF15 1 427 4.4E-176 T 22-04-2016 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 PANTHER PTHR10657 1 427 4.4E-176 T 22-04-2016 YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 SUPERFAMILY SSF109998 25 201 2.55E-44 T 22-04-2016 IPR027304 Trigger factor/SurA domain YPO0494 32cf6c1eb1c0e70cce4cb283af51166d 434 Gene3D G3DSA:1.10.3120.10 37 115 2.0E-4 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YPO3259 7c8fe5d9bcdc3fa3ea507cdf08b07198 281 PANTHER PTHR30514:SF4 1 275 8.9E-134 T 22-04-2016 YPO3259 7c8fe5d9bcdc3fa3ea507cdf08b07198 281 SUPERFAMILY SSF46689 5 83 1.09E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3259 7c8fe5d9bcdc3fa3ea507cdf08b07198 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 75 3.6E-14 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPO3259 7c8fe5d9bcdc3fa3ea507cdf08b07198 281 Gene3D G3DSA:3.40.50.10490 70 258 4.9E-15 T 22-04-2016 YPO3259 7c8fe5d9bcdc3fa3ea507cdf08b07198 281 SUPERFAMILY SSF53697 98 257 5.34E-16 T 22-04-2016 YPO3259 7c8fe5d9bcdc3fa3ea507cdf08b07198 281 Gene3D G3DSA:1.10.10.10 5 69 6.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3259 7c8fe5d9bcdc3fa3ea507cdf08b07198 281 PANTHER PTHR30514 1 275 8.9E-134 T 22-04-2016 YPO3259 7c8fe5d9bcdc3fa3ea507cdf08b07198 281 Pfam PF01380 SIS domain 128 251 1.5E-14 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00668 Condensation domain 112 409 7.4E-71 T 22-04-2016 IPR001242 Condensation domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00668 Condensation domain 1495 1778 7.3E-35 T 22-04-2016 IPR001242 Condensation domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF47336 21 124 3.89E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF52777 296 536 1.11E-37 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF08242 Methyltransferase domain 1182 1279 3.3E-9 T 22-04-2016 IPR013217 Methyltransferase type 12 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF47336 1405 1475 5.61E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.30.300.30 962 1014 2.9E-30 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.30.300.30 1349 1413 2.9E-30 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.40.50.980 568 715 2.6E-34 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:1.10.1200.10 22 92 1.4E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:1.10.1200.10 1938 2015 4.2E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:1.10.1200.10 1414 1476 5.8E-21 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:2.30.38.10 880 956 1.8E-22 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SMART SM00823 Phosphopantetheine attachment site 1949 2017 0.0012 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SMART SM00823 Phosphopantetheine attachment site 1410 1478 0.12 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.40.50.150 1162 1289 3.8E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF52777 117 289 1.56E-18 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF08415 Nonribosomal peptide synthase 431 486 3.2E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF08415 Nonribosomal peptide synthase 1802 1858 6.0E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 PANTHER PTHR24095:SF137 1337 1805 0.0 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 PANTHER PTHR24095:SF137 22 1003 0.0 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Gene3D G3DSA:3.40.50.980 716 872 5.2E-42 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF52777 1489 1680 5.56E-20 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 ProSitePatterns PS00012 Phosphopantetheine attachment site. 47 62 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF52777 1669 1908 5.0E-40 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00501 AMP-binding enzyme 575 965 5.1E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF56801 549 1018 1.96E-137 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF56801 1344 1422 1.96E-137 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF47336 1946 2014 1.87E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 SUPERFAMILY SSF53335 1164 1320 1.69E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00550 Phosphopantetheine attachment site 22 82 9.6E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00550 Phosphopantetheine attachment site 1952 2013 4.1E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 Pfam PF00550 Phosphopantetheine attachment site 1412 1473 3.3E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 594 990 5.6E-119 T 22-04-2016 IPR010071 Amino acid adenylation domain YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 PANTHER PTHR24095 1337 1805 0.0 T 22-04-2016 YPO1911 6a9bb85f5a280c0aceed2f9fa1897c9b 2035 PANTHER PTHR24095 22 1003 0.0 T 22-04-2016 YPO2065 aa7b6561cc9d57fc83612a68f26bfd55 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.5E-28 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPO2065 aa7b6561cc9d57fc83612a68f26bfd55 289 SUPERFAMILY SSF46689 1 80 9.14E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2065 aa7b6561cc9d57fc83612a68f26bfd55 289 PANTHER PTHR30514:SF7 1 271 9.7E-198 T 22-04-2016 YPO2065 aa7b6561cc9d57fc83612a68f26bfd55 289 Pfam PF01380 SIS domain 124 252 2.1E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO2065 aa7b6561cc9d57fc83612a68f26bfd55 289 Gene3D G3DSA:1.10.10.10 1 80 3.8E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2065 aa7b6561cc9d57fc83612a68f26bfd55 289 PANTHER PTHR30514 1 271 9.7E-198 T 22-04-2016 YPO2065 aa7b6561cc9d57fc83612a68f26bfd55 289 SUPERFAMILY SSF53697 94 277 1.01E-42 T 22-04-2016 YPO2065 aa7b6561cc9d57fc83612a68f26bfd55 289 Gene3D G3DSA:3.40.50.10490 97 270 2.3E-39 T 22-04-2016 YPO0037 1829953227a41b5bb1c8b893adf791dc 230 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.1E-24 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 YPO0037 1829953227a41b5bb1c8b893adf791dc 230 Pfam PF00588 SpoU rRNA Methylase family 20 159 7.1E-36 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPO0037 1829953227a41b5bb1c8b893adf791dc 230 PANTHER PTHR12029:SF45 1 189 1.1E-77 T 22-04-2016 YPO0037 1829953227a41b5bb1c8b893adf791dc 230 PANTHER PTHR12029 1 189 1.1E-77 T 22-04-2016 YPO0037 1829953227a41b5bb1c8b893adf791dc 230 SUPERFAMILY SSF75217 4 174 2.16E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPO0037 1829953227a41b5bb1c8b893adf791dc 230 Gene3D G3DSA:3.40.1280.10 14 173 1.7E-48 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO2212 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 Pfam PF01300 Telomere recombination 23 198 1.3E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YPO2212 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 SUPERFAMILY SSF55821 1 203 1.86E-66 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPO2212 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 PANTHER PTHR17490:SF7 1 206 4.9E-106 T 22-04-2016 YPO2212 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 Gene3D G3DSA:3.90.870.10 2 203 5.0E-66 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPO2212 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 5.8E-74 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YPO2212 0b5a91ad9f2f3aeda04b0f7b15fd1c97 206 PANTHER PTHR17490 1 206 4.9E-106 T 22-04-2016 YPO2619 58f0b8047e7047f6b9c8f4192c0b67f2 370 SUPERFAMILY SSF52540 136 312 1.87E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2619 58f0b8047e7047f6b9c8f4192c0b67f2 370 Gene3D G3DSA:3.40.50.300 137 340 2.7E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2619 58f0b8047e7047f6b9c8f4192c0b67f2 370 PANTHER PTHR30473:SF1 2 363 5.9E-221 T 22-04-2016 YPO2619 58f0b8047e7047f6b9c8f4192c0b67f2 370 PANTHER PTHR30473 2 363 5.9E-221 T 22-04-2016 YPO2619 58f0b8047e7047f6b9c8f4192c0b67f2 370 Pfam PF02562 PhoH-like protein 137 340 8.3E-95 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 YPO3514a fdfab9e0056fffa510c7a5872e7c4bb3 91 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 1.3E-38 T 22-04-2016 YPO3514a fdfab9e0056fffa510c7a5872e7c4bb3 91 SUPERFAMILY SSF47413 4 72 6.75E-31 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3514a fdfab9e0056fffa510c7a5872e7c4bb3 91 Gene3D G3DSA:1.10.260.40 2 72 1.2E-40 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0045 9ab99f9e3e64a0bcb7222fa44029c815 215 Pfam PF00156 Phosphoribosyl transferase domain 49 159 9.5E-12 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPO0045 9ab99f9e3e64a0bcb7222fa44029c815 215 PANTHER PTHR19278:SF36 1 213 8.0E-151 T 22-04-2016 YPO0045 9ab99f9e3e64a0bcb7222fa44029c815 215 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 215 35.258 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO0045 9ab99f9e3e64a0bcb7222fa44029c815 215 SUPERFAMILY SSF53271 2 212 3.98E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO0045 9ab99f9e3e64a0bcb7222fa44029c815 215 Gene3D G3DSA:3.40.50.2020 7 212 4.3E-81 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO0045 9ab99f9e3e64a0bcb7222fa44029c815 215 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.6E-66 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO0045 9ab99f9e3e64a0bcb7222fa44029c815 215 PANTHER PTHR19278 1 213 8.0E-151 T 22-04-2016 YPO2356 a4768dc5e1796488c1c4b179592f5e8d 321 Gene3D G3DSA:1.10.3720.10 68 141 4.6E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2356 a4768dc5e1796488c1c4b179592f5e8d 321 Gene3D G3DSA:1.10.3720.10 181 306 4.6E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2356 a4768dc5e1796488c1c4b179592f5e8d 321 SUPERFAMILY SSF161098 69 138 3.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2356 a4768dc5e1796488c1c4b179592f5e8d 321 SUPERFAMILY SSF161098 178 300 3.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2356 a4768dc5e1796488c1c4b179592f5e8d 321 PANTHER PTHR30465:SF65 1 147 4.1E-193 T 22-04-2016 YPO2356 a4768dc5e1796488c1c4b179592f5e8d 321 PANTHER PTHR30465:SF65 172 315 4.1E-193 T 22-04-2016 YPO2356 a4768dc5e1796488c1c4b179592f5e8d 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 5.1E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2356 a4768dc5e1796488c1c4b179592f5e8d 321 PANTHER PTHR30465 1 147 4.1E-193 T 22-04-2016 YPO2356 a4768dc5e1796488c1c4b179592f5e8d 321 PANTHER PTHR30465 172 315 4.1E-193 T 22-04-2016 YPO2969 b4db0443115485606f2fb1e1ddfba28f 189 Pfam PF12838 4Fe-4S dicluster domain 67 118 1.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2969 b4db0443115485606f2fb1e1ddfba28f 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2969 b4db0443115485606f2fb1e1ddfba28f 189 Gene3D G3DSA:3.30.70.20 109 187 3.4E-10 T 22-04-2016 YPO2969 b4db0443115485606f2fb1e1ddfba28f 189 Pfam PF00037 4Fe-4S binding domain 165 185 7.0E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2969 b4db0443115485606f2fb1e1ddfba28f 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2969 b4db0443115485606f2fb1e1ddfba28f 189 Gene3D G3DSA:3.30.70.20 65 108 1.3E-10 T 22-04-2016 YPO2969 b4db0443115485606f2fb1e1ddfba28f 189 SUPERFAMILY SSF54862 59 187 1.79E-18 T 22-04-2016 YPO3079 d8c0f864bef792fd85657b6fc7eeff92 228 SMART SM00382 35 223 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3079 d8c0f864bef792fd85657b6fc7eeff92 228 PANTHER PTHR24220:SF509 8 227 8.6E-116 T 22-04-2016 YPO3079 d8c0f864bef792fd85657b6fc7eeff92 228 Pfam PF00005 ABC transporter 27 174 7.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3079 d8c0f864bef792fd85657b6fc7eeff92 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3079 d8c0f864bef792fd85657b6fc7eeff92 228 SUPERFAMILY SSF52540 6 227 7.18E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3079 d8c0f864bef792fd85657b6fc7eeff92 228 Gene3D G3DSA:3.40.50.300 5 227 2.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3079 d8c0f864bef792fd85657b6fc7eeff92 228 PANTHER PTHR24220 8 227 8.6E-116 T 22-04-2016 YPO3070 20da40b0884dc10af5828f3d0edb8286 118 SUPERFAMILY SSF52833 3 117 4.48E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3070 20da40b0884dc10af5828f3d0edb8286 118 Gene3D G3DSA:3.40.30.10 1 117 6.3E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3070 20da40b0884dc10af5828f3d0edb8286 118 PANTHER PTHR30041 1 117 4.1E-72 T 22-04-2016 YPO3070 20da40b0884dc10af5828f3d0edb8286 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 117 8.7E-48 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 YPO3070 20da40b0884dc10af5828f3d0edb8286 118 PANTHER PTHR30041:SF4 1 117 4.1E-72 T 22-04-2016 YPO3070 20da40b0884dc10af5828f3d0edb8286 118 Pfam PF03960 ArsC family 7 116 6.6E-23 T 22-04-2016 IPR006660 Arsenate reductase-like YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Pfam PF00975 Thioesterase domain 1652 1750 4.6E-13 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Pfam PF00668 Condensation domain 82 377 3.0E-35 T 22-04-2016 IPR001242 Condensation domain YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 SUPERFAMILY SSF53474 1647 1934 7.94E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 PANTHER PTHR24096:SF179 453 528 1.3E-293 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 PANTHER PTHR24096:SF179 563 1021 1.3E-293 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 PANTHER PTHR24096:SF179 1493 1568 1.3E-293 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 SUPERFAMILY SSF52777 81 263 7.0E-17 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 597 990 3.8E-111 T 22-04-2016 IPR010071 Amino acid adenylation domain YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 SUPERFAMILY SSF52777 253 505 5.78E-41 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Pfam PF00501 AMP-binding enzyme 579 966 4.1E-82 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Gene3D G3DSA:3.40.50.980 718 878 2.5E-43 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 SUPERFAMILY SSF56801 1483 1528 1.57E-126 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 SUPERFAMILY SSF56801 537 1003 1.57E-126 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 PANTHER PTHR24096 453 528 1.3E-293 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 PANTHER PTHR24096 563 1021 1.3E-293 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 PANTHER PTHR24096 1493 1568 1.3E-293 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Pfam PF08242 Methyltransferase domain 1298 1397 1.2E-16 T 22-04-2016 IPR013217 Methyltransferase type 12 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Gene3D G3DSA:3.40.50.1820 1865 1934 1.1E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Gene3D G3DSA:3.40.50.1820 1646 1753 1.1E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Pfam PF00550 Phosphopantetheine attachment site 1557 1613 2.3E-4 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Gene3D G3DSA:3.30.300.30 961 1018 6.3E-29 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Gene3D G3DSA:3.30.300.30 1482 1549 6.3E-29 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Gene3D G3DSA:1.10.1200.10 1550 1620 3.3E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Gene3D G3DSA:3.40.50.150 1263 1449 2.8E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1567 1582 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Gene3D G3DSA:2.30.38.10 879 956 2.7E-22 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 SUPERFAMILY SSF47336 1540 1614 2.49E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Gene3D G3DSA:3.40.50.980 569 717 3.3E-33 T 22-04-2016 YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 SUPERFAMILY SSF53335 1273 1465 3.5E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0776 f7b2c70d4ddf737cca0ffced8a60271b 1939 Pfam PF08415 Nonribosomal peptide synthase 400 461 1.1E-16 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 SUPERFAMILY SSF56634 4 479 7.59E-211 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 Gene3D G3DSA:2.40.180.10 3 358 3.3E-174 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 Pfam PF00199 Catalase 9 389 2.5E-187 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 PANTHER PTHR11465 8 479 4.9E-298 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 PIRSF PIRSF038928 1 480 6.3E-220 T 22-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 Pfam PF06628 Catalase-related immune-responsive 417 477 1.6E-21 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 ProSitePatterns PS00438 Catalase proximal active site signature. 45 61 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 322 348 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 125 143 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 106 123 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 85 103 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 290 317 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 PRINTS PR00067 Catalase signature 22 45 1.1E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1207 12014d6c027a795cb412c4cb2c5f9a98 480 SMART SM01060 9 393 4.3E-281 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 PANTHER PTHR30525 1 398 1.9E-236 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 SUPERFAMILY SSF51735 2 150 2.9E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 395 9.6E-178 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 PIRSF PIRSF006205 1 398 1.1E-154 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 3.1E-47 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 SUPERFAMILY SSF69055 301 395 7.19E-29 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 4.1E-37 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 Gene3D G3DSA:3.40.50.720 1 150 3.7E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.305 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 2.8E-39 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 Gene3D G3DSA:1.10.1740.10 313 395 4.4E-28 T 22-04-2016 YPO1048 69e0a2bb7ad0204e8234b04c1d814739 398 SUPERFAMILY SSF55347 126 274 6.54E-64 T 22-04-2016 YPO4044 041fd720be96d3b4e9b5622b4a6bf99a 185 Pfam PF00419 Fimbrial protein 32 184 1.6E-14 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO4044 041fd720be96d3b4e9b5622b4a6bf99a 185 SUPERFAMILY SSF49401 32 185 2.58E-36 T 22-04-2016 IPR008966 Adhesion domain YPO4044 041fd720be96d3b4e9b5622b4a6bf99a 185 Gene3D G3DSA:2.60.40.1090 30 185 3.8E-40 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO4044 041fd720be96d3b4e9b5622b4a6bf99a 185 PANTHER PTHR33420:SF11 5 185 3.6E-81 T 22-04-2016 YPO4044 041fd720be96d3b4e9b5622b4a6bf99a 185 PANTHER PTHR33420 5 185 3.6E-81 T 22-04-2016 YPO3625 b4c19e8a1ec54064eb26c48c74b0121d 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 1.3E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPO3625 b4c19e8a1ec54064eb26c48c74b0121d 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 380 70.053 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 YPO3625 b4c19e8a1ec54064eb26c48c74b0121d 382 Gene3D G3DSA:3.20.20.30 4 253 3.3E-104 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPO3625 b4c19e8a1ec54064eb26c48c74b0121d 382 Gene3D G3DSA:3.20.20.30 287 350 3.3E-104 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPO3625 b4c19e8a1ec54064eb26c48c74b0121d 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 3.9E-189 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 YPO3625 b4c19e8a1ec54064eb26c48c74b0121d 382 PANTHER PTHR30011:SF1 1 380 3.3E-223 T 22-04-2016 YPO3625 b4c19e8a1ec54064eb26c48c74b0121d 382 PANTHER PTHR30011 1 380 3.3E-223 T 22-04-2016 YPO3625 b4c19e8a1ec54064eb26c48c74b0121d 382 SUPERFAMILY SSF51679 4 349 3.27E-98 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPO0558 a554cb03a65e4302dc1e317f4da8b445 275 PANTHER PTHR35851:SF1 7 269 6.6E-86 T 22-04-2016 YPO0558 a554cb03a65e4302dc1e317f4da8b445 275 PANTHER PTHR35851 7 269 6.6E-86 T 22-04-2016 YPO0558 a554cb03a65e4302dc1e317f4da8b445 275 Pfam PF03799 Cell division protein FtsQ 130 244 1.5E-25 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB YPO0558 a554cb03a65e4302dc1e317f4da8b445 275 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 252 24.602 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 YPO0558 a554cb03a65e4302dc1e317f4da8b445 275 Pfam PF08478 POTRA domain, FtsQ-type 57 126 3.3E-22 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type YPO1672 a693aae6bdaf3d3892ed6ba5a4bb4725 1268 Gene3D G3DSA:2.40.128.130 947 1268 1.4E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO1672 a693aae6bdaf3d3892ed6ba5a4bb4725 1268 PANTHER PTHR35037 1 1268 0.0 T 22-04-2016 YPO1672 a693aae6bdaf3d3892ed6ba5a4bb4725 1268 SUPERFAMILY SSF103515 951 1268 1.57E-39 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO1672 a693aae6bdaf3d3892ed6ba5a4bb4725 1268 SMART SM00869 989 1253 8.1E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO1672 a693aae6bdaf3d3892ed6ba5a4bb4725 1268 Pfam PF03797 Autotransporter beta-domain 989 1250 5.5E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO1672 a693aae6bdaf3d3892ed6ba5a4bb4725 1268 PANTHER PTHR35037:SF1 1 1268 0.0 T 22-04-2016 YPO1672 a693aae6bdaf3d3892ed6ba5a4bb4725 1268 Gene3D G3DSA:2.160.20.20 403 946 3.8E-21 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO1672 a693aae6bdaf3d3892ed6ba5a4bb4725 1268 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 821 1268 8.9E-79 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO1672 a693aae6bdaf3d3892ed6ba5a4bb4725 1268 SUPERFAMILY SSF51126 390 934 5.34E-35 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO0669 763301205f03ded696dc0f04818ba119 303 SUPERFAMILY SSF53850 91 294 5.25E-36 T 22-04-2016 YPO0669 763301205f03ded696dc0f04818ba119 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0669 763301205f03ded696dc0f04818ba119 303 SUPERFAMILY SSF46785 3 112 1.86E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0669 763301205f03ded696dc0f04818ba119 303 Gene3D G3DSA:1.10.10.10 2 84 3.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0669 763301205f03ded696dc0f04818ba119 303 PANTHER PTHR30537 1 303 1.8E-212 T 22-04-2016 YPO0669 763301205f03ded696dc0f04818ba119 303 PANTHER PTHR30537:SF20 1 303 1.8E-212 T 22-04-2016 YPO0669 763301205f03ded696dc0f04818ba119 303 Pfam PF03466 LysR substrate binding domain 91 292 6.0E-35 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0669 763301205f03ded696dc0f04818ba119 303 Gene3D G3DSA:3.40.190.10 93 192 2.2E-24 T 22-04-2016 YPO3686 f374b66684a69a6305aab915e7e7271c 651 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 651 55.618 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 YPO3686 f374b66684a69a6305aab915e7e7271c 651 PANTHER PTHR30509 303 636 0.0 T 22-04-2016 YPO3686 f374b66684a69a6305aab915e7e7271c 651 PANTHER PTHR30509 1 253 0.0 T 22-04-2016 YPO3686 f374b66684a69a6305aab915e7e7271c 651 Pfam PF04632 Fusaric acid resistance protein family 8 649 5.9E-171 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 YPO3686 f374b66684a69a6305aab915e7e7271c 651 PANTHER PTHR30509:SF10 303 636 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 YPO3686 f374b66684a69a6305aab915e7e7271c 651 PANTHER PTHR30509:SF10 1 253 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 PANTHER PTHR11851:SF135 5 396 0.0 T 22-04-2016 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 PANTHER PTHR11851:SF135 413 931 0.0 T 22-04-2016 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 PANTHER PTHR11851 5 396 0.0 T 22-04-2016 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 PANTHER PTHR11851 413 931 0.0 T 22-04-2016 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 267 504 4.23E-65 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 509 726 3.3E-60 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 77 100 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 727 956 2.9E-53 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF00675 Insulinase (Peptidase family M16) 57 193 1.6E-33 T 22-04-2016 IPR011765 Peptidase M16, N-terminal YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 33 267 1.6E-63 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF16187 Middle or third domain of peptidase_M16 402 676 6.5E-56 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF05193 Peptidase M16 inactive domain 218 394 5.7E-19 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 Pfam PF05193 Peptidase M16 inactive domain 683 859 2.1E-9 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 35 263 6.23E-52 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 506 727 5.32E-46 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 Gene3D G3DSA:3.30.830.10 275 508 2.5E-63 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YPO1019 fc4adf2a95193fc0becb9c777c86a593 962 SUPERFAMILY SSF63411 740 933 2.0E-44 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 372 394 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 206 221 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 294 308 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 322 337 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 430 445 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 257 277 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 503 519 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 478 494 3.8E-59 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 ProSitePatterns PS00512 Alpha-galactosidase signature. 323 338 - T 22-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 Gene3D G3DSA:3.20.20.70 291 575 7.9E-43 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PANTHER PTHR22762:SF81 295 524 4.7E-58 T 22-04-2016 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 SUPERFAMILY SSF51445 289 621 1.45E-108 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 Pfam PF02065 Melibiase 254 592 2.5E-122 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 24 237 5.0E-44 T 22-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PANTHER PTHR22762 295 524 4.7E-58 T 22-04-2016 YPO1581 16de7cf1588b7f14a44cd89d7ea2e2f6 708 PIRSF PIRSF005536 1 707 3.4E-256 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 PANTHER PTHR24220 3 303 4.3E-200 T 22-04-2016 YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.6E-195 T 22-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 SMART SM00930 265 340 6.4E-24 T 22-04-2016 IPR018449 NIL domain YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 Pfam PF09383 NIL domain 268 339 6.3E-18 T 22-04-2016 IPR018449 NIL domain YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 SUPERFAMILY SSF55021 248 343 1.26E-24 T 22-04-2016 YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 PANTHER PTHR24220:SF455 3 303 4.3E-200 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 Gene3D G3DSA:3.40.50.300 1 237 1.4E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 SUPERFAMILY SSF52540 1 240 6.19E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 SMART SM00382 30 217 4.3E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 Pfam PF00005 ABC transporter 21 169 4.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1073 cd4e07122b61efbf9ae8ce99c2bdf282 343 Gene3D G3DSA:3.30.70.260 238 343 2.9E-30 T 22-04-2016 YPO2195 e14c0f10b5f1592b22c441d586064e53 149 SUPERFAMILY SSF54637 15 137 4.84E-39 T 22-04-2016 IPR029069 HotDog domain YPO2195 e14c0f10b5f1592b22c441d586064e53 149 Pfam PF03061 Thioesterase superfamily 33 104 1.6E-18 T 22-04-2016 IPR006683 Thioesterase domain YPO2195 e14c0f10b5f1592b22c441d586064e53 149 PANTHER PTHR11049:SF5 11 144 1.9E-80 T 22-04-2016 YPO2195 e14c0f10b5f1592b22c441d586064e53 149 PANTHER PTHR11049 11 144 1.9E-80 T 22-04-2016 YPO2195 e14c0f10b5f1592b22c441d586064e53 149 Gene3D G3DSA:3.10.129.10 13 137 1.7E-42 T 22-04-2016 IPR029069 HotDog domain YPO3052 0130fd972b2e1987561ffd590eb1e807 132 SUPERFAMILY SSF52833 11 123 6.86E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3052 0130fd972b2e1987561ffd590eb1e807 132 PANTHER PTHR30041:SF3 10 123 6.9E-39 T 22-04-2016 YPO3052 0130fd972b2e1987561ffd590eb1e807 132 PANTHER PTHR30041 10 123 6.9E-39 T 22-04-2016 YPO3052 0130fd972b2e1987561ffd590eb1e807 132 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 10 124 2.1E-42 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR YPO3052 0130fd972b2e1987561ffd590eb1e807 132 Gene3D G3DSA:3.40.30.10 10 123 5.2E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3052 0130fd972b2e1987561ffd590eb1e807 132 Pfam PF03960 ArsC family 13 122 1.8E-14 T 22-04-2016 IPR006660 Arsenate reductase-like YPO3381 919954e32f193e231f027cfc54b6d843 930 Pfam PF00072 Response regulator receiver domain 670 781 7.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3381 919954e32f193e231f027cfc54b6d843 930 Gene3D G3DSA:3.30.565.10 342 518 5.4E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3381 919954e32f193e231f027cfc54b6d843 930 Gene3D G3DSA:3.40.50.2300 657 784 5.0E-33 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 SMART SM00073 828 924 7.9E-4 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO3381 919954e32f193e231f027cfc54b6d843 930 SUPERFAMILY SSF52172 534 647 2.05E-5 T 22-04-2016 IPR011006 CheY-like superfamily YPO3381 919954e32f193e231f027cfc54b6d843 930 SMART SM00304 199 251 1.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO3381 919954e32f193e231f027cfc54b6d843 930 SUPERFAMILY SSF55874 345 517 1.17E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3381 919954e32f193e231f027cfc54b6d843 930 SMART SM00387 403 519 1.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3381 919954e32f193e231f027cfc54b6d843 930 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 176 4.0E-56 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal YPO3381 919954e32f193e231f027cfc54b6d843 930 Gene3D G3DSA:1.20.120.160 830 927 4.7E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO3381 919954e32f193e231f027cfc54b6d843 930 SMART SM00388 291 356 2.3E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3381 919954e32f193e231f027cfc54b6d843 930 SMART SM00448 668 781 4.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3381 919954e32f193e231f027cfc54b6d843 930 PANTHER PTHR24423 573 832 2.9E-218 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 PANTHER PTHR24423 193 230 2.9E-218 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 PANTHER PTHR24423 270 522 2.9E-218 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 PANTHER PTHR24423 6 20 2.9E-218 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 SUPERFAMILY SSF47226 764 777 7.07E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO3381 919954e32f193e231f027cfc54b6d843 930 SUPERFAMILY SSF47226 818 919 7.07E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO3381 919954e32f193e231f027cfc54b6d843 930 Gene3D G3DSA:1.10.287.130 283 341 4.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3381 919954e32f193e231f027cfc54b6d843 930 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 518 1.7E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3381 919954e32f193e231f027cfc54b6d843 930 Pfam PF01627 Hpt domain 838 919 7.5E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YPO3381 919954e32f193e231f027cfc54b6d843 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 8.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3381 919954e32f193e231f027cfc54b6d843 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 8.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3381 919954e32f193e231f027cfc54b6d843 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 8.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3381 919954e32f193e231f027cfc54b6d843 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 8.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3381 919954e32f193e231f027cfc54b6d843 930 SUPERFAMILY SSF158472 199 248 2.22E-5 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 SUPERFAMILY SSF47384 277 357 3.14E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3381 919954e32f193e231f027cfc54b6d843 930 SUPERFAMILY SSF52172 668 786 1.42E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPO3381 919954e32f193e231f027cfc54b6d843 930 PANTHER PTHR24423:SF540 573 832 2.9E-218 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 PANTHER PTHR24423:SF540 193 230 2.9E-218 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 PANTHER PTHR24423:SF540 270 522 2.9E-218 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 PANTHER PTHR24423:SF540 6 20 2.9E-218 T 22-04-2016 YPO3381 919954e32f193e231f027cfc54b6d843 930 Pfam PF00672 HAMP domain 181 247 5.3E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO3381 919954e32f193e231f027cfc54b6d843 930 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 355 1.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:3.40.50.150 232 429 2.0E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:1.10.940.10 3 147 2.8E-45 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.9E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 SUPERFAMILY SSF48013 6 149 4.91E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 PANTHER PTHR22807 33 429 1.1E-145 T 22-04-2016 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 SUPERFAMILY SSF53335 142 429 8.29E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 70.041 T 22-04-2016 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 9.1E-77 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 PANTHER PTHR22807:SF30 33 429 1.1E-145 T 22-04-2016 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:3.30.70.1170 173 230 2.1E-26 T 22-04-2016 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 2.9E-174 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 Pfam PF01029 NusB family 7 127 8.1E-25 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPO0240 2c9c6315e1c5cb203e02475cfb37b0ab 429 Gene3D G3DSA:1.10.287.730 148 172 1.5E-14 T 22-04-2016 YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 Pfam PF05175 Methyltransferase small domain 133 215 1.3E-15 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 9.1E-100 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 Gene3D G3DSA:3.40.50.150 108 290 2.3E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 PIRSF PIRSF037167 2 307 2.2E-147 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 Gene3D G3DSA:1.10.8.10 15 106 1.2E-4 T 22-04-2016 YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.1E-136 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 SUPERFAMILY SSF53335 15 294 3.5E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.115 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 PANTHER PTHR18895:SF66 4 299 1.7E-191 T 22-04-2016 YPO2750 05aa6410f6aa6072815a5ca6138aad49 310 PANTHER PTHR18895 4 299 1.7E-191 T 22-04-2016 YPO1982 eae47a46d6dc05c7360745dc04398a7c 320 Gene3D G3DSA:3.40.50.720 1 237 9.7E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1982 eae47a46d6dc05c7360745dc04398a7c 320 PANTHER PTHR10366 3 251 2.6E-93 T 22-04-2016 YPO1982 eae47a46d6dc05c7360745dc04398a7c 320 PANTHER PTHR10366 277 320 2.6E-93 T 22-04-2016 YPO1982 eae47a46d6dc05c7360745dc04398a7c 320 PANTHER PTHR10366:SF418 3 251 2.6E-93 T 22-04-2016 YPO1982 eae47a46d6dc05c7360745dc04398a7c 320 PANTHER PTHR10366:SF418 277 320 2.6E-93 T 22-04-2016 YPO1982 eae47a46d6dc05c7360745dc04398a7c 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 167 1.4E-21 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO1982 eae47a46d6dc05c7360745dc04398a7c 320 SUPERFAMILY SSF51735 1 250 4.35E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1982 eae47a46d6dc05c7360745dc04398a7c 320 SUPERFAMILY SSF51735 289 319 4.35E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0824 780b023525f6b765df27d1dfb206d27e 1037 PANTHER PTHR37322:SF2 1 1037 0.0 T 22-04-2016 YPO0824 780b023525f6b765df27d1dfb206d27e 1037 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 641 893 1.3E-32 T 22-04-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 YPO0824 780b023525f6b765df27d1dfb206d27e 1037 SUPERFAMILY SSF49863 915 1036 1.61E-41 T 22-04-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 YPO0824 780b023525f6b765df27d1dfb206d27e 1037 Gene3D G3DSA:1.50.10.100 248 633 3.3E-128 T 22-04-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 YPO0824 780b023525f6b765df27d1dfb206d27e 1037 Gene3D G3DSA:2.60.220.10 915 1036 1.5E-41 T 22-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 YPO0824 780b023525f6b765df27d1dfb206d27e 1037 SUPERFAMILY SSF74650 635 909 1.2E-84 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPO0824 780b023525f6b765df27d1dfb206d27e 1037 Gene3D G3DSA:2.60.120.410 40 244 4.0E-76 T 22-04-2016 IPR015176 Lyase, N-terminal YPO0824 780b023525f6b765df27d1dfb206d27e 1037 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 916 977 5.9E-5 T 22-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 YPO0824 780b023525f6b765df27d1dfb206d27e 1037 SUPERFAMILY SSF49785 34 244 1.87E-82 T 22-04-2016 IPR008979 Galactose-binding domain-like YPO0824 780b023525f6b765df27d1dfb206d27e 1037 Pfam PF09093 Lyase, catalytic 258 619 8.8E-132 T 22-04-2016 IPR015177 Lyase, catalytic YPO0824 780b023525f6b765df27d1dfb206d27e 1037 PIRSF PIRSF034515 5 1037 0.0 T 22-04-2016 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 YPO0824 780b023525f6b765df27d1dfb206d27e 1037 PANTHER PTHR37322 1 1037 0.0 T 22-04-2016 YPO0824 780b023525f6b765df27d1dfb206d27e 1037 SUPERFAMILY SSF48230 247 633 6.41E-154 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YPO0824 780b023525f6b765df27d1dfb206d27e 1037 Pfam PF09092 Lyase, N terminal 47 242 1.8E-59 T 22-04-2016 IPR015176 Lyase, N-terminal YPO0824 780b023525f6b765df27d1dfb206d27e 1037 Gene3D G3DSA:2.70.98.10 635 907 1.3E-81 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YPO4096 5162596b6f26793daca5a54167218025 366 Gene3D G3DSA:3.10.150.10 1 121 2.1E-31 T 22-04-2016 YPO4096 5162596b6f26793daca5a54167218025 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 3.0E-40 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO4096 5162596b6f26793daca5a54167218025 366 PANTHER PTHR30478 2 366 8.7E-149 T 22-04-2016 YPO4096 5162596b6f26793daca5a54167218025 366 SUPERFAMILY SSF55979 245 366 3.14E-37 T 22-04-2016 YPO4096 5162596b6f26793daca5a54167218025 366 SMART SM00480 17 362 1.7E-165 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO4096 5162596b6f26793daca5a54167218025 366 Gene3D G3DSA:3.10.150.10 249 366 3.8E-38 T 22-04-2016 YPO4096 5162596b6f26793daca5a54167218025 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 6.8E-44 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO4096 5162596b6f26793daca5a54167218025 366 PIRSF PIRSF000804 1 366 5.0E-116 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO4096 5162596b6f26793daca5a54167218025 366 SUPERFAMILY SSF55979 125 244 3.62E-31 T 22-04-2016 YPO4096 5162596b6f26793daca5a54167218025 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 7.9E-38 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO4096 5162596b6f26793daca5a54167218025 366 Gene3D G3DSA:3.10.150.10 122 248 8.9E-40 T 22-04-2016 YPO4096 5162596b6f26793daca5a54167218025 366 SUPERFAMILY SSF55979 1 121 1.77E-26 T 22-04-2016 YPO4096 5162596b6f26793daca5a54167218025 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 2.1E-111 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO2151 e5bcadd6f0960c64ca7f7deed01cb57f 373 Pfam PF00892 EamA-like transporter family 164 292 1.0E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO2151 e5bcadd6f0960c64ca7f7deed01cb57f 373 Pfam PF00892 EamA-like transporter family 11 145 3.5E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO2151 e5bcadd6f0960c64ca7f7deed01cb57f 373 SUPERFAMILY SSF103481 59 148 4.18E-11 T 22-04-2016 YPO2151 e5bcadd6f0960c64ca7f7deed01cb57f 373 SUPERFAMILY SSF103481 207 297 5.89E-6 T 22-04-2016 YPO2734 71427ac5f2a1138ac477aac210d6ae51 218 Gene3D G3DSA:3.40.50.300 1 188 2.7E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2734 71427ac5f2a1138ac477aac210d6ae51 218 Pfam PF00005 ABC transporter 18 157 2.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2734 71427ac5f2a1138ac477aac210d6ae51 218 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 200 3.7E-80 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 YPO2734 71427ac5f2a1138ac477aac210d6ae51 218 SMART SM00382 26 207 7.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2734 71427ac5f2a1138ac477aac210d6ae51 218 PANTHER PTHR24220 3 188 1.1E-105 T 22-04-2016 YPO2734 71427ac5f2a1138ac477aac210d6ae51 218 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2734 71427ac5f2a1138ac477aac210d6ae51 218 SUPERFAMILY SSF52540 2 188 2.05E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2734 71427ac5f2a1138ac477aac210d6ae51 218 PANTHER PTHR24220:SF508 3 188 1.1E-105 T 22-04-2016 YPO3522 15c00941dae8fa3fcbce1993fe6f1861 118 PANTHER PTHR12510:SF6 1 116 8.1E-73 T 22-04-2016 YPO3522 15c00941dae8fa3fcbce1993fe6f1861 118 SUPERFAMILY SSF110857 1 112 1.31E-33 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like YPO3522 15c00941dae8fa3fcbce1993fe6f1861 118 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 3.9E-23 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like YPO3522 15c00941dae8fa3fcbce1993fe6f1861 118 PANTHER PTHR12510 1 116 8.1E-73 T 22-04-2016 YPO3522 15c00941dae8fa3fcbce1993fe6f1861 118 Gene3D G3DSA:3.10.490.10 1 114 4.0E-39 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 431 512 6.1E-22 T 22-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 Gene3D G3DSA:1.20.272.10 243 362 6.9E-49 T 22-04-2016 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.7E-42 T 22-04-2016 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 3.0E-134 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 Gene3D G3DSA:3.40.50.300 15 166 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 PANTHER PTHR11669:SF0 1 436 7.1E-183 T 22-04-2016 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 SUPERFAMILY SSF52540 35 222 1.98E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 SMART SM00382 37 178 1.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 514 655 2.2E-60 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 SUPERFAMILY SSF48019 243 367 1.87E-35 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 363 8.9E-32 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 PANTHER PTHR11669 1 436 7.1E-183 T 22-04-2016 YPO3122 e85b470eafdfd65054a943e5aad39b7e 658 Gene3D G3DSA:1.10.8.60 167 242 1.3E-31 T 22-04-2016 YPO1763 cb26528e7c217c38bb893fda80403228 465 PANTHER PTHR11699:SF213 1 463 5.7E-251 T 22-04-2016 YPO1763 cb26528e7c217c38bb893fda80403228 465 SUPERFAMILY SSF53720 3 457 9.42E-151 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPO1763 cb26528e7c217c38bb893fda80403228 465 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPO1763 cb26528e7c217c38bb893fda80403228 465 Gene3D G3DSA:3.40.309.10 258 403 3.8E-50 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO1763 cb26528e7c217c38bb893fda80403228 465 Gene3D G3DSA:3.40.605.10 4 257 2.4E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPO1763 cb26528e7c217c38bb893fda80403228 465 PANTHER PTHR11699 1 463 5.7E-251 T 22-04-2016 YPO1763 cb26528e7c217c38bb893fda80403228 465 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPO1763 cb26528e7c217c38bb893fda80403228 465 Gene3D G3DSA:3.40.309.10 404 431 1.8E-4 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO1763 cb26528e7c217c38bb893fda80403228 465 Pfam PF00171 Aldehyde dehydrogenase family 17 403 1.2E-136 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPO0234 80c7012d85026492b38fec236787e651 329 SMART SM00662 23 234 8.0E-106 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO0234 80c7012d85026492b38fec236787e651 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 3.9E-113 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0234 80c7012d85026492b38fec236787e651 329 Gene3D G3DSA:3.30.1360.10 9 57 1.5E-10 T 22-04-2016 YPO0234 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0234 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0234 80c7012d85026492b38fec236787e651 329 PANTHER PTHR32108:SF0 1 329 4.3E-160 T 22-04-2016 YPO0234 80c7012d85026492b38fec236787e651 329 PANTHER PTHR32108 1 329 4.3E-160 T 22-04-2016 YPO0234 80c7012d85026492b38fec236787e651 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.3E-23 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO0234 80c7012d85026492b38fec236787e651 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0234 80c7012d85026492b38fec236787e651 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0234 80c7012d85026492b38fec236787e651 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.661 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0234 80c7012d85026492b38fec236787e651 329 Gene3D G3DSA:2.170.120.12 58 177 1.8E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO0234 80c7012d85026492b38fec236787e651 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YPO0234 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF56553 53 178 1.17E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YPO0234 80c7012d85026492b38fec236787e651 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 22-04-2016 YPO0234 80c7012d85026492b38fec236787e651 329 Gene3D G3DSA:1.10.150.20 244 328 6.1E-38 T 22-04-2016 YPO3467 667449eec57136fca60e14f8ffbf72c3 147 SUPERFAMILY SSF50475 10 142 1.53E-12 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPO3467 667449eec57136fca60e14f8ffbf72c3 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 37.203 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 YPO3467 667449eec57136fca60e14f8ffbf72c3 147 PIRSF PIRSF009554 3 147 9.4E-65 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 YPO3467 667449eec57136fca60e14f8ffbf72c3 147 Gene3D G3DSA:2.30.110.10 6 144 3.6E-9 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 Gene3D G3DSA:4.10.640.10 8 74 7.9E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 PANTHER PTHR13479 2 74 2.7E-34 T 22-04-2016 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 Pfam PF01084 Ribosomal protein S18 19 68 4.2E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.759 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 SUPERFAMILY SSF46911 3 74 1.07E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.3E-36 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3537 3f4b75464bdfc56f443a4f9c474a954f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 1.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 8.2E-4 T 22-04-2016 YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PANTHER PTHR24322 165 196 2.0E-109 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PANTHER PTHR24322 17 149 2.0E-109 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 Gene3D G3DSA:3.40.50.720 7 246 1.4E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 SUPERFAMILY SSF51735 10 243 6.71E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 Pfam PF00106 short chain dehydrogenase 14 210 2.4E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PANTHER PTHR24322:SF337 165 196 2.0E-109 T 22-04-2016 YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 PANTHER PTHR24322:SF337 17 149 2.0E-109 T 22-04-2016 YPO2215 92a630ea8d6f50cbfef8e76a50df58d6 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO0865 2413967b98100f874de3237a587e8924 106 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 95 1.2E-34 T 22-04-2016 IPR024476 Protein of unknown function DUF3861 YPO1247 259a24e82ed9944d1db63e3d42e4dba4 351 Gene3D G3DSA:3.55.50.10 103 175 5.2E-28 T 22-04-2016 YPO1247 259a24e82ed9944d1db63e3d42e4dba4 351 PIRSF PIRSF004440 1 351 1.9E-67 T 22-04-2016 IPR026276 Baseplate protein GpP YPO1247 259a24e82ed9944d1db63e3d42e4dba4 351 Pfam PF05954 Phage late control gene D protein (GPD) 26 324 9.8E-16 T 22-04-2016 YPO1247 259a24e82ed9944d1db63e3d42e4dba4 351 SUPERFAMILY SSF69279 176 349 4.59E-42 T 22-04-2016 YPO1247 259a24e82ed9944d1db63e3d42e4dba4 351 Gene3D G3DSA:2.30.300.10 282 350 1.9E-63 T 22-04-2016 YPO1247 259a24e82ed9944d1db63e3d42e4dba4 351 Gene3D G3DSA:2.30.300.10 1 102 1.9E-63 T 22-04-2016 YPO1247 259a24e82ed9944d1db63e3d42e4dba4 351 SUPERFAMILY SSF69279 1 175 1.36E-51 T 22-04-2016 YPO3643 3a9072204569ef1d2b1f271c44259db4 70 PANTHER PTHR11544:SF54 1 70 3.3E-48 T 22-04-2016 YPO3643 3a9072204569ef1d2b1f271c44259db4 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.4E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO3643 3a9072204569ef1d2b1f271c44259db4 70 PRINTS PR00050 Cold shock protein signature 43 61 1.8E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO3643 3a9072204569ef1d2b1f271c44259db4 70 PRINTS PR00050 Cold shock protein signature 7 22 1.8E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO3643 3a9072204569ef1d2b1f271c44259db4 70 PRINTS PR00050 Cold shock protein signature 28 37 1.8E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO3643 3a9072204569ef1d2b1f271c44259db4 70 PIRSF PIRSF002599 1 70 1.5E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPO3643 3a9072204569ef1d2b1f271c44259db4 70 SMART SM00357 6 70 5.6E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO3643 3a9072204569ef1d2b1f271c44259db4 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YPO3643 3a9072204569ef1d2b1f271c44259db4 70 Gene3D G3DSA:2.40.50.140 5 68 3.0E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3643 3a9072204569ef1d2b1f271c44259db4 70 SUPERFAMILY SSF50249 3 69 8.74E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3643 3a9072204569ef1d2b1f271c44259db4 70 PANTHER PTHR11544 1 70 3.3E-48 T 22-04-2016 YPO3804 36b02e9f0f4548796be4b86fb5a603c6 233 Gene3D G3DSA:3.40.50.300 1 229 2.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3804 36b02e9f0f4548796be4b86fb5a603c6 233 Pfam PF00005 ABC transporter 17 161 1.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3804 36b02e9f0f4548796be4b86fb5a603c6 233 PANTHER PTHR24220:SF568 3 232 6.1E-138 T 22-04-2016 YPO3804 36b02e9f0f4548796be4b86fb5a603c6 233 PANTHER PTHR24220 3 232 6.1E-138 T 22-04-2016 YPO3804 36b02e9f0f4548796be4b86fb5a603c6 233 SUPERFAMILY SSF52540 2 230 5.01E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3804 36b02e9f0f4548796be4b86fb5a603c6 233 SMART SM00382 26 212 1.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3804 36b02e9f0f4548796be4b86fb5a603c6 233 PIRSF PIRSF039137 1 233 6.1E-102 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 YPO3804 36b02e9f0f4548796be4b86fb5a603c6 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 SUPERFAMILY SSF46785 28 98 3.42E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 PANTHER PTHR11751 30 102 4.1E-23 T 22-04-2016 YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 PANTHER PTHR11751 148 167 4.1E-23 T 22-04-2016 YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 4.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 4.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 93 2.0E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 SMART SM00866 115 251 7.9E-38 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 SMART SM00345 32 95 2.9E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 Gene3D G3DSA:3.40.1410.10 102 255 4.6E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 Pfam PF07702 UTRA domain 115 251 2.0E-38 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 Gene3D G3DSA:1.10.10.10 29 98 2.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1890 a2d60c45eb8361b23d609e3fe6a42adb 265 SUPERFAMILY SSF64288 102 256 1.52E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO2559 0e194c15d0515d6f0acc33661682eddb 197 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 174 5.0E-51 T 22-04-2016 YPO2559 0e194c15d0515d6f0acc33661682eddb 197 SUPERFAMILY SSF109604 2 191 1.39E-44 T 22-04-2016 YPO2559 0e194c15d0515d6f0acc33661682eddb 197 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 45.484 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 YPO2559 0e194c15d0515d6f0acc33661682eddb 197 SMART SM00471 24 149 2.0E-7 T 22-04-2016 IPR003607 HD/PDEase domain YPO2559 0e194c15d0515d6f0acc33661682eddb 197 Pfam PF13023 HD domain 9 159 2.8E-18 T 22-04-2016 IPR006674 HD domain YPO2559 0e194c15d0515d6f0acc33661682eddb 197 Gene3D G3DSA:1.10.3210.10 2 192 1.7E-50 T 22-04-2016 IPR006674 HD domain YPO2559 0e194c15d0515d6f0acc33661682eddb 197 PANTHER PTHR11845 1 188 3.1E-50 T 22-04-2016 YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF12804 MobA-like NTP transferase domain 8 122 1.0E-22 T 22-04-2016 IPR025877 MobA-like NTP transferase YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 SUPERFAMILY SSF53448 5 252 5.42E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.326 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 8.4E-205 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 6.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 299 2.3E-4 T 22-04-2016 IPR001451 Hexapeptide repeat YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 322 352 3.0E-4 T 22-04-2016 IPR001451 Hexapeptide repeat YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 SUPERFAMILY SSF51161 255 438 1.66E-51 T 22-04-2016 IPR011004 Trimeric LpxA-like YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 Gene3D G3DSA:2.160.10.10 324 455 1.9E-35 T 22-04-2016 YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 Gene3D G3DSA:3.90.550.10 1 244 3.8E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 PANTHER PTHR22572:SF115 7 449 6.7E-234 T 22-04-2016 YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 Gene3D G3DSA:2.160.10.10 245 323 1.2E-16 T 22-04-2016 YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 PANTHER PTHR22572 7 449 6.7E-234 T 22-04-2016 YPO4119 12b5d1f50f6d2f5cf1d0e8666014b627 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 Pfam PF00030 Beta/Gamma crystallin 113 206 1.3E-5 T 22-04-2016 IPR001064 Beta/gamma crystallin YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 SMART SM00247 26 110 0.18 T 22-04-2016 IPR001064 Beta/gamma crystallin YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 SMART SM00247 112 207 0.001 T 22-04-2016 IPR001064 Beta/gamma crystallin YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 SUPERFAMILY SSF49695 14 108 2.58E-15 T 22-04-2016 IPR011024 Gamma-crystallin-related YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 Pfam PF09101 Exotoxin A binding 345 403 3.5E-5 T 22-04-2016 IPR015185 Exotoxin A, binding YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 Gene3D G3DSA:2.60.20.10 107 210 7.7E-31 T 22-04-2016 YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 SUPERFAMILY SSF49695 99 206 4.83E-20 T 22-04-2016 IPR011024 Gamma-crystallin-related YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 Gene3D G3DSA:3.40.630.30 694 805 4.5E-4 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 Pfam PF08964 Beta/Gamma crystallin 25 90 4.1E-7 T 22-04-2016 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal GO:0016020|GO:0016337 YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 Gene3D G3DSA:2.60.20.10 25 106 5.0E-23 T 22-04-2016 YPO2884 ee024b72d55fafc1a6aa7a72e5dc6348 806 Gene3D G3DSA:2.60.120.200 352 403 3.1E-4 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain YPO3950 c34ac3067e1732a9ea91fe1baf7c9786 194 PANTHER PTHR33508:SF4 1 192 7.0E-94 T 22-04-2016 YPO3950 c34ac3067e1732a9ea91fe1baf7c9786 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 188 5.2E-31 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPO3950 c34ac3067e1732a9ea91fe1baf7c9786 194 Pfam PF01914 MarC family integral membrane protein 2 190 1.3E-57 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPO3950 c34ac3067e1732a9ea91fe1baf7c9786 194 PANTHER PTHR33508 1 192 7.0E-94 T 22-04-2016 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 498 521 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 461 483 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 323 343 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 250 265 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR00701 60kDa inner membrane protein signature 414 437 1.31E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 1.46E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 1.46E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 1.46E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PANTHER PTHR12428 165 546 8.2E-157 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 PANTHER PTHR12428:SF14 165 546 8.2E-157 T 22-04-2016 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 26.628 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 2.0E-120 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 Pfam PF14849 YidC periplasmic domain 61 342 2.3E-90 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 1.5E-69 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YPO4102 e19c7f67c88b4407a512b11b57f8c4b5 546 Pfam PF02096 60Kd inner membrane protein 353 532 1.7E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YPO2605 07406b49262ee00ba0b5bc71d1ac5ee7 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.47 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO2605 07406b49262ee00ba0b5bc71d1ac5ee7 156 PANTHER PTHR33603:SF1 1 155 1.4E-71 T 22-04-2016 YPO2605 07406b49262ee00ba0b5bc71d1ac5ee7 156 SUPERFAMILY SSF75217 2 154 2.62E-48 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPO2605 07406b49262ee00ba0b5bc71d1ac5ee7 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 3.3E-82 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO2605 07406b49262ee00ba0b5bc71d1ac5ee7 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 3.4E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO2605 07406b49262ee00ba0b5bc71d1ac5ee7 156 PIRSF PIRSF004505 1 155 4.6E-40 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO2605 07406b49262ee00ba0b5bc71d1ac5ee7 156 Gene3D G3DSA:3.40.1280.10 2 155 8.3E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO2605 07406b49262ee00ba0b5bc71d1ac5ee7 156 PANTHER PTHR33603 1 155 1.4E-71 T 22-04-2016 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 SUPERFAMILY SSF55874 329 478 4.71E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2916 40d8ef279e3878998890e7a2268d51b3 483 SUPERFAMILY SSF47384 240 321 4.51E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 PANTHER PTHR24423 197 483 4.3E-235 T 22-04-2016 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 Pfam PF00672 HAMP domain 184 251 3.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 PANTHER PTHR24423:SF473 197 483 4.3E-235 T 22-04-2016 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 PANTHER PTHR24423:SF473 2 19 4.3E-235 T 22-04-2016 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 479 1.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2916 40d8ef279e3878998890e7a2268d51b3 483 Gene3D G3DSA:1.10.287.130 249 321 1.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 PANTHER PTHR24423 2 19 4.3E-235 T 22-04-2016 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 Gene3D G3DSA:3.30.565.10 329 480 1.5E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2916 40d8ef279e3878998890e7a2268d51b3 483 SMART SM00388 257 325 2.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 6.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 6.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 6.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2916 40d8ef279e3878998890e7a2268d51b3 483 SMART SM00387 368 480 4.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2916 40d8ef279e3878998890e7a2268d51b3 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 321 3.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2176 a28376b238c84186360a863fc02a5b88 196 PANTHER PTHR11441 1 193 4.4E-85 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPO2176 a28376b238c84186360a863fc02a5b88 196 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPO2176 a28376b238c84186360a863fc02a5b88 196 Pfam PF00265 Thymidine kinase 2 186 6.3E-62 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPO2176 a28376b238c84186360a863fc02a5b88 196 SUPERFAMILY SSF57716 142 191 1.28E-17 T 22-04-2016 YPO2176 a28376b238c84186360a863fc02a5b88 196 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 36.002 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPO2176 a28376b238c84186360a863fc02a5b88 196 SUPERFAMILY SSF52540 1 141 5.03E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2176 a28376b238c84186360a863fc02a5b88 196 PIRSF PIRSF035805 1 194 1.8E-57 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YPO2176 a28376b238c84186360a863fc02a5b88 196 Gene3D G3DSA:3.30.60.20 142 191 7.9E-21 T 22-04-2016 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PANTHER PTHR30033 1 554 6.3E-132 T 22-04-2016 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 354 2.9E-72 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PANTHER PTHR30033:SF1 1 554 6.3E-132 T 22-04-2016 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 SUPERFAMILY SSF64518 100 551 4.84E-47 T 22-04-2016 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 Pfam PF00460 Flagella basal body rod protein 6 35 1.4E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 493 551 1.0E-5 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 519 543 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 447 466 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 472 493 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO1808 c7141f3595d76a469f142283c0bf1a6b 554 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 1.1E-83 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 Gene3D G3DSA:1.10.150.170 119 222 6.1E-37 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 PANTHER PTHR11265 9 320 8.6E-158 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 317 5.1E-126 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 14 318 38.391 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 PANTHER PTHR11265:SF0 9 320 8.6E-158 T 22-04-2016 YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 PIRSF PIRSF004486 8 319 1.5E-100 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 SUPERFAMILY SSF53335 220 318 1.14E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 SUPERFAMILY SSF53335 14 120 1.14E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 SUPERFAMILY SSF81799 121 220 2.49E-34 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 Gene3D G3DSA:3.40.50.150 223 318 2.3E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 Gene3D G3DSA:3.40.50.150 14 117 2.3E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0547 e3c80e7bfe426df4c6f63d87d75c58e1 320 Pfam PF01795 MraW methylase family 12 317 1.9E-116 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0512 360cd848fd1693e7b036b1d5a8362ea9 163 PANTHER PTHR37625 1 163 3.7E-80 T 22-04-2016 YPO0512 360cd848fd1693e7b036b1d5a8362ea9 163 PANTHER PTHR37625:SF2 1 163 3.7E-80 T 22-04-2016 YPO0512 360cd848fd1693e7b036b1d5a8362ea9 163 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 139 3.7E-11 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPO0512 360cd848fd1693e7b036b1d5a8362ea9 163 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 152 2.1E-19 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 Gene3D G3DSA:3.40.50.1100 81 333 2.7E-79 T 22-04-2016 YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 Gene3D G3DSA:3.40.1020.10 339 512 1.0E-56 T 22-04-2016 YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 SUPERFAMILY SSF53686 14 365 6.81E-101 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 316 1.2E-75 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 PANTHER PTHR10314 15 368 1.7E-196 T 22-04-2016 YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 6.1E-261 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 SUPERFAMILY SSF55021 336 423 9.16E-28 T 22-04-2016 YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 SUPERFAMILY SSF55021 420 512 1.03E-25 T 22-04-2016 YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 6.7E-26 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.9E-28 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 YPO3896 c4b98d901d0e264b88f4115c30857cc8 514 PANTHER PTHR10314:SF30 15 368 1.7E-196 T 22-04-2016 YPO3922 5f64aa8fdcd0a6e5504cc02a9e1c279e 205 Gene3D G3DSA:3.30.1500.10 1 182 1.8E-66 T 22-04-2016 IPR010495 Haem-binding HasA YPO3922 5f64aa8fdcd0a6e5504cc02a9e1c279e 205 Pfam PF06438 Heme-binding protein A (HasA) 1 205 2.4E-88 T 22-04-2016 IPR010495 Haem-binding HasA YPO3922 5f64aa8fdcd0a6e5504cc02a9e1c279e 205 SUPERFAMILY SSF54621 2 176 1.14E-67 T 22-04-2016 IPR010495 Haem-binding HasA YPO3922 5f64aa8fdcd0a6e5504cc02a9e1c279e 205 PIRSF PIRSF019876 1 205 1.9E-84 T 22-04-2016 IPR010495 Haem-binding HasA YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 9.6E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 9.6E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 236 253 9.6E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 153 175 9.6E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 267 286 9.6E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 98 120 9.6E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PANTHER PTHR34501:SF4 3 360 1.6E-269 T 22-04-2016 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 312 328 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 Gene3D G3DSA:2.40.160.10 23 360 2.8E-105 T 22-04-2016 IPR023614 Porin domain YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 98 108 2.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 230 242 2.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 312 329 2.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 2.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 2.3E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 Pfam PF00267 Gram-negative porin 28 360 4.3E-142 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 PANTHER PTHR34501 3 360 1.6E-269 T 22-04-2016 YPO1411 c9c404d3792643eb5cb637a13f0ec895 360 SUPERFAMILY SSF56935 23 360 1.41E-82 T 22-04-2016 YPO2241 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 PANTHER PTHR36118 1 209 4.7E-83 T 22-04-2016 YPO2241 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 1.3E-67 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YPO2241 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 PANTHER PTHR36118:SF1 1 209 4.7E-83 T 22-04-2016 YPO2241 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 PIRSF PIRSF006091 1 203 1.0E-71 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YPO2241 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 Pfam PF04205 FMN-binding domain 100 189 1.1E-17 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YPO2241 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 SMART SM00900 100 192 8.5E-35 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YPO2241 44c1b2f7be5aa9a34d928dd3a9d6c40e 209 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 26.87 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YPO3724 6a94a448ad899464e78aad4fa2cc583f 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.925 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YPO3724 6a94a448ad899464e78aad4fa2cc583f 575 PIRSF PIRSF000719 1 575 9.6E-305 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YPO3724 6a94a448ad899464e78aad4fa2cc583f 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 7 572 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YPO3724 6a94a448ad899464e78aad4fa2cc583f 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 3.1E-253 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YPO3724 6a94a448ad899464e78aad4fa2cc583f 575 PANTHER PTHR39559 1 575 3.8E-255 T 22-04-2016 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 Gene3D G3DSA:3.50.50.60 4 119 1.0E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.4E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PANTHER PTHR22912:SF48 1 314 2.2E-166 T 22-04-2016 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 Gene3D G3DSA:3.50.50.60 233 315 3.7E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 6.9E-41 T 22-04-2016 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 6.9E-41 T 22-04-2016 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.9E-41 T 22-04-2016 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.9E-41 T 22-04-2016 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.9E-41 T 22-04-2016 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 SUPERFAMILY SSF51905 1 314 3.8E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 Gene3D G3DSA:3.50.50.60 120 232 1.1E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.8E-125 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 YPO1374 397036a1e8a90c3a17e3300a3baaa2e4 320 PANTHER PTHR22912 1 314 2.2E-166 T 22-04-2016 YPO3035 85b5712bd4f4b6a1a43165f53390bba6 198 SUPERFAMILY SSF55811 10 188 4.6E-50 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO3035 85b5712bd4f4b6a1a43165f53390bba6 198 Pfam PF00293 NUDIX domain 45 169 1.7E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO3035 85b5712bd4f4b6a1a43165f53390bba6 198 Gene3D G3DSA:3.90.79.10 5 186 1.3E-58 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO3035 85b5712bd4f4b6a1a43165f53390bba6 198 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 185 5.0E-54 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 YPO3035 85b5712bd4f4b6a1a43165f53390bba6 198 PANTHER PTHR11839 4 190 8.5E-48 T 22-04-2016 YPO3049 bc310437331d90c5c4389afef6acb369 589 SUPERFAMILY SSF161098 300 586 6.35E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3049 bc310437331d90c5c4389afef6acb369 589 PANTHER PTHR30193:SF14 1 288 2.8E-186 T 22-04-2016 YPO3049 bc310437331d90c5c4389afef6acb369 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 276 3.0E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3049 bc310437331d90c5c4389afef6acb369 589 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 381 577 5.8E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3049 bc310437331d90c5c4389afef6acb369 589 SUPERFAMILY SSF161098 5 283 2.71E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3049 bc310437331d90c5c4389afef6acb369 589 PANTHER PTHR30193 1 288 2.8E-186 T 22-04-2016 YPO3049 bc310437331d90c5c4389afef6acb369 589 Gene3D G3DSA:1.10.3720.10 4 273 2.7E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3049 bc310437331d90c5c4389afef6acb369 589 Gene3D G3DSA:1.10.3720.10 299 575 2.8E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1734 53d0676c93c743ffef02e18ba0dedf10 283 SUPERFAMILY SSF56112 18 226 4.87E-21 T 22-04-2016 IPR011009 Protein kinase-like domain YPO1734 53d0676c93c743ffef02e18ba0dedf10 283 SMART SM00090 5 228 2.5E-15 T 22-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YPO1734 53d0676c93c743ffef02e18ba0dedf10 283 Gene3D G3DSA:3.30.200.20 17 125 4.5E-12 T 22-04-2016 YPO1734 53d0676c93c743ffef02e18ba0dedf10 283 Pfam PF01163 RIO1 family 31 219 9.4E-44 T 22-04-2016 YPO1734 53d0676c93c743ffef02e18ba0dedf10 283 PANTHER PTHR10593 6 277 2.7E-159 T 22-04-2016 YPO1734 53d0676c93c743ffef02e18ba0dedf10 283 Gene3D G3DSA:1.10.510.10 139 220 3.9E-18 T 22-04-2016 YPO1734 53d0676c93c743ffef02e18ba0dedf10 283 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 22-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YPO1734 53d0676c93c743ffef02e18ba0dedf10 283 PANTHER PTHR10593:SF19 6 277 2.7E-159 T 22-04-2016 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 PANTHER PTHR10353:SF35 1 478 3.7E-234 T 22-04-2016 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 6.1E-128 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 PANTHER PTHR10353 1 478 3.7E-234 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 Gene3D G3DSA:3.20.20.80 5 476 1.6E-148 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO1254 a74fc7c873f3ee79ed6daf78115e2870 478 SUPERFAMILY SSF51445 2 471 2.05E-160 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO1512 7ad277d3358ebe0867566999b11fba33 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 64 139 4.4E-12 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 YPO1512 7ad277d3358ebe0867566999b11fba33 294 SUPERFAMILY SSF53927 154 290 3.96E-40 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPO1512 7ad277d3358ebe0867566999b11fba33 294 Gene3D G3DSA:3.40.140.10 31 176 1.4E-45 T 22-04-2016 YPO1512 7ad277d3358ebe0867566999b11fba33 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YPO1512 7ad277d3358ebe0867566999b11fba33 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 285 2.8E-88 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YPO1512 7ad277d3358ebe0867566999b11fba33 294 PANTHER PTHR11644:SF15 18 294 3.1E-170 T 22-04-2016 YPO1512 7ad277d3358ebe0867566999b11fba33 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 5.8E-47 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YPO1512 7ad277d3358ebe0867566999b11fba33 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 51.055 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YPO1512 7ad277d3358ebe0867566999b11fba33 294 Gene3D G3DSA:3.40.140.10 185 291 1.3E-24 T 22-04-2016 YPO1512 7ad277d3358ebe0867566999b11fba33 294 SUPERFAMILY SSF53927 1 149 1.07E-42 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPO1512 7ad277d3358ebe0867566999b11fba33 294 PIRSF PIRSF006334 14 294 1.5E-112 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YPO1512 7ad277d3358ebe0867566999b11fba33 294 PANTHER PTHR11644 18 294 3.1E-170 T 22-04-2016 YPO2766 ea92176fe725f99da662afeba2353704 264 SUPERFAMILY SSF55120 2 257 9.64E-91 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2766 ea92176fe725f99da662afeba2353704 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.516 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2766 ea92176fe725f99da662afeba2353704 264 Gene3D G3DSA:3.30.70.580 2 104 2.6E-37 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2766 ea92176fe725f99da662afeba2353704 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.5E-75 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2766 ea92176fe725f99da662afeba2353704 264 PANTHER PTHR11142 1 259 3.5E-101 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2766 ea92176fe725f99da662afeba2353704 264 Gene3D G3DSA:3.30.70.660 106 241 1.2E-45 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2766 ea92176fe725f99da662afeba2353704 264 Pfam PF01416 tRNA pseudouridine synthase 8 103 8.4E-11 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2766 ea92176fe725f99da662afeba2353704 264 Pfam PF01416 tRNA pseudouridine synthase 142 244 1.3E-28 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2766 ea92176fe725f99da662afeba2353704 264 PIRSF PIRSF001430 1 252 2.9E-77 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2846 cca1cea5c0437ac36a079113bbe60368 361 SUPERFAMILY SSF50331 238 355 3.29E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO2846 cca1cea5c0437ac36a079113bbe60368 361 PANTHER PTHR24220 300 354 2.3E-196 T 22-04-2016 YPO2846 cca1cea5c0437ac36a079113bbe60368 361 PANTHER PTHR24220 6 283 2.3E-196 T 22-04-2016 YPO2846 cca1cea5c0437ac36a079113bbe60368 361 Pfam PF00005 ABC transporter 21 163 8.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2846 cca1cea5c0437ac36a079113bbe60368 361 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2846 cca1cea5c0437ac36a079113bbe60368 361 Gene3D G3DSA:3.40.50.300 3 237 3.7E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2846 cca1cea5c0437ac36a079113bbe60368 361 PANTHER PTHR24220:SF402 300 354 2.3E-196 T 22-04-2016 YPO2846 cca1cea5c0437ac36a079113bbe60368 361 PANTHER PTHR24220:SF402 6 283 2.3E-196 T 22-04-2016 YPO2846 cca1cea5c0437ac36a079113bbe60368 361 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 353 1.6E-110 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 YPO2846 cca1cea5c0437ac36a079113bbe60368 361 SMART SM00382 30 212 1.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2846 cca1cea5c0437ac36a079113bbe60368 361 SUPERFAMILY SSF52540 5 242 2.59E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2846 cca1cea5c0437ac36a079113bbe60368 361 Pfam PF08402 TOBE domain 280 356 2.6E-16 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPO2068 7023f76dbd0a5c3aa953e0a56b05bae6 154 PANTHER PTHR30561:SF2 8 118 1.0E-77 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 YPO2068 7023f76dbd0a5c3aa953e0a56b05bae6 154 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 8 154 32.525 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 YPO2068 7023f76dbd0a5c3aa953e0a56b05bae6 154 SUPERFAMILY SSF103481 13 114 1.44E-16 T 22-04-2016 YPO2068 7023f76dbd0a5c3aa953e0a56b05bae6 154 Pfam PF00893 Small Multidrug Resistance protein 10 100 1.5E-22 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YPO2068 7023f76dbd0a5c3aa953e0a56b05bae6 154 PANTHER PTHR30561 8 118 1.0E-77 T 22-04-2016 YPO3376 0223a33ec98493f3832d19d37e449051 431 SUPERFAMILY SSF51604 143 427 1.84E-127 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO3376 0223a33ec98493f3832d19d37e449051 431 PANTHER PTHR11902 1 427 1.3E-274 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 Gene3D G3DSA:3.30.390.10 3 126 1.2E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPO3376 0223a33ec98493f3832d19d37e449051 431 Gene3D G3DSA:3.20.20.120 128 428 1.2E-135 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO3376 0223a33ec98493f3832d19d37e449051 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 PIRSF PIRSF001400 1 429 1.0E-191 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 Pfam PF03952 Enolase, N-terminal domain 4 134 2.0E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 SUPERFAMILY SSF54826 3 138 3.16E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPO3376 0223a33ec98493f3832d19d37e449051 431 Hamap MF_00318 Enolase [eno]. 2 416 44.117 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 3.1E-205 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 SMART SM01193 4 134 5.3E-93 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 SMART SM01192 143 430 1.2E-212 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO3376 0223a33ec98493f3832d19d37e449051 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 1.1E-139 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YPO1859 50c69805a86ea0ce805028c06e15ba75 474 PIRSF PIRSF006060 4 472 1.8E-68 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1859 50c69805a86ea0ce805028c06e15ba75 474 PANTHER PTHR11785 3 469 1.7E-218 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1859 50c69805a86ea0ce805028c06e15ba75 474 Pfam PF00324 Amino acid permease 30 467 9.1E-114 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPO1859 50c69805a86ea0ce805028c06e15ba75 474 ProSitePatterns PS00218 Amino acid permeases signature. 55 85 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPO1859 50c69805a86ea0ce805028c06e15ba75 474 PANTHER PTHR11785:SF336 3 469 1.7E-218 T 22-04-2016 YPO3784 d2e796ea028d155f0b0877db6d40556b 605 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 419 540 1.6E-27 T 22-04-2016 IPR025299 CstA, C-terminal domain YPO3784 d2e796ea028d155f0b0877db6d40556b 605 PANTHER PTHR30252 5 550 5.3E-226 T 22-04-2016 YPO3784 d2e796ea028d155f0b0877db6d40556b 605 Pfam PF02554 Carbon starvation protein CstA 6 369 4.6E-138 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 YPO3784 d2e796ea028d155f0b0877db6d40556b 605 PANTHER PTHR30252:SF3 5 550 5.3E-226 T 22-04-2016 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 SMART SM00881 4 100 6.1E-39 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 5.4E-146 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 Gene3D G3DSA:3.40.50.720 2 118 3.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1116 9a12b959891f482fcbbd1ad202f37751 290 PANTHER PTHR11117 1 288 1.8E-198 T 22-04-2016 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 Gene3D G3DSA:3.40.50.261 119 287 8.5E-77 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 SUPERFAMILY SSF51735 1 122 3.38E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1116 9a12b959891f482fcbbd1ad202f37751 290 Pfam PF02629 CoA binding domain 6 99 1.7E-32 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 Pfam PF00549 CoA-ligase 151 271 9.2E-21 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 SUPERFAMILY SSF52210 123 287 4.97E-56 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 PIRSF PIRSF001553 1 290 3.9E-134 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YPO1116 9a12b959891f482fcbbd1ad202f37751 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YPO0853 10991cb2299d93454a516d4d71ccb570 400 Gene3D G3DSA:3.20.20.80 27 399 1.9E-147 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO0853 10991cb2299d93454a516d4d71ccb570 400 Pfam PF07745 Glycosyl hydrolase family 53 40 399 9.1E-123 T 22-04-2016 IPR011683 Glycosyl hydrolase family 53 GO:0015926 YPO0853 10991cb2299d93454a516d4d71ccb570 400 PANTHER PTHR34983:SF1 1 400 2.8E-219 T 22-04-2016 YPO0853 10991cb2299d93454a516d4d71ccb570 400 SUPERFAMILY SSF51445 14 399 4.15E-98 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO0853 10991cb2299d93454a516d4d71ccb570 400 PANTHER PTHR34983 1 400 2.8E-219 T 22-04-2016 YPO0281 578c28c49bfbe5f51698b7dc481ba795 279 Gene3D G3DSA:3.40.50.1980 147 275 4.0E-18 T 22-04-2016 YPO0281 578c28c49bfbe5f51698b7dc481ba795 279 PANTHER PTHR30535 26 275 2.0E-104 T 22-04-2016 YPO0281 578c28c49bfbe5f51698b7dc481ba795 279 SUPERFAMILY SSF53807 26 274 3.1E-49 T 22-04-2016 YPO0281 578c28c49bfbe5f51698b7dc481ba795 279 Pfam PF01497 Periplasmic binding protein 29 253 1.2E-31 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPO0281 578c28c49bfbe5f51698b7dc481ba795 279 PANTHER PTHR30535:SF4 26 275 2.0E-104 T 22-04-2016 YPO0281 578c28c49bfbe5f51698b7dc481ba795 279 Gene3D G3DSA:3.40.50.1980 26 146 5.0E-25 T 22-04-2016 YPO3529 b077dd46a2ef9096a2c759a68c902cb0 247 SUPERFAMILY SSF56655 2 243 3.66E-73 T 22-04-2016 YPO3529 b077dd46a2ef9096a2c759a68c902cb0 247 Pfam PF00459 Inositol monophosphatase family 8 232 5.1E-48 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO3529 b077dd46a2ef9096a2c759a68c902cb0 247 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site YPO3529 b077dd46a2ef9096a2c759a68c902cb0 247 Gene3D G3DSA:3.30.540.10 2 148 1.4E-43 T 22-04-2016 YPO3529 b077dd46a2ef9096a2c759a68c902cb0 247 PANTHER PTHR20854 2 244 1.1E-85 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO3529 b077dd46a2ef9096a2c759a68c902cb0 247 PANTHER PTHR20854:SF5 2 244 1.1E-85 T 22-04-2016 YPO3529 b077dd46a2ef9096a2c759a68c902cb0 247 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 2 245 1.2E-102 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 YPO3529 b077dd46a2ef9096a2c759a68c902cb0 247 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 205 219 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 YPO3529 b077dd46a2ef9096a2c759a68c902cb0 247 Gene3D G3DSA:3.40.190.80 149 244 1.0E-40 T 22-04-2016 YPO1106 91f022edd84d0514bd1168083523fcc9 293 Hamap MF_00361 NAD kinase [nadK]. 7 288 33.677 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPO1106 91f022edd84d0514bd1168083523fcc9 293 SUPERFAMILY SSF111331 9 290 1.7E-93 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain YPO1106 91f022edd84d0514bd1168083523fcc9 293 Gene3D G3DSA:2.60.200.30 150 262 5.6E-43 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPO1106 91f022edd84d0514bd1168083523fcc9 293 Gene3D G3DSA:3.40.50.10330 4 149 1.3E-38 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPO1106 91f022edd84d0514bd1168083523fcc9 293 Pfam PF01513 ATP-NAD kinase 9 272 6.6E-76 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPO1106 91f022edd84d0514bd1168083523fcc9 293 PANTHER PTHR20275 3 292 6.6E-113 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 2.3E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.0E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 Pfam PF04055 Radical SAM superfamily 50 202 5.9E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 PIRSF PIRSF001619 1 319 8.0E-139 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 SUPERFAMILY SSF102114 5 313 2.62E-95 T 22-04-2016 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 SMART SM00729 43 255 1.7E-41 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 Gene3D G3DSA:3.20.20.70 5 314 9.2E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 PANTHER PTHR22976 7 345 3.2E-199 T 22-04-2016 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 PANTHER PTHR22976:SF1 7 345 3.2E-199 T 22-04-2016 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 SMART SM00876 220 312 1.5E-48 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO1151 556276d9b1ccec551de2f97ca40c005d 345 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.761 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO0005 fe182abd77e010c501be278b1c821343 517 PANTHER PTHR32204 1 511 6.5E-152 T 22-04-2016 YPO0005 fe182abd77e010c501be278b1c821343 517 Hamap MF_01625 ATPase RavA [ravA]. 1 507 59.847 T 22-04-2016 IPR023671 ATPase RavA GO:0005737|GO:0016887 YPO0005 fe182abd77e010c501be278b1c821343 517 Pfam PF12592 Protein of unknown function (DUF3763) 444 496 1.6E-19 T 22-04-2016 IPR022547 ATPase, RavA, C-terminal GO:0016820 YPO0005 fe182abd77e010c501be278b1c821343 517 SUPERFAMILY SSF52540 21 287 8.89E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0005 fe182abd77e010c501be278b1c821343 517 Gene3D G3DSA:3.40.50.300 25 184 7.4E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0005 fe182abd77e010c501be278b1c821343 517 SMART SM00382 38 187 3.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0005 fe182abd77e010c501be278b1c821343 517 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 7.5E-24 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 SUPERFAMILY SSF53187 292 373 2.16E-64 T 22-04-2016 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 SUPERFAMILY SSF53187 5 178 2.16E-64 T 22-04-2016 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 Gene3D G3DSA:3.40.630.10 5 187 2.6E-73 T 22-04-2016 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 Gene3D G3DSA:3.40.630.10 316 374 2.6E-73 T 22-04-2016 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.284 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 Gene3D G3DSA:3.30.70.360 188 288 4.0E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 PANTHER PTHR11014 4 374 5.6E-99 T 22-04-2016 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 Pfam PF07687 Peptidase dimerisation domain 175 282 2.0E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 7.2E-44 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 SUPERFAMILY SSF55031 179 286 3.44E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 1.3E-176 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 YPO3053 f766d7fe3fb9ab487da6cbea82d3a892 375 PANTHER PTHR11014:SF106 4 374 5.6E-99 T 22-04-2016 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 423 1.5E-198 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 Gene3D G3DSA:1.10.400.20 294 409 1.7E-52 T 22-04-2016 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 PIRSF PIRSF009264 1 429 2.7E-211 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 Gene3D G3DSA:3.20.20.70 5 293 1.6E-140 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 SUPERFAMILY SSF51569 4 425 2.75E-173 T 22-04-2016 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 1.0E-200 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 PANTHER PTHR32502 226 424 9.6E-192 T 22-04-2016 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 PANTHER PTHR32502 12 182 9.6E-192 T 22-04-2016 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 PANTHER PTHR32502:SF2 226 424 9.6E-192 T 22-04-2016 YPO0832 3e7f31472f57070e3dd198f962b6e71f 432 PANTHER PTHR32502:SF2 12 182 9.6E-192 T 22-04-2016 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 SUPERFAMILY SSF50621 251 419 4.6E-56 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 37.784 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 8.53E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 2.84E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 2.84E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 2.84E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 2.84E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PANTHER PTHR11482 16 419 2.7E-147 T 22-04-2016 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 Gene3D G3DSA:3.20.20.10 48 263 6.2E-62 T 22-04-2016 IPR029066 PLP-binding barrel YPO0796 b56db39ee6b4eb35d199d62696536f22 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 11 418 1.7E-126 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 395 1.2E-15 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 SUPERFAMILY SSF51419 25 277 6.94E-57 T 22-04-2016 IPR029066 PLP-binding barrel YPO0796 b56db39ee6b4eb35d199d62696536f22 420 Gene3D G3DSA:2.40.37.10 264 419 8.4E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 275 1.4E-56 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 YPO0796 b56db39ee6b4eb35d199d62696536f22 420 PANTHER PTHR11482:SF5 16 419 2.7E-147 T 22-04-2016 YPO4019 91a2b4db175d6348f29b431b93a671d8 188 Gene3D G3DSA:3.40.50.2020 3 182 2.5E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO4019 91a2b4db175d6348f29b431b93a671d8 188 SUPERFAMILY SSF53271 34 176 2.62E-24 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO4019 91a2b4db175d6348f29b431b93a671d8 188 PANTHER PTHR19278:SF32 28 177 9.1E-34 T 22-04-2016 YPO4019 91a2b4db175d6348f29b431b93a671d8 188 PANTHER PTHR19278 28 177 9.1E-34 T 22-04-2016 YPO4019 91a2b4db175d6348f29b431b93a671d8 188 Pfam PF00156 Phosphoribosyl transferase domain 35 152 5.3E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 PANTHER PTHR11728 1 339 2.5E-151 T 22-04-2016 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.166 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 SUPERFAMILY SSF51735 8 182 3.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0068 8038d88a40870595258e6de0f9e84ed5 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 Gene3D G3DSA:1.10.1040.10 184 330 1.4E-58 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 2.2E-52 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 Gene3D G3DSA:3.40.50.720 24 182 1.2E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0068 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 8.8E-41 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 Gene3D G3DSA:3.50.50.60 4 23 9.6E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 PIRSF PIRSF000114 1 336 2.3E-100 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 SUPERFAMILY SSF48179 184 335 2.44E-58 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO0068 8038d88a40870595258e6de0f9e84ed5 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 162 7.5E-52 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YPO2959 eb782ee32169105a48191b16075e5239 528 SUPERFAMILY SSF161098 28 254 7.3E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2959 eb782ee32169105a48191b16075e5239 528 SUPERFAMILY SSF161098 286 519 2.43E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2959 eb782ee32169105a48191b16075e5239 528 PANTHER PTHR30193:SF3 1 270 9.1E-96 T 22-04-2016 YPO2959 eb782ee32169105a48191b16075e5239 528 Gene3D G3DSA:1.10.3720.10 31 254 5.8E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2959 eb782ee32169105a48191b16075e5239 528 Gene3D G3DSA:1.10.3720.10 316 524 4.3E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2959 eb782ee32169105a48191b16075e5239 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 254 5.2E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2959 eb782ee32169105a48191b16075e5239 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 345 524 1.4E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2959 eb782ee32169105a48191b16075e5239 528 PANTHER PTHR30193 1 270 9.1E-96 T 22-04-2016 YPO0655 b59d4a901e6322f43b5056d27fb2dbf7 416 Pfam PF13520 Amino acid permease 8 412 5.1E-31 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO0655 b59d4a901e6322f43b5056d27fb2dbf7 416 PIRSF PIRSF006060 1 414 2.8E-50 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO0655 b59d4a901e6322f43b5056d27fb2dbf7 416 PANTHER PTHR11785:SF415 3 416 3.9E-161 T 22-04-2016 YPO0655 b59d4a901e6322f43b5056d27fb2dbf7 416 PANTHER PTHR11785 3 416 3.9E-161 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1635 334f3fc560f7e9a489fce60ff7dcf519 207 Pfam PF13505 Outer membrane protein beta-barrel domain 8 207 1.1E-10 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPO1635 334f3fc560f7e9a489fce60ff7dcf519 207 Gene3D G3DSA:2.40.160.20 9 207 5.2E-7 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO1635 334f3fc560f7e9a489fce60ff7dcf519 207 SUPERFAMILY SSF56925 19 167 1.07E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO3453 5ccfd18dd2858fdea79b2a21dd36375f 233 PANTHER PTHR24220:SF81 1 225 4.5E-101 T 22-04-2016 YPO3453 5ccfd18dd2858fdea79b2a21dd36375f 233 SUPERFAMILY SSF52540 1 227 2.87E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3453 5ccfd18dd2858fdea79b2a21dd36375f 233 PANTHER PTHR24220 1 225 4.5E-101 T 22-04-2016 YPO3453 5ccfd18dd2858fdea79b2a21dd36375f 233 Gene3D G3DSA:3.40.50.300 1 228 2.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3453 5ccfd18dd2858fdea79b2a21dd36375f 233 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3453 5ccfd18dd2858fdea79b2a21dd36375f 233 Pfam PF00005 ABC transporter 19 166 3.8E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3453 5ccfd18dd2858fdea79b2a21dd36375f 233 SMART SM00382 27 215 2.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2337 6785b98691b437755f79ebb5125687ee 279 Gene3D G3DSA:1.10.1660.10 1 104 5.4E-18 T 22-04-2016 YPO2337 6785b98691b437755f79ebb5125687ee 279 PANTHER PTHR30204:SF5 1 279 6.5E-157 T 22-04-2016 YPO2337 6785b98691b437755f79ebb5125687ee 279 Gene3D G3DSA:3.20.80.10 154 256 5.7E-9 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPO2337 6785b98691b437755f79ebb5125687ee 279 SMART SM00422 2 70 1.6E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO2337 6785b98691b437755f79ebb5125687ee 279 Pfam PF13411 MerR HTH family regulatory protein 2 67 3.8E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO2337 6785b98691b437755f79ebb5125687ee 279 PANTHER PTHR30204 1 279 6.5E-157 T 22-04-2016 YPO2337 6785b98691b437755f79ebb5125687ee 279 SUPERFAMILY SSF46955 1 103 1.88E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain YPO1023 da8f0f245af3dfdfca3323268f648fba 416 PANTHER PTHR30404 13 409 2.2E-139 T 22-04-2016 YPO1023 da8f0f245af3dfdfca3323268f648fba 416 Gene3D G3DSA:3.40.630.40 332 407 1.5E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPO1023 da8f0f245af3dfdfca3323268f648fba 416 Gene3D G3DSA:3.40.630.40 188 285 1.5E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPO1023 da8f0f245af3dfdfca3323268f648fba 416 Pfam PF11741 AMIN domain 39 142 2.1E-27 T 22-04-2016 IPR021731 AMIN domain YPO1023 da8f0f245af3dfdfca3323268f648fba 416 SMART SM00646 250 404 8.0E-65 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPO1023 da8f0f245af3dfdfca3323268f648fba 416 PANTHER PTHR30404:SF0 13 409 2.2E-139 T 22-04-2016 YPO1023 da8f0f245af3dfdfca3323268f648fba 416 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 1.2E-52 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPO1023 da8f0f245af3dfdfca3323268f648fba 416 SUPERFAMILY SSF53187 188 284 8.79E-55 T 22-04-2016 YPO1023 da8f0f245af3dfdfca3323268f648fba 416 SUPERFAMILY SSF53187 331 407 8.79E-55 T 22-04-2016 YPO2527 0541ee1b2483b7d193f7433250406e75 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 169 2.2E-27 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPO2527 0541ee1b2483b7d193f7433250406e75 567 SUPERFAMILY SSF52518 372 559 2.57E-33 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2527 0541ee1b2483b7d193f7433250406e75 567 PANTHER PTHR18968 1 559 7.3E-238 T 22-04-2016 YPO2527 0541ee1b2483b7d193f7433250406e75 567 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 559 32.556 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO2527 0541ee1b2483b7d193f7433250406e75 567 PANTHER PTHR18968:SF114 1 559 7.3E-238 T 22-04-2016 YPO2527 0541ee1b2483b7d193f7433250406e75 567 Gene3D G3DSA:3.40.50.970 348 554 5.7E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2527 0541ee1b2483b7d193f7433250406e75 567 PIRSF PIRSF004983 1 564 5.0E-178 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO2527 0541ee1b2483b7d193f7433250406e75 567 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 436 1.5E-142 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO2527 0541ee1b2483b7d193f7433250406e75 567 Gene3D G3DSA:3.40.50.970 7 180 9.3E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2527 0541ee1b2483b7d193f7433250406e75 567 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 394 6.5E-88 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO2527 0541ee1b2483b7d193f7433250406e75 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 541 3.0E-7 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPO2527 0541ee1b2483b7d193f7433250406e75 567 SUPERFAMILY SSF52518 7 176 5.35E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO1916 e9afc6528489177f5b1296eeded8dfe9 434 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 15 434 5.6E-206 T 22-04-2016 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00011 YPO1916 e9afc6528489177f5b1296eeded8dfe9 434 SUPERFAMILY SSF56322 10 432 5.1E-96 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO1916 e9afc6528489177f5b1296eeded8dfe9 434 PANTHER PTHR11236 20 434 1.9E-275 T 22-04-2016 YPO1916 e9afc6528489177f5b1296eeded8dfe9 434 Pfam PF00425 chorismate binding enzyme 173 424 7.0E-70 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPO1916 e9afc6528489177f5b1296eeded8dfe9 434 Gene3D G3DSA:3.60.120.10 48 432 3.6E-85 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO1916 e9afc6528489177f5b1296eeded8dfe9 434 PANTHER PTHR11236:SF17 20 434 1.9E-275 T 22-04-2016 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 PIRSF PIRSF000774 1 477 5.7E-147 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 5.3E-60 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 392 403 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 450 468 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 376 388 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 PRINTS PR00045 Sigma-54 factor signature 186 203 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 474 2.7E-156 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 PANTHER PTHR32248:SF4 1 477 1.3E-190 T 22-04-2016 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 3.3E-69 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 2.5E-15 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 PANTHER PTHR32248 1 477 1.3E-190 T 22-04-2016 YPO3582 6d0a8219a363c0ca206e9aa9ca717a4c 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YPO0721 b0585634394694468f86f8db43e95ab3 305 PANTHER PTHR36307 95 305 5.8E-54 T 22-04-2016 YPO0721 b0585634394694468f86f8db43e95ab3 305 Pfam PF13144 Chaperone for flagella basal body P-ring formation 97 299 5.2E-55 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPO0721 b0585634394694468f86f8db43e95ab3 305 SMART SM00858 176 238 1.3E-9 T 22-04-2016 IPR013974 SAF domain YPO0721 b0585634394694468f86f8db43e95ab3 305 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 164 299 1.2E-39 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 SUPERFAMILY SSF52540 237 359 9.27E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 SUPERFAMILY SSF52540 50 169 9.27E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 SUPERFAMILY SSF57829 424 466 3.3E-7 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 SMART SM00487 1 185 1.4E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 Gene3D G3DSA:3.40.50.300 238 354 4.8E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 Pfam PF00271 Helicase conserved C-terminal domain 242 343 7.9E-12 T 22-04-2016 IPR001650 Helicase, C-terminal YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 4.9E-24 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 Gene3D G3DSA:3.40.50.300 3 155 1.0E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 SMART SM00490 263 345 2.0E-9 T 22-04-2016 IPR001650 Helicase, C-terminal YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 PANTHER PTHR24031:SF319 233 367 9.1E-225 T 22-04-2016 YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 PANTHER PTHR24031:SF319 1 153 9.1E-225 T 22-04-2016 YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 PANTHER PTHR24031:SF319 443 584 9.1E-225 T 22-04-2016 YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 PANTHER PTHR24031:SF319 172 208 9.1E-225 T 22-04-2016 YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 PANTHER PTHR24031 233 367 9.1E-225 T 22-04-2016 YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 PANTHER PTHR24031 1 153 9.1E-225 T 22-04-2016 YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 PANTHER PTHR24031 443 584 9.1E-225 T 22-04-2016 YPO1265 5cab8f89754fab6cfe4cb8fbd83502f2 585 PANTHER PTHR24031 172 208 9.1E-225 T 22-04-2016 YPO2544 70e86819fcfe057ec7c5ec11e52aa48c 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPO2544 70e86819fcfe057ec7c5ec11e52aa48c 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPO2544 70e86819fcfe057ec7c5ec11e52aa48c 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPO2544 70e86819fcfe057ec7c5ec11e52aa48c 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPO2544 70e86819fcfe057ec7c5ec11e52aa48c 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 9.4E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YPO2544 70e86819fcfe057ec7c5ec11e52aa48c 510 Pfam PF00361 Proton-conducting membrane transporter 134 431 1.7E-70 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YPO2544 70e86819fcfe057ec7c5ec11e52aa48c 510 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 496 9.8E-182 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 YPO2544 70e86819fcfe057ec7c5ec11e52aa48c 510 PANTHER PTHR22773 1 502 4.6E-197 T 22-04-2016 YPO2544 70e86819fcfe057ec7c5ec11e52aa48c 510 PANTHER PTHR22773:SF40 1 502 4.6E-197 T 22-04-2016 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:3.40.1380.20 327 468 7.9E-43 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF51621 1 74 3.0E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF51621 156 338 3.0E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.7E-27 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.5E-185 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 PANTHER PTHR11817 1 464 2.9E-255 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 7.2E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:3.20.20.60 169 326 3.6E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:3.20.20.60 2 72 3.6E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 2.8E-152 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF52935 323 469 9.68E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2393 132dbb1082d8bf76375d258694d78fa7 470 SUPERFAMILY SSF50800 70 167 3.14E-29 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YPO2393 132dbb1082d8bf76375d258694d78fa7 470 Gene3D G3DSA:2.40.33.10 73 168 3.3E-32 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO3139 a17bbf5f4af18ee5e3aea8c688b10060 181 Gene3D G3DSA:1.10.10.10 82 165 4.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3139 a17bbf5f4af18ee5e3aea8c688b10060 181 PANTHER PTHR10815 23 179 7.1E-73 T 22-04-2016 YPO3139 a17bbf5f4af18ee5e3aea8c688b10060 181 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 83 146 3.8E-15 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPO3139 a17bbf5f4af18ee5e3aea8c688b10060 181 PANTHER PTHR10815:SF2 23 179 7.1E-73 T 22-04-2016 YPO3139 a17bbf5f4af18ee5e3aea8c688b10060 181 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 84 163 5.4E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPO3139 a17bbf5f4af18ee5e3aea8c688b10060 181 SUPERFAMILY SSF46767 82 164 4.84E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 Gene3D G3DSA:3.40.250.10 457 545 3.6E-23 T 22-04-2016 IPR001763 Rhodanese-like domain YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 434 3.5E-12 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 2.0E-17 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 404 2.0E-17 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 2.0E-17 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.0E-17 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 2.0E-17 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 SUPERFAMILY SSF51905 2 319 1.2E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 Gene3D G3DSA:3.50.50.60 3 114 6.0E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 Pfam PF00581 Rhodanese-like domain 460 543 1.5E-12 T 22-04-2016 IPR001763 Rhodanese-like domain YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PANTHER PTHR22912:SF140 1 443 6.2E-199 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 SMART SM00450 453 548 8.8E-17 T 22-04-2016 IPR001763 Rhodanese-like domain YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 SUPERFAMILY SSF55424 325 447 1.36E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 309 1.6E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PANTHER PTHR22912 1 443 6.2E-199 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.0E-23 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.0E-23 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.0E-23 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.0E-23 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.0E-23 T 22-04-2016 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 SUPERFAMILY SSF52821 432 543 3.4E-26 T 22-04-2016 IPR001763 Rhodanese-like domain YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 Gene3D G3DSA:3.30.390.30 338 448 6.0E-41 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO3001 484b9a6f7dc7e23f17a909b45793fd51 548 Gene3D G3DSA:3.50.50.60 115 318 2.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0243 d4cf90fd31b813b10be26cf62e8f9fb6 373 Pfam PF02481 DNA recombination-mediator protein A 68 274 6.1E-76 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 YPO0243 d4cf90fd31b813b10be26cf62e8f9fb6 373 PANTHER PTHR32039 21 373 5.6E-142 T 22-04-2016 YPO0243 d4cf90fd31b813b10be26cf62e8f9fb6 373 Gene3D G3DSA:3.40.50.450 108 252 1.5E-11 T 22-04-2016 YPO0243 d4cf90fd31b813b10be26cf62e8f9fb6 373 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 64 282 1.3E-82 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 YPO0243 d4cf90fd31b813b10be26cf62e8f9fb6 373 SUPERFAMILY SSF102405 76 281 2.14E-41 T 22-04-2016 YPO0243 d4cf90fd31b813b10be26cf62e8f9fb6 373 PANTHER PTHR32039:SF8 21 373 5.6E-142 T 22-04-2016 YPO0278 3f67f7a79117e38d1d31d05ff6d70eca 393 Gene3D G3DSA:3.90.1150.10 257 387 3.1E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO0278 3f67f7a79117e38d1d31d05ff6d70eca 393 Gene3D G3DSA:3.40.640.10 11 256 1.6E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0278 3f67f7a79117e38d1d31d05ff6d70eca 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPO0278 3f67f7a79117e38d1d31d05ff6d70eca 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 386 5.6E-94 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPO0278 3f67f7a79117e38d1d31d05ff6d70eca 393 PANTHER PTHR11808:SF40 11 391 2.1E-211 T 22-04-2016 YPO0278 3f67f7a79117e38d1d31d05ff6d70eca 393 PANTHER PTHR11808 11 391 2.1E-211 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPO0278 3f67f7a79117e38d1d31d05ff6d70eca 393 SUPERFAMILY SSF53383 45 386 4.34E-82 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO0278 3f67f7a79117e38d1d31d05ff6d70eca 393 PIRSF PIRSF001434 1 390 2.4E-106 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YPO0278 3f67f7a79117e38d1d31d05ff6d70eca 393 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 13 388 2.4E-134 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 YPO3130 2fdd02605cb6e751036b20f33eff01fb 117 SUPERFAMILY SSF75169 1 117 7.07E-33 T 22-04-2016 IPR027396 DsrEFH-like YPO3130 2fdd02605cb6e751036b20f33eff01fb 117 Pfam PF02635 DsrE/DsrF-like family 3 117 6.7E-21 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein YPO3130 2fdd02605cb6e751036b20f33eff01fb 117 Gene3D G3DSA:3.40.1260.10 1 117 4.3E-41 T 22-04-2016 IPR027396 DsrEFH-like YPO3130 2fdd02605cb6e751036b20f33eff01fb 117 PANTHER PTHR34874 2 117 5.9E-80 T 22-04-2016 YPO3130 2fdd02605cb6e751036b20f33eff01fb 117 PANTHER PTHR34874:SF2 2 117 5.9E-80 T 22-04-2016 YPO0159 b7aef51668276be5b57b6362177e07fc 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YPO0159 b7aef51668276be5b57b6362177e07fc 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YPO0159 b7aef51668276be5b57b6362177e07fc 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 250 6.9E-80 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YPO0159 b7aef51668276be5b57b6362177e07fc 268 Pfam PF01226 Formate/nitrite transporter 18 247 1.4E-56 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YPO0159 b7aef51668276be5b57b6362177e07fc 268 PANTHER PTHR30520 1 267 9.7E-133 T 22-04-2016 YPO0159 b7aef51668276be5b57b6362177e07fc 268 Gene3D G3DSA:1.20.1080.10 23 249 7.3E-61 T 22-04-2016 IPR023271 Aquaporin-like YPO0159 b7aef51668276be5b57b6362177e07fc 268 PANTHER PTHR30520:SF5 1 267 9.7E-133 T 22-04-2016 YPO2600 565559992bb320543a67f2f490ad5769 87 Gene3D G3DSA:3.30.70.1460 1 87 1.8E-37 T 22-04-2016 IPR027471 YbeD-like domain YPO2600 565559992bb320543a67f2f490ad5769 87 PANTHER PTHR38036:SF1 1 87 3.1E-43 T 22-04-2016 YPO2600 565559992bb320543a67f2f490ad5769 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.956 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 YPO2600 565559992bb320543a67f2f490ad5769 87 SUPERFAMILY SSF117991 1 87 3.92E-32 T 22-04-2016 IPR027471 YbeD-like domain YPO2600 565559992bb320543a67f2f490ad5769 87 PANTHER PTHR38036 1 87 3.1E-43 T 22-04-2016 YPO2600 565559992bb320543a67f2f490ad5769 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 7.9E-31 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 YPO2047 a3a02630da9bb987339ce9861dfaac31 191 PANTHER PTHR37519 2 190 5.3E-120 T 22-04-2016 YPO2047 a3a02630da9bb987339ce9861dfaac31 191 PANTHER PTHR37519:SF1 2 190 5.3E-120 T 22-04-2016 YPO2047 a3a02630da9bb987339ce9861dfaac31 191 Gene3D G3DSA:3.10.180.10 4 180 3.7E-72 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO2047 a3a02630da9bb987339ce9861dfaac31 191 Pfam PF06185 YecM protein 10 180 9.2E-70 T 22-04-2016 IPR010393 Protein of unknown function DUF991 YPO2047 a3a02630da9bb987339ce9861dfaac31 191 SUPERFAMILY SSF54593 4 180 2.02E-69 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO3527 6f93087d885c75848feda0e9636a1f3f 70 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 6.0E-32 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 YPO3527 6f93087d885c75848feda0e9636a1f3f 70 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 2.7E-29 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 YPO3527 6f93087d885c75848feda0e9636a1f3f 70 Gene3D G3DSA:3.30.1910.10 1 64 1.0E-34 T 22-04-2016 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 SUPERFAMILY SSF51905 313 370 3.56E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 SUPERFAMILY SSF51905 2 216 3.56E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Pfam PF01266 FAD dependent oxidoreductase 4 350 7.7E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 SUPERFAMILY SSF54373 212 313 2.63E-20 T 22-04-2016 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 PANTHER PTHR10961:SF7 1 371 1.5E-119 T 22-04-2016 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.30.9.10 59 145 1.2E-52 T 22-04-2016 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.30.9.10 211 313 1.2E-52 T 22-04-2016 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.50.50.60 146 208 6.9E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.50.50.60 2 57 6.9E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Gene3D G3DSA:3.50.50.60 316 370 6.9E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 PANTHER PTHR10961 1 371 1.5E-119 T 22-04-2016 YPO2448 c64d57ba96a9f0c5ec3fe6f39cc6dd7c 371 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 77.871 T 22-04-2016 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 YPO1601 901a7ed3a676152af2cf18812316ea5b 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 8.0E-62 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1601 901a7ed3a676152af2cf18812316ea5b 413 SMART SM00825 Beta-ketoacyl synthase 6 413 4.3E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1601 901a7ed3a676152af2cf18812316ea5b 413 PIRSF PIRSF000447 1 413 3.5E-203 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YPO1601 901a7ed3a676152af2cf18812316ea5b 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.0E-197 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YPO1601 901a7ed3a676152af2cf18812316ea5b 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YPO1601 901a7ed3a676152af2cf18812316ea5b 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.5E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1601 901a7ed3a676152af2cf18812316ea5b 413 PANTHER PTHR11712 3 412 9.0E-214 T 22-04-2016 YPO1601 901a7ed3a676152af2cf18812316ea5b 413 Gene3D G3DSA:3.40.47.10 263 412 4.6E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1601 901a7ed3a676152af2cf18812316ea5b 413 SUPERFAMILY SSF53901 215 412 1.54E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1601 901a7ed3a676152af2cf18812316ea5b 413 SUPERFAMILY SSF53901 3 252 8.51E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1601 901a7ed3a676152af2cf18812316ea5b 413 Gene3D G3DSA:3.40.47.10 2 260 4.5E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2182 28ffda3de7bf2647417a48c451db5a6c 545 PANTHER PTHR30290 1 545 1.0E-216 T 22-04-2016 YPO2182 28ffda3de7bf2647417a48c451db5a6c 545 Gene3D G3DSA:3.10.105.10 312 513 2.1E-60 T 22-04-2016 YPO2182 28ffda3de7bf2647417a48c451db5a6c 545 Gene3D G3DSA:3.40.190.10 160 311 4.1E-57 T 22-04-2016 YPO2182 28ffda3de7bf2647417a48c451db5a6c 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YPO2182 28ffda3de7bf2647417a48c451db5a6c 545 PANTHER PTHR30290:SF10 1 545 1.0E-216 T 22-04-2016 YPO2182 28ffda3de7bf2647417a48c451db5a6c 545 PIRSF PIRSF002741 1 545 5.6E-114 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPO2182 28ffda3de7bf2647417a48c451db5a6c 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 1.1E-86 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPO2182 28ffda3de7bf2647417a48c451db5a6c 545 SUPERFAMILY SSF53850 38 527 1.03E-145 T 22-04-2016 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 SUPERFAMILY SSF56655 1 258 1.96E-85 T 22-04-2016 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 Pfam PF00459 Inositol monophosphatase family 2 257 2.3E-70 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 Gene3D G3DSA:3.30.540.10 2 152 2.5E-51 T 22-04-2016 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PANTHER PTHR20854:SF4 1 267 2.3E-107 T 22-04-2016 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PANTHER PTHR20854 1 267 2.3E-107 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.2E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.2E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.2E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.2E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YPO2899 d0c5e8d040df7b8f56109d8bc12c6dd8 267 Gene3D G3DSA:3.40.190.80 153 259 9.4E-39 T 22-04-2016 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 SMART SM00421 146 203 3.7E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 Pfam PF00072 Response regulator receiver domain 4 116 3.8E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 SUPERFAMILY SSF52172 3 131 2.99E-31 T 22-04-2016 IPR011006 CheY-like superfamily YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 SUPERFAMILY SSF46894 136 210 3.4E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 PANTHER PTHR26402:SF506 2 215 1.5E-111 T 22-04-2016 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 Gene3D G3DSA:1.10.10.10 127 210 8.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 SMART SM00448 2 115 4.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 PANTHER PTHR26402 2 215 1.5E-111 T 22-04-2016 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.7E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1865 e0f975ea7bbb881a38438d3b97f1d90b 218 Gene3D G3DSA:3.40.50.2300 2 126 9.0E-33 T 22-04-2016 YPO0067 75b036a4a4126578e953652e051d25b3 158 Gene3D G3DSA:3.10.420.10 2 147 6.3E-64 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPO0067 75b036a4a4126578e953652e051d25b3 158 SUPERFAMILY SSF54611 2 141 2.4E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPO0067 75b036a4a4126578e953652e051d25b3 158 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.658 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPO0067 75b036a4a4126578e953652e051d25b3 158 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.5E-57 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPO0067 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 1.7E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPO0067 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.7E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPO0067 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 1.7E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPO0067 75b036a4a4126578e953652e051d25b3 158 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 1.7E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPO0067 75b036a4a4126578e953652e051d25b3 158 PANTHER PTHR36918:SF1 6 156 1.7E-91 T 22-04-2016 YPO0067 75b036a4a4126578e953652e051d25b3 158 PANTHER PTHR36918 6 156 1.7E-91 T 22-04-2016 YPO0067 75b036a4a4126578e953652e051d25b3 158 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 146 3.5E-69 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YPO1742 9c7020ff8bfe6ef74d0c214c9179a29f 81 Pfam PF13269 Protein of unknown function (DUF4060) 3 75 2.6E-39 T 22-04-2016 IPR025135 Protein of unknown function DUF4060 YPO1370 25ddc8d907d8c6cdf9a50a3e27ba432a 72 PANTHER PTHR33370 1 72 1.5E-49 T 22-04-2016 YPO1370 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YPO1370 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.8E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 YPO1370 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 71 2.9E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1370 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YPO1370 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1370 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 Pfam PF08402 TOBE domain 290 361 3.0E-9 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 PANTHER PTHR24220:SF151 6 320 2.8E-161 T 22-04-2016 YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 SUPERFAMILY SSF50331 243 369 4.86E-26 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 Pfam PF00005 ABC transporter 21 163 4.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 PANTHER PTHR24220 6 320 2.8E-161 T 22-04-2016 YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 Gene3D G3DSA:2.40.50.100 355 370 4.5E-19 T 22-04-2016 YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 Gene3D G3DSA:2.40.50.100 246 293 4.5E-19 T 22-04-2016 YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 Gene3D G3DSA:2.40.50.140 294 353 3.3E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 SMART SM00382 30 218 8.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 SUPERFAMILY SSF52540 6 249 6.6E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0609 571f236d36fb6ca2a7cccda37e74c2fd 372 Gene3D G3DSA:3.40.50.300 7 240 4.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PANTHER PTHR24322 162 193 3.4E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PANTHER PTHR24322 21 146 3.4E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 Gene3D G3DSA:3.40.50.720 12 255 1.7E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 5.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 5.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 5.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 254 1.1E-68 T 22-04-2016 YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 SUPERFAMILY SSF51735 16 255 9.52E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PANTHER PTHR24322:SF242 162 193 3.4E-61 T 22-04-2016 YPO3351 b9832fc0ea6371e08072f2931162f3f6 256 PANTHER PTHR24322:SF242 21 146 3.4E-61 T 22-04-2016 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 Gene3D G3DSA:3.20.20.10 53 261 1.7E-41 T 22-04-2016 IPR029066 PLP-binding barrel YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 PANTHER PTHR30511:SF0 39 409 4.8E-131 T 22-04-2016 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 SUPERFAMILY SSF50621 275 408 1.12E-40 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 Gene3D G3DSA:2.40.37.10 262 408 2.4E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 SMART SM01005 280 408 4.8E-48 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 313 328 4.6E-24 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 334 351 4.6E-24 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 202 213 4.6E-24 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 245 272 4.6E-24 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 166 178 4.6E-24 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 104 122 4.6E-24 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 PRINTS PR00992 Alanine racemase signature 68 84 4.6E-24 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 Pfam PF01168 Alanine racemase, N-terminal domain 49 270 7.0E-42 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 Pfam PF00842 Alanine racemase, C-terminal domain 280 396 4.9E-29 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 SUPERFAMILY SSF51419 49 280 2.04E-41 T 22-04-2016 IPR029066 PLP-binding barrel YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 Hamap MF_01201 Alanine racemase. 42 408 24.529 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 TIGRFAM TIGR00492 alr: alanine racemase 44 393 1.9E-63 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 PANTHER PTHR30511 39 409 4.8E-131 T 22-04-2016 YPO1687 14c4cdca4f2a365ffaea98baf9f76d5c 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 73 83 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO2797 20813ada10506e551cb2692cd9d35fbd 193 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 99 191 4.7E-21 T 22-04-2016 IPR021561 Transcriptional regulator, AbiEi_3 antitoxin, Type IV TA system YPO2797 20813ada10506e551cb2692cd9d35fbd 193 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 4 94 1.4E-29 T 22-04-2016 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PANTHER PTHR13697 3 299 1.0E-131 T 22-04-2016 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 Gene3D G3DSA:3.40.50.450 3 216 1.5E-75 T 22-04-2016 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 Pfam PF00365 Phosphofructokinase 4 277 5.3E-107 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 327 44.808 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PIRSF PIRSF000532 1 327 6.4E-124 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 2.6E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 302 1.4E-120 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO0078 d1228ac925fd8a3e54d81bcd31f2616f 327 SUPERFAMILY SSF53784 3 315 1.16E-108 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YPO3674 0bef154fb16ebf5e14fd034fb224862f 1011 PANTHER PTHR11219 25 770 0.0 T 22-04-2016 YPO3674 0bef154fb16ebf5e14fd034fb224862f 1011 Pfam PF00782 Dual specificity phosphatase, catalytic domain 886 945 2.3E-9 T 22-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 YPO3674 0bef154fb16ebf5e14fd034fb224862f 1011 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 921 931 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 YPO3674 0bef154fb16ebf5e14fd034fb224862f 1011 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 657 737 1.5E-26 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPO3674 0bef154fb16ebf5e14fd034fb224862f 1011 Gene3D G3DSA:3.90.190.10 859 1008 9.0E-14 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPO3674 0bef154fb16ebf5e14fd034fb224862f 1011 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 289 317 3.2E-4 T 22-04-2016 IPR006530 YD repeat YPO3674 0bef154fb16ebf5e14fd034fb224862f 1011 PANTHER PTHR11219:SF45 25 770 0.0 T 22-04-2016 YPO3674 0bef154fb16ebf5e14fd034fb224862f 1011 SUPERFAMILY SSF52799 822 944 2.58E-12 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 SUPERFAMILY SSF52540 3 227 6.41E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 PANTHER PTHR24220 6 380 1.4E-282 T 22-04-2016 YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 Gene3D G3DSA:3.40.50.300 2 229 6.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 PANTHER PTHR24220:SF440 6 380 1.4E-282 T 22-04-2016 YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 SUPERFAMILY SSF52540 263 484 6.23E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 SMART SM00382 29 217 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 SMART SM00382 280 474 1.1E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 Pfam PF00005 ABC transporter 20 169 4.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 Pfam PF00005 ABC transporter 272 425 9.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3907 2b09b2c874d857115d485cf0eb1c513d 496 Gene3D G3DSA:3.40.50.300 258 485 7.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0294 a2b1f4f127716c47c3b2ab6014f57897 197 PANTHER PTHR32097 1 197 2.4E-84 T 22-04-2016 YPO0294 a2b1f4f127716c47c3b2ab6014f57897 197 Pfam PF02342 TerD domain 2 185 5.7E-47 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPO0294 a2b1f4f127716c47c3b2ab6014f57897 197 PANTHER PTHR32097:SF7 1 197 2.4E-84 T 22-04-2016 YPO0294 a2b1f4f127716c47c3b2ab6014f57897 197 Gene3D G3DSA:2.60.60.30 19 185 1.5E-54 T 22-04-2016 YPO0405 c3826584f75931f960c343fc1ca92819 852 SUPERFAMILY SSF55594 4 88 3.66E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO0405 c3826584f75931f960c343fc1ca92819 852 SUPERFAMILY SSF52009 255 373 1.44E-21 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO0405 c3826584f75931f960c343fc1ca92819 852 PANTHER PTHR22931 195 681 0.0 T 22-04-2016 YPO0405 c3826584f75931f960c343fc1ca92819 852 PRINTS PR00107 Phosphocarrier protein signature 14 30 7.8E-6 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO0405 c3826584f75931f960c343fc1ca92819 852 PRINTS PR00107 Phosphocarrier protein signature 41 56 7.8E-6 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO0405 c3826584f75931f960c343fc1ca92819 852 PRINTS PR00107 Phosphocarrier protein signature 56 73 7.8E-6 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO0405 c3826584f75931f960c343fc1ca92819 852 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 177 695 6.9E-137 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YPO0405 c3826584f75931f960c343fc1ca92819 852 Pfam PF00381 PTS HPr component phosphorylation site 6 85 1.5E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO0405 c3826584f75931f960c343fc1ca92819 852 Gene3D G3DSA:3.30.1340.10 4 88 6.9E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO0405 c3826584f75931f960c343fc1ca92819 852 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO0405 c3826584f75931f960c343fc1ca92819 852 Gene3D G3DSA:1.10.274.10 172 262 8.5E-14 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPO0405 c3826584f75931f960c343fc1ca92819 852 SUPERFAMILY SSF47831 169 273 7.72E-15 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPO0405 c3826584f75931f960c343fc1ca92819 852 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 711 848 4.9E-30 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO0405 c3826584f75931f960c343fc1ca92819 852 Pfam PF05524 PEP-utilising enzyme, N-terminal 122 256 9.3E-12 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPO0405 c3826584f75931f960c343fc1ca92819 852 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 382 672 1.6E-100 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YPO0405 c3826584f75931f960c343fc1ca92819 852 Gene3D G3DSA:3.50.30.10 263 384 1.1E-25 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO0405 c3826584f75931f960c343fc1ca92819 852 PANTHER PTHR22931:SF24 195 681 0.0 T 22-04-2016 YPO0405 c3826584f75931f960c343fc1ca92819 852 SUPERFAMILY SSF55804 708 847 1.07E-28 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPO0405 c3826584f75931f960c343fc1ca92819 852 Pfam PF00391 PEP-utilising enzyme, mobile domain 284 356 7.2E-14 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO0405 c3826584f75931f960c343fc1ca92819 852 Gene3D G3DSA:3.40.930.10 707 849 1.7E-39 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO0405 c3826584f75931f960c343fc1ca92819 852 Gene3D G3DSA:3.20.20.60 385 699 1.1E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO0405 c3826584f75931f960c343fc1ca92819 852 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 578 596 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YPO0405 c3826584f75931f960c343fc1ca92819 852 SUPERFAMILY SSF51621 383 679 1.86E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO0405 c3826584f75931f960c343fc1ca92819 852 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 595 610 9.0E-21 T 22-04-2016 YPO0405 c3826584f75931f960c343fc1ca92819 852 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 578 593 9.0E-21 T 22-04-2016 YPO0405 c3826584f75931f960c343fc1ca92819 852 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 631 643 9.0E-21 T 22-04-2016 YPO0405 c3826584f75931f960c343fc1ca92819 852 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 424 443 9.0E-21 T 22-04-2016 YPO0405 c3826584f75931f960c343fc1ca92819 852 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 315 326 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 PANTHER PTHR35892:SF2 4 182 2.4E-62 T 22-04-2016 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 Pfam PF13505 Outer membrane protein beta-barrel domain 14 182 2.7E-33 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 SUPERFAMILY SSF56925 32 182 1.31E-32 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 PANTHER PTHR35892 4 182 2.4E-62 T 22-04-2016 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 54 62 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 170 181 3.0E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 143 164 3.0E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 96 119 3.0E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 53 65 3.0E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 174 182 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2905 bc2bc90654ccb79ab89c370b0cd6e932 182 Gene3D G3DSA:2.40.160.20 30 182 2.1E-42 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2583 4e3c38fba62c39dd5f3abff8a16e2836 342 PANTHER PTHR32196:SF21 23 339 5.0E-109 T 22-04-2016 YPO2583 4e3c38fba62c39dd5f3abff8a16e2836 342 PANTHER PTHR32196 23 339 5.0E-109 T 22-04-2016 YPO2583 4e3c38fba62c39dd5f3abff8a16e2836 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 329 1.1E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO2844 dfb6cf41957b6c8512d57f730b6006e5 437 Gene3D G3DSA:3.90.1150.10 320 436 3.7E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO2844 dfb6cf41957b6c8512d57f730b6006e5 437 Pfam PF00202 Aminotransferase class-III 32 434 9.5E-118 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO2844 dfb6cf41957b6c8512d57f730b6006e5 437 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 288 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO2844 dfb6cf41957b6c8512d57f730b6006e5 437 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 16 436 1.4E-174 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 YPO2844 dfb6cf41957b6c8512d57f730b6006e5 437 PANTHER PTHR11986:SF17 12 435 9.9E-187 T 22-04-2016 YPO2844 dfb6cf41957b6c8512d57f730b6006e5 437 PANTHER PTHR11986 12 435 9.9E-187 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO2844 dfb6cf41957b6c8512d57f730b6006e5 437 SUPERFAMILY SSF53383 31 435 2.02E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO2844 dfb6cf41957b6c8512d57f730b6006e5 437 Gene3D G3DSA:3.40.640.10 66 319 4.1E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO4001 d1d999c08d6135b2936d866075a4f8a0 300 PANTHER PTHR30465:SF10 10 300 7.1E-144 T 22-04-2016 YPO4001 d1d999c08d6135b2936d866075a4f8a0 300 Gene3D G3DSA:1.10.3720.10 88 296 1.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4001 d1d999c08d6135b2936d866075a4f8a0 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 6.6E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4001 d1d999c08d6135b2936d866075a4f8a0 300 PANTHER PTHR30465 10 300 7.1E-144 T 22-04-2016 YPO4001 d1d999c08d6135b2936d866075a4f8a0 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 6.8E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO4001 d1d999c08d6135b2936d866075a4f8a0 300 SUPERFAMILY SSF161098 93 280 1.57E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0027 14f51367caea4db5569375798f835c92 196 Gene3D G3DSA:1.10.150.240 16 76 2.4E-33 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO0027 14f51367caea4db5569375798f835c92 196 PANTHER PTHR12725:SF63 4 189 1.8E-50 T 22-04-2016 YPO0027 14f51367caea4db5569375798f835c92 196 SUPERFAMILY SSF56784 3 188 1.06E-41 T 22-04-2016 IPR023214 HAD-like domain YPO0027 14f51367caea4db5569375798f835c92 196 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 184 4.0E-17 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0027 14f51367caea4db5569375798f835c92 196 Gene3D G3DSA:3.40.50.1000 77 190 3.7E-31 T 22-04-2016 IPR023214 HAD-like domain YPO0027 14f51367caea4db5569375798f835c92 196 Pfam PF13419 Haloacid dehalogenase-like hydrolase 60 184 2.7E-9 T 22-04-2016 IPR023214 HAD-like domain YPO0027 14f51367caea4db5569375798f835c92 196 PANTHER PTHR12725 4 189 1.8E-50 T 22-04-2016 YPO0869 212097ebdbab9a67dacf514af643495e 238 Pfam PF11340 Protein of unknown function (DUF3142) 80 171 7.3E-15 T 22-04-2016 IPR021488 Protein of unknown function DUF3142 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 PANTHER PTHR11019 17 273 7.2E-141 T 22-04-2016 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 PANTHER PTHR11019:SF119 17 273 7.2E-141 T 22-04-2016 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 Pfam PF12833 Helix-turn-helix domain 190 265 3.2E-11 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 SMART SM00342 183 265 2.9E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 Gene3D G3DSA:2.60.120.280 34 155 2.8E-4 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 SUPERFAMILY SSF51215 34 154 8.5E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 Gene3D G3DSA:1.10.10.60 218 270 4.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1837 3cd362ebff1f96e508661f277bf2906c 291 SUPERFAMILY SSF46689 218 270 7.62E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1468 7bde1b93e66760c3577d9e7717678841 228 Pfam PF09850 Type VI secretion system protein DotU 14 215 1.4E-46 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO1468 7bde1b93e66760c3577d9e7717678841 228 PANTHER PTHR38033 1 228 6.0E-100 T 22-04-2016 YPO1468 7bde1b93e66760c3577d9e7717678841 228 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 14 218 2.0E-48 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO1468 7bde1b93e66760c3577d9e7717678841 228 PANTHER PTHR38033:SF1 1 228 6.0E-100 T 22-04-2016 YPO0975 7bde1b93e66760c3577d9e7717678841 228 Pfam PF09850 Type VI secretion system protein DotU 14 215 1.4E-46 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO0975 7bde1b93e66760c3577d9e7717678841 228 PANTHER PTHR38033 1 228 6.0E-100 T 22-04-2016 YPO0975 7bde1b93e66760c3577d9e7717678841 228 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 14 218 2.0E-48 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO0975 7bde1b93e66760c3577d9e7717678841 228 PANTHER PTHR38033:SF1 1 228 6.0E-100 T 22-04-2016 YPO3630 cf6f1d331209f4789ab1b27376493a8c 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 1.5E-206 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 YPO3630 cf6f1d331209f4789ab1b27376493a8c 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 1.1E-79 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YPO3630 cf6f1d331209f4789ab1b27376493a8c 549 PANTHER PTHR10110 1 539 1.1E-211 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 YPO3630 cf6f1d331209f4789ab1b27376493a8c 549 PANTHER PTHR10110:SF120 1 539 1.1E-211 T 22-04-2016 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 Gene3D G3DSA:3.30.470.20 96 239 7.8E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 Gene3D G3DSA:3.30.1490.20 22 95 1.3E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 PIRSF PIRSF001554 1 388 1.6E-154 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 8.6E-182 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 Gene3D G3DSA:3.40.50.261 241 383 1.1E-64 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 SUPERFAMILY SSF52210 240 385 1.96E-52 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 Pfam PF00549 CoA-ligase 262 382 4.3E-24 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 Pfam PF08442 ATP-grasp domain 2 203 2.8E-83 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.14 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 PANTHER PTHR11815 1 388 5.6E-236 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YPO1115 302da6befff8057832dbd8bbbcc08d3a 388 SUPERFAMILY SSF56059 1 238 2.65E-81 T 22-04-2016 YPO0987 a8b5bea0eba78fef093abfeed8d4ecd9 277 PANTHER PTHR34315 1 277 1.0E-102 T 22-04-2016 YPO0987 a8b5bea0eba78fef093abfeed8d4ecd9 277 SUPERFAMILY SSF49482 41 261 1.18E-44 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 YPO0987 a8b5bea0eba78fef093abfeed8d4ecd9 277 Pfam PF00775 Dioxygenase 71 167 5.0E-8 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 YPO0987 a8b5bea0eba78fef093abfeed8d4ecd9 277 PANTHER PTHR34315:SF1 1 277 1.0E-102 T 22-04-2016 YPO0987 a8b5bea0eba78fef093abfeed8d4ecd9 277 Gene3D G3DSA:2.60.130.10 43 234 9.5E-44 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 YPO3919 ed73d126e999fffff854995037708c26 442 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 28 442 1.6E-109 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 YPO3919 ed73d126e999fffff854995037708c26 442 Pfam PF13533 Biotin-lipoyl like 69 111 1.2E-7 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 406 421 3.3E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO3919 ed73d126e999fffff854995037708c26 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 35 58 3.3E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO3919 ed73d126e999fffff854995037708c26 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 331 3.3E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO3919 ed73d126e999fffff854995037708c26 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 3.3E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO3919 ed73d126e999fffff854995037708c26 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 367 3.3E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO3919 ed73d126e999fffff854995037708c26 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 421 441 3.3E-51 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO3919 ed73d126e999fffff854995037708c26 442 Pfam PF13437 HlyD family secretion protein 298 409 1.2E-13 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 PANTHER PTHR30386 1 120 1.9E-201 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 PANTHER PTHR30386 157 442 1.9E-201 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 SUPERFAMILY SSF111369 232 344 2.62E-6 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 PANTHER PTHR30386:SF3 1 120 1.9E-201 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 PANTHER PTHR30386:SF3 157 442 1.9E-201 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 SUPERFAMILY SSF111369 65 124 8.76E-5 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 Gene3D G3DSA:2.40.50.100 295 329 1.6E-16 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 Gene3D G3DSA:2.40.50.100 68 99 1.6E-16 T 22-04-2016 YPO3919 ed73d126e999fffff854995037708c26 442 ProSitePatterns PS00543 HlyD family secretion proteins signature. 406 428 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 YPO0530 cdeb1c94b04323ae3b595b877d1297fe 200 PANTHER PTHR11670 1 200 2.1E-121 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0530 cdeb1c94b04323ae3b595b877d1297fe 200 Pfam PF00694 Aconitase C-terminal domain 1 125 6.9E-39 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0530 cdeb1c94b04323ae3b595b877d1297fe 200 Gene3D G3DSA:3.20.19.10 7 195 8.4E-47 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO0530 cdeb1c94b04323ae3b595b877d1297fe 200 PANTHER PTHR11670:SF27 1 200 2.1E-121 T 22-04-2016 YPO0530 cdeb1c94b04323ae3b595b877d1297fe 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.959 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0530 cdeb1c94b04323ae3b595b877d1297fe 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 1.4E-97 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0530 cdeb1c94b04323ae3b595b877d1297fe 200 SUPERFAMILY SSF52016 3 197 3.34E-60 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO3959 0e7effc6ca06b031c06b8561abe2d295 335 PANTHER PTHR10584 1 308 2.8E-68 T 22-04-2016 YPO3959 0e7effc6ca06b031c06b8561abe2d295 335 PANTHER PTHR10584:SF166 1 308 2.8E-68 T 22-04-2016 YPO3959 0e7effc6ca06b031c06b8561abe2d295 335 Pfam PF00294 pfkB family carbohydrate kinase 29 319 8.8E-34 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPO3959 0e7effc6ca06b031c06b8561abe2d295 335 SUPERFAMILY SSF53613 6 328 4.99E-52 T 22-04-2016 IPR029056 Ribokinase-like YPO3959 0e7effc6ca06b031c06b8561abe2d295 335 Gene3D G3DSA:3.40.1190.20 4 333 4.8E-54 T 22-04-2016 IPR029056 Ribokinase-like YPO1719 e2afff79b72f8a2c9235b929d37cc9ff 430 Pfam PF01547 Bacterial extracellular solute-binding protein 47 333 7.2E-25 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YPO1719 e2afff79b72f8a2c9235b929d37cc9ff 430 Gene3D G3DSA:3.40.190.10 157 346 1.2E-20 T 22-04-2016 YPO1719 e2afff79b72f8a2c9235b929d37cc9ff 430 Gene3D G3DSA:3.40.190.10 39 156 3.9E-16 T 22-04-2016 YPO1719 e2afff79b72f8a2c9235b929d37cc9ff 430 PANTHER PTHR30061 1 430 2.7E-88 T 22-04-2016 YPO1719 e2afff79b72f8a2c9235b929d37cc9ff 430 SUPERFAMILY SSF53850 26 427 9.32E-64 T 22-04-2016 YPO1719 e2afff79b72f8a2c9235b929d37cc9ff 430 PANTHER PTHR30061:SF1 1 430 2.7E-88 T 22-04-2016 YPO3593 20429a036c54450b44994eddd7253e83 245 PANTHER PTHR35370 7 245 2.5E-88 T 22-04-2016 YPO3593 20429a036c54450b44994eddd7253e83 245 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 4 244 1.2E-70 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO3593 20429a036c54450b44994eddd7253e83 245 PANTHER PTHR35370:SF4 7 245 2.5E-88 T 22-04-2016 YPO0829 fd4a881e9bffed600f03888049eee35b 517 Gene3D G3DSA:3.30.1120.10 427 511 1.1E-19 T 22-04-2016 YPO0829 fd4a881e9bffed600f03888049eee35b 517 PANTHER PTHR10342 16 508 8.2E-203 T 22-04-2016 YPO0829 fd4a881e9bffed600f03888049eee35b 517 Pfam PF00884 Sulfatase 44 396 1.2E-54 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPO0829 fd4a881e9bffed600f03888049eee35b 517 SUPERFAMILY SSF53649 42 505 7.98E-97 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO0829 fd4a881e9bffed600f03888049eee35b 517 PANTHER PTHR10342:SF238 16 508 8.2E-203 T 22-04-2016 YPO0829 fd4a881e9bffed600f03888049eee35b 517 Gene3D G3DSA:3.40.720.10 41 415 2.9E-82 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO3466 021fb8e4bf623bd8a980fd8a3c6b16d3 212 SMART SM00859 3 101 0.0054 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPO3466 021fb8e4bf623bd8a980fd8a3c6b16d3 212 SUPERFAMILY SSF51735 1 199 5.96E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3466 021fb8e4bf623bd8a980fd8a3c6b16d3 212 PANTHER PTHR14097 3 206 7.5E-67 T 22-04-2016 YPO3466 021fb8e4bf623bd8a980fd8a3c6b16d3 212 Gene3D G3DSA:3.40.50.720 2 207 9.5E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3466 021fb8e4bf623bd8a980fd8a3c6b16d3 212 PANTHER PTHR14097:SF7 3 206 7.5E-67 T 22-04-2016 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 374 1.2E-128 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 384 483 3.9E-43 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Pfam PF02926 THUMP domain 29 162 1.4E-23 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 230.324 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Gene3D G3DSA:3.40.50.620 174 334 3.1E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 SUPERFAMILY SSF52402 175 373 6.17E-42 T 22-04-2016 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 SMART SM00981 76 166 2.9E-22 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 370 2.8E-79 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 SUPERFAMILY SSF52821 392 482 3.01E-12 T 22-04-2016 IPR001763 Rhodanese-like domain YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 PANTHER PTHR14911 3 418 2.3E-294 T 22-04-2016 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 SUPERFAMILY SSF143437 1 174 8.89E-47 T 22-04-2016 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 PANTHER PTHR14911:SF15 3 418 2.3E-294 T 22-04-2016 YPO3173 1aa1d2a8819dc6accb26e4f90dcafe2c 483 Gene3D G3DSA:3.40.250.10 397 481 2.5E-10 T 22-04-2016 IPR001763 Rhodanese-like domain YPO3822 d9748e3c435080e54d89706c5a74d8f6 222 PANTHER PTHR34300 1 222 1.4E-130 T 22-04-2016 YPO3822 d9748e3c435080e54d89706c5a74d8f6 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 9.0E-34 T 22-04-2016 IPR003744 Protein of unknown function DUF165 YPO3822 d9748e3c435080e54d89706c5a74d8f6 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 2.6E-62 T 22-04-2016 IPR003744 Protein of unknown function DUF165 YPO3822 d9748e3c435080e54d89706c5a74d8f6 222 PANTHER PTHR34300:SF1 1 222 1.4E-130 T 22-04-2016 YPO3563 5d73bf0d848d5778405ad66e5a089275 142 Pfam PF00572 Ribosomal protein L13 15 138 1.1E-56 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YPO3563 5d73bf0d848d5778405ad66e5a089275 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.2E-67 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 YPO3563 5d73bf0d848d5778405ad66e5a089275 142 SUPERFAMILY SSF52161 1 140 2.35E-60 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 YPO3563 5d73bf0d848d5778405ad66e5a089275 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 YPO3563 5d73bf0d848d5778405ad66e5a089275 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.544 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YPO3563 5d73bf0d848d5778405ad66e5a089275 142 PANTHER PTHR11545 1 142 2.4E-81 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YPO3563 5d73bf0d848d5778405ad66e5a089275 142 PIRSF PIRSF002181 1 142 1.0E-50 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YPO3563 5d73bf0d848d5778405ad66e5a089275 142 Gene3D G3DSA:3.90.1180.10 3 141 9.0E-65 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 469 57.559 T 22-04-2016 IPR026589 Cell division protein FtsP GO:0043093 YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 Gene3D G3DSA:2.60.40.420 174 288 2.9E-30 T 22-04-2016 IPR008972 Cupredoxin YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 SUPERFAMILY SSF49503 3 166 3.88E-26 T 22-04-2016 IPR008972 Cupredoxin YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 SUPERFAMILY SSF49503 316 467 2.6E-17 T 22-04-2016 IPR008972 Cupredoxin YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 Gene3D G3DSA:2.60.40.420 34 173 5.3E-21 T 22-04-2016 IPR008972 Cupredoxin YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 Gene3D G3DSA:2.60.40.420 360 467 9.7E-11 T 22-04-2016 IPR008972 Cupredoxin YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 Pfam PF07731 Multicopper oxidase 362 468 1.0E-13 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 SUPERFAMILY SSF49503 173 296 2.93E-31 T 22-04-2016 IPR008972 Cupredoxin YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 Pfam PF07732 Multicopper oxidase 53 167 6.1E-26 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 PANTHER PTHR11709 53 305 4.0E-184 T 22-04-2016 YPO0673 2789b42b9606eac5f827eb36d1c4511e 474 PANTHER PTHR11709:SF69 53 305 4.0E-184 T 22-04-2016 YPO0813 36f064ec6082ada08017705c09492430 145 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 26 6.7E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO0813 36f064ec6082ada08017705c09492430 145 Pfam PF08334 Type II secretion system (T2SS), protein G 32 137 4.9E-36 T 22-04-2016 IPR013545 Type II secretion system protein G YPO0813 36f064ec6082ada08017705c09492430 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 8.0E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YPO0813 36f064ec6082ada08017705c09492430 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 8.0E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YPO0813 36f064ec6082ada08017705c09492430 145 SUPERFAMILY SSF54523 35 138 2.56E-36 T 22-04-2016 YPO0813 36f064ec6082ada08017705c09492430 145 PANTHER PTHR30093 1 137 3.1E-74 T 22-04-2016 YPO0813 36f064ec6082ada08017705c09492430 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 8.6E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO0813 36f064ec6082ada08017705c09492430 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 137 1.8E-60 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 YPO0813 36f064ec6082ada08017705c09492430 145 PANTHER PTHR30093:SF9 1 137 3.1E-74 T 22-04-2016 YPO0813 36f064ec6082ada08017705c09492430 145 Gene3D G3DSA:3.30.700.10 9 73 2.7E-10 T 22-04-2016 YPO0813 36f064ec6082ada08017705c09492430 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO3904 83f29f6548ec01705871670b25a500e7 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3904 83f29f6548ec01705871670b25a500e7 293 Gene3D G3DSA:3.40.190.10 85 174 1.2E-9 T 22-04-2016 YPO3904 83f29f6548ec01705871670b25a500e7 293 SUPERFAMILY SSF53850 90 283 4.34E-24 T 22-04-2016 YPO3904 83f29f6548ec01705871670b25a500e7 293 Gene3D G3DSA:1.10.10.10 2 82 9.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3904 83f29f6548ec01705871670b25a500e7 293 PANTHER PTHR30579:SF0 1 280 3.1E-114 T 22-04-2016 YPO3904 83f29f6548ec01705871670b25a500e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3904 83f29f6548ec01705871670b25a500e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3904 83f29f6548ec01705871670b25a500e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3904 83f29f6548ec01705871670b25a500e7 293 Pfam PF03466 LysR substrate binding domain 88 280 1.0E-22 T 22-04-2016 IPR005119 LysR, substrate-binding YPO3904 83f29f6548ec01705871670b25a500e7 293 SUPERFAMILY SSF46785 2 81 6.93E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3904 83f29f6548ec01705871670b25a500e7 293 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 287 61.156 T 22-04-2016 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 YPO3904 83f29f6548ec01705871670b25a500e7 293 PANTHER PTHR30579 1 280 3.1E-114 T 22-04-2016 YPO0514 a749025ef76a112dd67a1c887cca9e92 536 PANTHER PTHR30329:SF4 307 531 9.2E-122 T 22-04-2016 YPO0514 a749025ef76a112dd67a1c887cca9e92 536 PANTHER PTHR30329:SF4 200 276 9.2E-122 T 22-04-2016 YPO0514 a749025ef76a112dd67a1c887cca9e92 536 Pfam PF09850 Type VI secretion system protein DotU 145 336 9.1E-42 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO0514 a749025ef76a112dd67a1c887cca9e92 536 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 142 343 1.7E-49 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO0514 a749025ef76a112dd67a1c887cca9e92 536 Pfam PF00691 OmpA family 398 501 8.3E-11 T 22-04-2016 IPR006665 OmpA-like domain YPO0514 a749025ef76a112dd67a1c887cca9e92 536 Gene3D G3DSA:3.30.1330.60 377 506 2.0E-24 T 22-04-2016 IPR006665 OmpA-like domain YPO0514 a749025ef76a112dd67a1c887cca9e92 536 SUPERFAMILY SSF103088 385 507 1.01E-20 T 22-04-2016 IPR006665 OmpA-like domain YPO0514 a749025ef76a112dd67a1c887cca9e92 536 PANTHER PTHR30329 307 531 9.2E-122 T 22-04-2016 YPO0514 a749025ef76a112dd67a1c887cca9e92 536 PANTHER PTHR30329 200 276 9.2E-122 T 22-04-2016 YPO2603 b8f8bc5d465199749e9adf230fbdcdbc 370 PANTHER PTHR30474 1 369 3.6E-182 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YPO2603 b8f8bc5d465199749e9adf230fbdcdbc 370 PANTHER PTHR30474:SF1 1 369 3.6E-182 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 YPO2603 b8f8bc5d465199749e9adf230fbdcdbc 370 Pfam PF01098 Cell cycle protein 21 364 6.8E-122 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YPO2603 b8f8bc5d465199749e9adf230fbdcdbc 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 4.9E-136 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 YPO2603 b8f8bc5d465199749e9adf230fbdcdbc 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 Pfam PF09313 Domain of unknown function (DUF1971) 16 96 2.0E-30 T 22-04-2016 IPR015392 Domain of unknown function DUF1971 YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 PANTHER PTHR10108 6 282 1.1E-110 T 22-04-2016 YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 Gene3D G3DSA:2.60.120.10 10 115 1.3E-49 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 Gene3D G3DSA:3.40.50.150 116 293 1.7E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 PIRSF PIRSF005215 1 295 4.3E-150 T 22-04-2016 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 Pfam PF03848 Tellurite resistance protein TehB 98 290 2.7E-112 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 SUPERFAMILY SSF51197 10 109 3.43E-37 T 22-04-2016 YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 PANTHER PTHR10108:SF927 6 282 1.1E-110 T 22-04-2016 YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 56 293 4.0E-110 T 22-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 YPO1949 15966b8b8bc4e3e67cb30a2e5674cee7 295 SUPERFAMILY SSF53335 75 282 6.39E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1523 c6b3b6a9c828649bcdc889729b416134 370 PANTHER PTHR23264 9 368 9.0E-195 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein YPO1523 c6b3b6a9c828649bcdc889729b416134 370 SUPERFAMILY SSF117916 14 85 8.83E-5 T 22-04-2016 YPO1523 c6b3b6a9c828649bcdc889729b416134 370 Gene3D G3DSA:3.40.50.300 95 350 7.4E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1523 c6b3b6a9c828649bcdc889729b416134 370 SUPERFAMILY SSF52540 109 356 3.35E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1523 c6b3b6a9c828649bcdc889729b416134 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 2.7E-99 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein YPO1523 c6b3b6a9c828649bcdc889729b416134 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.658 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein YPO1523 c6b3b6a9c828649bcdc889729b416134 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 YPO1523 c6b3b6a9c828649bcdc889729b416134 370 PANTHER PTHR23264:SF19 9 368 9.0E-195 T 22-04-2016 YPO0653 81045270d1ea719ae31422df80ba0671 951 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 27 945 19.763 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 YPO0653 81045270d1ea719ae31422df80ba0671 951 SUPERFAMILY SSF81593 815 943 7.53E-34 T 22-04-2016 YPO0653 81045270d1ea719ae31422df80ba0671 951 SUPERFAMILY SSF81301 10 286 1.21E-93 T 22-04-2016 YPO0653 81045270d1ea719ae31422df80ba0671 951 SUPERFAMILY SSF81301 526 813 1.01E-87 T 22-04-2016 YPO0653 81045270d1ea719ae31422df80ba0671 951 SUPERFAMILY SSF81593 287 436 5.49E-45 T 22-04-2016 YPO0653 81045270d1ea719ae31422df80ba0671 951 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 5.7E-48 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YPO0653 81045270d1ea719ae31422df80ba0671 951 Pfam PF08335 GlnD PII-uridylyltransferase 825 919 2.1E-10 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YPO0653 81045270d1ea719ae31422df80ba0671 951 PANTHER PTHR30621 1 942 0.0 T 22-04-2016 YPO0653 81045270d1ea719ae31422df80ba0671 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 2.9E-98 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 YPO0653 81045270d1ea719ae31422df80ba0671 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 276 1.5E-95 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 YPO0653 81045270d1ea719ae31422df80ba0671 951 Gene3D G3DSA:3.30.460.10 639 813 4.1E-62 T 22-04-2016 YPO0653 81045270d1ea719ae31422df80ba0671 951 Gene3D G3DSA:3.30.460.10 113 285 1.3E-62 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.1E-36 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.1E-36 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.1E-36 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.1E-36 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.1E-36 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.1E-36 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 7.6E-6 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 7.6E-6 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 SUPERFAMILY SSF52317 3 190 4.01E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PANTHER PTHR11922:SF25 1 189 3.0E-93 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 2.9E-55 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PANTHER PTHR11922 1 189 3.0E-93 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.2E-43 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 Gene3D G3DSA:3.40.50.880 3 188 3.5E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 7.0E-14 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 7.0E-14 T 22-04-2016 YPO2207 ee1dcdc0482a4740359c80b115538d49 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 7.0E-14 T 22-04-2016 YPO0392 fa968e67a0755b26238f05aeb107e7ca 240 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 138 9.4E-17 T 22-04-2016 YPO0392 fa968e67a0755b26238f05aeb107e7ca 240 Gene3D G3DSA:3.30.565.10 20 199 1.8E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0392 fa968e67a0755b26238f05aeb107e7ca 240 SUPERFAMILY SSF55874 23 228 5.4E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1399 25a4e74835404380a7460ec3fdfb6aed 60 PANTHER PTHR33505 1 58 5.9E-25 T 22-04-2016 YPO1399 25a4e74835404380a7460ec3fdfb6aed 60 SUPERFAMILY SSF158997 1 54 9.42E-20 T 22-04-2016 YPO1399 25a4e74835404380a7460ec3fdfb6aed 60 Gene3D G3DSA:2.20.25.10 8 58 5.4E-24 T 22-04-2016 YPO1399 25a4e74835404380a7460ec3fdfb6aed 60 Pfam PF03966 Trm112p-like protein 2 41 4.0E-9 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 YPO1399 25a4e74835404380a7460ec3fdfb6aed 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.854 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 3.9E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 205.725 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 Pfam PF01411 tRNA synthetases class II (A) 7 553 1.7E-232 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 SUPERFAMILY SSF55186 552 711 7.98E-53 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 SUPERFAMILY SSF55681 4 255 1.22E-107 T 22-04-2016 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 PANTHER PTHR11777 1 875 0.0 T 22-04-2016 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 SUPERFAMILY SSF101353 256 464 1.44E-60 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 PANTHER PTHR11777:SF9 1 875 0.0 T 22-04-2016 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 SUPERFAMILY SSF50447 456 552 1.07E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 Pfam PF02272 DHHA1 domain 800 868 1.3E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 SMART SM00863 653 696 9.0E-21 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YPO3305 5e3bef8994f712aae5e98fcb5909c64e 875 Gene3D G3DSA:3.30.930.10 4 251 4.7E-125 T 22-04-2016 YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 Pfam PF00248 Aldo/keto reductase family 29 271 5.2E-47 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 53 70 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 PANTHER PTHR11732:SF236 15 297 1.3E-153 T 22-04-2016 YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 SUPERFAMILY SSF51430 15 276 5.5E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 Gene3D G3DSA:3.20.20.100 15 277 2.8E-97 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 PRINTS PR00069 Aldo-keto reductase signature 49 73 1.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 PRINTS PR00069 Aldo-keto reductase signature 105 123 1.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 PRINTS PR00069 Aldo-keto reductase signature 134 151 1.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 PRINTS PR00069 Aldo-keto reductase signature 207 231 1.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 PRINTS PR00069 Aldo-keto reductase signature 168 197 1.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 PANTHER PTHR11732 15 297 1.3E-153 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPO2805 545e4d3cab6de0d7f4ee845c6af2be8e 297 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 134 151 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 SUPERFAMILY SSF55073 230 383 3.92E-19 T 22-04-2016 IPR029787 Nucleotide cyclase YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 Pfam PF00563 EAL domain 400 627 3.7E-38 T 22-04-2016 IPR001633 EAL domain YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 SMART SM00267 213 382 5.6E-17 T 22-04-2016 IPR000160 GGDEF domain YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 375 2.9E-22 T 22-04-2016 IPR000160 GGDEF domain YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 33 130 1.5E-33 T 22-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 PANTHER PTHR33121:SF10 394 630 2.3E-16 T 22-04-2016 YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 Gene3D G3DSA:3.30.70.270 227 387 1.2E-21 T 22-04-2016 YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 SMART SM00052 392 632 2.9E-24 T 22-04-2016 IPR001633 EAL domain YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 Gene3D G3DSA:3.20.20.450 395 631 1.4E-31 T 22-04-2016 IPR001633 EAL domain YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 PANTHER PTHR33121 394 630 2.3E-16 T 22-04-2016 YPO3664 5dfa1518d064688f1a4c4a1fa69e6571 638 SUPERFAMILY SSF141868 399 631 1.83E-34 T 22-04-2016 IPR001633 EAL domain YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 9.4E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 Gene3D G3DSA:3.40.630.10 397 484 1.5E-110 T 22-04-2016 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 Gene3D G3DSA:3.40.630.10 3 181 1.5E-110 T 22-04-2016 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PANTHER PTHR11014:SF54 204 279 5.0E-211 T 22-04-2016 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PANTHER PTHR11014:SF54 1 185 5.0E-211 T 22-04-2016 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 3.9E-183 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 2.1E-20 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 SUPERFAMILY SSF53187 397 482 2.04E-66 T 22-04-2016 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 SUPERFAMILY SSF53187 10 182 2.04E-66 T 22-04-2016 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PANTHER PTHR11014:SF54 330 486 5.0E-211 T 22-04-2016 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 Pfam PF07687 Peptidase dimerisation domain 200 291 1.8E-5 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PANTHER PTHR11014 330 486 5.0E-211 T 22-04-2016 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PIRSF PIRSF016599 1 485 9.0E-212 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PANTHER PTHR11014 204 279 5.0E-211 T 22-04-2016 YPO3230 068264c18743bf51aeb26bc7dc3f6305 486 PANTHER PTHR11014 1 185 5.0E-211 T 22-04-2016 YPO2071 321117fb47ecc76686209582a8d8e7ad 634 Gene3D G3DSA:3.40.50.300 4 116 7.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2071 321117fb47ecc76686209582a8d8e7ad 634 Gene3D G3DSA:3.40.50.300 190 234 7.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2071 321117fb47ecc76686209582a8d8e7ad 634 Pfam PF13307 Helicase C-terminal domain 459 616 2.2E-34 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YPO2071 321117fb47ecc76686209582a8d8e7ad 634 PANTHER PTHR11472 15 621 2.6E-244 T 22-04-2016 YPO2071 321117fb47ecc76686209582a8d8e7ad 634 Pfam PF06733 DEAD_2 181 247 5.6E-5 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 YPO2071 321117fb47ecc76686209582a8d8e7ad 634 Gene3D G3DSA:3.40.50.300 450 599 2.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2071 321117fb47ecc76686209582a8d8e7ad 634 SMART SM00491 474 603 2.4E-54 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YPO2071 321117fb47ecc76686209582a8d8e7ad 634 Pfam PF00270 DEAD/DEAH box helicase 30 82 1.7E-4 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO2071 321117fb47ecc76686209582a8d8e7ad 634 SMART SM00487 16 342 0.0018 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO2071 321117fb47ecc76686209582a8d8e7ad 634 SUPERFAMILY SSF52540 573 598 7.41E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2071 321117fb47ecc76686209582a8d8e7ad 634 SUPERFAMILY SSF52540 40 88 7.41E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2071 321117fb47ecc76686209582a8d8e7ad 634 SUPERFAMILY SSF52540 477 542 7.41E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2071 321117fb47ecc76686209582a8d8e7ad 634 PANTHER PTHR11472:SF37 15 621 2.6E-244 T 22-04-2016 YPO2071 321117fb47ecc76686209582a8d8e7ad 634 SUPERFAMILY SSF52540 13 232 4.08E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0778 91200cb885159446a6d40363790ca5cc 2201 Pfam PF08415 Nonribosomal peptide synthase 597 649 8.4E-13 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPO0778 91200cb885159446a6d40363790ca5cc 2201 Pfam PF08415 Nonribosomal peptide synthase 2036 2091 1.2E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YPO0778 91200cb885159446a6d40363790ca5cc 2201 Gene3D G3DSA:3.40.50.980 891 1045 2.4E-34 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 758 1166 1.3E-115 T 22-04-2016 IPR010071 Amino acid adenylation domain YPO0778 91200cb885159446a6d40363790ca5cc 2201 Pfam PF00550 Phosphopantetheine attachment site 186 249 4.2E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0778 91200cb885159446a6d40363790ca5cc 2201 Pfam PF00550 Phosphopantetheine attachment site 1618 1677 8.5E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0778 91200cb885159446a6d40363790ca5cc 2201 PANTHER PTHR24096 1544 1619 0.0 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 PANTHER PTHR24096 641 1210 0.0 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 SUPERFAMILY SSF52777 460 699 4.22E-38 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 Gene3D G3DSA:3.30.300.30 1533 1617 4.3E-26 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 Gene3D G3DSA:3.30.300.30 1138 1190 4.3E-26 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1638 1653 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPO0778 91200cb885159446a6d40363790ca5cc 2201 SUPERFAMILY SSF52777 1753 1910 8.45E-24 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 SUPERFAMILY SSF52777 285 455 5.0E-19 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 Gene3D G3DSA:1.10.1200.10 1618 1683 1.2E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0778 91200cb885159446a6d40363790ca5cc 2201 Gene3D G3DSA:1.10.1200.10 187 250 3.6E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0778 91200cb885159446a6d40363790ca5cc 2201 Pfam PF00668 Condensation domain 282 574 2.9E-34 T 22-04-2016 IPR001242 Condensation domain YPO0778 91200cb885159446a6d40363790ca5cc 2201 Pfam PF00668 Condensation domain 1749 2011 1.4E-38 T 22-04-2016 IPR001242 Condensation domain YPO0778 91200cb885159446a6d40363790ca5cc 2201 Gene3D G3DSA:2.30.38.10 1056 1132 4.9E-21 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 SUPERFAMILY SSF47336 184 294 1.7E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0778 91200cb885159446a6d40363790ca5cc 2201 PANTHER PTHR24096:SF247 1544 1619 0.0 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 SUPERFAMILY SSF47336 1611 1679 1.7E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO0778 91200cb885159446a6d40363790ca5cc 2201 PANTHER PTHR24096:SF247 641 1210 0.0 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 ProSitePatterns PS00455 Putative AMP-binding domain signature. 885 896 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO0778 91200cb885159446a6d40363790ca5cc 2201 Gene3D G3DSA:3.40.50.980 730 890 3.0E-35 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 Pfam PF00501 AMP-binding enzyme 737 1141 1.7E-85 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO0778 91200cb885159446a6d40363790ca5cc 2201 SUPERFAMILY SSF56801 1528 1627 1.44E-124 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 SUPERFAMILY SSF56801 704 1194 1.44E-124 T 22-04-2016 YPO0778 91200cb885159446a6d40363790ca5cc 2201 SUPERFAMILY SSF52777 1900 2141 2.67E-45 T 22-04-2016 YPO2878 767267d63445c786cf3887af6af4e90a 424 PIRSF PIRSF001549 2 421 4.2E-125 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 YPO2878 767267d63445c786cf3887af6af4e90a 424 PANTHER PTHR11476:SF9 2 424 8.7E-239 T 22-04-2016 YPO2878 767267d63445c786cf3887af6af4e90a 424 Pfam PF03129 Anticodon binding domain 331 418 1.3E-9 T 22-04-2016 IPR004154 Anticodon-binding YPO2878 767267d63445c786cf3887af6af4e90a 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.069 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 YPO2878 767267d63445c786cf3887af6af4e90a 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.2E-45 T 22-04-2016 YPO2878 767267d63445c786cf3887af6af4e90a 424 PANTHER PTHR11476 2 424 8.7E-239 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 YPO2878 767267d63445c786cf3887af6af4e90a 424 SUPERFAMILY SSF52954 327 419 2.29E-23 T 22-04-2016 IPR004154 Anticodon-binding YPO2878 767267d63445c786cf3887af6af4e90a 424 Gene3D G3DSA:3.40.50.800 327 420 6.1E-30 T 22-04-2016 IPR004154 Anticodon-binding YPO2878 767267d63445c786cf3887af6af4e90a 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 4.6E-155 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 YPO2878 767267d63445c786cf3887af6af4e90a 424 SUPERFAMILY SSF55681 5 320 1.26E-105 T 22-04-2016 YPO2878 767267d63445c786cf3887af6af4e90a 424 Gene3D G3DSA:3.30.930.10 4 185 1.1E-99 T 22-04-2016 YPO2878 767267d63445c786cf3887af6af4e90a 424 Gene3D G3DSA:3.30.930.10 221 320 1.1E-99 T 22-04-2016 YPO2129 30e326432b46bfae6d5c75a50eb48c27 206 Pfam PF06805 Bacteriophage lambda tail assembly protein I 11 93 5.0E-11 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I YPO1566 fde287051a8394387355adb9ad41c2de 280 PANTHER PTHR11820:SF71 1 278 2.6E-185 T 22-04-2016 YPO1566 fde287051a8394387355adb9ad41c2de 280 PANTHER PTHR11820 1 278 2.6E-185 T 22-04-2016 YPO1566 fde287051a8394387355adb9ad41c2de 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 275 2.0E-65 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1566 fde287051a8394387355adb9ad41c2de 280 Gene3D G3DSA:3.90.850.10 66 276 5.5E-85 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1566 fde287051a8394387355adb9ad41c2de 280 SUPERFAMILY SSF56529 62 277 2.22E-79 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 PANTHER PTHR10314:SF4 74 131 4.1E-30 T 22-04-2016 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 PANTHER PTHR10314:SF4 18 51 4.1E-30 T 22-04-2016 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 PANTHER PTHR10314 74 131 4.1E-30 T 22-04-2016 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 PANTHER PTHR10314 18 51 4.1E-30 T 22-04-2016 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 SUPERFAMILY SSF51366 1 266 9.42E-92 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 Gene3D G3DSA:3.20.20.70 1 267 4.8E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.8E-102 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.479 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPO2203 a6dd32fe7bedb65fbd1cb7ab8eac66fa 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 8.7E-96 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YPO0296 f9ca76374e7fdf73b4196af1f549148e 151 Pfam PF05099 Tellurite resistance protein TerB 15 150 3.4E-24 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal YPO0296 f9ca76374e7fdf73b4196af1f549148e 151 SUPERFAMILY SSF158682 23 150 8.5E-17 T 22-04-2016 IPR029024 TerB-like YPO0296 f9ca76374e7fdf73b4196af1f549148e 151 Gene3D G3DSA:1.10.3680.10 21 150 5.6E-19 T 22-04-2016 IPR029024 TerB-like YPO1517 b05f63713b2f196a4a85ab830d103239 363 Gene3D G3DSA:3.40.50.2300 42 167 3.8E-19 T 22-04-2016 YPO1517 b05f63713b2f196a4a85ab830d103239 363 SUPERFAMILY SSF53822 45 310 1.61E-38 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO1517 b05f63713b2f196a4a85ab830d103239 363 Pfam PF13407 Periplasmic binding protein domain 60 306 8.9E-26 T 22-04-2016 IPR025997 Periplasmic binding protein YPO1517 b05f63713b2f196a4a85ab830d103239 363 Gene3D G3DSA:3.40.50.2300 168 299 3.0E-16 T 22-04-2016 YPO3980 e58fcfe488fca91ab536ac6060967121 378 PANTHER PTHR21599 1 377 2.2E-275 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPO3980 e58fcfe488fca91ab536ac6060967121 378 Gene3D G3DSA:3.90.1510.10 42 275 1.8E-99 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 YPO3980 e58fcfe488fca91ab536ac6060967121 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 2.1E-166 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPO3980 e58fcfe488fca91ab536ac6060967121 378 PIRSF PIRSF006078 1 377 7.6E-143 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPO3980 e58fcfe488fca91ab536ac6060967121 378 Pfam PF02595 Glycerate kinase family 3 374 1.1E-152 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPO3980 e58fcfe488fca91ab536ac6060967121 378 PANTHER PTHR21599:SF4 1 377 2.2E-275 T 22-04-2016 YPO3980 e58fcfe488fca91ab536ac6060967121 378 SUPERFAMILY SSF110738 1 376 1.57E-146 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YPO2450 1bdcb837152ffa6dda53e60c21580649 352 PANTHER PTHR21716:SF18 1 350 5.0E-245 T 22-04-2016 YPO2450 1bdcb837152ffa6dda53e60c21580649 352 PANTHER PTHR21716 1 350 5.0E-245 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPO2450 1bdcb837152ffa6dda53e60c21580649 352 Pfam PF01594 Domain of unknown function DUF20 14 327 4.6E-71 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 144 158 2.1E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 72 81 2.1E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 132 144 2.1E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 262 272 2.1E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 2.1E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 194 206 2.1E-31 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 201 216 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PANTHER PTHR30587:SF0 42 274 1.6E-122 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 76 272 1.4E-92 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PANTHER PTHR30587 42 274 1.6E-122 T 22-04-2016 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 249 261 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 222 243 4.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 93 113 4.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 74 93 4.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 113 132 4.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 221 4.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 246 271 4.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO1820 3c565f6ea2ca284ab394824398b4ecbf 274 Pfam PF00813 FliP family 77 268 5.1E-77 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO3726 90a79dde1570a37d36a64a44f1f12041 532 Gene3D G3DSA:1.20.1220.12 413 525 8.2E-38 T 22-04-2016 YPO3726 90a79dde1570a37d36a64a44f1f12041 532 PANTHER PTHR21631 1 531 4.1E-276 T 22-04-2016 YPO3726 90a79dde1570a37d36a64a44f1f12041 532 PANTHER PTHR21631:SF1 1 531 4.1E-276 T 22-04-2016 YPO3726 90a79dde1570a37d36a64a44f1f12041 532 Pfam PF01274 Malate synthase 12 531 3.5E-204 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YPO3726 90a79dde1570a37d36a64a44f1f12041 532 PIRSF PIRSF001363 2 532 3.2E-249 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YPO3726 90a79dde1570a37d36a64a44f1f12041 532 Gene3D G3DSA:3.20.20.360 72 412 4.8E-125 T 22-04-2016 YPO3726 90a79dde1570a37d36a64a44f1f12041 532 SUPERFAMILY SSF51645 11 531 7.46E-188 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YPO3726 90a79dde1570a37d36a64a44f1f12041 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 3.0E-251 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YPO3689 bc9797fba1686190f02d4a7d197e53b7 152 SUPERFAMILY SSF53933 45 151 2.04E-38 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 YPO3689 bc9797fba1686190f02d4a7d197e53b7 152 PRINTS PR00117 Barnase signature 89 107 4.2E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPO3689 bc9797fba1686190f02d4a7d197e53b7 152 PRINTS PR00117 Barnase signature 132 150 4.2E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPO3689 bc9797fba1686190f02d4a7d197e53b7 152 PRINTS PR00117 Barnase signature 110 129 4.2E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPO3689 bc9797fba1686190f02d4a7d197e53b7 152 PRINTS PR00117 Barnase signature 49 66 4.2E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPO3689 bc9797fba1686190f02d4a7d197e53b7 152 PRINTS PR00117 Barnase signature 69 86 4.2E-31 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPO3689 bc9797fba1686190f02d4a7d197e53b7 152 PIRSF PIRSF001013 1 152 3.1E-70 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YPO3689 bc9797fba1686190f02d4a7d197e53b7 152 Pfam PF00545 ribonuclease 62 149 1.2E-24 T 22-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 YPO3689 bc9797fba1686190f02d4a7d197e53b7 152 Gene3D G3DSA:3.10.450.30 45 152 6.5E-45 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 YPO1134 ffdf24df3dad296082afff719d388ab6 111 Pfam PF07769 psiF repeat 33 65 5.4E-16 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat YPO1134 ffdf24df3dad296082afff719d388ab6 111 Pfam PF07769 psiF repeat 76 108 6.7E-19 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat YPO2676 62b0053046094cc4a15e79586c3cc54d 134 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.344 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPO2676 62b0053046094cc4a15e79586c3cc54d 134 PANTHER PTHR28259 5 132 1.2E-42 T 22-04-2016 YPO2676 62b0053046094cc4a15e79586c3cc54d 134 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 9.3E-19 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPO4018 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 SUPERFAMILY SSF53686 5 302 4.85E-66 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO4018 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 PANTHER PTHR10314 3 301 1.6E-111 T 22-04-2016 YPO4018 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 291 6.6E-60 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO4018 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 PANTHER PTHR10314:SF8 3 301 1.6E-111 T 22-04-2016 YPO4018 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 Gene3D G3DSA:3.40.50.1100 144 301 3.4E-43 T 22-04-2016 YPO4018 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 Gene3D G3DSA:3.40.50.1100 5 36 3.4E-43 T 22-04-2016 YPO4018 6d5acdb3d5f1cd2df0cfd3bf3f2b58ff 314 Gene3D G3DSA:3.40.50.1100 37 138 4.3E-27 T 22-04-2016 YPO3425 a5fcdf846efa77e019f9562c4638bcf0 154 PANTHER PTHR30093 1 82 1.8E-23 T 22-04-2016 YPO3425 a5fcdf846efa77e019f9562c4638bcf0 154 PANTHER PTHR30093 115 126 1.8E-23 T 22-04-2016 YPO3425 a5fcdf846efa77e019f9562c4638bcf0 154 SUPERFAMILY SSF54523 34 144 9.94E-23 T 22-04-2016 YPO3425 a5fcdf846efa77e019f9562c4638bcf0 154 Pfam PF13633 Prokaryotic N-terminal methylation site 10 36 6.6E-12 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO3425 a5fcdf846efa77e019f9562c4638bcf0 154 Gene3D G3DSA:3.30.700.10 13 144 3.4E-31 T 22-04-2016 YPO3425 a5fcdf846efa77e019f9562c4638bcf0 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 9.1E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO3425 a5fcdf846efa77e019f9562c4638bcf0 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO3883 ebfb2d7468f9b57af794e18cf5a37ac9 85 Gene3D G3DSA:1.10.1200.20 1 85 8.6E-39 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPO3883 ebfb2d7468f9b57af794e18cf5a37ac9 85 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 4 84 1.6E-39 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPO3883 ebfb2d7468f9b57af794e18cf5a37ac9 85 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 63 84 1.3E-24 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPO3883 ebfb2d7468f9b57af794e18cf5a37ac9 85 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 4 22 1.3E-24 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPO3883 ebfb2d7468f9b57af794e18cf5a37ac9 85 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 40 56 1.3E-24 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPO3883 ebfb2d7468f9b57af794e18cf5a37ac9 85 SUPERFAMILY SSF47345 1 85 2.35E-37 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPO3883 ebfb2d7468f9b57af794e18cf5a37ac9 85 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 9 84 4.0E-40 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 YPO3657a 090875b31b9f68ca704d3d79328ba8dc 80 PANTHER PTHR39174:SF1 1 80 9.1E-40 T 22-04-2016 YPO3657a 090875b31b9f68ca704d3d79328ba8dc 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 3.2E-30 T 22-04-2016 IPR010398 Protein of unknown function DUF997 YPO3657a 090875b31b9f68ca704d3d79328ba8dc 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 2.0E-39 T 22-04-2016 IPR010398 Protein of unknown function DUF997 YPO3657a 090875b31b9f68ca704d3d79328ba8dc 80 PANTHER PTHR39174 1 80 9.1E-40 T 22-04-2016 YPO3132 c3068fda8dc1e0af4926ffe0b3c9344b 395 SUPERFAMILY SSF111369 53 301 1.96E-86 T 22-04-2016 YPO3132 c3068fda8dc1e0af4926ffe0b3c9344b 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 377 9.8E-80 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO3132 c3068fda8dc1e0af4926ffe0b3c9344b 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 294 8.0E-10 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO3132 c3068fda8dc1e0af4926ffe0b3c9344b 395 Pfam PF00529 HlyD membrane-fusion protein of T1SS 81 361 5.7E-11 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO3132 c3068fda8dc1e0af4926ffe0b3c9344b 395 PANTHER PTHR30158 1 386 4.3E-203 T 22-04-2016 YPO3132 c3068fda8dc1e0af4926ffe0b3c9344b 395 Gene3D G3DSA:2.40.50.100 66 99 8.7E-23 T 22-04-2016 YPO3132 c3068fda8dc1e0af4926ffe0b3c9344b 395 Gene3D G3DSA:2.40.50.100 174 209 8.7E-23 T 22-04-2016 YPO3132 c3068fda8dc1e0af4926ffe0b3c9344b 395 PANTHER PTHR30158:SF3 1 386 4.3E-203 T 22-04-2016 YPO2318 5aa72463a49b4da314571848118ebaab 94 ProDom PD580032 SHOCK ACID PRECURSOR SIGNAL 3D-STRUCTURE RESPONSE STRESS SECRETED 1 93 1.0E-19 T 22-04-2016 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 SUPERFAMILY SSF51735 1 112 1.5E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 SUPERFAMILY SSF53790 212 457 1.7E-79 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Pfam PF10414 Sirohaem synthase dimerisation region 150 205 8.5E-17 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Gene3D G3DSA:3.30.160.110 113 148 1.5E-19 T 22-04-2016 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 215 424 4.4E-49 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 213 445 2.7E-91 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 293 326 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Gene3D G3DSA:3.30.950.10 329 455 4.4E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 SUPERFAMILY SSF75615 114 200 8.76E-24 T 22-04-2016 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 PANTHER PTHR21091:SF16 162 439 1.7E-83 T 22-04-2016 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 PANTHER PTHR21091 162 439 1.7E-83 T 22-04-2016 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Gene3D G3DSA:3.40.1010.10 212 328 1.8E-45 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Pfam PF14824 Sirohaem biosynthesis protein central 121 145 1.1E-8 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 203 1.5E-66 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 218 232 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Hamap MF_01646 Siroheme synthase [cysG]. 1 454 50.178 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Gene3D G3DSA:3.40.50.720 1 112 5.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Pfam PF13241 Putative NAD(P)-binding 6 115 7.1E-24 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 PIRSF PIRSF036426 1 462 9.2E-199 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO0158 56a2494f60a64f7e549dcd2388d157a3 470 Gene3D G3DSA:1.10.8.210 150 208 6.1E-20 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO4114 90941fafa5978fb710eadef21efb7356 258 PANTHER PTHR24220 13 253 3.1E-199 T 22-04-2016 YPO4114 90941fafa5978fb710eadef21efb7356 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO4114 90941fafa5978fb710eadef21efb7356 258 Gene3D G3DSA:3.40.50.300 12 252 3.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4114 90941fafa5978fb710eadef21efb7356 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 4.0E-121 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 YPO4114 90941fafa5978fb710eadef21efb7356 258 Pfam PF00005 ABC transporter 27 182 2.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO4114 90941fafa5978fb710eadef21efb7356 258 PANTHER PTHR24220:SF560 13 253 3.1E-199 T 22-04-2016 YPO4114 90941fafa5978fb710eadef21efb7356 258 SUPERFAMILY SSF52540 11 245 4.73E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4114 90941fafa5978fb710eadef21efb7356 258 SMART SM00382 36 238 5.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3736 4c6dfded1dcbca040ba733cf7e955c7a 260 SUPERFAMILY SSF55811 79 241 2.94E-38 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO3736 4c6dfded1dcbca040ba733cf7e955c7a 260 SUPERFAMILY SSF55811 2 96 7.4E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO3736 4c6dfded1dcbca040ba733cf7e955c7a 260 Pfam PF00293 NUDIX domain 131 234 1.4E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO3736 4c6dfded1dcbca040ba733cf7e955c7a 260 PANTHER PTHR22769:SF7 85 254 1.5E-53 T 22-04-2016 YPO3736 4c6dfded1dcbca040ba733cf7e955c7a 260 PANTHER PTHR22769 85 254 1.5E-53 T 22-04-2016 YPO3736 4c6dfded1dcbca040ba733cf7e955c7a 260 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.3E-9 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 YPO3736 4c6dfded1dcbca040ba733cf7e955c7a 260 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPO3736 4c6dfded1dcbca040ba733cf7e955c7a 260 Gene3D G3DSA:3.90.79.10 93 244 4.1E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO3736 4c6dfded1dcbca040ba733cf7e955c7a 260 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 44.711 T 22-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 Gene3D G3DSA:3.30.9.10 173 219 3.6E-4 T 22-04-2016 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 3.7E-19 T 22-04-2016 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.7E-19 T 22-04-2016 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 3.7E-19 T 22-04-2016 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 3.7E-19 T 22-04-2016 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 Gene3D G3DSA:3.50.50.60 272 360 1.7E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 Gene3D G3DSA:3.50.50.60 3 172 1.7E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 Pfam PF01494 FAD binding domain 5 349 1.4E-29 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 394 2.8E-140 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 PANTHER PTHR13789 1 404 1.0E-187 T 22-04-2016 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 SUPERFAMILY SSF51905 271 388 1.53E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 SUPERFAMILY SSF51905 4 180 1.53E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0908 a2d0648fa7fccb8eda08931b8d7fe019 406 PANTHER PTHR13789:SF5 1 404 1.0E-187 T 22-04-2016 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 SUPERFAMILY SSF47917 383 511 1.36E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Gene3D G3DSA:2.40.30.20 1 93 8.2E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 3.2E-13 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Gene3D G3DSA:1.20.150.20 383 510 8.9E-49 T 22-04-2016 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.1E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 SUPERFAMILY SSF52540 96 381 1.32E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.3E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Gene3D G3DSA:3.40.50.300 94 382 3.2E-115 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.111 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 6.2E-261 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 PANTHER PTHR15184:SF3 1 496 4.0E-295 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO4123 edbe09ab3a2d3fd2e928c9ae7c2f1ffb 513 PANTHER PTHR15184 1 496 4.0E-295 T 22-04-2016 YPO1365 0f067b535f81dc351886a6b81d5d362c 649 Gene3D G3DSA:3.40.50.300 3 224 1.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1365 0f067b535f81dc351886a6b81d5d362c 649 Pfam PF02687 FtsX-like permease family 528 642 3.2E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPO1365 0f067b535f81dc351886a6b81d5d362c 649 Pfam PF12704 MacB-like periplasmic core domain 273 491 2.3E-36 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPO1365 0f067b535f81dc351886a6b81d5d362c 649 PANTHER PTHR24220 6 232 1.7E-102 T 22-04-2016 YPO1365 0f067b535f81dc351886a6b81d5d362c 649 Pfam PF00005 ABC transporter 24 172 1.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1365 0f067b535f81dc351886a6b81d5d362c 649 SUPERFAMILY SSF52540 4 225 2.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1365 0f067b535f81dc351886a6b81d5d362c 649 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1365 0f067b535f81dc351886a6b81d5d362c 649 PANTHER PTHR24220:SF86 6 232 1.7E-102 T 22-04-2016 YPO1365 0f067b535f81dc351886a6b81d5d362c 649 SMART SM00382 33 220 2.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1488 93dfabd59c9309ae1cd9af84bad362c7 150 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 7 116 6.8E-24 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein YPO1488 93dfabd59c9309ae1cd9af84bad362c7 150 SUPERFAMILY SSF160719 33 120 8.11E-17 T 22-04-2016 YPO1488 93dfabd59c9309ae1cd9af84bad362c7 150 Gene3D G3DSA:3.10.450.40 35 117 6.2E-9 T 22-04-2016 YPO1488 93dfabd59c9309ae1cd9af84bad362c7 150 Pfam PF04965 Gene 25-like lysozyme 35 116 3.6E-9 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO0977 686fdee099bafac0402127901208d0a5 514 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 93 510 4.2E-168 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO0977 686fdee099bafac0402127901208d0a5 514 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 50 510 1.3E-201 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO0977 686fdee099bafac0402127901208d0a5 514 PANTHER PTHR35565 64 514 0.0 T 22-04-2016 YPO0977 686fdee099bafac0402127901208d0a5 514 PANTHER PTHR35565 3 46 0.0 T 22-04-2016 YPO0977 686fdee099bafac0402127901208d0a5 514 PANTHER PTHR35565:SF1 64 514 0.0 T 22-04-2016 YPO0977 686fdee099bafac0402127901208d0a5 514 PANTHER PTHR35565:SF1 3 46 0.0 T 22-04-2016 YPO4024 63f443901deecedbae5bf405f220b113 335 SUPERFAMILY SSF81345 26 331 1.44E-43 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO4024 63f443901deecedbae5bf405f220b113 335 PANTHER PTHR30472 30 335 7.0E-128 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO4024 63f443901deecedbae5bf405f220b113 335 Gene3D G3DSA:1.10.3470.10 51 332 6.1E-43 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO4024 63f443901deecedbae5bf405f220b113 335 Pfam PF01032 FecCD transport family 49 331 1.8E-42 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO4024 63f443901deecedbae5bf405f220b113 335 PANTHER PTHR30472:SF19 30 335 7.0E-128 T 22-04-2016 YPO3768 a345349a30e122110b05688a7a283684 233 PANTHER PTHR19370 4 233 1.6E-127 T 22-04-2016 YPO3768 a345349a30e122110b05688a7a283684 233 PANTHER PTHR19370:SF119 4 233 1.6E-127 T 22-04-2016 YPO3768 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3768 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3768 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3768 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3768 a345349a30e122110b05688a7a283684 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 2.4E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO3768 a345349a30e122110b05688a7a283684 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 4.8E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPO3768 a345349a30e122110b05688a7a283684 233 SUPERFAMILY SSF63380 3 97 1.47E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO3768 a345349a30e122110b05688a7a283684 233 Gene3D G3DSA:2.40.30.10 3 97 9.0E-29 T 22-04-2016 YPO3768 a345349a30e122110b05688a7a283684 233 SUPERFAMILY SSF52343 100 231 1.83E-34 T 22-04-2016 YPO3768 a345349a30e122110b05688a7a283684 233 Gene3D G3DSA:3.40.50.80 101 231 6.2E-37 T 22-04-2016 YPO3768 a345349a30e122110b05688a7a283684 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 1.9E-21 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PANTHER PTHR30177:SF8 89 384 3.9E-194 T 22-04-2016 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 375 2.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 Gene3D G3DSA:1.10.3720.10 41 65 3.9E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 Gene3D G3DSA:1.10.3720.10 159 375 3.9E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 SUPERFAMILY SSF161098 173 371 2.49E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PANTHER PTHR30177 89 384 3.9E-194 T 22-04-2016 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 2.6E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PRINTS PR00173 Glutamate-aspartate symporter signature 319 338 2.6E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 2.6E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO1197 4dd2c98324a18d1ba2ff969e9ddbfaf3 384 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 2.6E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0548 ae08b8903dfa75169799b847bc7ab2df 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 7.2E-28 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 YPO0548 ae08b8903dfa75169799b847bc7ab2df 105 PANTHER PTHR37479 1 105 7.7E-40 T 22-04-2016 YPO0548 ae08b8903dfa75169799b847bc7ab2df 105 PANTHER PTHR37479:SF1 1 105 7.7E-40 T 22-04-2016 YPO0548 ae08b8903dfa75169799b847bc7ab2df 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.785 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 YPO0548 ae08b8903dfa75169799b847bc7ab2df 105 Pfam PF04999 Cell division protein FtsL 11 104 4.9E-34 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PANTHER PTHR32176:SF0 4 438 4.2E-268 T 22-04-2016 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 1.4E-215 T 22-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.638 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 SUPERFAMILY SSF51658 4 438 1.6E-173 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 133 153 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 156 175 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 271 298 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 180 201 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 92 114 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 229 253 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 207 226 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 333 344 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PRINTS PR00688 Xylose isomerase signature 300 311 9.2E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 Gene3D G3DSA:3.20.20.150 3 439 8.9E-211 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO4038 583b3c09d4cc9dbedf610ff3cf10e464 439 PANTHER PTHR32176 4 438 4.2E-268 T 22-04-2016 YPO2477 494a4e9776c0d38ff895e73b2d9dd8b7 428 SUPERFAMILY SSF53850 22 427 1.03E-61 T 22-04-2016 YPO2477 494a4e9776c0d38ff895e73b2d9dd8b7 428 PANTHER PTHR30061:SF18 1 427 1.3E-268 T 22-04-2016 YPO2477 494a4e9776c0d38ff895e73b2d9dd8b7 428 Pfam PF13416 Bacterial extracellular solute-binding protein 56 364 2.7E-34 T 22-04-2016 YPO2477 494a4e9776c0d38ff895e73b2d9dd8b7 428 PANTHER PTHR30061 1 427 1.3E-268 T 22-04-2016 YPO2477 494a4e9776c0d38ff895e73b2d9dd8b7 428 Gene3D G3DSA:3.40.190.10 154 359 4.0E-32 T 22-04-2016 YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 SUPERFAMILY SSF52540 4 642 3.38E-181 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 PANTHER PTHR11070:SF7 4 718 1.3E-256 T 22-04-2016 YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 286 387 3.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 552 642 3.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 191 285 2.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:3.40.50.300 4 110 2.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:1.10.10.160 114 190 3.9E-25 T 22-04-2016 IPR013986 DExx box DNA helicase domain YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 PANTHER PTHR11070 4 718 1.3E-256 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.3E-73 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 2.1E-75 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YPO3841 df91f13b79df68f5e6165ff0b8904e37 720 Gene3D G3DSA:1.10.486.10 388 541 5.9E-50 T 22-04-2016 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 PIRSF PIRSF005900 8 167 3.6E-41 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 44.955 T 22-04-2016 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 Pfam PF00210 Ferritin-like domain 30 166 3.0E-21 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 SUPERFAMILY SSF47240 10 167 1.13E-46 T 22-04-2016 IPR009078 Ferritin-like superfamily YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 PANTHER PTHR30295:SF4 9 167 1.6E-99 T 22-04-2016 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.4E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.4E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.4E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 PANTHER PTHR30295 9 167 1.6E-99 T 22-04-2016 YPO2510 7ee279ec2c2abccee0c5121e9c47037a 167 Gene3D G3DSA:1.20.1260.10 2 167 1.5E-50 T 22-04-2016 IPR012347 Ferritin-related YPO1934 aed13abf9056a07fa860f5501295086e 320 Pfam PF03466 LysR substrate binding domain 86 283 5.9E-41 T 22-04-2016 IPR005119 LysR, substrate-binding YPO1934 aed13abf9056a07fa860f5501295086e 320 Gene3D G3DSA:3.40.190.10 196 260 6.7E-9 T 22-04-2016 YPO1934 aed13abf9056a07fa860f5501295086e 320 Gene3D G3DSA:3.40.190.10 87 195 7.2E-13 T 22-04-2016 YPO1934 aed13abf9056a07fa860f5501295086e 320 PANTHER PTHR30126 1 307 6.0E-188 T 22-04-2016 YPO1934 aed13abf9056a07fa860f5501295086e 320 PANTHER PTHR30126:SF33 1 307 6.0E-188 T 22-04-2016 YPO1934 aed13abf9056a07fa860f5501295086e 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.7E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1934 aed13abf9056a07fa860f5501295086e 320 SUPERFAMILY SSF46785 1 83 3.93E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1934 aed13abf9056a07fa860f5501295086e 320 SUPERFAMILY SSF53850 86 287 5.25E-31 T 22-04-2016 YPO1934 aed13abf9056a07fa860f5501295086e 320 Gene3D G3DSA:1.10.10.10 1 83 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0211 3476b68d211c1d01328d01318d8bbe2d 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 4.0E-64 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 YPO0211 3476b68d211c1d01328d01318d8bbe2d 201 Gene3D G3DSA:3.40.1370.10 54 201 3.3E-59 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 YPO0211 3476b68d211c1d01328d01318d8bbe2d 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 4 201 33.968 T 22-04-2016 IPR013005 50S ribosomal protein uL4 YPO0211 3476b68d211c1d01328d01318d8bbe2d 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.7E-74 T 22-04-2016 IPR013005 50S ribosomal protein uL4 YPO0211 3476b68d211c1d01328d01318d8bbe2d 201 SUPERFAMILY SSF52166 10 200 7.06E-73 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 YPO0211 3476b68d211c1d01328d01318d8bbe2d 201 PANTHER PTHR10746 7 200 1.7E-95 T 22-04-2016 IPR013005 50S ribosomal protein uL4 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 Gene3D G3DSA:3.40.50.1360 78 223 6.6E-13 T 22-04-2016 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 Gene3D G3DSA:1.10.10.10 2 61 2.8E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 SUPERFAMILY SSF46785 6 65 3.96E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 SMART SM00420 8 60 7.8E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 SUPERFAMILY SSF100950 76 236 6.51E-26 T 22-04-2016 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 PANTHER PTHR30363:SF5 2 271 1.4E-182 T 22-04-2016 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 Pfam PF08220 DeoR-like helix-turn-helix domain 8 62 1.1E-11 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 Pfam PF00455 DeoR C terminal sensor domain 77 236 9.8E-49 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 PANTHER PTHR30363 2 271 1.4E-182 T 22-04-2016 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 SMART SM01134 75 238 3.1E-61 T 22-04-2016 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 2.8E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1237 8b44447843f3eb4cc9a340fa107f0dcf 271 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 2.8E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO0496 acc43bccb901043231e2a9cd26919191 277 Pfam PF00226 DnaJ domain 214 273 2.0E-9 T 22-04-2016 IPR001623 DnaJ domain YPO0496 acc43bccb901043231e2a9cd26919191 277 Gene3D G3DSA:1.10.287.110 215 273 1.4E-12 T 22-04-2016 IPR001623 DnaJ domain YPO0496 acc43bccb901043231e2a9cd26919191 277 SMART SM00271 210 275 3.4E-15 T 22-04-2016 IPR001623 DnaJ domain YPO0496 acc43bccb901043231e2a9cd26919191 277 SUPERFAMILY SSF46565 132 273 5.75E-28 T 22-04-2016 IPR001623 DnaJ domain YPO0496 acc43bccb901043231e2a9cd26919191 277 PRINTS PR00625 DnaJ domain signature 255 275 2.8E-6 T 22-04-2016 IPR001623 DnaJ domain YPO0496 acc43bccb901043231e2a9cd26919191 277 PRINTS PR00625 DnaJ domain signature 213 231 2.8E-6 T 22-04-2016 IPR001623 DnaJ domain YPO0496 acc43bccb901043231e2a9cd26919191 277 PRINTS PR00625 DnaJ domain signature 231 246 2.8E-6 T 22-04-2016 IPR001623 DnaJ domain YPO0496 acc43bccb901043231e2a9cd26919191 277 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 277 43.277 T 22-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 YPO0496 acc43bccb901043231e2a9cd26919191 277 Pfam PF05099 Tellurite resistance protein TerB 44 171 5.5E-12 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal YPO0496 acc43bccb901043231e2a9cd26919191 277 Gene3D G3DSA:1.10.3680.10 21 214 3.3E-30 T 22-04-2016 IPR029024 TerB-like YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 PANTHER PTHR32089 267 613 1.5E-228 T 22-04-2016 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 SMART SM00304 310 362 1.4E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 PANTHER PTHR32089:SF35 267 613 1.5E-228 T 22-04-2016 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 Gene3D G3DSA:1.10.287.950 378 582 1.7E-62 T 22-04-2016 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 Pfam PF16591 Helical bimodular sensor domain 57 282 8.8E-14 T 22-04-2016 IPR032255 Helical bimodular sensor domain YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 SMART SM00283 363 610 1.7E-87 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 609 1.9E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 SUPERFAMILY SSF58104 330 611 1.7E-74 T 22-04-2016 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 3.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 488 3.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 3.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 538 567 3.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 SMART SM01358 39 288 3.1E-45 T 22-04-2016 IPR032255 Helical bimodular sensor domain YPO4062 0e771fc2694be7b928a235bfbe3d6021 649 Pfam PF00672 HAMP domain 291 359 9.4E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO2566 ed14ca7944c267764464ac55d14eb261 400 Gene3D G3DSA:3.30.420.40 208 398 5.1E-75 T 22-04-2016 YPO2566 ed14ca7944c267764464ac55d14eb261 400 PANTHER PTHR21060:SF15 2 398 1.1E-283 T 22-04-2016 YPO2566 ed14ca7944c267764464ac55d14eb261 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 8.9E-184 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 Pfam PF00871 Acetokinase family 6 393 3.3E-175 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 Gene3D G3DSA:3.30.420.40 89 207 8.7E-9 T 22-04-2016 YPO2566 ed14ca7944c267764464ac55d14eb261 400 SUPERFAMILY SSF53067 160 398 6.11E-85 T 22-04-2016 YPO2566 ed14ca7944c267764464ac55d14eb261 400 SUPERFAMILY SSF53067 4 199 3.17E-63 T 22-04-2016 YPO2566 ed14ca7944c267764464ac55d14eb261 400 PRINTS PR00471 Acetate kinase family signature 325 341 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 PRINTS PR00471 Acetate kinase family signature 380 392 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 PRINTS PR00471 Acetate kinase family signature 206 227 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 PRINTS PR00471 Acetate kinase family signature 176 189 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 PRINTS PR00471 Acetate kinase family signature 6 17 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 PRINTS PR00471 Acetate kinase family signature 302 315 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 PANTHER PTHR21060 2 398 1.1E-283 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 188.838 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO2566 ed14ca7944c267764464ac55d14eb261 400 PIRSF PIRSF000722 2 400 1.5E-144 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 Pfam PF05860 haemagglutination activity domain 47 167 9.2E-29 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 Gene3D G3DSA:2.160.20.10 46 334 5.1E-75 T 22-04-2016 IPR012334 Pectin lyase fold YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 66 156 1.1E-16 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 SUPERFAMILY SSF51126 48 330 1.22E-54 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 PANTHER PTHR32093 1 513 1.5E-138 T 22-04-2016 YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 PANTHER PTHR32093 1433 1438 1.5E-138 T 22-04-2016 YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 PANTHER PTHR32093:SF21 1 513 1.5E-138 T 22-04-2016 YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 PANTHER PTHR32093:SF21 1433 1438 1.5E-138 T 22-04-2016 YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 SMART SM00912 48 168 4.2E-43 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 Pfam PF13332 Haemagluttinin repeat 1233 1406 4.3E-33 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 Pfam PF13332 Haemagluttinin repeat 411 470 1.2E-5 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 Pfam PF13332 Haemagluttinin repeat 639 798 4.3E-18 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 Pfam PF13332 Haemagluttinin repeat 488 557 0.0065 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 Pfam PF13332 Haemagluttinin repeat 819 906 3.0E-5 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO3721 ccbbc4b4aff5dabab9ffa811bc8fa87b 1635 Pfam PF13332 Haemagluttinin repeat 1035 1165 7.0E-12 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 71 798 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 PANTHER PTHR32282:SF11 187 814 1.7E-303 T 22-04-2016 YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 Gene3D G3DSA:1.10.3810.10 208 383 1.3E-62 T 22-04-2016 YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 Gene3D G3DSA:1.20.5.100 59 99 1.9E-23 T 22-04-2016 YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 SUPERFAMILY SSF53955 199 406 1.6E-65 T 22-04-2016 IPR023346 Lysozyme-like domain YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 PIRSF PIRSF002799 40 824 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 Pfam PF00912 Transglycosylase 212 383 4.9E-55 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 Pfam PF14814 Bifunctional transglycosylase second domain 116 200 1.2E-29 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 PANTHER PTHR32282 187 814 1.7E-303 T 22-04-2016 YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 SUPERFAMILY SSF56601 365 387 1.13E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 SUPERFAMILY SSF56601 415 780 1.13E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 81 7.4E-31 T 22-04-2016 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 Gene3D G3DSA:3.40.710.10 384 796 9.8E-106 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 Gene3D G3DSA:3.30.2060.10 114 203 7.2E-34 T 22-04-2016 YPO3393 94d2aef1a2df6d5a30ea2c25b63f2bd5 824 Pfam PF00905 Penicillin binding protein transpeptidase domain 476 716 5.4E-20 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPO3503 83666caa3e500841ab9d45a6f5eda363 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 2.8E-58 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 YPO3503 83666caa3e500841ab9d45a6f5eda363 209 PIRSF PIRSF005461 1 209 9.4E-82 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 YPO3503 83666caa3e500841ab9d45a6f5eda363 209 PANTHER PTHR10920:SF20 1 208 5.2E-143 T 22-04-2016 YPO3503 83666caa3e500841ab9d45a6f5eda363 209 PANTHER PTHR10920 1 208 5.2E-143 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 YPO3503 83666caa3e500841ab9d45a6f5eda363 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 1.8E-94 T 22-04-2016 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 YPO3503 83666caa3e500841ab9d45a6f5eda363 209 Gene3D G3DSA:3.40.50.150 1 208 3.0E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3503 83666caa3e500841ab9d45a6f5eda363 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 27.402 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 YPO3503 83666caa3e500841ab9d45a6f5eda363 209 SUPERFAMILY SSF53335 31 207 1.02E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2699 93965d6c7d19a642b52bc351940979ac 316 PANTHER PTHR18866 139 261 2.5E-49 T 22-04-2016 YPO2699 93965d6c7d19a642b52bc351940979ac 316 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 307 3.7E-119 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B YPO2699 93965d6c7d19a642b52bc351940979ac 316 Pfam PF02626 Allophanate hydrolase subunit 2 24 281 2.9E-90 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B YPO2699 93965d6c7d19a642b52bc351940979ac 316 SUPERFAMILY SSF50891 173 288 1.14E-11 T 22-04-2016 IPR029000 Cyclophilin-like domain YPO2699 93965d6c7d19a642b52bc351940979ac 316 SMART SM00797 23 298 3.6E-146 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B YPO2699 93965d6c7d19a642b52bc351940979ac 316 Gene3D G3DSA:2.40.100.10 174 295 4.4E-6 T 22-04-2016 IPR029000 Cyclophilin-like domain YPO0029 4d98f618e344e6e2f6fed8265cd6dc3e 145 SUPERFAMILY SSF69500 1 144 6.54E-56 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain YPO0029 4d98f618e344e6e2f6fed8265cd6dc3e 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 2.3E-51 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YPO0029 4d98f618e344e6e2f6fed8265cd6dc3e 145 Gene3D G3DSA:3.50.80.10 1 144 2.9E-56 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain YPO0029 4d98f618e344e6e2f6fed8265cd6dc3e 145 PANTHER PTHR10472 2 144 4.6E-76 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YPO0029 4d98f618e344e6e2f6fed8265cd6dc3e 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 4.6E-68 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YPO0029 4d98f618e344e6e2f6fed8265cd6dc3e 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.707 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 Gene3D G3DSA:3.30.190.20 161 225 2.8E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 Gene3D G3DSA:3.30.190.20 18 68 2.8E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 Gene3D G3DSA:3.40.50.790 69 159 1.9E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 PANTHER PTHR23105:SF5 21 229 2.1E-82 T 22-04-2016 YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 SUPERFAMILY SSF56808 6 225 1.83E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 PIRSF PIRSF002155 1 227 4.9E-78 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 PANTHER PTHR23105 21 229 2.1E-82 T 22-04-2016 YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.3E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 6.5E-107 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YPO3750 8938e3e805f49d50d98e34fe67ae0752 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.367 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YPO2286 7f122ba4f839be19e11032b0dbb112be 343 SUPERFAMILY SSF53850 44 278 2.29E-40 T 22-04-2016 YPO2286 7f122ba4f839be19e11032b0dbb112be 343 PANTHER PTHR30024 5 314 3.7E-58 T 22-04-2016 YPO2286 7f122ba4f839be19e11032b0dbb112be 343 Gene3D G3DSA:3.40.190.10 121 249 5.0E-24 T 22-04-2016 YPO2286 7f122ba4f839be19e11032b0dbb112be 343 PANTHER PTHR30024:SF1 5 314 3.7E-58 T 22-04-2016 YPO2286 7f122ba4f839be19e11032b0dbb112be 343 Pfam PF13379 NMT1-like family 56 268 5.5E-20 T 22-04-2016 YPO0104 bce5295627cbe080d10bc3c8610c3796 305 PANTHER PTHR13929:SF0 8 305 1.8E-96 T 22-04-2016 YPO0104 bce5295627cbe080d10bc3c8610c3796 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 8.7E-128 T 22-04-2016 YPO0104 bce5295627cbe080d10bc3c8610c3796 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.068 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YPO0104 bce5295627cbe080d10bc3c8610c3796 305 PIRSF PIRSF005355 2 305 4.2E-87 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 YPO0104 bce5295627cbe080d10bc3c8610c3796 305 PANTHER PTHR13929 8 305 1.8E-96 T 22-04-2016 YPO0104 bce5295627cbe080d10bc3c8610c3796 305 Pfam PF01040 UbiA prenyltransferase family 29 276 1.6E-36 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 SMART SM00382 44 232 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 SMART SM00382 293 488 5.1E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 Pfam PF00005 ABC transporter 286 439 5.0E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 Pfam PF00005 ABC transporter 35 184 2.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 Gene3D G3DSA:3.40.50.300 17 236 8.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 Gene3D G3DSA:3.40.50.300 285 503 9.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 PANTHER PTHR24220:SF516 21 393 1.0E-238 T 22-04-2016 YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 SUPERFAMILY SSF52540 283 497 5.62E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 SUPERFAMILY SSF52540 18 240 1.63E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2256 bf2e4acfd5b7621c48d58bc6f297f4ac 523 PANTHER PTHR24220 21 393 1.0E-238 T 22-04-2016 YPO3400 e024b149bb26f3771bcf266800ee09e6 159 SUPERFAMILY SSF55083 1 158 6.54E-55 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPO3400 e024b149bb26f3771bcf266800ee09e6 159 PANTHER PTHR20941 1 159 9.6E-80 T 22-04-2016 YPO3400 e024b149bb26f3771bcf266800ee09e6 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPO3400 e024b149bb26f3771bcf266800ee09e6 159 Gene3D G3DSA:3.30.70.560 3 155 5.9E-59 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPO3400 e024b149bb26f3771bcf266800ee09e6 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.4E-46 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPO3400 e024b149bb26f3771bcf266800ee09e6 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.1E-36 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPO0388 b2dee2a004ce34e19ba46657513afb42 438 PANTHER PTHR38733 2 433 1.2E-117 T 22-04-2016 YPO0388 b2dee2a004ce34e19ba46657513afb42 438 PANTHER PTHR38733:SF1 2 433 1.2E-117 T 22-04-2016 YPO0388 b2dee2a004ce34e19ba46657513afb42 438 Pfam PF10117 McrBC 5-methylcytosine restriction system component 65 388 1.2E-101 T 22-04-2016 IPR019292 5-methylcytosine restriction system component YPO0276 6fb6b3a514c8c8785e82d2d7248f6a40 328 SUPERFAMILY SSF46785 22 102 3.63E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0276 6fb6b3a514c8c8785e82d2d7248f6a40 328 SUPERFAMILY SSF53850 106 311 3.08E-37 T 22-04-2016 YPO0276 6fb6b3a514c8c8785e82d2d7248f6a40 328 PANTHER PTHR30537 13 327 3.8E-136 T 22-04-2016 YPO0276 6fb6b3a514c8c8785e82d2d7248f6a40 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 22 79 1.2E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0276 6fb6b3a514c8c8785e82d2d7248f6a40 328 Gene3D G3DSA:1.10.10.10 22 96 7.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0276 6fb6b3a514c8c8785e82d2d7248f6a40 328 Pfam PF03466 LysR substrate binding domain 106 310 5.5E-33 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0276 6fb6b3a514c8c8785e82d2d7248f6a40 328 PANTHER PTHR30537:SF5 13 327 3.8E-136 T 22-04-2016 YPO0276 6fb6b3a514c8c8785e82d2d7248f6a40 328 Gene3D G3DSA:3.40.190.10 193 273 7.4E-15 T 22-04-2016 YPO0276 6fb6b3a514c8c8785e82d2d7248f6a40 328 Gene3D G3DSA:3.40.190.10 109 192 4.8E-16 T 22-04-2016 YPO3697 3558d9d7523290c88f3a90e1b00418f4 471 SUPERFAMILY SSF55604 10 81 3.27E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO3697 3558d9d7523290c88f3a90e1b00418f4 471 Gene3D G3DSA:3.30.1360.60 6 83 2.2E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO3697 3558d9d7523290c88f3a90e1b00418f4 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPO3697 3558d9d7523290c88f3a90e1b00418f4 471 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 3.8E-211 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 YPO3697 3558d9d7523290c88f3a90e1b00418f4 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 7.9E-16 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO3697 3558d9d7523290c88f3a90e1b00418f4 471 PANTHER PTHR30175 1 466 3.7E-272 T 22-04-2016 YPO3697 3558d9d7523290c88f3a90e1b00418f4 471 PANTHER PTHR30175:SF4 1 466 3.7E-272 T 22-04-2016 YPO3697 3558d9d7523290c88f3a90e1b00418f4 471 Pfam PF00367 phosphotransferase system, EIIB 11 41 6.4E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPO3697 3558d9d7523290c88f3a90e1b00418f4 471 Pfam PF02378 Phosphotransferase system, EIIC 112 404 2.9E-33 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPO0510 af74e2decb98b6b1a002a5ae5f90b07b 367 Pfam PF00805 Pentapeptide repeats (8 copies) 291 321 0.0027 T 22-04-2016 IPR001646 Pentapeptide repeat YPO0510 af74e2decb98b6b1a002a5ae5f90b07b 367 PANTHER PTHR14136:SF0 5 367 2.2E-111 T 22-04-2016 YPO0510 af74e2decb98b6b1a002a5ae5f90b07b 367 Pfam PF13599 Pentapeptide repeats (9 copies) 212 276 2.0E-11 T 22-04-2016 IPR001646 Pentapeptide repeat YPO0510 af74e2decb98b6b1a002a5ae5f90b07b 367 Pfam PF13599 Pentapeptide repeats (9 copies) 37 121 2.6E-9 T 22-04-2016 IPR001646 Pentapeptide repeat YPO0510 af74e2decb98b6b1a002a5ae5f90b07b 367 Gene3D G3DSA:2.160.20.10 34 163 3.5E-7 T 22-04-2016 IPR012334 Pectin lyase fold YPO0510 af74e2decb98b6b1a002a5ae5f90b07b 367 Gene3D G3DSA:2.160.20.10 211 231 3.5E-7 T 22-04-2016 IPR012334 Pectin lyase fold YPO0510 af74e2decb98b6b1a002a5ae5f90b07b 367 SUPERFAMILY SSF141571 16 169 5.76E-21 T 22-04-2016 YPO0510 af74e2decb98b6b1a002a5ae5f90b07b 367 PANTHER PTHR14136 5 367 2.2E-111 T 22-04-2016 YPO0510 af74e2decb98b6b1a002a5ae5f90b07b 367 SUPERFAMILY SSF141571 157 325 7.26E-35 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 SUPERFAMILY SSF101967 196 340 1.83E-23 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 PANTHER PTHR35843:SF2 569 605 2.5E-18 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 PANTHER PTHR35843:SF2 444 539 2.5E-18 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 PANTHER PTHR35843:SF2 108 412 2.5E-18 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 PANTHER PTHR35843:SF2 623 663 2.5E-18 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Gene3D G3DSA:1.20.5.170 487 529 2.9E-5 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 SUPERFAMILY SSF101967 364 499 6.02E-24 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 PANTHER PTHR35843 569 605 2.5E-18 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 PANTHER PTHR35843 444 539 2.5E-18 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 PANTHER PTHR35843 108 412 2.5E-18 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 PANTHER PTHR35843 623 663 2.5E-18 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 317 337 3.5E-7 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 476 496 7.0E-9 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 637 657 3.0E-6 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Pfam PF05658 Head domain of trimeric autotransporter adhesin 575 601 7.2E-5 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Pfam PF05658 Head domain of trimeric autotransporter adhesin 547 572 5.1E-5 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Pfam PF05658 Head domain of trimeric autotransporter adhesin 257 283 9.4E-5 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Pfam PF05658 Head domain of trimeric autotransporter adhesin 388 414 2.3E-6 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 SUPERFAMILY SSF101967 108 181 5.36E-5 T 22-04-2016 YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Gene3D G3DSA:2.150.10.10 200 340 2.3E-23 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Gene3D G3DSA:2.150.10.10 111 181 5.0E-5 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Gene3D G3DSA:2.150.10.10 341 486 1.7E-21 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 Gene3D G3DSA:2.150.10.10 543 660 1.0E-19 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1684 f68fb58d29b7b3b9a694a4d175bdb406 736 SUPERFAMILY SSF101967 524 660 2.48E-18 T 22-04-2016 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 PANTHER PTHR30070 1 219 6.6E-77 T 22-04-2016 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 Pfam PF03379 CcmB protein 3 216 4.5E-93 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 PANTHER PTHR30070:SF1 1 219 6.6E-77 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 7.3E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2735 3c62885123e84e23ec2983e4f93724f2 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 1.6E-96 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPO2735 3c62885123e84e23ec2983e4f93724f2 219 PIRSF PIRSF002764 1 219 8.0E-87 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 Gene3D G3DSA:3.40.630.30 1 78 2.1E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 Gene3D G3DSA:3.40.630.30 113 135 2.1E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 Gene3D G3DSA:2.40.40.20 285 343 3.8E-18 T 22-04-2016 YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 SUPERFAMILY SSF55729 1 343 3.82E-132 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 PANTHER PTHR30420 1 350 3.2E-227 T 22-04-2016 YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 4 343 9.6E-146 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 350 70.963 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 PANTHER PTHR30420:SF1 1 350 3.2E-227 T 22-04-2016 YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 341 9.6E-144 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YPO1963 725a8b13ebb064b420dfe1a7692cb5a7 350 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 4 343 1.8E-155 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YPO3218 90e39e8c6970454c73f6b0b46de59401 173 PANTHER PTHR10108:SF835 2 167 4.4E-56 T 22-04-2016 YPO3218 90e39e8c6970454c73f6b0b46de59401 173 SUPERFAMILY SSF53335 4 168 9.16E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3218 90e39e8c6970454c73f6b0b46de59401 173 PANTHER PTHR10108 2 167 4.4E-56 T 22-04-2016 YPO3218 90e39e8c6970454c73f6b0b46de59401 173 Gene3D G3DSA:3.40.50.150 3 172 1.5E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3218 90e39e8c6970454c73f6b0b46de59401 173 Pfam PF08241 Methyltransferase domain 9 63 9.6E-17 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YPO3725 0ef361892d7ed64e494c81749c00dfdf 435 Pfam PF00463 Isocitrate lyase family 9 256 8.4E-63 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YPO3725 0ef361892d7ed64e494c81749c00dfdf 435 Pfam PF00463 Isocitrate lyase family 258 435 4.9E-50 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YPO3725 0ef361892d7ed64e494c81749c00dfdf 435 PIRSF PIRSF001362 1 435 1.7E-224 T 22-04-2016 YPO3725 0ef361892d7ed64e494c81749c00dfdf 435 Gene3D G3DSA:3.20.20.60 6 418 3.9E-172 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO3725 0ef361892d7ed64e494c81749c00dfdf 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 YPO3725 0ef361892d7ed64e494c81749c00dfdf 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 2.4E-89 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YPO3725 0ef361892d7ed64e494c81749c00dfdf 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 2.3E-116 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YPO3725 0ef361892d7ed64e494c81749c00dfdf 435 PANTHER PTHR21631 3 435 7.7E-180 T 22-04-2016 YPO3725 0ef361892d7ed64e494c81749c00dfdf 435 SUPERFAMILY SSF51621 5 435 8.52E-156 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 SUPERFAMILY SSF52540 255 486 7.46E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 SUPERFAMILY SSF52540 4 230 5.44E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 PANTHER PTHR24220 7 379 7.4E-145 T 22-04-2016 YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 PANTHER PTHR24220:SF308 7 379 7.4E-145 T 22-04-2016 YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 Gene3D G3DSA:3.40.50.300 3 233 2.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 Gene3D G3DSA:3.40.50.300 258 492 2.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 Pfam PF00005 ABC transporter 269 424 6.0E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 Pfam PF00005 ABC transporter 21 170 2.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 SMART SM00382 30 218 9.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0958 39abffb9ce8d90e6b3a233e6ae2ca113 499 SMART SM00382 278 473 0.01 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO4035 47a45151ba7d080ca86b78255cc28f6a 394 PANTHER PTHR32196 240 393 1.3E-179 T 22-04-2016 YPO4035 47a45151ba7d080ca86b78255cc28f6a 394 PANTHER PTHR32196 1 184 1.3E-179 T 22-04-2016 YPO4035 47a45151ba7d080ca86b78255cc28f6a 394 PANTHER PTHR32196:SF32 240 393 1.3E-179 T 22-04-2016 YPO4035 47a45151ba7d080ca86b78255cc28f6a 394 PANTHER PTHR32196:SF32 1 184 1.3E-179 T 22-04-2016 YPO4035 47a45151ba7d080ca86b78255cc28f6a 394 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 384 9.9E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3812 0f174b6e35fc67a567d9cfe7ed461537 317 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 19 316 1.6E-130 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 YPO3812 0f174b6e35fc67a567d9cfe7ed461537 317 PANTHER PTHR30489 17 316 3.0E-60 T 22-04-2016 YPO3812 0f174b6e35fc67a567d9cfe7ed461537 317 Pfam PF02687 FtsX-like permease family 193 307 3.4E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPO3812 0f174b6e35fc67a567d9cfe7ed461537 317 PIRSF PIRSF003097 16 313 1.0E-94 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 YPO0661 06bfaeb3ed7aea6f00e9b63191e15060 228 Pfam PF06693 Protein of unknown function (DUF1190) 42 212 3.4E-55 T 22-04-2016 IPR009576 Biofilm formation YgiB YPO0661 06bfaeb3ed7aea6f00e9b63191e15060 228 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 2 228 48.582 T 22-04-2016 IPR009576 Biofilm formation YgiB YPO1260 7c256689a7e11381144d3c0de77e31c1 598 PANTHER PTHR10342 231 579 6.0E-164 T 22-04-2016 YPO1260 7c256689a7e11381144d3c0de77e31c1 598 PANTHER PTHR10342:SF215 231 579 6.0E-164 T 22-04-2016 YPO1260 7c256689a7e11381144d3c0de77e31c1 598 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 5.3E-108 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal YPO1260 7c256689a7e11381144d3c0de77e31c1 598 SUPERFAMILY SSF53649 256 582 4.51E-50 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO1260 7c256689a7e11381144d3c0de77e31c1 598 Gene3D G3DSA:3.40.720.10 260 533 4.1E-32 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO1260 7c256689a7e11381144d3c0de77e31c1 598 Pfam PF00884 Sulfatase 260 512 1.5E-25 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPO1260 7c256689a7e11381144d3c0de77e31c1 598 PIRSF PIRSF004950 6 598 4.4E-244 T 22-04-2016 IPR012159 Inner membrane protein YejM YPO4016 be6c634f64d90b53f0f2797f821a280f 510 Gene3D G3DSA:1.20.200.10 198 503 4.4E-124 T 22-04-2016 YPO4016 be6c634f64d90b53f0f2797f821a280f 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 508 3.5E-217 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO4016 be6c634f64d90b53f0f2797f821a280f 510 Pfam PF00221 Aromatic amino acid lyase 11 470 2.6E-184 T 22-04-2016 IPR001106 Aromatic amino acid lyase YPO4016 be6c634f64d90b53f0f2797f821a280f 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 43.674 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO4016 be6c634f64d90b53f0f2797f821a280f 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 YPO4016 be6c634f64d90b53f0f2797f821a280f 510 SUPERFAMILY SSF48557 3 506 1.41E-190 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPO4016 be6c634f64d90b53f0f2797f821a280f 510 Gene3D G3DSA:1.10.275.10 2 197 9.2E-75 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPO4016 be6c634f64d90b53f0f2797f821a280f 510 PANTHER PTHR10362 3 501 3.7E-261 T 22-04-2016 YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 3.9E-62 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 PIRSF PIRSF000535 2 311 2.5E-114 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 PANTHER PTHR10584:SF170 1 308 1.4E-126 T 22-04-2016 YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 SUPERFAMILY SSF53613 7 306 8.89E-66 T 22-04-2016 IPR029056 Ribokinase-like YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 PANTHER PTHR10584 1 308 1.4E-126 T 22-04-2016 YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 Gene3D G3DSA:3.40.1190.20 37 309 4.3E-83 T 22-04-2016 IPR029056 Ribokinase-like YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 9.3E-100 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 5.8E-98 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 YPO1299 02c1d9f8b0894d3f1fe0f3d4a008d985 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 PANTHER PTHR10584:SF159 1 338 5.2E-157 T 22-04-2016 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.6E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 Gene3D G3DSA:3.40.50.620 340 461 1.1E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.0E-125 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 Pfam PF00294 pfkB family carbohydrate kinase 13 305 1.5E-50 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 SUPERFAMILY SSF52374 340 470 3.56E-22 T 22-04-2016 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.119 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 Gene3D G3DSA:3.40.1190.20 13 313 1.4E-64 T 22-04-2016 IPR029056 Ribokinase-like YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 PANTHER PTHR10584 1 338 5.2E-157 T 22-04-2016 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 2.2E-63 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 Pfam PF01467 Cytidylyltransferase-like 345 469 1.0E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPO0654 181beefb91ce9b1325eadf5dc162ffb4 476 SUPERFAMILY SSF53613 12 310 2.18E-55 T 22-04-2016 IPR029056 Ribokinase-like YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82693 788 833 1.52E-5 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82693 665 701 1.52E-5 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 Gene3D G3DSA:3.30.2090.10 183 262 9.1E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 Gene3D G3DSA:3.30.2090.10 703 784 1.0E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82693 40 135 1.62E-23 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PANTHER PTHR32063 1 1024 0.0 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82693 555 650 1.55E-17 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82714 703 785 3.01E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82866 812 1010 9.29E-42 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 PANTHER PTHR32063:SF34 1 1024 0.0 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 Gene3D G3DSA:3.30.70.1430 40 141 4.1E-30 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 26.981 T 22-04-2016 IPR023931 Multidrug resistance protein MdtC YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 Gene3D G3DSA:1.20.1640.10 285 499 2.8E-57 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82714 183 265 1.14E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82866 290 491 6.02E-47 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 Gene3D G3DSA:3.30.70.1430 558 647 1.2E-13 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82693 136 182 1.39E-21 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 SUPERFAMILY SSF82693 268 324 1.39E-21 T 22-04-2016 YPO2849 2a5167f5896e0a3d11462c23c755bd2f 1024 Gene3D G3DSA:1.10.3850.10 794 1010 6.6E-53 T 22-04-2016 YPO1081 7450947fe154a02532eb73441684f18f 154 PANTHER PTHR10642 1 152 1.7E-63 T 22-04-2016 YPO1081 7450947fe154a02532eb73441684f18f 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 38.32 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 YPO1081 7450947fe154a02532eb73441684f18f 154 Pfam PF00075 RNase H 3 141 2.5E-53 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 YPO1081 7450947fe154a02532eb73441684f18f 154 SUPERFAMILY SSF53098 3 143 2.02E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1081 7450947fe154a02532eb73441684f18f 154 Gene3D G3DSA:3.30.420.10 2 148 1.4E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0059 ca9de5a63958c6db9f22191bfd914379 403 Gene3D G3DSA:3.40.640.10 66 283 2.8E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0059 ca9de5a63958c6db9f22191bfd914379 403 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 10 402 1.1E-216 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 YPO0059 ca9de5a63958c6db9f22191bfd914379 403 Pfam PF00155 Aminotransferase class I and II 48 392 8.0E-79 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO0059 ca9de5a63958c6db9f22191bfd914379 403 PANTHER PTHR13693:SF60 12 402 1.6E-264 T 22-04-2016 YPO0059 ca9de5a63958c6db9f22191bfd914379 403 PANTHER PTHR13693 12 402 1.6E-264 T 22-04-2016 YPO0059 ca9de5a63958c6db9f22191bfd914379 403 SUPERFAMILY SSF53383 9 401 8.64E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO0059 ca9de5a63958c6db9f22191bfd914379 403 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 7 400 53.471 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 YPO0059 ca9de5a63958c6db9f22191bfd914379 403 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 246 255 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 YPO0059 ca9de5a63958c6db9f22191bfd914379 403 Gene3D G3DSA:3.90.1150.10 284 398 2.9E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO3637 b5532775c0068183802ff244d35ff0b1 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 1.6E-30 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPO3637 b5532775c0068183802ff244d35ff0b1 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 489 2.6E-40 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPO3637 b5532775c0068183802ff244d35ff0b1 545 PIRSF PIRSF000538 2 542 8.1E-77 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO3637 b5532775c0068183802ff244d35ff0b1 545 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 537 2.5E-209 T 22-04-2016 IPR006003 Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO3637 b5532775c0068183802ff244d35ff0b1 545 SUPERFAMILY SSF53067 4 263 2.95E-60 T 22-04-2016 YPO3637 b5532775c0068183802ff244d35ff0b1 545 Gene3D G3DSA:3.30.420.40 2 262 6.3E-71 T 22-04-2016 YPO3637 b5532775c0068183802ff244d35ff0b1 545 Gene3D G3DSA:3.30.420.40 279 537 2.8E-62 T 22-04-2016 YPO3637 b5532775c0068183802ff244d35ff0b1 545 PANTHER PTHR10196:SF59 1 545 3.9E-261 T 22-04-2016 YPO3637 b5532775c0068183802ff244d35ff0b1 545 PANTHER PTHR10196 1 545 3.9E-261 T 22-04-2016 YPO3637 b5532775c0068183802ff244d35ff0b1 545 SUPERFAMILY SSF53067 280 532 4.53E-56 T 22-04-2016 YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 Gene3D G3DSA:2.40.50.100 342 355 1.5E-4 T 22-04-2016 YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 Gene3D G3DSA:2.40.50.100 267 281 1.5E-4 T 22-04-2016 YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 Gene3D G3DSA:2.40.50.140 282 339 1.9E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 Pfam PF08402 TOBE domain 277 348 4.8E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 PANTHER PTHR24220 5 293 6.4E-158 T 22-04-2016 YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 SMART SM00382 28 211 7.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 Gene3D G3DSA:3.40.50.300 4 234 1.4E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 Pfam PF00005 ABC transporter 20 161 1.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 PANTHER PTHR24220:SF151 5 293 6.4E-158 T 22-04-2016 YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 SUPERFAMILY SSF52540 4 243 2.18E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2480 7c3416b65025f46b31a4ebd5891fa3b2 359 SUPERFAMILY SSF50331 237 355 1.89E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO3094 c183d8e22ff1d9815d0a6f85e69de28a 563 PANTHER PTHR16254 1 550 0.0 T 22-04-2016 YPO3094 c183d8e22ff1d9815d0a6f85e69de28a 563 Pfam PF02254 TrkA-N domain 420 534 6.7E-21 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPO3094 c183d8e22ff1d9815d0a6f85e69de28a 563 SUPERFAMILY SSF51735 418 547 1.14E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3094 c183d8e22ff1d9815d0a6f85e69de28a 563 PANTHER PTHR16254:SF17 1 550 0.0 T 22-04-2016 YPO3094 c183d8e22ff1d9815d0a6f85e69de28a 563 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 9.0E-81 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 YPO3094 c183d8e22ff1d9815d0a6f85e69de28a 563 Gene3D G3DSA:3.40.50.720 413 547 2.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3094 c183d8e22ff1d9815d0a6f85e69de28a 563 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 9.9E-80 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YPO0940 bc915ffb4ada40f9978e9ad8c85facde 358 Pfam PF00437 Type II/IV secretion system protein 133 295 2.3E-41 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPO0940 bc915ffb4ada40f9978e9ad8c85facde 358 Gene3D G3DSA:3.30.450.90 24 124 1.4E-4 T 22-04-2016 YPO0940 bc915ffb4ada40f9978e9ad8c85facde 358 SMART SM00382 147 272 0.0088 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0940 bc915ffb4ada40f9978e9ad8c85facde 358 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 30 355 1.2E-130 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 YPO0940 bc915ffb4ada40f9978e9ad8c85facde 358 Gene3D G3DSA:3.40.50.300 129 354 4.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0940 bc915ffb4ada40f9978e9ad8c85facde 358 SUPERFAMILY SSF52540 10 353 1.66E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0940 bc915ffb4ada40f9978e9ad8c85facde 358 PANTHER PTHR30486 22 355 1.2E-171 T 22-04-2016 YPO0940 bc915ffb4ada40f9978e9ad8c85facde 358 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 218 232 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPO0940 bc915ffb4ada40f9978e9ad8c85facde 358 PANTHER PTHR30486:SF6 22 355 1.2E-171 T 22-04-2016 YPO0302 258124a2abd3baa8c114a598b7bf54b3 792 SUPERFAMILY SSF141729 30 139 2.09E-15 T 22-04-2016 YPO0302 258124a2abd3baa8c114a598b7bf54b3 792 Pfam PF00577 Outer membrane usher protein 177 704 5.7E-67 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO0302 258124a2abd3baa8c114a598b7bf54b3 792 PANTHER PTHR30451:SF8 1 792 0.0 T 22-04-2016 YPO0302 258124a2abd3baa8c114a598b7bf54b3 792 PANTHER PTHR30451 1 792 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO0302 258124a2abd3baa8c114a598b7bf54b3 792 Pfam PF13954 PapC N-terminal domain 33 159 1.5E-13 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPO0302 258124a2abd3baa8c114a598b7bf54b3 792 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 284 294 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YPO0302 258124a2abd3baa8c114a598b7bf54b3 792 Pfam PF13953 PapC C-terminal domain 713 776 8.2E-12 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPO3848 1eb8a6ff027a61fc945c2541a2436b48 850 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 YPO3848 1eb8a6ff027a61fc945c2541a2436b48 850 Pfam PF01295 Adenylate cyclase, class-I 228 825 1.5E-261 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 YPO3848 1eb8a6ff027a61fc945c2541a2436b48 850 PANTHER PTHR38760 2 850 0.0 T 22-04-2016 YPO3848 1eb8a6ff027a61fc945c2541a2436b48 850 PIRSF PIRSF001444 1 850 0.0 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 YPO3848 1eb8a6ff027a61fc945c2541a2436b48 850 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 YPO3848 1eb8a6ff027a61fc945c2541a2436b48 850 Pfam PF12633 Adenylate cyclase NT domain 5 200 5.1E-80 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 YPO2889 70436c150c72d158fe5696a0e0c50484 432 PANTHER PTHR11963:SF20 45 432 2.2E-272 T 22-04-2016 YPO2889 70436c150c72d158fe5696a0e0c50484 432 Gene3D G3DSA:3.40.630.10 99 430 3.3E-118 T 22-04-2016 YPO2889 70436c150c72d158fe5696a0e0c50484 432 PANTHER PTHR11963 45 432 2.2E-272 T 22-04-2016 YPO2889 70436c150c72d158fe5696a0e0c50484 432 Hamap MF_00504 Peptidase B [pepB]. 4 428 70.354 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YPO2889 70436c150c72d158fe5696a0e0c50484 432 Pfam PF12404 Peptidase 6 82 1.1E-35 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YPO2889 70436c150c72d158fe5696a0e0c50484 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 2.3E-101 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPO2889 70436c150c72d158fe5696a0e0c50484 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO2889 70436c150c72d158fe5696a0e0c50484 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO2889 70436c150c72d158fe5696a0e0c50484 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO2889 70436c150c72d158fe5696a0e0c50484 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO2889 70436c150c72d158fe5696a0e0c50484 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 6.6E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YPO2889 70436c150c72d158fe5696a0e0c50484 432 PIRSF PIRSF036388 2 432 1.4E-239 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YPO2889 70436c150c72d158fe5696a0e0c50484 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YPO2889 70436c150c72d158fe5696a0e0c50484 432 SUPERFAMILY SSF53187 108 427 1.07E-102 T 22-04-2016 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 SMART SM00642 247 596 8.8E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 4.2E-21 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 PIRSF PIRSF000463 6 727 2.4E-286 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 Gene3D G3DSA:2.60.40.10 113 220 1.4E-41 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPO3942 8d75be2bd095ac380c1856f835d610ea 727 Gene3D G3DSA:2.60.40.10 14 105 4.4E-16 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPO3942 8d75be2bd095ac380c1856f835d610ea 727 Gene3D G3DSA:3.20.20.80 242 611 4.4E-92 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 Gene3D G3DSA:2.60.40.1180 623 723 1.4E-34 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YPO3942 8d75be2bd095ac380c1856f835d610ea 727 SUPERFAMILY SSF51011 623 726 8.51E-34 T 22-04-2016 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 PANTHER PTHR10357:SF158 49 725 0.0 T 22-04-2016 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.934 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 SUPERFAMILY SSF81296 16 115 1.36E-16 T 22-04-2016 IPR014756 Immunoglobulin E-set YPO3942 8d75be2bd095ac380c1856f835d610ea 727 SUPERFAMILY SSF51445 233 620 5.07E-114 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO3942 8d75be2bd095ac380c1856f835d610ea 727 PANTHER PTHR10357 49 725 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 Pfam PF00128 Alpha amylase, catalytic domain 273 347 4.9E-10 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 5.7E-301 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 1.6E-25 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 YPO3942 8d75be2bd095ac380c1856f835d610ea 727 SUPERFAMILY SSF81296 117 223 1.28E-36 T 22-04-2016 IPR014756 Immunoglobulin E-set YPO2653 e563a6f4787aff14989ee4e53d439fde 111 Gene3D G3DSA:3.30.920.30 2 61 2.1E-4 T 22-04-2016 YPO2653 e563a6f4787aff14989ee4e53d439fde 111 SUPERFAMILY SSF159894 1 111 1.33E-56 T 22-04-2016 YPO2653 e563a6f4787aff14989ee4e53d439fde 111 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 1.7E-54 T 22-04-2016 IPR018994 Protein of unknown function DUF2002 YPO2383 946e7670d043a1772f20ab79633cbb56 116 Pfam PF00462 Glutaredoxin 16 80 9.0E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPO2383 946e7670d043a1772f20ab79633cbb56 116 Gene3D G3DSA:3.40.30.10 7 101 2.4E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2383 946e7670d043a1772f20ab79633cbb56 116 SUPERFAMILY SSF52833 2 101 1.15E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2383 946e7670d043a1772f20ab79633cbb56 116 PIRSF PIRSF005894 1 107 4.8E-52 T 22-04-2016 IPR014434 Monothiol glutaredoxin YPO2383 946e7670d043a1772f20ab79633cbb56 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 3.8E-47 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related YPO2383 946e7670d043a1772f20ab79633cbb56 116 PANTHER PTHR10293 1 116 2.0E-61 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related YPO4071 1dec0e821a30cc058442d229c91793bc 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 3.6E-212 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4071 1dec0e821a30cc058442d229c91793bc 689 Gene3D G3DSA:1.10.730.10 582 678 4.9E-5 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO4071 1dec0e821a30cc058442d229c91793bc 689 SUPERFAMILY SSF109604 339 536 1.67E-15 T 22-04-2016 YPO4071 1dec0e821a30cc058442d229c91793bc 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.636 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4071 1dec0e821a30cc058442d229c91793bc 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4071 1dec0e821a30cc058442d229c91793bc 689 Pfam PF05746 DALR anticodon binding domain 582 679 4.0E-8 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YPO4071 1dec0e821a30cc058442d229c91793bc 689 PANTHER PTHR30075 1 689 0.0 T 22-04-2016 YPO4071 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4071 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4071 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4071 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4071 1dec0e821a30cc058442d229c91793bc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO3046 0ee8665277decf4dde01cbca5178adf7 391 Pfam PF13353 4Fe-4S single cluster domain 11 117 6.6E-5 T 22-04-2016 YPO3046 0ee8665277decf4dde01cbca5178adf7 391 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 2 363 7.8E-150 T 22-04-2016 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 YPO3046 0ee8665277decf4dde01cbca5178adf7 391 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 158 378 1.0E-14 T 22-04-2016 YPO3046 0ee8665277decf4dde01cbca5178adf7 391 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 264 344 1.4E-17 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain YPO3046 0ee8665277decf4dde01cbca5178adf7 391 SUPERFAMILY SSF102114 9 327 8.5E-48 T 22-04-2016 YPO3046 0ee8665277decf4dde01cbca5178adf7 391 Pfam PF04055 Radical SAM superfamily 10 172 2.2E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO3046 0ee8665277decf4dde01cbca5178adf7 391 PANTHER PTHR11228 1 354 8.3E-111 T 22-04-2016 YPO3046 0ee8665277decf4dde01cbca5178adf7 391 Gene3D G3DSA:3.20.20.70 9 333 3.4E-48 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3046 0ee8665277decf4dde01cbca5178adf7 391 PANTHER PTHR11228:SF7 1 354 8.3E-111 T 22-04-2016 YPO0049 13f0a0c8e0ce38c84603441951afeb6d 222 PANTHER PTHR30471:SF5 1 222 1.8E-151 T 22-04-2016 YPO0049 13f0a0c8e0ce38c84603441951afeb6d 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site YPO0049 13f0a0c8e0ce38c84603441951afeb6d 222 PANTHER PTHR30471 1 222 1.8E-151 T 22-04-2016 YPO0049 13f0a0c8e0ce38c84603441951afeb6d 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 52.775 T 22-04-2016 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YPO0049 13f0a0c8e0ce38c84603441951afeb6d 222 Gene3D G3DSA:3.40.140.10 100 222 8.2E-49 T 22-04-2016 YPO0049 13f0a0c8e0ce38c84603441951afeb6d 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 10 222 3.7E-82 T 22-04-2016 IPR001405 RadC protein YPO0049 13f0a0c8e0ce38c84603441951afeb6d 222 Pfam PF04002 RadC-like JAB domain 107 220 1.7E-43 T 22-04-2016 IPR025657 RadC-like JAB domain YPO0049 13f0a0c8e0ce38c84603441951afeb6d 222 SUPERFAMILY SSF47781 16 83 5.34E-11 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.4E-24 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 SMART SM00419 160 208 4.5E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 PANTHER PTHR24567:SF27 1 207 1.4E-156 T 22-04-2016 YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 Gene3D G3DSA:2.60.120.10 6 143 1.2E-44 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 SUPERFAMILY SSF51206 8 136 1.23E-35 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 PANTHER PTHR24567 1 207 1.4E-156 T 22-04-2016 YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 YPO0175 677797853f26d0ffd9d0cda9ef8774c2 210 SMART SM00100 2 122 1.1E-26 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YPO0144 5937ed14835c5ee182f1e8e0895a523b 181 Gene3D G3DSA:3.90.79.10 8 180 7.8E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO0144 5937ed14835c5ee182f1e8e0895a523b 181 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPO0144 5937ed14835c5ee182f1e8e0895a523b 181 SUPERFAMILY SSF55811 3 179 9.88E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO0144 5937ed14835c5ee182f1e8e0895a523b 181 PANTHER PTHR11839 1 181 1.6E-106 T 22-04-2016 YPO0144 5937ed14835c5ee182f1e8e0895a523b 181 Pfam PF00293 NUDIX domain 46 139 1.0E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO0144 5937ed14835c5ee182f1e8e0895a523b 181 PANTHER PTHR11839:SF12 1 181 1.6E-106 T 22-04-2016 YPO3682 dacaf21f97115ec79adef1ee32b52e9d 288 Gene3D G3DSA:1.10.10.10 5 79 5.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3682 dacaf21f97115ec79adef1ee32b52e9d 288 PANTHER PTHR30126:SF13 1 288 7.7E-88 T 22-04-2016 YPO3682 dacaf21f97115ec79adef1ee32b52e9d 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.1E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3682 dacaf21f97115ec79adef1ee32b52e9d 288 SUPERFAMILY SSF46785 6 84 2.67E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3682 dacaf21f97115ec79adef1ee32b52e9d 288 PANTHER PTHR30126 1 288 7.7E-88 T 22-04-2016 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 Gene3D G3DSA:3.40.630.40 197 294 1.6E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 Gene3D G3DSA:3.40.630.40 346 421 1.6E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 SUPERFAMILY SSF54106 548 591 6.15E-11 T 22-04-2016 IPR018392 LysM domain YPO0370 f7151978bf46ad789839af7c0052a6e1 593 SUPERFAMILY SSF53187 345 421 3.14E-52 T 22-04-2016 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 SUPERFAMILY SSF53187 197 293 3.14E-52 T 22-04-2016 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 SUPERFAMILY SSF54106 482 525 3.27E-10 T 22-04-2016 IPR018392 LysM domain YPO0370 f7151978bf46ad789839af7c0052a6e1 593 Gene3D G3DSA:3.10.350.10 480 526 2.1E-15 T 22-04-2016 IPR018392 LysM domain YPO0370 f7151978bf46ad789839af7c0052a6e1 593 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 199 418 1.4E-48 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 SMART SM00646 259 418 6.7E-73 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 SMART SM00257 548 591 2.7E-16 T 22-04-2016 IPR018392 LysM domain YPO0370 f7151978bf46ad789839af7c0052a6e1 593 SMART SM00257 482 525 3.4E-12 T 22-04-2016 IPR018392 LysM domain YPO0370 f7151978bf46ad789839af7c0052a6e1 593 Pfam PF11741 AMIN domain 27 119 1.6E-7 T 22-04-2016 IPR021731 AMIN domain YPO0370 f7151978bf46ad789839af7c0052a6e1 593 PANTHER PTHR30404:SF1 186 451 1.6E-258 T 22-04-2016 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 PANTHER PTHR30404:SF1 1 167 1.6E-258 T 22-04-2016 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 Gene3D G3DSA:3.10.350.10 548 592 4.5E-17 T 22-04-2016 IPR018392 LysM domain YPO0370 f7151978bf46ad789839af7c0052a6e1 593 Pfam PF01476 LysM domain 549 591 6.8E-13 T 22-04-2016 IPR018392 LysM domain YPO0370 f7151978bf46ad789839af7c0052a6e1 593 Pfam PF01476 LysM domain 483 525 1.3E-10 T 22-04-2016 IPR018392 LysM domain YPO0370 f7151978bf46ad789839af7c0052a6e1 593 PANTHER PTHR30404 186 451 1.6E-258 T 22-04-2016 YPO0370 f7151978bf46ad789839af7c0052a6e1 593 PANTHER PTHR30404 1 167 1.6E-258 T 22-04-2016 YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 PANTHER PTHR24220:SF538 22 401 2.8E-230 T 22-04-2016 YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 PANTHER PTHR24220 22 401 2.8E-230 T 22-04-2016 YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 Gene3D G3DSA:3.40.50.300 287 509 1.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 Gene3D G3DSA:3.40.50.300 19 260 9.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 Pfam PF00005 ABC transporter 36 192 3.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 Pfam PF00005 ABC transporter 293 447 8.4E-13 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 SUPERFAMILY SSF52540 21 252 1.57E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 SUPERFAMILY SSF52540 287 506 1.72E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1814 a85d0dd18495d878d9feeef4cf9448c2 525 SMART SM00382 45 241 3.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 PANTHER PTHR10982 1 309 1.4E-164 T 22-04-2016 YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 Gene3D G3DSA:3.40.366.10 2 122 2.1E-69 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 Gene3D G3DSA:3.40.366.10 197 301 2.1E-69 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 7.2E-129 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 1.9E-39 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 Pfam PF00698 Acyl transferase domain 7 298 1.2E-36 T 22-04-2016 IPR014043 Acyl transferase YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 SUPERFAMILY SSF55048 128 197 4.97E-18 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 PIRSF PIRSF000446 1 309 2.9E-137 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 SUPERFAMILY SSF52151 190 307 1.41E-79 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 SUPERFAMILY SSF52151 4 122 1.41E-79 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPO1598 3f2316e9b5de2dffc20c33e578d343f1 309 Gene3D G3DSA:3.30.70.250 125 196 2.7E-31 T 22-04-2016 YPO2926 3390b09536e72be2cc62b31bfc5c7d4a 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 73 1.5E-24 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPO2926 3390b09536e72be2cc62b31bfc5c7d4a 279 Gene3D G3DSA:3.40.50.10490 100 266 6.1E-32 T 22-04-2016 YPO2926 3390b09536e72be2cc62b31bfc5c7d4a 279 PANTHER PTHR30514 1 275 1.5E-190 T 22-04-2016 YPO2926 3390b09536e72be2cc62b31bfc5c7d4a 279 SUPERFAMILY SSF46689 1 72 4.12E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2926 3390b09536e72be2cc62b31bfc5c7d4a 279 PANTHER PTHR30514:SF5 1 275 1.5E-190 T 22-04-2016 YPO2926 3390b09536e72be2cc62b31bfc5c7d4a 279 Gene3D G3DSA:1.10.10.10 1 74 4.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2926 3390b09536e72be2cc62b31bfc5c7d4a 279 Pfam PF01380 SIS domain 125 254 6.2E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO2926 3390b09536e72be2cc62b31bfc5c7d4a 279 SUPERFAMILY SSF53697 94 276 5.09E-34 T 22-04-2016 YPO1380 25e2d16c9f5fbe407b96ed619f2049de 382 Pfam PF07690 Major Facilitator Superfamily 11 299 4.3E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1380 25e2d16c9f5fbe407b96ed619f2049de 382 PANTHER PTHR23521:SF1 2 381 1.5E-229 T 22-04-2016 YPO1380 25e2d16c9f5fbe407b96ed619f2049de 382 Gene3D G3DSA:1.20.1250.20 6 181 5.2E-18 T 22-04-2016 YPO1380 25e2d16c9f5fbe407b96ed619f2049de 382 Gene3D G3DSA:1.20.1250.20 199 375 5.6E-18 T 22-04-2016 YPO1380 25e2d16c9f5fbe407b96ed619f2049de 382 PANTHER PTHR23521 2 381 1.5E-229 T 22-04-2016 YPO1380 25e2d16c9f5fbe407b96ed619f2049de 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 42.986 T 22-04-2016 IPR023745 MSF-type transporter, YcaD YPO1380 25e2d16c9f5fbe407b96ed619f2049de 382 SUPERFAMILY SSF103473 6 371 3.79E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3227 6c78c3397caa833d0385c56c34e23f75 534 PANTHER PTHR34823:SF2 6 527 0.0 T 22-04-2016 YPO3227 6c78c3397caa833d0385c56c34e23f75 534 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 38 241 7.2E-33 T 22-04-2016 IPR004302 Chitin-binding protein, N-terminal YPO3227 6c78c3397caa833d0385c56c34e23f75 534 PANTHER PTHR34823 6 527 0.0 T 22-04-2016 YPO3227 6c78c3397caa833d0385c56c34e23f75 534 SMART SM00089 367 451 2.8E-4 T 22-04-2016 IPR022409 PKD/Chitinase domain YPO3227 6c78c3397caa833d0385c56c34e23f75 534 Gene3D G3DSA:2.60.40.670 364 449 8.2E-8 T 22-04-2016 IPR000601 PKD domain YPO3227 6c78c3397caa833d0385c56c34e23f75 534 Gene3D G3DSA:2.70.50.50 38 244 8.8E-44 T 22-04-2016 YPO3227 6c78c3397caa833d0385c56c34e23f75 534 SUPERFAMILY SSF81296 38 244 4.76E-39 T 22-04-2016 IPR014756 Immunoglobulin E-set YPO3227 6c78c3397caa833d0385c56c34e23f75 534 SUPERFAMILY SSF49299 364 450 1.96E-8 T 22-04-2016 IPR000601 PKD domain YPO3906 f66a2a0fc388a6977507053ba7f48272 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 322 1.2E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3906 f66a2a0fc388a6977507053ba7f48272 339 PANTHER PTHR32196 1 339 7.3E-236 T 22-04-2016 YPO3906 f66a2a0fc388a6977507053ba7f48272 339 PANTHER PTHR32196:SF19 1 339 7.3E-236 T 22-04-2016 YPO1236 e3d391bbb43ed247df723db987518f61 203 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 194 1.8E-43 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO1236 e3d391bbb43ed247df723db987518f61 203 PANTHER PTHR22789:SF6 18 194 6.6E-106 T 22-04-2016 YPO1236 e3d391bbb43ed247df723db987518f61 203 PANTHER PTHR22789 18 194 6.6E-106 T 22-04-2016 YPO1236 e3d391bbb43ed247df723db987518f61 203 SUPERFAMILY SSF53639 25 193 3.73E-55 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO1236 e3d391bbb43ed247df723db987518f61 203 Gene3D G3DSA:3.40.225.10 25 193 7.6E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO1236 e3d391bbb43ed247df723db987518f61 203 SMART SM01007 31 199 1.4E-48 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO3649 a1631f25819f3a457a936f89ee58baed 131 PANTHER PTHR33570:SF2 1 129 8.1E-62 T 22-04-2016 YPO3649 a1631f25819f3a457a936f89ee58baed 131 SUPERFAMILY SSF69118 2 125 8.11E-34 T 22-04-2016 IPR029032 AhpD-like YPO3649 a1631f25819f3a457a936f89ee58baed 131 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 118 5.3E-23 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YPO3649 a1631f25819f3a457a936f89ee58baed 131 Gene3D G3DSA:1.20.1290.10 8 128 6.3E-23 T 22-04-2016 IPR029032 AhpD-like YPO3649 a1631f25819f3a457a936f89ee58baed 131 PANTHER PTHR33570 1 129 8.1E-62 T 22-04-2016 YPO0836 ee9d56fd5dd9420fbc91abd59445dc26 296 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 295 3.5E-80 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 YPO0836 ee9d56fd5dd9420fbc91abd59445dc26 296 PANTHER PTHR32502 19 296 5.1E-194 T 22-04-2016 YPO0836 ee9d56fd5dd9420fbc91abd59445dc26 296 PANTHER PTHR32502:SF6 19 296 5.1E-194 T 22-04-2016 YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1031 1430 2.6E-100 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 Pfam PF03212 Pertactin 1018 1125 5.3E-14 T 22-04-2016 IPR004899 Pertactin, central region YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 831 858 8.9E-5 T 22-04-2016 IPR030930 Adhesin of bacterial autotransporter system YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 518 554 7.9E-6 T 22-04-2016 IPR030930 Adhesin of bacterial autotransporter system YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 PANTHER PTHR35037 3 1430 0.0 T 22-04-2016 YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 SUPERFAMILY SSF103515 1140 1430 6.93E-44 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 PANTHER PTHR35037:SF1 3 1430 0.0 T 22-04-2016 YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 Gene3D G3DSA:2.40.128.130 1130 1430 1.3E-65 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 SUPERFAMILY SSF51126 730 1126 1.22E-20 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 SMART SM00869 1169 1419 4.5E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 Gene3D G3DSA:2.160.20.20 700 1126 3.3E-48 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO2886 68c31ab2ba33695038a0d59034d8c66d 1430 Pfam PF03797 Autotransporter beta-domain 1169 1408 1.3E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO3662 61c31ea1b23ae3a08cba0d84c6c68695 366 Pfam PF00174 Oxidoreductase molybdopterin binding domain 140 299 2.6E-27 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 YPO3662 61c31ea1b23ae3a08cba0d84c6c68695 366 PANTHER PTHR19372 1 361 1.9E-228 T 22-04-2016 YPO3662 61c31ea1b23ae3a08cba0d84c6c68695 366 SUPERFAMILY SSF56524 103 362 5.36E-93 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 YPO3662 61c31ea1b23ae3a08cba0d84c6c68695 366 PANTHER PTHR19372:SF1 1 361 1.9E-228 T 22-04-2016 YPO3662 61c31ea1b23ae3a08cba0d84c6c68695 366 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 36 366 60.913 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 YPO3662 61c31ea1b23ae3a08cba0d84c6c68695 366 Gene3D G3DSA:3.90.420.10 104 364 9.1E-74 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 Gene3D G3DSA:3.30.420.40 244 482 2.2E-53 T 22-04-2016 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 PIRSF PIRSF000538 1 484 6.2E-137 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 Gene3D G3DSA:3.30.420.40 1 240 8.1E-69 T 22-04-2016 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 SUPERFAMILY SSF53067 2 242 2.68E-73 T 22-04-2016 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.5E-83 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 PANTHER PTHR10196:SF72 1 484 0.0 T 22-04-2016 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 PANTHER PTHR10196 1 484 0.0 T 22-04-2016 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 436 4.9E-30 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 SUPERFAMILY SSF53067 242 482 1.02E-63 T 22-04-2016 YPO4039 179954e783818e4ca9b32eccfc02f2e1 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 2.0E-184 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 YPO3256 68324c0d7f6e6f833a8445dfb0cbfa7a 222 PANTHER PTHR30614:SF18 1 222 1.6E-104 T 22-04-2016 YPO3256 68324c0d7f6e6f833a8445dfb0cbfa7a 222 PANTHER PTHR30614 1 222 1.6E-104 T 22-04-2016 YPO3256 68324c0d7f6e6f833a8445dfb0cbfa7a 222 SUPERFAMILY SSF161098 15 202 4.97E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3256 68324c0d7f6e6f833a8445dfb0cbfa7a 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 209 2.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3256 68324c0d7f6e6f833a8445dfb0cbfa7a 222 Gene3D G3DSA:1.10.3720.10 13 210 6.6E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3256 68324c0d7f6e6f833a8445dfb0cbfa7a 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 2.7E-26 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO0117 43db8edda69e661af5c26b3d5b5e09e0 294 SUPERFAMILY SSF51730 22 293 4.71E-96 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPO0117 43db8edda69e661af5c26b3d5b5e09e0 294 PANTHER PTHR21091 149 280 2.8E-45 T 22-04-2016 YPO0117 43db8edda69e661af5c26b3d5b5e09e0 294 Gene3D G3DSA:3.20.20.220 12 293 4.0E-106 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPO0117 43db8edda69e661af5c26b3d5b5e09e0 294 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 7.8E-109 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YPO0117 43db8edda69e661af5c26b3d5b5e09e0 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.0E-103 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YPO3640 8a5e44d9b44a98dcb06dfeab733db6ab 448 SUPERFAMILY SSF63829 93 113 4.97E-6 T 22-04-2016 YPO3640 8a5e44d9b44a98dcb06dfeab733db6ab 448 SUPERFAMILY SSF63829 242 295 4.97E-6 T 22-04-2016 YPO3640 8a5e44d9b44a98dcb06dfeab733db6ab 448 SUPERFAMILY SSF63829 145 210 4.97E-6 T 22-04-2016 YPO3640 8a5e44d9b44a98dcb06dfeab733db6ab 448 PANTHER PTHR37957 1 446 9.8E-178 T 22-04-2016 YPO3640 8a5e44d9b44a98dcb06dfeab733db6ab 448 Pfam PF13449 Esterase-like activity of phytase 90 421 2.9E-67 T 22-04-2016 IPR027372 Phytase-like domain YPO3873 fdcb6943822b008ea66287d84bdef0c1 93 SUPERFAMILY SSF54534 4 90 2.68E-30 T 22-04-2016 YPO3873 fdcb6943822b008ea66287d84bdef0c1 93 Gene3D G3DSA:3.10.50.40 4 91 2.5E-35 T 22-04-2016 YPO3873 fdcb6943822b008ea66287d84bdef0c1 93 PANTHER PTHR10657 2 92 2.0E-38 T 22-04-2016 YPO3873 fdcb6943822b008ea66287d84bdef0c1 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.1E-24 T 22-04-2016 YPO1103 c5b6e7f909936f593a6b04b0516ab47f 94 Pfam PF03658 RnfH family Ubiquitin 4 86 2.4E-34 T 22-04-2016 IPR005346 RnfH protein YPO1103 c5b6e7f909936f593a6b04b0516ab47f 94 Gene3D G3DSA:3.10.20.280 3 88 8.0E-37 T 22-04-2016 IPR005346 RnfH protein YPO1103 c5b6e7f909936f593a6b04b0516ab47f 94 PANTHER PTHR37483:SF1 1 93 4.3E-43 T 22-04-2016 YPO1103 c5b6e7f909936f593a6b04b0516ab47f 94 PANTHER PTHR37483 1 93 4.3E-43 T 22-04-2016 YPO1103 c5b6e7f909936f593a6b04b0516ab47f 94 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 25.914 T 22-04-2016 IPR005346 RnfH protein YPO1103 c5b6e7f909936f593a6b04b0516ab47f 94 SUPERFAMILY SSF54285 4 78 6.34E-26 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPO2214 0f85e307ff8050920902dae56d801a53 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 2.4E-6 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YPO2214 0f85e307ff8050920902dae56d801a53 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 1.0E-58 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YPO2214 0f85e307ff8050920902dae56d801a53 196 SUPERFAMILY SSF52540 7 196 2.66E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2214 0f85e307ff8050920902dae56d801a53 196 Gene3D G3DSA:3.40.50.300 3 196 9.3E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2214 0f85e307ff8050920902dae56d801a53 196 PANTHER PTHR30069 3 196 4.3E-70 T 22-04-2016 YPO2214 0f85e307ff8050920902dae56d801a53 196 PIRSF PIRSF015617 1 196 1.2E-67 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YPO2214 0f85e307ff8050920902dae56d801a53 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 4.3E-78 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 5.6E-104 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 SUPERFAMILY SSF56281 1 251 2.62E-67 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 5.1E-23 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 PANTHER PTHR11935:SF7 1 251 1.3E-99 T 22-04-2016 YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.336 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 6.0E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 Gene3D G3DSA:3.60.15.10 4 251 3.3E-81 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 PIRSF PIRSF005457 1 251 4.9E-89 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 SMART SM00849 11 165 7.6E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1079 97b97c42ebcdb4084ffe778d1f37915b 251 PANTHER PTHR11935 1 251 1.3E-99 T 22-04-2016 YPO3798 d50d25a3c39e53af28bfacb761191483 777 Pfam PF16967 Fimbrial, FimD or usher-like 276 343 1.0E-23 T 22-04-2016 IPR032636 Pilus assembly protein domain YPO1316 0c512fdb1df6b54e44e1d419e6d0b5ce 355 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 25 148 8.3E-36 T 22-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain YPO1316 0c512fdb1df6b54e44e1d419e6d0b5ce 355 PANTHER PTHR10209 23 347 1.9E-110 T 22-04-2016 YPO1316 0c512fdb1df6b54e44e1d419e6d0b5ce 355 PANTHER PTHR10209:SF146 23 347 1.9E-110 T 22-04-2016 YPO1316 0c512fdb1df6b54e44e1d419e6d0b5ce 355 Gene3D G3DSA:2.60.120.330 21 305 3.0E-88 T 22-04-2016 IPR027443 Isopenicillin N synthase-like YPO1316 0c512fdb1df6b54e44e1d419e6d0b5ce 355 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 197 293 8.6E-17 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 YPO1316 0c512fdb1df6b54e44e1d419e6d0b5ce 355 PRINTS PR00682 Isopenicillin N synthase signature 218 239 3.8E-11 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 YPO1316 0c512fdb1df6b54e44e1d419e6d0b5ce 355 PRINTS PR00682 Isopenicillin N synthase signature 254 280 3.8E-11 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 YPO1316 0c512fdb1df6b54e44e1d419e6d0b5ce 355 PRINTS PR00682 Isopenicillin N synthase signature 47 64 3.8E-11 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 YPO1316 0c512fdb1df6b54e44e1d419e6d0b5ce 355 SUPERFAMILY SSF51197 16 305 1.24E-81 T 22-04-2016 YPO2895 fb7a0275ed6f6692408bf6c1c1a2b07c 128 Gene3D G3DSA:3.90.1010.10 2 126 3.2E-55 T 22-04-2016 YPO2895 fb7a0275ed6f6692408bf6c1c1a2b07c 128 SUPERFAMILY SSF82649 1 125 4.45E-47 T 22-04-2016 YPO2895 fb7a0275ed6f6692408bf6c1c1a2b07c 128 PANTHER PTHR10093:SF3 1 128 1.7E-104 T 22-04-2016 YPO2895 fb7a0275ed6f6692408bf6c1c1a2b07c 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.8E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 YPO2895 fb7a0275ed6f6692408bf6c1c1a2b07c 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.0E-68 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 YPO2895 fb7a0275ed6f6692408bf6c1c1a2b07c 128 PANTHER PTHR10093 1 128 1.7E-104 T 22-04-2016 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.449 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 SUPERFAMILY SSF55681 8 292 4.91E-134 T 22-04-2016 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 1.2E-174 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 Gene3D G3DSA:1.20.58.180 215 298 7.9E-37 T 22-04-2016 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 Gene3D G3DSA:3.30.930.10 4 213 1.3E-105 T 22-04-2016 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 PANTHER PTHR30075 1 304 7.4E-280 T 22-04-2016 YPO4072 2a0f2bd1e7f38c94e65f09768b3120b2 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 2.9E-149 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YPO3151 7fcfa21ca326bf82df3ba3448281cc8d 135 SUPERFAMILY SSF54637 2 129 3.37E-36 T 22-04-2016 IPR029069 HotDog domain YPO3151 7fcfa21ca326bf82df3ba3448281cc8d 135 PANTHER PTHR31793 1 135 1.4E-104 T 22-04-2016 YPO3151 7fcfa21ca326bf82df3ba3448281cc8d 135 PIRSF PIRSF003230 1 134 7.1E-21 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YPO3151 7fcfa21ca326bf82df3ba3448281cc8d 135 PANTHER PTHR31793:SF8 1 135 1.4E-104 T 22-04-2016 YPO3151 7fcfa21ca326bf82df3ba3448281cc8d 135 Pfam PF13279 Thioesterase-like superfamily 12 125 6.0E-16 T 22-04-2016 YPO3151 7fcfa21ca326bf82df3ba3448281cc8d 135 Gene3D G3DSA:3.10.129.10 2 131 1.1E-40 T 22-04-2016 IPR029069 HotDog domain YPO3151 7fcfa21ca326bf82df3ba3448281cc8d 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 2.0E-28 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YPO1143 e9c8da64f33813583679035a3e8b0653 263 Gene3D G3DSA:2.40.50.100 119 183 3.0E-32 T 22-04-2016 YPO1143 e9c8da64f33813583679035a3e8b0653 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 112 6.8E-38 T 22-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal YPO1143 e9c8da64f33813583679035a3e8b0653 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 3.1E-26 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 YPO1143 e9c8da64f33813583679035a3e8b0653 263 SUPERFAMILY SSF50331 122 191 4.37E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO1143 e9c8da64f33813583679035a3e8b0653 263 Pfam PF03459 TOBE domain 198 258 5.9E-12 T 22-04-2016 IPR005116 Transport-associated OB, type 1 YPO1143 e9c8da64f33813583679035a3e8b0653 263 Pfam PF03459 TOBE domain 124 188 2.6E-15 T 22-04-2016 IPR005116 Transport-associated OB, type 1 YPO1143 e9c8da64f33813583679035a3e8b0653 263 PANTHER PTHR30432 1 263 1.4E-78 T 22-04-2016 YPO1143 e9c8da64f33813583679035a3e8b0653 263 PIRSF PIRSF005763 1 263 9.1E-95 T 22-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 YPO1143 e9c8da64f33813583679035a3e8b0653 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 2.6E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1143 e9c8da64f33813583679035a3e8b0653 263 SUPERFAMILY SSF50331 171 259 5.48E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO1143 e9c8da64f33813583679035a3e8b0653 263 Gene3D G3DSA:2.40.50.100 184 253 4.2E-20 T 22-04-2016 YPO1143 e9c8da64f33813583679035a3e8b0653 263 SUPERFAMILY SSF46785 2 103 7.62E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1143 e9c8da64f33813583679035a3e8b0653 263 Gene3D G3DSA:1.10.10.10 1 118 8.8E-45 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3988 25a1849de06a2af43b8172ccd015a6cc 276 Pfam PF00563 EAL domain 45 261 4.1E-26 T 22-04-2016 IPR001633 EAL domain YPO3988 25a1849de06a2af43b8172ccd015a6cc 276 Gene3D G3DSA:3.20.20.450 50 267 6.3E-22 T 22-04-2016 IPR001633 EAL domain YPO3988 25a1849de06a2af43b8172ccd015a6cc 276 SUPERFAMILY SSF141868 44 269 9.02E-29 T 22-04-2016 IPR001633 EAL domain YPO3988 25a1849de06a2af43b8172ccd015a6cc 276 PANTHER PTHR33121:SF6 1 262 1.1E-126 T 22-04-2016 YPO3988 25a1849de06a2af43b8172ccd015a6cc 276 PANTHER PTHR33121 1 262 1.1E-126 T 22-04-2016 YPO3988 25a1849de06a2af43b8172ccd015a6cc 276 SMART SM00052 21 266 1.6E-11 T 22-04-2016 IPR001633 EAL domain YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:1.10.150.300 131 200 4.8E-29 T 22-04-2016 IPR023192 TGS-like domain YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:3.40.50.300 4 130 4.5E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:3.40.50.300 201 267 4.5E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 3.6E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 PIRSF PIRSF006641 1 363 1.8E-157 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.2E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 SUPERFAMILY SSF81271 279 359 6.1E-36 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 Gene3D G3DSA:3.10.20.30 268 363 8.9E-50 T 22-04-2016 IPR012675 Beta-grasp domain YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 SUPERFAMILY SSF52540 3 301 4.5E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.0E-174 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 PANTHER PTHR23305 1 363 1.5E-215 T 22-04-2016 YPO2010 6a366f01dea9f29b07f10c2fb0395016 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.741 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 YPO0667 06cf6250718d16be8c95099d7fac627f 194 PANTHER PTHR35602:SF3 1 194 3.0E-130 T 22-04-2016 YPO0667 06cf6250718d16be8c95099d7fac627f 194 SUPERFAMILY SSF53474 4 189 2.25E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0667 06cf6250718d16be8c95099d7fac627f 194 PANTHER PTHR35602 1 194 3.0E-130 T 22-04-2016 YPO0667 06cf6250718d16be8c95099d7fac627f 194 Gene3D G3DSA:3.40.50.1820 4 180 1.3E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0667 06cf6250718d16be8c95099d7fac627f 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 189 6.6E-69 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPO1475 c678a0d6d03708c1ac423fab450c7c3f 86 PANTHER PTHR32305 1 86 2.9E-42 T 22-04-2016 YPO1475 c678a0d6d03708c1ac423fab450c7c3f 86 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 1 56 2.2E-17 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.4E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 PANTHER PTHR10772 1 96 2.5E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.991 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 Gene3D G3DSA:2.30.33.40 1 96 4.1E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 SMART SM00883 2 95 1.1E-48 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YPO0350 03d2438c4a87a8801d6649c3c51a021d 97 SUPERFAMILY SSF50129 1 96 3.06E-31 T 22-04-2016 IPR011032 GroES-like YPO0071 3041a067c6432df7fbb21df9ac446e74 162 PANTHER PTHR12029:SF31 1 158 3.2E-79 T 22-04-2016 YPO0071 3041a067c6432df7fbb21df9ac446e74 162 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 34.168 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPO0071 3041a067c6432df7fbb21df9ac446e74 162 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 6.0E-71 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPO0071 3041a067c6432df7fbb21df9ac446e74 162 Gene3D G3DSA:3.40.1280.10 1 160 5.6E-72 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0071 3041a067c6432df7fbb21df9ac446e74 162 PANTHER PTHR12029 1 158 3.2E-79 T 22-04-2016 YPO0071 3041a067c6432df7fbb21df9ac446e74 162 SUPERFAMILY SSF75217 1 157 7.19E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPO0071 3041a067c6432df7fbb21df9ac446e74 162 PIRSF PIRSF029256 1 159 3.1E-71 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPO0071 3041a067c6432df7fbb21df9ac446e74 162 Pfam PF00588 SpoU rRNA Methylase family 2 147 7.0E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 SMART SM00342 185 268 5.6E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 Pfam PF07883 Cupin domain 25 77 1.4E-6 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 Gene3D G3DSA:1.10.10.60 220 271 9.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 PANTHER PTHR11019:SF120 1 276 1.1E-176 T 22-04-2016 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 PANTHER PTHR11019 1 276 1.1E-176 T 22-04-2016 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 Pfam PF12833 Helix-turn-helix domain 196 269 1.1E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 3.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 3.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 SUPERFAMILY SSF46689 221 272 1.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 SUPERFAMILY SSF51182 8 90 4.27E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO2681 6d6b712dc3f604988f6ab86acce4e0bb 280 Gene3D G3DSA:2.60.120.10 26 92 4.9E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO0034 6525fe1969ce4d0001b0ff8be0ce55dd 461 PANTHER PTHR11119:SF44 1 461 3.6E-288 T 22-04-2016 YPO0034 6525fe1969ce4d0001b0ff8be0ce55dd 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YPO0034 6525fe1969ce4d0001b0ff8be0ce55dd 461 PANTHER PTHR11119 1 461 3.6E-288 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO0034 6525fe1969ce4d0001b0ff8be0ce55dd 461 TIGRFAM TIGR03173 pbuX: xanthine permease 38 458 6.6E-127 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 YPO0034 6525fe1969ce4d0001b0ff8be0ce55dd 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 28 456 1.1E-139 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YPO0034 6525fe1969ce4d0001b0ff8be0ce55dd 461 Pfam PF00860 Permease family 33 425 1.7E-108 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO1817 7278e2de0ebb191db8bb38d7f82a67cd 139 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 131 4.2E-35 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system YPO1817 7278e2de0ebb191db8bb38d7f82a67cd 139 PANTHER PTHR34873:SF2 2 139 2.0E-78 T 22-04-2016 YPO1817 7278e2de0ebb191db8bb38d7f82a67cd 139 SUPERFAMILY SSF143100 2 67 4.71E-10 T 22-04-2016 YPO1817 7278e2de0ebb191db8bb38d7f82a67cd 139 Gene3D G3DSA:1.10.1220.10 96 137 1.1E-5 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YPO1817 7278e2de0ebb191db8bb38d7f82a67cd 139 PANTHER PTHR34873 2 139 2.0E-78 T 22-04-2016 YPO3240 4956da40c904dbfea7fdf143b036f4ab 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 2.5E-189 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YPO3240 4956da40c904dbfea7fdf143b036f4ab 447 PANTHER PTHR37839 1 447 1.9E-234 T 22-04-2016 YPO3240 4956da40c904dbfea7fdf143b036f4ab 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 47.358 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YPO3240 4956da40c904dbfea7fdf143b036f4ab 447 Pfam PF11973 NQRA C-terminal domain 262 310 5.2E-22 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 YPO3240 4956da40c904dbfea7fdf143b036f4ab 447 PANTHER PTHR37839:SF1 1 447 1.9E-234 T 22-04-2016 YPO3240 4956da40c904dbfea7fdf143b036f4ab 447 Gene3D G3DSA:2.40.50.100 42 80 1.5E-4 T 22-04-2016 YPO3240 4956da40c904dbfea7fdf143b036f4ab 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 4.2E-120 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.9E-15 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 SUPERFAMILY SSF52540 1 212 1.67E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 Pfam PF00406 Adenylate kinase 5 185 5.6E-60 T 22-04-2016 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.104 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.9E-75 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 PANTHER PTHR23359 1 213 4.4E-110 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 Gene3D G3DSA:3.40.50.300 1 212 1.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 156 171 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 173 187 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 32 46 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 4 17 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO3118 e3d67f84f33b1e03915aa37cee641e97 214 PRINTS PR00094 Adenylate kinase signature 81 97 7.2E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YPO2955 ed96920654971d575a07372a7a9dc509 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 172 2.12E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2955 ed96920654971d575a07372a7a9dc509 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 130 144 2.12E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2955 ed96920654971d575a07372a7a9dc509 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 160 2.12E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2955 ed96920654971d575a07372a7a9dc509 200 SUPERFAMILY SSF46894 115 185 2.41E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO2955 ed96920654971d575a07372a7a9dc509 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 144 171 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2955 ed96920654971d575a07372a7a9dc509 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 184 3.2E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2955 ed96920654971d575a07372a7a9dc509 200 SMART SM00421 127 184 6.3E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2955 ed96920654971d575a07372a7a9dc509 200 Gene3D G3DSA:1.10.10.10 129 184 1.1E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2824 2878b653f957cd700013190623ede902 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.7E-67 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 PANTHER PTHR10025 1 287 2.2E-176 T 22-04-2016 YPO2824 2878b653f957cd700013190623ede902 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 7.0E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 SUPERFAMILY SSF51735 123 285 1.39E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2824 2878b653f957cd700013190623ede902 288 Gene3D G3DSA:3.40.192.10 7 139 3.3E-50 T 22-04-2016 YPO2824 2878b653f957cd700013190623ede902 288 Gene3D G3DSA:3.40.50.720 140 264 1.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2824 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.3E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO2824 2878b653f957cd700013190623ede902 288 SUPERFAMILY SSF53223 3 122 1.15E-39 T 22-04-2016 YPO2824 2878b653f957cd700013190623ede902 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.244 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 PANTHER PTHR11938:SF85 3 160 1.8E-81 T 22-04-2016 YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 SUPERFAMILY SSF54862 3 200 2.3E-68 T 22-04-2016 YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 PANTHER PTHR11938 3 160 1.8E-81 T 22-04-2016 YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 Pfam PF13247 4Fe-4S dicluster domain 59 152 7.2E-27 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 5.9E-78 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 Gene3D G3DSA:3.30.70.20 4 74 1.0E-29 T 22-04-2016 YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 Gene3D G3DSA:3.30.70.20 126 186 1.0E-29 T 22-04-2016 YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 Gene3D G3DSA:3.30.70.20 75 125 3.2E-25 T 22-04-2016 YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3324 fe7632104c811f9eaf7fb256c1150e3d 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0022 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3939 e96d29eb08061bb34e11d3e35610cece 476 Pfam PF00534 Glycosyl transferases group 1 287 448 8.4E-16 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YPO3939 e96d29eb08061bb34e11d3e35610cece 476 Pfam PF08323 Starch synthase catalytic domain 2 233 1.9E-70 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3939 e96d29eb08061bb34e11d3e35610cece 476 PANTHER PTHR12526 1 476 3.1E-157 T 22-04-2016 YPO3939 e96d29eb08061bb34e11d3e35610cece 476 Gene3D G3DSA:3.40.50.2000 250 457 1.7E-71 T 22-04-2016 YPO3939 e96d29eb08061bb34e11d3e35610cece 476 SUPERFAMILY SSF53756 1 476 5.23E-116 T 22-04-2016 YPO3939 e96d29eb08061bb34e11d3e35610cece 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 45.804 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3939 e96d29eb08061bb34e11d3e35610cece 476 PANTHER PTHR12526:SF17 1 476 3.1E-157 T 22-04-2016 YPO3939 e96d29eb08061bb34e11d3e35610cece 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 1.4E-168 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 YPO0282 e65cdfcf7bb3517903ed531e72e8a32e 345 Gene3D G3DSA:3.40.1570.10 5 143 3.2E-7 T 22-04-2016 YPO0282 e65cdfcf7bb3517903ed531e72e8a32e 345 Gene3D G3DSA:3.40.1570.10 191 340 4.8E-7 T 22-04-2016 YPO0282 e65cdfcf7bb3517903ed531e72e8a32e 345 SUPERFAMILY SSF144064 4 339 1.28E-132 T 22-04-2016 YPO0282 e65cdfcf7bb3517903ed531e72e8a32e 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 207 338 3.2E-40 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YPO0282 e65cdfcf7bb3517903ed531e72e8a32e 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 5.2E-44 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YPO3521 7d38206f9287b25ac9b17ec19e539a06 175 SUPERFAMILY SSF50324 3 175 4.45E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPO3521 7d38206f9287b25ac9b17ec19e539a06 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.024 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPO3521 7d38206f9287b25ac9b17ec19e539a06 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.0E-54 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPO3521 7d38206f9287b25ac9b17ec19e539a06 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPO3521 7d38206f9287b25ac9b17ec19e539a06 175 Gene3D G3DSA:3.90.80.10 4 174 1.2E-61 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPO3521 7d38206f9287b25ac9b17ec19e539a06 175 PANTHER PTHR10286 6 175 4.5E-80 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YPO1725 f8450f791942bcdc9b2344171f4459c0 278 Pfam PF04962 KduI/IolB family 36 272 1.3E-32 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPO1725 f8450f791942bcdc9b2344171f4459c0 278 PIRSF PIRSF006625 1 278 2.7E-136 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPO1725 f8450f791942bcdc9b2344171f4459c0 278 SUPERFAMILY SSF51182 1 262 1.2E-107 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO1725 f8450f791942bcdc9b2344171f4459c0 278 Gene3D G3DSA:2.60.120.520 20 132 6.1E-55 T 22-04-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPO1725 f8450f791942bcdc9b2344171f4459c0 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 56.325 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPO1725 f8450f791942bcdc9b2344171f4459c0 278 PANTHER PTHR38461 1 278 7.9E-184 T 22-04-2016 YPO1725 f8450f791942bcdc9b2344171f4459c0 278 Gene3D G3DSA:2.60.120.500 133 278 3.4E-78 T 22-04-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPO0966 00f0d392fcdf4e8e25f051fc09c965ca 765 SUPERFAMILY SSF51261 31 158 1.2E-6 T 22-04-2016 IPR011055 Duplicated hybrid motif YPO0966 00f0d392fcdf4e8e25f051fc09c965ca 765 Pfam PF01551 Peptidase family M23 42 155 4.1E-6 T 22-04-2016 IPR016047 Peptidase M23 YPO0966 00f0d392fcdf4e8e25f051fc09c965ca 765 SUPERFAMILY SSF53955 503 573 9.84E-10 T 22-04-2016 IPR023346 Lysozyme-like domain YPO0966 00f0d392fcdf4e8e25f051fc09c965ca 765 SUPERFAMILY SSF53955 618 657 9.84E-10 T 22-04-2016 IPR023346 Lysozyme-like domain YPO0966 00f0d392fcdf4e8e25f051fc09c965ca 765 Gene3D G3DSA:2.70.70.10 30 158 1.9E-11 T 22-04-2016 YPO3586 a244dc774694a26f5d2637ed2bd321f3 284 PANTHER PTHR30448:SF0 1 283 1.5E-157 T 22-04-2016 YPO3586 a244dc774694a26f5d2637ed2bd321f3 284 Gene3D G3DSA:3.40.50.300 2 150 8.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3586 a244dc774694a26f5d2637ed2bd321f3 284 SUPERFAMILY SSF52540 2 151 3.19E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3586 a244dc774694a26f5d2637ed2bd321f3 284 Pfam PF03668 P-loop ATPase protein family 1 282 5.9E-144 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 YPO3586 a244dc774694a26f5d2637ed2bd321f3 284 PANTHER PTHR30448 1 283 1.5E-157 T 22-04-2016 YPO3586 a244dc774694a26f5d2637ed2bd321f3 284 PIRSF PIRSF005052 1 284 4.7E-114 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 YPO3586 a244dc774694a26f5d2637ed2bd321f3 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.858 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 PANTHER PTHR11548 1 264 6.0E-199 T 22-04-2016 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 Gene3D G3DSA:3.30.572.10 1 264 1.1E-133 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 SUPERFAMILY SSF55831 1 264 4.84E-130 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.846 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 Pfam PF00303 Thymidylate synthase 2 264 1.1E-123 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.7E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 4.5E-92 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 5.1E-42 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO0783 83eb5779d3616cffcfc04fa29914974e 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YPO3134 4d1b569e45e8ac9bba0db94d70e5cf39 86 SUPERFAMILY SSF143800 1 80 4.32E-21 T 22-04-2016 YPO3134 4d1b569e45e8ac9bba0db94d70e5cf39 86 PANTHER PTHR33280:SF3 1 81 5.8E-43 T 22-04-2016 YPO3134 4d1b569e45e8ac9bba0db94d70e5cf39 86 Pfam PF01197 Ribosomal protein L31 1 78 1.6E-23 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3134 4d1b569e45e8ac9bba0db94d70e5cf39 86 PANTHER PTHR33280 1 81 5.8E-43 T 22-04-2016 YPO3134 4d1b569e45e8ac9bba0db94d70e5cf39 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.48 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3134 4d1b569e45e8ac9bba0db94d70e5cf39 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.5E-15 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3134 4d1b569e45e8ac9bba0db94d70e5cf39 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.9E-13 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3134 4d1b569e45e8ac9bba0db94d70e5cf39 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.9E-13 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3134 4d1b569e45e8ac9bba0db94d70e5cf39 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-13 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0252 8f293858e06a2914bfd0dd76561ef50d 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 3.3E-34 T 22-04-2016 IPR007436 Protein of unknown function DUF485 YPO0252 8f293858e06a2914bfd0dd76561ef50d 103 PANTHER PTHR38598 2 103 3.5E-50 T 22-04-2016 YPO0505 5185f8463fe407e4652ed29c9b8be55a 327 PANTHER PTHR35564 1 326 1.3E-143 T 22-04-2016 YPO0505 5185f8463fe407e4652ed29c9b8be55a 327 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 312 1.1E-52 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPO0505 5185f8463fe407e4652ed29c9b8be55a 327 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 19 312 4.7E-59 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPO0505 5185f8463fe407e4652ed29c9b8be55a 327 PANTHER PTHR35564:SF2 1 326 1.3E-143 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Gene3D G3DSA:3.40.50.740 621 668 9.5E-77 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Gene3D G3DSA:3.40.50.740 399 575 9.5E-77 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Gene3D G3DSA:3.40.50.740 96 178 9.5E-77 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 SMART SM00926 39 93 1.2E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Pfam PF00384 Molybdopterin oxidoreductase 96 568 1.3E-88 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.4E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Hamap MF_01630 Nitrate reductase [napA]. 1 828 29.814 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Gene3D G3DSA:3.40.228.10 325 398 1.4E-56 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Gene3D G3DSA:3.40.228.10 179 291 1.4E-56 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 24 1.9E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Gene3D G3DSA:2.20.25.90 38 95 9.2E-21 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 PANTHER PTHR11615 39 284 0.0 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 PANTHER PTHR11615 643 828 0.0 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 PANTHER PTHR11615 345 596 0.0 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 PANTHER PTHR11615:SF123 39 284 0.0 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 PANTHER PTHR11615:SF123 643 828 0.0 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 PANTHER PTHR11615:SF123 345 596 0.0 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Gene3D G3DSA:2.40.40.20 669 828 2.2E-45 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 SUPERFAMILY SSF53706 37 700 2.09E-201 T 22-04-2016 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 92 1.4E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 1.5E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO3038 c08078f9723fc4a544e85c76fb4ba24d 830 SUPERFAMILY SSF50692 688 828 3.62E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPO1526 9c8f6948af758f8f4cf9138c91fa2689 618 PANTHER PTHR30441:SF4 1 618 1.1E-226 T 22-04-2016 YPO1526 9c8f6948af758f8f4cf9138c91fa2689 618 Pfam PF13502 AsmA-like C-terminal region 359 547 9.3E-21 T 22-04-2016 IPR032712 AsmA-like, C-terminal YPO1526 9c8f6948af758f8f4cf9138c91fa2689 618 PANTHER PTHR30441 1 618 1.1E-226 T 22-04-2016 YPO1526 9c8f6948af758f8f4cf9138c91fa2689 618 Pfam PF05170 AsmA family 2 233 9.3E-22 T 22-04-2016 IPR007844 AsmA YPO2711 5f1094738f6cca4777a1a31598f0e882 191 Pfam PF08281 Sigma-70, region 4 129 180 7.3E-19 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO2711 5f1094738f6cca4777a1a31598f0e882 191 PANTHER PTHR30173 1 186 4.3E-55 T 22-04-2016 YPO2711 5f1094738f6cca4777a1a31598f0e882 191 Gene3D G3DSA:1.10.10.10 122 187 6.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2711 5f1094738f6cca4777a1a31598f0e882 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 1.1E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO2711 5f1094738f6cca4777a1a31598f0e882 191 PANTHER PTHR30173:SF1 1 186 4.3E-55 T 22-04-2016 YPO2711 5f1094738f6cca4777a1a31598f0e882 191 Gene3D G3DSA:1.10.1740.10 2 109 3.5E-36 T 22-04-2016 YPO2711 5f1094738f6cca4777a1a31598f0e882 191 SUPERFAMILY SSF88659 122 183 1.63E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO2711 5f1094738f6cca4777a1a31598f0e882 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 1.4E-99 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO2711 5f1094738f6cca4777a1a31598f0e882 191 SUPERFAMILY SSF88946 2 103 6.75E-30 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO2711 5f1094738f6cca4777a1a31598f0e882 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO2711 5f1094738f6cca4777a1a31598f0e882 191 Pfam PF04542 Sigma-70 region 2 25 91 1.2E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82866 297 499 5.49E-45 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82693 38 131 1.96E-26 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82714 717 803 1.7E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 Gene3D G3DSA:3.30.2090.10 182 276 8.0E-28 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82693 564 666 4.19E-27 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82866 826 1021 4.71E-46 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PANTHER PTHR32063:SF27 1 1039 0.0 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 Gene3D G3DSA:1.20.1640.10 292 503 5.0E-54 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82693 136 182 9.07E-23 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82693 275 331 9.07E-23 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PANTHER PTHR32063 1 1039 0.0 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82714 183 273 4.45E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 Gene3D G3DSA:3.30.70.1430 566 666 1.5E-29 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 7.4E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 Gene3D G3DSA:3.30.2090.10 717 800 2.1E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 Gene3D G3DSA:1.10.3850.10 808 1023 1.8E-58 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82693 803 852 4.45E-25 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 SUPERFAMILY SSF82693 667 716 4.45E-25 T 22-04-2016 YPO1001 500abd7ec4d7fc9d6ecc6d1c9438f620 1039 Gene3D G3DSA:3.30.70.1430 38 137 2.5E-32 T 22-04-2016 YPO0365 c5f046db7128b2ea4f0c810acf33dc2b 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 72 334 1.9E-92 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 YPO0365 c5f046db7128b2ea4f0c810acf33dc2b 350 Gene3D G3DSA:3.40.50.300 114 275 5.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0365 c5f046db7128b2ea4f0c810acf33dc2b 350 PANTHER PTHR32120 3 350 1.0E-170 T 22-04-2016 YPO0365 c5f046db7128b2ea4f0c810acf33dc2b 350 PANTHER PTHR32120:SF2 3 350 1.0E-170 T 22-04-2016 YPO0365 c5f046db7128b2ea4f0c810acf33dc2b 350 SUPERFAMILY SSF52540 113 340 5.74E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0365 c5f046db7128b2ea4f0c810acf33dc2b 350 Gene3D G3DSA:1.10.40.50 276 344 1.1E-27 T 22-04-2016 YPO0365 c5f046db7128b2ea4f0c810acf33dc2b 350 Pfam PF03193 Protein of unknown function, DUF258 99 276 2.3E-54 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 YPO0365 c5f046db7128b2ea4f0c810acf33dc2b 350 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 39 340 37.237 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 YPO3279 5565edec86bfc43d6dbc973239766659 120 SUPERFAMILY SSF69754 3 107 1.57E-31 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPO3279 5565edec86bfc43d6dbc973239766659 120 PANTHER PTHR33231 1 117 1.7E-74 T 22-04-2016 YPO3279 5565edec86bfc43d6dbc973239766659 120 PANTHER PTHR33231:SF3 1 117 1.7E-74 T 22-04-2016 YPO3279 5565edec86bfc43d6dbc973239766659 120 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 2.6E-32 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPO3279 5565edec86bfc43d6dbc973239766659 120 Gene3D G3DSA:3.30.160.100 3 91 1.2E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPO3279 5565edec86bfc43d6dbc973239766659 120 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.0E-20 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PANTHER PTHR32063 1 1043 0.0 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 Gene3D G3DSA:3.30.2090.10 723 811 6.8E-26 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3133 d3feee73d064470cea55564f2ba10150 1050 Gene3D G3DSA:3.30.70.1430 38 139 2.3E-35 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 Gene3D G3DSA:1.10.3850.10 278 498 1.8E-62 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 Gene3D G3DSA:1.10.3850.10 816 1030 7.9E-56 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 SUPERFAMILY SSF82693 274 330 1.74E-28 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 SUPERFAMILY SSF82693 135 182 1.74E-28 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 SUPERFAMILY SSF82714 182 272 2.09E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3133 d3feee73d064470cea55564f2ba10150 1050 SUPERFAMILY SSF82714 724 811 1.31E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3133 d3feee73d064470cea55564f2ba10150 1050 SUPERFAMILY SSF82866 296 497 4.97E-49 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1043 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YPO3133 d3feee73d064470cea55564f2ba10150 1050 SUPERFAMILY SSF82693 38 132 8.11E-27 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 SUPERFAMILY SSF82693 566 670 8.37E-32 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 Gene3D G3DSA:3.30.70.1430 568 670 2.9E-39 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PANTHER PTHR32063:SF13 1 1043 0.0 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 SUPERFAMILY SSF82866 807 1032 2.09E-44 T 22-04-2016 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 6.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3133 d3feee73d064470cea55564f2ba10150 1050 Gene3D G3DSA:3.30.2090.10 181 275 1.2E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3971 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:3.40.192.10 68 188 3.9E-61 T 22-04-2016 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 PANTHER PTHR11606:SF4 7 447 8.3E-246 T 22-04-2016 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:3.40.50.720 209 372 4.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3971 8071908ddfd9824af202c5fca1776d5d 447 SUPERFAMILY SSF51735 202 446 5.09E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3971 8071908ddfd9824af202c5fca1776d5d 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 2.9E-85 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 3.6E-51 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:1.10.285.10 373 446 8.8E-26 T 22-04-2016 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 Gene3D G3DSA:1.10.285.10 7 67 6.7E-28 T 22-04-2016 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 SMART SM00839 204 445 6.6E-91 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 SUPERFAMILY SSF53223 6 196 5.12E-74 T 22-04-2016 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 PANTHER PTHR11606 7 447 8.3E-246 T 22-04-2016 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 PIRSF PIRSF000185 22 447 7.3E-114 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPO3971 8071908ddfd9824af202c5fca1776d5d 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 Gene3D G3DSA:3.20.20.120 117 319 7.0E-60 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 SMART SM00922 130 223 6.4E-17 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 PANTHER PTHR13794:SF60 4 321 1.4E-146 T 22-04-2016 YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 SUPERFAMILY SSF51604 118 319 4.19E-52 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 Gene3D G3DSA:3.30.390.10 1 100 9.9E-39 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 109 4.5E-13 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 Pfam PF13378 Enolase C-terminal domain-like 136 320 2.2E-23 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 PANTHER PTHR13794 4 321 1.4E-146 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YPO2341 c5126cdc45a4694a0df6d99c2af0354b 324 SUPERFAMILY SSF54826 3 109 5.5E-27 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 PANTHER PTHR10196 1 516 1.6E-184 T 22-04-2016 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 372 392 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 246 2.7E-62 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 SUPERFAMILY SSF53067 248 506 3.56E-61 T 22-04-2016 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 PIRSF PIRSF000538 1 513 8.0E-142 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 PANTHER PTHR10196:SF67 1 516 1.6E-184 T 22-04-2016 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 Gene3D G3DSA:3.30.420.40 249 507 1.1E-54 T 22-04-2016 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 460 7.7E-31 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 TIGRFAM TIGR01312 XylB: xylulokinase 5 501 6.6E-146 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 Gene3D G3DSA:3.30.420.40 2 246 2.5E-63 T 22-04-2016 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 131 143 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO1291 ddef651824ecb8d185dffbbd12ff165b 517 SUPERFAMILY SSF53067 4 249 7.87E-69 T 22-04-2016 YPO1702 d45297d108b4d58f893bc8c31257c89f 450 PANTHER PTHR30462 1 450 3.2E-298 T 22-04-2016 YPO1702 d45297d108b4d58f893bc8c31257c89f 450 PANTHER PTHR30462:SF1 1 450 3.2E-298 T 22-04-2016 YPO1702 d45297d108b4d58f893bc8c31257c89f 450 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 41 440 9.3E-172 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 YPO1702 d45297d108b4d58f893bc8c31257c89f 450 Pfam PF04403 Paraquat-inducible protein A 88 239 3.5E-38 T 22-04-2016 IPR007498 Paraquat-inducible protein A YPO1702 d45297d108b4d58f893bc8c31257c89f 450 Pfam PF04403 Paraquat-inducible protein A 285 441 1.3E-46 T 22-04-2016 IPR007498 Paraquat-inducible protein A YPO2693 ad8ea47039d46715114b18f06d1a3a12 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 5.5E-35 T 22-04-2016 IPR019663 Uncharacterised protein YbfA YPO0455 66ceb75f8fd65fc058d46a72ec56d96a 215 SMART SM00855 3 157 2.4E-23 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPO0455 66ceb75f8fd65fc058d46a72ec56d96a 215 Gene3D G3DSA:3.40.50.1240 2 208 7.7E-62 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO0455 66ceb75f8fd65fc058d46a72ec56d96a 215 SUPERFAMILY SSF53254 1 209 4.06E-58 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO0455 66ceb75f8fd65fc058d46a72ec56d96a 215 PANTHER PTHR23029 1 215 2.9E-162 T 22-04-2016 YPO0455 66ceb75f8fd65fc058d46a72ec56d96a 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 YPO0455 66ceb75f8fd65fc058d46a72ec56d96a 215 PANTHER PTHR23029:SF53 1 215 2.9E-162 T 22-04-2016 YPO0455 66ceb75f8fd65fc058d46a72ec56d96a 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 51.058 T 22-04-2016 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 UniPathway: UPA00109 YPO0455 66ceb75f8fd65fc058d46a72ec56d96a 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.1E-58 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.3E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.3E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 SUPERFAMILY SSF47413 3 60 6.38E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Gene3D G3DSA:3.40.50.2300 174 278 1.9E-36 T 22-04-2016 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 315 2.1E-152 T 22-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 SUPERFAMILY SSF53822 63 316 3.34E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Gene3D G3DSA:1.10.260.40 6 56 3.5E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 SMART SM00354 4 74 2.8E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PANTHER PTHR30146:SF42 4 317 2.1E-225 T 22-04-2016 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Gene3D G3DSA:3.40.50.2300 57 173 5.1E-22 T 22-04-2016 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Pfam PF13377 Periplasmic binding protein-like domain 168 317 1.4E-15 T 22-04-2016 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 PANTHER PTHR30146 4 317 2.1E-225 T 22-04-2016 YPO3698 cf9cd4000d653d9fd700d9d75f0ce0b7 317 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.6E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO1309 b6fe9c8225165a59c033ffa61780e270 503 PIRSF PIRSF006060 3 495 1.3E-82 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1309 b6fe9c8225165a59c033ffa61780e270 503 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPO1309 b6fe9c8225165a59c033ffa61780e270 503 Pfam PF00324 Amino acid permease 25 478 5.2E-143 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPO1309 b6fe9c8225165a59c033ffa61780e270 503 PANTHER PTHR11785:SF204 11 503 1.0E-239 T 22-04-2016 YPO1309 b6fe9c8225165a59c033ffa61780e270 503 PANTHER PTHR11785 11 503 1.0E-239 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO0549 612b85499098e9a788e90cd4be9dd7c6 587 PANTHER PTHR30627 7 586 2.8E-255 T 22-04-2016 YPO0549 612b85499098e9a788e90cd4be9dd7c6 587 Gene3D G3DSA:3.90.1310.10 141 241 6.5E-31 T 22-04-2016 YPO0549 612b85499098e9a788e90cd4be9dd7c6 587 PANTHER PTHR30627:SF1 7 586 2.8E-255 T 22-04-2016 YPO0549 612b85499098e9a788e90cd4be9dd7c6 587 SUPERFAMILY SSF56601 234 562 1.18E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0549 612b85499098e9a788e90cd4be9dd7c6 587 Gene3D G3DSA:3.40.710.10 242 559 3.5E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0549 612b85499098e9a788e90cd4be9dd7c6 587 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 2.7E-18 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YPO0549 612b85499098e9a788e90cd4be9dd7c6 587 SUPERFAMILY SSF56519 62 233 9.42E-45 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YPO0549 612b85499098e9a788e90cd4be9dd7c6 587 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 553 1.2E-79 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPO2882 b1805388a2a3012c6b3595b3a2747709 398 Pfam PF04055 Radical SAM superfamily 134 303 1.0E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO2882 b1805388a2a3012c6b3595b3a2747709 398 PIRSF PIRSF006004 24 391 4.3E-147 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO2882 b1805388a2a3012c6b3595b3a2747709 398 SUPERFAMILY SSF102114 130 348 5.1E-15 T 22-04-2016 YPO2882 b1805388a2a3012c6b3595b3a2747709 398 PANTHER PTHR30544 1 398 3.1E-215 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO2882 b1805388a2a3012c6b3595b3a2747709 398 Gene3D G3DSA:3.20.20.70 131 336 3.1E-17 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2882 b1805388a2a3012c6b3595b3a2747709 398 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 31 378 74.814 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO2882 b1805388a2a3012c6b3595b3a2747709 398 PANTHER PTHR30544:SF5 1 398 3.1E-215 T 22-04-2016 YPO2882 b1805388a2a3012c6b3595b3a2747709 398 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 29 383 7.6E-171 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO1651 8be59577c7436779124a35e753f33fa4 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 8.6E-13 T 22-04-2016 YPO1651 8be59577c7436779124a35e753f33fa4 149 Pfam PF01037 Lrp/AsnC ligand binding domain 67 131 1.4E-10 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO1651 8be59577c7436779124a35e753f33fa4 149 Gene3D G3DSA:1.10.10.10 1 51 1.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1651 8be59577c7436779124a35e753f33fa4 149 SUPERFAMILY SSF46785 1 61 5.96E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1651 8be59577c7436779124a35e753f33fa4 149 Gene3D G3DSA:3.30.70.920 54 123 5.0E-13 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO1651 8be59577c7436779124a35e753f33fa4 149 SMART SM00344 1 107 2.1E-25 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YPO1651 8be59577c7436779124a35e753f33fa4 149 PANTHER PTHR30154:SF14 1 149 7.7E-110 T 22-04-2016 YPO1651 8be59577c7436779124a35e753f33fa4 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.1E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO1651 8be59577c7436779124a35e753f33fa4 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.1E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO1651 8be59577c7436779124a35e753f33fa4 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.1E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO1651 8be59577c7436779124a35e753f33fa4 149 PANTHER PTHR30154 1 149 7.7E-110 T 22-04-2016 YPO1651 8be59577c7436779124a35e753f33fa4 149 SUPERFAMILY SSF54909 62 136 8.4E-14 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO0519 c647ae4bef35264332401bcefab4ff42 255 PANTHER PTHR30353 1 255 4.0E-199 T 22-04-2016 IPR032818 DedA family YPO0519 c647ae4bef35264332401bcefab4ff42 255 Pfam PF09335 SNARE associated Golgi protein 36 159 1.8E-19 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPO0519 c647ae4bef35264332401bcefab4ff42 255 PANTHER PTHR30353:SF7 1 255 4.0E-199 T 22-04-2016 YPO3228 72272fc65561a0418504a00f0636fb93 303 Pfam PF03466 LysR substrate binding domain 96 251 4.6E-6 T 22-04-2016 IPR005119 LysR, substrate-binding YPO3228 72272fc65561a0418504a00f0636fb93 303 SUPERFAMILY SSF46785 7 84 8.95E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3228 72272fc65561a0418504a00f0636fb93 303 Gene3D G3DSA:1.10.10.10 6 83 3.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3228 72272fc65561a0418504a00f0636fb93 303 PANTHER PTHR30126 2 251 2.3E-76 T 22-04-2016 YPO3228 72272fc65561a0418504a00f0636fb93 303 SUPERFAMILY SSF53850 101 255 1.71E-7 T 22-04-2016 YPO3228 72272fc65561a0418504a00f0636fb93 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3228 72272fc65561a0418504a00f0636fb93 303 PANTHER PTHR30126:SF13 2 251 2.3E-76 T 22-04-2016 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PANTHER PTHR30477:SF12 11 319 3.3E-174 T 22-04-2016 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PANTHER PTHR30477 11 319 3.3E-174 T 22-04-2016 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 SUPERFAMILY SSF53807 51 322 2.06E-91 T 22-04-2016 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 Gene3D G3DSA:3.40.50.1980 48 200 3.0E-53 T 22-04-2016 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 Pfam PF01297 Zinc-uptake complex component A periplasmic 56 319 4.1E-80 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 Gene3D G3DSA:3.40.50.1980 201 322 1.5E-42 T 22-04-2016 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00690 Adhesin family signature 287 306 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00690 Adhesin family signature 208 229 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00690 Adhesin family signature 261 279 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00690 Adhesin family signature 84 97 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00690 Adhesin family signature 97 114 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00690 Adhesin family signature 53 71 1.7E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00691 Adhesin B signature 279 297 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00691 Adhesin B signature 234 252 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00691 Adhesin B signature 53 74 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00691 Adhesin B signature 78 96 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00691 Adhesin B signature 208 225 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00691 Adhesin B signature 97 116 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPO2439 14f809100f3b4c93a00d54536cfc00a3 323 PRINTS PR00691 Adhesin B signature 257 274 2.1E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YPO3562 c11ac3d021a69d95fa331dab2f8bbc12 130 SUPERFAMILY SSF54211 5 130 2.69E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3562 c11ac3d021a69d95fa331dab2f8bbc12 130 Gene3D G3DSA:3.30.230.10 4 130 2.9E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO3562 c11ac3d021a69d95fa331dab2f8bbc12 130 PANTHER PTHR21569 1 130 4.1E-77 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 YPO3562 c11ac3d021a69d95fa331dab2f8bbc12 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.996 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid YPO3562 c11ac3d021a69d95fa331dab2f8bbc12 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.1E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 YPO3562 c11ac3d021a69d95fa331dab2f8bbc12 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 YPO1175 3d3b0db781b05645965d2e3d65614e73 314 Pfam PF01207 Dihydrouridine synthase (Dus) 6 292 1.6E-88 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO1175 3d3b0db781b05645965d2e3d65614e73 314 PANTHER PTHR11082:SF26 1 314 1.1E-204 T 22-04-2016 YPO1175 3d3b0db781b05645965d2e3d65614e73 314 PIRSF PIRSF006621 1 314 1.8E-82 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO1175 3d3b0db781b05645965d2e3d65614e73 314 Gene3D G3DSA:3.20.20.70 2 241 4.2E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1175 3d3b0db781b05645965d2e3d65614e73 314 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO1175 3d3b0db781b05645965d2e3d65614e73 314 PANTHER PTHR11082 1 314 1.1E-204 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO1175 3d3b0db781b05645965d2e3d65614e73 314 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 10 312 51.76 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 YPO1175 3d3b0db781b05645965d2e3d65614e73 314 SUPERFAMILY SSF51395 3 304 8.97E-71 T 22-04-2016 YPO3828 51d4fffe9ab1728128dffda5a3330b41 350 Pfam PF03272 Putative mucin or carbohydrate-binding module 181 292 1.0E-30 T 22-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 YPO3828 51d4fffe9ab1728128dffda5a3330b41 350 Pfam PF03272 Putative mucin or carbohydrate-binding module 5 91 1.1E-8 T 22-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 YPO0375 c36bb54bec16888618c51296be721ba1 419 TIGRFAM TIGR01933 hflK: HflK protein 95 354 9.8E-121 T 22-04-2016 IPR010201 HflK GO:0016021 YPO0375 c36bb54bec16888618c51296be721ba1 419 Pfam PF12221 Bacterial membrane protein N terminal 1 59 4.2E-14 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal YPO0375 c36bb54bec16888618c51296be721ba1 419 PANTHER PTHR10264 13 389 2.4E-211 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO0375 c36bb54bec16888618c51296be721ba1 419 PRINTS PR00721 Stomatin signature 182 199 1.1E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO0375 c36bb54bec16888618c51296be721ba1 419 PRINTS PR00721 Stomatin signature 100 122 1.1E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO0375 c36bb54bec16888618c51296be721ba1 419 PRINTS PR00721 Stomatin signature 147 168 1.1E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO0375 c36bb54bec16888618c51296be721ba1 419 SUPERFAMILY SSF117892 126 257 4.18E-20 T 22-04-2016 IPR001107 Band 7 domain YPO0375 c36bb54bec16888618c51296be721ba1 419 Pfam PF01145 SPFH domain / Band 7 family 97 268 9.0E-31 T 22-04-2016 IPR001107 Band 7 domain YPO0375 c36bb54bec16888618c51296be721ba1 419 PANTHER PTHR10264:SF51 13 389 2.4E-211 T 22-04-2016 IPR010201 HflK GO:0016021 YPO0375 c36bb54bec16888618c51296be721ba1 419 SMART SM00244 93 253 7.6E-43 T 22-04-2016 IPR001107 Band 7 domain YPO2266 42ccd61c3dd8d1ae0fe6d80ea56ea01d 372 ProSitePatterns PS00216 Sugar transport proteins signature 1. 103 119 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPO2266 42ccd61c3dd8d1ae0fe6d80ea56ea01d 372 PANTHER PTHR23501 16 372 4.1E-182 T 22-04-2016 YPO2266 42ccd61c3dd8d1ae0fe6d80ea56ea01d 372 Gene3D G3DSA:1.20.1250.20 49 229 9.8E-32 T 22-04-2016 YPO2266 42ccd61c3dd8d1ae0fe6d80ea56ea01d 372 Gene3D G3DSA:1.20.1250.20 255 364 1.8E-5 T 22-04-2016 YPO2266 42ccd61c3dd8d1ae0fe6d80ea56ea01d 372 SUPERFAMILY SSF103473 32 365 5.36E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2266 42ccd61c3dd8d1ae0fe6d80ea56ea01d 372 Pfam PF07690 Major Facilitator Superfamily 53 359 7.7E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO2266 42ccd61c3dd8d1ae0fe6d80ea56ea01d 372 PANTHER PTHR23501:SF11 16 372 4.1E-182 T 22-04-2016 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 9.0E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 349 1.0E-157 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 Gene3D G3DSA:2.40.10.10 146 258 8.6E-39 T 22-04-2016 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 Pfam PF13180 PDZ domain 273 346 2.2E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 Gene3D G3DSA:2.30.42.10 259 355 5.4E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 SUPERFAMILY SSF50494 45 253 4.76E-59 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPO3568 99490c20f6425c823a3cb73432c6b12c 362 PANTHER PTHR22939:SF93 9 351 8.6E-179 T 22-04-2016 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 Gene3D G3DSA:2.40.10.10 40 143 8.5E-31 T 22-04-2016 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 Pfam PF13365 Trypsin-like peptidase domain 80 214 1.3E-26 T 22-04-2016 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 SMART SM00228 256 338 1.0E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 PANTHER PTHR22939 9 351 8.6E-179 T 22-04-2016 YPO3568 99490c20f6425c823a3cb73432c6b12c 362 SUPERFAMILY SSF50156 229 350 4.21E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO1471 49a04bc3760ce6129b87458e42af95da 880 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 3.4E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO1471 49a04bc3760ce6129b87458e42af95da 880 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 860 8.6E-14 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO1471 49a04bc3760ce6129b87458e42af95da 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 2.0E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1471 49a04bc3760ce6129b87458e42af95da 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 2.0E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1471 49a04bc3760ce6129b87458e42af95da 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 2.0E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1471 49a04bc3760ce6129b87458e42af95da 880 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 2.0E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1471 49a04bc3760ce6129b87458e42af95da 880 PANTHER PTHR11638 1 127 0.0 T 22-04-2016 YPO1471 49a04bc3760ce6129b87458e42af95da 880 PANTHER PTHR11638 162 869 0.0 T 22-04-2016 YPO1471 49a04bc3760ce6129b87458e42af95da 880 Gene3D G3DSA:3.40.50.300 196 378 2.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1471 49a04bc3760ce6129b87458e42af95da 880 Gene3D G3DSA:3.40.50.300 565 792 4.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1471 49a04bc3760ce6129b87458e42af95da 880 Gene3D G3DSA:1.10.8.60 793 865 1.7E-11 T 22-04-2016 YPO1471 49a04bc3760ce6129b87458e42af95da 880 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 239 351 1.7E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YPO1471 49a04bc3760ce6129b87458e42af95da 880 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 330 342 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YPO1471 49a04bc3760ce6129b87458e42af95da 880 SMART SM01086 782 875 1.9E-12 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YPO1471 49a04bc3760ce6129b87458e42af95da 880 SMART SM00382 611 772 3.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1471 49a04bc3760ce6129b87458e42af95da 880 SMART SM00382 234 379 8.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1471 49a04bc3760ce6129b87458e42af95da 880 SUPERFAMILY SSF81923 12 126 1.29E-16 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO1471 49a04bc3760ce6129b87458e42af95da 880 Gene3D G3DSA:1.10.1780.10 11 125 5.6E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YPO1471 49a04bc3760ce6129b87458e42af95da 880 SUPERFAMILY SSF52540 560 852 2.67E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1471 49a04bc3760ce6129b87458e42af95da 880 PANTHER PTHR11638:SF11 1 127 0.0 T 22-04-2016 YPO1471 49a04bc3760ce6129b87458e42af95da 880 PANTHER PTHR11638:SF11 162 869 0.0 T 22-04-2016 YPO1471 49a04bc3760ce6129b87458e42af95da 880 SUPERFAMILY SSF52540 196 531 1.45E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1471 49a04bc3760ce6129b87458e42af95da 880 Gene3D G3DSA:1.10.8.60 381 464 1.0E-29 T 22-04-2016 YPO1471 49a04bc3760ce6129b87458e42af95da 880 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 864 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF01479 S4 domain 97 143 7.0E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 PANTHER PTHR11831 1 206 3.1E-95 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 PANTHER PTHR11831:SF4 1 206 3.1E-95 T 22-04-2016 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM00363 96 160 8.2E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.6E-86 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.196 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM01390 3 95 6.1E-50 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 8.9E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:3.10.290.10 102 190 2.7E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 SUPERFAMILY SSF55174 3 206 6.54E-72 T 22-04-2016 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 YPO0233 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:1.10.1050.10 1 101 9.6E-42 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 YPO0784 b83e57b0876766d6b8765828fbccbc68 290 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YPO0784 b83e57b0876766d6b8765828fbccbc68 290 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 2.7E-80 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YPO0784 b83e57b0876766d6b8765828fbccbc68 290 PANTHER PTHR30589 2 284 1.6E-137 T 22-04-2016 YPO0784 b83e57b0876766d6b8765828fbccbc68 290 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 286 4.0E-106 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YPO0784 b83e57b0876766d6b8765828fbccbc68 290 PANTHER PTHR30589:SF0 2 284 1.6E-137 T 22-04-2016 YPO0784 b83e57b0876766d6b8765828fbccbc68 290 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.37 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YPO3565 8f9f43d89fac8ee1f99084e7f9ea47f5 134 PANTHER PTHR39579 1 134 1.2E-54 T 22-04-2016 YPO3565 8f9f43d89fac8ee1f99084e7f9ea47f5 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 7.3E-50 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 YPO3565 8f9f43d89fac8ee1f99084e7f9ea47f5 134 PIRSF PIRSF006318 1 134 8.3E-52 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 YPO1322 232a916130d0ffa02510ea202116d3c6 254 Gene3D G3DSA:3.40.50.1360 77 216 2.4E-7 T 22-04-2016 YPO1322 232a916130d0ffa02510ea202116d3c6 254 PANTHER PTHR30363:SF8 2 254 1.2E-173 T 22-04-2016 YPO1322 232a916130d0ffa02510ea202116d3c6 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 57 6.7E-11 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1322 232a916130d0ffa02510ea202116d3c6 254 SUPERFAMILY SSF100950 76 235 1.57E-24 T 22-04-2016 YPO1322 232a916130d0ffa02510ea202116d3c6 254 PANTHER PTHR30363 2 254 1.2E-173 T 22-04-2016 YPO1322 232a916130d0ffa02510ea202116d3c6 254 SMART SM00420 8 57 6.2E-9 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1322 232a916130d0ffa02510ea202116d3c6 254 Gene3D G3DSA:1.10.10.10 3 43 1.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1322 232a916130d0ffa02510ea202116d3c6 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPO1322 232a916130d0ffa02510ea202116d3c6 254 Pfam PF00455 DeoR C terminal sensor domain 77 235 1.2E-47 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPO1322 232a916130d0ffa02510ea202116d3c6 254 SMART SM01134 75 236 4.0E-63 T 22-04-2016 YPO0763 16d8832748606059ed593b0aae524e47 439 Gene3D G3DSA:1.25.40.10 235 422 6.5E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO0763 16d8832748606059ed593b0aae524e47 439 SUPERFAMILY SSF48452 260 407 3.48E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 SUPERFAMILY SSF54919 1 140 2.1E-58 T 22-04-2016 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 SMART SM00562 3 140 6.0E-85 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.1E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.1E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.1E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.1E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.1E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 PANTHER PTHR11349 1 140 5.3E-78 T 22-04-2016 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 5.4E-56 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.115 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2883 6c1b9289d1b1e904b3796bec0a56e532 142 Gene3D G3DSA:3.30.70.141 1 139 9.9E-60 T 22-04-2016 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.40.120.10 251 359 5.3E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF53738 258 365 7.06E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF53738 156 256 2.59E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 1.8E-14 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 8.8E-46 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.30.310.50 360 443 3.9E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.1E-194 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF53738 2 181 1.02E-49 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.7E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.40.120.10 4 151 1.6E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 Gene3D G3DSA:3.40.120.10 176 250 1.9E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.355 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 5.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 5.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 PANTHER PTHR22573 1 444 2.4E-189 T 22-04-2016 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 SUPERFAMILY SSF55957 357 445 7.19E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 PANTHER PTHR22573:SF15 1 444 2.4E-189 T 22-04-2016 YPO3500 917ffccec3c58d39b1f52151e6074ab4 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 5.5E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO3911 50bb697db991d84b9ce34b221787cdf9 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site YPO3911 50bb697db991d84b9ce34b221787cdf9 367 PANTHER PTHR11061:SF25 6 367 1.7E-243 T 22-04-2016 YPO3911 50bb697db991d84b9ce34b221787cdf9 367 PANTHER PTHR11061 6 367 1.7E-243 T 22-04-2016 YPO3911 50bb697db991d84b9ce34b221787cdf9 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 366 6.1E-191 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YPO3911 50bb697db991d84b9ce34b221787cdf9 367 SUPERFAMILY SSF53335 7 365 7.71E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3911 50bb697db991d84b9ce34b221787cdf9 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site YPO3911 50bb697db991d84b9ce34b221787cdf9 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.786 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YPO3911 50bb697db991d84b9ce34b221787cdf9 367 Gene3D G3DSA:3.40.50.150 158 364 3.9E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3911 50bb697db991d84b9ce34b221787cdf9 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 366 1.6E-191 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 Gene3D G3DSA:1.10.730.10 380 534 4.1E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 SUPERFAMILY SSF57770 142 176 1.12E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 Gene3D G3DSA:2.40.50.140 566 675 2.5E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1522 381a78c5b41808a611ce611e4d203ca2 675 Pfam PF09334 tRNA synthetases class I (M) 8 396 4.2E-163 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 SUPERFAMILY SSF52374 176 387 3.58E-101 T 22-04-2016 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 SUPERFAMILY SSF52374 6 141 3.58E-101 T 22-04-2016 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 SUPERFAMILY SSF50249 568 674 2.33E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1522 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 Gene3D G3DSA:2.20.28.20 145 176 2.2E-19 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 PANTHER PTHR11946:SF86 6 630 3.4E-256 T 22-04-2016 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 PANTHER PTHR11946 6 630 3.4E-256 T 22-04-2016 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 6.0E-198 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 SUPERFAMILY SSF47323 390 546 1.2E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 538 675 6.7E-45 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 Gene3D G3DSA:3.40.50.620 183 379 2.5E-89 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1522 381a78c5b41808a611ce611e4d203ca2 675 Gene3D G3DSA:3.40.50.620 6 144 2.5E-89 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1522 381a78c5b41808a611ce611e4d203ca2 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.173 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YPO1522 381a78c5b41808a611ce611e4d203ca2 675 Pfam PF01588 Putative tRNA binding domain 579 672 2.1E-21 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 YPO1000 f9591b14fb43343158f6a03ea10e65d5 425 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 67 405 1.2E-72 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO1000 f9591b14fb43343158f6a03ea10e65d5 425 SUPERFAMILY SSF111369 81 329 8.89E-56 T 22-04-2016 YPO1000 f9591b14fb43343158f6a03ea10e65d5 425 PANTHER PTHR30158:SF2 26 419 1.2E-183 T 22-04-2016 YPO1000 f9591b14fb43343158f6a03ea10e65d5 425 PANTHER PTHR30158 26 419 1.2E-183 T 22-04-2016 YPO1000 f9591b14fb43343158f6a03ea10e65d5 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 85 249 2.8E-8 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO1000 f9591b14fb43343158f6a03ea10e65d5 425 Gene3D G3DSA:2.40.50.100 200 232 6.2E-16 T 22-04-2016 YPO1000 f9591b14fb43343158f6a03ea10e65d5 425 Gene3D G3DSA:2.40.50.100 92 125 6.2E-16 T 22-04-2016 YPO1801 d9d1a47dc41fdebc168439146930edcf 225 Pfam PF13860 FlgD Ig-like domain 114 183 1.3E-23 T 22-04-2016 IPR025965 FlgD Ig-like domain YPO1801 d9d1a47dc41fdebc168439146930edcf 225 Pfam PF13861 FlgD Tudor-like domain 84 222 4.9E-16 T 22-04-2016 IPR025963 FlgD Tudor-like domain YPO1801 d9d1a47dc41fdebc168439146930edcf 225 PANTHER PTHR30435 2 225 4.2E-74 T 22-04-2016 YPO1801 d9d1a47dc41fdebc168439146930edcf 225 PANTHER PTHR30435:SF15 2 225 4.2E-74 T 22-04-2016 YPO1801 d9d1a47dc41fdebc168439146930edcf 225 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 75 3.8E-24 T 22-04-2016 IPR005648 Flagellar hook capping protein YPO0167 f795ada360a598fdfc0e0a8cc1e04bbe 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YPO0167 f795ada360a598fdfc0e0a8cc1e04bbe 189 SUPERFAMILY SSF50891 26 188 1.23E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain YPO0167 f795ada360a598fdfc0e0a8cc1e04bbe 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 1.3E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPO0167 f795ada360a598fdfc0e0a8cc1e04bbe 189 Gene3D G3DSA:2.40.100.10 26 188 5.2E-55 T 22-04-2016 IPR029000 Cyclophilin-like domain YPO0167 f795ada360a598fdfc0e0a8cc1e04bbe 189 PANTHER PTHR11071:SF265 25 188 2.7E-68 T 22-04-2016 YPO0167 f795ada360a598fdfc0e0a8cc1e04bbe 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 7.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPO0167 f795ada360a598fdfc0e0a8cc1e04bbe 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 7.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPO0167 f795ada360a598fdfc0e0a8cc1e04bbe 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 7.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YPO0167 f795ada360a598fdfc0e0a8cc1e04bbe 189 PANTHER PTHR11071 25 188 2.7E-68 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 YPO2743 d2e52256087bdf789a86516fe165474c 254 PANTHER PTHR30035 1 252 2.7E-122 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPO2743 d2e52256087bdf789a86516fe165474c 254 Pfam PF04333 MlaA lipoprotein 31 224 1.1E-65 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPO2743 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 101 118 9.7E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPO2743 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 140 157 9.7E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPO2743 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 32 45 9.7E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPO2743 d2e52256087bdf789a86516fe165474c 254 PRINTS PR01805 VacJ lipoprotein signature 50 66 9.7E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YPO2743 d2e52256087bdf789a86516fe165474c 254 PANTHER PTHR30035:SF3 1 252 2.7E-122 T 22-04-2016 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 PANTHER PTHR11985:SF14 1 540 0.0 T 22-04-2016 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 PANTHER PTHR11985 1 540 0.0 T 22-04-2016 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 Pfam PF01266 FAD dependent oxidoreductase 11 360 4.7E-53 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 SUPERFAMILY SSF51905 10 323 6.12E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 540 4.6E-268 T 22-04-2016 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 484 1.5E-9 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 Gene3D G3DSA:3.30.9.10 217 317 1.2E-8 T 22-04-2016 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 380 472 1.6E-7 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 Gene3D G3DSA:3.50.50.60 140 216 3.6E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3826 8fe06e2e7d7fdb25e62a22bd8237154c 551 Gene3D G3DSA:3.50.50.60 4 101 3.6E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3846 d500e1f4e118acf6954aa9c9c00d25d8 62 Pfam PF13627 Prokaryotic lipoprotein-attachment site 10 29 9.5E-9 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site YPO2727 4b8553c81c95a952ba43ebf3e3dc8186 268 Pfam PF07024 ImpE protein 145 261 1.3E-41 T 22-04-2016 IPR009211 Predicted virulence protein, SciE type YPO2727 4b8553c81c95a952ba43ebf3e3dc8186 268 SUPERFAMILY SSF144059 5 265 6.8E-86 T 22-04-2016 YPO2727 4b8553c81c95a952ba43ebf3e3dc8186 268 Gene3D G3DSA:1.25.40.10 21 135 2.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2727 4b8553c81c95a952ba43ebf3e3dc8186 268 PIRSF PIRSF029288 1 267 1.2E-99 T 22-04-2016 IPR009211 Predicted virulence protein, SciE type YPO2036 1a8558e8bcfededcfca443cd7bea3fac 370 Pfam PF13412 Winged helix-turn-helix DNA-binding 13 56 2.8E-5 T 22-04-2016 YPO2036 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:3.30.420.40 78 220 4.4E-28 T 22-04-2016 YPO2036 1a8558e8bcfededcfca443cd7bea3fac 370 PANTHER PTHR18964 58 369 2.1E-87 T 22-04-2016 YPO2036 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:1.10.10.10 14 77 6.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2036 1a8558e8bcfededcfca443cd7bea3fac 370 PANTHER PTHR18964:SF109 58 369 2.1E-87 T 22-04-2016 YPO2036 1a8558e8bcfededcfca443cd7bea3fac 370 SUPERFAMILY SSF53067 81 365 6.2E-32 T 22-04-2016 YPO2036 1a8558e8bcfededcfca443cd7bea3fac 370 Gene3D G3DSA:3.30.420.40 221 344 1.7E-14 T 22-04-2016 YPO2036 1a8558e8bcfededcfca443cd7bea3fac 370 Pfam PF00480 ROK family 94 242 6.8E-18 T 22-04-2016 IPR000600 ROK family YPO2036 1a8558e8bcfededcfca443cd7bea3fac 370 SUPERFAMILY SSF46785 12 76 1.76E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04546 Sigma-70, non-essential region 139 347 2.9E-74 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.10.10 451 502 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.10.10 542 611 1.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 402 415 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 SUPERFAMILY SSF88659 508 610 2.32E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Gene3D G3DSA:1.10.601.10 112 447 8.1E-138 T 22-04-2016 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 SUPERFAMILY SSF88659 451 524 1.54E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 PANTHER PTHR30603:SF0 325 611 6.0E-253 T 22-04-2016 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 PANTHER PTHR30603:SF0 1 152 6.0E-253 T 22-04-2016 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 374 599 3.5E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 611 46.659 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.4E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 SUPERFAMILY SSF88946 115 445 2.35E-102 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 571 597 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04545 Sigma-70, region 4 546 599 8.9E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 374 610 7.8E-121 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 402 415 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 586 597 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 550 562 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 426 434 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 PRINTS PR00046 Major sigma-70 factor signature 571 586 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 PANTHER PTHR30603 325 611 6.0E-253 T 22-04-2016 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 PANTHER PTHR30603 1 152 6.0E-253 T 22-04-2016 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04542 Sigma-70 region 2 378 447 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 1.7E-30 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 YPO0643 8ca25f5eb536d0a603a4e4b83768174b 612 Pfam PF04539 Sigma-70 region 3 457 532 3.4E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO0106 8c365328ba9c7eae960124b5ef956073 174 Gene3D G3DSA:3.60.20.10 2 172 9.5E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO0106 8c365328ba9c7eae960124b5ef956073 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.7 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YPO0106 8c365328ba9c7eae960124b5ef956073 174 PANTHER PTHR32194 2 174 4.6E-128 T 22-04-2016 YPO0106 8c365328ba9c7eae960124b5ef956073 174 Pfam PF00227 Proteasome subunit 2 165 2.0E-21 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 YPO0106 8c365328ba9c7eae960124b5ef956073 174 PIRSF PIRSF039093 1 174 2.6E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YPO0106 8c365328ba9c7eae960124b5ef956073 174 SUPERFAMILY SSF56235 2 172 7.73E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO0106 8c365328ba9c7eae960124b5ef956073 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.2E-86 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YPO1317 bf1b4891dd913ca31bdb7c72738d5c70 274 PIRSF PIRSF002854 1 271 7.9E-96 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPO1317 bf1b4891dd913ca31bdb7c72738d5c70 274 Pfam PF03180 NLPA lipoprotein 32 269 6.7E-77 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPO1317 bf1b4891dd913ca31bdb7c72738d5c70 274 SUPERFAMILY SSF53850 32 270 1.99E-65 T 22-04-2016 YPO1317 bf1b4891dd913ca31bdb7c72738d5c70 274 PANTHER PTHR30429:SF0 1 271 6.5E-135 T 22-04-2016 YPO1317 bf1b4891dd913ca31bdb7c72738d5c70 274 PANTHER PTHR30429 1 271 6.5E-135 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPO1317 bf1b4891dd913ca31bdb7c72738d5c70 274 Gene3D G3DSA:3.40.190.10 108 221 2.0E-44 T 22-04-2016 YPO2002 c8e3d229c6044526636bafa44e3e2539 363 SUPERFAMILY SSF53474 251 353 2.32E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2002 c8e3d229c6044526636bafa44e3e2539 363 SUPERFAMILY SSF53474 58 205 2.32E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2002 c8e3d229c6044526636bafa44e3e2539 363 Pfam PF01738 Dienelactone hydrolase family 75 191 8.4E-6 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 YPO2002 c8e3d229c6044526636bafa44e3e2539 363 PANTHER PTHR17630:SF49 45 204 8.9E-99 T 22-04-2016 YPO2002 c8e3d229c6044526636bafa44e3e2539 363 PANTHER PTHR17630:SF49 224 363 8.9E-99 T 22-04-2016 YPO2002 c8e3d229c6044526636bafa44e3e2539 363 Gene3D G3DSA:3.40.50.1820 64 363 3.1E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2002 c8e3d229c6044526636bafa44e3e2539 363 PANTHER PTHR17630 45 204 8.9E-99 T 22-04-2016 YPO2002 c8e3d229c6044526636bafa44e3e2539 363 PANTHER PTHR17630 224 363 8.9E-99 T 22-04-2016 YPO0546 6f05baa921ff4b44c7b7f96455005d0f 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 57.829 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YPO0546 6f05baa921ff4b44c7b7f96455005d0f 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 9.0E-80 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YPO0546 6f05baa921ff4b44c7b7f96455005d0f 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 151 1.3E-63 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YPO0546 6f05baa921ff4b44c7b7f96455005d0f 152 SUPERFAMILY SSF89447 1 138 4.5E-46 T 22-04-2016 YPO0546 6f05baa921ff4b44c7b7f96455005d0f 152 PANTHER PTHR34701 2 151 3.6E-68 T 22-04-2016 YPO0546 6f05baa921ff4b44c7b7f96455005d0f 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 139 1.9E-20 T 22-04-2016 IPR020603 MraZ domain YPO0546 6f05baa921ff4b44c7b7f96455005d0f 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.5E-24 T 22-04-2016 IPR020603 MraZ domain YPO0427 54e7ce9d401f8218bf3b4b43805e2203 347 Pfam PF05175 Methyltransferase small domain 167 333 2.3E-57 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YPO0427 54e7ce9d401f8218bf3b4b43805e2203 347 SUPERFAMILY SSF53335 154 315 3.29E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0427 54e7ce9d401f8218bf3b4b43805e2203 347 Gene3D G3DSA:3.40.50.150 162 331 2.0E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0427 54e7ce9d401f8218bf3b4b43805e2203 347 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.019 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0427 54e7ce9d401f8218bf3b4b43805e2203 347 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO0427 54e7ce9d401f8218bf3b4b43805e2203 347 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.5E-58 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0427 54e7ce9d401f8218bf3b4b43805e2203 347 PANTHER PTHR18895 53 345 4.7E-179 T 22-04-2016 YPO0427 54e7ce9d401f8218bf3b4b43805e2203 347 PANTHER PTHR18895:SF70 53 345 4.7E-179 T 22-04-2016 YPO0936 adb96a9bfc3fe6a4045507f3749e2180 187 PANTHER PTHR30327:SF1 1 187 2.3E-72 T 22-04-2016 YPO0936 adb96a9bfc3fe6a4045507f3749e2180 187 Gene3D G3DSA:3.30.70.1300 41 130 2.3E-26 T 22-04-2016 YPO0936 adb96a9bfc3fe6a4045507f3749e2180 187 PANTHER PTHR30327 1 187 2.3E-72 T 22-04-2016 YPO0936 adb96a9bfc3fe6a4045507f3749e2180 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 4.2E-48 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 YPO0936 adb96a9bfc3fe6a4045507f3749e2180 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 38.942 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 YPO0936 adb96a9bfc3fe6a4045507f3749e2180 187 SUPERFAMILY SSF143456 1 187 3.53E-64 T 22-04-2016 YPO0936 adb96a9bfc3fe6a4045507f3749e2180 187 Gene3D G3DSA:3.40.1740.10 131 177 1.1E-35 T 22-04-2016 YPO0936 adb96a9bfc3fe6a4045507f3749e2180 187 Gene3D G3DSA:3.40.1740.10 2 40 1.1E-35 T 22-04-2016 YPO1161 c903d51151d13a2fe98b9c39684e274f 81 PANTHER PTHR33359 1 81 1.9E-26 T 22-04-2016 YPO1161 c903d51151d13a2fe98b9c39684e274f 81 Gene3D G3DSA:3.10.20.30 1 81 1.1E-24 T 22-04-2016 IPR012675 Beta-grasp domain YPO1161 c903d51151d13a2fe98b9c39684e274f 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 2.1E-24 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 YPO1161 c903d51151d13a2fe98b9c39684e274f 81 Pfam PF02597 ThiS family 4 81 5.5E-21 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPO1161 c903d51151d13a2fe98b9c39684e274f 81 SUPERFAMILY SSF54285 1 81 3.18E-22 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPO2573 9bf7f27b649b1424f95d75168b6029db 2004 SMART SM01360 1306 1398 2.6E-22 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 YPO2573 9bf7f27b649b1424f95d75168b6029db 2004 Pfam PF00207 Alpha-2-macroglobulin family 1307 1385 4.5E-11 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 YPO2573 9bf7f27b649b1424f95d75168b6029db 2004 Pfam PF01835 MG2 domain 737 834 1.3E-15 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 YPO2573 9bf7f27b649b1424f95d75168b6029db 2004 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1101 1239 6.0E-10 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YPO2573 9bf7f27b649b1424f95d75168b6029db 2004 SMART SM01359 1101 1240 8.2E-33 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YPO2573 9bf7f27b649b1424f95d75168b6029db 2004 PANTHER PTHR40094 44 2004 0.0 T 22-04-2016 YPO2573 9bf7f27b649b1424f95d75168b6029db 2004 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 623 726 7.9E-24 T 22-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain YPO2573 9bf7f27b649b1424f95d75168b6029db 2004 PANTHER PTHR40094:SF1 44 2004 0.0 T 22-04-2016 YPO2573 9bf7f27b649b1424f95d75168b6029db 2004 SUPERFAMILY SSF48239 1509 1766 1.35E-15 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YPO0407 07fe504eae44674083d7e57354a71e1e 96 PANTHER PTHR33336 1 96 6.7E-58 T 22-04-2016 YPO0407 07fe504eae44674083d7e57354a71e1e 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.9E-15 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YPO0407 07fe504eae44674083d7e57354a71e1e 96 SUPERFAMILY SSF54909 1 91 6.19E-24 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO0407 07fe504eae44674083d7e57354a71e1e 96 PANTHER PTHR33336:SF1 1 96 6.7E-58 T 22-04-2016 YPO0407 07fe504eae44674083d7e57354a71e1e 96 Gene3D G3DSA:3.30.70.900 1 90 5.5E-27 T 22-04-2016 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 Gene3D G3DSA:3.40.50.10750 572 729 4.6E-53 T 22-04-2016 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 Gene3D G3DSA:3.40.50.720 161 449 1.9E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 SUPERFAMILY SSF51735 163 453 4.91E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 5.1E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 SMART SM01274 18 151 3.6E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 SUPERFAMILY SSF53659 430 757 7.81E-90 T 22-04-2016 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 PIRSF PIRSF036684 1 760 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 Gene3D G3DSA:3.40.50.10380 10 160 2.1E-50 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 SUPERFAMILY SSF53223 10 161 2.16E-52 T 22-04-2016 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 PANTHER PTHR23406 31 442 5.3E-171 T 22-04-2016 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 753 2.0E-97 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 2.6E-17 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YPO3034 387129b5be02e28eecde0ba27d4e7d15 761 SMART SM00919 163 401 3.1E-139 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 SUPERFAMILY SSF46946 130 222 2.75E-29 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 114 2.9E-29 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 PANTHER PTHR22993 2 268 6.7E-138 T 22-04-2016 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.3E-9 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 SMART SM01232 129 221 1.0E-47 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 Gene3D G3DSA:3.20.190.10 2 129 2.8E-36 T 22-04-2016 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 SMART SM00898 2 115 8.4E-54 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.986 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.4E-25 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.5E-100 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 SUPERFAMILY SSF57716 217 268 3.99E-17 T 22-04-2016 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 SUPERFAMILY SSF81624 2 138 2.75E-43 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 PANTHER PTHR22993:SF15 2 268 6.7E-138 T 22-04-2016 YPO0052 68a2d5d37b459b98d11b552b4327bc28 269 Gene3D G3DSA:1.10.8.50 130 269 1.1E-49 T 22-04-2016 YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 Gene3D G3DSA:3.90.180.10 1 85 1.1E-7 T 22-04-2016 IPR011032 GroES-like YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 SUPERFAMILY SSF51735 116 288 3.88E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.1E-4 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 Pfam PF00107 Zinc-binding dehydrogenase 158 269 8.4E-16 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 Gene3D G3DSA:3.40.50.720 125 290 1.3E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 SMART SM00829 11 313 7.6E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 2.0E-136 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 PANTHER PTHR11695 15 325 3.5E-180 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 PANTHER PTHR11695:SF13 15 325 3.5E-180 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI YPO3663 ed7a5dba56b414206db0c244e7e24e32 325 SUPERFAMILY SSF50129 1 145 2.2E-46 T 22-04-2016 IPR011032 GroES-like YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 Gene3D G3DSA:1.10.10.60 27 98 1.7E-28 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.7E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 SUPERFAMILY SSF46689 4 98 5.38E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.512 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 PANTHER PTHR32071 5 98 3.6E-34 T 22-04-2016 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO3654 b35aa6e9977e10a02a1243efe8e50ad3 98 PIRSF PIRSF002097 1 98 7.0E-46 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YPO2978 16333c409146b5f118ada666a7c48cea 175 Pfam PF05232 Chlorhexidine efflux transporter 23 85 5.7E-24 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter YPO2978 16333c409146b5f118ada666a7c48cea 175 Pfam PF05232 Chlorhexidine efflux transporter 91 153 5.5E-24 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter YPO2978 16333c409146b5f118ada666a7c48cea 175 PANTHER PTHR42641:SF2 1 175 5.4E-124 T 22-04-2016 YPO2978 16333c409146b5f118ada666a7c48cea 175 PANTHER PTHR42641 1 175 5.4E-124 T 22-04-2016 YPO0297 40b31f73708f89ae6d5bff623230b885 345 PANTHER PTHR30238:SF0 216 344 2.8E-140 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 YPO0297 40b31f73708f89ae6d5bff623230b885 345 PANTHER PTHR30238:SF0 7 194 2.8E-140 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 YPO0297 40b31f73708f89ae6d5bff623230b885 345 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 10 337 3.0E-104 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 YPO0297 40b31f73708f89ae6d5bff623230b885 345 Pfam PF03741 Integral membrane protein TerC family 73 299 1.6E-41 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 YPO0297 40b31f73708f89ae6d5bff623230b885 345 PANTHER PTHR30238 216 344 2.8E-140 T 22-04-2016 YPO0297 40b31f73708f89ae6d5bff623230b885 345 PANTHER PTHR30238 7 194 2.8E-140 T 22-04-2016 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 113 196 2.3E-39 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 Pfam PF02378 Phosphotransferase system, EIIC 237 500 2.8E-16 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 221 556 1.0E-142 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 114 195 3.2E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 SUPERFAMILY SSF52794 4 88 7.85E-11 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 SUPERFAMILY SSF52794 111 211 1.92E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 PANTHER PTHR30505:SF0 14 562 3.0E-278 T 22-04-2016 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 Gene3D G3DSA:3.40.50.2300 2 88 8.6E-7 T 22-04-2016 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 PANTHER PTHR30505 14 562 3.0E-278 T 22-04-2016 YPO1300 2c30d70cb151d8a499974d4caab4368b 566 Gene3D G3DSA:3.40.50.2300 109 212 2.0E-41 T 22-04-2016 YPO3796 650a1fc6a9a5499992aeafdf8c2899be 439 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 YPO3796 650a1fc6a9a5499992aeafdf8c2899be 439 PANTHER PTHR30061 11 439 1.9E-174 T 22-04-2016 YPO3796 650a1fc6a9a5499992aeafdf8c2899be 439 Gene3D G3DSA:3.40.190.10 147 347 5.5E-39 T 22-04-2016 YPO3796 650a1fc6a9a5499992aeafdf8c2899be 439 PANTHER PTHR30061:SF7 11 439 1.9E-174 T 22-04-2016 YPO3796 650a1fc6a9a5499992aeafdf8c2899be 439 SUPERFAMILY SSF53850 27 426 2.33E-72 T 22-04-2016 YPO3796 650a1fc6a9a5499992aeafdf8c2899be 439 Pfam PF13416 Bacterial extracellular solute-binding protein 46 359 1.5E-40 T 22-04-2016 YPO0453 91f1475e0da3958d7ef609934cf1c0a2 125 Hamap MF_00475 Trp operon repressor [trpR]. 31 124 23.4 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YPO0453 91f1475e0da3958d7ef609934cf1c0a2 125 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 26 117 1.0E-35 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YPO0453 91f1475e0da3958d7ef609934cf1c0a2 125 SUPERFAMILY SSF48295 22 120 2.3E-28 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YPO0453 91f1475e0da3958d7ef609934cf1c0a2 125 TIGRFAM TIGR01321 TrpR: trp operon repressor 30 120 4.3E-35 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YPO0453 91f1475e0da3958d7ef609934cf1c0a2 125 Pfam PF01371 Trp repressor protein 33 119 2.0E-29 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 YPO0453 91f1475e0da3958d7ef609934cf1c0a2 125 PANTHER PTHR38025 9 125 6.1E-53 T 22-04-2016 YPO0453 91f1475e0da3958d7ef609934cf1c0a2 125 PANTHER PTHR38025:SF1 9 125 6.1E-53 T 22-04-2016 YPO0453 91f1475e0da3958d7ef609934cf1c0a2 125 Gene3D G3DSA:1.10.1270.10 26 123 7.8E-45 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 YPO0786 653463b6538c0dcac193641c1c3155d2 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.2E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YPO0786 653463b6538c0dcac193641c1c3155d2 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.2E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YPO0786 653463b6538c0dcac193641c1c3155d2 175 Gene3D G3DSA:3.90.79.10 3 152 2.3E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO0786 653463b6538c0dcac193641c1c3155d2 175 SUPERFAMILY SSF55811 6 155 4.6E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO0786 653463b6538c0dcac193641c1c3155d2 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPO0786 653463b6538c0dcac193641c1c3155d2 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.062 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH YPO0786 653463b6538c0dcac193641c1c3155d2 175 PANTHER PTHR23114 1 174 1.4E-73 T 22-04-2016 YPO0786 653463b6538c0dcac193641c1c3155d2 175 Pfam PF00293 NUDIX domain 7 146 9.9E-29 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO1391 254e9bb73396fc3b5b6be9bcd83b8173 230 Pfam PF02224 Cytidylate kinase 8 221 3.0E-81 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 YPO1391 254e9bb73396fc3b5b6be9bcd83b8173 230 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.924 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 YPO1391 254e9bb73396fc3b5b6be9bcd83b8173 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 5.0E-92 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 YPO1391 254e9bb73396fc3b5b6be9bcd83b8173 230 PANTHER PTHR21299 6 230 3.5E-86 T 22-04-2016 YPO1391 254e9bb73396fc3b5b6be9bcd83b8173 230 SUPERFAMILY SSF52540 6 224 3.05E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1391 254e9bb73396fc3b5b6be9bcd83b8173 230 Gene3D G3DSA:3.40.50.300 6 221 2.0E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3594 af8fa644729b768f147a8091cc26d47c 349 PANTHER PTHR35564:SF3 7 343 9.0E-181 T 22-04-2016 YPO3594 af8fa644729b768f147a8091cc26d47c 349 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 25 335 3.6E-92 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPO3594 af8fa644729b768f147a8091cc26d47c 349 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 25 335 3.1E-99 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPO3594 af8fa644729b768f147a8091cc26d47c 349 PANTHER PTHR35564 7 343 9.0E-181 T 22-04-2016 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 269 4.0E-99 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 PANTHER PTHR21581 1 400 8.7E-230 T 22-04-2016 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 Gene3D G3DSA:2.60.410.10 289 380 6.3E-32 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 SUPERFAMILY SSF69189 289 382 2.94E-25 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 289 380 1.0E-24 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 Gene3D G3DSA:3.40.710.10 37 288 4.1E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 PANTHER PTHR21581:SF4 1 400 8.7E-230 T 22-04-2016 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 4.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 4.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 4.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 SMART SM00936 289 380 6.0E-34 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO2601 7d54c5b7bafb0ef0d6e4193314e98de8 400 SUPERFAMILY SSF56601 10 289 5.64E-78 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0079 0f738bbacb97c8a53a61ba5aad599617 329 Pfam PF13531 Bacterial extracellular solute-binding protein 41 280 4.1E-44 T 22-04-2016 YPO0079 0f738bbacb97c8a53a61ba5aad599617 329 Gene3D G3DSA:3.40.190.10 170 295 1.3E-31 T 22-04-2016 YPO0079 0f738bbacb97c8a53a61ba5aad599617 329 Gene3D G3DSA:3.40.190.10 21 165 8.8E-52 T 22-04-2016 YPO0079 0f738bbacb97c8a53a61ba5aad599617 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 14 326 7.0E-176 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YPO0079 0f738bbacb97c8a53a61ba5aad599617 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 YPO0079 0f738bbacb97c8a53a61ba5aad599617 329 SUPERFAMILY SSF53850 21 326 1.96E-90 T 22-04-2016 YPO0079 0f738bbacb97c8a53a61ba5aad599617 329 PANTHER PTHR30368:SF2 1 329 3.0E-195 T 22-04-2016 YPO0079 0f738bbacb97c8a53a61ba5aad599617 329 PANTHER PTHR30368 1 329 3.0E-195 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YPO3164 496887891a01b2fe4231020d6a0819af 318 PANTHER PTHR22888:SF13 1 269 4.6E-165 T 22-04-2016 YPO3164 496887891a01b2fe4231020d6a0819af 318 Gene3D G3DSA:2.60.40.420 125 279 4.7E-41 T 22-04-2016 IPR008972 Cupredoxin YPO3164 496887891a01b2fe4231020d6a0819af 318 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 240 1.3E-113 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 YPO3164 496887891a01b2fe4231020d6a0819af 318 Pfam PF06481 COX Aromatic Rich Motif 240 286 3.9E-20 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 YPO3164 496887891a01b2fe4231020d6a0819af 318 SUPERFAMILY SSF49503 124 282 7.71E-53 T 22-04-2016 IPR008972 Cupredoxin YPO3164 496887891a01b2fe4231020d6a0819af 318 Gene3D G3DSA:1.10.287.90 27 113 3.8E-35 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 YPO3164 496887891a01b2fe4231020d6a0819af 318 PIRSF PIRSF000292 1 314 4.9E-130 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 YPO3164 496887891a01b2fe4231020d6a0819af 318 PANTHER PTHR22888 1 269 4.6E-165 T 22-04-2016 YPO3164 496887891a01b2fe4231020d6a0819af 318 SUPERFAMILY SSF81464 18 116 4.58E-23 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 YPO0183 be3d38673b37e688a9848e892785cb30 255 Pfam PF00005 ABC transporter 17 156 8.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0183 be3d38673b37e688a9848e892785cb30 255 PANTHER PTHR24220:SF564 3 205 3.5E-150 T 22-04-2016 YPO0183 be3d38673b37e688a9848e892785cb30 255 PANTHER PTHR24220 3 205 3.5E-150 T 22-04-2016 YPO0183 be3d38673b37e688a9848e892785cb30 255 Gene3D G3DSA:3.40.50.300 1 213 7.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0183 be3d38673b37e688a9848e892785cb30 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0183 be3d38673b37e688a9848e892785cb30 255 SMART SM00382 26 215 1.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0183 be3d38673b37e688a9848e892785cb30 255 SUPERFAMILY SSF52540 1 213 1.0E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1306 9b1f1685f014888860602924d4ff9ca1 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YPO1306 9b1f1685f014888860602924d4ff9ca1 285 SMART SM00518 3 279 1.2E-128 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YPO1306 9b1f1685f014888860602924d4ff9ca1 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 42.751 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YPO1306 9b1f1685f014888860602924d4ff9ca1 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YPO1306 9b1f1685f014888860602924d4ff9ca1 285 PANTHER PTHR21445 1 282 1.3E-154 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YPO1306 9b1f1685f014888860602924d4ff9ca1 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YPO1306 9b1f1685f014888860602924d4ff9ca1 285 SUPERFAMILY SSF51658 1 279 1.96E-99 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1306 9b1f1685f014888860602924d4ff9ca1 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 1.0E-106 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YPO1306 9b1f1685f014888860602924d4ff9ca1 285 Gene3D G3DSA:3.20.20.150 1 278 1.8E-116 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1306 9b1f1685f014888860602924d4ff9ca1 285 PANTHER PTHR21445:SF0 1 282 1.3E-154 T 22-04-2016 YPO1306 9b1f1685f014888860602924d4ff9ca1 285 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 1.4E-41 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 SUPERFAMILY SSF46785 21 165 2.12E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 SMART SM00347 46 148 5.0E-31 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 Gene3D G3DSA:1.10.10.10 15 166 3.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.6E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.6E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.6E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.6E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 Pfam PF01047 MarR family 53 112 5.5E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 PANTHER PTHR18964:SF141 44 170 2.9E-48 T 22-04-2016 YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site YPO3266 ff8e1f90ec3232ca99d633b736c3f540 170 PANTHER PTHR18964 44 170 2.9E-48 T 22-04-2016 YPO2213 e3aafa216877091992928bf55c56ef07 344 PANTHER PTHR21600 28 337 7.0E-110 T 22-04-2016 YPO2213 e3aafa216877091992928bf55c56ef07 344 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 133 147 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPO2213 e3aafa216877091992928bf55c56ef07 344 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 99 259 5.1E-63 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPO2213 e3aafa216877091992928bf55c56ef07 344 SMART SM00363 29 100 6.4E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO2213 e3aafa216877091992928bf55c56ef07 344 SUPERFAMILY SSF55120 95 259 5.55E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2213 e3aafa216877091992928bf55c56ef07 344 Gene3D G3DSA:3.10.290.10 29 88 5.9E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO2213 e3aafa216877091992928bf55c56ef07 344 Pfam PF00849 RNA pseudouridylate synthase 95 225 3.1E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2213 e3aafa216877091992928bf55c56ef07 344 Pfam PF01479 S4 domain 30 70 3.3E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO2213 e3aafa216877091992928bf55c56ef07 344 PANTHER PTHR21600:SF2 28 337 7.0E-110 T 22-04-2016 YPO2213 e3aafa216877091992928bf55c56ef07 344 SUPERFAMILY SSF55174 31 124 2.21E-13 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 PANTHER PTHR32282 672 751 5.9E-293 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 PANTHER PTHR32282 2 310 5.9E-293 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 PANTHER PTHR32282 767 844 5.9E-293 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 610 6.0E-25 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 PANTHER PTHR32282:SF5 672 751 5.9E-293 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 PANTHER PTHR32282:SF5 767 844 5.9E-293 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 PANTHER PTHR32282:SF5 2 310 5.9E-293 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 Pfam PF00912 Transglycosylase 55 229 5.7E-65 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 4.4E-31 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 Gene3D G3DSA:2.40.50.140 347 421 1.7E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 SUPERFAMILY SSF56601 422 610 3.5E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 SUPERFAMILY SSF56601 211 233 3.5E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 SUPERFAMILY SSF56601 672 833 3.5E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 SUPERFAMILY SSF56601 262 313 3.5E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 Gene3D G3DSA:3.40.710.10 422 611 1.5E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 Gene3D G3DSA:3.40.710.10 673 832 1.5E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 Gene3D G3DSA:3.40.710.10 233 313 1.5E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 PANTHER PTHR32282:SF5 421 612 5.9E-293 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 PANTHER PTHR32282 421 612 5.9E-293 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 785 4.1E-172 T 22-04-2016 YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 SUPERFAMILY SSF53955 43 257 6.47E-80 T 22-04-2016 IPR023346 Lysozyme-like domain YPO0145 7b78db8a6bc37e8184a63d589b1355f9 851 Gene3D G3DSA:1.10.3810.10 55 232 9.5E-76 T 22-04-2016 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 PANTHER PTHR11817 1 479 0.0 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF50800 74 168 3.31E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YPO2064 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:2.40.33.10 77 170 5.6E-27 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:3.40.1380.20 332 479 1.8E-37 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 PANTHER PTHR11817:SF17 1 479 0.0 T 22-04-2016 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:3.20.20.60 172 331 1.9E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 Gene3D G3DSA:3.20.20.60 6 76 1.9E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 6.1E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 5.5E-131 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 1.7E-169 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF52935 329 479 3.14E-38 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF51621 171 344 1.61E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2064 ab68619eae173fe7b6c701eff9be696b 480 SUPERFAMILY SSF51621 4 79 1.61E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2845 6ce092debab657de7404ac7b972afee5 501 Gene3D G3DSA:3.40.640.10 169 384 2.1E-58 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO2845 6ce092debab657de7404ac7b972afee5 501 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 88 4.1E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO2845 6ce092debab657de7404ac7b972afee5 501 SUPERFAMILY SSF53383 135 493 1.28E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO2845 6ce092debab657de7404ac7b972afee5 501 Pfam PF00155 Aminotransferase class I and II 149 460 1.5E-24 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO2845 6ce092debab657de7404ac7b972afee5 501 PANTHER PTHR11751 131 494 2.6E-144 T 22-04-2016 YPO2845 6ce092debab657de7404ac7b972afee5 501 SMART SM00345 29 88 1.3E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO2845 6ce092debab657de7404ac7b972afee5 501 SUPERFAMILY SSF46785 26 90 5.07E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2845 6ce092debab657de7404ac7b972afee5 501 PANTHER PTHR11751:SF10 131 494 2.6E-144 T 22-04-2016 YPO2845 6ce092debab657de7404ac7b972afee5 501 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 3.6E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO2845 6ce092debab657de7404ac7b972afee5 501 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 3.6E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO2845 6ce092debab657de7404ac7b972afee5 501 Gene3D G3DSA:1.10.10.10 25 89 3.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1975 1a21f5f906d80dd6168f4a43831f74e6 190 PANTHER PTHR37943 1 190 4.9E-76 T 22-04-2016 YPO1975 1a21f5f906d80dd6168f4a43831f74e6 190 Gene3D G3DSA:2.60.120.10 11 115 9.6E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO1975 1a21f5f906d80dd6168f4a43831f74e6 190 Pfam PF05962 HutD 14 167 1.1E-50 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves YPO1975 1a21f5f906d80dd6168f4a43831f74e6 190 PANTHER PTHR37943:SF1 1 190 4.9E-76 T 22-04-2016 YPO1975 1a21f5f906d80dd6168f4a43831f74e6 190 SUPERFAMILY SSF51182 1 187 2.67E-53 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 37.844 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 SUPERFAMILY SSF103263 4 351 4.45E-149 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 PIRSF PIRSF001456 3 358 2.5E-142 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 Pfam PF01264 Chorismate synthase 10 345 2.6E-143 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.9E-140 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 Gene3D G3DSA:3.60.150.10 10 352 1.5E-160 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2751 f73ef09bb719d60dd44f64f1c0bf22ef 361 PANTHER PTHR21085 2 352 4.2E-225 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 Gene3D G3DSA:1.10.230.10 280 372 1.9E-43 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 PIRSF PIRSF001369 37 426 1.2E-174 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 Gene3D G3DSA:1.10.580.10 51 279 1.4E-96 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 SUPERFAMILY SSF48256 3 421 2.09E-168 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 Pfam PF00285 Citrate synthase, C-terminal domain 45 409 1.3E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 PANTHER PTHR11739 38 420 3.5E-206 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 358 374 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 378 392 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 295 315 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 218 233 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 164 177 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 PRINTS PR00143 Citrate synthase signature 240 268 2.0E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YPO1108 af25d3b5e81b7bad8e7fdcf0044cd578 426 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 420 1.2E-235 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 YPO3990 e34e7f18596d8460cd6e10c838b795f1 314 SUPERFAMILY SSF53613 1 307 2.65E-73 T 22-04-2016 IPR029056 Ribokinase-like YPO3990 e34e7f18596d8460cd6e10c838b795f1 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 262 275 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPO3990 e34e7f18596d8460cd6e10c838b795f1 314 PANTHER PTHR10584:SF57 1 308 2.6E-189 T 22-04-2016 YPO3990 e34e7f18596d8460cd6e10c838b795f1 314 Gene3D G3DSA:3.40.1190.20 1 305 3.6E-75 T 22-04-2016 IPR029056 Ribokinase-like YPO3990 e34e7f18596d8460cd6e10c838b795f1 314 Pfam PF00294 pfkB family carbohydrate kinase 4 308 2.3E-68 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPO3990 e34e7f18596d8460cd6e10c838b795f1 314 PANTHER PTHR10584 1 308 2.6E-189 T 22-04-2016 YPO2977 93073811fce8a5b3985d266f1434d9c1 323 Hamap MF_00524 Glucokinase [glk]. 2 316 39.586 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YPO2977 93073811fce8a5b3985d266f1434d9c1 323 TIGRFAM TIGR00749 glk: glucokinase 6 310 7.1E-139 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YPO2977 93073811fce8a5b3985d266f1434d9c1 323 PANTHER PTHR30514 1 320 5.9E-124 T 22-04-2016 YPO2977 93073811fce8a5b3985d266f1434d9c1 323 Gene3D G3DSA:3.40.367.20 100 299 2.6E-77 T 22-04-2016 YPO2977 93073811fce8a5b3985d266f1434d9c1 323 SUPERFAMILY SSF53067 4 318 1.02E-64 T 22-04-2016 YPO2977 93073811fce8a5b3985d266f1434d9c1 323 Pfam PF02685 Glucokinase 6 315 2.2E-126 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YPO2977 93073811fce8a5b3985d266f1434d9c1 323 PANTHER PTHR30514:SF0 1 320 5.9E-124 T 22-04-2016 YPO0592 0bce5cd325b89594b7c07953deb16461 499 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 167 179 - T 22-04-2016 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 YPO0592 0bce5cd325b89594b7c07953deb16461 499 SUPERFAMILY SSF56112 145 268 7.01E-16 T 22-04-2016 IPR011009 Protein kinase-like domain YPO0592 0bce5cd325b89594b7c07953deb16461 499 Pfam PF00069 Protein kinase domain 152 314 4.0E-10 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 YPO0592 0bce5cd325b89594b7c07953deb16461 499 Gene3D G3DSA:1.10.510.10 150 341 1.4E-14 T 22-04-2016 YPO0592 0bce5cd325b89594b7c07953deb16461 499 SMART SM00220 16 352 0.0084 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 Gene3D G3DSA:3.40.190.10 112 189 6.2E-13 T 22-04-2016 YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 SUPERFAMILY SSF46785 20 103 3.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 SUPERFAMILY SSF53850 111 310 5.97E-24 T 22-04-2016 YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 PANTHER PTHR30537 17 323 8.8E-151 T 22-04-2016 YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 Gene3D G3DSA:3.40.190.10 190 275 1.2E-13 T 22-04-2016 YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 Pfam PF03466 LysR substrate binding domain 111 306 2.6E-20 T 22-04-2016 IPR005119 LysR, substrate-binding YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 PANTHER PTHR30537:SF8 17 323 8.8E-151 T 22-04-2016 YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 Gene3D G3DSA:1.10.10.10 20 104 1.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 81 1.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 9.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 9.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2458 4494aed2421a8ddc8937db4b437f1e7c 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2352 416c979727886b6d0da014313ab6a5f6 342 Pfam PF02954 Bacterial regulatory protein, Fis family 290 326 2.2E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO2352 416c979727886b6d0da014313ab6a5f6 342 Pfam PF00158 Sigma-54 interaction domain 9 170 4.9E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPO2352 416c979727886b6d0da014313ab6a5f6 342 SMART SM00382 28 171 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2352 416c979727886b6d0da014313ab6a5f6 342 PANTHER PTHR32071 1 340 2.4E-243 T 22-04-2016 YPO2352 416c979727886b6d0da014313ab6a5f6 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPO2352 416c979727886b6d0da014313ab6a5f6 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO2352 416c979727886b6d0da014313ab6a5f6 342 Gene3D G3DSA:1.10.8.60 180 250 4.5E-22 T 22-04-2016 YPO2352 416c979727886b6d0da014313ab6a5f6 342 Gene3D G3DSA:1.10.10.60 281 329 7.6E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2352 416c979727886b6d0da014313ab6a5f6 342 SUPERFAMILY SSF46689 222 329 1.57E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2352 416c979727886b6d0da014313ab6a5f6 342 PANTHER PTHR32071:SF38 1 340 2.4E-243 T 22-04-2016 YPO2352 416c979727886b6d0da014313ab6a5f6 342 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 327 3.4E-163 T 22-04-2016 IPR014317 Transcription activator PspF YPO2352 416c979727886b6d0da014313ab6a5f6 342 SUPERFAMILY SSF52540 8 245 2.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2352 416c979727886b6d0da014313ab6a5f6 342 Gene3D G3DSA:3.40.50.300 3 179 1.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2352 416c979727886b6d0da014313ab6a5f6 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 310 330 5.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO2352 416c979727886b6d0da014313ab6a5f6 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 293 310 5.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 SMART SM00304 216 268 1.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 PANTHER PTHR32089 35 519 1.7E-207 T 22-04-2016 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 Pfam PF00672 HAMP domain 196 264 5.6E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 PANTHER PTHR32089:SF48 35 519 1.7E-207 T 22-04-2016 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 SUPERFAMILY SSF47170 25 182 4.71E-50 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 SMART SM00319 44 182 4.2E-39 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 1.1E-66 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 SUPERFAMILY SSF58104 236 522 1.28E-76 T 22-04-2016 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 Gene3D G3DSA:1.10.287.950 285 488 4.2E-63 T 22-04-2016 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 Pfam PF02203 Tar ligand binding domain homologue 1 175 2.7E-52 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 Gene3D G3DSA:1.20.120.30 35 181 3.4E-53 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPO1675 7051a9b78df445ee68b961d7a0cb28c6 557 SMART SM00283 269 516 3.2E-94 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO0445 68ffb46ab2ea72758e75001b557a0855 376 Pfam PF13776 Domain of unknown function (DUF4172) 6 87 2.0E-26 T 22-04-2016 IPR025230 Domain of unknown function DUF4172 YPO0445 68ffb46ab2ea72758e75001b557a0855 376 PANTHER PTHR13504 1 376 7.0E-217 T 22-04-2016 YPO0445 68ffb46ab2ea72758e75001b557a0855 376 Gene3D G3DSA:1.10.10.10 304 367 3.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0445 68ffb46ab2ea72758e75001b557a0855 376 Pfam PF02661 Fic/DOC family 117 227 9.1E-17 T 22-04-2016 IPR003812 Fido domain YPO0445 68ffb46ab2ea72758e75001b557a0855 376 PANTHER PTHR13504:SF33 1 376 7.0E-217 T 22-04-2016 YPO0445 68ffb46ab2ea72758e75001b557a0855 376 Gene3D G3DSA:1.10.3290.10 27 301 4.0E-57 T 22-04-2016 IPR003812 Fido domain YPO0445 68ffb46ab2ea72758e75001b557a0855 376 SUPERFAMILY SSF140931 103 298 9.42E-39 T 22-04-2016 IPR003812 Fido domain YPO0440 3ab11b093557d61d85ab9f5efb17e1c2 239 Pfam PF01048 Phosphorylase superfamily 15 219 2.6E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO0440 3ab11b093557d61d85ab9f5efb17e1c2 239 SUPERFAMILY SSF53167 3 234 1.31E-93 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO0440 3ab11b093557d61d85ab9f5efb17e1c2 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.8E-124 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YPO0440 3ab11b093557d61d85ab9f5efb17e1c2 239 PANTHER PTHR21234 3 234 1.2E-84 T 22-04-2016 IPR018017 Nucleoside phosphorylase YPO0440 3ab11b093557d61d85ab9f5efb17e1c2 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YPO0440 3ab11b093557d61d85ab9f5efb17e1c2 239 Gene3D G3DSA:3.40.50.1580 10 233 4.6E-84 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO0440 3ab11b093557d61d85ab9f5efb17e1c2 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.985 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YPO0440 3ab11b093557d61d85ab9f5efb17e1c2 239 PANTHER PTHR21234:SF8 3 234 1.2E-84 T 22-04-2016 YPO0164 3311a9853ba116e0bbfd58d71bdee97f 686 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 79 686 5.4E-248 T 22-04-2016 IPR010100 TonB-dependent copper receptor YPO0164 3311a9853ba116e0bbfd58d71bdee97f 686 SUPERFAMILY SSF56935 65 686 2.42E-84 T 22-04-2016 YPO0164 3311a9853ba116e0bbfd58d71bdee97f 686 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 178 4.8E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO0164 3311a9853ba116e0bbfd58d71bdee97f 686 PANTHER PTHR32552 4 686 0.0 T 22-04-2016 YPO0164 3311a9853ba116e0bbfd58d71bdee97f 686 PANTHER PTHR32552:SF12 4 686 0.0 T 22-04-2016 YPO0164 3311a9853ba116e0bbfd58d71bdee97f 686 Gene3D G3DSA:2.40.170.20 182 686 1.6E-65 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO0164 3311a9853ba116e0bbfd58d71bdee97f 686 Gene3D G3DSA:2.170.130.10 79 181 3.7E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO0164 3311a9853ba116e0bbfd58d71bdee97f 686 Pfam PF00593 TonB dependent receptor 442 685 1.0E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PANTHER PTHR32195 11 410 9.8E-212 T 22-04-2016 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 6.0E-148 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 3.2E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 Pfam PF03222 Tryptophan/tyrosine permease family 11 402 1.0E-144 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YPO1285 58774cf9ab7f002db0eb4c47bed7e082 414 PANTHER PTHR32195:SF18 11 410 9.8E-212 T 22-04-2016 YPO0197 d88428e496b37c12194a938287748596 131 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 4 131 39.481 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 YPO0197 d88428e496b37c12194a938287748596 131 SUPERFAMILY SSF75169 1 131 6.67E-37 T 22-04-2016 IPR027396 DsrEFH-like YPO0197 d88428e496b37c12194a938287748596 131 Pfam PF02635 DsrE/DsrF-like family 5 131 7.6E-28 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein YPO0197 d88428e496b37c12194a938287748596 131 Gene3D G3DSA:3.40.1260.10 5 131 1.1E-29 T 22-04-2016 IPR027396 DsrEFH-like YPO0197 d88428e496b37c12194a938287748596 131 PANTHER PTHR34874 4 131 9.5E-65 T 22-04-2016 YPO0197 d88428e496b37c12194a938287748596 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 1.2E-54 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 YPO0197 d88428e496b37c12194a938287748596 131 PANTHER PTHR34874:SF1 4 131 9.5E-65 T 22-04-2016 YPO0840 416246d98281be2c7ca2092d6cf2cdaa 352 PANTHER PTHR33886:SF2 1 352 1.2E-132 T 22-04-2016 YPO0840 416246d98281be2c7ca2092d6cf2cdaa 352 Gene3D G3DSA:1.50.10.10 4 351 1.2E-83 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 YPO0840 416246d98281be2c7ca2092d6cf2cdaa 352 Pfam PF07470 Glycosyl Hydrolase Family 88 41 351 6.3E-72 T 22-04-2016 IPR010905 Glycosyl hydrolase, family 88 YPO0840 416246d98281be2c7ca2092d6cf2cdaa 352 SUPERFAMILY SSF48208 36 351 2.04E-52 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 YPO0840 416246d98281be2c7ca2092d6cf2cdaa 352 PANTHER PTHR33886 1 352 1.2E-132 T 22-04-2016 YPO1845 4fc72622cf4efc4f4b09acdde9e02159 330 Gene3D G3DSA:3.40.50.1100 113 327 2.3E-67 T 22-04-2016 YPO1845 4fc72622cf4efc4f4b09acdde9e02159 330 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 2 330 63.733 T 22-04-2016 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 YPO1845 4fc72622cf4efc4f4b09acdde9e02159 330 PIRSF PIRSF006278 1 330 9.1E-95 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YPO1845 4fc72622cf4efc4f4b09acdde9e02159 330 PANTHER PTHR10314:SF105 1 319 7.2E-174 T 22-04-2016 YPO1845 4fc72622cf4efc4f4b09acdde9e02159 330 PANTHER PTHR10314 1 319 7.2E-174 T 22-04-2016 YPO1845 4fc72622cf4efc4f4b09acdde9e02159 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 318 2.4E-52 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO1845 4fc72622cf4efc4f4b09acdde9e02159 330 SUPERFAMILY SSF53686 8 328 3.14E-85 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO1845 4fc72622cf4efc4f4b09acdde9e02159 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 330 2.9E-126 T 22-04-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 YPO0631 0a683b50ba381f78349217e67d6553bb 310 Pfam PF03466 LysR substrate binding domain 89 293 1.0E-38 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0631 0a683b50ba381f78349217e67d6553bb 310 SUPERFAMILY SSF53850 89 295 5.07E-41 T 22-04-2016 YPO0631 0a683b50ba381f78349217e67d6553bb 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0631 0a683b50ba381f78349217e67d6553bb 310 PANTHER PTHR30537 1 310 2.0E-204 T 22-04-2016 YPO0631 0a683b50ba381f78349217e67d6553bb 310 PANTHER PTHR30537:SF17 1 310 2.0E-204 T 22-04-2016 YPO0631 0a683b50ba381f78349217e67d6553bb 310 Gene3D G3DSA:1.10.10.10 4 84 3.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0631 0a683b50ba381f78349217e67d6553bb 310 SUPERFAMILY SSF46785 4 84 1.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0631 0a683b50ba381f78349217e67d6553bb 310 Gene3D G3DSA:3.40.190.10 177 261 1.5E-9 T 22-04-2016 YPO0631 0a683b50ba381f78349217e67d6553bb 310 Gene3D G3DSA:3.40.190.10 92 176 3.6E-22 T 22-04-2016 YPO1352 46bfab8c9a4c087cf9bdf9e6c85abb17 242 Gene3D G3DSA:3.40.50.300 3 234 3.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1352 46bfab8c9a4c087cf9bdf9e6c85abb17 242 SUPERFAMILY SSF52540 3 234 2.66E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1352 46bfab8c9a4c087cf9bdf9e6c85abb17 242 PANTHER PTHR24220:SF495 4 241 9.5E-175 T 22-04-2016 YPO1352 46bfab8c9a4c087cf9bdf9e6c85abb17 242 PANTHER PTHR24220 4 241 9.5E-175 T 22-04-2016 YPO1352 46bfab8c9a4c087cf9bdf9e6c85abb17 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1352 46bfab8c9a4c087cf9bdf9e6c85abb17 242 Pfam PF00005 ABC transporter 20 170 9.5E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1352 46bfab8c9a4c087cf9bdf9e6c85abb17 242 PIRSF PIRSF039085 1 242 4.8E-83 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPO1352 46bfab8c9a4c087cf9bdf9e6c85abb17 242 SMART SM00382 27 218 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3424 b15141bb76e44243fa6623cbcee147a6 302 SUPERFAMILY SSF51690 130 301 5.1E-57 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 YPO3424 b15141bb76e44243fa6623cbcee147a6 302 PANTHER PTHR32179 1 301 6.1E-132 T 22-04-2016 YPO3424 b15141bb76e44243fa6623cbcee147a6 302 Gene3D G3DSA:3.90.1170.20 19 150 2.9E-49 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 YPO3424 b15141bb76e44243fa6623cbcee147a6 302 Gene3D G3DSA:3.20.20.70 151 290 6.4E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3424 b15141bb76e44243fa6623cbcee147a6 302 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 300 1.3E-59 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 YPO3424 b15141bb76e44243fa6623cbcee147a6 302 PIRSF PIRSF006250 17 302 2.1E-103 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YPO3424 b15141bb76e44243fa6623cbcee147a6 302 SUPERFAMILY SSF54675 14 129 5.49E-32 T 22-04-2016 YPO3424 b15141bb76e44243fa6623cbcee147a6 302 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 128 3.3E-26 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 YPO3424 b15141bb76e44243fa6623cbcee147a6 302 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 301 2.8E-97 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 Pfam PF00990 Diguanylate cyclase, GGDEF domain 304 456 1.6E-24 T 22-04-2016 IPR000160 GGDEF domain YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 SUPERFAMILY SSF55073 306 462 3.14E-26 T 22-04-2016 IPR029787 Nucleotide cyclase YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 SMART SM00052 470 715 3.8E-96 T 22-04-2016 IPR001633 EAL domain YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 93 212 8.1E-58 T 22-04-2016 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 Pfam PF00672 HAMP domain 220 289 2.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 SMART SM00267 286 460 1.9E-26 T 22-04-2016 IPR000160 GGDEF domain YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 SUPERFAMILY SSF141868 475 722 1.57E-77 T 22-04-2016 IPR001633 EAL domain YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 PANTHER PTHR33121 424 718 2.8E-56 T 22-04-2016 YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 PANTHER PTHR33121 43 49 2.8E-56 T 22-04-2016 YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 Gene3D G3DSA:3.20.20.450 475 719 2.8E-80 T 22-04-2016 IPR001633 EAL domain YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 PANTHER PTHR33121:SF13 424 718 2.8E-56 T 22-04-2016 YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 PANTHER PTHR33121:SF13 43 49 2.8E-56 T 22-04-2016 YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 Pfam PF00563 EAL domain 476 710 8.3E-63 T 22-04-2016 IPR001633 EAL domain YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 Gene3D G3DSA:3.30.70.270 304 466 1.9E-30 T 22-04-2016 YPO3996 7c92320d88a409cb1c486c254ec5e6be 728 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 301 460 5.5E-15 T 22-04-2016 IPR000160 GGDEF domain YPO0950 51cd6ebe7236f4bb3339fc0684b53e87 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 5.9E-44 T 22-04-2016 IPR007416 Protein of unknown function DUF469 YPO0950 51cd6ebe7236f4bb3339fc0684b53e87 108 PANTHER PTHR38778:SF1 2 108 1.0E-56 T 22-04-2016 YPO0950 51cd6ebe7236f4bb3339fc0684b53e87 108 PANTHER PTHR38778 2 108 1.0E-56 T 22-04-2016 YPO1683 75bdb35d10919dfb13f918fab5ca9b2a 254 SMART SM00644 7 158 1.9E-29 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO1683 75bdb35d10919dfb13f918fab5ca9b2a 254 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 158 6.5E-15 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO1683 75bdb35d10919dfb13f918fab5ca9b2a 254 PANTHER PTHR30417:SF5 1 254 1.3E-185 T 22-04-2016 YPO1683 75bdb35d10919dfb13f918fab5ca9b2a 254 SUPERFAMILY SSF55846 9 174 1.09E-45 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO1683 75bdb35d10919dfb13f918fab5ca9b2a 254 PANTHER PTHR30417 1 254 1.3E-185 T 22-04-2016 YPO1683 75bdb35d10919dfb13f918fab5ca9b2a 254 Gene3D G3DSA:3.40.80.10 2 177 1.8E-54 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO1683 75bdb35d10919dfb13f918fab5ca9b2a 254 SUPERFAMILY SSF47090 174 254 5.69E-22 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPO0651 65d7b4bb395e33aea26d012dffe96dd0 207 SMART SM00287 23 89 5.7E-12 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type YPO0651 65d7b4bb395e33aea26d012dffe96dd0 207 PIRSF PIRSF006158 1 205 1.7E-69 T 22-04-2016 IPR016476 SH3 domain protein YPO0651 65d7b4bb395e33aea26d012dffe96dd0 207 Pfam PF08239 Bacterial SH3 domain 34 81 9.8E-9 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type YPO0651 65d7b4bb395e33aea26d012dffe96dd0 207 PANTHER PTHR23164 1 207 3.8E-56 T 22-04-2016 YPO0651 65d7b4bb395e33aea26d012dffe96dd0 207 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 1.3E-52 T 22-04-2016 IPR016476 SH3 domain protein YPO1547 250fa86586b8980a76e027ca0d7582b3 382 SUPERFAMILY SSF53383 5 353 3.81E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1547 250fa86586b8980a76e027ca0d7582b3 382 PANTHER PTHR11751 9 352 7.3E-104 T 22-04-2016 YPO1547 250fa86586b8980a76e027ca0d7582b3 382 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 353 7.7E-122 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 YPO1547 250fa86586b8980a76e027ca0d7582b3 382 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 356 55.503 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 YPO1547 250fa86586b8980a76e027ca0d7582b3 382 Pfam PF00155 Aminotransferase class I and II 47 352 6.2E-61 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO1547 250fa86586b8980a76e027ca0d7582b3 382 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 YPO1547 250fa86586b8980a76e027ca0d7582b3 382 PANTHER PTHR11751:SF398 9 352 7.3E-104 T 22-04-2016 YPO1547 250fa86586b8980a76e027ca0d7582b3 382 Gene3D G3DSA:3.40.640.10 50 255 1.2E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1547 250fa86586b8980a76e027ca0d7582b3 382 Gene3D G3DSA:3.90.1150.10 256 353 4.7E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO3769 9dbb47bbdd310327b5a6a75beff96e1a 498 Gene3D G3DSA:1.20.5.570 458 494 7.5E-19 T 22-04-2016 YPO3769 9dbb47bbdd310327b5a6a75beff96e1a 498 SUPERFAMILY SSF50475 6 325 4.32E-128 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPO3769 9dbb47bbdd310327b5a6a75beff96e1a 498 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 2.0E-187 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YPO3769 9dbb47bbdd310327b5a6a75beff96e1a 498 PANTHER PTHR30108:SF1 1 497 6.3E-294 T 22-04-2016 YPO3769 9dbb47bbdd310327b5a6a75beff96e1a 498 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.86 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YPO3769 9dbb47bbdd310327b5a6a75beff96e1a 498 PANTHER PTHR30108 1 497 6.3E-294 T 22-04-2016 YPO3769 9dbb47bbdd310327b5a6a75beff96e1a 498 SUPERFAMILY SSF143968 326 489 3.4E-68 T 22-04-2016 YPO3769 9dbb47bbdd310327b5a6a75beff96e1a 498 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 2.4E-172 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YPO3769 9dbb47bbdd310327b5a6a75beff96e1a 498 Gene3D G3DSA:3.40.1670.10 340 457 1.7E-55 T 22-04-2016 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.3E-45 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 Gene3D G3DSA:3.40.50.720 1 145 1.2E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 2.2E-51 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 SUPERFAMILY SSF51735 1 145 5.31E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 PANTHER PTHR11540:SF22 1 312 6.1E-241 T 22-04-2016 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 PANTHER PTHR11540 1 312 6.1E-241 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 PIRSF PIRSF000102 1 310 2.8E-60 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 59.859 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 9.8E-137 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 SUPERFAMILY SSF56327 146 311 8.65E-43 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YPO3516 0bf707f17b3a3a3db68d6ed5f586e754 312 Gene3D G3DSA:3.90.110.10 147 311 1.4E-63 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YPO0363 609c786298cdb634b96e56242afffe04 1119 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 961 995 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YPO0363 609c786298cdb634b96e56242afffe04 1119 Gene3D G3DSA:3.30.70.100 1002 1086 1.3E-6 T 22-04-2016 YPO0363 609c786298cdb634b96e56242afffe04 1119 PANTHER PTHR30347 1 1110 0.0 T 22-04-2016 YPO0363 609c786298cdb634b96e56242afffe04 1119 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 492 828 5.9E-115 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPO0363 609c786298cdb634b96e56242afffe04 1119 SUPERFAMILY SSF82861 847 930 4.84E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YPO0363 609c786298cdb634b96e56242afffe04 1119 SUPERFAMILY SSF50182 932 997 9.81E-17 T 22-04-2016 IPR010920 LSM domain YPO0363 609c786298cdb634b96e56242afffe04 1119 Pfam PF12795 Mechanosensitive ion channel porin domain 42 270 5.2E-63 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain YPO0363 609c786298cdb634b96e56242afffe04 1119 Gene3D G3DSA:2.30.30.60 947 996 1.3E-16 T 22-04-2016 YPO0363 609c786298cdb634b96e56242afffe04 1119 Pfam PF00924 Mechanosensitive ion channel 889 1087 1.1E-51 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YPO0363 609c786298cdb634b96e56242afffe04 1119 SUPERFAMILY SSF82689 999 1094 3.79E-14 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YPO0363 609c786298cdb634b96e56242afffe04 1119 PANTHER PTHR30347:SF0 1 1110 0.0 T 22-04-2016 YPO1540 afc53b3e7143e58ba863fec0e28986bc 297 PANTHER PTHR22572:SF118 5 296 4.0E-219 T 22-04-2016 YPO1540 afc53b3e7143e58ba863fec0e28986bc 297 Gene3D G3DSA:3.90.550.10 3 284 2.9E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1540 afc53b3e7143e58ba863fec0e28986bc 297 Pfam PF00483 Nucleotidyl transferase 5 252 6.7E-22 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPO1540 afc53b3e7143e58ba863fec0e28986bc 297 SUPERFAMILY SSF53448 1 289 4.96E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1540 afc53b3e7143e58ba863fec0e28986bc 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 273 3.6E-102 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 YPO1540 afc53b3e7143e58ba863fec0e28986bc 297 PANTHER PTHR22572 5 296 4.0E-219 T 22-04-2016 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 2.7E-50 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.54.20 130 187 1.2E-20 T 22-04-2016 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF02824 TGS domain 4 61 1.6E-11 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.980.10 188 223 3.2E-40 T 22-04-2016 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.980.10 66 129 3.2E-40 T 22-04-2016 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 PANTHER PTHR11451 1 642 0.0 T 22-04-2016 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 4.0E-242 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF55186 63 241 7.19E-64 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF81271 3 61 1.85E-16 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 SMART SM00863 170 219 2.6E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF03129 Anticodon binding domain 541 628 4.3E-21 T 22-04-2016 IPR004154 Anticodon-binding YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 PANTHER PTHR11451:SF31 1 642 0.0 T 22-04-2016 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.10.20.30 1 64 7.5E-24 T 22-04-2016 IPR012675 Beta-grasp domain YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF55681 243 525 5.84E-96 T 22-04-2016 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.002 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.30.930.10 242 530 2.6E-121 T 22-04-2016 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 SUPERFAMILY SSF52954 529 636 1.15E-31 T 22-04-2016 IPR004154 Anticodon-binding YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.9E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 Gene3D G3DSA:3.40.50.800 532 640 4.0E-36 T 22-04-2016 IPR004154 Anticodon-binding YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPO2433 f861d3aa4b80df4efebdb340763c66f5 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YPO0831 a470ebf96bb16239c575091472721c65 258 SUPERFAMILY SSF100950 76 237 3.63E-31 T 22-04-2016 YPO0831 a470ebf96bb16239c575091472721c65 258 Gene3D G3DSA:1.10.10.10 4 54 5.3E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0831 a470ebf96bb16239c575091472721c65 258 SMART SM01134 74 235 4.0E-67 T 22-04-2016 YPO0831 a470ebf96bb16239c575091472721c65 258 Pfam PF00455 DeoR C terminal sensor domain 77 234 1.7E-51 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPO0831 a470ebf96bb16239c575091472721c65 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 2.1E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO0831 a470ebf96bb16239c575091472721c65 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 2.1E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO0831 a470ebf96bb16239c575091472721c65 258 PANTHER PTHR30363:SF11 1 257 3.3E-139 T 22-04-2016 YPO0831 a470ebf96bb16239c575091472721c65 258 PANTHER PTHR30363 1 257 3.3E-139 T 22-04-2016 YPO0831 a470ebf96bb16239c575091472721c65 258 SUPERFAMILY SSF46785 6 59 1.63E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0831 a470ebf96bb16239c575091472721c65 258 Pfam PF08220 DeoR-like helix-turn-helix domain 7 58 8.2E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO0831 a470ebf96bb16239c575091472721c65 258 Gene3D G3DSA:3.40.50.1360 79 217 1.9E-14 T 22-04-2016 YPO0831 a470ebf96bb16239c575091472721c65 258 SMART SM00420 7 59 3.4E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1803 5e97ff29b8a66f96574776c1d5d1ad3f 209 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 4.2E-34 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO1803 5e97ff29b8a66f96574776c1d5d1ad3f 209 SUPERFAMILY SSF117143 77 189 9.81E-16 T 22-04-2016 YPO1803 5e97ff29b8a66f96574776c1d5d1ad3f 209 PANTHER PTHR30435:SF18 1 208 6.5E-94 T 22-04-2016 YPO1803 5e97ff29b8a66f96574776c1d5d1ad3f 209 PANTHER PTHR30435 1 208 6.5E-94 T 22-04-2016 YPO1803 5e97ff29b8a66f96574776c1d5d1ad3f 209 Pfam PF00460 Flagella basal body rod protein 5 35 3.8E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO0378 02a345d6601b0936c5115f56af628db9 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.906 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPO0378 02a345d6601b0936c5115f56af628db9 432 Gene3D G3DSA:3.40.440.10 196 266 4.6E-71 T 22-04-2016 YPO0378 02a345d6601b0936c5115f56af628db9 432 Gene3D G3DSA:3.40.440.10 3 94 4.6E-71 T 22-04-2016 YPO0378 02a345d6601b0936c5115f56af628db9 432 PANTHER PTHR11846 1 429 3.9E-263 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPO0378 02a345d6601b0936c5115f56af628db9 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 1.6E-202 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPO0378 02a345d6601b0936c5115f56af628db9 432 SMART SM00788 4 425 8.2E-298 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPO0378 02a345d6601b0936c5115f56af628db9 432 Gene3D G3DSA:1.10.300.10 103 195 6.9E-37 T 22-04-2016 YPO0378 02a345d6601b0936c5115f56af628db9 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPO0378 02a345d6601b0936c5115f56af628db9 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 2.7E-177 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YPO0378 02a345d6601b0936c5115f56af628db9 432 Gene3D G3DSA:3.90.170.10 267 426 4.5E-67 T 22-04-2016 YPO0378 02a345d6601b0936c5115f56af628db9 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 YPO0378 02a345d6601b0936c5115f56af628db9 432 SUPERFAMILY SSF52540 3 431 3.72E-178 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 SUPERFAMILY SSF69864 190 442 8.63E-81 T 22-04-2016 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 2.9E-166 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 452 74.134 T 22-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 Gene3D G3DSA:1.10.287.400 377 439 3.3E-35 T 22-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 PANTHER PTHR11587 1 425 7.6E-181 T 22-04-2016 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 Gene3D G3DSA:3.90.1260.10 175 372 1.5E-63 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 Pfam PF00764 Arginosuccinate synthase 16 409 2.0E-58 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 PANTHER PTHR11587:SF2 1 425 7.6E-181 T 22-04-2016 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 SUPERFAMILY SSF52402 3 186 7.68E-35 T 22-04-2016 YPO1570 c4f97b23a6c00bde0c8ada663bc2cc16 455 Gene3D G3DSA:3.40.50.620 4 174 1.5E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3064 0d3eb05397485affc534fea1b7a3d0f7 157 Gene3D G3DSA:3.40.30.10 3 155 2.4E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3064 0d3eb05397485affc534fea1b7a3d0f7 157 PANTHER PTHR10681 1 139 2.9E-51 T 22-04-2016 YPO3064 0d3eb05397485affc534fea1b7a3d0f7 157 Pfam PF00578 AhpC/TSA family 8 135 9.0E-40 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 YPO3064 0d3eb05397485affc534fea1b7a3d0f7 157 SUPERFAMILY SSF52833 4 155 3.96E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3064 0d3eb05397485affc534fea1b7a3d0f7 157 PIRSF PIRSF000239 2 147 1.6E-17 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 YPO0500 0b587fb496eee60a7a7cbce4ebd9bfc2 186 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 4.0E-55 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO0500 0b587fb496eee60a7a7cbce4ebd9bfc2 186 PIRSF PIRSF028301 2 177 5.0E-63 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO0500 0b587fb496eee60a7a7cbce4ebd9bfc2 186 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 13 163 5.7E-55 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO0500 0b587fb496eee60a7a7cbce4ebd9bfc2 186 PANTHER PTHR35850:SF1 2 177 8.3E-114 T 22-04-2016 YPO0500 0b587fb496eee60a7a7cbce4ebd9bfc2 186 PANTHER PTHR35850 2 177 8.3E-114 T 22-04-2016 YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SUPERFAMILY SSF51126 64 363 5.96E-48 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 2.6E-4 T 22-04-2016 IPR024973 ESPR domain YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 816 840 6100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 1395 1419 6300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 1159 1180 3300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 999 1040 690.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 1533 1554 4300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 1719 1743 4900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 1568 1589 5900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 1328 1372 10000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 777 809 3000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 1673 1697 93.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 625 646 990.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 557 593 4200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00710 210 232 9100.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 104 176 3.0E-25 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 Pfam PF05860 haemagglutination activity domain 90 178 1.4E-22 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 Gene3D G3DSA:2.160.20.10 105 356 5.3E-21 T 22-04-2016 IPR012334 Pectin lyase fold YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 PANTHER PTHR12338 2 307 0.0 T 22-04-2016 YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 PANTHER PTHR12338 336 1907 0.0 T 22-04-2016 YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 SMART SM00912 70 182 7.1E-37 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 PANTHER PTHR12338:SF6 2 307 0.0 T 22-04-2016 YPO3247 3c31374a8645782fb6ce8dabbf34f9e6 1910 PANTHER PTHR12338:SF6 336 1907 0.0 T 22-04-2016 YPO1293 144f5d8e9c384622a3980269bc9c2707 362 PANTHER PTHR32196:SF41 25 350 6.7E-216 T 22-04-2016 YPO1293 144f5d8e9c384622a3980269bc9c2707 362 Pfam PF13407 Periplasmic binding protein domain 41 303 8.0E-46 T 22-04-2016 IPR025997 Periplasmic binding protein YPO1293 144f5d8e9c384622a3980269bc9c2707 362 Gene3D G3DSA:3.40.50.2300 33 147 1.3E-20 T 22-04-2016 YPO1293 144f5d8e9c384622a3980269bc9c2707 362 Gene3D G3DSA:3.40.50.2300 148 345 2.4E-30 T 22-04-2016 YPO1293 144f5d8e9c384622a3980269bc9c2707 362 SUPERFAMILY SSF53822 38 345 4.07E-52 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO1293 144f5d8e9c384622a3980269bc9c2707 362 PANTHER PTHR32196 25 350 6.7E-216 T 22-04-2016 YPO0848 03927c34ec72bc78150b59216212fc5c 792 Pfam PF01055 Glycosyl hydrolases family 31 239 683 1.2E-114 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 YPO0848 03927c34ec72bc78150b59216212fc5c 792 Pfam PF17137 Domain of unknown function (DUF5110) 701 768 9.5E-9 T 22-04-2016 IPR033403 Domain of unknown function DUF5110 YPO0848 03927c34ec72bc78150b59216212fc5c 792 SUPERFAMILY SSF51011 598 679 4.75E-19 T 22-04-2016 YPO0848 03927c34ec72bc78150b59216212fc5c 792 SUPERFAMILY SSF74650 2 244 6.28E-47 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YPO0848 03927c34ec72bc78150b59216212fc5c 792 PANTHER PTHR22762:SF7 18 789 3.6E-296 T 22-04-2016 YPO0848 03927c34ec72bc78150b59216212fc5c 792 SUPERFAMILY SSF51445 248 595 2.83E-66 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO0848 03927c34ec72bc78150b59216212fc5c 792 Pfam PF13802 Galactose mutarotase-like 147 214 2.8E-22 T 22-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain YPO0848 03927c34ec72bc78150b59216212fc5c 792 PANTHER PTHR22762 18 789 3.6E-296 T 22-04-2016 YPO2061 354dd2ca3e9a889d232e83164216275f 318 Gene3D G3DSA:3.40.50.1980 13 190 1.6E-41 T 22-04-2016 YPO2061 354dd2ca3e9a889d232e83164216275f 318 Gene3D G3DSA:3.40.50.1980 207 318 5.1E-30 T 22-04-2016 YPO2061 354dd2ca3e9a889d232e83164216275f 318 SUPERFAMILY SSF53807 29 318 7.36E-78 T 22-04-2016 YPO2061 354dd2ca3e9a889d232e83164216275f 318 PANTHER PTHR30477:SF1 1 117 1.1E-107 T 22-04-2016 YPO2061 354dd2ca3e9a889d232e83164216275f 318 PANTHER PTHR30477:SF1 138 302 1.1E-107 T 22-04-2016 YPO2061 354dd2ca3e9a889d232e83164216275f 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 314 1.0E-56 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YPO2061 354dd2ca3e9a889d232e83164216275f 318 PANTHER PTHR30477 1 117 1.1E-107 T 22-04-2016 YPO2061 354dd2ca3e9a889d232e83164216275f 318 PANTHER PTHR30477 138 302 1.1E-107 T 22-04-2016 YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.5E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SMART SM00357 5 69 6.9E-33 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 SUPERFAMILY SSF50249 3 68 9.14E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 27 36 1.4E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 42 60 1.4E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PRINTS PR00050 Cold shock protein signature 6 21 1.4E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PIRSF PIRSF002599 1 69 5.8E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 PANTHER PTHR11544 1 69 2.7E-42 T 22-04-2016 YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 Gene3D G3DSA:2.40.50.140 4 67 7.9E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2595 95aceaef7fdfd0da6b65a2a8a1a6ebbd 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site YPO3422 51fc6a74d368285da16d71e6aca2e804 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 1.8E-161 T 22-04-2016 IPR031347 Protein AmpE YPO3422 51fc6a74d368285da16d71e6aca2e804 284 PANTHER PTHR38684 2 284 2.6E-111 T 22-04-2016 YPO3411 ea8731c8b9be5bfe0007cd274cf33322 296 SUPERFAMILY SSF53335 6 283 8.49E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3411 ea8731c8b9be5bfe0007cd274cf33322 296 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 YPO3411 ea8731c8b9be5bfe0007cd274cf33322 296 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.327 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 YPO3411 ea8731c8b9be5bfe0007cd274cf33322 296 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 4.2E-116 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 YPO3411 ea8731c8b9be5bfe0007cd274cf33322 296 PANTHER PTHR11558 7 283 8.2E-125 T 22-04-2016 YPO3411 ea8731c8b9be5bfe0007cd274cf33322 296 Gene3D G3DSA:3.40.50.150 56 283 2.0E-81 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3411 ea8731c8b9be5bfe0007cd274cf33322 296 Gene3D G3DSA:2.30.140.10 1 54 8.0E-19 T 22-04-2016 YPO3411 ea8731c8b9be5bfe0007cd274cf33322 296 Pfam PF01564 Spermine/spermidine synthase 9 241 4.1E-85 T 22-04-2016 YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 614 631 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 Gene3D G3DSA:2.170.130.10 38 160 1.6E-41 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 157 1.0E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 PANTHER PTHR30069 1 614 0.0 T 22-04-2016 YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 PANTHER PTHR30069:SF10 1 614 0.0 T 22-04-2016 YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 Gene3D G3DSA:2.40.170.20 165 631 1.4E-89 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 9 631 4.0E-230 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 SUPERFAMILY SSF56935 37 631 9.62E-123 T 22-04-2016 YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 8 631 36.349 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 YPO3910 e688d508d7ac3ff13cec90468cdf0a49 631 Pfam PF00593 TonB dependent receptor 406 630 1.2E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO2131 63ac1b3eb8ee3702652f0858d3856819 1067 PANTHER PTHR36251 1 1067 0.0 T 22-04-2016 YPO2131 63ac1b3eb8ee3702652f0858d3856819 1067 PANTHER PTHR36251:SF2 1 1067 0.0 T 22-04-2016 YPO2131 63ac1b3eb8ee3702652f0858d3856819 1067 Pfam PF09327 Domain of unknown function (DUF1983) 903 982 1.7E-24 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 YPO2131 63ac1b3eb8ee3702652f0858d3856819 1067 SMART SM00060 718 800 7.6 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPO2131 63ac1b3eb8ee3702652f0858d3856819 1067 SMART SM00060 619 700 3.0 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPO2131 63ac1b3eb8ee3702652f0858d3856819 1067 Pfam PF13550 Putative phage tail protein 341 503 2.1E-15 T 22-04-2016 IPR032876 Tip attachment protein J YPO2131 63ac1b3eb8ee3702652f0858d3856819 1067 SUPERFAMILY SSF49265 640 806 1.84E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPO2131 63ac1b3eb8ee3702652f0858d3856819 1067 Gene3D G3DSA:2.60.40.10 733 802 5.3E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPO3058 fa71567ddd4565abf0ee7c202bd0ae08 288 PANTHER PTHR30168 2 288 6.7E-157 T 22-04-2016 YPO3058 fa71567ddd4565abf0ee7c202bd0ae08 288 Pfam PF04228 Putative neutral zinc metallopeptidase 1 285 1.7E-133 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YPO1537 0527fb9e6f879148b9cf5afc20661540 753 Gene3D G3DSA:2.170.130.10 74 204 6.1E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO1537 0527fb9e6f879148b9cf5afc20661540 753 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 736 753 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YPO1537 0527fb9e6f879148b9cf5afc20661540 753 PANTHER PTHR32552 1 63 0.0 T 22-04-2016 YPO1537 0527fb9e6f879148b9cf5afc20661540 753 PANTHER PTHR32552 87 753 0.0 T 22-04-2016 YPO1537 0527fb9e6f879148b9cf5afc20661540 753 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 97 753 1.6E-101 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPO1537 0527fb9e6f879148b9cf5afc20661540 753 SUPERFAMILY SSF56935 87 753 1.41E-111 T 22-04-2016 YPO1537 0527fb9e6f879148b9cf5afc20661540 753 Gene3D G3DSA:2.40.170.20 211 753 1.8E-114 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1537 0527fb9e6f879148b9cf5afc20661540 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 95 197 6.0E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO1537 0527fb9e6f879148b9cf5afc20661540 753 PANTHER PTHR32552:SF37 1 63 0.0 T 22-04-2016 YPO1537 0527fb9e6f879148b9cf5afc20661540 753 PANTHER PTHR32552:SF37 87 753 0.0 T 22-04-2016 YPO1537 0527fb9e6f879148b9cf5afc20661540 753 Pfam PF00593 TonB dependent receptor 512 752 9.0E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1080 056469338fb23e76f5e42acc31aae2a3 239 Pfam PF08241 Methyltransferase domain 77 125 1.1E-8 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YPO1080 056469338fb23e76f5e42acc31aae2a3 239 PANTHER PTHR10108:SF836 77 219 2.2E-93 T 22-04-2016 YPO1080 056469338fb23e76f5e42acc31aae2a3 239 SUPERFAMILY SSF53335 77 182 2.87E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1080 056469338fb23e76f5e42acc31aae2a3 239 Gene3D G3DSA:3.40.50.150 66 206 7.8E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1080 056469338fb23e76f5e42acc31aae2a3 239 PANTHER PTHR10108 77 219 2.2E-93 T 22-04-2016 YPO2145 e72c6e215394c21158bb1595bef7fff9 511 Pfam PF04293 SpoVR like protein 20 451 3.3E-176 T 22-04-2016 IPR007390 Sporulation stage V, protein R YPO2145 e72c6e215394c21158bb1595bef7fff9 511 PANTHER PTHR30029:SF2 10 511 1.1E-247 T 22-04-2016 YPO2145 e72c6e215394c21158bb1595bef7fff9 511 PANTHER PTHR30029 10 511 1.1E-247 T 22-04-2016 YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 24 33 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 100 117 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 70 91 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 123 138 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 PRINTS PR00969 Pili chaperone signature 159 174 1.4E-34 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 PANTHER PTHR30251 1 231 1.6E-143 T 22-04-2016 YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 165 222 1.9E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 5.4E-40 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 Gene3D G3DSA:2.60.40.360 24 141 5.6E-46 T 22-04-2016 IPR008962 PapD-like YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 SUPERFAMILY SSF49354 24 141 3.92E-40 T 22-04-2016 IPR008962 PapD-like YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 PANTHER PTHR30251:SF6 1 231 1.6E-143 T 22-04-2016 YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 SUPERFAMILY SSF49584 148 234 3.92E-23 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO0699 73e810269fa608afe3a6d9cf82bcea7d 239 Gene3D G3DSA:2.60.40.1070 147 234 1.2E-27 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1629 fc7909797083acce8294977ebec8bb73 256 Gene3D G3DSA:3.30.420.40 1 131 5.3E-39 T 22-04-2016 YPO1629 fc7909797083acce8294977ebec8bb73 256 SUPERFAMILY SSF53067 1 245 5.19E-49 T 22-04-2016 YPO1629 fc7909797083acce8294977ebec8bb73 256 PANTHER PTHR18964:SF134 1 244 4.3E-129 T 22-04-2016 YPO1629 fc7909797083acce8294977ebec8bb73 256 PANTHER PTHR18964 1 244 4.3E-129 T 22-04-2016 YPO1629 fc7909797083acce8294977ebec8bb73 256 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family YPO1629 fc7909797083acce8294977ebec8bb73 256 Pfam PF00480 ROK family 2 243 4.2E-55 T 22-04-2016 IPR000600 ROK family YPO1629 fc7909797083acce8294977ebec8bb73 256 Gene3D G3DSA:3.30.420.40 132 244 5.6E-36 T 22-04-2016 YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 Pfam PF02222 ATP-grasp domain 88 254 3.0E-53 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 PANTHER PTHR11609:SF5 1 324 8.3E-109 T 22-04-2016 YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.796 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 PANTHER PTHR11609 1 324 8.3E-109 T 22-04-2016 YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 SUPERFAMILY SSF51246 278 353 2.2E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 324 3.0E-108 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 Gene3D G3DSA:3.40.50.20 1 69 1.7E-23 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 SUPERFAMILY SSF52440 2 74 3.17E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 SUPERFAMILY SSF56059 79 274 1.02E-56 T 22-04-2016 YPO3077 6d90c7ae595f19cff93b35e1309d4aa3 354 Gene3D G3DSA:3.30.470.20 119 353 2.2E-79 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 SUPERFAMILY SSF53790 213 456 1.03E-79 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Pfam PF13241 Putative NAD(P)-binding 6 115 5.9E-29 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 PIRSF PIRSF036426 1 465 3.5E-204 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 2.7E-20 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Gene3D G3DSA:1.10.8.210 150 209 5.1E-22 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 PANTHER PTHR21091 164 428 3.3E-83 T 22-04-2016 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Gene3D G3DSA:3.30.160.110 113 148 4.3E-19 T 22-04-2016 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Gene3D G3DSA:3.40.1010.10 215 330 3.5E-47 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 PANTHER PTHR21091:SF16 164 428 3.3E-83 T 22-04-2016 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Gene3D G3DSA:3.40.50.720 2 112 1.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3367 6b04c465cc68d4d432075dad76cae97c 472 SUPERFAMILY SSF51735 2 113 9.17E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 52.347 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 9.3E-8 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 1.1E-78 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 1.5E-92 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 3.7E-48 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 SUPERFAMILY SSF75615 114 211 1.96E-28 T 22-04-2016 YPO3367 6b04c465cc68d4d432075dad76cae97c 472 Gene3D G3DSA:3.30.950.10 331 462 4.8E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YPO2373 22f70820e7e280f1621dc4508ab88494 155 PANTHER PTHR35603 1 155 3.5E-56 T 22-04-2016 YPO2373 22f70820e7e280f1621dc4508ab88494 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 3.5E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YPO2373 22f70820e7e280f1621dc4508ab88494 155 PANTHER PTHR35603:SF1 1 155 3.5E-56 T 22-04-2016 YPO3564 b0ecdea66e6b0863f31fe19c42a16941 375 PANTHER PTHR12169 1 375 4.4E-211 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 YPO3564 b0ecdea66e6b0863f31fe19c42a16941 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 53.031 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 YPO3564 b0ecdea66e6b0863f31fe19c42a16941 375 SUPERFAMILY SSF52540 68 210 1.58E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3564 b0ecdea66e6b0863f31fe19c42a16941 375 PANTHER PTHR12169:SF11 1 375 4.4E-211 T 22-04-2016 YPO3564 b0ecdea66e6b0863f31fe19c42a16941 375 Pfam PF03969 AFG1-like ATPase 6 370 4.8E-148 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 YPO3564 b0ecdea66e6b0863f31fe19c42a16941 375 Gene3D G3DSA:3.40.50.300 17 182 5.7E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2986 493782b88072ae7631215c6358166baf 201 Pfam PF06042 Nucleotidyltransferase 23 199 5.2E-67 T 22-04-2016 IPR009267 Putative nucleotidyltransferase YPO2986 493782b88072ae7631215c6358166baf 201 PANTHER PTHR39166 1 81 8.8E-70 T 22-04-2016 YPO2986 493782b88072ae7631215c6358166baf 201 PANTHER PTHR39166 101 201 8.8E-70 T 22-04-2016 YPO0136 1aca0782781533b1021503070b6aedf5 239 Gene3D G3DSA:1.10.10.10 132 235 1.7E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0136 1aca0782781533b1021503070b6aedf5 239 PANTHER PTHR26402:SF292 5 235 4.1E-115 T 22-04-2016 YPO0136 1aca0782781533b1021503070b6aedf5 239 SMART SM00448 5 116 1.2E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0136 1aca0782781533b1021503070b6aedf5 239 SUPERFAMILY SSF52172 3 126 1.17E-41 T 22-04-2016 IPR011006 CheY-like superfamily YPO0136 1aca0782781533b1021503070b6aedf5 239 Gene3D G3DSA:3.40.50.2300 4 127 1.7E-42 T 22-04-2016 YPO0136 1aca0782781533b1021503070b6aedf5 239 SUPERFAMILY SSF46894 132 234 2.3E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO0136 1aca0782781533b1021503070b6aedf5 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0136 1aca0782781533b1021503070b6aedf5 239 PANTHER PTHR26402 5 235 4.1E-115 T 22-04-2016 YPO0136 1aca0782781533b1021503070b6aedf5 239 SMART SM00862 156 232 1.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0136 1aca0782781533b1021503070b6aedf5 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2894 695d8974489163404315b1553d6966d8 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site YPO2894 695d8974489163404315b1553d6966d8 107 SUPERFAMILY SSF89360 1 95 2.75E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO2894 695d8974489163404315b1553d6966d8 107 PANTHER PTHR10072 3 107 1.4E-50 T 22-04-2016 YPO2894 695d8974489163404315b1553d6966d8 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.5E-37 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 YPO2894 695d8974489163404315b1553d6966d8 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.6E-58 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 YPO2894 695d8974489163404315b1553d6966d8 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.3E-25 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO2894 695d8974489163404315b1553d6966d8 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 38.793 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 YPO2894 695d8974489163404315b1553d6966d8 107 Gene3D G3DSA:2.60.300.12 2 95 1.2E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO2610 fe8662f250eb1608aed2279da2305642 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2610 fe8662f250eb1608aed2279da2305642 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 4.3E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2610 fe8662f250eb1608aed2279da2305642 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 4.0E-26 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2610 fe8662f250eb1608aed2279da2305642 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 3.3E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2610 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946 240 571 0.0 T 22-04-2016 YPO2610 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946 615 859 0.0 T 22-04-2016 YPO2610 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 YPO2610 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.2E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.8E-78 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.90.740.10 223 424 2.8E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPO2610 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF47323 662 859 1.64E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO2610 fe8662f250eb1608aed2279da2305642 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.40.50.620 4 222 2.5E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2610 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.40.50.620 425 573 2.5E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2610 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:3.40.50.620 618 647 2.5E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2610 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF52374 416 668 8.56E-140 T 22-04-2016 YPO2610 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF52374 5 226 8.56E-140 T 22-04-2016 YPO2610 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946:SF7 240 571 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946:SF7 615 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 SUPERFAMILY SSF50677 226 415 5.55E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPO2610 fe8662f250eb1608aed2279da2305642 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.378 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YPO2610 fe8662f250eb1608aed2279da2305642 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 822 5.5E-16 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 YPO2610 fe8662f250eb1608aed2279da2305642 860 Gene3D G3DSA:1.10.730.10 648 795 1.5E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0055 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417:SF2 1 111 2.9E-149 T 22-04-2016 YPO0055 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417:SF2 190 425 2.9E-149 T 22-04-2016 YPO0055 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417:SF2 130 140 2.9E-149 T 22-04-2016 YPO0055 1a3f83fd512d03c88f0878a17cca4916 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 8.1E-67 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 YPO0055 1a3f83fd512d03c88f0878a17cca4916 425 SUPERFAMILY SSF53756 57 420 2.67E-16 T 22-04-2016 YPO0055 1a3f83fd512d03c88f0878a17cca4916 425 Pfam PF00534 Glycosyl transferases group 1 288 398 4.7E-10 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YPO0055 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417 1 111 2.9E-149 T 22-04-2016 YPO0055 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417 190 425 2.9E-149 T 22-04-2016 YPO0055 1a3f83fd512d03c88f0878a17cca4916 425 PANTHER PTHR23417 130 140 2.9E-149 T 22-04-2016 YPO2359 26fc107a0fedc0f5116b765514bcf27b 271 Pfam PF00005 ABC transporter 31 178 3.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2359 26fc107a0fedc0f5116b765514bcf27b 271 PANTHER PTHR24220:SF81 7 255 1.3E-128 T 22-04-2016 YPO2359 26fc107a0fedc0f5116b765514bcf27b 271 Gene3D G3DSA:3.40.50.300 2 252 1.5E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2359 26fc107a0fedc0f5116b765514bcf27b 271 SUPERFAMILY SSF52540 5 249 9.82E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2359 26fc107a0fedc0f5116b765514bcf27b 271 PANTHER PTHR24220 7 255 1.3E-128 T 22-04-2016 YPO2359 26fc107a0fedc0f5116b765514bcf27b 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2359 26fc107a0fedc0f5116b765514bcf27b 271 SMART SM00382 39 228 2.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3181 1f1db598d4494f6f2a39094d59d20aa0 138 Pfam PF01029 NusB family 7 131 4.5E-37 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPO3181 1f1db598d4494f6f2a39094d59d20aa0 138 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 24.26 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 YPO3181 1f1db598d4494f6f2a39094d59d20aa0 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 4.7E-47 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 YPO3181 1f1db598d4494f6f2a39094d59d20aa0 138 SUPERFAMILY SSF48013 3 135 2.49E-44 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPO3181 1f1db598d4494f6f2a39094d59d20aa0 138 Gene3D G3DSA:1.10.940.10 3 136 6.2E-48 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YPO3181 1f1db598d4494f6f2a39094d59d20aa0 138 PANTHER PTHR11078 1 138 1.9E-57 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 YPO0660 c4e505da6ab02c448d744fe5eb04929d 386 PANTHER PTHR30094:SF0 6 385 2.4E-171 T 22-04-2016 YPO0660 c4e505da6ab02c448d744fe5eb04929d 386 PANTHER PTHR30094 6 385 2.4E-171 T 22-04-2016 YPO0660 c4e505da6ab02c448d744fe5eb04929d 386 SUPERFAMILY SSF52440 174 279 1.06E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO0660 c4e505da6ab02c448d744fe5eb04929d 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 7.3E-164 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPO0660 c4e505da6ab02c448d744fe5eb04929d 386 SUPERFAMILY SSF56059 1 168 6.99E-93 T 22-04-2016 YPO0660 c4e505da6ab02c448d744fe5eb04929d 386 SUPERFAMILY SSF56059 266 383 6.99E-93 T 22-04-2016 YPO3518 1834649026af33c0268bc7cb1a058b3f 87 SUPERFAMILY SSF159871 4 87 1.7E-26 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO3518 1834649026af33c0268bc7cb1a058b3f 87 Gene3D G3DSA:3.30.1660.10 18 87 3.2E-28 T 22-04-2016 IPR025543 Dodecin-like YPO3518 1834649026af33c0268bc7cb1a058b3f 87 PANTHER PTHR34156 2 87 8.3E-57 T 22-04-2016 YPO3518 1834649026af33c0268bc7cb1a058b3f 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 6.4E-22 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO3518 1834649026af33c0268bc7cb1a058b3f 87 PANTHER PTHR34156:SF5 2 87 8.3E-57 T 22-04-2016 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 SUPERFAMILY SSF55904 623 763 1.12E-35 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 394 408 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 PANTHER PTHR11751:SF353 651 659 9.2E-146 T 22-04-2016 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 PANTHER PTHR11751:SF353 151 498 9.2E-146 T 22-04-2016 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 PANTHER PTHR11751:SF353 691 766 9.2E-146 T 22-04-2016 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 SUPERFAMILY SSF53383 150 620 1.45E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 PIRSF PIRSF009393 6 768 6.5E-279 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 Gene3D G3DSA:3.40.640.10 150 455 9.7E-98 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 Gene3D G3DSA:3.90.100.10 646 759 6.4E-29 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 Gene3D G3DSA:3.90.1150.10 460 645 5.9E-62 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 26 144 1.4E-20 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 628 757 1.1E-42 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 150 603 9.1E-159 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 PANTHER PTHR11751 651 659 9.2E-146 T 22-04-2016 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 PANTHER PTHR11751 151 498 9.2E-146 T 22-04-2016 YPO1201 c1fb75b879633152ad4c1f7af849b1a4 768 PANTHER PTHR11751 691 766 9.2E-146 T 22-04-2016 YPO2063 9e524d1239f0091d079daf27207fdd0f 320 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 306 6.6E-94 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPO2063 9e524d1239f0091d079daf27207fdd0f 320 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 3.4E-133 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 YPO2063 9e524d1239f0091d079daf27207fdd0f 320 PANTHER PTHR30606 10 320 1.6E-212 T 22-04-2016 YPO2063 9e524d1239f0091d079daf27207fdd0f 320 PANTHER PTHR30606:SF4 10 320 1.6E-212 T 22-04-2016 YPO2063 9e524d1239f0091d079daf27207fdd0f 320 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 53.918 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 YPO2063 9e524d1239f0091d079daf27207fdd0f 320 PIRSF PIRSF026649 11 315 2.6E-92 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 Gene3D G3DSA:3.30.70.20 104 139 6.9E-14 T 22-04-2016 YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 Gene3D G3DSA:3.30.70.20 3 71 4.5E-29 T 22-04-2016 YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 Gene3D G3DSA:3.30.70.20 140 184 4.5E-29 T 22-04-2016 YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 PANTHER PTHR11938 1 155 2.6E-101 T 22-04-2016 YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 Gene3D G3DSA:3.30.70.20 72 103 9.6E-12 T 22-04-2016 YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 9.7E-28 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 SUPERFAMILY SSF54862 1 199 1.15E-62 T 22-04-2016 YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 PANTHER PTHR11938:SF85 1 155 2.6E-101 T 22-04-2016 YPO2966 f6a178f48df086282e5dc9a49afe19ee 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 163 1.4E-77 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B YPO1082 1047eaca77205968cffd1900de9452a5 254 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 2.1E-94 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO1082 1047eaca77205968cffd1900de9452a5 254 PANTHER PTHR30231 1 254 2.4E-179 T 22-04-2016 YPO1082 1047eaca77205968cffd1900de9452a5 254 Gene3D G3DSA:3.30.420.10 3 185 2.5E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1082 1047eaca77205968cffd1900de9452a5 254 SMART SM00479 7 184 7.4E-52 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO1082 1047eaca77205968cffd1900de9452a5 254 SUPERFAMILY SSF53098 3 185 1.34E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1082 1047eaca77205968cffd1900de9452a5 254 PANTHER PTHR30231:SF0 1 254 2.4E-179 T 22-04-2016 YPO1082 1047eaca77205968cffd1900de9452a5 254 Pfam PF00929 Exonuclease 9 175 2.6E-40 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO1082 1047eaca77205968cffd1900de9452a5 254 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 2.0E-89 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO2258 1f273414b2dd7603866804058c491134 310 SUPERFAMILY SSF46689 182 232 5.55E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2258 1f273414b2dd7603866804058c491134 310 Gene3D G3DSA:2.60.120.280 13 173 2.9E-38 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO2258 1f273414b2dd7603866804058c491134 310 Gene3D G3DSA:1.10.10.60 236 285 1.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2258 1f273414b2dd7603866804058c491134 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 5.72E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO2258 1f273414b2dd7603866804058c491134 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 5.72E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO2258 1f273414b2dd7603866804058c491134 310 SUPERFAMILY SSF51215 12 171 2.62E-28 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO2258 1f273414b2dd7603866804058c491134 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPO2258 1f273414b2dd7603866804058c491134 310 PANTHER PTHR11019 1 290 2.2E-150 T 22-04-2016 YPO2258 1f273414b2dd7603866804058c491134 310 Pfam PF02311 AraC-like ligand binding domain 27 162 8.2E-22 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YPO2258 1f273414b2dd7603866804058c491134 310 PANTHER PTHR11019:SF123 1 290 2.2E-150 T 22-04-2016 YPO2258 1f273414b2dd7603866804058c491134 310 Pfam PF12833 Helix-turn-helix domain 205 284 7.2E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO2258 1f273414b2dd7603866804058c491134 310 SUPERFAMILY SSF46689 236 286 1.57E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2258 1f273414b2dd7603866804058c491134 310 Gene3D G3DSA:1.10.10.60 178 235 2.4E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2258 1f273414b2dd7603866804058c491134 310 SMART SM00342 199 282 5.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO2399 2a789af220becaf3ce4ba4b8ede4db7e 140 PANTHER PTHR12735 1 139 4.1E-70 T 22-04-2016 YPO2399 2a789af220becaf3ce4ba4b8ede4db7e 140 PANTHER PTHR12735:SF26 1 139 4.1E-70 T 22-04-2016 YPO2399 2a789af220becaf3ce4ba4b8ede4db7e 140 Pfam PF02657 Fe-S metabolism associated domain 12 132 2.4E-43 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 YPO2399 2a789af220becaf3ce4ba4b8ede4db7e 140 Gene3D G3DSA:3.90.1010.10 5 138 1.5E-51 T 22-04-2016 YPO2399 2a789af220becaf3ce4ba4b8ede4db7e 140 SUPERFAMILY SSF82649 4 135 1.26E-45 T 22-04-2016 YPO2399 2a789af220becaf3ce4ba4b8ede4db7e 140 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 43.434 T 22-04-2016 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 UniPathway: UPA00266 YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 Gene3D G3DSA:3.30.230.10 14 170 1.1E-53 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 PANTHER PTHR20861:SF2 1 299 1.7E-111 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 SUPERFAMILY SSF55060 174 288 7.91E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 13 282 32.183 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 Gene3D G3DSA:3.30.70.890 174 288 1.3E-42 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 PIRSF PIRSF010376 11 290 6.2E-85 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 Pfam PF08544 GHMP kinases C terminal 216 267 1.0E-5 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 Pfam PF00288 GHMP kinases N terminal domain 98 155 1.8E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 287 3.3E-108 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 SUPERFAMILY SSF54211 14 169 8.35E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO2014 108d7f133a3c1eb36ddfe3697551663c 299 PANTHER PTHR20861 1 299 1.7E-111 T 22-04-2016 YPO0937 655dcbcc50e88327b28b430fee53516a 140 SMART SM00732 4 104 5.6E-43 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YPO0937 655dcbcc50e88327b28b430fee53516a 140 Pfam PF03652 Holliday junction resolvase 5 137 3.5E-43 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YPO0937 655dcbcc50e88327b28b430fee53516a 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 26.091 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YPO0937 655dcbcc50e88327b28b430fee53516a 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 3.0E-59 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YPO0937 655dcbcc50e88327b28b430fee53516a 140 SUPERFAMILY SSF53098 4 137 2.58E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0937 655dcbcc50e88327b28b430fee53516a 140 Gene3D G3DSA:3.30.420.140 4 138 1.5E-48 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YPO0937 655dcbcc50e88327b28b430fee53516a 140 PANTHER PTHR33317 1 137 1.9E-46 T 22-04-2016 YPO0845 69875c6126037be90b574407b58ce5f9 192 Pfam PF01965 DJ-1/PfpI family 3 165 1.2E-31 T 22-04-2016 IPR002818 DJ-1/PfpI YPO0845 69875c6126037be90b574407b58ce5f9 192 PANTHER PTHR11019:SF88 1 190 1.8E-113 T 22-04-2016 YPO0845 69875c6126037be90b574407b58ce5f9 192 Gene3D G3DSA:3.40.50.880 1 172 1.5E-41 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO0845 69875c6126037be90b574407b58ce5f9 192 PANTHER PTHR11019 1 190 1.8E-113 T 22-04-2016 YPO0845 69875c6126037be90b574407b58ce5f9 192 SUPERFAMILY SSF52317 3 172 7.64E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO3059 9294d831c1f13b93454f6745bfa532b8 237 Gene3D G3DSA:3.30.470.20 94 219 2.8E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO3059 9294d831c1f13b93454f6745bfa532b8 237 Gene3D G3DSA:3.30.200.20 7 93 1.2E-32 T 22-04-2016 YPO3059 9294d831c1f13b93454f6745bfa532b8 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.6 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPO3059 9294d831c1f13b93454f6745bfa532b8 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 6.6E-79 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPO3059 9294d831c1f13b93454f6745bfa532b8 237 Pfam PF01259 SAICAR synthetase 6 231 5.1E-57 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPO3059 9294d831c1f13b93454f6745bfa532b8 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPO3059 9294d831c1f13b93454f6745bfa532b8 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YPO3059 9294d831c1f13b93454f6745bfa532b8 237 SUPERFAMILY SSF56104 2 232 4.58E-75 T 22-04-2016 YPO3059 9294d831c1f13b93454f6745bfa532b8 237 PANTHER PTHR11609:SF2 3 236 1.5E-120 T 22-04-2016 YPO3059 9294d831c1f13b93454f6745bfa532b8 237 PANTHER PTHR11609 3 236 1.5E-120 T 22-04-2016 YPO1379 9c6849038d944de22a72d80203744284 430 PIRSF PIRSF001529 1 430 5.6E-183 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 Gene3D G3DSA:3.30.930.10 105 427 7.0E-142 T 22-04-2016 YPO1379 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 8.3E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 7.8E-30 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 5.4E-180 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 PANTHER PTHR11778 1 429 4.0E-222 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 42.014 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 406 7.1E-36 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1379 9c6849038d944de22a72d80203744284 430 SUPERFAMILY SSF55681 116 425 3.14E-100 T 22-04-2016 YPO1379 9c6849038d944de22a72d80203744284 430 Gene3D G3DSA:1.10.287.40 1 104 9.0E-25 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 YPO1379 9c6849038d944de22a72d80203744284 430 PANTHER PTHR11778:SF0 1 429 4.0E-222 T 22-04-2016 YPO1379 9c6849038d944de22a72d80203744284 430 SUPERFAMILY SSF46589 1 112 7.32E-31 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 YPO1224 ca6618d5f9acc0ea151c5e93e3e44902 388 PANTHER PTHR22935 1 385 3.9E-83 T 22-04-2016 YPO1224 ca6618d5f9acc0ea151c5e93e3e44902 388 Gene3D G3DSA:3.40.710.10 37 380 3.9E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO1224 ca6618d5f9acc0ea151c5e93e3e44902 388 Pfam PF00144 Beta-lactamase 50 367 1.1E-61 T 22-04-2016 IPR001466 Beta-lactamase-related YPO1224 ca6618d5f9acc0ea151c5e93e3e44902 388 SUPERFAMILY SSF56601 43 367 1.23E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO1224 ca6618d5f9acc0ea151c5e93e3e44902 388 PANTHER PTHR22935:SF77 1 385 3.9E-83 T 22-04-2016 YPO1908 e30b24058fef793ba8075f9fad711716 267 Gene3D G3DSA:3.40.50.1820 8 126 3.0E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1908 e30b24058fef793ba8075f9fad711716 267 Gene3D G3DSA:3.40.50.1820 180 240 3.0E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1908 e30b24058fef793ba8075f9fad711716 267 PANTHER PTHR11487:SF3 2 258 7.4E-123 T 22-04-2016 YPO1908 e30b24058fef793ba8075f9fad711716 267 SUPERFAMILY SSF53474 9 246 1.41E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1908 e30b24058fef793ba8075f9fad711716 267 Pfam PF00975 Thioesterase domain 20 249 6.2E-67 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YPO1908 e30b24058fef793ba8075f9fad711716 267 PANTHER PTHR11487 2 258 7.4E-123 T 22-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 YPO4003 e076d1b72ef9031601a32234600dd6b5 535 Gene3D G3DSA:3.90.76.10 39 219 6.6E-48 T 22-04-2016 YPO4003 e076d1b72ef9031601a32234600dd6b5 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YPO4003 e076d1b72ef9031601a32234600dd6b5 535 SUPERFAMILY SSF53850 29 534 6.52E-161 T 22-04-2016 YPO4003 e076d1b72ef9031601a32234600dd6b5 535 PANTHER PTHR30290:SF14 1 534 7.6E-233 T 22-04-2016 YPO4003 e076d1b72ef9031601a32234600dd6b5 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 2.5E-106 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPO4003 e076d1b72ef9031601a32234600dd6b5 535 PIRSF PIRSF002741 23 535 1.7E-118 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPO4003 e076d1b72ef9031601a32234600dd6b5 535 Gene3D G3DSA:3.10.105.10 288 505 7.1E-70 T 22-04-2016 YPO4003 e076d1b72ef9031601a32234600dd6b5 535 PANTHER PTHR30290 1 534 7.6E-233 T 22-04-2016 YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 SMART SM00344 12 121 6.2E-54 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 SUPERFAMILY SSF54909 74 157 9.52E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 Gene3D G3DSA:1.10.10.10 13 64 3.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 Gene3D G3DSA:3.30.70.920 65 161 1.7E-32 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 PANTHER PTHR30154:SF0 4 162 1.3E-106 T 22-04-2016 YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 SUPERFAMILY SSF46785 12 70 5.69E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 4.6E-21 T 22-04-2016 YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 PANTHER PTHR30154 4 162 1.3E-106 T 22-04-2016 YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.7E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO1375 c70a663cd42a8467f0f1c6a41ce19981 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 SUPERFAMILY SSF101790 276 360 2.29E-24 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPO0907 7c70fcf45a941465f3077a07456c6f14 365 Gene3D G3DSA:2.40.30.110 278 361 1.1E-27 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 4.2E-19 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 PANTHER PTHR13847:SF5 5 353 9.6E-65 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 SUPERFAMILY SSF103025 3 277 7.38E-93 T 22-04-2016 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 PANTHER PTHR13847 5 353 9.6E-65 T 22-04-2016 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 Gene3D G3DSA:3.30.70.1400 54 137 2.2E-33 T 22-04-2016 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 358 1.6E-152 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 Gene3D G3DSA:3.30.1360.120 3 53 3.0E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 Gene3D G3DSA:3.30.1360.120 144 231 3.0E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 PIRSF PIRSF006487 1 363 1.1E-81 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPO0907 7c70fcf45a941465f3077a07456c6f14 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 5.1E-84 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal YPO0907 7c70fcf45a941465f3077a07456c6f14 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.75 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YPO3254 41d8782fb50ec969473b798e995aa09c 248 Gene3D G3DSA:3.40.50.300 1 239 8.6E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3254 41d8782fb50ec969473b798e995aa09c 248 SMART SM00382 28 215 4.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3254 41d8782fb50ec969473b798e995aa09c 248 PIRSF PIRSF039085 1 243 5.8E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPO3254 41d8782fb50ec969473b798e995aa09c 248 SUPERFAMILY SSF52540 3 236 1.03E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3254 41d8782fb50ec969473b798e995aa09c 248 PANTHER PTHR24220 5 247 1.8E-161 T 22-04-2016 YPO3254 41d8782fb50ec969473b798e995aa09c 248 Pfam PF00005 ABC transporter 19 167 3.2E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3254 41d8782fb50ec969473b798e995aa09c 248 PANTHER PTHR24220:SF550 5 247 1.8E-161 T 22-04-2016 YPO3254 41d8782fb50ec969473b798e995aa09c 248 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2842 ab17ed6af3ee2b60b7d23abf63a53133 421 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 221 409 4.5E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2842 ab17ed6af3ee2b60b7d23abf63a53133 421 SUPERFAMILY SSF161098 195 412 4.32E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2842 ab17ed6af3ee2b60b7d23abf63a53133 421 Gene3D G3DSA:1.10.3720.10 191 409 3.9E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2842 ab17ed6af3ee2b60b7d23abf63a53133 421 Gene3D G3DSA:1.10.3720.10 34 94 3.9E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2842 ab17ed6af3ee2b60b7d23abf63a53133 421 PANTHER PTHR30193:SF8 11 78 1.0E-168 T 22-04-2016 YPO2842 ab17ed6af3ee2b60b7d23abf63a53133 421 PANTHER PTHR30193:SF8 181 418 1.0E-168 T 22-04-2016 YPO2842 ab17ed6af3ee2b60b7d23abf63a53133 421 PANTHER PTHR30193 11 78 1.0E-168 T 22-04-2016 YPO2842 ab17ed6af3ee2b60b7d23abf63a53133 421 PANTHER PTHR30193 181 418 1.0E-168 T 22-04-2016 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 Gene3D G3DSA:3.20.20.370 82 267 1.1E-31 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 Gene3D G3DSA:3.20.20.370 13 38 1.1E-31 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 PANTHER PTHR10587 2 61 1.7E-13 T 22-04-2016 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 PANTHER PTHR10587 98 173 1.7E-13 T 22-04-2016 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 PANTHER PTHR10587:SF71 2 61 1.7E-13 T 22-04-2016 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 PANTHER PTHR10587:SF71 98 173 1.7E-13 T 22-04-2016 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 SUPERFAMILY SSF88713 15 41 4.45E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 SUPERFAMILY SSF88713 86 267 4.45E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 Pfam PF01522 Polysaccharide deacetylase 17 170 2.4E-13 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO2419 7e0a8fe2246f804e353edc4e7cacd849 301 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 64.602 T 22-04-2016 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 UniPathway: UPA00030|UniPathway: UPA00036 YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 132 3.4E-45 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 PANTHER PTHR30266:SF2 1 134 7.4E-58 T 22-04-2016 YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 SUPERFAMILY SSF81330 12 128 4.18E-35 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 3.6E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.6E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 3.6E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 135 29.7 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 PANTHER PTHR30266 1 134 7.4E-58 T 22-04-2016 YPO0238 bdf1bed5be211391ec3375e2a43e7e62 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 134 1.9E-54 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YPO3274 123bf3c63d361f8b6e0d81e525efa027 113 PANTHER PTHR35462 9 113 5.9E-70 T 22-04-2016 YPO3274 123bf3c63d361f8b6e0d81e525efa027 113 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 31 109 7.4E-7 T 22-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YPO3274 123bf3c63d361f8b6e0d81e525efa027 113 PANTHER PTHR35462:SF1 9 113 5.9E-70 T 22-04-2016 YPO3274 123bf3c63d361f8b6e0d81e525efa027 113 PIRSF PIRSF034456 8 113 1.1E-58 T 22-04-2016 IPR017028 Uncharacterised conserved protein UCP034456 YPO4028 bae53f3ae2cf9ef080371249c45891c5 120 Gene3D G3DSA:1.10.260.40 63 117 1.2E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO4028 bae53f3ae2cf9ef080371249c45891c5 120 SMART SM00530 63 118 1.6E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO4028 bae53f3ae2cf9ef080371249c45891c5 120 Pfam PF01381 Helix-turn-helix 65 114 3.6E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO4028 bae53f3ae2cf9ef080371249c45891c5 120 SUPERFAMILY SSF47413 63 115 8.16E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2645 3c71b6f56cef2cd3fc0b83175871712b 334 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 311 1.1E-52 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 YPO2645 3c71b6f56cef2cd3fc0b83175871712b 334 Gene3D G3DSA:3.40.190.100 114 261 3.4E-56 T 22-04-2016 YPO2645 3c71b6f56cef2cd3fc0b83175871712b 334 SUPERFAMILY SSF53850 24 324 9.77E-94 T 22-04-2016 YPO2645 3c71b6f56cef2cd3fc0b83175871712b 334 Gene3D G3DSA:3.40.190.10 23 112 1.2E-55 T 22-04-2016 YPO2645 3c71b6f56cef2cd3fc0b83175871712b 334 Gene3D G3DSA:3.40.190.10 262 328 1.2E-55 T 22-04-2016 YPO0733 818d403de3b177ff2356c067866dae29 307 PANTHER PTHR30244 1 307 3.4E-82 T 22-04-2016 YPO0733 818d403de3b177ff2356c067866dae29 307 SUPERFAMILY SSF64518 1 307 1.7E-43 T 22-04-2016 YPO0733 818d403de3b177ff2356c067866dae29 307 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 5.4E-8 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0733 818d403de3b177ff2356c067866dae29 307 PANTHER PTHR30244:SF5 1 307 3.4E-82 T 22-04-2016 YPO0733 818d403de3b177ff2356c067866dae29 307 Gene3D G3DSA:1.20.1330.10 212 259 1.6E-7 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0733 818d403de3b177ff2356c067866dae29 307 Gene3D G3DSA:1.20.1330.10 56 168 1.6E-7 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0733 818d403de3b177ff2356c067866dae29 307 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 178 2.0E-38 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 YPO2083 cd5d9040c065ae598cc9767cca6ce3fd 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.9E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein YPO2083 cd5d9040c065ae598cc9767cca6ce3fd 148 PIRSF PIRSF006173 1 145 6.5E-66 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 YPO2083 cd5d9040c065ae598cc9767cca6ce3fd 148 PANTHER PTHR37421 1 148 7.4E-84 T 22-04-2016 YPO2083 cd5d9040c065ae598cc9767cca6ce3fd 148 PANTHER PTHR37421:SF1 1 148 7.4E-84 T 22-04-2016 YPO2083 cd5d9040c065ae598cc9767cca6ce3fd 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 40.958 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 Pfam PF08351 Domain of unknown function (DUF1726) 64 147 2.2E-6 T 22-04-2016 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 PANTHER PTHR10925 1 621 0.0 T 22-04-2016 IPR032672 TmcA/NAT10/Kre33 GO:0008080 YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 PANTHER PTHR10925:SF6 1 621 0.0 T 22-04-2016 YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 16 667 50.568 T 22-04-2016 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 Gene3D G3DSA:3.40.630.30 366 429 1.7E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 Gene3D G3DSA:3.40.630.30 465 528 1.7E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 Pfam PF05127 Helicase 195 340 2.9E-38 T 22-04-2016 IPR007807 Helicase domain YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 SUPERFAMILY SSF55729 360 526 4.85E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 Pfam PF13718 GNAT acetyltransferase 2 380 488 1.1E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 Pfam PF13718 GNAT acetyltransferase 2 490 545 3.6E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 Gene3D G3DSA:3.40.50.300 157 288 5.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 SUPERFAMILY SSF52540 171 286 1.15E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3056 c0f9ed3a334639ebc93b98191c35729e 699 Pfam PF17176 tRNA-binding domain 549 669 1.4E-43 T 22-04-2016 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 YPO3216 5021f9b1a5a502013f1bc864476da3fd 185 SUPERFAMILY SSF53335 14 167 1.5E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3216 5021f9b1a5a502013f1bc864476da3fd 185 Pfam PF00398 Ribosomal RNA adenine dimethylase 34 152 1.3E-5 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPO3216 5021f9b1a5a502013f1bc864476da3fd 185 Gene3D G3DSA:3.40.50.150 30 170 1.1E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2445 61658c4b0522d65c1f618cee69f377a1 184 Pfam PF14002 YniB-like protein 15 179 4.3E-80 T 22-04-2016 IPR025229 YniB-like protein YPO2445 61658c4b0522d65c1f618cee69f377a1 184 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 181 1.0E-101 T 22-04-2016 YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 9.2E-29 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 PANTHER PTHR10996:SF118 1 323 4.0E-158 T 22-04-2016 YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 SUPERFAMILY SSF51735 100 288 6.09E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 67.673 T 22-04-2016 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.0E-61 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 SUPERFAMILY SSF52283 1 133 7.18E-30 T 22-04-2016 YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 PANTHER PTHR10996 1 323 4.0E-158 T 22-04-2016 YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 Gene3D G3DSA:3.40.50.720 2 113 7.1E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO4078 4d231e1cbd9e8c566c5254074afb5aa7 326 Gene3D G3DSA:3.40.50.720 114 287 1.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2960 d70f841b84014439e5514e5d57bd9398 349 Pfam PF00005 ABC transporter 19 163 2.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2960 d70f841b84014439e5514e5d57bd9398 349 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2960 d70f841b84014439e5514e5d57bd9398 349 SMART SM00382 28 213 2.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2960 d70f841b84014439e5514e5d57bd9398 349 PANTHER PTHR24220 261 287 5.4E-134 T 22-04-2016 YPO2960 d70f841b84014439e5514e5d57bd9398 349 PANTHER PTHR24220 5 242 5.4E-134 T 22-04-2016 YPO2960 d70f841b84014439e5514e5d57bd9398 349 SUPERFAMILY SSF50331 252 340 1.08E-6 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO2960 d70f841b84014439e5514e5d57bd9398 349 SUPERFAMILY SSF52540 4 242 3.77E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2960 d70f841b84014439e5514e5d57bd9398 349 PANTHER PTHR24220:SF282 261 287 5.4E-134 T 22-04-2016 YPO2960 d70f841b84014439e5514e5d57bd9398 349 PANTHER PTHR24220:SF282 5 242 5.4E-134 T 22-04-2016 YPO2960 d70f841b84014439e5514e5d57bd9398 349 Gene3D G3DSA:3.40.50.300 4 235 3.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 1.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SMART SM00304 180 232 1.7E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 1.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SUPERFAMILY SSF47384 232 289 2.16E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SUPERFAMILY SSF55874 292 442 6.68E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Gene3D G3DSA:1.10.287.130 228 288 1.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 PANTHER PTHR24423 130 444 4.3E-56 T 22-04-2016 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SMART SM00388 233 293 2.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 SMART SM00387 332 440 2.5E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Pfam PF00672 HAMP domain 162 225 1.3E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO0137 b5eeac0da456dd67d4ab4d5e85cd8e39 450 Gene3D G3DSA:3.30.565.10 293 442 3.9E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3937 41024d9a7d542452ceca517277745669 473 SUPERFAMILY SSF51905 4 229 8.35E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3937 41024d9a7d542452ceca517277745669 473 SUPERFAMILY SSF51905 281 343 8.35E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3937 41024d9a7d542452ceca517277745669 473 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 316 328 1.6E-14 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3937 41024d9a7d542452ceca517277745669 473 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 47 59 1.6E-14 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3937 41024d9a7d542452ceca517277745669 473 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 2 14 1.6E-14 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3937 41024d9a7d542452ceca517277745669 473 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 282 288 1.6E-14 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3937 41024d9a7d542452ceca517277745669 473 Gene3D G3DSA:3.50.50.60 5 239 2.3E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3937 41024d9a7d542452ceca517277745669 473 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 350 461 7.2E-12 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3937 41024d9a7d542452ceca517277745669 473 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 321 331 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YPO3937 41024d9a7d542452ceca517277745669 473 SUPERFAMILY SSF54373 195 288 1.96E-7 T 22-04-2016 YPO3937 41024d9a7d542452ceca517277745669 473 Pfam PF01266 FAD dependent oxidoreductase 4 292 6.1E-33 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPO3937 41024d9a7d542452ceca517277745669 473 PANTHER PTHR11985 2 469 2.8E-176 T 22-04-2016 YPO2526 c59c77e314d5d43c2209d2040ad09a9f 272 PANTHER PTHR10992 22 261 1.2E-70 T 22-04-2016 YPO2526 c59c77e314d5d43c2209d2040ad09a9f 272 Pfam PF12697 Alpha/beta hydrolase family 25 253 3.7E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO2526 c59c77e314d5d43c2209d2040ad09a9f 272 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 22 259 1.0E-83 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO2526 c59c77e314d5d43c2209d2040ad09a9f 272 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 18 260 35.383 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO2526 c59c77e314d5d43c2209d2040ad09a9f 272 Gene3D G3DSA:3.40.50.1820 20 261 2.5E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2526 c59c77e314d5d43c2209d2040ad09a9f 272 PANTHER PTHR10992:SF698 22 261 1.2E-70 T 22-04-2016 YPO2526 c59c77e314d5d43c2209d2040ad09a9f 272 SUPERFAMILY SSF53474 20 261 6.24E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1267 5ff73e7ef8e09e76b705e32d437ea78b 399 PANTHER PTHR23502 11 392 4.6E-219 T 22-04-2016 YPO1267 5ff73e7ef8e09e76b705e32d437ea78b 399 Pfam PF07690 Major Facilitator Superfamily 16 358 1.7E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1267 5ff73e7ef8e09e76b705e32d437ea78b 399 SUPERFAMILY SSF103473 5 394 1.15E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1267 5ff73e7ef8e09e76b705e32d437ea78b 399 Gene3D G3DSA:1.20.1250.20 12 195 9.3E-35 T 22-04-2016 YPO1267 5ff73e7ef8e09e76b705e32d437ea78b 399 Gene3D G3DSA:1.20.1250.20 201 392 1.2E-10 T 22-04-2016 YPO1267 5ff73e7ef8e09e76b705e32d437ea78b 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 390 1.6E-139 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 YPO1267 5ff73e7ef8e09e76b705e32d437ea78b 399 PANTHER PTHR23502:SF39 11 392 4.6E-219 T 22-04-2016 YPO3794 61346d1e2643c3da3d18fac8b0e88ee6 281 Gene3D G3DSA:1.10.3720.10 4 270 4.6E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3794 61346d1e2643c3da3d18fac8b0e88ee6 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 276 2.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3794 61346d1e2643c3da3d18fac8b0e88ee6 281 PANTHER PTHR32243:SF31 1 279 5.9E-145 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 YPO3794 61346d1e2643c3da3d18fac8b0e88ee6 281 PANTHER PTHR32243 1 279 5.9E-145 T 22-04-2016 YPO3794 61346d1e2643c3da3d18fac8b0e88ee6 281 SUPERFAMILY SSF161098 4 277 1.15E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1800 a8ef7b2bfefe031ddf92f41c4d040948 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPO1800 a8ef7b2bfefe031ddf92f41c4d040948 134 PANTHER PTHR30435:SF2 1 134 4.0E-69 T 22-04-2016 YPO1800 a8ef7b2bfefe031ddf92f41c4d040948 134 Pfam PF00460 Flagella basal body rod protein 7 37 2.3E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO1800 a8ef7b2bfefe031ddf92f41c4d040948 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 3.8E-11 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1800 a8ef7b2bfefe031ddf92f41c4d040948 134 PANTHER PTHR30435 1 134 4.0E-69 T 22-04-2016 YPO1800 a8ef7b2bfefe031ddf92f41c4d040948 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 4.6E-52 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 281 7.7E-118 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 PANTHER PTHR11649 5 303 9.1E-127 T 22-04-2016 YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 Hamap MF_00367 GTPase Era [era]. 7 298 35.886 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 Gene3D G3DSA:3.40.50.300 9 194 2.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 Pfam PF01926 50S ribosome-binding GTPase 12 126 2.3E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 Pfam PF07650 KH domain 210 286 2.4E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 PANTHER PTHR11649:SF3 5 303 9.1E-127 T 22-04-2016 YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 171 8.5E-41 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 Gene3D G3DSA:3.30.300.20 195 295 1.0E-40 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 SUPERFAMILY SSF54814 183 298 2.42E-42 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YPO2719 d46e1d42bae8741a68fa3277ad8acd3e 303 SUPERFAMILY SSF52540 12 206 2.39E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2424 3faa5484b37abb2499dfb8955197610a 184 SUPERFAMILY SSF52833 4 182 2.76E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2424 3faa5484b37abb2499dfb8955197610a 184 PANTHER PTHR11592:SF40 1 182 3.3E-91 T 22-04-2016 YPO2424 3faa5484b37abb2499dfb8955197610a 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 22-04-2016 IPR029759 Glutathione peroxidase active site YPO2424 3faa5484b37abb2499dfb8955197610a 184 Gene3D G3DSA:3.40.30.10 5 182 1.2E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2424 3faa5484b37abb2499dfb8955197610a 184 PANTHER PTHR11592 1 182 3.3E-91 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPO2424 3faa5484b37abb2499dfb8955197610a 184 Pfam PF00255 Glutathione peroxidase 5 111 1.8E-39 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPO2424 3faa5484b37abb2499dfb8955197610a 184 PIRSF PIRSF000303 1 184 1.6E-61 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPO2424 3faa5484b37abb2499dfb8955197610a 184 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.6E-18 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPO2424 3faa5484b37abb2499dfb8955197610a 184 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.6E-18 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPO2424 3faa5484b37abb2499dfb8955197610a 184 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.6E-18 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YPO2060 ba5e2ce9aae0b1454aced9afe94bd1b2 252 SUPERFAMILY SSF52540 3 218 1.05E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2060 ba5e2ce9aae0b1454aced9afe94bd1b2 252 SMART SM00382 29 199 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2060 ba5e2ce9aae0b1454aced9afe94bd1b2 252 Gene3D G3DSA:3.40.50.300 3 215 2.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2060 ba5e2ce9aae0b1454aced9afe94bd1b2 252 PANTHER PTHR24220:SF466 6 245 1.7E-156 T 22-04-2016 YPO2060 ba5e2ce9aae0b1454aced9afe94bd1b2 252 PANTHER PTHR24220 6 245 1.7E-156 T 22-04-2016 YPO2060 ba5e2ce9aae0b1454aced9afe94bd1b2 252 Pfam PF00005 ABC transporter 20 149 5.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 Gene3D G3DSA:3.90.180.10 1 172 5.9E-52 T 22-04-2016 IPR011032 GroES-like YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 4.4E-32 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 SUPERFAMILY SSF51735 141 305 2.45E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 5.0E-183 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 SUPERFAMILY SSF50129 1 173 4.26E-54 T 22-04-2016 IPR011032 GroES-like YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 SMART SM00829 12 338 1.2E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.556 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 4.8E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 PANTHER PTHR11695:SF285 13 341 3.0E-162 T 22-04-2016 YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 Gene3D G3DSA:3.40.50.720 173 287 1.3E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0060 3f5b8f2282362de4bd9290f9468c5515 341 PANTHER PTHR11695 13 341 3.0E-162 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPO1802 757f3b695096d6a4565490e30b65c023 428 PANTHER PTHR30435:SF1 306 428 2.2E-104 T 22-04-2016 YPO1802 757f3b695096d6a4565490e30b65c023 428 PANTHER PTHR30435:SF1 1 117 2.2E-104 T 22-04-2016 YPO1802 757f3b695096d6a4565490e30b65c023 428 SUPERFAMILY SSF117143 73 389 1.96E-77 T 22-04-2016 YPO1802 757f3b695096d6a4565490e30b65c023 428 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPO1802 757f3b695096d6a4565490e30b65c023 428 Pfam PF00460 Flagella basal body rod protein 4 33 3.9E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO1802 757f3b695096d6a4565490e30b65c023 428 PANTHER PTHR30435 306 428 2.2E-104 T 22-04-2016 YPO1802 757f3b695096d6a4565490e30b65c023 428 PANTHER PTHR30435 1 117 2.2E-104 T 22-04-2016 YPO1802 757f3b695096d6a4565490e30b65c023 428 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 410 1.3E-97 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO1802 757f3b695096d6a4565490e30b65c023 428 Pfam PF07559 Flagellar basal body protein FlaE 174 309 4.4E-18 T 22-04-2016 IPR011491 Flagellar hook protein FlgE YPO1802 757f3b695096d6a4565490e30b65c023 428 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 350 427 1.0E-22 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0619 415e3db1690142a5a3f81ac19dfcd479 349 PANTHER PTHR30367 11 347 3.3E-100 T 22-04-2016 YPO0619 415e3db1690142a5a3f81ac19dfcd479 349 Gene3D G3DSA:2.40.50.100 51 84 4.6E-16 T 22-04-2016 YPO0619 415e3db1690142a5a3f81ac19dfcd479 349 Gene3D G3DSA:2.40.50.100 211 244 4.6E-16 T 22-04-2016 YPO0619 415e3db1690142a5a3f81ac19dfcd479 349 Pfam PF13533 Biotin-lipoyl like 51 99 6.8E-14 T 22-04-2016 YPO0619 415e3db1690142a5a3f81ac19dfcd479 349 Pfam PF13437 HlyD family secretion protein 214 329 5.4E-10 T 22-04-2016 YPO0619 415e3db1690142a5a3f81ac19dfcd479 349 SUPERFAMILY SSF111369 50 111 4.97E-10 T 22-04-2016 YPO0619 415e3db1690142a5a3f81ac19dfcd479 349 SUPERFAMILY SSF111369 125 158 1.05E-8 T 22-04-2016 YPO0619 415e3db1690142a5a3f81ac19dfcd479 349 SUPERFAMILY SSF111369 190 263 1.05E-8 T 22-04-2016 YPO0619 415e3db1690142a5a3f81ac19dfcd479 349 PANTHER PTHR30367:SF1 11 347 3.3E-100 T 22-04-2016 IPR030196 Multidrug resistance protein MdtN GO:0006855 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 455 7.1E-161 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 SUPERFAMILY SSF50156 382 456 3.55E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.40.10.10 158 270 3.5E-43 T 22-04-2016 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 PRINTS PR00834 HtrA/DegQ protease family signature 104 116 5.8E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 PANTHER PTHR22939 1 457 4.3E-207 T 22-04-2016 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 SUPERFAMILY SSF50156 227 352 8.54E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.30.42.10 271 366 3.3E-30 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 Pfam PF13365 Trypsin-like peptidase domain 94 230 1.7E-33 T 22-04-2016 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.30.42.10 389 454 5.4E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 Pfam PF13180 PDZ domain 280 360 9.7E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 PANTHER PTHR22939:SF101 1 457 4.3E-207 T 22-04-2016 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 375 445 1.4E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 SMART SM00228 269 351 1.3E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 SMART SM00228 352 449 5.1E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 Gene3D G3DSA:2.40.10.10 39 157 1.3E-35 T 22-04-2016 YPO3566 1dff187c67b2d682cbd0f566448218ee 457 SUPERFAMILY SSF50494 39 261 1.6E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan YPO3430 ca1f41166baf7da78d53d76208115ee7 206 Gene3D G3DSA:3.40.50.300 2 197 2.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3430 ca1f41166baf7da78d53d76208115ee7 206 SUPERFAMILY SSF52540 1 190 3.58E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3430 ca1f41166baf7da78d53d76208115ee7 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.735 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 YPO3430 ca1f41166baf7da78d53d76208115ee7 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 1.9E-63 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 YPO3430 ca1f41166baf7da78d53d76208115ee7 206 Pfam PF01121 Dephospho-CoA kinase 3 177 2.2E-73 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 YPO3430 ca1f41166baf7da78d53d76208115ee7 206 PANTHER PTHR10695 1 195 4.9E-82 T 22-04-2016 YPO1926 36d6e8bc06628e75e5c039b635b85562 440 SUPERFAMILY SSF100950 4 232 1.53E-32 T 22-04-2016 YPO1926 36d6e8bc06628e75e5c039b635b85562 440 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 283 434 6.8E-60 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YPO1926 36d6e8bc06628e75e5c039b635b85562 440 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 6 195 4.8E-14 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 YPO1926 36d6e8bc06628e75e5c039b635b85562 440 Gene3D G3DSA:3.40.810.20 207 436 1.1E-45 T 22-04-2016 YPO1926 36d6e8bc06628e75e5c039b635b85562 440 Gene3D G3DSA:3.40.1080.10 7 194 9.9E-53 T 22-04-2016 YPO1926 36d6e8bc06628e75e5c039b635b85562 440 SUPERFAMILY SSF100950 209 438 1.0E-59 T 22-04-2016 YPO1926 36d6e8bc06628e75e5c039b635b85562 440 PANTHER PTHR21432 1 440 2.0E-187 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 YPO2455 6913b5e118003688f86816e338c6eae3 232 SUPERFAMILY SSF103481 62 166 2.35E-15 T 22-04-2016 YPO2455 6913b5e118003688f86816e338c6eae3 232 PANTHER PTHR32322:SF9 10 226 1.4E-50 T 22-04-2016 YPO2455 6913b5e118003688f86816e338c6eae3 232 Pfam PF00892 EamA-like transporter family 27 163 2.2E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO2455 6913b5e118003688f86816e338c6eae3 232 PANTHER PTHR32322 10 226 1.4E-50 T 22-04-2016 YPO1261 4af70e20e70c4af3a6a512a5208cafaf 75 Gene3D G3DSA:1.10.3390.10 1 75 6.9E-38 T 22-04-2016 IPR023202 YejL-like domain YPO1261 4af70e20e70c4af3a6a512a5208cafaf 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 3.8E-24 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YPO1261 4af70e20e70c4af3a6a512a5208cafaf 75 PIRSF PIRSF006188 1 72 3.0E-35 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YPO1261 4af70e20e70c4af3a6a512a5208cafaf 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-27 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YPO1261 4af70e20e70c4af3a6a512a5208cafaf 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.627 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YPO1261 4af70e20e70c4af3a6a512a5208cafaf 75 SUPERFAMILY SSF158651 1 75 2.09E-31 T 22-04-2016 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 SMART SM00382 36 179 9.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 Pfam PF00158 Sigma-54 interaction domain 18 183 8.5E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 SUPERFAMILY SSF46689 228 330 5.38E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 PANTHER PTHR32071 12 339 1.3E-180 T 22-04-2016 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 314 334 1.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 314 1.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 Pfam PF02954 Bacterial regulatory protein, Fis family 296 329 3.7E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 102 117 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 40 53 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 Gene3D G3DSA:3.40.50.300 14 188 4.8E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 PANTHER PTHR32071:SF21 12 339 1.3E-180 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 Gene3D G3DSA:1.10.10.60 296 328 2.3E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 SUPERFAMILY SSF52540 26 254 1.56E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 Gene3D G3DSA:1.10.8.60 189 262 7.3E-21 T 22-04-2016 YPO0712 f85ca7c750d5413b93de79caa77adfa5 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 228 237 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPO3398 97c91763f508d5306dfac3a5450f80b2 321 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 22 279 1.6E-111 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 Gene3D G3DSA:3.40.50.620 188 236 1.5E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3398 97c91763f508d5306dfac3a5450f80b2 321 Gene3D G3DSA:3.40.50.620 22 87 1.5E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3398 97c91763f508d5306dfac3a5450f80b2 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 50 1.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 54 67 1.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 25 37 1.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 196 1.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 210 1.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 Gene3D G3DSA:3.90.800.10 88 186 1.9E-15 T 22-04-2016 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 22 306 40.957 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 SUPERFAMILY SSF52374 22 297 6.76E-85 T 22-04-2016 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 PANTHER PTHR11451 14 253 2.1E-126 T 22-04-2016 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 PANTHER PTHR11451:SF35 14 253 2.1E-126 T 22-04-2016 YPO3398 97c91763f508d5306dfac3a5450f80b2 321 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 25 249 4.8E-44 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 YPO3526 8d880e024717e71d7e87096244d110b2 443 SUPERFAMILY SSF56176 344 429 2.13E-22 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPO3526 8d880e024717e71d7e87096244d110b2 443 Gene3D G3DSA:3.30.465.10 341 425 1.6E-27 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPO3526 8d880e024717e71d7e87096244d110b2 443 Pfam PF00571 CBS domain 287 333 0.0028 T 22-04-2016 IPR000644 CBS domain YPO3526 8d880e024717e71d7e87096244d110b2 443 SMART SM01091 346 426 1.2E-27 T 22-04-2016 IPR005170 Transporter-associated domain YPO3526 8d880e024717e71d7e87096244d110b2 443 SUPERFAMILY SSF54631 200 335 5.97E-21 T 22-04-2016 YPO3526 8d880e024717e71d7e87096244d110b2 443 SMART SM00116 285 333 10.0 T 22-04-2016 IPR000644 CBS domain YPO3526 8d880e024717e71d7e87096244d110b2 443 SMART SM00116 221 270 2.1 T 22-04-2016 IPR000644 CBS domain YPO3526 8d880e024717e71d7e87096244d110b2 443 Gene3D G3DSA:3.10.580.10 198 337 1.9E-13 T 22-04-2016 YPO3526 8d880e024717e71d7e87096244d110b2 443 PANTHER PTHR22777:SF16 1 440 0.0 T 22-04-2016 YPO3526 8d880e024717e71d7e87096244d110b2 443 Pfam PF01595 Domain of unknown function DUF21 6 197 3.7E-38 T 22-04-2016 IPR002550 Domain of unknown function DUF21 YPO3526 8d880e024717e71d7e87096244d110b2 443 PANTHER PTHR22777 1 440 0.0 T 22-04-2016 YPO3526 8d880e024717e71d7e87096244d110b2 443 Pfam PF03471 Transporter associated domain 347 425 1.9E-20 T 22-04-2016 IPR005170 Transporter-associated domain YPO1199 d46798700a74102c12a4e39407998a8e 278 Gene3D G3DSA:1.10.3720.10 33 267 9.4E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1199 d46798700a74102c12a4e39407998a8e 278 SUPERFAMILY SSF161098 69 259 6.67E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1199 d46798700a74102c12a4e39407998a8e 278 PANTHER PTHR30177 1 278 1.4E-192 T 22-04-2016 YPO1199 d46798700a74102c12a4e39407998a8e 278 PANTHER PTHR30177:SF11 1 278 1.4E-192 T 22-04-2016 YPO1199 d46798700a74102c12a4e39407998a8e 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 265 5.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2543 21febf70dbd4d0178cb024a55c80ac63 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 477 1.2E-132 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YPO2543 21febf70dbd4d0178cb024a55c80ac63 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 477 17.725 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YPO2543 21febf70dbd4d0178cb024a55c80ac63 487 PANTHER PTHR22773 1 487 1.3E-201 T 22-04-2016 YPO2543 21febf70dbd4d0178cb024a55c80ac63 487 PANTHER PTHR22773:SF41 1 487 1.3E-201 T 22-04-2016 YPO2543 21febf70dbd4d0178cb024a55c80ac63 487 Pfam PF00361 Proton-conducting membrane transporter 122 422 9.2E-81 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YPO2358 5434025266aa6f9bb2a6796872f44c09 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 3.5E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO2358 5434025266aa6f9bb2a6796872f44c09 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 2.4E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO2358 5434025266aa6f9bb2a6796872f44c09 330 Gene3D G3DSA:3.40.50.300 2 262 8.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2358 5434025266aa6f9bb2a6796872f44c09 330 SUPERFAMILY SSF52540 3 266 1.96E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2358 5434025266aa6f9bb2a6796872f44c09 330 SMART SM00382 32 235 1.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2358 5434025266aa6f9bb2a6796872f44c09 330 PANTHER PTHR24220 5 329 7.6E-223 T 22-04-2016 YPO2358 5434025266aa6f9bb2a6796872f44c09 330 PANTHER PTHR24220:SF514 5 329 7.6E-223 T 22-04-2016 YPO2358 5434025266aa6f9bb2a6796872f44c09 330 Pfam PF00005 ABC transporter 24 187 1.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0670 02071d5f77d07bd6609a4cccf10e0e1c 194 PANTHER PTHR10204:SF36 1 190 1.9E-135 T 22-04-2016 YPO0670 02071d5f77d07bd6609a4cccf10e0e1c 194 PANTHER PTHR10204 1 190 1.9E-135 T 22-04-2016 YPO0670 02071d5f77d07bd6609a4cccf10e0e1c 194 SUPERFAMILY SSF52218 1 191 1.06E-41 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO0670 02071d5f77d07bd6609a4cccf10e0e1c 194 Gene3D G3DSA:3.40.50.360 1 190 1.6E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO0670 02071d5f77d07bd6609a4cccf10e0e1c 194 Pfam PF02525 Flavodoxin-like fold 3 188 3.3E-36 T 22-04-2016 IPR003680 Flavodoxin-like fold YPO2587 7ad619d92f9156192dff09a89ebdeb86 271 PIRSF PIRSF036628 1 269 1.6E-112 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 YPO2587 7ad619d92f9156192dff09a89ebdeb86 271 PANTHER PTHR39193 1 271 1.3E-142 T 22-04-2016 YPO2587 7ad619d92f9156192dff09a89ebdeb86 271 Gene3D G3DSA:2.60.120.10 122 267 4.3E-68 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO2587 7ad619d92f9156192dff09a89ebdeb86 271 SUPERFAMILY SSF51182 4 253 1.29E-71 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO2587 7ad619d92f9156192dff09a89ebdeb86 271 PANTHER PTHR39193:SF1 1 271 1.3E-142 T 22-04-2016 YPO2587 7ad619d92f9156192dff09a89ebdeb86 271 Pfam PF04962 KduI/IolB family 7 264 6.9E-110 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YPO2587 7ad619d92f9156192dff09a89ebdeb86 271 Gene3D G3DSA:2.60.120.10 16 121 7.1E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO2587 7ad619d92f9156192dff09a89ebdeb86 271 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 264 2.4E-96 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 Pfam PF00206 Lyase 6 301 1.4E-95 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PANTHER PTHR11444 3 456 5.3E-240 T 22-04-2016 IPR000362 Fumarate lyase family YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 Gene3D G3DSA:1.20.200.10 108 374 8.4E-104 T 22-04-2016 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 9.0E-210 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 Gene3D G3DSA:1.10.275.10 1 107 1.4E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 Gene3D G3DSA:1.10.40.30 375 432 3.6E-29 T 22-04-2016 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.2E-67 T 22-04-2016 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.2E-67 T 22-04-2016 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.2E-67 T 22-04-2016 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.2E-67 T 22-04-2016 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.2E-67 T 22-04-2016 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.2E-67 T 22-04-2016 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 SUPERFAMILY SSF48557 3 456 3.46E-141 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 PANTHER PTHR11444:SF3 3 456 5.3E-240 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.2E-22 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3924 991a56e79f1f7cefa55629bb46cbc642 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.021 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO0122 5fddd7b6421c999cfea110f95c87104c 109 PANTHER PTHR12231 23 98 1.1E-14 T 22-04-2016 YPO0122 5fddd7b6421c999cfea110f95c87104c 109 Gene3D G3DSA:3.40.250.10 2 99 2.0E-27 T 22-04-2016 IPR001763 Rhodanese-like domain YPO0122 5fddd7b6421c999cfea110f95c87104c 109 SUPERFAMILY SSF52821 3 101 1.7E-26 T 22-04-2016 IPR001763 Rhodanese-like domain YPO0122 5fddd7b6421c999cfea110f95c87104c 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.586 T 22-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 YPO0122 5fddd7b6421c999cfea110f95c87104c 109 SMART SM00450 7 102 9.2E-21 T 22-04-2016 IPR001763 Rhodanese-like domain YPO0122 5fddd7b6421c999cfea110f95c87104c 109 Pfam PF00581 Rhodanese-like domain 15 98 1.3E-14 T 22-04-2016 IPR001763 Rhodanese-like domain YPO1558 8a05d4a2790abc515c0ee0896da42b38 476 SUPERFAMILY SSF53098 8 474 2.28E-134 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1558 8a05d4a2790abc515c0ee0896da42b38 476 Pfam PF00929 Exonuclease 12 191 2.0E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO1558 8a05d4a2790abc515c0ee0896da42b38 476 Pfam PF08411 Exonuclease C-terminal 211 472 3.4E-109 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 YPO1558 8a05d4a2790abc515c0ee0896da42b38 476 PANTHER PTHR11046:SF2 1 476 0.0 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 YPO1558 8a05d4a2790abc515c0ee0896da42b38 476 Gene3D G3DSA:3.30.420.10 3 199 2.0E-83 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1558 8a05d4a2790abc515c0ee0896da42b38 476 PANTHER PTHR11046 1 476 0.0 T 22-04-2016 YPO1558 8a05d4a2790abc515c0ee0896da42b38 476 PIRSF PIRSF000977 2 476 7.2E-206 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 YPO3068 d7e5a1d2e190f9ce49c933473ed3d50a 354 PANTHER PTHR21716:SF19 7 353 2.4E-164 T 22-04-2016 YPO3068 d7e5a1d2e190f9ce49c933473ed3d50a 354 PANTHER PTHR21716 7 353 2.4E-164 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPO3068 d7e5a1d2e190f9ce49c933473ed3d50a 354 Pfam PF01594 Domain of unknown function DUF20 19 345 1.4E-81 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPO0013 53717fbdb4231a4e585e096af6c88aac 213 PANTHER PTHR19136:SF81 18 211 1.2E-59 T 22-04-2016 YPO0013 53717fbdb4231a4e585e096af6c88aac 213 PANTHER PTHR19136 18 211 1.2E-59 T 22-04-2016 YPO0013 53717fbdb4231a4e585e096af6c88aac 213 SUPERFAMILY SSF53448 21 202 7.19E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO0013 53717fbdb4231a4e585e096af6c88aac 213 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 21 206 29.815 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 YPO0013 53717fbdb4231a4e585e096af6c88aac 213 Pfam PF12804 MobA-like NTP transferase domain 25 174 1.1E-34 T 22-04-2016 IPR025877 MobA-like NTP transferase YPO0013 53717fbdb4231a4e585e096af6c88aac 213 Gene3D G3DSA:3.90.550.10 19 208 3.1E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO0013 53717fbdb4231a4e585e096af6c88aac 213 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 23 203 7.1E-69 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 SMART SM00448 1 111 1.0E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 PANTHER PTHR26402 1 227 9.2E-80 T 22-04-2016 YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 PANTHER PTHR26402:SF292 1 227 9.2E-80 T 22-04-2016 YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 Pfam PF00072 Response regulator receiver domain 3 111 4.7E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 SMART SM00862 150 226 8.6E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 SUPERFAMILY SSF46894 126 226 3.4E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 Gene3D G3DSA:1.10.10.10 130 226 2.5E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 SUPERFAMILY SSF52172 1 123 3.56E-36 T 22-04-2016 IPR011006 CheY-like superfamily YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 Gene3D G3DSA:3.40.50.2300 1 121 2.2E-34 T 22-04-2016 YPO2998 1d11ec06d6811a37e6ab5659e0aebc7a 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 9.0E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2834 98554625f76934e45e01a0a6f7fb5df0 570 Gene3D G3DSA:1.10.3720.10 305 566 1.4E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2834 98554625f76934e45e01a0a6f7fb5df0 570 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 302 562 5.5E-74 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 YPO2834 98554625f76934e45e01a0a6f7fb5df0 570 PANTHER PTHR30425 211 568 2.2E-200 T 22-04-2016 YPO2834 98554625f76934e45e01a0a6f7fb5df0 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 338 566 3.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2834 98554625f76934e45e01a0a6f7fb5df0 570 SUPERFAMILY SSF161098 285 553 1.7E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2834 98554625f76934e45e01a0a6f7fb5df0 570 PANTHER PTHR30425:SF7 211 568 2.2E-200 T 22-04-2016 YPO4056 f9e7dbbc3ecb1d9de81d4a0af8218541 224 SUPERFAMILY SSF81342 4 206 3.14E-55 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPO4056 f9e7dbbc3ecb1d9de81d4a0af8218541 224 PANTHER PTHR30074 1 222 2.2E-104 T 22-04-2016 YPO4056 f9e7dbbc3ecb1d9de81d4a0af8218541 224 Pfam PF01292 Prokaryotic cytochrome b561 9 184 3.1E-23 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YPO4056 f9e7dbbc3ecb1d9de81d4a0af8218541 224 Gene3D G3DSA:1.20.950.20 1 210 3.9E-75 T 22-04-2016 YPO4056 f9e7dbbc3ecb1d9de81d4a0af8218541 224 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 4.6E-66 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 YPO1810 bd71cef3334f4d391b4c5f243975e23b 325 PANTHER PTHR34294:SF4 1 325 1.0E-227 T 22-04-2016 YPO1810 bd71cef3334f4d391b4c5f243975e23b 325 Pfam PF04198 Putative sugar-binding domain 70 319 1.0E-67 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YPO1810 bd71cef3334f4d391b4c5f243975e23b 325 SUPERFAMILY SSF100950 72 319 2.33E-66 T 22-04-2016 YPO1810 bd71cef3334f4d391b4c5f243975e23b 325 PANTHER PTHR34294 1 325 1.0E-227 T 22-04-2016 YPO1810 bd71cef3334f4d391b4c5f243975e23b 325 Gene3D G3DSA:1.10.10.10 29 63 5.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1810 bd71cef3334f4d391b4c5f243975e23b 325 Gene3D G3DSA:3.40.50.1360 64 319 1.5E-74 T 22-04-2016 YPO1810 bd71cef3334f4d391b4c5f243975e23b 325 SUPERFAMILY SSF88659 24 55 1.5E-5 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO1390 44de891b25bead524d19acff99cc30f2 428 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO1390 44de891b25bead524d19acff99cc30f2 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 424 1.9E-141 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO1390 44de891b25bead524d19acff99cc30f2 428 PIRSF PIRSF000505 2 428 1.8E-153 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO1390 44de891b25bead524d19acff99cc30f2 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 420 1.5E-152 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPO1390 44de891b25bead524d19acff99cc30f2 428 Gene3D G3DSA:3.65.10.10 239 423 1.0E-73 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPO1390 44de891b25bead524d19acff99cc30f2 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO1390 44de891b25bead524d19acff99cc30f2 428 Gene3D G3DSA:3.65.10.10 23 238 1.4E-67 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPO1390 44de891b25bead524d19acff99cc30f2 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 35.436 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO1390 44de891b25bead524d19acff99cc30f2 428 SUPERFAMILY SSF55205 4 424 7.29E-145 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YPO1390 44de891b25bead524d19acff99cc30f2 428 PANTHER PTHR21090 3 425 1.8E-218 T 22-04-2016 YPO0819 1e4a882dc734941665e657ee718f0417 251 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 44 7.5E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO0819 1e4a882dc734941665e657ee718f0417 251 Gene3D G3DSA:3.40.1050.10 43 250 5.8E-53 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO0819 1e4a882dc734941665e657ee718f0417 251 SMART SM00947 91 251 7.5E-43 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO0819 1e4a882dc734941665e657ee718f0417 251 PANTHER PTHR11002 13 250 3.0E-176 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO0819 1e4a882dc734941665e657ee718f0417 251 SUPERFAMILY SSF53056 42 250 2.09E-53 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO0819 1e4a882dc734941665e657ee718f0417 251 Pfam PF00484 Carbonic anhydrase 98 247 1.5E-35 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YPO0819 1e4a882dc734941665e657ee718f0417 251 PANTHER PTHR11002:SF22 13 250 3.0E-176 T 22-04-2016 YPO2378 43004045a45df006aa70e426bd3b8adc 199 PANTHER PTHR30055:SF20 1 197 6.5E-95 T 22-04-2016 YPO2378 43004045a45df006aa70e426bd3b8adc 199 PANTHER PTHR30055 1 197 6.5E-95 T 22-04-2016 YPO2378 43004045a45df006aa70e426bd3b8adc 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 3.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO2378 43004045a45df006aa70e426bd3b8adc 199 SUPERFAMILY SSF48498 85 196 3.86E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO2378 43004045a45df006aa70e426bd3b8adc 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 88 186 6.2E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO2378 43004045a45df006aa70e426bd3b8adc 199 SUPERFAMILY SSF46689 2 77 6.67E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2378 43004045a45df006aa70e426bd3b8adc 199 Gene3D G3DSA:1.10.357.10 10 185 7.5E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPO1120 c782f3af55a73339f2c85351710e716e 133 PANTHER PTHR31793:SF9 1 133 5.9E-53 T 22-04-2016 YPO1120 c782f3af55a73339f2c85351710e716e 133 PANTHER PTHR31793 1 133 5.9E-53 T 22-04-2016 YPO1120 c782f3af55a73339f2c85351710e716e 133 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 4.9E-50 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- YPO1120 c782f3af55a73339f2c85351710e716e 133 PIRSF PIRSF003230 1 133 1.5E-46 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YPO1120 c782f3af55a73339f2c85351710e716e 133 Pfam PF03061 Thioesterase superfamily 20 103 1.2E-15 T 22-04-2016 IPR006683 Thioesterase domain YPO1120 c782f3af55a73339f2c85351710e716e 133 Gene3D G3DSA:3.10.129.10 3 131 6.9E-47 T 22-04-2016 IPR029069 HotDog domain YPO1120 c782f3af55a73339f2c85351710e716e 133 SUPERFAMILY SSF54637 4 132 5.9E-38 T 22-04-2016 IPR029069 HotDog domain YPO1120 c782f3af55a73339f2c85351710e716e 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 6.6E-42 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YPO1414 8c7ab6ec3574604a67258887e4030860 871 Gene3D G3DSA:1.25.50.10 546 870 9.7E-128 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPO1414 8c7ab6ec3574604a67258887e4030860 871 PANTHER PTHR11533 609 869 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 YPO1414 8c7ab6ec3574604a67258887e4030860 871 PANTHER PTHR11533 10 586 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 YPO1414 8c7ab6ec3574604a67258887e4030860 871 Gene3D G3DSA:1.10.390.10 308 451 1.1E-33 T 22-04-2016 YPO1414 8c7ab6ec3574604a67258887e4030860 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPO1414 8c7ab6ec3574604a67258887e4030860 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPO1414 8c7ab6ec3574604a67258887e4030860 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPO1414 8c7ab6ec3574604a67258887e4030860 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPO1414 8c7ab6ec3574604a67258887e4030860 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 2.4E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPO1414 8c7ab6ec3574604a67258887e4030860 871 SUPERFAMILY SSF63737 1 193 2.88E-50 T 22-04-2016 YPO1414 8c7ab6ec3574604a67258887e4030860 871 Pfam PF01433 Peptidase family M1 23 384 1.0E-71 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YPO1414 8c7ab6ec3574604a67258887e4030860 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 YPO1414 8c7ab6ec3574604a67258887e4030860 871 SUPERFAMILY SSF55486 204 450 2.2E-74 T 22-04-2016 YPO1414 8c7ab6ec3574604a67258887e4030860 871 PANTHER PTHR11533:SF152 609 869 0.0 T 22-04-2016 YPO1414 8c7ab6ec3574604a67258887e4030860 871 PANTHER PTHR11533:SF152 10 586 0.0 T 22-04-2016 YPO1414 8c7ab6ec3574604a67258887e4030860 871 Pfam PF11940 Domain of unknown function (DUF3458) 459 827 1.2E-141 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPO3973 c7ec83ed5c5ccd5e2624bd4431818a09 445 PANTHER PTHR36921 2 445 1.1E-160 T 22-04-2016 YPO3973 c7ec83ed5c5ccd5e2624bd4431818a09 445 SUPERFAMILY SSF51120 227 437 1.18E-34 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO3973 c7ec83ed5c5ccd5e2624bd4431818a09 445 PIRSF PIRSF001205 16 439 1.1E-121 T 22-04-2016 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 YPO3973 c7ec83ed5c5ccd5e2624bd4431818a09 445 SUPERFAMILY SSF55486 31 223 1.04E-52 T 22-04-2016 YPO3973 c7ec83ed5c5ccd5e2624bd4431818a09 445 Gene3D G3DSA:3.40.390.10 36 226 7.1E-41 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YPO3973 c7ec83ed5c5ccd5e2624bd4431818a09 445 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 358 380 0.0015 T 22-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass YPO3973 c7ec83ed5c5ccd5e2624bd4431818a09 445 SMART SM00235 46 225 1.7E-16 T 22-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 YPO3973 c7ec83ed5c5ccd5e2624bd4431818a09 445 Gene3D G3DSA:2.150.10.10 233 381 2.6E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO3973 c7ec83ed5c5ccd5e2624bd4431818a09 445 Pfam PF08548 Peptidase M10 serralysin C terminal 225 438 6.4E-86 T 22-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 SMART SM00345 17 75 5.5E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 Pfam PF07729 FCD domain 85 204 3.4E-21 T 22-04-2016 IPR011711 GntR, C-terminal YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 Gene3D G3DSA:1.20.120.530 78 215 4.7E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 SMART SM00895 85 205 2.5E-12 T 22-04-2016 IPR011711 GntR, C-terminal YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 SUPERFAMILY SSF46785 7 79 3.52E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 PANTHER PTHR11751 16 101 2.9E-25 T 22-04-2016 YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.8E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.8E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 72 6.0E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 SUPERFAMILY SSF48008 81 213 7.32E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO3651 46b9ba1c6ded93a0336f3b82552ca827 220 Gene3D G3DSA:1.10.10.10 7 76 1.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1444 17ae3fa885b75160dcb11823a74fd680 113 SUPERFAMILY SSF141255 12 104 7.85E-30 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YPO1444 17ae3fa885b75160dcb11823a74fd680 113 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 13 104 3.3E-19 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YPO1444 17ae3fa885b75160dcb11823a74fd680 113 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 9 113 36.691 T 22-04-2016 IPR022866 Heat shock protein HspQ YPO1444 17ae3fa885b75160dcb11823a74fd680 113 PANTHER PTHR31350 5 98 5.0E-42 T 22-04-2016 YPO1444 17ae3fa885b75160dcb11823a74fd680 113 PANTHER PTHR31350:SF6 5 98 5.0E-42 T 22-04-2016 YPO1444 17ae3fa885b75160dcb11823a74fd680 113 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 12 109 8.0E-32 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YPO1444 17ae3fa885b75160dcb11823a74fd680 113 SMART SM00992 11 110 4.5E-36 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YPO2417 24a1e4555104bbe00e17cfb7f54609d2 114 SUPERFAMILY SSF103481 35 113 5.36E-14 T 22-04-2016 YPO2417 24a1e4555104bbe00e17cfb7f54609d2 114 PANTHER PTHR30561 1 113 2.3E-50 T 22-04-2016 YPO2417 24a1e4555104bbe00e17cfb7f54609d2 114 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 114 31.817 T 22-04-2016 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE UniPathway: UPA00030 YPO2417 24a1e4555104bbe00e17cfb7f54609d2 114 PANTHER PTHR30561:SF9 1 113 2.3E-50 T 22-04-2016 YPO2417 24a1e4555104bbe00e17cfb7f54609d2 114 Pfam PF00892 EamA-like transporter family 33 111 7.5E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO1156 383a4e4815c609fe07f3c24301031d7d 671 SUPERFAMILY SSF52540 4 415 5.33E-139 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Pfam PF04851 Type III restriction enzyme, res subunit 15 92 3.6E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 6.2E-19 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain YPO1156 383a4e4815c609fe07f3c24301031d7d 671 SUPERFAMILY SSF52540 459 582 2.39E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1156 383a4e4815c609fe07f3c24301031d7d 671 SUPERFAMILY SSF52540 37 82 2.39E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1156 383a4e4815c609fe07f3c24301031d7d 671 SMART SM00487 9 426 3.3E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1156 383a4e4815c609fe07f3c24301031d7d 671 PANTHER PTHR24029 1 670 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 YPO1156 383a4e4815c609fe07f3c24301031d7d 671 SUPERFAMILY SSF46600 620 667 2.48E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Gene3D G3DSA:3.40.50.300 421 582 3.3E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Gene3D G3DSA:4.10.860.10 626 670 3.4E-19 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Pfam PF00271 Helicase conserved C-terminal domain 435 545 1.5E-18 T 22-04-2016 IPR001650 Helicase, C-terminal YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Gene3D G3DSA:3.30.2060.10 159 231 5.5E-11 T 22-04-2016 YPO1156 383a4e4815c609fe07f3c24301031d7d 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 YPO1156 383a4e4815c609fe07f3c24301031d7d 671 SMART SM00490 460 546 6.7E-20 T 22-04-2016 IPR001650 Helicase, C-terminal YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Gene3D G3DSA:3.40.50.300 278 338 5.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Gene3D G3DSA:3.40.50.300 388 406 5.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Gene3D G3DSA:3.40.50.300 6 89 5.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 43.871 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 YPO1156 383a4e4815c609fe07f3c24301031d7d 671 Pfam PF02151 UvrB/uvrC motif 632 666 1.5E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 YPO2752 6372feb82ef47cf4072c08228c13cdb4 275 Gene3D G3DSA:3.30.1380.10 21 271 4.6E-105 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO2752 6372feb82ef47cf4072c08228c13cdb4 275 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 273 62.629 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YPO2752 6372feb82ef47cf4072c08228c13cdb4 275 SUPERFAMILY SSF55166 21 271 4.24E-100 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO2752 6372feb82ef47cf4072c08228c13cdb4 275 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 269 8.5E-95 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YPO2752 6372feb82ef47cf4072c08228c13cdb4 275 PIRSF PIRSF018455 3 275 1.7E-118 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 SUPERFAMILY SSF52343 254 395 7.46E-38 T 22-04-2016 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 2.8E-11 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPO2908 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 5.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 5.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 5.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 366 5.5E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 PANTHER PTHR22924 1 396 2.1E-132 T 22-04-2016 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 Gene3D G3DSA:2.40.30.10 149 254 6.2E-33 T 22-04-2016 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 58.211 T 22-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 6.6E-15 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 SUPERFAMILY SSF46458 1 142 1.83E-39 T 22-04-2016 IPR009050 Globin-like YPO2908 dc149e615b83d5e0c37bf08787661a22 396 Pfam PF00042 Globin 7 102 1.8E-13 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 Gene3D G3DSA:1.10.490.10 2 141 5.4E-56 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 Gene3D G3DSA:3.40.50.80 258 395 4.0E-33 T 22-04-2016 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 3.1E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 3.1E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 3.1E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 3.1E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YPO2908 dc149e615b83d5e0c37bf08787661a22 396 SUPERFAMILY SSF63380 148 253 9.03E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 PANTHER PTHR11070:SF19 1 664 0.0 T 22-04-2016 YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.4E-74 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 SUPERFAMILY SSF52540 2 639 8.59E-161 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.972 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:3.40.50.300 182 279 2.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:3.40.50.300 2 104 2.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:1.10.486.10 383 525 7.8E-38 T 22-04-2016 YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 PANTHER PTHR11070 1 664 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 1.2E-70 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:3.40.50.300 280 382 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:3.40.50.300 550 640 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3872 32aa5a57597bff4a78cc2b2d374ebe59 673 Gene3D G3DSA:1.10.10.160 108 181 7.3E-23 T 22-04-2016 IPR013986 DExx box DNA helicase domain YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 SUPERFAMILY SSF56784 1 271 6.58E-68 T 22-04-2016 IPR023214 HAD-like domain YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 PANTHER PTHR10000 1 273 1.1E-94 T 22-04-2016 YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 256 1.7E-5 T 22-04-2016 YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 1.7E-5 T 22-04-2016 YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 240 1.7E-5 T 22-04-2016 YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 6.4E-64 T 22-04-2016 IPR023214 HAD-like domain YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 22-04-2016 YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 7.6E-65 T 22-04-2016 IPR000150 Cof protein GO:0016787 YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 240 5.9E-24 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 Gene3D G3DSA:3.40.50.1000 1 73 8.9E-54 T 22-04-2016 IPR023214 HAD-like domain YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 Gene3D G3DSA:3.40.50.1000 176 272 8.9E-54 T 22-04-2016 IPR023214 HAD-like domain YPO1148 a1ec53445df4d0f1d8777578dc574abc 273 PANTHER PTHR10000:SF8 1 273 1.1E-94 T 22-04-2016 YPO0596 256f536e59d5ec09e81c7ed34c7c6fff 213 Gene3D G3DSA:2.60.60.30 19 205 2.0E-58 T 22-04-2016 YPO0596 256f536e59d5ec09e81c7ed34c7c6fff 213 PANTHER PTHR32097 1 212 1.3E-66 T 22-04-2016 YPO0596 256f536e59d5ec09e81c7ed34c7c6fff 213 Pfam PF02342 TerD domain 1 203 3.1E-53 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPO2441 035913bb5bca16b7ac6841736e65ca78 294 SUPERFAMILY SSF81345 5 260 1.11E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO2441 035913bb5bca16b7ac6841736e65ca78 294 PANTHER PTHR30477 2 294 4.4E-154 T 22-04-2016 YPO2441 035913bb5bca16b7ac6841736e65ca78 294 Pfam PF00950 ABC 3 transport family 10 265 1.4E-89 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YPO2441 035913bb5bca16b7ac6841736e65ca78 294 Gene3D G3DSA:1.10.3470.10 38 240 6.5E-10 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO2441 035913bb5bca16b7ac6841736e65ca78 294 PANTHER PTHR30477:SF13 2 294 4.4E-154 T 22-04-2016 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 PIRSF PIRSF004491 1 310 3.5E-103 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 SUPERFAMILY SSF82114 174 307 1.68E-43 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 SMART SM00904 183 307 3.0E-62 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 Gene3D G3DSA:3.40.50.620 1 187 1.8E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 PANTHER PTHR22749 1 308 3.6E-146 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 7.8E-113 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 SUPERFAMILY SSF52374 15 175 1.69E-36 T 22-04-2016 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 Gene3D G3DSA:2.40.30.30 188 307 1.8E-38 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 Pfam PF06574 FAD synthetase 12 167 4.2E-57 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 51 2.0E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 PANTHER PTHR22749:SF0 1 308 3.6E-146 T 22-04-2016 YPO0474 90b74a7072744f89f5dc3984a0d65eb3 312 Pfam PF01687 Riboflavin kinase 184 306 1.6E-37 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 Gene3D G3DSA:3.60.15.10 46 303 5.6E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 Pfam PF02112 cAMP phosphodiesterases class-II 39 337 4.5E-53 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 PANTHER PTHR28283:SF1 1 342 7.8E-140 T 22-04-2016 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 116 130 - T 22-04-2016 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 SUPERFAMILY SSF56281 40 318 4.74E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 139 160 4.5E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 293 304 4.5E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 112 130 4.5E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 248 259 4.5E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 267 280 4.5E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 PANTHER PTHR28283 1 342 7.8E-140 T 22-04-2016 YPO2696 dbd2d4b6e2d4a74e08608b92646212e0 343 PIRSF PIRSF000962 1 342 1.7E-130 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 SUPERFAMILY SSF52540 136 381 1.66E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 PANTHER PTHR32071:SF5 1 445 4.4E-258 T 22-04-2016 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:3.40.50.2300 4 123 3.3E-36 T 22-04-2016 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 Pfam PF00158 Sigma-54 interaction domain 137 303 5.1E-72 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:1.10.10.60 392 438 2.5E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:1.10.8.60 310 386 1.5E-22 T 22-04-2016 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 SUPERFAMILY SSF46689 388 438 1.85E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 Pfam PF00072 Response regulator receiver domain 10 118 1.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 SMART SM00448 7 118 2.8E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 SUPERFAMILY SSF52172 6 181 5.27E-43 T 22-04-2016 IPR011006 CheY-like superfamily YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 SMART SM00382 157 300 3.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 PANTHER PTHR32071 1 445 4.4E-258 T 22-04-2016 YPO2914 f09f451ac5ffb5870ac753c56edcee79 445 Gene3D G3DSA:3.40.50.300 135 308 3.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1050 9f51702f299d9c4c0274c26c373c200e 282 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 YPO1050 9f51702f299d9c4c0274c26c373c200e 282 Pfam PF01148 Cytidylyltransferase family 4 279 2.5E-71 T 22-04-2016 YPO1050 9f51702f299d9c4c0274c26c373c200e 282 PANTHER PTHR13773 2 279 1.1E-98 T 22-04-2016 YPO4023 43cb7935d2986aeb08063727aa03783a 319 PANTHER PTHR30472:SF27 1 319 1.4E-183 T 22-04-2016 YPO4023 43cb7935d2986aeb08063727aa03783a 319 SUPERFAMILY SSF81345 5 313 1.57E-67 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO4023 43cb7935d2986aeb08063727aa03783a 319 Pfam PF01032 FecCD transport family 13 313 4.4E-65 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO4023 43cb7935d2986aeb08063727aa03783a 319 Gene3D G3DSA:1.10.3470.10 4 315 5.3E-71 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO4023 43cb7935d2986aeb08063727aa03783a 319 PANTHER PTHR30472 1 319 1.4E-183 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO2613 ce71427ebb695bc3377af38697cc35b8 224 PANTHER PTHR30614 1 222 7.1E-145 T 22-04-2016 YPO2613 ce71427ebb695bc3377af38697cc35b8 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.0E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2613 ce71427ebb695bc3377af38697cc35b8 224 SUPERFAMILY SSF161098 14 209 4.06E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2613 ce71427ebb695bc3377af38697cc35b8 224 Gene3D G3DSA:1.10.3720.10 13 222 4.0E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2613 ce71427ebb695bc3377af38697cc35b8 224 PANTHER PTHR30614:SF1 1 222 7.1E-145 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 YPO2613 ce71427ebb695bc3377af38697cc35b8 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 1.6E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 PANTHER PTHR26402 1 224 5.3E-177 T 22-04-2016 YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 Gene3D G3DSA:1.10.10.10 126 222 5.3E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.7E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 SUPERFAMILY SSF52172 1 119 3.56E-37 T 22-04-2016 IPR011006 CheY-like superfamily YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 SUPERFAMILY SSF46894 124 222 1.81E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 PANTHER PTHR26402:SF575 1 224 5.3E-177 T 22-04-2016 YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 SMART SM00448 1 111 1.2E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 6.6E-90 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 SMART SM00862 146 221 3.5E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2001 e598aa7110f4ddc9563f1065273ad8c5 230 Gene3D G3DSA:3.40.50.2300 1 118 1.8E-37 T 22-04-2016 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 PANTHER PTHR22573:SF18 7 460 1.6E-202 T 22-04-2016 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.40.120.10 5 136 1.6E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF53738 151 259 3.37E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.40.120.10 170 252 8.5E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.30.310.50 381 459 6.0E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF53738 3 175 6.67E-39 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 374 2.5E-21 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 130 3.4E-34 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 383 454 4.3E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 PANTHER PTHR22573 7 460 1.6E-202 T 22-04-2016 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 2.0E-17 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF55957 377 459 6.8E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 SUPERFAMILY SSF53738 261 371 1.96E-25 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 Gene3D G3DSA:3.40.120.10 253 373 4.4E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 2.5E-28 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 2.5E-28 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 2.5E-28 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO2479 57cd7aecaf04f24746a33b913c833fe8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 2.5E-28 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YPO1781 af0504804082e0bdc0b9200acab6920a 316 PANTHER PTHR10992 1 177 6.8E-150 T 22-04-2016 YPO1781 af0504804082e0bdc0b9200acab6920a 316 PANTHER PTHR10992 214 314 6.8E-150 T 22-04-2016 YPO1781 af0504804082e0bdc0b9200acab6920a 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 3.93E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YPO1781 af0504804082e0bdc0b9200acab6920a 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 3.93E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YPO1781 af0504804082e0bdc0b9200acab6920a 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 3.93E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YPO1781 af0504804082e0bdc0b9200acab6920a 316 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 12 314 5.2E-127 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 YPO1781 af0504804082e0bdc0b9200acab6920a 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 3.44E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO1781 af0504804082e0bdc0b9200acab6920a 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 3.44E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO1781 af0504804082e0bdc0b9200acab6920a 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 3.44E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO1781 af0504804082e0bdc0b9200acab6920a 316 Gene3D G3DSA:3.40.50.1820 10 301 2.8E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1781 af0504804082e0bdc0b9200acab6920a 316 PIRSF PIRSF006431 2 316 3.2E-139 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 YPO1781 af0504804082e0bdc0b9200acab6920a 316 Pfam PF00561 alpha/beta hydrolase fold 41 297 1.6E-30 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO1781 af0504804082e0bdc0b9200acab6920a 316 SUPERFAMILY SSF53474 7 313 9.09E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1781 af0504804082e0bdc0b9200acab6920a 316 PANTHER PTHR10992:SF860 1 177 6.8E-150 T 22-04-2016 YPO1781 af0504804082e0bdc0b9200acab6920a 316 PANTHER PTHR10992:SF860 214 314 6.8E-150 T 22-04-2016 YPO0873 c0de60550fe545271f6fc39cefe0f162 512 PANTHER PTHR37465:SF1 468 512 5.2E-71 T 22-04-2016 YPO0873 c0de60550fe545271f6fc39cefe0f162 512 PANTHER PTHR37465:SF1 1 350 5.2E-71 T 22-04-2016 YPO0873 c0de60550fe545271f6fc39cefe0f162 512 PANTHER PTHR37465 468 512 5.2E-71 T 22-04-2016 YPO0873 c0de60550fe545271f6fc39cefe0f162 512 PANTHER PTHR37465 1 350 5.2E-71 T 22-04-2016 YPO0873 c0de60550fe545271f6fc39cefe0f162 512 Pfam PF05488 PAAR motif 9 54 8.3E-9 T 22-04-2016 IPR008727 PAAR motif YPO0873 c0de60550fe545271f6fc39cefe0f162 512 SUPERFAMILY SSF69369 210 416 1.1E-24 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 YPO0873 c0de60550fe545271f6fc39cefe0f162 512 Pfam PF06958 S-type Pyocin 269 408 6.6E-40 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 SUPERFAMILY SSF55120 61 227 5.6E-47 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 Pfam PF01479 S4 domain 1 46 5.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 Gene3D G3DSA:3.10.290.10 1 64 6.1E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 SMART SM00363 1 69 3.0E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 SUPERFAMILY SSF55174 1 55 2.21E-11 T 22-04-2016 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 PANTHER PTHR21600 1 230 8.3E-80 T 22-04-2016 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 PANTHER PTHR21600:SF19 1 230 8.3E-80 T 22-04-2016 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 2.1E-57 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPO1266 1c513d8c9cb06bb9788b2b8eb9631e57 235 Pfam PF00849 RNA pseudouridylate synthase 62 192 3.2E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 430 52.488 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 SUPERFAMILY SSF53448 378 391 5.42E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 SUPERFAMILY SSF53448 17 294 5.42E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 Gene3D G3DSA:3.90.550.10 21 301 4.7E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 Gene3D G3DSA:3.90.550.10 344 386 4.7E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 Pfam PF00483 Nucleotidyl transferase 22 291 1.3E-65 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 PANTHER PTHR22572:SF10 21 401 5.0E-184 T 22-04-2016 YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 PANTHER PTHR22572 21 401 5.0E-184 T 22-04-2016 YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.5E-154 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YPO3940 8022e1b6c737580f25e5cdfab7ff0b4d 476 SUPERFAMILY SSF51161 313 408 3.39E-19 T 22-04-2016 IPR011004 Trimeric LpxA-like YPO0163 d42293fbb37b93fc37b428b19f5dcd96 394 Pfam PF07690 Major Facilitator Superfamily 15 321 2.6E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO0163 d42293fbb37b93fc37b428b19f5dcd96 394 PANTHER PTHR23514 1 389 5.8E-107 T 22-04-2016 YPO0163 d42293fbb37b93fc37b428b19f5dcd96 394 PANTHER PTHR23514:SF3 1 389 5.8E-107 T 22-04-2016 YPO0163 d42293fbb37b93fc37b428b19f5dcd96 394 Gene3D G3DSA:1.20.1250.20 6 181 6.2E-15 T 22-04-2016 YPO0163 d42293fbb37b93fc37b428b19f5dcd96 394 SUPERFAMILY SSF103473 4 389 1.57E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0163 d42293fbb37b93fc37b428b19f5dcd96 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 390 28.778 T 22-04-2016 IPR023528 Major facilitator superfamily transporter, TsgA YPO0163 d42293fbb37b93fc37b428b19f5dcd96 394 Gene3D G3DSA:1.20.1250.20 207 380 1.6E-12 T 22-04-2016 YPO2133 216fdd7d3ceb7e766931954a5a018bd7 305 Gene3D G3DSA:3.40.1190.20 91 149 2.9E-4 T 22-04-2016 IPR029056 Ribokinase-like YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 SMART SM00798 137 461 2.3E-218 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 Gene3D G3DSA:3.40.50.1380 5 190 8.7E-86 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 PIRSF PIRSF000414 1 529 6.0E-227 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.674 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 2.0E-120 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 Gene3D G3DSA:3.40.140.20 377 519 1.0E-58 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 SMART SM00851 19 132 7.0E-62 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.5E-262 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 SUPERFAMILY SSF53927 221 529 2.41E-129 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 Pfam PF02142 MGS-like domain 19 132 2.9E-29 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 SUPERFAMILY SSF52335 7 196 1.57E-71 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 Gene3D G3DSA:3.40.140.20 253 372 1.9E-50 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPO3728 89fe3e4462724aadbe99fca3b5ff9f8c 529 PANTHER PTHR11692 5 529 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YPO0046 a474a8c6dc171e169fb3a3c4dfd50011 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPO0046 a474a8c6dc171e169fb3a3c4dfd50011 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.71 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 YPO0046 a474a8c6dc171e169fb3a3c4dfd50011 198 PANTHER PTHR30055:SF58 1 193 8.2E-123 T 22-04-2016 YPO0046 a474a8c6dc171e169fb3a3c4dfd50011 198 SUPERFAMILY SSF46689 10 73 9.48E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0046 a474a8c6dc171e169fb3a3c4dfd50011 198 SUPERFAMILY SSF48498 86 176 2.36E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO0046 a474a8c6dc171e169fb3a3c4dfd50011 198 PANTHER PTHR30055 1 193 8.2E-123 T 22-04-2016 YPO0046 a474a8c6dc171e169fb3a3c4dfd50011 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 1.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO0046 a474a8c6dc171e169fb3a3c4dfd50011 198 Gene3D G3DSA:1.10.357.10 8 179 1.6E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPO0951 9b430d515d66e9dcced229e8a3a815d0 239 Pfam PF02390 Putative methyltransferase 64 233 1.4E-60 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 YPO0951 9b430d515d66e9dcced229e8a3a815d0 239 PANTHER PTHR23417 5 239 3.4E-91 T 22-04-2016 YPO0951 9b430d515d66e9dcced229e8a3a815d0 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 1.5E-71 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 YPO0951 9b430d515d66e9dcced229e8a3a815d0 239 Gene3D G3DSA:3.40.50.150 57 193 8.3E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0951 9b430d515d66e9dcced229e8a3a815d0 239 SUPERFAMILY SSF53335 18 237 1.22E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0951 9b430d515d66e9dcced229e8a3a815d0 239 PANTHER PTHR23417:SF14 5 239 3.4E-91 T 22-04-2016 YPO0951 9b430d515d66e9dcced229e8a3a815d0 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 31.119 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 YPO1894 388a2ca9030913d0edc14e5fde31e936 286 PANTHER PTHR30406 1 286 6.9E-125 T 22-04-2016 YPO1894 388a2ca9030913d0edc14e5fde31e936 286 PANTHER PTHR30406:SF2 1 286 6.9E-125 T 22-04-2016 YPO1894 388a2ca9030913d0edc14e5fde31e936 286 Gene3D G3DSA:1.10.3720.10 56 284 3.3E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1894 388a2ca9030913d0edc14e5fde31e936 286 SUPERFAMILY SSF161098 51 275 1.44E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1894 388a2ca9030913d0edc14e5fde31e936 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 276 3.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0613 085b52744a4a39446f24c44356c022a4 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 283 1.7E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0613 085b52744a4a39446f24c44356c022a4 293 PANTHER PTHR32243 1 292 6.5E-108 T 22-04-2016 YPO0613 085b52744a4a39446f24c44356c022a4 293 SUPERFAMILY SSF161098 52 281 3.92E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0613 085b52744a4a39446f24c44356c022a4 293 PANTHER PTHR32243:SF13 1 292 6.5E-108 T 22-04-2016 YPO0613 085b52744a4a39446f24c44356c022a4 293 Gene3D G3DSA:1.10.3720.10 60 290 3.6E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2615 a23d13698fb21c51a28fe0db7ba3f12d 305 SUPERFAMILY SSF53850 3 277 6.73E-62 T 22-04-2016 YPO2615 a23d13698fb21c51a28fe0db7ba3f12d 305 PANTHER PTHR30085:SF2 11 303 7.2E-136 T 22-04-2016 YPO2615 a23d13698fb21c51a28fe0db7ba3f12d 305 Gene3D G3DSA:3.40.190.10 130 236 2.9E-31 T 22-04-2016 YPO2615 a23d13698fb21c51a28fe0db7ba3f12d 305 SMART SM00062 44 276 6.0E-63 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2615 a23d13698fb21c51a28fe0db7ba3f12d 305 Gene3D G3DSA:3.40.190.10 237 279 1.4E-28 T 22-04-2016 YPO2615 a23d13698fb21c51a28fe0db7ba3f12d 305 Gene3D G3DSA:3.40.190.10 41 129 1.4E-28 T 22-04-2016 YPO2615 a23d13698fb21c51a28fe0db7ba3f12d 305 PANTHER PTHR30085 11 303 7.2E-136 T 22-04-2016 YPO2615 a23d13698fb21c51a28fe0db7ba3f12d 305 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 274 2.7E-46 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO1704 66ceecd20b3b8c89f75e10c2f338b8d8 237 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 237 31.002 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 YPO1704 66ceecd20b3b8c89f75e10c2f338b8d8 237 SUPERFAMILY SSF48657 5 119 1.96E-39 T 22-04-2016 IPR016103 ProQ/FinO domain YPO1704 66ceecd20b3b8c89f75e10c2f338b8d8 237 PANTHER PTHR38106 1 237 9.1E-96 T 22-04-2016 YPO1704 66ceecd20b3b8c89f75e10c2f338b8d8 237 SMART SM00945 5 119 5.0E-61 T 22-04-2016 IPR016103 ProQ/FinO domain YPO1704 66ceecd20b3b8c89f75e10c2f338b8d8 237 Pfam PF04352 ProQ/FINO family 8 115 1.2E-42 T 22-04-2016 IPR016103 ProQ/FinO domain YPO1704 66ceecd20b3b8c89f75e10c2f338b8d8 237 PANTHER PTHR38106:SF1 1 237 9.1E-96 T 22-04-2016 YPO1704 66ceecd20b3b8c89f75e10c2f338b8d8 237 Gene3D G3DSA:1.10.1710.10 4 118 5.5E-35 T 22-04-2016 IPR016103 ProQ/FinO domain YPO1446 d9e8e44588124e2b8c402ee904357235 92 SUPERFAMILY SSF54975 3 92 6.11E-30 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPO1446 d9e8e44588124e2b8c402ee904357235 92 PANTHER PTHR10029 2 92 3.9E-36 T 22-04-2016 YPO1446 d9e8e44588124e2b8c402ee904357235 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPO1446 d9e8e44588124e2b8c402ee904357235 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPO1446 d9e8e44588124e2b8c402ee904357235 92 PRINTS PR00112 Acylphosphatase signature 61 81 7.5E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPO1446 d9e8e44588124e2b8c402ee904357235 92 PRINTS PR00112 Acylphosphatase signature 5 20 7.5E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPO1446 d9e8e44588124e2b8c402ee904357235 92 PRINTS PR00112 Acylphosphatase signature 26 51 7.5E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPO1446 d9e8e44588124e2b8c402ee904357235 92 Gene3D G3DSA:3.30.70.100 8 91 5.8E-30 T 22-04-2016 YPO1446 d9e8e44588124e2b8c402ee904357235 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 30.225 T 22-04-2016 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPO1446 d9e8e44588124e2b8c402ee904357235 92 Pfam PF00708 Acylphosphatase 6 91 1.4E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YPO0223 211d9feed7e2d2f269ca9fd76d452cb0 130 SUPERFAMILY SSF56047 5 129 2.09E-46 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPO0223 211d9feed7e2d2f269ca9fd76d452cb0 130 PANTHER PTHR11758 1 130 7.4E-63 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPO0223 211d9feed7e2d2f269ca9fd76d452cb0 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.795 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPO0223 211d9feed7e2d2f269ca9fd76d452cb0 130 Pfam PF00410 Ribosomal protein S8 5 129 1.7E-48 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPO0223 211d9feed7e2d2f269ca9fd76d452cb0 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YPO0223 211d9feed7e2d2f269ca9fd76d452cb0 130 Gene3D G3DSA:3.30.1490.10 74 129 1.1E-28 T 22-04-2016 YPO0223 211d9feed7e2d2f269ca9fd76d452cb0 130 Gene3D G3DSA:3.30.1370.30 2 72 2.4E-27 T 22-04-2016 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 SUPERFAMILY SSF46955 2 121 4.76E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 PANTHER PTHR30204 1 123 1.8E-59 T 22-04-2016 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 PANTHER PTHR30204:SF18 1 123 1.8E-59 T 22-04-2016 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 Gene3D G3DSA:1.10.1660.10 1 56 5.0E-28 T 22-04-2016 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.4E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.4E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.4E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 Gene3D G3DSA:1.10.1660.10 57 134 1.1E-30 T 22-04-2016 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 Pfam PF13411 MerR HTH family regulatory protein 3 69 3.5E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 2.6E-72 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 SMART SM00422 2 71 1.9E-31 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO0236 5e8c0bd933511bfb8ecdf616f430e417 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO2355 37eae07895b81fbc439daf1a4a580bf6 548 SUPERFAMILY SSF53850 37 539 1.57E-137 T 22-04-2016 YPO2355 37eae07895b81fbc439daf1a4a580bf6 548 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 85 107 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YPO2355 37eae07895b81fbc439daf1a4a580bf6 548 Gene3D G3DSA:3.90.76.10 46 224 1.1E-45 T 22-04-2016 YPO2355 37eae07895b81fbc439daf1a4a580bf6 548 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 459 1.4E-87 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPO2355 37eae07895b81fbc439daf1a4a580bf6 548 PANTHER PTHR30290:SF28 1 544 0.0 T 22-04-2016 YPO2355 37eae07895b81fbc439daf1a4a580bf6 548 PANTHER PTHR30290 1 544 0.0 T 22-04-2016 YPO2355 37eae07895b81fbc439daf1a4a580bf6 548 Gene3D G3DSA:3.10.105.10 295 510 4.6E-60 T 22-04-2016 YPO2355 37eae07895b81fbc439daf1a4a580bf6 548 PIRSF PIRSF002741 1 544 3.3E-102 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 182 30.388 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 180 1.2E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 PANTHER PTHR10938 10 183 1.2E-69 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 Gene3D G3DSA:3.10.20.80 13 86 1.2E-35 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 SUPERFAMILY SSF54364 13 86 4.05E-29 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 182 8.1E-74 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 Gene3D G3DSA:3.30.110.10 87 182 2.7E-38 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 SUPERFAMILY SSF55200 90 182 2.75E-32 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 YPO2432 dd0085454e06b6e1bcadaa918786fc9a 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 1.6E-31 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 YPO1724 d792232c47314edd81bfd7074e8e583a 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO1724 d792232c47314edd81bfd7074e8e583a 253 SUPERFAMILY SSF51735 9 252 3.58E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1724 d792232c47314edd81bfd7074e8e583a 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 2.7E-136 T 22-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 YPO1724 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 2.1E-58 T 22-04-2016 YPO1724 d792232c47314edd81bfd7074e8e583a 253 PANTHER PTHR24322:SF402 15 142 2.5E-66 T 22-04-2016 YPO1724 d792232c47314edd81bfd7074e8e583a 253 PANTHER PTHR24322:SF402 158 190 2.5E-66 T 22-04-2016 YPO1724 d792232c47314edd81bfd7074e8e583a 253 PANTHER PTHR24322 15 142 2.5E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 PANTHER PTHR24322 158 190 2.5E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 d792232c47314edd81bfd7074e8e583a 253 Gene3D G3DSA:3.40.50.720 6 252 3.9E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0419 b47a6efea8697c3824d284965f5c77c0 77 Pfam PF06305 Protein of unknown function (DUF1049) 22 71 3.1E-8 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 YPO3708 6a84c2f5ceeb9e506023cf38e7834dd4 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 2.1E-64 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO3708 6a84c2f5ceeb9e506023cf38e7834dd4 172 PANTHER PTHR34319 1 172 5.4E-67 T 22-04-2016 YPO3708 6a84c2f5ceeb9e506023cf38e7834dd4 172 Pfam PF05638 Type VI secretion system effector, Hcp 7 155 2.4E-32 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO3708 6a84c2f5ceeb9e506023cf38e7834dd4 172 SUPERFAMILY SSF141452 3 168 1.57E-39 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO3708 6a84c2f5ceeb9e506023cf38e7834dd4 172 Gene3D G3DSA:2.30.110.20 1 166 1.1E-32 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPMT1.68A 92cea5313083cd4415548b69252682f2 75 PANTHER PTHR13693:SF60 1 75 4.6E-52 T 22-04-2016 YPMT1.68A 92cea5313083cd4415548b69252682f2 75 Gene3D G3DSA:3.40.640.10 1 75 5.6E-30 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPMT1.68A 92cea5313083cd4415548b69252682f2 75 SUPERFAMILY SSF53383 1 75 3.71E-22 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPMT1.68A 92cea5313083cd4415548b69252682f2 75 PANTHER PTHR13693 1 75 4.6E-52 T 22-04-2016 YPMT1.68A 92cea5313083cd4415548b69252682f2 75 Pfam PF00155 Aminotransferase class I and II 2 75 2.0E-15 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO3402 a05082bb1bcf5b20a72ace6931e4f4f6 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 5.1E-110 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YPO3402 a05082bb1bcf5b20a72ace6931e4f4f6 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.814 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YPO3402 a05082bb1bcf5b20a72ace6931e4f4f6 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 4.7E-101 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YPO3402 a05082bb1bcf5b20a72ace6931e4f4f6 284 PANTHER PTHR21299:SF1 1 283 4.6E-138 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YPO3402 a05082bb1bcf5b20a72ace6931e4f4f6 284 Gene3D G3DSA:3.40.50.620 1 176 7.7E-76 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3402 a05082bb1bcf5b20a72ace6931e4f4f6 284 Gene3D G3DSA:3.30.1300.10 181 282 4.5E-29 T 22-04-2016 YPO3402 a05082bb1bcf5b20a72ace6931e4f4f6 284 PANTHER PTHR21299 1 283 4.6E-138 T 22-04-2016 YPO3402 a05082bb1bcf5b20a72ace6931e4f4f6 284 SUPERFAMILY SSF52374 1 281 1.66E-105 T 22-04-2016 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 SMART SM00060 542 617 3.3E-4 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 SUPERFAMILY SSF51055 634 678 4.71E-8 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 Pfam PF08031 Berberine and berberine like 480 536 4.5E-11 T 22-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 SUPERFAMILY SSF49265 536 637 1.23E-16 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 Gene3D G3DSA:3.30.43.10 22 94 2.8E-6 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 Pfam PF01565 FAD binding domain 33 181 1.4E-11 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 PANTHER PTHR11748:SF33 9 584 2.3E-166 T 22-04-2016 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 Gene3D G3DSA:2.10.10.20 634 671 1.1E-6 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 SUPERFAMILY SSF56176 5 221 5.14E-22 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPO0308 bade5a997e7d70a85a280f08fbec097f 685 Gene3D G3DSA:2.60.40.10 540 627 3.4E-15 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPO0308 bade5a997e7d70a85a280f08fbec097f 685 PANTHER PTHR11748 9 584 2.3E-166 T 22-04-2016 YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 Pfam PF01047 MarR family 29 87 5.0E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 PANTHER PTHR33164:SF16 2 141 3.7E-25 T 22-04-2016 YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 36.707 T 22-04-2016 IPR023071 Transcriptional regulator, SlyA YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 PANTHER PTHR33164 2 141 3.7E-25 T 22-04-2016 YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 SMART SM00347 22 123 3.9E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 8.5E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 8.5E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 8.5E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 8.5E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 SUPERFAMILY SSF46785 4 139 5.41E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 Gene3D G3DSA:1.10.10.10 2 137 1.5E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2374 36ffde40e4aaaf2701b5fe41a53464bd 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site YPO0874 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 Gene3D G3DSA:1.10.3290.10 29 273 1.1E-51 T 22-04-2016 IPR003812 Fido domain YPO0874 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 PANTHER PTHR13504:SF29 6 370 9.8E-167 T 22-04-2016 YPO0874 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 Pfam PF02661 Fic/DOC family 110 210 5.7E-19 T 22-04-2016 IPR003812 Fido domain YPO0874 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 SUPERFAMILY SSF140931 87 270 1.31E-31 T 22-04-2016 IPR003812 Fido domain YPO0874 429cd8bf104bf7c4c20d5cd6dfb6c7a9 380 PANTHER PTHR13504 6 370 9.8E-167 T 22-04-2016 YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 Gene3D G3DSA:2.60.40.1250 36 153 2.3E-47 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 SUPERFAMILY SSF74863 38 153 1.07E-42 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 PANTHER PTHR32234 3 595 3.3E-265 T 22-04-2016 YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 PANTHER PTHR32234:SF0 3 595 3.3E-265 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 591 41.063 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 198 403 1.7E-20 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 Gene3D G3DSA:3.40.30.10 479 589 1.6E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 ProSitePatterns PS00194 Thioredoxin family active site. 499 517 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 SUPERFAMILY SSF52833 476 589 9.55E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 Pfam PF13899 Thioredoxin-like 491 563 1.3E-12 T 22-04-2016 YPO0345 8e3109c0260b1d3b6a88b4e56c35313c 595 Pfam PF11412 Disulphide bond corrector protein DsbC 39 150 1.9E-36 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 SUPERFAMILY SSF90123 147 459 6.8E-65 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 PANTHER PTHR24221 143 710 5.5E-204 T 22-04-2016 YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 Pfam PF03412 Peptidase C39 family 21 133 7.5E-7 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 Gene3D G3DSA:1.20.1560.10 147 458 3.9E-73 T 22-04-2016 YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 18 712 0.0 T 22-04-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 Gene3D G3DSA:3.40.50.300 474 705 1.1E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 SUPERFAMILY SSF52540 468 710 1.23E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 Pfam PF00005 ABC transporter 491 640 3.7E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 Pfam PF00664 ABC transporter transmembrane region 162 428 1.1E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 SMART SM00382 500 684 2.7E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 Gene3D G3DSA:3.90.70.10 19 132 1.8E-17 T 22-04-2016 YPO2252 80be217d29689e1aca6aad8aeffcbd3c 712 PANTHER PTHR24221:SF246 143 710 5.5E-204 T 22-04-2016 YPO3902 aee481b9d7ae6d09892b234c537154ac 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YPO3902 aee481b9d7ae6d09892b234c537154ac 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YPO3902 aee481b9d7ae6d09892b234c537154ac 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YPO3902 aee481b9d7ae6d09892b234c537154ac 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YPO3902 aee481b9d7ae6d09892b234c537154ac 507 SUPERFAMILY SSF52540 189 502 2.98E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3902 aee481b9d7ae6d09892b234c537154ac 507 PANTHER PTHR32039:SF7 1 504 3.8E-266 T 22-04-2016 IPR004482 Mg chelatase-related protein YPO3902 aee481b9d7ae6d09892b234c537154ac 507 Gene3D G3DSA:3.40.50.300 190 387 1.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3902 aee481b9d7ae6d09892b234c537154ac 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 7.0E-213 T 22-04-2016 IPR004482 Mg chelatase-related protein YPO3902 aee481b9d7ae6d09892b234c537154ac 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 3.7E-30 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain YPO3902 aee481b9d7ae6d09892b234c537154ac 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 2.1E-89 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain YPO3902 aee481b9d7ae6d09892b234c537154ac 507 SUPERFAMILY SSF54211 10 169 1.56E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3902 aee481b9d7ae6d09892b234c537154ac 507 PANTHER PTHR32039 1 504 3.8E-266 T 22-04-2016 YPO3902 aee481b9d7ae6d09892b234c537154ac 507 SMART SM00382 210 390 7.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3902 aee481b9d7ae6d09892b234c537154ac 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 7.6E-45 T 22-04-2016 YPO3902 aee481b9d7ae6d09892b234c537154ac 507 Gene3D G3DSA:3.30.230.10 5 161 9.7E-25 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO3842 8cf016f7358d53e53cf1c080e5419296 238 Pfam PF00702 haloacid dehalogenase-like hydrolase 10 196 5.1E-9 T 22-04-2016 YPO3842 8cf016f7358d53e53cf1c080e5419296 238 Gene3D G3DSA:3.40.50.1000 106 238 2.2E-29 T 22-04-2016 IPR023214 HAD-like domain YPO3842 8cf016f7358d53e53cf1c080e5419296 238 Gene3D G3DSA:3.40.50.1000 10 45 3.4E-5 T 22-04-2016 IPR023214 HAD-like domain YPO3842 8cf016f7358d53e53cf1c080e5419296 238 PANTHER PTHR12725:SF65 1 238 4.6E-85 T 22-04-2016 YPO3842 8cf016f7358d53e53cf1c080e5419296 238 SUPERFAMILY SSF56784 10 238 6.59E-40 T 22-04-2016 IPR023214 HAD-like domain YPO3842 8cf016f7358d53e53cf1c080e5419296 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 119 201 5.9E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO3842 8cf016f7358d53e53cf1c080e5419296 238 PANTHER PTHR12725 1 238 4.6E-85 T 22-04-2016 YPO2400 31275139bee397d5a4dd05ac89376b30 406 SUPERFAMILY SSF53383 4 401 9.93E-126 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO2400 31275139bee397d5a4dd05ac89376b30 406 Gene3D G3DSA:3.90.1150.10 286 400 1.3E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO2400 31275139bee397d5a4dd05ac89376b30 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPO2400 31275139bee397d5a4dd05ac89376b30 406 PANTHER PTHR11601 6 405 6.7E-194 T 22-04-2016 YPO2400 31275139bee397d5a4dd05ac89376b30 406 Pfam PF00266 Aminotransferase class-V 25 394 8.2E-159 T 22-04-2016 IPR000192 Aminotransferase class V domain YPO2400 31275139bee397d5a4dd05ac89376b30 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 1.2E-180 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPO2400 31275139bee397d5a4dd05ac89376b30 406 Gene3D G3DSA:3.40.640.10 36 285 2.3E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO2400 31275139bee397d5a4dd05ac89376b30 406 PANTHER PTHR11601:SF17 6 405 6.7E-194 T 22-04-2016 YPO2400 31275139bee397d5a4dd05ac89376b30 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 72.925 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPO0303 36e459cfbe5aec4ee2042e9ef9651a90 247 PANTHER PTHR30251:SF3 17 247 1.6E-139 T 22-04-2016 YPO0303 36e459cfbe5aec4ee2042e9ef9651a90 247 SUPERFAMILY SSF49584 165 239 3.79E-5 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO0303 36e459cfbe5aec4ee2042e9ef9651a90 247 PANTHER PTHR30251 17 247 1.6E-139 T 22-04-2016 YPO0303 36e459cfbe5aec4ee2042e9ef9651a90 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 47 158 1.7E-17 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO0303 36e459cfbe5aec4ee2042e9ef9651a90 247 SUPERFAMILY SSF49354 43 157 6.98E-16 T 22-04-2016 IPR008962 PapD-like YPO0303 36e459cfbe5aec4ee2042e9ef9651a90 247 Gene3D G3DSA:2.60.40.360 47 158 6.0E-11 T 22-04-2016 IPR008962 PapD-like YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.1E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 9.2E-134 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 SUPERFAMILY SSF160544 244 351 1.11E-40 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 9.8E-125 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 PANTHER PTHR30531 3 361 2.8E-161 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 PANTHER PTHR30531:SF0 3 361 2.8E-161 T 22-04-2016 YPO1790 bd632b8200acda4c757ba09fe1fdd0d7 386 Gene3D G3DSA:3.40.1690.10 218 357 3.7E-64 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YPO1160 eb529d785dd614756c992ad1ad9afd3f 159 PANTHER PTHR22960 1 158 1.3E-109 T 22-04-2016 YPO1160 eb529d785dd614756c992ad1ad9afd3f 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.065 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 YPO1160 eb529d785dd614756c992ad1ad9afd3f 159 Gene3D G3DSA:3.30.70.640 3 157 2.4E-69 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 YPO1160 eb529d785dd614756c992ad1ad9afd3f 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 3.4E-71 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 YPO1160 eb529d785dd614756c992ad1ad9afd3f 159 Pfam PF01967 MoaC family 15 150 2.4E-54 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 YPO1160 eb529d785dd614756c992ad1ad9afd3f 159 SUPERFAMILY SSF55040 11 155 5.36E-61 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 YPO2974 eb065307b6d08869cf21e8dc0d903ac3 174 PANTHER PTHR30529 1 174 2.0E-104 T 22-04-2016 YPO2974 eb065307b6d08869cf21e8dc0d903ac3 174 SUPERFAMILY SSF81342 3 174 9.42E-29 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPO2974 eb065307b6d08869cf21e8dc0d903ac3 174 PANTHER PTHR30529:SF3 1 174 2.0E-104 T 22-04-2016 YPO2974 eb065307b6d08869cf21e8dc0d903ac3 174 Pfam PF01292 Prokaryotic cytochrome b561 4 173 5.1E-22 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YPO3514 abbeebf79cc8433f91ab753463675bde 133 SUPERFAMILY SSF46955 21 91 2.29E-23 T 22-04-2016 IPR009061 Putative DNA-binding domain YPO3514 abbeebf79cc8433f91ab753463675bde 133 Pfam PF02316 Mu DNA-binding domain 27 79 1.2E-13 T 22-04-2016 IPR003314 Mu-type HTH domain GO:0003677 YPO3514 abbeebf79cc8433f91ab753463675bde 133 Gene3D G3DSA:1.10.10.10 20 92 8.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 SUPERFAMILY SSF52440 2 122 1.73E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 183.522 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 Gene3D G3DSA:3.30.470.20 192 296 3.0E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 PANTHER PTHR21621:SF4 1 318 3.4E-173 T 22-04-2016 YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 2.5E-80 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 4.5E-138 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 7.2E-48 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 PANTHER PTHR21621 1 318 3.4E-173 T 22-04-2016 YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 Gene3D G3DSA:3.40.50.20 2 129 7.6E-57 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 Gene3D G3DSA:3.30.1490.20 137 191 1.8E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO0935 5b1c9bbaa676c6e651fac7b190323325 319 SUPERFAMILY SSF56059 123 313 6.36E-58 T 22-04-2016 YPO2634 c9628b34dc883949471b57efe94bd01f 148 SUPERFAMILY SSF46785 5 134 2.91E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2634 c9628b34dc883949471b57efe94bd01f 148 Pfam PF01475 Ferric uptake regulator family 11 130 6.9E-47 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YPO2634 c9628b34dc883949471b57efe94bd01f 148 PANTHER PTHR33202 1 146 4.2E-47 T 22-04-2016 YPO2634 c9628b34dc883949471b57efe94bd01f 148 Gene3D G3DSA:1.10.10.10 2 82 1.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 Pfam PF00072 Response regulator receiver domain 6 120 7.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 PANTHER PTHR26402:SF510 4 214 5.7E-153 T 22-04-2016 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 SUPERFAMILY SSF52172 3 136 2.7E-22 T 22-04-2016 IPR011006 CheY-like superfamily YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 SMART SM00421 148 205 2.3E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 8.1E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 8.1E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 8.1E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 Gene3D G3DSA:3.40.50.2300 2 125 7.1E-22 T 22-04-2016 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 Gene3D G3DSA:1.10.10.10 126 207 4.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 PANTHER PTHR26402 4 214 5.7E-153 T 22-04-2016 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 SMART SM00448 4 120 4.3E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.8E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 SUPERFAMILY SSF46894 144 206 1.84E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO1218 2459f28e853cc1b5fe290d35a9d9b383 217 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.731 T 22-04-2016 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 PANTHER PTHR30244 207 400 3.2E-131 T 22-04-2016 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 PANTHER PTHR30244 2 172 3.2E-131 T 22-04-2016 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 Gene3D G3DSA:1.20.1330.10 58 174 5.7E-33 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 Gene3D G3DSA:1.20.1330.10 302 355 5.7E-33 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 SUPERFAMILY SSF64518 1 400 2.88E-68 T 22-04-2016 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 Pfam PF00700 Bacterial flagellin C-terminal helical region 316 398 9.4E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 PANTHER PTHR30244:SF1 207 400 3.2E-131 T 22-04-2016 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 PANTHER PTHR30244:SF1 2 172 3.2E-131 T 22-04-2016 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 1.3E-27 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 PRINTS PR00207 Flagellin signature 76 95 3.3E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 PRINTS PR00207 Flagellin signature 37 54 3.3E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO0739 a5c33e2acd6993824a04ab011afd449c 401 PRINTS PR00207 Flagellin signature 111 134 3.3E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO2700 4ca9726bdcf4518d64f5fae1cee2e085 245 Pfam PF03746 LamB/YcsF family 3 235 6.5E-94 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YPO2700 4ca9726bdcf4518d64f5fae1cee2e085 245 PANTHER PTHR30292:SF0 1 245 2.7E-133 T 22-04-2016 YPO2700 4ca9726bdcf4518d64f5fae1cee2e085 245 SUPERFAMILY SSF88713 2 243 2.52E-93 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO2700 4ca9726bdcf4518d64f5fae1cee2e085 245 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 42.935 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YPO2700 4ca9726bdcf4518d64f5fae1cee2e085 245 PANTHER PTHR30292 1 245 2.7E-133 T 22-04-2016 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 Gene3D G3DSA:3.90.1170.10 22 133 1.5E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 SUPERFAMILY SSF54686 3 133 4.84E-55 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 PANTHER PTHR12220 1 136 2.2E-76 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.4E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.3E-60 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.821 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YPO0217 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO2387 90362defb78a9eafd61b12087e2f7016 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2387 90362defb78a9eafd61b12087e2f7016 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.6E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2387 90362defb78a9eafd61b12087e2f7016 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.6E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2387 90362defb78a9eafd61b12087e2f7016 341 PANTHER PTHR30146 1 340 2.7E-166 T 22-04-2016 YPO2387 90362defb78a9eafd61b12087e2f7016 341 SUPERFAMILY SSF47413 1 59 2.25E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2387 90362defb78a9eafd61b12087e2f7016 341 PANTHER PTHR30146:SF30 1 340 2.7E-166 T 22-04-2016 YPO2387 90362defb78a9eafd61b12087e2f7016 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2387 90362defb78a9eafd61b12087e2f7016 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 7.4E-42 T 22-04-2016 YPO2387 90362defb78a9eafd61b12087e2f7016 341 Gene3D G3DSA:3.40.50.2300 61 170 2.3E-34 T 22-04-2016 YPO2387 90362defb78a9eafd61b12087e2f7016 341 Gene3D G3DSA:1.10.260.40 2 60 1.1E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2387 90362defb78a9eafd61b12087e2f7016 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 63.616 T 22-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 YPO2387 90362defb78a9eafd61b12087e2f7016 341 SMART SM00354 1 71 2.0E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2387 90362defb78a9eafd61b12087e2f7016 341 SUPERFAMILY SSF53822 60 340 1.02E-95 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO2387 90362defb78a9eafd61b12087e2f7016 341 Gene3D G3DSA:3.40.50.2300 171 332 4.6E-62 T 22-04-2016 YPO0728 5c2610ea0c5837b523582752c8cef9c3 261 Pfam PF00460 Flagella basal body rod protein 5 35 1.7E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO0728 5c2610ea0c5837b523582752c8cef9c3 261 SUPERFAMILY SSF117143 92 222 4.45E-37 T 22-04-2016 YPO0728 5c2610ea0c5837b523582752c8cef9c3 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 4.7E-27 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0728 5c2610ea0c5837b523582752c8cef9c3 261 PANTHER PTHR30435:SF19 1 261 3.8E-133 T 22-04-2016 YPO0728 5c2610ea0c5837b523582752c8cef9c3 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 1.4E-34 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO0728 5c2610ea0c5837b523582752c8cef9c3 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 9.7E-43 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO0728 5c2610ea0c5837b523582752c8cef9c3 261 PANTHER PTHR30435 1 261 3.8E-133 T 22-04-2016 YPO0728 5c2610ea0c5837b523582752c8cef9c3 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPO0728 5c2610ea0c5837b523582752c8cef9c3 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 3.6E-109 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 YPO0141 ba38b511ab295d7ae61665c277592317 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 2.3E-11 T 22-04-2016 IPR023214 HAD-like domain YPO0141 ba38b511ab295d7ae61665c277592317 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 6.1E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0141 ba38b511ab295d7ae61665c277592317 226 PANTHER PTHR18901 1 224 1.3E-143 T 22-04-2016 YPO0141 ba38b511ab295d7ae61665c277592317 226 PANTHER PTHR18901:SF7 1 224 1.3E-143 T 22-04-2016 YPO0141 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0141 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0141 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0141 ba38b511ab295d7ae61665c277592317 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0141 ba38b511ab295d7ae61665c277592317 226 Gene3D G3DSA:3.40.50.1000 10 216 1.8E-28 T 22-04-2016 IPR023214 HAD-like domain YPO0141 ba38b511ab295d7ae61665c277592317 226 SUPERFAMILY SSF56784 6 217 4.96E-43 T 22-04-2016 IPR023214 HAD-like domain YPO0585 4350ecf0f5c0870fcf3276d3782b7c22 331 Gene3D G3DSA:3.30.360.10 143 324 6.6E-65 T 22-04-2016 YPO0585 4350ecf0f5c0870fcf3276d3782b7c22 331 SUPERFAMILY SSF55347 127 292 5.07E-23 T 22-04-2016 YPO0585 4350ecf0f5c0870fcf3276d3782b7c22 331 Gene3D G3DSA:3.40.50.720 1 142 4.0E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0585 4350ecf0f5c0870fcf3276d3782b7c22 331 PANTHER PTHR22604 1 316 1.3E-158 T 22-04-2016 YPO0585 4350ecf0f5c0870fcf3276d3782b7c22 331 PANTHER PTHR22604:SF76 1 316 1.3E-158 T 22-04-2016 YPO0585 4350ecf0f5c0870fcf3276d3782b7c22 331 SUPERFAMILY SSF51735 2 152 4.57E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0585 4350ecf0f5c0870fcf3276d3782b7c22 331 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 2.4E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPO1359 cc76fba632ee557a0b75d966750a6286 340 Gene3D G3DSA:3.10.20.30 242 339 1.6E-25 T 22-04-2016 IPR012675 Beta-grasp domain YPO1359 cc76fba632ee557a0b75d966750a6286 340 PANTHER PTHR19370 12 264 1.5E-145 T 22-04-2016 YPO1359 cc76fba632ee557a0b75d966750a6286 340 Gene3D G3DSA:2.40.30.10 17 109 5.1E-18 T 22-04-2016 YPO1359 cc76fba632ee557a0b75d966750a6286 340 SUPERFAMILY SSF52343 116 245 2.36E-30 T 22-04-2016 YPO1359 cc76fba632ee557a0b75d966750a6286 340 Pfam PF00970 Oxidoreductase FAD-binding domain 39 110 2.0E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPO1359 cc76fba632ee557a0b75d966750a6286 340 Pfam PF00175 Oxidoreductase NAD-binding domain 122 225 6.2E-16 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPO1359 cc76fba632ee557a0b75d966750a6286 340 SUPERFAMILY SSF54292 234 338 4.98E-24 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO1359 cc76fba632ee557a0b75d966750a6286 340 SUPERFAMILY SSF63380 17 111 2.04E-21 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO1359 cc76fba632ee557a0b75d966750a6286 340 PANTHER PTHR19370:SF89 12 264 1.5E-145 T 22-04-2016 YPO1359 cc76fba632ee557a0b75d966750a6286 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 266 332 8.1E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO1359 cc76fba632ee557a0b75d966750a6286 340 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 3.2E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 YPO1359 cc76fba632ee557a0b75d966750a6286 340 PRINTS PR00406 Cytochrome B5 reductase signature 121 140 3.2E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 YPO1359 cc76fba632ee557a0b75d966750a6286 340 PRINTS PR00406 Cytochrome B5 reductase signature 61 68 3.2E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 YPO1359 cc76fba632ee557a0b75d966750a6286 340 Gene3D G3DSA:3.40.50.80 110 241 2.9E-30 T 22-04-2016 YPO1359 cc76fba632ee557a0b75d966750a6286 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 291 299 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPO2406 7e35f613360c7915d9abdf71add3c13d 138 SUPERFAMILY SSF54637 20 136 7.47E-31 T 22-04-2016 IPR029069 HotDog domain YPO2406 7e35f613360c7915d9abdf71add3c13d 138 PANTHER PTHR12418 3 138 2.4E-54 T 22-04-2016 YPO2406 7e35f613360c7915d9abdf71add3c13d 138 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 42.445 T 22-04-2016 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO2406 7e35f613360c7915d9abdf71add3c13d 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 8.2E-46 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain YPO2406 7e35f613360c7915d9abdf71add3c13d 138 Pfam PF03061 Thioesterase superfamily 50 127 2.2E-16 T 22-04-2016 IPR006683 Thioesterase domain YPO2406 7e35f613360c7915d9abdf71add3c13d 138 PANTHER PTHR12418:SF33 3 138 2.4E-54 T 22-04-2016 YPO2406 7e35f613360c7915d9abdf71add3c13d 138 Gene3D G3DSA:3.10.129.10 2 137 5.0E-51 T 22-04-2016 IPR029069 HotDog domain YPO2948 bd7f7bc2cb811613ee8e2e10068065a0 341 PANTHER PTHR35564 6 341 4.8E-252 T 22-04-2016 YPO2948 bd7f7bc2cb811613ee8e2e10068065a0 341 PANTHER PTHR35564:SF1 6 341 4.8E-252 T 22-04-2016 YPO2948 bd7f7bc2cb811613ee8e2e10068065a0 341 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 321 7.9E-96 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPO2948 bd7f7bc2cb811613ee8e2e10068065a0 341 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 23 320 9.1E-83 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPO3989 67b1061026b728e824b8d1b851256f06 66 PANTHER PTHR35530:SF1 1 66 5.2E-27 T 22-04-2016 YPO3989 67b1061026b728e824b8d1b851256f06 66 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 3.5E-30 T 22-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 YPO3989 67b1061026b728e824b8d1b851256f06 66 PANTHER PTHR35530 1 66 5.2E-27 T 22-04-2016 YPO3989 67b1061026b728e824b8d1b851256f06 66 SUPERFAMILY SSF55331 2 64 3.38E-23 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily YPO3989 67b1061026b728e824b8d1b851256f06 66 Gene3D G3DSA:3.30.429.20 1 61 4.9E-30 T 22-04-2016 YPO3989 67b1061026b728e824b8d1b851256f06 66 Pfam PF01361 Tautomerase enzyme 2 61 2.3E-24 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 YPO0463 e85ff4edc623ab32d86b88ad3f055bb7 317 SUPERFAMILY SSF51569 1 316 6.07E-116 T 22-04-2016 YPO0463 e85ff4edc623ab32d86b88ad3f055bb7 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO0463 e85ff4edc623ab32d86b88ad3f055bb7 317 PANTHER PTHR10683:SF18 1 317 3.7E-178 T 22-04-2016 YPO0463 e85ff4edc623ab32d86b88ad3f055bb7 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO0463 e85ff4edc623ab32d86b88ad3f055bb7 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.772 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO0463 e85ff4edc623ab32d86b88ad3f055bb7 317 Pfam PF00923 Transaldolase 14 313 1.2E-101 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO0463 e85ff4edc623ab32d86b88ad3f055bb7 317 PANTHER PTHR10683 1 317 3.7E-178 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO0463 e85ff4edc623ab32d86b88ad3f055bb7 317 Gene3D G3DSA:3.20.20.70 3 315 5.0E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0463 e85ff4edc623ab32d86b88ad3f055bb7 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 1.2E-162 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 Gene3D G3DSA:3.20.20.70 436 780 4.8E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 Gene3D G3DSA:3.60.20.10 12 432 8.8E-173 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 Pfam PF04898 Glutamate synthase central domain 456 736 1.6E-104 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 SUPERFAMILY SSF51395 433 1190 1.24E-250 T 22-04-2016 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 Gene3D G3DSA:3.20.20.70 810 1200 6.0E-164 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 Pfam PF01493 GXGXG motif 1238 1421 7.6E-76 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 PANTHER PTHR11938:SF1 1 1478 0.0 T 22-04-2016 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 SUPERFAMILY SSF69336 1213 1467 1.83E-89 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 PANTHER PTHR11938 1 1478 0.0 T 22-04-2016 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 Pfam PF01645 Conserved region in glutamate synthase 792 1158 5.3E-156 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 Gene3D G3DSA:2.160.20.60 1212 1467 4.4E-97 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 Pfam PF00310 Glutamine amidotransferases class-II 12 424 3.8E-176 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain YPO3557 5a3102351812a305a0bad56f824dd9ac 1488 SUPERFAMILY SSF56235 12 428 7.41E-150 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO1714 101e25b2ae6abc1602de23a4f17b2def 263 SUPERFAMILY SSF55781 77 259 4.58E-52 T 22-04-2016 IPR029016 GAF domain-like YPO1714 101e25b2ae6abc1602de23a4f17b2def 263 SUPERFAMILY SSF46785 13 86 8.84E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1714 101e25b2ae6abc1602de23a4f17b2def 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 1.2E-40 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal YPO1714 101e25b2ae6abc1602de23a4f17b2def 263 PANTHER PTHR30136:SF7 1 263 4.3E-133 T 22-04-2016 YPO1714 101e25b2ae6abc1602de23a4f17b2def 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 4.4E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YPO1714 101e25b2ae6abc1602de23a4f17b2def 263 Gene3D G3DSA:1.10.10.10 12 85 1.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1714 101e25b2ae6abc1602de23a4f17b2def 263 PANTHER PTHR30136 1 263 4.3E-133 T 22-04-2016 YPO1714 101e25b2ae6abc1602de23a4f17b2def 263 SMART SM00346 13 102 1.4E-36 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YPO1714 101e25b2ae6abc1602de23a4f17b2def 263 Gene3D G3DSA:3.30.450.40 86 261 9.1E-66 T 22-04-2016 IPR029016 GAF domain-like YPO3613 584a960c3364e84bba0eec679aba351d 732 SUPERFAMILY SSF69279 114 289 2.42E-56 T 22-04-2016 YPO3613 584a960c3364e84bba0eec679aba351d 732 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 113 620 3.1E-201 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO3613 584a960c3364e84bba0eec679aba351d 732 PANTHER PTHR32305 6 643 0.0 T 22-04-2016 YPO3613 584a960c3364e84bba0eec679aba351d 732 Gene3D G3DSA:3.55.50.10 202 294 2.3E-35 T 22-04-2016 YPO3613 584a960c3364e84bba0eec679aba351d 732 SUPERFAMILY SSF69255 466 553 6.02E-34 T 22-04-2016 YPO3613 584a960c3364e84bba0eec679aba351d 732 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 126 605 2.1E-191 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO3613 584a960c3364e84bba0eec679aba351d 732 Pfam PF05954 Phage late control gene D protein (GPD) 134 431 2.8E-83 T 22-04-2016 YPO3613 584a960c3364e84bba0eec679aba351d 732 PANTHER PTHR32305:SF11 6 643 0.0 T 22-04-2016 YPO3613 584a960c3364e84bba0eec679aba351d 732 SUPERFAMILY SSF69279 293 467 4.08E-42 T 22-04-2016 YPO3613 584a960c3364e84bba0eec679aba351d 732 Gene3D G3DSA:2.40.50.230 472 553 5.4E-41 T 22-04-2016 IPR006531 Gp5 N-terminal YPO3613 584a960c3364e84bba0eec679aba351d 732 SUPERFAMILY SSF69349 544 730 3.37E-36 T 22-04-2016 YPO3660 1c143fe2d9eb4b7125ff233bac97f673 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.394 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPO3660 1c143fe2d9eb4b7125ff233bac97f673 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.9E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPO3660 1c143fe2d9eb4b7125ff233bac97f673 150 Gene3D G3DSA:3.40.50.9100 5 147 5.1E-67 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPO3660 1c143fe2d9eb4b7125ff233bac97f673 150 PIRSF PIRSF001399 3 149 4.7E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPO3660 1c143fe2d9eb4b7125ff233bac97f673 150 SUPERFAMILY SSF52304 6 148 1.1E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPO3660 1c143fe2d9eb4b7125ff233bac97f673 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPO3660 1c143fe2d9eb4b7125ff233bac97f673 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 150 2.0E-71 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPO3660 1c143fe2d9eb4b7125ff233bac97f673 150 PANTHER PTHR21272 2 150 3.7E-90 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPO3660 1c143fe2d9eb4b7125ff233bac97f673 150 Pfam PF01220 Dehydroquinase class II 7 142 4.4E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YPO3127 ff66418a3665dc58f7172eeeefcc96b7 178 Pfam PF07445 Primosomal replication protein priC 9 175 1.1E-54 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 SUPERFAMILY SSF46785 1 110 5.14E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 PANTHER PTHR30346 1 305 1.4E-149 T 22-04-2016 YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 SUPERFAMILY SSF53850 89 297 2.33E-45 T 22-04-2016 YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Gene3D G3DSA:1.10.10.10 1 82 1.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Gene3D G3DSA:3.40.190.10 176 267 1.2E-35 T 22-04-2016 YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Pfam PF03466 LysR substrate binding domain 88 293 3.3E-51 T 22-04-2016 IPR005119 LysR, substrate-binding YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 PANTHER PTHR30346:SF15 1 305 1.4E-149 T 22-04-2016 YPO3915 9dcfcf1a3706e467c0fc06fdaeb72a93 305 Gene3D G3DSA:3.40.190.10 90 175 7.2E-19 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 3.1E-55 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 3.1E-55 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 3.1E-55 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 3.1E-55 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 3.1E-55 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 3.1E-55 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 3.1E-55 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 1.0E-94 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PANTHER PTHR22773:SF50 1 569 4.3E-241 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 4.7E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 4.7E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 4.7E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 4.7E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 PANTHER PTHR22773 1 569 4.3E-241 T 22-04-2016 YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 1.8E-23 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal YPO2545 ce0cd3d6d26704ed9202dca133b11d35 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 3.0E-231 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 YPO3807 28a21f8131b1ee37012722f45a602b81 308 PANTHER PTHR11795:SF371 7 308 4.5E-150 T 22-04-2016 YPO3807 28a21f8131b1ee37012722f45a602b81 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 1.3E-63 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3807 28a21f8131b1ee37012722f45a602b81 308 PANTHER PTHR11795 7 308 4.5E-150 T 22-04-2016 YPO2415 3c0656ff598bf8eae2309f5fcdd0f397 154 Gene3D G3DSA:3.90.1720.10 36 154 4.8E-39 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO2415 3c0656ff598bf8eae2309f5fcdd0f397 154 SUPERFAMILY SSF54001 34 154 4.17E-38 T 22-04-2016 YPO2415 3c0656ff598bf8eae2309f5fcdd0f397 154 PANTHER PTHR21666:SF210 35 154 4.5E-41 T 22-04-2016 YPO2415 3c0656ff598bf8eae2309f5fcdd0f397 154 PANTHER PTHR21666 35 154 4.5E-41 T 22-04-2016 YPO2415 3c0656ff598bf8eae2309f5fcdd0f397 154 Pfam PF00877 NlpC/P60 family 47 153 1.3E-27 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 418 1.6E-20 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 PANTHER PTHR23135:SF5 14 469 3.7E-235 T 22-04-2016 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 SUPERFAMILY SSF53244 323 477 2.38E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Gene3D G3DSA:3.40.1190.10 108 325 4.8E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 PANTHER PTHR23135 14 469 3.7E-235 T 22-04-2016 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 SUPERFAMILY SSF53623 105 322 1.57E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 SUPERFAMILY SSF51984 20 106 8.89E-29 T 22-04-2016 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Gene3D G3DSA:3.40.50.720 20 107 2.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.595 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Gene3D G3DSA:3.90.190.20 326 477 5.6E-56 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Pfam PF01225 Mur ligase family, catalytic domain 21 119 7.6E-30 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 2.0E-182 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO0556 4ecdbd9a7c4cb9e1ed647fa4a39101b6 491 Pfam PF08245 Mur ligase middle domain 124 304 3.2E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 PIRSF PIRSF005901 1 190 7.6E-60 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 45.424 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.7E-17 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 Gene3D G3DSA:2.30.30.30 1 64 1.2E-14 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 PANTHER PTHR30053 1 190 9.6E-134 T 22-04-2016 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 SUPERFAMILY SSF50249 132 189 2.68E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 1.6E-96 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 SUPERFAMILY SSF50249 67 130 3.68E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 PANTHER PTHR30053:SF5 1 190 9.6E-134 T 22-04-2016 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 4.7E-14 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 Gene3D G3DSA:2.40.50.140 67 131 2.3E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 SMART SM01185 69 125 3.6E-14 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 SMART SM00841 133 188 8.3E-24 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 Gene3D G3DSA:2.40.50.140 132 189 1.9E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 SUPERFAMILY SSF50104 1 64 1.56E-10 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPO1284 4679b86f3f5e18ad0d0f2d97640b8a52 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 6.0E-16 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 YPO3239 7a614f4d224b88413122774aa74336d2 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.684 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO3239 7a614f4d224b88413122774aa74336d2 413 PANTHER PTHR30578:SF1 3 413 7.2E-270 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO3239 7a614f4d224b88413122774aa74336d2 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 6.5E-195 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO3239 7a614f4d224b88413122774aa74336d2 413 PANTHER PTHR30578 3 413 7.2E-270 T 22-04-2016 YPO3239 7a614f4d224b88413122774aa74336d2 413 PIRSF PIRSF016055 1 413 2.4E-198 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO3239 7a614f4d224b88413122774aa74336d2 413 Pfam PF03116 NQR2, RnfD, RnfE family 43 405 2.7E-107 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 YPO0114 abec03b1827b136ce102bd26deb0d38a 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.3E-57 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YPO0114 abec03b1827b136ce102bd26deb0d38a 105 SUPERFAMILY SSF47598 2 105 5.56E-57 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YPO0114 abec03b1827b136ce102bd26deb0d38a 105 Gene3D G3DSA:1.10.140.10 2 105 5.1E-64 T 22-04-2016 IPR023453 Methionine repressor MetJ domain YPO0114 abec03b1827b136ce102bd26deb0d38a 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 8.0E-49 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YPO0114 abec03b1827b136ce102bd26deb0d38a 105 Hamap MF_00744 Met repressor [metJ]. 1 105 39.926 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YPO0678 af9d6c7644445b29d75af4559d1832ac 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPO0678 af9d6c7644445b29d75af4559d1832ac 385 PANTHER PTHR11496 1 385 4.0E-246 T 22-04-2016 YPO0678 af9d6c7644445b29d75af4559d1832ac 385 PANTHER PTHR11496:SF65 1 385 4.0E-246 T 22-04-2016 YPO0678 af9d6c7644445b29d75af4559d1832ac 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 358 6.3E-90 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YPO0678 af9d6c7644445b29d75af4559d1832ac 385 Gene3D G3DSA:3.40.50.1970 1 182 4.9E-55 T 22-04-2016 YPO0678 af9d6c7644445b29d75af4559d1832ac 385 SUPERFAMILY SSF56796 1 384 1.22E-107 T 22-04-2016 YPO0678 af9d6c7644445b29d75af4559d1832ac 385 Gene3D G3DSA:1.20.1090.10 183 384 1.9E-52 T 22-04-2016 YPO0678 af9d6c7644445b29d75af4559d1832ac 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPO1372 c617b7a916cd54420a615b6801979b18 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 534 2.7E-156 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 YPO1372 c617b7a916cd54420a615b6801979b18 574 Pfam PF00005 ABC transporter 356 503 6.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1372 c617b7a916cd54420a615b6801979b18 574 SUPERFAMILY SSF90123 7 327 1.29E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1372 c617b7a916cd54420a615b6801979b18 574 Gene3D G3DSA:3.40.50.300 338 569 9.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1372 c617b7a916cd54420a615b6801979b18 574 Gene3D G3DSA:1.20.1560.10 7 322 1.3E-29 T 22-04-2016 YPO1372 c617b7a916cd54420a615b6801979b18 574 PANTHER PTHR24222:SF30 4 574 2.5E-275 T 22-04-2016 YPO1372 c617b7a916cd54420a615b6801979b18 574 SUPERFAMILY SSF52540 335 572 1.96E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1372 c617b7a916cd54420a615b6801979b18 574 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1372 c617b7a916cd54420a615b6801979b18 574 PANTHER PTHR24222 4 574 2.5E-275 T 22-04-2016 YPO1372 c617b7a916cd54420a615b6801979b18 574 SMART SM00382 365 550 4.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1372 c617b7a916cd54420a615b6801979b18 574 Pfam PF00664 ABC transporter transmembrane region 63 287 4.3E-9 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 161 4.5E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 PANTHER PTHR32552 1 676 0.0 T 22-04-2016 YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 Pfam PF00593 TonB dependent receptor 429 675 1.1E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 PANTHER PTHR32552:SF22 1 676 0.0 T 22-04-2016 YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 SUPERFAMILY SSF56935 44 676 5.13E-99 T 22-04-2016 YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 22-04-2016 IPR010916 TonB box, conserved site YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 Gene3D G3DSA:2.170.130.10 44 161 2.8E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 44 676 1.1E-198 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 Gene3D G3DSA:2.40.170.20 162 676 6.1E-74 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO0283 2cc7949643ce9a81dbb1687bb9f1f176 676 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 44 676 3.1E-157 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 Gene3D G3DSA:3.40.250.10 1 152 2.6E-46 T 22-04-2016 IPR001763 Rhodanese-like domain YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 SMART SM00450 7 133 1.4E-24 T 22-04-2016 IPR001763 Rhodanese-like domain YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 SMART SM00450 156 276 3.0E-19 T 22-04-2016 IPR001763 Rhodanese-like domain YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 ProSitePatterns PS00683 Rhodanese C-terminal signature. 260 270 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 ProSitePatterns PS00380 Rhodanese signature 1. 43 54 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 PANTHER PTHR11364 1 282 7.5E-120 T 22-04-2016 YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 SUPERFAMILY SSF52821 159 279 3.8E-33 T 22-04-2016 IPR001763 Rhodanese-like domain YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 Pfam PF00581 Rhodanese-like domain 158 272 5.8E-12 T 22-04-2016 IPR001763 Rhodanese-like domain YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 Pfam PF00581 Rhodanese-like domain 8 129 4.3E-17 T 22-04-2016 IPR001763 Rhodanese-like domain YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 Gene3D G3DSA:3.40.250.10 155 279 1.5E-39 T 22-04-2016 IPR001763 Rhodanese-like domain YPO1194 01432d94d2a8fadd13ebaa917a91e3fe 284 SUPERFAMILY SSF52821 1 152 3.4E-41 T 22-04-2016 IPR001763 Rhodanese-like domain YPO3913 e1de6f8b864938d0f314aecb320e1efa 215 Gene3D G3DSA:1.10.357.10 6 197 1.6E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPO3913 e1de6f8b864938d0f314aecb320e1efa 215 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 5 214 54.429 T 22-04-2016 IPR023764 Transcriptional repressor HTH, FabR YPO3913 e1de6f8b864938d0f314aecb320e1efa 215 PANTHER PTHR30055 3 210 8.8E-114 T 22-04-2016 YPO3913 e1de6f8b864938d0f314aecb320e1efa 215 PANTHER PTHR30055:SF39 3 210 8.8E-114 T 22-04-2016 YPO3913 e1de6f8b864938d0f314aecb320e1efa 215 SUPERFAMILY SSF46689 5 81 1.65E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3913 e1de6f8b864938d0f314aecb320e1efa 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 2.3E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO3050 2d3c10c28c0939f0c90b7546895d8a3a 362 Gene3D G3DSA:3.40.190.10 142 282 8.4E-57 T 22-04-2016 YPO3050 2d3c10c28c0939f0c90b7546895d8a3a 362 Pfam PF13416 Bacterial extracellular solute-binding protein 59 319 2.9E-22 T 22-04-2016 YPO3050 2d3c10c28c0939f0c90b7546895d8a3a 362 PANTHER PTHR30006:SF10 1 361 8.1E-155 T 22-04-2016 YPO3050 2d3c10c28c0939f0c90b7546895d8a3a 362 Gene3D G3DSA:3.40.190.10 4 141 6.7E-60 T 22-04-2016 YPO3050 2d3c10c28c0939f0c90b7546895d8a3a 362 Gene3D G3DSA:3.40.190.10 283 357 6.7E-60 T 22-04-2016 YPO3050 2d3c10c28c0939f0c90b7546895d8a3a 362 SUPERFAMILY SSF53850 40 339 4.43E-52 T 22-04-2016 YPO3050 2d3c10c28c0939f0c90b7546895d8a3a 362 PANTHER PTHR30006 1 361 8.1E-155 T 22-04-2016 YPO0058 90e898e94f58533fe189d8cc7a6d9aef 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 58.165 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 YPO0058 90e898e94f58533fe189d8cc7a6d9aef 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 9.1E-47 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO0058 90e898e94f58533fe189d8cc7a6d9aef 310 SUPERFAMILY SSF51735 1 306 4.79E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0058 90e898e94f58533fe189d8cc7a6d9aef 310 Gene3D G3DSA:3.40.50.720 2 171 1.9E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0058 90e898e94f58533fe189d8cc7a6d9aef 310 PANTHER PTHR10366 1 308 1.2E-129 T 22-04-2016 YPO0058 90e898e94f58533fe189d8cc7a6d9aef 310 PANTHER PTHR10366:SF469 1 308 1.2E-129 T 22-04-2016 YPO0058 90e898e94f58533fe189d8cc7a6d9aef 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 7.3E-136 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 YPO0058 90e898e94f58533fe189d8cc7a6d9aef 310 Gene3D G3DSA:3.90.25.10 172 290 1.9E-36 T 22-04-2016 YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 PANTHER PTHR32303:SF8 1 384 4.5E-181 T 22-04-2016 YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 PANTHER PTHR32303 1 384 4.5E-181 T 22-04-2016 YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 392 4.1E-135 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 SUPERFAMILY SSF50998 24 385 1.12E-77 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 Gene3D G3DSA:2.140.10.10 1 392 1.3E-76 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 Pfam PF13360 PQQ-like domain 78 320 1.5E-52 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.796 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 SMART SM00564 252 283 7.7E-6 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 SMART SM00564 330 362 2.3 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 SMART SM00564 65 96 0.13 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 SMART SM00564 290 321 770.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 SMART SM00564 115 147 0.089 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 SMART SM00564 201 232 24.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPO2876 5acabe47c03c76d8a7efdfa5391aba5c 393 SMART SM00564 156 187 2.8E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 86 104 1.5E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 125 142 1.5E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 211 236 1.5E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 143 165 1.5E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 166 193 1.5E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 63 85 1.5E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 194 210 1.5E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 1.5E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PRINTS PR01003 Flagellar assembly protein FliH signature 105 124 1.5E-73 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 Pfam PF02108 Flagellar assembly protein FliH 106 229 2.3E-39 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PANTHER PTHR34982 30 232 9.6E-66 T 22-04-2016 YPO1828 8a5229b1f95792c121f63e166c454b6f 238 PANTHER PTHR34982:SF1 30 232 9.6E-66 T 22-04-2016 YPO0032 b4d7c1cff6228b86062cd2569def1709 307 Pfam PF00583 Acetyltransferase (GNAT) family 50 122 2.4E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO0032 b4d7c1cff6228b86062cd2569def1709 307 Gene3D G3DSA:3.40.630.30 7 144 1.8E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO0032 b4d7c1cff6228b86062cd2569def1709 307 Gene3D G3DSA:3.10.129.10 145 298 1.5E-65 T 22-04-2016 IPR029069 HotDog domain YPO0032 b4d7c1cff6228b86062cd2569def1709 307 SUPERFAMILY SSF54637 155 297 3.43E-43 T 22-04-2016 IPR029069 HotDog domain YPO0032 b4d7c1cff6228b86062cd2569def1709 307 PANTHER PTHR23091 1 178 9.6E-100 T 22-04-2016 YPO0032 b4d7c1cff6228b86062cd2569def1709 307 SUPERFAMILY SSF55729 2 170 2.36E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO0032 b4d7c1cff6228b86062cd2569def1709 307 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 3.1E-49 T 22-04-2016 IPR012660 Thioesterase, putative YPO0032 b4d7c1cff6228b86062cd2569def1709 307 PANTHER PTHR23091:SF249 1 178 9.6E-100 T 22-04-2016 YPO0032 b4d7c1cff6228b86062cd2569def1709 307 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 2.0E-50 T 22-04-2016 IPR012660 Thioesterase, putative YPO0451 449987bab8083ed5588172ef1a434690 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 230 360 5.8E-23 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO0451 449987bab8083ed5588172ef1a434690 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 730 4.9E-35 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO0451 449987bab8083ed5588172ef1a434690 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 98 204 1.3E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO0451 449987bab8083ed5588172ef1a434690 908 Gene3D G3DSA:2.70.150.10 33 70 1.6E-42 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO0451 449987bab8083ed5588172ef1a434690 908 Gene3D G3DSA:2.70.150.10 124 238 1.6E-42 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO0451 449987bab8083ed5588172ef1a434690 908 SMART SM00831 18 91 7.0E-34 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YPO0451 449987bab8083ed5588172ef1a434690 908 Pfam PF00702 haloacid dehalogenase-like hydrolase 335 655 7.6E-24 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 Pfam PF00689 Cation transporting ATPase, C-terminus 726 897 1.6E-42 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal YPO0451 449987bab8083ed5588172ef1a434690 908 PANTHER PTHR24093 1 904 0.0 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 SUPERFAMILY SSF81653 128 238 5.36E-30 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 PANTHER PTHR24093:SF254 1 904 0.0 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 SUPERFAMILY SSF81665 18 129 5.23E-119 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 SUPERFAMILY SSF81665 239 333 5.23E-119 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 SUPERFAMILY SSF81665 691 901 5.23E-119 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 SUPERFAMILY SSF56784 337 357 7.5E-62 T 22-04-2016 IPR023214 HAD-like domain YPO0451 449987bab8083ed5588172ef1a434690 908 SUPERFAMILY SSF56784 495 744 7.5E-62 T 22-04-2016 IPR023214 HAD-like domain YPO0451 449987bab8083ed5588172ef1a434690 908 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 341 347 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YPO0451 449987bab8083ed5588172ef1a434690 908 Gene3D G3DSA:1.20.1110.10 610 898 3.7E-104 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YPO0451 449987bab8083ed5588172ef1a434690 908 Gene3D G3DSA:1.20.1110.10 71 123 3.7E-104 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YPO0451 449987bab8083ed5588172ef1a434690 908 Gene3D G3DSA:3.40.1110.10 329 547 2.2E-50 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPO0451 449987bab8083ed5588172ef1a434690 908 Pfam PF00690 Cation transporter/ATPase, N-terminus 19 85 2.8E-21 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 673 698 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 641 657 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 498 516 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 613 629 1.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YPO0451 449987bab8083ed5588172ef1a434690 908 SUPERFAMILY SSF81660 346 544 6.54E-46 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 176 190 1.3E-40 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 551 1.3E-40 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 572 1.3E-40 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 339 353 1.3E-40 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 677 1.3E-40 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 660 1.3E-40 T 22-04-2016 YPO0451 449987bab8083ed5588172ef1a434690 908 Pfam PF00122 E1-E2 ATPase 96 330 1.7E-66 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YPO0231 27f9ad9f09ec293cd83e76776f5acb21 118 Gene3D G3DSA:4.10.910.10 72 118 7.5E-26 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal YPO0231 27f9ad9f09ec293cd83e76776f5acb21 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO0231 27f9ad9f09ec293cd83e76776f5acb21 118 PIRSF PIRSF002134 1 118 6.0E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0231 27f9ad9f09ec293cd83e76776f5acb21 118 PANTHER PTHR10871 2 118 1.3E-67 T 22-04-2016 YPO0231 27f9ad9f09ec293cd83e76776f5acb21 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.1E-33 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0231 27f9ad9f09ec293cd83e76776f5acb21 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.6E-52 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0231 27f9ad9f09ec293cd83e76776f5acb21 118 Gene3D G3DSA:1.10.8.50 2 71 4.0E-28 T 22-04-2016 YPO0231 27f9ad9f09ec293cd83e76776f5acb21 118 SUPERFAMILY SSF46946 2 114 2.06E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 YPO0231 27f9ad9f09ec293cd83e76776f5acb21 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.787 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0190 019da2398b0e4993a0b975d22641d5df 183 PANTHER PTHR10204:SF42 6 183 9.7E-88 T 22-04-2016 YPO0190 019da2398b0e4993a0b975d22641d5df 183 SUPERFAMILY SSF52218 6 177 3.96E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO0190 019da2398b0e4993a0b975d22641d5df 183 Pfam PF02525 Flavodoxin-like fold 7 174 4.4E-40 T 22-04-2016 IPR003680 Flavodoxin-like fold YPO0190 019da2398b0e4993a0b975d22641d5df 183 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 183 49.544 T 22-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YPO0190 019da2398b0e4993a0b975d22641d5df 183 Gene3D G3DSA:3.40.50.360 7 177 1.4E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO0190 019da2398b0e4993a0b975d22641d5df 183 PANTHER PTHR10204 6 183 9.7E-88 T 22-04-2016 YPO1071 5d4dacb53db7ad6f68c76f01b9c9add5 271 PIRSF PIRSF002854 1 271 1.7E-104 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPO1071 5d4dacb53db7ad6f68c76f01b9c9add5 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 1.5E-144 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPO1071 5d4dacb53db7ad6f68c76f01b9c9add5 271 Gene3D G3DSA:3.40.190.10 30 162 8.3E-60 T 22-04-2016 YPO1071 5d4dacb53db7ad6f68c76f01b9c9add5 271 SUPERFAMILY SSF53850 33 271 2.42E-83 T 22-04-2016 YPO1071 5d4dacb53db7ad6f68c76f01b9c9add5 271 PANTHER PTHR30429 3 271 1.4E-157 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPO1071 5d4dacb53db7ad6f68c76f01b9c9add5 271 Pfam PF03180 NLPA lipoprotein 33 271 7.1E-99 T 22-04-2016 IPR004872 Lipoprotein NlpA family YPO1071 5d4dacb53db7ad6f68c76f01b9c9add5 271 PANTHER PTHR30429:SF1 3 271 1.4E-157 T 22-04-2016 YPO0043 d432d1fea33d6e4e5300c080fb7696a1 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 7.2E-44 T 22-04-2016 IPR013527 YicC-like, N-terminal YPO0043 d432d1fea33d6e4e5300c080fb7696a1 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.5E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 YPO0043 d432d1fea33d6e4e5300c080fb7696a1 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.9E-130 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 YPO0043 d432d1fea33d6e4e5300c080fb7696a1 287 PANTHER PTHR30636 1 287 4.3E-114 T 22-04-2016 YPO2793 19092aec4dc203788ccceb4f2197cb15 190 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 2.1E-60 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2793 19092aec4dc203788ccceb4f2197cb15 190 SUPERFAMILY SSF141452 26 161 6.8E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2793 19092aec4dc203788ccceb4f2197cb15 190 PANTHER PTHR34319 1 190 4.8E-90 T 22-04-2016 YPO2793 19092aec4dc203788ccceb4f2197cb15 190 Gene3D G3DSA:2.30.110.20 11 156 4.8E-21 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2793 19092aec4dc203788ccceb4f2197cb15 190 Pfam PF05638 Type VI secretion system effector, Hcp 28 143 7.5E-23 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2410 3491a9fe4a1d6d827de8fbe40d9db6cf 273 SUPERFAMILY SSF47454 173 230 6.28E-5 T 22-04-2016 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 YPO2410 3491a9fe4a1d6d827de8fbe40d9db6cf 273 PANTHER PTHR31756 1 273 4.6E-131 T 22-04-2016 YPO2410 3491a9fe4a1d6d827de8fbe40d9db6cf 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 2.1E-73 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 YPO2410 3491a9fe4a1d6d827de8fbe40d9db6cf 273 PANTHER PTHR31756:SF3 1 273 4.6E-131 T 22-04-2016 YPO2410 3491a9fe4a1d6d827de8fbe40d9db6cf 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 73.599 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 SUPERFAMILY SSF53383 17 440 8.77E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 PANTHER PTHR11773:SF1 1 959 0.0 T 22-04-2016 YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 958 25.392 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 SUPERFAMILY SSF53383 479 889 3.25E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 952 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 Pfam PF02347 Glycine cleavage system P-protein 477 739 1.2E-8 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 Pfam PF02347 Glycine cleavage system P-protein 16 440 5.9E-179 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 SUPERFAMILY SSF53383 931 953 3.25E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 PANTHER PTHR11773 1 959 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 Gene3D G3DSA:3.40.640.10 93 305 1.1E-13 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0905 547a8be9b36feee1f8d87c42c71af5b6 959 Gene3D G3DSA:3.40.640.10 504 778 5.3E-41 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO2391 6b1b5770bffe93761951315ac498032d 218 Pfam PF00677 Lumazine binding domain 100 185 1.7E-18 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO2391 6b1b5770bffe93761951315ac498032d 218 Pfam PF00677 Lumazine binding domain 3 87 2.8E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO2391 6b1b5770bffe93761951315ac498032d 218 SUPERFAMILY SSF63380 1 93 2.21E-28 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO2391 6b1b5770bffe93761951315ac498032d 218 Gene3D G3DSA:2.40.30.20 5 105 1.2E-32 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO2391 6b1b5770bffe93761951315ac498032d 218 Gene3D G3DSA:2.40.30.20 106 200 5.3E-27 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO2391 6b1b5770bffe93761951315ac498032d 218 PANTHER PTHR21098 1 217 3.2E-139 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO2391 6b1b5770bffe93761951315ac498032d 218 PANTHER PTHR21098:SF4 1 217 3.2E-139 T 22-04-2016 YPO2391 6b1b5770bffe93761951315ac498032d 218 SUPERFAMILY SSF63380 93 199 3.83E-32 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO2391 6b1b5770bffe93761951315ac498032d 218 PIRSF PIRSF000498 1 212 9.2E-75 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO2391 6b1b5770bffe93761951315ac498032d 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 3.9E-83 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO2015 ce6cdda323ba02b2089d00f6a92dd79f 207 SUPERFAMILY SSF89392 34 206 6.28E-56 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPO2015 ce6cdda323ba02b2089d00f6a92dd79f 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 30.098 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YPO2015 ce6cdda323ba02b2089d00f6a92dd79f 207 Gene3D G3DSA:2.50.20.10 15 206 9.7E-68 T 22-04-2016 YPO2015 ce6cdda323ba02b2089d00f6a92dd79f 207 PANTHER PTHR30634:SF11 1 207 1.2E-72 T 22-04-2016 YPO2015 ce6cdda323ba02b2089d00f6a92dd79f 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 8 205 1.3E-74 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YPO2015 ce6cdda323ba02b2089d00f6a92dd79f 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 1.0E-47 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YPO2015 ce6cdda323ba02b2089d00f6a92dd79f 207 PANTHER PTHR30634 1 207 1.2E-72 T 22-04-2016 YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 Pfam PF00005 ABC transporter 45 192 9.3E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 PANTHER PTHR24220 6 16 1.2E-172 T 22-04-2016 YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 PANTHER PTHR24220 41 292 1.2E-172 T 22-04-2016 YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 SUPERFAMILY SSF52540 43 272 4.99E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 SMART SM00382 53 242 1.1E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 Gene3D G3DSA:3.10.580.10 272 395 1.7E-21 T 22-04-2016 YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 Pfam PF00571 CBS domain 346 393 5.1E-5 T 22-04-2016 IPR000644 CBS domain YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 SUPERFAMILY SSF54631 276 396 6.19E-13 T 22-04-2016 YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 PANTHER PTHR24220:SF374 6 16 1.2E-172 T 22-04-2016 YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 PANTHER PTHR24220:SF374 41 292 1.2E-172 T 22-04-2016 YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 Gene3D G3DSA:3.40.50.300 5 264 4.4E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2647 1cb645ee0a8811482ca3ade6c47ac6a5 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 394 1.8E-172 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 PANTHER PTHR10168:SF85 4 81 7.9E-46 T 22-04-2016 YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 Gene3D G3DSA:3.40.30.10 4 81 1.2E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 PANTHER PTHR10168 4 81 7.9E-46 T 22-04-2016 YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 5.1E-50 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 Pfam PF00462 Glutaredoxin 4 69 1.7E-16 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 PRINTS PR00160 Glutaredoxin signature 3 21 4.5E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 PRINTS PR00160 Glutaredoxin signature 52 65 4.5E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 PRINTS PR00160 Glutaredoxin signature 66 79 4.5E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPO1327 b36cbd6ee036dff2759a3de2cd9d447d 87 SUPERFAMILY SSF52833 4 81 6.26E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 PANTHER PTHR11699 1 475 0.0 T 22-04-2016 YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 Gene3D G3DSA:3.40.605.10 16 271 4.1E-73 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 15 500 58.288 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 SUPERFAMILY SSF53720 13 469 2.09E-120 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 Gene3D G3DSA:3.40.309.10 272 462 3.5E-41 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 PANTHER PTHR11699:SF197 1 475 0.0 T 22-04-2016 YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 17 500 1.0E-263 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 YPO1964 b9c37fe670c8ef716d2de0942868dc40 505 Pfam PF00171 Aldehyde dehydrogenase family 28 472 8.9E-119 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPO1181 9694743e27b000b19a149e291a13345c 82 Pfam PF04226 Transglycosylase associated protein 33 81 1.9E-15 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 YPO1181 9694743e27b000b19a149e291a13345c 82 PANTHER PTHR33884 1 82 1.7E-37 T 22-04-2016 YPO1181 9694743e27b000b19a149e291a13345c 82 PANTHER PTHR33884:SF1 1 82 1.7E-37 T 22-04-2016 YPO0156 58b7ff28520bc9526a4d966676701a64 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 34.953 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 YPO0156 58b7ff28520bc9526a4d966676701a64 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 192 1.5E-36 T 22-04-2016 IPR023214 HAD-like domain YPO0156 58b7ff28520bc9526a4d966676701a64 232 SUPERFAMILY SSF56784 4 222 1.42E-60 T 22-04-2016 IPR023214 HAD-like domain YPO0156 58b7ff28520bc9526a4d966676701a64 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 221 3.5E-81 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 YPO0156 58b7ff28520bc9526a4d966676701a64 232 Gene3D G3DSA:3.40.50.1000 83 222 7.4E-44 T 22-04-2016 IPR023214 HAD-like domain YPO0156 58b7ff28520bc9526a4d966676701a64 232 Gene3D G3DSA:1.10.150.240 22 82 1.1E-24 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO0156 58b7ff28520bc9526a4d966676701a64 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 3.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0156 58b7ff28520bc9526a4d966676701a64 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 3.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0156 58b7ff28520bc9526a4d966676701a64 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 3.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0156 58b7ff28520bc9526a4d966676701a64 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 3.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0156 58b7ff28520bc9526a4d966676701a64 232 PANTHER PTHR18901 1 232 2.2E-88 T 22-04-2016 YPO0156 58b7ff28520bc9526a4d966676701a64 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 187 2.3E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0156 58b7ff28520bc9526a4d966676701a64 232 PANTHER PTHR18901:SF14 1 232 2.2E-88 T 22-04-2016 YPO0156 58b7ff28520bc9526a4d966676701a64 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 192 3.2E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO0289 e604c346a7af70b73720e9813384127d 319 PANTHER PTHR32308 6 319 4.8E-188 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YPO0289 e604c346a7af70b73720e9813384127d 319 PANTHER PTHR32308:SF3 6 319 4.8E-188 T 22-04-2016 YPO0289 e604c346a7af70b73720e9813384127d 319 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 6 300 4.4E-107 T 22-04-2016 YPO0289 e604c346a7af70b73720e9813384127d 319 Gene3D G3DSA:3.20.20.60 9 250 6.9E-32 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO0289 e604c346a7af70b73720e9813384127d 319 PIRSF PIRSF015582 1 310 3.0E-66 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YPO0289 e604c346a7af70b73720e9813384127d 319 SUPERFAMILY SSF51621 8 250 4.6E-29 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO0397 3e28e4c9e0b8ef2d82cb27eb8b32bbd8 384 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 4 186 7.8E-45 T 22-04-2016 IPR024537 Domain of unknown function DUF3322 YPO0397 3e28e4c9e0b8ef2d82cb27eb8b32bbd8 384 PIRSF PIRSF028408 1 384 1.9E-153 T 22-04-2016 IPR014544 Uncharacterised conserved protein UCP028408 YPO0397 3e28e4c9e0b8ef2d82cb27eb8b32bbd8 384 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 206 375 1.0E-45 T 22-04-2016 IPR024534 Domain of unknown function DUF2220 YPO1944 bd56aee6fb75eaeee8c5b33f3850279a 430 PANTHER PTHR30489 278 430 2.1E-137 T 22-04-2016 YPO1944 bd56aee6fb75eaeee8c5b33f3850279a 430 PANTHER PTHR30489 1 259 2.1E-137 T 22-04-2016 YPO1944 bd56aee6fb75eaeee8c5b33f3850279a 430 PANTHER PTHR30489:SF16 278 430 2.1E-137 T 22-04-2016 YPO1944 bd56aee6fb75eaeee8c5b33f3850279a 430 PANTHER PTHR30489:SF16 1 259 2.1E-137 T 22-04-2016 YPO1944 bd56aee6fb75eaeee8c5b33f3850279a 430 Pfam PF02687 FtsX-like permease family 310 422 1.4E-22 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPO0320 a9065623a555437f33290757e7e0479e 468 PANTHER PTHR30153 8 468 2.8E-225 T 22-04-2016 YPO0320 a9065623a555437f33290757e7e0479e 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 2.0E-113 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 YPO0320 a9065623a555437f33290757e7e0479e 468 Gene3D G3DSA:3.40.50.300 188 461 4.1E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0320 a9065623a555437f33290757e7e0479e 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 1.3E-174 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 YPO0320 a9065623a555437f33290757e7e0479e 468 SUPERFAMILY SSF52540 201 272 5.47E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0320 a9065623a555437f33290757e7e0479e 468 SUPERFAMILY SSF52540 299 452 5.47E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0320 a9065623a555437f33290757e7e0479e 468 SUPERFAMILY SSF48024 22 133 3.53E-38 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YPO0320 a9065623a555437f33290757e7e0479e 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.1E-36 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YPO0320 a9065623a555437f33290757e7e0479e 468 Gene3D G3DSA:1.10.860.10 24 126 2.6E-40 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPO0320 a9065623a555437f33290757e7e0479e 468 SMART SM00382 220 426 3.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2651 af45e980ff3a1632573fc7a9fed53953 78 SUPERFAMILY SSF52833 1 72 3.43E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2651 af45e980ff3a1632573fc7a9fed53953 78 Gene3D G3DSA:3.40.30.10 1 75 9.9E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2651 af45e980ff3a1632573fc7a9fed53953 78 PANTHER PTHR34386 1 75 8.5E-41 T 22-04-2016 YPO2651 af45e980ff3a1632573fc7a9fed53953 78 Pfam PF00462 Glutaredoxin 3 61 7.3E-15 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPO2651 af45e980ff3a1632573fc7a9fed53953 78 PANTHER PTHR34386:SF3 1 75 8.5E-41 T 22-04-2016 YPO2651 af45e980ff3a1632573fc7a9fed53953 78 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 6.4E-35 T 22-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 YPO2972 239e772252439e521e2217a3650883aa 223 PANTHER PTHR41164:SF1 1 223 9.9E-82 T 22-04-2016 YPO2972 239e772252439e521e2217a3650883aa 223 Pfam PF03783 Curli production assembly/transport component CsgG 43 221 4.9E-33 T 22-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 YPO2972 239e772252439e521e2217a3650883aa 223 SUPERFAMILY SSF52964 44 144 4.71E-9 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPO2972 239e772252439e521e2217a3650883aa 223 PANTHER PTHR41164 1 223 9.9E-82 T 22-04-2016 YPO2972 239e772252439e521e2217a3650883aa 223 Gene3D G3DSA:3.40.50.10070 46 140 5.9E-6 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YPO3387 05ca593d44188ecfc850e31a12e1ca05 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 5.5E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 YPO3387 05ca593d44188ecfc850e31a12e1ca05 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site YPO3387 05ca593d44188ecfc850e31a12e1ca05 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 3.0E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO3387 05ca593d44188ecfc850e31a12e1ca05 114 Gene3D G3DSA:2.60.300.12 9 104 9.6E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO3387 05ca593d44188ecfc850e31a12e1ca05 114 SUPERFAMILY SSF89360 8 103 7.06E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO3387 05ca593d44188ecfc850e31a12e1ca05 114 PANTHER PTHR10072 9 114 3.6E-49 T 22-04-2016 YPO3387 05ca593d44188ecfc850e31a12e1ca05 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.686 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 YPO0945 8b3a22e20e811b07d6592ce4ca976ebb 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.278 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YPO0945 8b3a22e20e811b07d6592ce4ca976ebb 197 PANTHER PTHR11067:SF9 1 197 1.7E-90 T 22-04-2016 YPO0945 8b3a22e20e811b07d6592ce4ca976ebb 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.8E-67 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YPO0945 8b3a22e20e811b07d6592ce4ca976ebb 197 PANTHER PTHR11067 1 197 1.7E-90 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YPO0945 8b3a22e20e811b07d6592ce4ca976ebb 197 Gene3D G3DSA:3.90.950.10 1 196 3.3E-83 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPO0945 8b3a22e20e811b07d6592ce4ca976ebb 197 SUPERFAMILY SSF52972 1 195 1.44E-74 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YPO0945 8b3a22e20e811b07d6592ce4ca976ebb 197 Pfam PF01725 Ham1 family 4 191 7.9E-56 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 5.8E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 PRINTS PR00139 Asparaginase/glutaminase family signature 279 297 5.8E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 5.8E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 SMART SM00870 25 339 2.8E-139 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 20 345 2.9E-148 T 22-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 PIRSF PIRSF500176 22 345 2.7E-81 T 22-04-2016 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 Gene3D G3DSA:3.40.50.1170 23 219 1.6E-71 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 Pfam PF00710 Asparaginase, N-terminal 25 215 5.1E-61 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 SUPERFAMILY SSF53774 23 344 8.64E-107 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 PANTHER PTHR11707:SF29 23 342 1.6E-103 T 22-04-2016 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 Gene3D G3DSA:3.40.50.40 232 343 1.5E-39 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 PIRSF PIRSF001220 21 345 3.6E-93 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 YPO1386 919b4345fbc04b413a6a8a71db5226e4 345 PANTHER PTHR11707 23 342 1.6E-103 T 22-04-2016 YPO1402 3845339e0a773103043f7a435fcfdd4b 261 SUPERFAMILY SSF53335 4 255 1.37E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1402 3845339e0a773103043f7a435fcfdd4b 261 Gene3D G3DSA:3.40.50.150 5 234 4.0E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1402 3845339e0a773103043f7a435fcfdd4b 261 PANTHER PTHR10108 1 222 2.4E-46 T 22-04-2016 YPO1402 3845339e0a773103043f7a435fcfdd4b 261 PANTHER PTHR10108:SF919 1 222 2.4E-46 T 22-04-2016 YPO1402 3845339e0a773103043f7a435fcfdd4b 261 Pfam PF13847 Methyltransferase domain 46 148 5.7E-19 T 22-04-2016 IPR025714 Methyltransferase domain YPO2548 4cae8759424fe3d9adb72cf71209af88 180 Gene3D G3DSA:3.30.70.20 30 117 1.0E-18 T 22-04-2016 YPO2548 4cae8759424fe3d9adb72cf71209af88 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 4.1E-52 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 YPO2548 4cae8759424fe3d9adb72cf71209af88 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 4.6E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2548 4cae8759424fe3d9adb72cf71209af88 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 147 27.161 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 YPO2548 4cae8759424fe3d9adb72cf71209af88 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2548 4cae8759424fe3d9adb72cf71209af88 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2548 4cae8759424fe3d9adb72cf71209af88 180 PANTHER PTHR10849 8 180 1.7E-84 T 22-04-2016 YPO2548 4cae8759424fe3d9adb72cf71209af88 180 PANTHER PTHR10849:SF13 8 180 1.7E-84 T 22-04-2016 YPO2548 4cae8759424fe3d9adb72cf71209af88 180 SUPERFAMILY SSF54862 33 156 4.06E-29 T 22-04-2016 YPO1190 f505e0ea49fcb248fdc5d5f643daf8dd 278 Gene3D G3DSA:3.40.50.300 34 275 1.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1190 f505e0ea49fcb248fdc5d5f643daf8dd 278 SUPERFAMILY SSF52540 36 276 2.44E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1190 f505e0ea49fcb248fdc5d5f643daf8dd 278 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 37 278 3.8E-112 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YPO1190 f505e0ea49fcb248fdc5d5f643daf8dd 278 PANTHER PTHR24220:SF366 39 278 2.1E-148 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YPO1190 f505e0ea49fcb248fdc5d5f643daf8dd 278 Pfam PF00005 ABC transporter 53 207 1.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1190 f505e0ea49fcb248fdc5d5f643daf8dd 278 PANTHER PTHR24220 39 278 2.1E-148 T 22-04-2016 YPO1190 f505e0ea49fcb248fdc5d5f643daf8dd 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 255 277 7.6E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPO1935 64760a0ab26dc15767454cdde1024c2c 199 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 198 2.3E-102 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO1935 64760a0ab26dc15767454cdde1024c2c 199 PIRSF PIRSF006102 1 199 4.4E-56 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO1935 64760a0ab26dc15767454cdde1024c2c 199 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 197 5.4E-52 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO1935 64760a0ab26dc15767454cdde1024c2c 199 PANTHER PTHR30335:SF1 3 199 1.4E-139 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO1935 64760a0ab26dc15767454cdde1024c2c 199 PANTHER PTHR30335 3 199 1.4E-139 T 22-04-2016 YPO1935 64760a0ab26dc15767454cdde1024c2c 199 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 2 199 28.713 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO3146 24ca6b4e34def4dc71620dabe055675a 153 SUPERFAMILY SSF54909 62 151 1.27E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO3146 24ca6b4e34def4dc71620dabe055675a 153 SUPERFAMILY SSF46785 1 61 1.63E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3146 24ca6b4e34def4dc71620dabe055675a 153 PANTHER PTHR30154:SF17 1 151 1.0E-103 T 22-04-2016 YPO3146 24ca6b4e34def4dc71620dabe055675a 153 SMART SM00344 2 111 4.8E-38 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YPO3146 24ca6b4e34def4dc71620dabe055675a 153 Gene3D G3DSA:1.10.10.10 3 54 2.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3146 24ca6b4e34def4dc71620dabe055675a 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 6.0E-16 T 22-04-2016 YPO3146 24ca6b4e34def4dc71620dabe055675a 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.0E-21 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO3146 24ca6b4e34def4dc71620dabe055675a 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 8.3E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO3146 24ca6b4e34def4dc71620dabe055675a 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 8.3E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YPO3146 24ca6b4e34def4dc71620dabe055675a 153 Gene3D G3DSA:3.30.70.920 55 139 2.1E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO3146 24ca6b4e34def4dc71620dabe055675a 153 PANTHER PTHR30154 1 151 1.0E-103 T 22-04-2016 YPO0327 c18d17044bf384fa56004b2706f5f0b9 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 1.4E-171 T 22-04-2016 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77|UniPathway: UPA00563 YPO0327 c18d17044bf384fa56004b2706f5f0b9 382 SUPERFAMILY SSF56796 3 380 3.4E-121 T 22-04-2016 YPO0327 c18d17044bf384fa56004b2706f5f0b9 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPO0327 c18d17044bf384fa56004b2706f5f0b9 382 Gene3D G3DSA:1.20.1090.10 184 382 1.1E-71 T 22-04-2016 YPO0327 c18d17044bf384fa56004b2706f5f0b9 382 Gene3D G3DSA:3.40.50.1970 2 183 1.8E-55 T 22-04-2016 YPO0327 c18d17044bf384fa56004b2706f5f0b9 382 PANTHER PTHR11496:SF74 1 382 3.1E-241 T 22-04-2016 YPO0327 c18d17044bf384fa56004b2706f5f0b9 382 PANTHER PTHR11496 1 382 3.1E-241 T 22-04-2016 YPO0327 c18d17044bf384fa56004b2706f5f0b9 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 1.7E-116 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YPO0327 c18d17044bf384fa56004b2706f5f0b9 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.558 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.2E-220 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184:SF34 102 141 2.7E-199 T 22-04-2016 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184:SF34 11 51 2.7E-199 T 22-04-2016 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184:SF34 160 418 2.7E-199 T 22-04-2016 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 SUPERFAMILY SSF52540 90 371 2.66E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 SUPERFAMILY SSF68912 1 46 6.67E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 Gene3D G3DSA:1.10.720.10 1 47 9.7E-22 T 22-04-2016 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 SMART SM00357 52 118 2.0E-18 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 SMART SM00959 5 47 8.6E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 Gene3D G3DSA:2.40.50.140 49 117 8.5E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.1E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.9E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184 102 141 2.7E-199 T 22-04-2016 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184 11 51 2.7E-199 T 22-04-2016 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 PANTHER PTHR15184 160 418 2.7E-199 T 22-04-2016 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 SMART SM00382 170 355 2.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 SUPERFAMILY SSF50249 48 125 5.57E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.8E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 YPO3867 4c8853c8c64185b14d6bddccc600c3b6 419 Gene3D G3DSA:3.40.50.300 132 418 5.8E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0934 69487175222925c1e6fd2538458f23a8 243 PANTHER PTHR30027:SF3 1 243 1.4E-102 T 22-04-2016 YPO0934 69487175222925c1e6fd2538458f23a8 243 SUPERFAMILY SSF88697 2 70 1.71E-17 T 22-04-2016 IPR015947 PUA-like domain YPO0934 69487175222925c1e6fd2538458f23a8 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 6.7E-87 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0934 69487175222925c1e6fd2538458f23a8 243 SUPERFAMILY SSF75217 75 242 1.62E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPO0934 69487175222925c1e6fd2538458f23a8 243 PANTHER PTHR30027 1 243 1.4E-102 T 22-04-2016 YPO0934 69487175222925c1e6fd2538458f23a8 243 Gene3D G3DSA:3.40.1280.10 75 242 3.1E-57 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0934 69487175222925c1e6fd2538458f23a8 243 Pfam PF04452 RNA methyltransferase 19 236 5.8E-73 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0934 69487175222925c1e6fd2538458f23a8 243 PIRSF PIRSF015601 2 242 9.8E-54 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO0934 69487175222925c1e6fd2538458f23a8 243 Gene3D G3DSA:2.40.240.20 1 70 7.2E-27 T 22-04-2016 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.913 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:1.10.1390.10 507 548 4.8E-22 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:3.40.50.10490 8 98 5.7E-149 T 22-04-2016 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:3.40.50.10490 293 506 5.7E-149 T 22-04-2016 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 SUPERFAMILY SSF53697 5 547 1.36E-227 T 22-04-2016 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 Gene3D G3DSA:3.40.50.10490 99 291 9.0E-91 T 22-04-2016 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 PANTHER PTHR11469:SF11 1 548 0.0 T 22-04-2016 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 PANTHER PTHR11469 1 548 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 Pfam PF00342 Phosphoglucose isomerase 52 541 1.7E-257 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO3718 7e85b9c69511f42bfd8ead03ea89bd34 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 3.6E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 PANTHER PTHR10160 1 508 0.0 T 22-04-2016 YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 SMART SM01002 146 311 8.5E-86 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 SMART SM01003 4 137 5.7E-77 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 PIRSF PIRSF000203 1 507 5.8E-280 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.0E-75 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 Gene3D G3DSA:3.40.50.720 174 199 2.5E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 508 1.1E-292 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 425 507 9.7E-36 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.0E-52 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 SUPERFAMILY SSF52283 1 168 1.11E-58 T 22-04-2016 YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 Gene3D G3DSA:3.40.50.1770 2 173 2.3E-74 T 22-04-2016 YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 SUPERFAMILY SSF51735 137 317 3.01E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2303 3cf4c689a7155d0a46bf7e4c683db18b 508 Gene3D G3DSA:3.40.50.1770 200 371 2.8E-48 T 22-04-2016 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 SUPERFAMILY SSF48452 109 279 3.6E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 SMART SM00028 282 315 350.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 SMART SM00028 107 140 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 SMART SM00028 214 247 0.61 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 SMART SM00028 69 102 64.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 SMART SM00028 180 213 40.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 Pfam PF13176 Tetratricopeptide repeat 71 98 0.03 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.84 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 Pfam PF14559 Tetratricopeptide repeat 191 246 1.7E-5 T 22-04-2016 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 SUPERFAMILY SSF48452 38 137 5.69E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 PANTHER PTHR23083 8 348 1.2E-43 T 22-04-2016 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 Gene3D G3DSA:1.25.40.10 232 322 1.3E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 Gene3D G3DSA:1.25.40.10 112 231 1.6E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2225 f583178a63d92b9e1bf58a6a1317d033 389 Gene3D G3DSA:1.25.40.10 46 94 3.0E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1999 9f6a98977db54dc606548faa5d49e190 140 PANTHER PTHR33570 22 140 2.4E-70 T 22-04-2016 YPO1999 9f6a98977db54dc606548faa5d49e190 140 SUPERFAMILY SSF69118 38 138 1.44E-30 T 22-04-2016 IPR029032 AhpD-like YPO1999 9f6a98977db54dc606548faa5d49e190 140 PANTHER PTHR33570:SF1 22 140 2.4E-70 T 22-04-2016 YPO1999 9f6a98977db54dc606548faa5d49e190 140 Gene3D G3DSA:1.20.1290.10 35 139 4.1E-27 T 22-04-2016 IPR029032 AhpD-like YPO1999 9f6a98977db54dc606548faa5d49e190 140 Pfam PF02627 Carboxymuconolactone decarboxylase family 50 134 2.5E-22 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YPO0915 39e4491dab8dbdcaafabf48cef276706 218 Gene3D G3DSA:3.40.50.1360 1 136 4.7E-59 T 22-04-2016 YPO0915 39e4491dab8dbdcaafabf48cef276706 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.3E-57 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO0915 39e4491dab8dbdcaafabf48cef276706 218 PANTHER PTHR11934:SF11 1 217 2.0E-149 T 22-04-2016 YPO0915 39e4491dab8dbdcaafabf48cef276706 218 SUPERFAMILY SSF100950 1 146 2.56E-48 T 22-04-2016 YPO0915 39e4491dab8dbdcaafabf48cef276706 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.577 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO0915 39e4491dab8dbdcaafabf48cef276706 218 SUPERFAMILY SSF75445 127 198 2.49E-23 T 22-04-2016 YPO0915 39e4491dab8dbdcaafabf48cef276706 218 Gene3D G3DSA:3.30.70.260 137 196 1.4E-27 T 22-04-2016 YPO0915 39e4491dab8dbdcaafabf48cef276706 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 4.0E-69 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO0915 39e4491dab8dbdcaafabf48cef276706 218 PANTHER PTHR11934 1 217 2.0E-149 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO0014 de3cbfafce235944bb90a6e7d18fa870 328 PANTHER PTHR39573 2 328 1.1E-199 T 22-04-2016 YPO0014 de3cbfafce235944bb90a6e7d18fa870 328 SUPERFAMILY SSF56112 6 327 6.85E-90 T 22-04-2016 IPR011009 Protein kinase-like domain YPO0014 de3cbfafce235944bb90a6e7d18fa870 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.178 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YPO0014 de3cbfafce235944bb90a6e7d18fa870 328 PANTHER PTHR39573:SF1 2 328 1.1E-199 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YPO0014 de3cbfafce235944bb90a6e7d18fa870 328 Gene3D G3DSA:3.30.200.20 36 106 4.5E-4 T 22-04-2016 YPO0014 de3cbfafce235944bb90a6e7d18fa870 328 Pfam PF01636 Phosphotransferase enzyme family 33 256 2.3E-46 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase YPO0014 de3cbfafce235944bb90a6e7d18fa870 328 Gene3D G3DSA:3.90.1200.10 107 325 3.4E-47 T 22-04-2016 YPO1948 d5af8e752915b3088c342ffc3b88c617 103 SUPERFAMILY SSF46626 7 98 2.4E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO1948 d5af8e752915b3088c342ffc3b88c617 103 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 19 92 5.3E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO1948 d5af8e752915b3088c342ffc3b88c617 103 Gene3D G3DSA:1.10.760.10 17 99 8.5E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 Gene3D G3DSA:3.40.710.10 232 475 3.0E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 26 473 2.9E-165 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 291 313 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 429 442 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 8.4E-39 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 51 452 9.7E-170 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 SUPERFAMILY SSF56601 28 479 2.54E-104 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 PANTHER PTHR30023:SF0 13 478 3.1E-143 T 22-04-2016 YPO3506 4fb551aaa0853fb8d0ad4b325d027ca3 482 PANTHER PTHR30023 13 478 3.1E-143 T 22-04-2016 YPO3452 2f12514e60ce1e8ca2add5d877b4c481 292 PANTHER PTHR24220 7 55 7.5E-113 T 22-04-2016 YPO3452 2f12514e60ce1e8ca2add5d877b4c481 292 PANTHER PTHR24220 74 267 7.5E-113 T 22-04-2016 YPO3452 2f12514e60ce1e8ca2add5d877b4c481 292 Pfam PF00005 ABC transporter 22 191 3.0E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3452 2f12514e60ce1e8ca2add5d877b4c481 292 PANTHER PTHR24220:SF442 7 55 7.5E-113 T 22-04-2016 YPO3452 2f12514e60ce1e8ca2add5d877b4c481 292 PANTHER PTHR24220:SF442 74 267 7.5E-113 T 22-04-2016 YPO3452 2f12514e60ce1e8ca2add5d877b4c481 292 Gene3D G3DSA:3.40.50.300 5 261 5.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3452 2f12514e60ce1e8ca2add5d877b4c481 292 SMART SM00382 29 241 5.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3452 2f12514e60ce1e8ca2add5d877b4c481 292 SUPERFAMILY SSF52540 10 245 1.16E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3081 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 Pfam PF00106 short chain dehydrogenase 3 191 2.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0064 T 22-04-2016 YPO3081 4f97295b59848490394b745bd61fa45d 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO3081 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 3.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 PANTHER PTHR24322 146 178 3.3E-112 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 PANTHER PTHR24322 7 130 3.3E-112 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 4f97295b59848490394b745bd61fa45d 258 Gene3D G3DSA:3.40.50.720 2 237 2.3E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3081 4f97295b59848490394b745bd61fa45d 258 PANTHER PTHR24322:SF463 146 178 3.3E-112 T 22-04-2016 YPO3081 4f97295b59848490394b745bd61fa45d 258 PANTHER PTHR24322:SF463 7 130 3.3E-112 T 22-04-2016 YPO3081 4f97295b59848490394b745bd61fa45d 258 SUPERFAMILY SSF51735 3 254 1.58E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO4061 f1bd1488ff5931b279c69926a564d05b 207 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 202 1.4E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 SUPERFAMILY SSF46609 1 90 3.27E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 Gene3D G3DSA:1.10.287.990 20 90 7.6E-32 T 22-04-2016 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.7E-31 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 SUPERFAMILY SSF54719 95 206 3.93E-45 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 PANTHER PTHR11404 1 207 3.9E-108 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO4061 f1bd1488ff5931b279c69926a564d05b 207 PIRSF PIRSF000349 1 207 6.4E-80 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO0425 8b5014c7cc458979d9e0c77f7ad7b652 390 SMART SM00267 209 379 2.2E-50 T 22-04-2016 IPR000160 GGDEF domain YPO0425 8b5014c7cc458979d9e0c77f7ad7b652 390 PANTHER PTHR10799 250 382 2.0E-20 T 22-04-2016 YPO0425 8b5014c7cc458979d9e0c77f7ad7b652 390 PANTHER PTHR10799:SF750 250 382 2.0E-20 T 22-04-2016 YPO0425 8b5014c7cc458979d9e0c77f7ad7b652 390 Gene3D G3DSA:3.30.70.270 222 384 5.3E-48 T 22-04-2016 YPO0425 8b5014c7cc458979d9e0c77f7ad7b652 390 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 379 7.7E-44 T 22-04-2016 IPR000160 GGDEF domain YPO0425 8b5014c7cc458979d9e0c77f7ad7b652 390 SUPERFAMILY SSF55073 225 380 1.02E-42 T 22-04-2016 IPR029787 Nucleotide cyclase YPO0425 8b5014c7cc458979d9e0c77f7ad7b652 390 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 375 2.5E-45 T 22-04-2016 IPR000160 GGDEF domain YPO1584 958416d3f0ab7deddff502417059079d 73 Pfam PF13991 BssS protein family 11 73 2.5E-35 T 22-04-2016 IPR025730 Biofilm regulator BssS YPO1584 958416d3f0ab7deddff502417059079d 73 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 73 2.0E-36 T 22-04-2016 IPR025730 Biofilm regulator BssS YPO0354 58cd7022ddf1a6e46315783910d450ef 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.817 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 SUPERFAMILY SSF50249 67 128 2.61E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0354 58cd7022ddf1a6e46315783910d450ef 188 Gene3D G3DSA:2.40.50.140 130 187 8.1E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0354 58cd7022ddf1a6e46315783910d450ef 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 5.5E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 Gene3D G3DSA:2.40.50.140 66 129 2.1E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0354 58cd7022ddf1a6e46315783910d450ef 188 SMART SM00841 131 186 9.5E-33 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 SUPERFAMILY SSF50104 6 64 5.78E-18 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPO0354 58cd7022ddf1a6e46315783910d450ef 188 SMART SM01185 69 123 2.3E-25 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 Gene3D G3DSA:2.30.30.30 6 65 9.0E-26 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 SUPERFAMILY SSF50249 130 187 1.25E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0354 58cd7022ddf1a6e46315783910d450ef 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 62 7.5E-24 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 PIRSF PIRSF005901 2 188 3.1E-66 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.8E-76 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 PANTHER PTHR30053 1 188 4.2E-95 T 22-04-2016 YPO0354 58cd7022ddf1a6e46315783910d450ef 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 5.1E-26 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YPO0790 c1d1882fe799214596cdfb72a59c4e5e 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.2E-74 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO0790 c1d1882fe799214596cdfb72a59c4e5e 346 PANTHER PTHR11732 1 139 5.7E-219 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPO0790 c1d1882fe799214596cdfb72a59c4e5e 346 PANTHER PTHR11732 157 346 5.7E-219 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPO0790 c1d1882fe799214596cdfb72a59c4e5e 346 SUPERFAMILY SSF51430 1 344 6.29E-108 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO0790 c1d1882fe799214596cdfb72a59c4e5e 346 Gene3D G3DSA:3.20.20.100 1 343 7.3E-105 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO0790 c1d1882fe799214596cdfb72a59c4e5e 346 PANTHER PTHR11732:SF112 1 139 5.7E-219 T 22-04-2016 YPO0790 c1d1882fe799214596cdfb72a59c4e5e 346 PANTHER PTHR11732:SF112 157 346 5.7E-219 T 22-04-2016 YPO1212 931fc4065e182ec1929e0a8980ba1c14 85 SUPERFAMILY SSF54292 4 85 2.36E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO1212 931fc4065e182ec1929e0a8980ba1c14 85 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 77 1.1E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO1212 931fc4065e182ec1929e0a8980ba1c14 85 Gene3D G3DSA:3.10.20.30 4 84 7.4E-19 T 22-04-2016 IPR012675 Beta-grasp domain YPO1212 931fc4065e182ec1929e0a8980ba1c14 85 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPO2246 6f80aede1f5521bfa77f167c29dcd81a 193 PANTHER PTHR30335 2 193 1.4E-133 T 22-04-2016 YPO2246 6f80aede1f5521bfa77f167c29dcd81a 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.9E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO2246 6f80aede1f5521bfa77f167c29dcd81a 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.463 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 YPO2246 6f80aede1f5521bfa77f167c29dcd81a 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.1E-90 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 YPO2246 6f80aede1f5521bfa77f167c29dcd81a 193 PANTHER PTHR30335:SF0 2 193 1.4E-133 T 22-04-2016 YPO2246 6f80aede1f5521bfa77f167c29dcd81a 193 PIRSF PIRSF006102 1 193 3.1E-62 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO2921 159c1d6662e43285292fecdead849e66 1296 Gene3D G3DSA:3.30.1330.10 210 420 2.2E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPO2921 159c1d6662e43285292fecdead849e66 1296 Gene3D G3DSA:3.30.1330.10 645 809 4.1E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPO2921 159c1d6662e43285292fecdead849e66 1296 PANTHER PTHR10099 1 1296 0.0 T 22-04-2016 YPO2921 159c1d6662e43285292fecdead849e66 1296 SUPERFAMILY SSF55326 220 427 1.15E-63 T 22-04-2016 YPO2921 159c1d6662e43285292fecdead849e66 1296 SUPERFAMILY SSF82697 1 151 9.42E-52 T 22-04-2016 YPO2921 159c1d6662e43285292fecdead849e66 1296 Gene3D G3DSA:3.40.50.880 1041 1264 2.1E-10 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO2921 159c1d6662e43285292fecdead849e66 1296 SUPERFAMILY SSF56042 822 1033 2.84E-54 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2921 159c1d6662e43285292fecdead849e66 1296 SUPERFAMILY SSF52317 1036 1294 7.92E-97 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO2921 159c1d6662e43285292fecdead849e66 1296 PANTHER PTHR10099:SF5 1 1296 0.0 T 22-04-2016 YPO2921 159c1d6662e43285292fecdead849e66 1296 SUPERFAMILY SSF109736 154 219 2.22E-21 T 22-04-2016 YPO2921 159c1d6662e43285292fecdead849e66 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 5.2E-103 T 22-04-2016 YPO2921 159c1d6662e43285292fecdead849e66 1296 SUPERFAMILY SSF55326 618 815 3.66E-66 T 22-04-2016 YPO2921 159c1d6662e43285292fecdead849e66 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.39 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO2921 159c1d6662e43285292fecdead849e66 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO2921 159c1d6662e43285292fecdead849e66 1296 SMART SM01211 1040 1295 1.6E-155 T 22-04-2016 YPO2921 159c1d6662e43285292fecdead849e66 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 584 5.8E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2921 159c1d6662e43285292fecdead849e66 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 966 4.7E-13 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2921 159c1d6662e43285292fecdead849e66 1296 SUPERFAMILY SSF56042 430 614 1.09E-52 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO1745 1d5021f260a783fd26ca8ae6972b72e1 38 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 3.8E-29 T 22-04-2016 IPR019672 Protein of unknown function DUF2627 YPO0015 763ac468b98a4d2f5c9db4f860b44e84 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPO0015 763ac468b98a4d2f5c9db4f860b44e84 207 PANTHER PTHR35891:SF2 1 207 2.2E-102 T 22-04-2016 YPO0015 763ac468b98a4d2f5c9db4f860b44e84 207 Pfam PF01323 DSBA-like thioredoxin domain 40 194 1.9E-28 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 YPO0015 763ac468b98a4d2f5c9db4f860b44e84 207 PANTHER PTHR35891 1 207 2.2E-102 T 22-04-2016 YPO0015 763ac468b98a4d2f5c9db4f860b44e84 207 PIRSF PIRSF001488 1 207 1.3E-91 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YPO0015 763ac468b98a4d2f5c9db4f860b44e84 207 SUPERFAMILY SSF52833 20 203 3.18E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0015 763ac468b98a4d2f5c9db4f860b44e84 207 Gene3D G3DSA:3.40.30.10 120 204 8.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0015 763ac468b98a4d2f5c9db4f860b44e84 207 Gene3D G3DSA:3.40.30.10 1 118 3.6E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3426 bb536271f3cdcf0df7913888e98be54b 512 PANTHER PTHR30258:SF1 19 512 7.6E-221 T 22-04-2016 YPO3426 bb536271f3cdcf0df7913888e98be54b 512 Gene3D G3DSA:3.30.450.90 109 234 4.9E-48 T 22-04-2016 YPO3426 bb536271f3cdcf0df7913888e98be54b 512 Pfam PF00437 Type II/IV secretion system protein 140 400 7.3E-81 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPO3426 bb536271f3cdcf0df7913888e98be54b 512 PANTHER PTHR30258 19 512 7.6E-221 T 22-04-2016 YPO3426 bb536271f3cdcf0df7913888e98be54b 512 Gene3D G3DSA:3.40.50.300 239 503 1.3E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3426 bb536271f3cdcf0df7913888e98be54b 512 SUPERFAMILY SSF52540 110 502 2.45E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3426 bb536271f3cdcf0df7913888e98be54b 512 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 328 342 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPO1392 386e11b32d903483c0f9c22256234941 557 SUPERFAMILY SSF50249 255 371 1.37E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 SUPERFAMILY SSF50249 104 185 4.25E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 SMART SM00316 449 520 2.9E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO1392 386e11b32d903483c0f9c22256234941 557 SMART SM00316 190 260 2.8E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO1392 386e11b32d903483c0f9c22256234941 557 SMART SM00316 19 87 5.0E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO1392 386e11b32d903483c0f9c22256234941 557 SMART SM00316 362 434 1.8E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO1392 386e11b32d903483c0f9c22256234941 557 SMART SM00316 275 347 6.5E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO1392 386e11b32d903483c0f9c22256234941 557 SMART SM00316 103 171 8.1E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO1392 386e11b32d903483c0f9c22256234941 557 SUPERFAMILY SSF50249 363 444 4.77E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.0E-235 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 Gene3D G3DSA:2.40.50.140 21 101 8.6E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 Gene3D G3DSA:2.40.50.140 192 279 9.3E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 Gene3D G3DSA:2.40.50.140 280 362 4.1E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO1392 386e11b32d903483c0f9c22256234941 557 Gene3D G3DSA:2.40.50.140 102 172 3.9E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 Gene3D G3DSA:2.40.50.140 444 521 3.3E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 Pfam PF00575 S1 RNA binding domain 103 171 6.7E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO1392 386e11b32d903483c0f9c22256234941 557 Pfam PF00575 S1 RNA binding domain 449 520 1.7E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO1392 386e11b32d903483c0f9c22256234941 557 Pfam PF00575 S1 RNA binding domain 279 347 2.7E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO1392 386e11b32d903483c0f9c22256234941 557 Pfam PF00575 S1 RNA binding domain 20 78 6.6E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO1392 386e11b32d903483c0f9c22256234941 557 Pfam PF00575 S1 RNA binding domain 361 434 3.2E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO1392 386e11b32d903483c0f9c22256234941 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO1392 386e11b32d903483c0f9c22256234941 557 SUPERFAMILY SSF50249 189 275 7.46E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 PANTHER PTHR10724:SF6 1 514 1.6E-277 T 22-04-2016 YPO1392 386e11b32d903483c0f9c22256234941 557 Gene3D G3DSA:2.40.50.140 363 443 6.4E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 PANTHER PTHR10724 1 514 1.6E-277 T 22-04-2016 YPO1392 386e11b32d903483c0f9c22256234941 557 SUPERFAMILY SSF50249 429 533 2.91E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 SUPERFAMILY SSF50249 1 112 4.52E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1392 386e11b32d903483c0f9c22256234941 557 PIRSF PIRSF002111 1 534 6.6E-217 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YPO0222 138f8966827b522aff2eefaac3f66634 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.604 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0222 138f8966827b522aff2eefaac3f66634 179 Gene3D G3DSA:3.30.1440.10 2 179 2.2E-80 T 22-04-2016 IPR022803 Ribosomal protein L5 domain YPO0222 138f8966827b522aff2eefaac3f66634 179 PANTHER PTHR11994 1 178 9.3E-104 T 22-04-2016 YPO0222 138f8966827b522aff2eefaac3f66634 179 SUPERFAMILY SSF55282 4 179 7.53E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain YPO0222 138f8966827b522aff2eefaac3f66634 179 PIRSF PIRSF002161 1 179 5.1E-66 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 YPO0222 138f8966827b522aff2eefaac3f66634 179 Pfam PF00281 Ribosomal protein L5 24 80 1.3E-28 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal YPO0222 138f8966827b522aff2eefaac3f66634 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.5E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal YPO2059 91ffbb1db21c6b03b93e2eeb5ab0450a 261 Gene3D G3DSA:1.10.3470.10 45 259 1.6E-12 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO2059 91ffbb1db21c6b03b93e2eeb5ab0450a 261 PANTHER PTHR30477:SF0 9 260 5.5E-90 T 22-04-2016 YPO2059 91ffbb1db21c6b03b93e2eeb5ab0450a 261 SUPERFAMILY SSF81345 3 255 1.05E-41 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO2059 91ffbb1db21c6b03b93e2eeb5ab0450a 261 Pfam PF00950 ABC 3 transport family 2 255 6.7E-84 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YPO2059 91ffbb1db21c6b03b93e2eeb5ab0450a 261 PANTHER PTHR30477 9 260 5.5E-90 T 22-04-2016 YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 SMART SM00382 368 555 2.0E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 PANTHER PTHR24221 1 582 0.0 T 22-04-2016 YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 Pfam PF00664 ABC transporter transmembrane region 27 297 3.3E-60 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 Gene3D G3DSA:3.40.50.300 342 574 1.4E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 SUPERFAMILY SSF90123 14 327 1.24E-76 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 Gene3D G3DSA:1.20.1560.10 13 327 4.9E-72 T 22-04-2016 YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 2.9E-264 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 PANTHER PTHR24221:SF188 1 582 0.0 T 22-04-2016 YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 SUPERFAMILY SSF52540 332 580 3.79E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1395 0f0910e0df9785cc95dc053b9e0b534f 582 Pfam PF00005 ABC transporter 359 509 7.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1577 dc3b118ee56d9268ac51c5d7a3700a3f 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 3.3E-131 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 YPO1577 dc3b118ee56d9268ac51c5d7a3700a3f 430 PANTHER PTHR33362:SF2 1 430 1.6E-249 T 22-04-2016 YPO1577 dc3b118ee56d9268ac51c5d7a3700a3f 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 3.1E-113 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YPO1577 dc3b118ee56d9268ac51c5d7a3700a3f 430 PIRSF PIRSF006066 1 428 5.3E-176 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 YPO1577 dc3b118ee56d9268ac51c5d7a3700a3f 430 PANTHER PTHR33362 1 430 1.6E-249 T 22-04-2016 YPO2184 a0510fcc7e2bcf65ad0ba5773b891e7c 301 SUPERFAMILY SSF161098 99 282 1.96E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2184 a0510fcc7e2bcf65ad0ba5773b891e7c 301 PANTHER PTHR30465 16 301 2.2E-142 T 22-04-2016 YPO2184 a0510fcc7e2bcf65ad0ba5773b891e7c 301 PANTHER PTHR30465:SF9 16 301 2.2E-142 T 22-04-2016 YPO2184 a0510fcc7e2bcf65ad0ba5773b891e7c 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 3.0E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2184 a0510fcc7e2bcf65ad0ba5773b891e7c 301 Gene3D G3DSA:1.10.3720.10 101 298 1.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2184 a0510fcc7e2bcf65ad0ba5773b891e7c 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 70 1.2E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO1514 e604cec2aa252629252913a2b86928e0 135 PANTHER PTHR33931:SF2 1 135 7.3E-61 T 22-04-2016 YPO1514 e604cec2aa252629252913a2b86928e0 135 PANTHER PTHR33931 1 135 7.3E-61 T 22-04-2016 YPO1514 e604cec2aa252629252913a2b86928e0 135 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 24.141 T 22-04-2016 IPR022957 Uncharacterised protein family UPF0299 YPO1514 e604cec2aa252629252913a2b86928e0 135 Pfam PF03788 LrgA family 23 113 7.8E-29 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 YPO3342 de8440d5690e6705144ac3503cf3410c 459 PANTHER PTHR30600:SF7 44 459 6.3E-197 T 22-04-2016 YPO3342 de8440d5690e6705144ac3503cf3410c 459 Gene3D G3DSA:1.10.760.10 319 455 4.1E-46 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO3342 de8440d5690e6705144ac3503cf3410c 459 Pfam PF14376 Haem-binding domain 17 148 1.2E-32 T 22-04-2016 IPR025992 Haem-binding domain YPO3342 de8440d5690e6705144ac3503cf3410c 459 PANTHER PTHR30600 44 459 6.3E-197 T 22-04-2016 YPO3342 de8440d5690e6705144ac3503cf3410c 459 Pfam PF03150 Di-haem cytochrome c peroxidase 180 327 1.7E-49 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 YPO3342 de8440d5690e6705144ac3503cf3410c 459 SUPERFAMILY SSF46626 165 315 1.26E-46 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO3342 de8440d5690e6705144ac3503cf3410c 459 Pfam PF00034 Cytochrome c 335 451 6.5E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO3342 de8440d5690e6705144ac3503cf3410c 459 Gene3D G3DSA:1.10.760.10 170 318 1.1E-50 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO3342 de8440d5690e6705144ac3503cf3410c 459 SUPERFAMILY SSF46626 316 455 2.01E-37 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO3342 de8440d5690e6705144ac3503cf3410c 459 SMART SM01235 14 151 3.2E-48 T 22-04-2016 IPR025992 Haem-binding domain YPO2201 20ddc1743b6fd3d771a17dddf8ef9985 211 PANTHER PTHR36920 1 211 1.6E-94 T 22-04-2016 YPO2201 20ddc1743b6fd3d771a17dddf8ef9985 211 SUPERFAMILY SSF56925 23 211 2.15E-28 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2201 20ddc1743b6fd3d771a17dddf8ef9985 211 PANTHER PTHR36920:SF1 1 211 1.6E-94 T 22-04-2016 YPO2201 20ddc1743b6fd3d771a17dddf8ef9985 211 Gene3D G3DSA:2.40.160.20 22 211 5.4E-68 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2201 20ddc1743b6fd3d771a17dddf8ef9985 211 Pfam PF03922 OmpW family 23 211 7.1E-64 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 YPO2201 20ddc1743b6fd3d771a17dddf8ef9985 211 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 203 211 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2169 0901941b6a45182f4709e592f68500f8 286 SUPERFAMILY SSF46785 5 79 3.47E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2169 0901941b6a45182f4709e592f68500f8 286 PANTHER PTHR30346:SF3 2 282 2.2E-91 T 22-04-2016 YPO2169 0901941b6a45182f4709e592f68500f8 286 Gene3D G3DSA:1.10.10.10 5 80 1.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2169 0901941b6a45182f4709e592f68500f8 286 PANTHER PTHR30346 2 282 2.2E-91 T 22-04-2016 YPO2169 0901941b6a45182f4709e592f68500f8 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.7E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO2945 8ec0494dc307f81b22ec2dce4bffe9be 181 PANTHER PTHR33420 1 181 1.8E-110 T 22-04-2016 YPO2945 8ec0494dc307f81b22ec2dce4bffe9be 181 Gene3D G3DSA:2.60.40.1090 26 181 1.3E-26 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO2945 8ec0494dc307f81b22ec2dce4bffe9be 181 Pfam PF16970 Type-1 fimbrial protein, A 52 181 1.9E-16 T 22-04-2016 YPO2945 8ec0494dc307f81b22ec2dce4bffe9be 181 SUPERFAMILY SSF49401 27 181 4.23E-24 T 22-04-2016 IPR008966 Adhesion domain YPO2945 8ec0494dc307f81b22ec2dce4bffe9be 181 PANTHER PTHR33420:SF2 1 181 1.8E-110 T 22-04-2016 YPO3177 5494c210234f1a93563ac7fc490281af 619 SUPERFAMILY SSF52518 9 199 1.29E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3177 5494c210234f1a93563ac7fc490281af 619 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO3177 5494c210234f1a93563ac7fc490281af 619 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 9.2E-40 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPO3177 5494c210234f1a93563ac7fc490281af 619 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO3177 5494c210234f1a93563ac7fc490281af 619 SMART SM00861 319 483 1.1E-67 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPO3177 5494c210234f1a93563ac7fc490281af 619 Gene3D G3DSA:3.40.50.970 26 201 3.1E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3177 5494c210234f1a93563ac7fc490281af 619 Gene3D G3DSA:3.40.50.970 242 334 3.1E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3177 5494c210234f1a93563ac7fc490281af 619 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 0.0 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO3177 5494c210234f1a93563ac7fc490281af 619 Pfam PF02780 Transketolase, C-terminal domain 494 610 6.3E-26 T 22-04-2016 IPR033248 Transketolase, C-terminal domain YPO3177 5494c210234f1a93563ac7fc490281af 619 SUPERFAMILY SSF52518 243 381 1.29E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3177 5494c210234f1a93563ac7fc490281af 619 PANTHER PTHR11624:SF20 241 618 0.0 T 22-04-2016 YPO3177 5494c210234f1a93563ac7fc490281af 619 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 YPO3177 5494c210234f1a93563ac7fc490281af 619 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 9.7E-117 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO3177 5494c210234f1a93563ac7fc490281af 619 Gene3D G3DSA:3.40.50.970 335 494 1.1E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3177 5494c210234f1a93563ac7fc490281af 619 PANTHER PTHR11624 241 618 0.0 T 22-04-2016 IPR033247 Transketolase family YPO3177 5494c210234f1a93563ac7fc490281af 619 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family YPO3177 5494c210234f1a93563ac7fc490281af 619 SUPERFAMILY SSF52518 316 503 3.84E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3177 5494c210234f1a93563ac7fc490281af 619 Gene3D G3DSA:3.40.50.920 495 618 3.0E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO3177 5494c210234f1a93563ac7fc490281af 619 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 619 46.052 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YPO3177 5494c210234f1a93563ac7fc490281af 619 SUPERFAMILY SSF52922 490 618 3.8E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO1191 5b3263e89856839b4a6c98a457b5cd22 232 PANTHER PTHR24220:SF404 3 232 2.2E-139 T 22-04-2016 YPO1191 5b3263e89856839b4a6c98a457b5cd22 232 PANTHER PTHR24220 3 232 2.2E-139 T 22-04-2016 YPO1191 5b3263e89856839b4a6c98a457b5cd22 232 SMART SM00382 26 211 5.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1191 5b3263e89856839b4a6c98a457b5cd22 232 Gene3D G3DSA:3.40.50.300 1 216 4.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1191 5b3263e89856839b4a6c98a457b5cd22 232 Pfam PF00005 ABC transporter 17 161 9.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1191 5b3263e89856839b4a6c98a457b5cd22 232 SUPERFAMILY SSF52540 2 216 9.43E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1191 5b3263e89856839b4a6c98a457b5cd22 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 3.7E-107 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE YPO1055 6e14ee5d934ccf51962f5793c9f18b88 181 PANTHER PTHR30272 1 151 1.2E-89 T 22-04-2016 YPO1055 6e14ee5d934ccf51962f5793c9f18b88 181 Pfam PF07977 FabA-like domain 17 141 2.3E-40 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPO1055 6e14ee5d934ccf51962f5793c9f18b88 181 Gene3D G3DSA:3.10.129.10 4 147 3.5E-58 T 22-04-2016 IPR029069 HotDog domain YPO1055 6e14ee5d934ccf51962f5793c9f18b88 181 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.239 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPO1055 6e14ee5d934ccf51962f5793c9f18b88 181 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 5.2E-60 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPO1055 6e14ee5d934ccf51962f5793c9f18b88 181 SUPERFAMILY SSF54637 10 151 1.22E-50 T 22-04-2016 IPR029069 HotDog domain YPO2187 04529ee1c09dd2452fd95493b1d545b0 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 34.84 T 22-04-2016 IPR007376 dsDNA mimic, putative YPO2187 04529ee1c09dd2452fd95493b1d545b0 107 Gene3D G3DSA:3.10.450.140 7 107 1.6E-50 T 22-04-2016 IPR007376 dsDNA mimic, putative YPO2187 04529ee1c09dd2452fd95493b1d545b0 107 PIRSF PIRSF004916 1 107 4.6E-56 T 22-04-2016 IPR007376 dsDNA mimic, putative YPO2187 04529ee1c09dd2452fd95493b1d545b0 107 SUPERFAMILY SSF102816 1 107 5.62E-52 T 22-04-2016 IPR007376 dsDNA mimic, putative YPO2187 04529ee1c09dd2452fd95493b1d545b0 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 7.0E-47 T 22-04-2016 IPR007376 dsDNA mimic, putative YPO2187 04529ee1c09dd2452fd95493b1d545b0 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 1.0E-53 T 22-04-2016 IPR007376 dsDNA mimic, putative YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 Gene3D G3DSA:2.40.128.130 755 1070 2.2E-67 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 PANTHER PTHR35037:SF1 1 1067 0.0 T 22-04-2016 YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 Gene3D G3DSA:2.160.20.20 279 750 1.3E-68 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 Gene3D G3DSA:2.160.20.20 36 278 1.1E-6 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 Pfam PF03212 Pertactin 632 738 5.0E-12 T 22-04-2016 IPR004899 Pertactin, central region YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 Pfam PF03797 Autotransporter beta-domain 803 1053 1.8E-30 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 SMART SM00869 799 1058 3.2E-28 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 SUPERFAMILY SSF103515 761 1070 2.88E-42 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 635 1070 2.1E-112 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 SUPERFAMILY SSF51126 436 739 4.39E-47 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 SUPERFAMILY SSF51126 160 392 4.39E-47 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO3984 5df695b7856ba70e6ebd5c043e752671 1070 PANTHER PTHR35037 1 1067 0.0 T 22-04-2016 YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.1E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 SUPERFAMILY SSF48498 85 203 5.34E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 SUPERFAMILY SSF46689 2 78 1.75E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 Gene3D G3DSA:1.10.357.10 1 203 8.2E-39 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 PANTHER PTHR30328:SF26 1 218 1.8E-157 T 22-04-2016 YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 PANTHER PTHR30328 1 218 1.8E-157 T 22-04-2016 YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO3131 04e9e7613edab25d7d9c910cc3e46883 218 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 1.1E-54 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 YPO3490 501383f999637018710f52eac7325c7e 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPO3490 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF50249 620 695 1.04E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3490 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF54791 554 639 1.25E-22 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 YPO3490 501383f999637018710f52eac7325c7e 705 Gene3D G3DSA:1.10.10.400 226 313 1.6E-26 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPO3490 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF54211 5 144 7.59E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3490 501383f999637018710f52eac7325c7e 705 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 1.4E-5 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPO3490 501383f999637018710f52eac7325c7e 705 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 8.1E-14 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPO3490 501383f999637018710f52eac7325c7e 705 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 1.1E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 YPO3490 501383f999637018710f52eac7325c7e 705 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 2.0E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 YPO3490 501383f999637018710f52eac7325c7e 705 Gene3D G3DSA:2.40.50.140 619 692 1.3E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3490 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF46915 238 320 4.18E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPO3490 501383f999637018710f52eac7325c7e 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.374 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPO3490 501383f999637018710f52eac7325c7e 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 4.7E-26 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPO3490 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF54211 293 488 4.66E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3490 501383f999637018710f52eac7325c7e 705 Gene3D G3DSA:3.30.230.70 5 225 3.8E-82 T 22-04-2016 IPR027408 PNPase/RNase PH domain YPO3490 501383f999637018710f52eac7325c7e 705 Gene3D G3DSA:3.30.230.70 314 542 2.7E-88 T 22-04-2016 IPR027408 PNPase/RNase PH domain YPO3490 501383f999637018710f52eac7325c7e 705 SMART SM00316 620 690 6.6E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO3490 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF55666 450 548 6.59E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPO3490 501383f999637018710f52eac7325c7e 705 Pfam PF00575 S1 RNA binding domain 619 690 1.9E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO3490 501383f999637018710f52eac7325c7e 705 SUPERFAMILY SSF55666 145 235 2.24E-30 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YPO3490 501383f999637018710f52eac7325c7e 705 PIRSF PIRSF005499 2 705 3.7E-300 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPO3490 501383f999637018710f52eac7325c7e 705 SMART SM00322 552 617 3.3E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YPO3490 501383f999637018710f52eac7325c7e 705 PANTHER PTHR11252 4 699 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YPO3490 501383f999637018710f52eac7325c7e 705 Gene3D G3DSA:3.30.1370.10 552 618 1.3E-25 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 YPO3490 501383f999637018710f52eac7325c7e 705 Pfam PF00013 KH domain 556 614 1.1E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 YPO0764 73e3773419e25541d0623b60bb2d30c0 741 Gene3D G3DSA:3.55.50.10 127 219 1.4E-34 T 22-04-2016 YPO0764 73e3773419e25541d0623b60bb2d30c0 741 SUPERFAMILY SSF69279 40 214 9.64E-55 T 22-04-2016 YPO0764 73e3773419e25541d0623b60bb2d30c0 741 Gene3D G3DSA:2.40.50.230 397 478 6.3E-41 T 22-04-2016 IPR006531 Gp5 N-terminal YPO0764 73e3773419e25541d0623b60bb2d30c0 741 PANTHER PTHR32305:SF11 18 707 0.0 T 22-04-2016 YPO0764 73e3773419e25541d0623b60bb2d30c0 741 PANTHER PTHR32305 18 707 0.0 T 22-04-2016 YPO0764 73e3773419e25541d0623b60bb2d30c0 741 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 51 530 3.9E-206 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO0764 73e3773419e25541d0623b60bb2d30c0 741 SUPERFAMILY SSF69349 469 716 3.45E-48 T 22-04-2016 YPO0764 73e3773419e25541d0623b60bb2d30c0 741 SUPERFAMILY SSF69279 218 392 1.21E-42 T 22-04-2016 YPO0764 73e3773419e25541d0623b60bb2d30c0 741 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 530 551 1.5E-4 T 22-04-2016 IPR010609 Gp5, C-terminal YPO0764 73e3773419e25541d0623b60bb2d30c0 741 SUPERFAMILY SSF69255 391 478 1.36E-33 T 22-04-2016 YPO0764 73e3773419e25541d0623b60bb2d30c0 741 Pfam PF05954 Phage late control gene D protein (GPD) 58 356 1.6E-86 T 22-04-2016 YPO0764 73e3773419e25541d0623b60bb2d30c0 741 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 40 548 1.8E-204 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 2.4E-126 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 Pfam PF14489 QueF-like protein 195 269 1.1E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 PANTHER PTHR34354:SF1 2 281 8.3E-112 T 22-04-2016 YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 PIRSF PIRSF004750 6 281 9.9E-125 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 SUPERFAMILY SSF55620 185 266 6.52E-10 T 22-04-2016 YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 Gene3D G3DSA:3.30.1130.10 21 137 4.4E-41 T 22-04-2016 YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.901 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 8.7E-47 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 PANTHER PTHR34354 2 281 8.3E-112 T 22-04-2016 YPO1034 7c7f860f56c3d256c61f8b4c2a65ef67 281 Gene3D G3DSA:3.30.1130.10 145 279 1.5E-55 T 22-04-2016 YPO3624 65a5c826d266e3eb473cbe74ce8fe0f1 373 Gene3D G3DSA:3.40.190.10 125 222 2.4E-29 T 22-04-2016 YPO3624 65a5c826d266e3eb473cbe74ce8fe0f1 373 Pfam PF09084 NMT1/THI5 like 82 198 1.1E-11 T 22-04-2016 IPR015168 SsuA/THI5-like YPO3624 65a5c826d266e3eb473cbe74ce8fe0f1 373 PANTHER PTHR30024:SF11 4 325 6.9E-170 T 22-04-2016 YPO3624 65a5c826d266e3eb473cbe74ce8fe0f1 373 SMART SM00062 43 264 1.5E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO3624 65a5c826d266e3eb473cbe74ce8fe0f1 373 SUPERFAMILY SSF53850 41 275 5.26E-48 T 22-04-2016 YPO3624 65a5c826d266e3eb473cbe74ce8fe0f1 373 PANTHER PTHR30024 4 325 6.9E-170 T 22-04-2016 YPO3624 65a5c826d266e3eb473cbe74ce8fe0f1 373 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 45 324 3.1E-83 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 3.9E-29 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 SUPERFAMILY SSF51246 329 425 6.8E-34 T 22-04-2016 IPR011054 Rudiment single hybrid motif YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 2.5E-182 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 SUPERFAMILY SSF56059 104 323 1.38E-67 T 22-04-2016 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.6E-84 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 Gene3D G3DSA:3.30.1490.20 121 190 2.0E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 Gene3D G3DSA:3.90.600.10 331 424 3.1E-35 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 SUPERFAMILY SSF52440 1 103 6.76E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 4.4E-34 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 PANTHER PTHR10520 1 426 4.5E-296 T 22-04-2016 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 Gene3D G3DSA:3.30.470.20 191 328 1.6E-62 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.622 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 Gene3D G3DSA:3.40.50.20 2 95 7.6E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 SMART SM01209 103 296 2.3E-141 T 22-04-2016 YPO3729 1ba660d9c3a4d2a54a9ba92c391e9627 428 SMART SM01210 330 424 3.1E-55 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO2720 d3861ff1b8f3e7303be808201d305a55 241 Pfam PF11967 Recombination protein O N terminal 4 76 1.1E-22 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal YPO2720 d3861ff1b8f3e7303be808201d305a55 241 Gene3D G3DSA:2.40.50.140 6 75 4.6E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2720 d3861ff1b8f3e7303be808201d305a55 241 SUPERFAMILY SSF50249 4 75 3.08E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2720 d3861ff1b8f3e7303be808201d305a55 241 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.902 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YPO2720 d3861ff1b8f3e7303be808201d305a55 241 Pfam PF02565 Recombination protein O C terminal 83 226 7.1E-24 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YPO2720 d3861ff1b8f3e7303be808201d305a55 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 2.3E-38 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YPO2720 d3861ff1b8f3e7303be808201d305a55 241 PANTHER PTHR33991 1 241 3.3E-69 T 22-04-2016 YPO2720 d3861ff1b8f3e7303be808201d305a55 241 SUPERFAMILY SSF57863 86 173 5.75E-9 T 22-04-2016 YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 SUPERFAMILY SSF56784 1 265 7.02E-69 T 22-04-2016 IPR023214 HAD-like domain YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 PANTHER PTHR10000 1 266 5.7E-146 T 22-04-2016 YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 Gene3D G3DSA:3.40.50.1000 1 72 4.1E-54 T 22-04-2016 IPR023214 HAD-like domain YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 Gene3D G3DSA:3.40.50.1000 177 265 4.1E-54 T 22-04-2016 IPR023214 HAD-like domain YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 1.3E-62 T 22-04-2016 IPR000150 Cof protein GO:0016787 YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 1.3E-26 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 PANTHER PTHR10000:SF20 1 266 5.7E-146 T 22-04-2016 YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 2.8E-61 T 22-04-2016 IPR023214 HAD-like domain YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 Gene3D G3DSA:3.30.1240.10 82 176 5.3E-22 T 22-04-2016 YPO3829 56eb2b984b18f7f7180016db0bb4cf55 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YPO1029 1c3afa085b9c4af09502a412da9e8580 305 Pfam PF03466 LysR substrate binding domain 91 292 1.0E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YPO1029 1c3afa085b9c4af09502a412da9e8580 305 PANTHER PTHR30537 1 305 7.1E-161 T 22-04-2016 YPO1029 1c3afa085b9c4af09502a412da9e8580 305 Gene3D G3DSA:1.10.10.10 2 88 1.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1029 1c3afa085b9c4af09502a412da9e8580 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1029 1c3afa085b9c4af09502a412da9e8580 305 Gene3D G3DSA:3.40.190.10 180 258 2.7E-16 T 22-04-2016 YPO1029 1c3afa085b9c4af09502a412da9e8580 305 SUPERFAMILY SSF53850 93 296 2.33E-40 T 22-04-2016 YPO1029 1c3afa085b9c4af09502a412da9e8580 305 SUPERFAMILY SSF46785 3 87 3.59E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1029 1c3afa085b9c4af09502a412da9e8580 305 Gene3D G3DSA:3.40.190.10 94 179 1.8E-34 T 22-04-2016 YPO1029 1c3afa085b9c4af09502a412da9e8580 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1029 1c3afa085b9c4af09502a412da9e8580 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1029 1c3afa085b9c4af09502a412da9e8580 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1029 1c3afa085b9c4af09502a412da9e8580 305 PANTHER PTHR30537:SF26 1 305 7.1E-161 T 22-04-2016 YPO0292 52b6077f1f783c4da845fee0afdcd006 378 Pfam PF15609 Phosphoribosyl transferase 32 218 3.8E-62 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO0292 52b6077f1f783c4da845fee0afdcd006 378 PIRSF PIRSF020967 1 378 1.2E-221 T 22-04-2016 IPR011214 Uncharacterised conserved protein UCP020967 YPO0292 52b6077f1f783c4da845fee0afdcd006 378 SUPERFAMILY SSF53271 27 220 3.15E-19 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO0292 52b6077f1f783c4da845fee0afdcd006 378 Pfam PF12500 TRSP domain C terminus to PRTase_2 265 356 1.1E-20 T 22-04-2016 IPR022537 TRSP domain YPO0292 52b6077f1f783c4da845fee0afdcd006 378 Gene3D G3DSA:3.40.50.2020 56 211 2.6E-10 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO3358 bd9830940cb3f095d7d551882c8c77ae 254 PANTHER PTHR30457 2 251 7.7E-101 T 22-04-2016 YPO3358 bd9830940cb3f095d7d551882c8c77ae 254 Pfam PF01975 Survival protein SurE 4 181 6.6E-56 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPO3358 bd9830940cb3f095d7d551882c8c77ae 254 SUPERFAMILY SSF64167 2 249 3.4E-81 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPO3358 bd9830940cb3f095d7d551882c8c77ae 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 7.9E-75 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPO3358 bd9830940cb3f095d7d551882c8c77ae 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 39.415 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPO3358 bd9830940cb3f095d7d551882c8c77ae 254 Gene3D G3DSA:3.40.1210.10 2 248 2.7E-84 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 Pfam PF03212 Pertactin 363 479 3.5E-6 T 22-04-2016 IPR004899 Pertactin, central region YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 SUPERFAMILY SSF103515 686 994 3.01E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 Pfam PF03797 Autotransporter beta-domain 718 979 5.1E-44 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 373 509 1.1E-23 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 603 994 4.3E-67 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 Gene3D G3DSA:2.40.128.130 679 994 1.7E-66 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 SMART SM00869 720 983 9.1E-32 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 PANTHER PTHR12338:SF5 5 994 3.2E-197 T 22-04-2016 YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 SUPERFAMILY SSF51126 23 480 1.38E-45 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 PANTHER PTHR12338 5 994 3.2E-197 T 22-04-2016 YPO0587 c19ec3f1d0a836b6854d4182cdd0dad2 994 Gene3D G3DSA:2.160.20.20 64 507 9.5E-51 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YPMT1.56c 3cb5ab07ce9cd6a453972c6f91430df3 162 Pfam PF03755 YicC-like family, N-terminal region 1 111 9.2E-25 T 22-04-2016 IPR013527 YicC-like, N-terminal YPMT1.56c 3cb5ab07ce9cd6a453972c6f91430df3 162 PANTHER PTHR30636 1 162 2.5E-36 T 22-04-2016 YPMT1.56c 3cb5ab07ce9cd6a453972c6f91430df3 162 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 162 1.8E-55 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 YPO1760 6c5cc686bbb8077a24033660da0eac63 155 SUPERFAMILY SSF46785 4 138 1.34E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1760 6c5cc686bbb8077a24033660da0eac63 155 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 1.2E-54 T 22-04-2016 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 YPO1760 6c5cc686bbb8077a24033660da0eac63 155 Gene3D G3DSA:1.10.10.10 3 132 2.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1760 6c5cc686bbb8077a24033660da0eac63 155 PANTHER PTHR33164 1 146 5.0E-92 T 22-04-2016 YPO1760 6c5cc686bbb8077a24033660da0eac63 155 SMART SM00347 22 122 1.3E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO1760 6c5cc686bbb8077a24033660da0eac63 155 PANTHER PTHR33164:SF13 1 146 5.0E-92 T 22-04-2016 YPO1760 6c5cc686bbb8077a24033660da0eac63 155 Pfam PF01047 MarR family 29 86 1.8E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 PANTHER PTHR35892:SF2 2 179 1.5E-101 T 22-04-2016 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 Gene3D G3DSA:2.40.160.20 30 179 8.5E-37 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 PANTHER PTHR35892 2 179 1.5E-101 T 22-04-2016 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 171 179 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 167 178 1.1E-31 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 140 161 1.1E-31 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 93 116 1.1E-31 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 52 64 1.1E-31 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 SUPERFAMILY SSF56925 30 179 2.12E-27 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2190 93d10a9b317cb79a19674ba557cbd8d2 179 Pfam PF13505 Outer membrane protein beta-barrel domain 11 179 5.0E-24 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPO1681 7281f707051d42cbc207aac299893beb 214 PANTHER PTHR22617 16 214 9.3E-144 T 22-04-2016 YPO1681 7281f707051d42cbc207aac299893beb 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 214 3.5E-76 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YPO1681 7281f707051d42cbc207aac299893beb 214 PANTHER PTHR22617:SF32 16 214 9.3E-144 T 22-04-2016 YPO1681 7281f707051d42cbc207aac299893beb 214 SUPERFAMILY SSF75708 13 213 2.35E-65 T 22-04-2016 YPO1681 7281f707051d42cbc207aac299893beb 214 Gene3D G3DSA:1.20.5.590 1 34 1.1E-18 T 22-04-2016 YPO1681 7281f707051d42cbc207aac299893beb 214 Gene3D G3DSA:1.10.287.500 35 168 6.5E-56 T 22-04-2016 YPO1681 7281f707051d42cbc207aac299893beb 214 PIRSF PIRSF002884 1 214 1.2E-87 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YPO1583a a302bb92c08b0a05e5810d9c69bc8177 98 Pfam PF13991 BssS protein family 11 77 8.9E-37 T 22-04-2016 IPR025730 Biofilm regulator BssS YPO1583a a302bb92c08b0a05e5810d9c69bc8177 98 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 70 6.0E-35 T 22-04-2016 IPR025730 Biofilm regulator BssS YPO3432 f2ed23e8ed18bc2d47cc3826de5af644 68 PANTHER PTHR36150:SF1 3 64 4.0E-28 T 22-04-2016 YPO3432 f2ed23e8ed18bc2d47cc3826de5af644 68 PANTHER PTHR36150 3 64 4.0E-28 T 22-04-2016 YPO3432 f2ed23e8ed18bc2d47cc3826de5af644 68 SUPERFAMILY SSF57716 5 63 1.71E-21 T 22-04-2016 YPO3432 f2ed23e8ed18bc2d47cc3826de5af644 68 Pfam PF03884 Domain of unknown function (DUF329) 8 58 1.1E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 YPO3432 f2ed23e8ed18bc2d47cc3826de5af644 68 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.968 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 YPO3432 f2ed23e8ed18bc2d47cc3826de5af644 68 Gene3D G3DSA:3.30.50.10 2 63 4.2E-27 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 YPO3497 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF47794 429 492 1.88E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 YPO3497 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:1.10.150.20 357 414 1.3E-22 T 22-04-2016 YPO3497 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:3.30.1480.10 1 124 2.7E-46 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YPO3497 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF47794 355 415 1.52E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 YPO3497 6911cb32b94c96760f650d1285816272 495 Pfam PF13184 NusA-like KH domain 230 297 1.1E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 YPO3497 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF54814 279 342 6.54E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YPO3497 6911cb32b94c96760f650d1285816272 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 6.7E-130 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 YPO3497 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:3.30.300.20 199 277 6.5E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPO3497 6911cb32b94c96760f650d1285816272 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 4.2E-18 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication YPO3497 6911cb32b94c96760f650d1285816272 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 5.9E-21 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication YPO3497 6911cb32b94c96760f650d1285816272 495 PANTHER PTHR22648 1 448 1.7E-187 T 22-04-2016 YPO3497 6911cb32b94c96760f650d1285816272 495 SMART SM00316 133 200 8.9E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO3497 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF50249 133 199 2.23E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3497 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF54814 202 278 1.18E-28 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YPO3497 6911cb32b94c96760f650d1285816272 495 SUPERFAMILY SSF69705 1 126 5.62E-42 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YPO3497 6911cb32b94c96760f650d1285816272 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.9E-9 T 22-04-2016 YPO3497 6911cb32b94c96760f650d1285816272 495 PANTHER PTHR22648:SF0 1 448 1.7E-187 T 22-04-2016 YPO3497 6911cb32b94c96760f650d1285816272 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.039 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 YPO3497 6911cb32b94c96760f650d1285816272 495 SMART SM00322 230 293 17.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YPO3497 6911cb32b94c96760f650d1285816272 495 SMART SM00322 301 358 0.19 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YPO3497 6911cb32b94c96760f650d1285816272 495 Pfam PF08529 NusA N-terminal domain 4 123 8.2E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YPO3497 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:1.10.150.20 429 493 9.2E-25 T 22-04-2016 YPO3497 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:2.40.50.140 128 198 1.5E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3497 6911cb32b94c96760f650d1285816272 495 Gene3D G3DSA:3.30.300.20 278 346 4.1E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPO3955 2f7323db960379460ea1965f80a39ed3 331 SUPERFAMILY SSF47413 5 63 8.94E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3955 2f7323db960379460ea1965f80a39ed3 331 Gene3D G3DSA:3.40.50.2300 62 173 3.7E-39 T 22-04-2016 YPO3955 2f7323db960379460ea1965f80a39ed3 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO3955 2f7323db960379460ea1965f80a39ed3 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.5E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO3955 2f7323db960379460ea1965f80a39ed3 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 307 5.4E-33 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO3955 2f7323db960379460ea1965f80a39ed3 331 PANTHER PTHR30146:SF2 4 327 2.0E-191 T 22-04-2016 YPO3955 2f7323db960379460ea1965f80a39ed3 331 Gene3D G3DSA:1.10.260.40 4 59 3.5E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3955 2f7323db960379460ea1965f80a39ed3 331 SMART SM00354 5 75 3.6E-24 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO3955 2f7323db960379460ea1965f80a39ed3 331 SUPERFAMILY SSF53822 63 317 2.36E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO3955 2f7323db960379460ea1965f80a39ed3 331 Gene3D G3DSA:3.40.50.2300 174 330 6.7E-42 T 22-04-2016 YPO3955 2f7323db960379460ea1965f80a39ed3 331 PANTHER PTHR30146 4 327 2.0E-191 T 22-04-2016 YPO2596 8b34efd9bf8e4af72c32e129f946ba74 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.106 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPO2596 8b34efd9bf8e4af72c32e129f946ba74 127 PANTHER PTHR28259 1 126 1.5E-45 T 22-04-2016 YPO2596 8b34efd9bf8e4af72c32e129f946ba74 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 2.0E-38 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPO2596 8b34efd9bf8e4af72c32e129f946ba74 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 4.7E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 9.3E-74 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PANTHER PTHR30046 3 329 2.0E-228 T 22-04-2016 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PANTHER PTHR30046 358 570 2.0E-228 T 22-04-2016 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 199 217 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 156 170 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 268 286 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 124 142 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PRINTS PR01009 Flagellar M-ring protein signature 375 399 6.3E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 Pfam PF08345 Flagellar M-ring protein C-terminal 255 447 2.1E-49 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PANTHER PTHR30046:SF0 3 329 2.0E-228 T 22-04-2016 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PANTHER PTHR30046:SF0 358 570 2.0E-228 T 22-04-2016 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 18 569 2.2E-171 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO1830 e07f6d614cf96bbd00cedf6153f268b2 570 PIRSF PIRSF004862 8 570 1.1E-162 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO0522 96623e3f85aba48302f1759a82861731 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 22 324 1.1E-144 T 22-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 YPO0522 96623e3f85aba48302f1759a82861731 330 PANTHER PTHR30006 1 329 7.2E-142 T 22-04-2016 YPO0522 96623e3f85aba48302f1759a82861731 330 PANTHER PTHR30006:SF3 1 329 7.2E-142 T 22-04-2016 YPO0522 96623e3f85aba48302f1759a82861731 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 11 330 1.5E-161 T 22-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 YPO0522 96623e3f85aba48302f1759a82861731 330 Gene3D G3DSA:3.40.190.10 7 123 3.3E-17 T 22-04-2016 YPO0522 96623e3f85aba48302f1759a82861731 330 Gene3D G3DSA:3.40.190.10 262 320 3.3E-17 T 22-04-2016 YPO0522 96623e3f85aba48302f1759a82861731 330 Gene3D G3DSA:3.40.190.10 125 261 2.6E-25 T 22-04-2016 YPO0522 96623e3f85aba48302f1759a82861731 330 Pfam PF13343 Bacterial extracellular solute-binding protein 77 304 1.7E-17 T 22-04-2016 YPO0522 96623e3f85aba48302f1759a82861731 330 SUPERFAMILY SSF53850 24 325 1.09E-64 T 22-04-2016 YPO2473 12754ae0c65055c3249493a150006232 312 PANTHER PTHR37036:SF1 2 312 7.8E-291 T 22-04-2016 YPO2473 12754ae0c65055c3249493a150006232 312 SUPERFAMILY SSF75005 23 310 7.85E-58 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPO2473 12754ae0c65055c3249493a150006232 312 PANTHER PTHR37036 2 312 7.8E-291 T 22-04-2016 YPO2473 12754ae0c65055c3249493a150006232 312 Pfam PF08950 Protein of unknown function (DUF1861) 22 310 8.4E-126 T 22-04-2016 IPR015045 Protein of unknown function DUF1861 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 PANTHER PTHR22642:SF7 325 506 5.5E-223 T 22-04-2016 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 PANTHER PTHR22642:SF7 25 301 5.5E-223 T 22-04-2016 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 SUPERFAMILY SSF51338 2 183 4.54E-56 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 571 2.5E-283 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 Gene3D G3DSA:3.20.20.140 150 434 1.4E-184 T 22-04-2016 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 Gene3D G3DSA:3.20.20.140 493 570 1.4E-184 T 22-04-2016 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 Pfam PF01979 Amidohydrolase family 130 459 7.8E-70 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 Hamap MF_01953 Urease subunit alpha [ureC]. 2 572 53.489 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 SUPERFAMILY SSF51556 486 571 5.11E-178 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO2667 0e06d64da01f800eae2b85a8f3155752 572 SUPERFAMILY SSF51556 135 437 5.11E-178 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO2667 0e06d64da01f800eae2b85a8f3155752 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 124 7.7E-51 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 5.2E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 5.2E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 5.2E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 5.2E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 PANTHER PTHR22642 325 506 5.5E-223 T 22-04-2016 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 PANTHER PTHR22642 25 301 5.5E-223 T 22-04-2016 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 ProSitePatterns PS00145 Urease active site. 322 338 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2667 0e06d64da01f800eae2b85a8f3155752 572 Gene3D G3DSA:2.30.40.10 68 149 4.6E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO3327 51338bb3a48c58725c849059338df140 269 SUPERFAMILY SSF46785 5 60 2.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3327 51338bb3a48c58725c849059338df140 269 SMART SM00420 6 58 7.4E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO3327 51338bb3a48c58725c849059338df140 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.6E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO3327 51338bb3a48c58725c849059338df140 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.6E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO3327 51338bb3a48c58725c849059338df140 269 PANTHER PTHR30363 1 264 7.4E-130 T 22-04-2016 YPO3327 51338bb3a48c58725c849059338df140 269 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.7E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO3327 51338bb3a48c58725c849059338df140 269 Pfam PF00455 DeoR C terminal sensor domain 92 248 2.9E-50 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPO3327 51338bb3a48c58725c849059338df140 269 SUPERFAMILY SSF100950 93 249 1.99E-29 T 22-04-2016 YPO3327 51338bb3a48c58725c849059338df140 269 PANTHER PTHR30363:SF11 1 264 7.4E-130 T 22-04-2016 YPO3327 51338bb3a48c58725c849059338df140 269 Gene3D G3DSA:3.40.50.1360 94 232 2.4E-9 T 22-04-2016 YPO3327 51338bb3a48c58725c849059338df140 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPO3327 51338bb3a48c58725c849059338df140 269 SMART SM01134 90 250 1.1E-62 T 22-04-2016 YPO0179 986b624e204104bd084c57516858a375 78 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 7.0E-27 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPO0179 986b624e204104bd084c57516858a375 78 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.09 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPO0179 986b624e204104bd084c57516858a375 78 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 8.8E-34 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPO0179 986b624e204104bd084c57516858a375 78 PIRSF PIRSF006169 1 76 2.0E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPO0179 986b624e204104bd084c57516858a375 78 SUPERFAMILY SSF118001 1 72 2.35E-28 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPO0179 986b624e204104bd084c57516858a375 78 Gene3D G3DSA:1.10.10.610 1 72 4.4E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 418 1.1E-184 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 Gene3D G3DSA:3.90.1150.10 332 418 5.8E-60 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 Gene3D G3DSA:3.90.1150.10 3 61 5.8E-60 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 PANTHER PTHR11986 8 420 2.7E-218 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 SUPERFAMILY SSF53383 1 418 1.38E-133 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 422 49.793 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 Gene3D G3DSA:3.40.640.10 62 329 5.2E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 Pfam PF00202 Aminotransferase class-III 27 418 2.7E-128 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YPO1150 9a3c967b08f82c52f7f5c46737cd360c 422 PANTHER PTHR11986:SF8 8 420 2.7E-218 T 22-04-2016 YPO1319 cf3314fe03049e377b91a88291525301 223 PANTHER PTHR30450:SF1 1 223 2.9E-123 T 22-04-2016 YPO1319 cf3314fe03049e377b91a88291525301 223 PANTHER PTHR30450 1 223 2.9E-123 T 22-04-2016 YPO1319 cf3314fe03049e377b91a88291525301 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 215 1.9E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1319 cf3314fe03049e377b91a88291525301 223 Gene3D G3DSA:1.10.3720.10 17 219 3.2E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1319 cf3314fe03049e377b91a88291525301 223 SUPERFAMILY SSF161098 16 205 6.67E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0499 3ae9846a38b6e114b168de7d17d80d3f 337 PANTHER PTHR37951 1 337 9.3E-147 T 22-04-2016 YPO0499 3ae9846a38b6e114b168de7d17d80d3f 337 Pfam PF06812 ImpA, N-terminal, type VI secretion system 21 129 3.1E-12 T 22-04-2016 IPR010657 ImpA, N-terminal YPO0499 3ae9846a38b6e114b168de7d17d80d3f 337 PANTHER PTHR37951:SF1 1 337 9.3E-147 T 22-04-2016 YPO0191 c048cf293135021ed37c6271bb938952 602 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 599 50.763 T 22-04-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 YPO0191 c048cf293135021ed37c6271bb938952 602 Pfam PF02254 TrkA-N domain 403 513 1.8E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPO0191 c048cf293135021ed37c6271bb938952 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 1.6E-88 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 YPO0191 c048cf293135021ed37c6271bb938952 602 SUPERFAMILY SSF51735 402 529 3.36E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0191 c048cf293135021ed37c6271bb938952 602 Gene3D G3DSA:3.40.50.720 397 531 6.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0191 c048cf293135021ed37c6271bb938952 602 PANTHER PTHR16254:SF6 1 557 2.2E-268 T 22-04-2016 YPO0191 c048cf293135021ed37c6271bb938952 602 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 1.7E-67 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YPO0191 c048cf293135021ed37c6271bb938952 602 PANTHER PTHR16254 1 557 2.2E-268 T 22-04-2016 YPO2990 5927c1a516c41360fb93996eb5e70ae8 328 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 191 317 1.7E-49 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPO2990 5927c1a516c41360fb93996eb5e70ae8 328 SMART SM00771 188 318 2.5E-78 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPO2990 5927c1a516c41360fb93996eb5e70ae8 328 PANTHER PTHR38685:SF1 2 328 2.3E-106 T 22-04-2016 YPO2990 5927c1a516c41360fb93996eb5e70ae8 328 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 320 27.639 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 YPO2990 5927c1a516c41360fb93996eb5e70ae8 328 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 318 4.3E-83 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 YPO2990 5927c1a516c41360fb93996eb5e70ae8 328 PANTHER PTHR38685 2 328 2.3E-106 T 22-04-2016 YPO2990 5927c1a516c41360fb93996eb5e70ae8 328 Gene3D G3DSA:3.30.1400.10 188 321 4.8E-61 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPO2990 5927c1a516c41360fb93996eb5e70ae8 328 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 207 325 4.0E-65 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPO2990 5927c1a516c41360fb93996eb5e70ae8 328 SUPERFAMILY SSF64383 189 322 9.15E-49 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YPO2625 5f44de0692beb97fd745b3817367b1c4 409 PANTHER PTHR18964 65 290 7.9E-218 T 22-04-2016 YPO2625 5f44de0692beb97fd745b3817367b1c4 409 SUPERFAMILY SSF53067 89 395 1.82E-55 T 22-04-2016 YPO2625 5f44de0692beb97fd745b3817367b1c4 409 PANTHER PTHR18964:SF128 307 404 7.9E-218 T 22-04-2016 YPO2625 5f44de0692beb97fd745b3817367b1c4 409 Pfam PF01047 MarR family 26 64 1.3E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YPO2625 5f44de0692beb97fd745b3817367b1c4 409 Pfam PF00480 ROK family 90 393 5.1E-89 T 22-04-2016 IPR000600 ROK family YPO2625 5f44de0692beb97fd745b3817367b1c4 409 PANTHER PTHR18964 307 404 7.9E-218 T 22-04-2016 YPO2625 5f44de0692beb97fd745b3817367b1c4 409 Gene3D G3DSA:3.30.420.40 86 225 3.9E-30 T 22-04-2016 YPO2625 5f44de0692beb97fd745b3817367b1c4 409 ProSitePatterns PS01125 ROK family signature. 221 248 - T 22-04-2016 IPR000600 ROK family YPO2625 5f44de0692beb97fd745b3817367b1c4 409 Gene3D G3DSA:3.30.420.40 226 377 2.0E-47 T 22-04-2016 YPO2625 5f44de0692beb97fd745b3817367b1c4 409 SUPERFAMILY SSF46785 15 80 2.07E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2625 5f44de0692beb97fd745b3817367b1c4 409 Gene3D G3DSA:1.10.10.10 15 80 5.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2625 5f44de0692beb97fd745b3817367b1c4 409 PANTHER PTHR18964:SF128 65 290 7.9E-218 T 22-04-2016 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.7E-54 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 Gene3D G3DSA:3.30.750.70 74 153 1.1E-18 T 22-04-2016 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 PANTHER PTHR30363:SF1 1 252 3.1E-127 T 22-04-2016 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 PANTHER PTHR30363 1 252 3.1E-127 T 22-04-2016 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 SUPERFAMILY SSF46785 3 73 9.34E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 Gene3D G3DSA:1.10.10.10 2 58 1.1E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 SMART SM01134 72 233 8.0E-72 T 22-04-2016 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 SUPERFAMILY SSF100950 74 234 1.07E-29 T 22-04-2016 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 SMART SM00420 6 58 3.0E-26 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 6.2E-24 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.2E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO0120 dfcc3e33ee9097e856e70e5f4bf905e3 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.2E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO0798 57d9061cc481929422c9cf91c7e35c75 386 PANTHER PTHR23501:SF4 1 385 1.3E-176 T 22-04-2016 YPO0798 57d9061cc481929422c9cf91c7e35c75 386 PANTHER PTHR23501 1 385 1.3E-176 T 22-04-2016 YPO0798 57d9061cc481929422c9cf91c7e35c75 386 Gene3D G3DSA:1.20.1250.20 5 188 4.2E-31 T 22-04-2016 YPO0798 57d9061cc481929422c9cf91c7e35c75 386 Gene3D G3DSA:1.20.1250.20 201 375 1.1E-10 T 22-04-2016 YPO0798 57d9061cc481929422c9cf91c7e35c75 386 SUPERFAMILY SSF103473 3 378 4.05E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0798 57d9061cc481929422c9cf91c7e35c75 386 Pfam PF07690 Major Facilitator Superfamily 8 313 1.4E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 Gene3D G3DSA:3.40.50.300 318 528 6.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 Gene3D G3DSA:3.40.50.300 2 270 2.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 Pfam PF12848 ABC transporter 224 309 1.4E-20 T 22-04-2016 IPR032781 ABC-transporter extension domain YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 Pfam PF00005 ABC transporter 18 184 1.6E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 Pfam PF00005 ABC transporter 336 467 4.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 PANTHER PTHR19211 2 527 0.0 T 22-04-2016 YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 SUPERFAMILY SSF52540 298 523 5.89E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 PANTHER PTHR19211:SF38 2 527 0.0 T 22-04-2016 YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 SMART SM00382 26 228 6.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 SMART SM00382 344 513 3.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1491 4f4edcac9eb12e646761c35fe7f56d5e 531 SUPERFAMILY SSF52540 6 237 3.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 SUPERFAMILY SSF53720 10 434 1.31E-86 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 10 430 40.978 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 4.5E-99 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 Pfam PF00815 Histidinol dehydrogenase 31 430 2.7E-165 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PANTHER PTHR21256:SF14 9 436 0.0 T 22-04-2016 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PANTHER PTHR21256 9 436 0.0 T 22-04-2016 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 PIRSF PIRSF000099 3 433 2.8E-167 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 429 2.9E-159 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YPO1548 cb24e7a1ad19c2a5b3ff5c4e5b40351b 443 Gene3D G3DSA:3.40.50.1980 33 243 4.4E-79 T 22-04-2016 YPO3368a 312328de8eb35b71dc240f5dbabd8b2f 66 SUPERFAMILY SSF54786 1 64 1.88E-11 T 22-04-2016 YPO3368a 312328de8eb35b71dc240f5dbabd8b2f 66 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 63 8.7E-13 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 YPO3368a 312328de8eb35b71dc240f5dbabd8b2f 66 Gene3D G3DSA:3.30.920.30 1 64 4.7E-13 T 22-04-2016 YPO1605 56bffd59c619bba6e5d8a3e2257added 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 2.2E-63 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YPO1605 56bffd59c619bba6e5d8a3e2257added 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.222 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YPO1605 56bffd59c619bba6e5d8a3e2257added 212 SUPERFAMILY SSF52540 1 208 1.71E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1605 56bffd59c619bba6e5d8a3e2257added 212 Pfam PF02223 Thymidylate kinase 8 198 3.1E-61 T 22-04-2016 YPO1605 56bffd59c619bba6e5d8a3e2257added 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YPO1605 56bffd59c619bba6e5d8a3e2257added 212 Gene3D G3DSA:3.40.50.300 3 207 1.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1605 56bffd59c619bba6e5d8a3e2257added 212 PANTHER PTHR10344 1 211 2.4E-75 T 22-04-2016 YPO1942 83ae588b10f82e5521806fef31f7d46f 175 Pfam PF10634 Fe2+ transport protein 25 173 3.8E-70 T 22-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type YPO1942 83ae588b10f82e5521806fef31f7d46f 175 PIRSF PIRSF017018 1 175 1.1E-73 T 22-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type YPO1545 a2fa9a1ce4429c35711945859813a95f 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 22-04-2016 YPO1545 a2fa9a1ce4429c35711945859813a95f 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 22-04-2016 YPO1545 a2fa9a1ce4429c35711945859813a95f 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 8.6E-70 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 YPO1545 a2fa9a1ce4429c35711945859813a95f 196 PANTHER PTHR21235:SF1 2 196 2.9E-92 T 22-04-2016 YPO1545 a2fa9a1ce4429c35711945859813a95f 196 PIRSF PIRSF000495 1 196 1.7E-63 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 YPO1545 a2fa9a1ce4429c35711945859813a95f 196 SUPERFAMILY SSF52317 3 195 4.28E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO1545 a2fa9a1ce4429c35711945859813a95f 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.404 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 YPO1545 a2fa9a1ce4429c35711945859813a95f 196 PANTHER PTHR21235 2 196 2.9E-92 T 22-04-2016 YPO1545 a2fa9a1ce4429c35711945859813a95f 196 Gene3D G3DSA:3.40.50.880 1 196 1.2E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO1545 a2fa9a1ce4429c35711945859813a95f 196 Pfam PF00117 Glutamine amidotransferase class-I 39 194 1.6E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPO1913 03506243c98f7fe00c29556a70d88629 600 PANTHER PTHR24222 14 596 0.0 T 22-04-2016 YPO1913 03506243c98f7fe00c29556a70d88629 600 Pfam PF00005 ABC transporter 360 509 3.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1913 03506243c98f7fe00c29556a70d88629 600 Gene3D G3DSA:3.40.50.300 341 573 9.6E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1913 03506243c98f7fe00c29556a70d88629 600 SUPERFAMILY SSF52540 337 579 1.41E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1913 03506243c98f7fe00c29556a70d88629 600 PANTHER PTHR24222:SF24 14 596 0.0 T 22-04-2016 YPO1913 03506243c98f7fe00c29556a70d88629 600 SMART SM00382 369 563 6.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1913 03506243c98f7fe00c29556a70d88629 600 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1913 03506243c98f7fe00c29556a70d88629 600 Pfam PF00664 ABC transporter transmembrane region 68 277 7.0E-21 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1913 03506243c98f7fe00c29556a70d88629 600 Gene3D G3DSA:1.20.1560.10 16 326 4.5E-34 T 22-04-2016 YPO1913 03506243c98f7fe00c29556a70d88629 600 SUPERFAMILY SSF90123 16 331 3.66E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO2216 75456db55a354ea596218c5ff0193008 348 PANTHER PTHR33209 2 348 1.1E-225 T 22-04-2016 YPO2216 75456db55a354ea596218c5ff0193008 348 Gene3D G3DSA:3.90.226.10 101 204 1.6E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2216 75456db55a354ea596218c5ff0193008 348 Gene3D G3DSA:3.90.226.10 270 300 1.6E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2216 75456db55a354ea596218c5ff0193008 348 SUPERFAMILY SSF52096 96 208 1.1E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2216 75456db55a354ea596218c5ff0193008 348 SUPERFAMILY SSF52096 239 298 1.1E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2216 75456db55a354ea596218c5ff0193008 348 Pfam PF01343 Peptidase family S49 160 304 3.4E-45 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YPO2216 75456db55a354ea596218c5ff0193008 348 PANTHER PTHR33209:SF2 2 348 1.1E-225 T 22-04-2016 YPO2216 75456db55a354ea596218c5ff0193008 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 2.4E-58 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 Pfam PF13505 Outer membrane protein beta-barrel domain 9 174 3.3E-22 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 Gene3D G3DSA:2.40.160.20 26 174 1.1E-40 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 SUPERFAMILY SSF56925 28 174 2.88E-30 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 162 173 1.0E-35 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 1.0E-35 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 135 156 1.0E-35 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 86 109 1.0E-35 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 PANTHER PTHR35892:SF3 2 174 3.5E-131 T 22-04-2016 YPO2506 7f3ec854cdb6e7a7b992eac27c39ae50 174 PANTHER PTHR35892 2 174 3.5E-131 T 22-04-2016 YPO0328 6762615a2813540dff1ca14d94ac42f7 274 Gene3D G3DSA:3.40.225.10 2 272 9.2E-102 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO0328 6762615a2813540dff1ca14d94ac42f7 274 SMART SM01007 11 239 1.7E-34 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO0328 6762615a2813540dff1ca14d94ac42f7 274 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 2.7E-143 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 YPO0328 6762615a2813540dff1ca14d94ac42f7 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 9.0E-39 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO0328 6762615a2813540dff1ca14d94ac42f7 274 SUPERFAMILY SSF53639 1 270 5.69E-75 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO0328 6762615a2813540dff1ca14d94ac42f7 274 PANTHER PTHR22789 68 272 4.4E-135 T 22-04-2016 YPO0328 6762615a2813540dff1ca14d94ac42f7 274 PANTHER PTHR22789 1 39 4.4E-135 T 22-04-2016 YPO0328 6762615a2813540dff1ca14d94ac42f7 274 PANTHER PTHR22789:SF4 68 272 4.4E-135 T 22-04-2016 YPO0328 6762615a2813540dff1ca14d94ac42f7 274 PANTHER PTHR22789:SF4 1 39 4.4E-135 T 22-04-2016 YPO0328 6762615a2813540dff1ca14d94ac42f7 274 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 58.712 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 YPO1614 95f0a3df1344efdb541d5cd9e252bb6f 268 Gene3D G3DSA:3.90.1200.10 51 250 1.3E-18 T 22-04-2016 YPO1614 95f0a3df1344efdb541d5cd9e252bb6f 268 SUPERFAMILY SSF56112 7 265 1.31E-36 T 22-04-2016 IPR011009 Protein kinase-like domain YPO1614 95f0a3df1344efdb541d5cd9e252bb6f 268 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 7 264 1.6E-108 T 22-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 YPO1614 95f0a3df1344efdb541d5cd9e252bb6f 268 Pfam PF01636 Phosphotransferase enzyme family 11 214 6.5E-16 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase YPO1064a 10ba1628845ff53e67d7bc89ac372e32 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.197 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 YPO1064a 10ba1628845ff53e67d7bc89ac372e32 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 1.0E-30 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 YPO1064a 10ba1628845ff53e67d7bc89ac372e32 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 6.1E-37 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 YPO3369 99ef893fbd44f0a2c54fbfe18291b61f 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 129 1.2E-28 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system YPO3369 99ef893fbd44f0a2c54fbfe18291b61f 135 Gene3D G3DSA:1.10.1220.10 95 133 5.9E-6 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YPO3369 99ef893fbd44f0a2c54fbfe18291b61f 135 SUPERFAMILY SSF143100 1 61 8.5E-14 T 22-04-2016 YPO3369 99ef893fbd44f0a2c54fbfe18291b61f 135 PANTHER PTHR34873 1 135 1.0E-68 T 22-04-2016 YPO3369 99ef893fbd44f0a2c54fbfe18291b61f 135 PANTHER PTHR34873:SF2 1 135 1.0E-68 T 22-04-2016 YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 Gene3D G3DSA:3.40.50.1220 193 356 2.9E-56 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 SUPERFAMILY SSF52467 191 355 6.91E-54 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 PANTHER PTHR18968 1 560 0.0 T 22-04-2016 YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 Gene3D G3DSA:3.40.50.970 6 181 1.0E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 424 443 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 2.9E-59 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 331 3.4E-40 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 535 5.3E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 Gene3D G3DSA:3.40.50.970 359 557 1.1E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 SUPERFAMILY SSF52518 362 557 2.08E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 SUPERFAMILY SSF52518 5 182 1.39E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 PANTHER PTHR18968:SF128 1 560 0.0 T 22-04-2016 YPO2293 ce37d319fe88b494ff9c2bca0c0c5471 560 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 9 558 5.0E-196 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO1648 c17e6c49f28ca6e1cf8975baaecfeff6 441 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 36 50 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site YPO1648 c17e6c49f28ca6e1cf8975baaecfeff6 441 PANTHER PTHR41972 2 441 5.3E-215 T 22-04-2016 YPO1648 c17e6c49f28ca6e1cf8975baaecfeff6 441 Gene3D G3DSA:3.40.50.1240 289 441 5.4E-72 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO1648 c17e6c49f28ca6e1cf8975baaecfeff6 441 Gene3D G3DSA:3.40.50.1240 31 145 5.4E-72 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO1648 c17e6c49f28ca6e1cf8975baaecfeff6 441 SUPERFAMILY SSF53254 31 438 1.14E-67 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO1648 c17e6c49f28ca6e1cf8975baaecfeff6 441 Gene3D G3DSA:3.40.50.1240 146 286 2.3E-42 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO1648 c17e6c49f28ca6e1cf8975baaecfeff6 441 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 35 381 3.2E-19 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 Gene3D G3DSA:1.10.10.10 156 209 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 SUPERFAMILY SSF52172 2 131 3.98E-30 T 22-04-2016 IPR011006 CheY-like superfamily YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 Pfam PF00072 Response regulator receiver domain 5 113 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 PANTHER PTHR26402 3 201 1.1E-79 T 22-04-2016 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 Gene3D G3DSA:3.40.50.2300 3 155 3.7E-32 T 22-04-2016 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 3.8E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 SUPERFAMILY SSF46894 141 210 1.36E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 SMART SM00448 3 116 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 SMART SM00421 147 204 7.7E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO1925 9d0d4ba5fd6b102f32603f191face3f8 210 PANTHER PTHR26402:SF405 3 201 1.1E-79 T 22-04-2016 YPO1971 891d15b1e778f1b8f668518ac32d27c6 268 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 6 265 2.6E-128 T 22-04-2016 IPR010247 N-formylglutamate deformylase YPO1971 891d15b1e778f1b8f668518ac32d27c6 268 Pfam PF05013 N-formylglutamate amidohydrolase 15 232 1.6E-63 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase YPO1971 891d15b1e778f1b8f668518ac32d27c6 268 SUPERFAMILY SSF53187 5 264 7.95E-76 T 22-04-2016 YPO1971 891d15b1e778f1b8f668518ac32d27c6 268 Gene3D G3DSA:3.40.630.40 6 265 9.2E-86 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YPO1698 cd525246acfb7510c59e5f98aab48190 185 PANTHER PTHR37089 1 185 2.4E-111 T 22-04-2016 YPO1698 cd525246acfb7510c59e5f98aab48190 185 Pfam PF05229 Spore Coat Protein U domain 34 182 1.4E-28 T 22-04-2016 IPR007893 Spore coat protein U YPO1698 cd525246acfb7510c59e5f98aab48190 185 SMART SM00972 122 182 5.1E-15 T 22-04-2016 IPR007893 Spore coat protein U YPO1698 cd525246acfb7510c59e5f98aab48190 185 PANTHER PTHR37089:SF3 1 185 2.4E-111 T 22-04-2016 YPO3517 bb5f92968a2333c97a258788359e8563 156 Gene3D G3DSA:3.30.1360.40 80 154 3.0E-25 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YPO3517 bb5f92968a2333c97a258788359e8563 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 4.8E-21 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 YPO3517 bb5f92968a2333c97a258788359e8563 156 PANTHER PTHR34471:SF1 2 156 2.7E-68 T 22-04-2016 YPO3517 bb5f92968a2333c97a258788359e8563 156 SUPERFAMILY SSF46785 3 77 8.98E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3517 bb5f92968a2333c97a258788359e8563 156 Gene3D G3DSA:1.10.10.10 2 77 8.3E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3517 bb5f92968a2333c97a258788359e8563 156 SUPERFAMILY SSF55252 82 151 2.88E-18 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 YPO3517 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPO3517 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPO3517 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPO3517 bb5f92968a2333c97a258788359e8563 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPO3517 bb5f92968a2333c97a258788359e8563 156 PANTHER PTHR34471 2 156 2.7E-68 T 22-04-2016 YPO3517 bb5f92968a2333c97a258788359e8563 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.096 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPO3517 bb5f92968a2333c97a258788359e8563 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 151 1.7E-45 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YPO3517 bb5f92968a2333c97a258788359e8563 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 2.0E-31 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 YPO3517 bb5f92968a2333c97a258788359e8563 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.2E-25 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 YPO0731 2b988770c3fbb4269f6cfe5f3d57d932 97 Pfam PF10135 Rod binding protein 42 93 1.0E-11 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal YPO2817 74953bd31c43734babcc5e7184132fb5 200 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 94 1.5E-10 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YPO3437 ccec3c4e43bfa06a6694479a0cad3eed 636 PANTHER PTHR35149 9 632 3.8E-195 T 22-04-2016 YPO3437 ccec3c4e43bfa06a6694479a0cad3eed 636 Pfam PF07510 Protein of unknown function (DUF1524) 499 572 1.8E-7 T 22-04-2016 IPR011089 Domain of unknown function DUF1524 YPO3437 ccec3c4e43bfa06a6694479a0cad3eed 636 PANTHER PTHR35149:SF2 9 632 3.8E-195 T 22-04-2016 YPO3437 ccec3c4e43bfa06a6694479a0cad3eed 636 Pfam PF03235 Protein of unknown function DUF262 24 241 3.8E-32 T 22-04-2016 IPR004919 Domain of unknown function DUF262 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PANTHER PTHR22912 1 461 1.6E-297 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 Gene3D G3DSA:3.50.50.60 6 145 2.1E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.7E-52 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.7E-52 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.7E-52 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.7E-52 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.7E-52 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.7E-52 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.7E-52 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.7E-52 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.7E-52 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 66.793 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 Gene3D G3DSA:3.50.50.60 146 334 2.7E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.5E-27 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 7.5E-27 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 7.5E-27 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 7.5E-27 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 7.5E-27 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 SUPERFAMILY SSF51905 1 322 1.04E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 1.4E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 SUPERFAMILY SSF55424 345 463 2.06E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PANTHER PTHR22912:SF93 1 461 1.6E-297 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 3.1E-30 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 PIRSF PIRSF000350 1 463 1.2E-71 T 22-04-2016 YPO3914 b575532597b8ef84ae3f564c1c9bbd41 466 Gene3D G3DSA:3.30.390.30 345 460 2.7E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO0800 9fc8efa7af9961a95e193f9a662cbd88 295 SUPERFAMILY SSF56281 26 251 6.09E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO0800 9fc8efa7af9961a95e193f9a662cbd88 295 PANTHER PTHR11935 1 295 2.4E-112 T 22-04-2016 YPO0800 9fc8efa7af9961a95e193f9a662cbd88 295 Gene3D G3DSA:3.60.15.10 33 254 1.6E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO0800 9fc8efa7af9961a95e193f9a662cbd88 295 Pfam PF00753 Metallo-beta-lactamase superfamily 44 228 4.4E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO0800 9fc8efa7af9961a95e193f9a662cbd88 295 SMART SM00849 43 228 3.1E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO0800 9fc8efa7af9961a95e193f9a662cbd88 295 PANTHER PTHR11935:SF5 1 295 2.4E-112 T 22-04-2016 YPO1538 38a4926447de61da56d594016f496c56 604 PANTHER PTHR34384 8 604 0.0 T 22-04-2016 YPO1538 38a4926447de61da56d594016f496c56 604 Pfam PF04183 IucA / IucC family 150 399 1.5E-75 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 YPO1538 38a4926447de61da56d594016f496c56 604 Pfam PF06276 Ferric iron reductase FhuF-like transporter 421 578 3.2E-38 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YPO1538 38a4926447de61da56d594016f496c56 604 PANTHER PTHR34384:SF5 8 604 0.0 T 22-04-2016 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:1.10.10.60 343 392 3.1E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 SUPERFAMILY SSF46689 343 392 2.8E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 Pfam PF13377 Periplasmic binding protein-like domain 113 282 1.5E-32 T 22-04-2016 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 373 389 5.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 358 373 5.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 Pfam PF12833 Helix-turn-helix domain 314 389 2.2E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 PANTHER PTHR30146 8 325 1.4E-186 T 22-04-2016 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 SUPERFAMILY SSF46689 289 337 2.02E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:3.40.50.2300 58 110 8.4E-4 T 22-04-2016 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 PANTHER PTHR30146:SF24 8 325 1.4E-186 T 22-04-2016 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 SUPERFAMILY SSF53822 10 304 1.69E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:1.10.10.60 288 339 8.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 343 385 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 SMART SM00342 306 389 6.3E-29 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO4034 cb51826e6fa41ca594d57d8e7ff1e841 397 Gene3D G3DSA:3.40.50.2300 111 282 3.1E-26 T 22-04-2016 YPO3865 5890be902ee52718f65765c1654ec87f 353 Gene3D G3DSA:3.30.1890.10 56 224 1.3E-88 T 22-04-2016 YPO3865 5890be902ee52718f65765c1654ec87f 353 Gene3D G3DSA:3.30.1890.10 260 321 1.3E-88 T 22-04-2016 YPO3865 5890be902ee52718f65765c1654ec87f 353 SUPERFAMILY SSF160355 56 321 1.57E-82 T 22-04-2016 YPO3865 5890be902ee52718f65765c1654ec87f 353 Pfam PF02706 Chain length determinant protein 17 95 1.8E-12 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 YPO3865 5890be902ee52718f65765c1654ec87f 353 PANTHER PTHR32309:SF16 1 353 8.6E-260 T 22-04-2016 YPO3865 5890be902ee52718f65765c1654ec87f 353 PANTHER PTHR32309 1 353 8.6E-260 T 22-04-2016 YPO3865 5890be902ee52718f65765c1654ec87f 353 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 10 350 56.958 T 22-04-2016 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 UniPathway: UPA00566 YPO2725 f49a359f49106fbec030bd75cd2d909c 921 SUPERFAMILY SSF69279 211 382 2.04E-34 T 22-04-2016 YPO2725 f49a359f49106fbec030bd75cd2d909c 921 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 25 522 1.2E-118 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO2725 f49a359f49106fbec030bd75cd2d909c 921 PANTHER PTHR32305 4 676 0.0 T 22-04-2016 YPO2725 f49a359f49106fbec030bd75cd2d909c 921 Gene3D G3DSA:2.40.50.230 388 470 1.5E-37 T 22-04-2016 IPR006531 Gp5 N-terminal YPO2725 f49a359f49106fbec030bd75cd2d909c 921 SUPERFAMILY SSF69255 382 470 5.23E-32 T 22-04-2016 YPO2725 f49a359f49106fbec030bd75cd2d909c 921 PANTHER PTHR32305:SF9 4 676 0.0 T 22-04-2016 YPO2725 f49a359f49106fbec030bd75cd2d909c 921 Gene3D G3DSA:3.55.50.10 117 208 4.2E-32 T 22-04-2016 YPO2725 f49a359f49106fbec030bd75cd2d909c 921 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 17 539 3.6E-154 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO2725 f49a359f49106fbec030bd75cd2d909c 921 Pfam PF05954 Phage late control gene D protein (GPD) 29 346 3.4E-87 T 22-04-2016 YPO2725 f49a359f49106fbec030bd75cd2d909c 921 SUPERFAMILY SSF69349 460 667 1.02E-43 T 22-04-2016 YPO2725 f49a359f49106fbec030bd75cd2d909c 921 SUPERFAMILY SSF69279 17 203 4.68E-50 T 22-04-2016 YPO1600 6921b6e3b114446f07f2df933b9c9d46 78 Gene3D G3DSA:1.10.1200.10 3 77 4.5E-35 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1600 6921b6e3b114446f07f2df933b9c9d46 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 3.9E-37 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YPO1600 6921b6e3b114446f07f2df933b9c9d46 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YPO1600 6921b6e3b114446f07f2df933b9c9d46 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.003 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YPO1600 6921b6e3b114446f07f2df933b9c9d46 78 PANTHER PTHR20863 4 78 2.1E-31 T 22-04-2016 YPO1600 6921b6e3b114446f07f2df933b9c9d46 78 SUPERFAMILY SSF47336 2 76 1.09E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1600 6921b6e3b114446f07f2df933b9c9d46 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.3E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1600 6921b6e3b114446f07f2df933b9c9d46 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.174 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YPO2167 20b52da652f96112cd05929ed2250354 128 PRINTS PR00502 NUDIX hydrolase family signature 44 59 3.4E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YPO2167 20b52da652f96112cd05929ed2250354 128 PRINTS PR00502 NUDIX hydrolase family signature 30 44 3.4E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YPO2167 20b52da652f96112cd05929ed2250354 128 Pfam PF00293 NUDIX domain 4 120 4.1E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO2167 20b52da652f96112cd05929ed2250354 128 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPO2167 20b52da652f96112cd05929ed2250354 128 SUPERFAMILY SSF55811 3 124 3.38E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO2167 20b52da652f96112cd05929ed2250354 128 PANTHER PTHR22769:SF35 1 128 1.6E-39 T 22-04-2016 YPO2167 20b52da652f96112cd05929ed2250354 128 Gene3D G3DSA:3.90.79.10 3 127 1.6E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO2167 20b52da652f96112cd05929ed2250354 128 PANTHER PTHR22769 1 128 1.6E-39 T 22-04-2016 YPO1627 c389437d5dc8354c03c2a392c4a25074 234 PANTHER PTHR24220 8 231 5.1E-132 T 22-04-2016 YPO1627 c389437d5dc8354c03c2a392c4a25074 234 Gene3D G3DSA:3.40.50.300 5 227 2.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1627 c389437d5dc8354c03c2a392c4a25074 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1627 c389437d5dc8354c03c2a392c4a25074 234 SMART SM00382 35 230 5.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1627 c389437d5dc8354c03c2a392c4a25074 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 6.0E-110 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 YPO1627 c389437d5dc8354c03c2a392c4a25074 234 SUPERFAMILY SSF52540 6 226 6.34E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1627 c389437d5dc8354c03c2a392c4a25074 234 Pfam PF00005 ABC transporter 26 174 8.8E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1627 c389437d5dc8354c03c2a392c4a25074 234 PANTHER PTHR24220:SF111 8 231 5.1E-132 T 22-04-2016 YPO1460 d796f9caa36a7b0b02d9aeb24812e914 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1460 d796f9caa36a7b0b02d9aeb24812e914 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1460 d796f9caa36a7b0b02d9aeb24812e914 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1460 d796f9caa36a7b0b02d9aeb24812e914 262 PANTHER PTHR24322 154 183 3.0E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1460 d796f9caa36a7b0b02d9aeb24812e914 262 PANTHER PTHR24322 12 138 3.0E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1460 d796f9caa36a7b0b02d9aeb24812e914 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 241 2.1E-32 T 22-04-2016 YPO1460 d796f9caa36a7b0b02d9aeb24812e914 262 Gene3D G3DSA:3.40.50.720 2 244 3.8E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1460 d796f9caa36a7b0b02d9aeb24812e914 262 SUPERFAMILY SSF51735 9 243 1.4E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2363 d9d73f2f3a8fb224dd8350383e4f796a 87 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 87 5.0E-44 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD YPO2363 d9d73f2f3a8fb224dd8350383e4f796a 87 Pfam PF11656 YjbD family (DUF3811) 1 87 6.7E-39 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PANTHER PTHR34501 2 371 7.1E-278 T 22-04-2016 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 282 301 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 242 259 8.0E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 Pfam PF00267 Gram-negative porin 27 371 4.1E-144 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 326 343 4.9E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 PANTHER PTHR34501:SF3 2 371 7.1E-278 T 22-04-2016 YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 Gene3D G3DSA:2.40.160.10 22 371 5.6E-105 T 22-04-2016 IPR023614 Porin domain YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 326 342 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site YPO1205 714d46f05f8dc4e3d6c10fd2dd3724f6 371 SUPERFAMILY SSF56935 22 371 7.85E-80 T 22-04-2016 YPO1002 bf738be4a9e5bd9886c91ec75bca533d 496 Pfam PF07906 ShET2 enterotoxin, N-terminal region 8 294 2.3E-109 T 22-04-2016 IPR012927 ShET2 enterotoxin, N-terminal YPO1907 a5a207873243aed0db6eba4ea3176e91 525 PANTHER PTHR24095 15 519 4.1E-264 T 22-04-2016 YPO1907 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:3.30.300.30 417 519 6.0E-26 T 22-04-2016 YPO1907 a5a207873243aed0db6eba4ea3176e91 525 Pfam PF00501 AMP-binding enzyme 21 422 2.9E-78 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO1907 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:2.30.38.10 341 416 8.7E-22 T 22-04-2016 YPO1907 a5a207873243aed0db6eba4ea3176e91 525 PANTHER PTHR24095:SF123 15 519 4.1E-264 T 22-04-2016 YPO1907 a5a207873243aed0db6eba4ea3176e91 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 1.3E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YPO1907 a5a207873243aed0db6eba4ea3176e91 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO1907 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:3.40.50.980 16 178 2.8E-25 T 22-04-2016 YPO1907 a5a207873243aed0db6eba4ea3176e91 525 SUPERFAMILY SSF56801 10 518 6.67E-126 T 22-04-2016 YPO1907 a5a207873243aed0db6eba4ea3176e91 525 Gene3D G3DSA:3.40.50.980 179 330 2.9E-37 T 22-04-2016 YPO3814 808bfb429d467e00876cd0ac448714c5 541 SMART SM00962 337 538 1.3E-122 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3814 808bfb429d467e00876cd0ac448714c5 541 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 266 537 4.3E-115 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YPO3814 808bfb429d467e00876cd0ac448714c5 541 Gene3D G3DSA:3.40.50.300 335 537 3.3E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3814 808bfb429d467e00876cd0ac448714c5 541 PANTHER PTHR11564 233 541 3.6E-155 T 22-04-2016 YPO3814 808bfb429d467e00876cd0ac448714c5 541 SMART SM00963 243 323 2.1E-24 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3814 808bfb429d467e00876cd0ac448714c5 541 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 511 524 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3814 808bfb429d467e00876cd0ac448714c5 541 SUPERFAMILY SSF52540 334 537 6.46E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3814 808bfb429d467e00876cd0ac448714c5 541 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 266 538 65.048 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YPO3814 808bfb429d467e00876cd0ac448714c5 541 Pfam PF00448 SRP54-type protein, GTPase domain 338 537 1.2E-77 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3814 808bfb429d467e00876cd0ac448714c5 541 PANTHER PTHR11564:SF16 233 541 3.6E-155 T 22-04-2016 YPO3814 808bfb429d467e00876cd0ac448714c5 541 Gene3D G3DSA:1.20.120.140 228 319 2.5E-35 T 22-04-2016 YPO3814 808bfb429d467e00876cd0ac448714c5 541 SMART SM00382 336 516 6.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3814 808bfb429d467e00876cd0ac448714c5 541 Pfam PF02881 SRP54-type protein, helical bundle domain 254 319 1.1E-12 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3814 808bfb429d467e00876cd0ac448714c5 541 SUPERFAMILY SSF47364 238 317 3.79E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YPO3669 37a7c4ae82595842376d59ffc0d4ec24 489 Pfam PF00575 S1 RNA binding domain 38 109 3.1E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO3669 37a7c4ae82595842376d59ffc0d4ec24 489 Pfam PF10150 Ribonuclease E/G family 124 393 4.1E-101 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 YPO3669 37a7c4ae82595842376d59ffc0d4ec24 489 SUPERFAMILY SSF50249 39 128 6.0E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3669 37a7c4ae82595842376d59ffc0d4ec24 489 Gene3D G3DSA:2.40.50.140 30 128 2.0E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3669 37a7c4ae82595842376d59ffc0d4ec24 489 PANTHER PTHR30001 1 489 9.6E-229 T 22-04-2016 YPO3669 37a7c4ae82595842376d59ffc0d4ec24 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.9E-174 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 YPO3669 37a7c4ae82595842376d59ffc0d4ec24 489 SMART SM00316 37 122 2.1E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO0245a f151b14fb5936779bf5b47ff4944e129 190 SUPERFAMILY SSF55821 10 186 5.8E-54 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPO0245a f151b14fb5936779bf5b47ff4944e129 190 Gene3D G3DSA:3.90.870.10 3 190 8.1E-53 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPO0245a f151b14fb5936779bf5b47ff4944e129 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 41.278 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 YPO0245a f151b14fb5936779bf5b47ff4944e129 190 PANTHER PTHR17490 1 185 1.3E-116 T 22-04-2016 YPO0245a f151b14fb5936779bf5b47ff4944e129 190 Pfam PF01300 Telomere recombination 16 182 3.0E-42 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YPO0245a f151b14fb5936779bf5b47ff4944e129 190 PANTHER PTHR17490:SF8 1 185 1.3E-116 T 22-04-2016 YPO2584 6855a03ea4e0db2b2ec16f19a1b49811 377 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 258 5.0E-6 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 YPO2584 6855a03ea4e0db2b2ec16f19a1b49811 377 PANTHER PTHR22604:SF123 1 376 1.4E-98 T 22-04-2016 YPO2584 6855a03ea4e0db2b2ec16f19a1b49811 377 Gene3D G3DSA:3.40.50.720 1 149 6.8E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2584 6855a03ea4e0db2b2ec16f19a1b49811 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 1.5E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPO2584 6855a03ea4e0db2b2ec16f19a1b49811 377 SUPERFAMILY SSF51735 4 158 2.01E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2584 6855a03ea4e0db2b2ec16f19a1b49811 377 PANTHER PTHR22604 1 376 1.4E-98 T 22-04-2016 YPO2584 6855a03ea4e0db2b2ec16f19a1b49811 377 Gene3D G3DSA:3.30.360.10 150 277 4.4E-42 T 22-04-2016 YPO2584 6855a03ea4e0db2b2ec16f19a1b49811 377 Gene3D G3DSA:3.30.360.10 325 375 4.4E-42 T 22-04-2016 YPO2584 6855a03ea4e0db2b2ec16f19a1b49811 377 SUPERFAMILY SSF55347 135 323 6.87E-33 T 22-04-2016 YPO2825 48efc81959648d98ca3bb328f093a5db 70 PANTHER PTHR32319 8 68 2.2E-27 T 22-04-2016 YPO2825 48efc81959648d98ca3bb328f093a5db 70 Gene3D G3DSA:3.10.290.10 5 68 7.0E-25 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO2825 48efc81959648d98ca3bb328f093a5db 70 SUPERFAMILY SSF55174 6 69 7.2E-19 T 22-04-2016 YPO2825 48efc81959648d98ca3bb328f093a5db 70 Pfam PF13275 S4 domain 8 68 4.9E-22 T 22-04-2016 YPO2070 22be9c7a9fae2741bf230cf90f43673a 114 Pfam PF01042 Endoribonuclease L-PSP 4 113 1.8E-25 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO2070 22be9c7a9fae2741bf230cf90f43673a 114 Gene3D G3DSA:3.30.1330.40 6 114 1.6E-20 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO2070 22be9c7a9fae2741bf230cf90f43673a 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 22-04-2016 IPR019897 RidA, conserved site YPO2070 22be9c7a9fae2741bf230cf90f43673a 114 SUPERFAMILY SSF55298 2 114 1.32E-26 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO2070 22be9c7a9fae2741bf230cf90f43673a 114 PANTHER PTHR11803:SF11 1 114 3.5E-33 T 22-04-2016 YPO2070 22be9c7a9fae2741bf230cf90f43673a 114 PANTHER PTHR11803 1 114 3.5E-33 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO3315 dbec16b6eb5d2cfcec8866f17f70e536 381 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 340 1.9E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3315 dbec16b6eb5d2cfcec8866f17f70e536 381 PANTHER PTHR32196:SF21 1 364 5.4E-144 T 22-04-2016 YPO3315 dbec16b6eb5d2cfcec8866f17f70e536 381 PANTHER PTHR32196 1 364 5.4E-144 T 22-04-2016 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 PANTHER PTHR10799 892 968 3.3E-267 T 22-04-2016 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 PANTHER PTHR10799 150 354 3.3E-267 T 22-04-2016 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 PANTHER PTHR10799 399 694 3.3E-267 T 22-04-2016 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 PANTHER PTHR10799 799 840 3.3E-267 T 22-04-2016 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 4.4E-19 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 Gene3D G3DSA:3.40.50.300 483 623 4.0E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 SMART SM00487 150 342 9.0E-22 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 Pfam PF00271 Helicase conserved C-terminal domain 492 601 4.3E-14 T 22-04-2016 IPR001650 Helicase, C-terminal YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 6.9E-157 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 Gene3D G3DSA:3.40.50.300 154 322 2.7E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 SMART SM00490 517 601 4.9E-15 T 22-04-2016 IPR001650 Helicase, C-terminal YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 SUPERFAMILY SSF52540 480 644 3.35E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 SUPERFAMILY SSF52540 273 337 3.35E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 SUPERFAMILY SSF52540 125 377 2.84E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 PANTHER PTHR10799:SF610 892 968 3.3E-267 T 22-04-2016 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 PANTHER PTHR10799:SF610 150 354 3.3E-267 T 22-04-2016 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 PANTHER PTHR10799:SF610 399 694 3.3E-267 T 22-04-2016 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 PANTHER PTHR10799:SF610 799 840 3.3E-267 T 22-04-2016 YPO0517 cab1837e6bcef9dbff1316c46b3e7ed0 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 70.917 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 YPO3023 214506977241ed50572c8e0563b6f3e2 233 PANTHER PTHR36204 1 232 3.2E-120 T 22-04-2016 YPO3023 214506977241ed50572c8e0563b6f3e2 233 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 33 224 1.4E-81 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 YPO3023 214506977241ed50572c8e0563b6f3e2 233 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 9 223 38.38 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 YPO3023 214506977241ed50572c8e0563b6f3e2 233 PANTHER PTHR36204:SF1 1 232 3.2E-120 T 22-04-2016 YPO3023 214506977241ed50572c8e0563b6f3e2 233 Gene3D G3DSA:3.20.20.70 5 225 7.5E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3023 214506977241ed50572c8e0563b6f3e2 233 SUPERFAMILY SSF51366 11 222 1.98E-53 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPO1530 1a89ca063a371927abda7ee26095a37a 432 SUPERFAMILY SSF51905 1 254 2.8E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1530 1a89ca063a371927abda7ee26095a37a 432 PANTHER PTHR23024 45 142 7.3E-64 T 22-04-2016 YPO1530 1a89ca063a371927abda7ee26095a37a 432 Gene3D G3DSA:3.50.50.60 272 315 0.001 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1530 1a89ca063a371927abda7ee26095a37a 432 Gene3D G3DSA:3.50.50.60 151 228 0.001 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1530 1a89ca063a371927abda7ee26095a37a 432 Gene3D G3DSA:3.50.50.60 336 379 2.0E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1530 1a89ca063a371927abda7ee26095a37a 432 Gene3D G3DSA:3.50.50.60 89 150 2.0E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1530 1a89ca063a371927abda7ee26095a37a 432 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 339 1.4E-117 T 22-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPO1530 1a89ca063a371927abda7ee26095a37a 432 PANTHER PTHR23024:SF215 45 142 7.3E-64 T 22-04-2016 YPO1610 a14b275df4ef49dca64394f4047a5b54 272 PANTHER PTHR21089:SF9 1 271 6.0E-193 T 22-04-2016 YPO1610 a14b275df4ef49dca64394f4047a5b54 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 4.1E-16 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO1610 a14b275df4ef49dca64394f4047a5b54 272 Gene3D G3DSA:3.40.50.720 111 267 1.7E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1610 a14b275df4ef49dca64394f4047a5b54 272 SUPERFAMILY SSF53223 7 105 1.32E-26 T 22-04-2016 YPO1610 a14b275df4ef49dca64394f4047a5b54 272 PANTHER PTHR21089 1 271 6.0E-193 T 22-04-2016 YPO1610 a14b275df4ef49dca64394f4047a5b54 272 Gene3D G3DSA:3.40.192.10 25 110 9.4E-28 T 22-04-2016 YPO1610 a14b275df4ef49dca64394f4047a5b54 272 SUPERFAMILY SSF51735 106 266 2.01E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 Pfam PF00005 ABC transporter 278 433 1.5E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 Pfam PF00005 ABC transporter 20 171 1.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 Gene3D G3DSA:3.40.50.300 252 502 8.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 SUPERFAMILY SSF52540 3 229 9.67E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 PANTHER PTHR24220 6 387 3.3E-228 T 22-04-2016 YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 SMART SM00382 286 482 1.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 SMART SM00382 29 219 6.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 PANTHER PTHR24220:SF392 6 387 3.3E-228 T 22-04-2016 YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 SUPERFAMILY SSF52540 243 485 2.57E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 Gene3D G3DSA:3.40.50.300 3 234 6.4E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4036 8a84eca6c013c4ccf00cf4179f794552 510 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 1.7E-264 T 22-04-2016 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 YPO3715 e63306744231a45596e6ecdaae9129d5 525 SUPERFAMILY SSF161098 272 514 7.06E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3715 e63306744231a45596e6ecdaae9129d5 525 Gene3D G3DSA:3.10.650.10 206 279 3.7E-36 T 22-04-2016 YPO3715 e63306744231a45596e6ecdaae9129d5 525 PANTHER PTHR30193:SF22 45 113 5.0E-151 T 22-04-2016 YPO3715 e63306744231a45596e6ecdaae9129d5 525 PANTHER PTHR30193:SF22 270 523 5.0E-151 T 22-04-2016 YPO3715 e63306744231a45596e6ecdaae9129d5 525 SUPERFAMILY SSF160964 23 271 8.63E-83 T 22-04-2016 YPO3715 e63306744231a45596e6ecdaae9129d5 525 Gene3D G3DSA:1.10.3720.10 286 521 6.3E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3715 e63306744231a45596e6ecdaae9129d5 525 Gene3D G3DSA:1.20.58.370 11 103 2.2E-38 T 22-04-2016 YPO3715 e63306744231a45596e6ecdaae9129d5 525 Gene3D G3DSA:2.40.430.10 126 205 9.5E-32 T 22-04-2016 YPO3715 e63306744231a45596e6ecdaae9129d5 525 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 108 271 4.5E-62 T 22-04-2016 IPR029345 Maltose transport system permease protein MalF, P2 domain YPO3715 e63306744231a45596e6ecdaae9129d5 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 308 512 7.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3715 e63306744231a45596e6ecdaae9129d5 525 PANTHER PTHR30193 45 113 5.0E-151 T 22-04-2016 YPO3715 e63306744231a45596e6ecdaae9129d5 525 PANTHER PTHR30193 270 523 5.0E-151 T 22-04-2016 YPO3473 89d00783a63b5ead1f07f0975377be2e 408 Gene3D G3DSA:1.50.10.110 56 376 3.6E-68 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPO3473 89d00783a63b5ead1f07f0975377be2e 408 SUPERFAMILY SSF48230 80 359 9.15E-47 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YPO3473 89d00783a63b5ead1f07f0975377be2e 408 PANTHER PTHR41379 1 408 2.1E-178 T 22-04-2016 YPO3473 89d00783a63b5ead1f07f0975377be2e 408 PANTHER PTHR41379:SF1 1 408 2.1E-178 T 22-04-2016 YPO3473 89d00783a63b5ead1f07f0975377be2e 408 Pfam PF05426 Alginate lyase 73 352 2.7E-71 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPO0893 556bdf97d8616664df34617ba1a6bcca 172 SUPERFAMILY SSF52218 1 166 4.66E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO0893 556bdf97d8616664df34617ba1a6bcca 172 PIRSF PIRSF038996 1 171 3.4E-55 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YPO0893 556bdf97d8616664df34617ba1a6bcca 172 Pfam PF00258 Flavodoxin 5 160 5.4E-27 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPO0893 556bdf97d8616664df34617ba1a6bcca 172 PANTHER PTHR19384:SF73 1 119 3.1E-78 T 22-04-2016 YPO0893 556bdf97d8616664df34617ba1a6bcca 172 PANTHER PTHR19384:SF73 141 168 3.1E-78 T 22-04-2016 YPO0893 556bdf97d8616664df34617ba1a6bcca 172 Gene3D G3DSA:3.40.50.360 1 168 1.2E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO0893 556bdf97d8616664df34617ba1a6bcca 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 2.5E-73 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YPO0893 556bdf97d8616664df34617ba1a6bcca 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YPO0893 556bdf97d8616664df34617ba1a6bcca 172 PANTHER PTHR19384 1 119 3.1E-78 T 22-04-2016 YPO0893 556bdf97d8616664df34617ba1a6bcca 172 PANTHER PTHR19384 141 168 3.1E-78 T 22-04-2016 YPO0362 53ccdaf13b1003d691aae5f34d970a6c 325 PANTHER PTHR22594:SF7 14 322 3.5E-159 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YPO0362 53ccdaf13b1003d691aae5f34d970a6c 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.5E-129 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YPO0362 53ccdaf13b1003d691aae5f34d970a6c 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.575 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YPO0362 53ccdaf13b1003d691aae5f34d970a6c 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 5.9E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPO0362 53ccdaf13b1003d691aae5f34d970a6c 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 5.9E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPO0362 53ccdaf13b1003d691aae5f34d970a6c 325 PANTHER PTHR22594 14 322 3.5E-159 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0362 53ccdaf13b1003d691aae5f34d970a6c 325 SUPERFAMILY SSF55681 13 322 5.36E-82 T 22-04-2016 YPO0362 53ccdaf13b1003d691aae5f34d970a6c 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 322 1.9E-45 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0362 53ccdaf13b1003d691aae5f34d970a6c 325 Gene3D G3DSA:3.30.930.10 14 321 3.5E-71 T 22-04-2016 YPO1782 602f1f560b63794d563a2da21eb67472 76 Gene3D G3DSA:1.10.1110.10 1 76 2.2E-40 T 22-04-2016 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO1782 602f1f560b63794d563a2da21eb67472 76 SUPERFAMILY SSF46575 1 76 9.94E-36 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YPO1782 602f1f560b63794d563a2da21eb67472 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 4 76 6.0E-36 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YPO1782 602f1f560b63794d563a2da21eb67472 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 5.8E-38 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YPO2539 bfb4de095e29af668926d5e374f5295b 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO2539 bfb4de095e29af668926d5e374f5295b 254 Pfam PF00106 short chain dehydrogenase 11 203 2.4E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PANTHER PTHR24322 14 142 4.8E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PANTHER PTHR24322 158 190 4.8E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 SUPERFAMILY SSF51735 8 252 2.46E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2539 bfb4de095e29af668926d5e374f5295b 254 Gene3D G3DSA:3.40.50.720 4 252 2.6E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2539 bfb4de095e29af668926d5e374f5295b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.003376E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.003376E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.003376E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.003376E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.003376E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.003376E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PANTHER PTHR24322:SF459 14 142 4.8E-57 T 22-04-2016 YPO2539 bfb4de095e29af668926d5e374f5295b 254 PANTHER PTHR24322:SF459 158 190 4.8E-57 T 22-04-2016 YPO2539 bfb4de095e29af668926d5e374f5295b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.868709E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.868709E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2539 bfb4de095e29af668926d5e374f5295b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.868709E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3036 535f66bae270960edddd1b460edc254f 200 PANTHER PTHR30333 2 200 7.9E-116 T 22-04-2016 YPO3036 535f66bae270960edddd1b460edc254f 200 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 11 194 2.0E-105 T 22-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 YPO3036 535f66bae270960edddd1b460edc254f 200 SUPERFAMILY SSF48695 17 196 5.03E-64 T 22-04-2016 IPR011031 Multihaem cytochrome YPO3036 535f66bae270960edddd1b460edc254f 200 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 22 193 3.3E-78 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal YPO3036 535f66bae270960edddd1b460edc254f 200 Gene3D G3DSA:1.10.3820.10 19 193 1.4E-27 T 22-04-2016 YPO3036 535f66bae270960edddd1b460edc254f 200 PANTHER PTHR30333:SF1 2 200 7.9E-116 T 22-04-2016 YPO3036 535f66bae270960edddd1b460edc254f 200 PIRSF PIRSF000013 1 200 1.7E-109 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 YPO0347 dff71fdd4cc4c9250306222190d8bad3 433 PIRSF PIRSF004539 1 433 7.3E-175 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YPO0347 dff71fdd4cc4c9250306222190d8bad3 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 3.8E-195 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YPO0347 dff71fdd4cc4c9250306222190d8bad3 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 4.3E-142 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YPO0347 dff71fdd4cc4c9250306222190d8bad3 433 PANTHER PTHR36106:SF2 1 433 0.0 T 22-04-2016 YPO0347 dff71fdd4cc4c9250306222190d8bad3 433 PANTHER PTHR36106 1 433 0.0 T 22-04-2016 YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 Gene3D G3DSA:3.40.50.300 584 783 3.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SMART SM01058 476 573 6.0E-51 T 22-04-2016 IPR003711 CarD-like/TRCF domain YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 Gene3D G3DSA:3.40.50.300 794 960 6.6E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SUPERFAMILY SSF52540 520 780 2.45E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 7.9E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SUPERFAMILY SSF52540 351 463 2.71E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SUPERFAMILY SSF143517 992 1144 1.83E-43 T 22-04-2016 YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SMART SM00982 1005 1105 1.2E-47 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 4.6E-18 T 22-04-2016 IPR001650 Helicase, C-terminal YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 PANTHER PTHR14025 383 1139 0.0 T 22-04-2016 YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SMART SM00487 597 787 6.0E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1125 28.575 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SUPERFAMILY SSF52540 8 341 4.69E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 Pfam PF03461 TRCF domain 1007 1097 2.2E-27 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 PANTHER PTHR14025:SF21 383 1139 0.0 T 22-04-2016 YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SUPERFAMILY SSF141259 468 545 5.36E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 7.9E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SUPERFAMILY SSF52540 779 987 1.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 SMART SM00490 823 907 2.8E-19 T 22-04-2016 IPR001650 Helicase, C-terminal YPO1625 4a11c18aa40bf7f54772e0ae10532b42 1148 Gene3D G3DSA:3.30.2060.10 130 207 1.8E-13 T 22-04-2016 YPO1203 7ede0889e31d12ba90784981f9259439 296 PANTHER PTHR32322 1 296 3.3E-160 T 22-04-2016 YPO1203 7ede0889e31d12ba90784981f9259439 296 SUPERFAMILY SSF103481 187 290 9.68E-13 T 22-04-2016 YPO1203 7ede0889e31d12ba90784981f9259439 296 Pfam PF00892 EamA-like transporter family 16 144 2.9E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO1203 7ede0889e31d12ba90784981f9259439 296 Pfam PF00892 EamA-like transporter family 154 287 1.0E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO1203 7ede0889e31d12ba90784981f9259439 296 PANTHER PTHR32322:SF8 1 296 3.3E-160 T 22-04-2016 YPO1203 7ede0889e31d12ba90784981f9259439 296 SUPERFAMILY SSF103481 45 146 6.02E-12 T 22-04-2016 YPO3312 6d5f87381be59b13c4268c3b1c5f55e8 495 SUPERFAMILY SSF53067 6 254 3.33E-74 T 22-04-2016 YPO3312 6d5f87381be59b13c4268c3b1c5f55e8 495 PANTHER PTHR10196 1 491 3.0E-189 T 22-04-2016 YPO3312 6d5f87381be59b13c4268c3b1c5f55e8 495 Gene3D G3DSA:3.30.420.40 2 253 3.6E-80 T 22-04-2016 YPO3312 6d5f87381be59b13c4268c3b1c5f55e8 495 PANTHER PTHR10196:SF9 1 491 3.0E-189 T 22-04-2016 YPO3312 6d5f87381be59b13c4268c3b1c5f55e8 495 PIRSF PIRSF000538 3 493 1.8E-128 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO3312 6d5f87381be59b13c4268c3b1c5f55e8 495 Gene3D G3DSA:3.30.420.40 257 490 6.6E-74 T 22-04-2016 YPO3312 6d5f87381be59b13c4268c3b1c5f55e8 495 SUPERFAMILY SSF53067 257 490 1.41E-61 T 22-04-2016 YPO3312 6d5f87381be59b13c4268c3b1c5f55e8 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 446 3.7E-48 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPO3312 6d5f87381be59b13c4268c3b1c5f55e8 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 1.2E-60 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPO1447 d9e910472902b00c4b3e2deae87451de 108 Gene3D G3DSA:3.30.1420.10 1 38 2.7E-14 T 22-04-2016 YPO1447 d9e910472902b00c4b3e2deae87451de 108 Gene3D G3DSA:1.10.10.370 39 108 6.1E-39 T 22-04-2016 YPO1447 d9e910472902b00c4b3e2deae87451de 108 Pfam PF04358 DsrC like protein 2 108 8.4E-47 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE YPO1447 d9e910472902b00c4b3e2deae87451de 108 PANTHER PTHR37010 1 108 8.7E-65 T 22-04-2016 YPO1447 d9e910472902b00c4b3e2deae87451de 108 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 1 108 4.3E-51 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE YPO1447 d9e910472902b00c4b3e2deae87451de 108 PIRSF PIRSF006223 1 108 1.2E-47 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE YPO1447 d9e910472902b00c4b3e2deae87451de 108 PANTHER PTHR37010:SF1 1 108 8.7E-65 T 22-04-2016 YPO1447 d9e910472902b00c4b3e2deae87451de 108 SUPERFAMILY SSF69721 2 108 5.49E-42 T 22-04-2016 IPR025526 DsrC-like domain YPO3004 c1294c5ca9de7ed54d4a401a4b2bcf12 323 Gene3D G3DSA:3.90.230.10 95 320 5.2E-48 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO3004 c1294c5ca9de7ed54d4a401a4b2bcf12 323 Pfam PF00557 Metallopeptidase family M24 103 305 6.6E-35 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO3004 c1294c5ca9de7ed54d4a401a4b2bcf12 323 SUPERFAMILY SSF55920 92 320 3.27E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO3004 c1294c5ca9de7ed54d4a401a4b2bcf12 323 PANTHER PTHR10804 3 37 7.7E-45 T 22-04-2016 YPO3004 c1294c5ca9de7ed54d4a401a4b2bcf12 323 PANTHER PTHR10804 76 320 7.7E-45 T 22-04-2016 YPO3004 c1294c5ca9de7ed54d4a401a4b2bcf12 323 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 95 1.9E-6 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 YPO3004 c1294c5ca9de7ed54d4a401a4b2bcf12 323 SUPERFAMILY SSF53092 40 93 5.93E-6 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 Pfam PF00664 ABC transporter transmembrane region 34 291 4.0E-7 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 Pfam PF00005 ABC transporter 361 510 1.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 Gene3D G3DSA:3.40.50.300 344 575 1.5E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 SUPERFAMILY SSF90123 17 331 5.36E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 Gene3D G3DSA:1.20.1560.10 17 331 6.3E-34 T 22-04-2016 YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 SMART SM00382 370 562 6.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 SUPERFAMILY SSF52540 339 581 1.51E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 PANTHER PTHR24222:SF25 1 597 0.0 T 22-04-2016 YPO1914 f2e5a45957cb26eed9f37736c4780f5d 600 PANTHER PTHR24222 1 597 0.0 T 22-04-2016 YPO3465 edbfae171ce78f907c9f102186fc3f22 250 SMART SM00849 37 223 9.4E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO3465 edbfae171ce78f907c9f102186fc3f22 250 Gene3D G3DSA:3.60.15.10 1 249 2.8E-53 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO3465 edbfae171ce78f907c9f102186fc3f22 250 Pfam PF12706 Beta-lactamase superfamily domain 50 220 6.0E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO3465 edbfae171ce78f907c9f102186fc3f22 250 SUPERFAMILY SSF56281 1 249 3.66E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO3465 edbfae171ce78f907c9f102186fc3f22 250 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 247 2.7E-130 T 22-04-2016 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 YPO3465 edbfae171ce78f907c9f102186fc3f22 250 PANTHER PTHR12553 1 249 1.9E-54 T 22-04-2016 YPO3598 8eea7a8b32721e4f83c5efa965ef8488 255 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 34 243 1.4E-61 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO3598 8eea7a8b32721e4f83c5efa965ef8488 255 PANTHER PTHR38033:SF1 3 255 1.5E-106 T 22-04-2016 YPO3598 8eea7a8b32721e4f83c5efa965ef8488 255 PANTHER PTHR38033 3 255 1.5E-106 T 22-04-2016 YPO3598 8eea7a8b32721e4f83c5efa965ef8488 255 Pfam PF09850 Type VI secretion system protein DotU 36 238 1.4E-57 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YPO0919 7705f87e858e6fd6719440b4949e429f 289 SUPERFAMILY SSF82861 28 112 2.22E-16 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YPO0919 7705f87e858e6fd6719440b4949e429f 289 SUPERFAMILY SSF82689 181 279 9.55E-29 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YPO0919 7705f87e858e6fd6719440b4949e429f 289 Pfam PF00924 Mechanosensitive ion channel 72 268 2.0E-53 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YPO0919 7705f87e858e6fd6719440b4949e429f 289 Gene3D G3DSA:2.30.30.60 129 178 5.8E-19 T 22-04-2016 YPO0919 7705f87e858e6fd6719440b4949e429f 289 Pfam PF05552 Conserved TM helix 15 64 5.2E-14 T 22-04-2016 IPR008910 Conserved TM helix YPO0919 7705f87e858e6fd6719440b4949e429f 289 PANTHER PTHR30221:SF7 1 289 1.1E-117 T 22-04-2016 YPO0919 7705f87e858e6fd6719440b4949e429f 289 SUPERFAMILY SSF50182 114 179 7.52E-17 T 22-04-2016 IPR010920 LSM domain YPO0919 7705f87e858e6fd6719440b4949e429f 289 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YPO0919 7705f87e858e6fd6719440b4949e429f 289 PANTHER PTHR30221 1 289 1.1E-117 T 22-04-2016 YPO0919 7705f87e858e6fd6719440b4949e429f 289 Gene3D G3DSA:3.30.70.100 182 266 4.2E-25 T 22-04-2016 YPO2778 7ae49199b636f4e564f0e1649cf5d9e6 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 1.2E-114 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 YPO2778 7ae49199b636f4e564f0e1649cf5d9e6 302 Gene3D G3DSA:3.40.50.720 1 251 4.6E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2778 7ae49199b636f4e564f0e1649cf5d9e6 302 SUPERFAMILY SSF51735 1 298 8.1E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2778 7ae49199b636f4e564f0e1649cf5d9e6 302 PANTHER PTHR11092 1 302 4.7E-158 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 YPO2778 7ae49199b636f4e564f0e1649cf5d9e6 302 PANTHER PTHR11092:SF0 1 302 4.7E-158 T 22-04-2016 YPO2778 7ae49199b636f4e564f0e1649cf5d9e6 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 9.1E-19 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO2778 7ae49199b636f4e564f0e1649cf5d9e6 302 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 1.4E-19 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 YPO2138 4f1f625ed89fe4973d00fc076080a6b4 399 PANTHER PTHR11601 1 388 1.9E-202 T 22-04-2016 YPO2138 4f1f625ed89fe4973d00fc076080a6b4 399 SUPERFAMILY SSF53383 3 381 2.29E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO2138 4f1f625ed89fe4973d00fc076080a6b4 399 PANTHER PTHR11601:SF45 1 388 1.9E-202 T 22-04-2016 YPO2138 4f1f625ed89fe4973d00fc076080a6b4 399 PIRSF PIRSF005572 5 386 2.4E-125 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPO2138 4f1f625ed89fe4973d00fc076080a6b4 399 Gene3D G3DSA:3.90.1150.10 255 376 1.6E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO2138 4f1f625ed89fe4973d00fc076080a6b4 399 Gene3D G3DSA:3.40.640.10 20 254 5.4E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO2138 4f1f625ed89fe4973d00fc076080a6b4 399 Pfam PF00266 Aminotransferase class-V 8 371 1.6E-83 T 22-04-2016 IPR000192 Aminotransferase class V domain YPO3138 e170c44f73704e57c10cc6de67d4d054 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 4.0E-33 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YPO3138 e170c44f73704e57c10cc6de67d4d054 67 SUPERFAMILY SSF68989 1 67 1.22E-30 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YPO3138 e170c44f73704e57c10cc6de67d4d054 67 Gene3D G3DSA:1.20.1280.40 1 67 4.8E-37 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YPO2423 f8b08369999c41f8bb1fc216c67dbd80 253 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2423 f8b08369999c41f8bb1fc216c67dbd80 253 Gene3D G3DSA:3.40.50.300 17 234 3.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2423 f8b08369999c41f8bb1fc216c67dbd80 253 SUPERFAMILY SSF52540 15 229 3.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2423 f8b08369999c41f8bb1fc216c67dbd80 253 PANTHER PTHR24220 1 239 2.0E-137 T 22-04-2016 YPO2423 f8b08369999c41f8bb1fc216c67dbd80 253 PANTHER PTHR24220:SF547 1 239 2.0E-137 T 22-04-2016 YPO2423 f8b08369999c41f8bb1fc216c67dbd80 253 SMART SM00382 24 220 4.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2423 f8b08369999c41f8bb1fc216c67dbd80 253 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 4 251 47.501 T 22-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 YPO2423 f8b08369999c41f8bb1fc216c67dbd80 253 Pfam PF00005 ABC transporter 18 164 9.5E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3461 fe75ebc912d84ce26982e034978bba48 263 Pfam PF00005 ABC transporter 28 184 4.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3461 fe75ebc912d84ce26982e034978bba48 263 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 9 261 1.6E-119 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK YPO3461 fe75ebc912d84ce26982e034978bba48 263 PIRSF PIRSF037116 1 263 7.2E-142 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK YPO3461 fe75ebc912d84ce26982e034978bba48 263 Gene3D G3DSA:3.40.50.300 10 258 1.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3461 fe75ebc912d84ce26982e034978bba48 263 SUPERFAMILY SSF52540 7 259 1.13E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3461 fe75ebc912d84ce26982e034978bba48 263 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3461 fe75ebc912d84ce26982e034978bba48 263 PANTHER PTHR24220 13 263 8.3E-146 T 22-04-2016 YPO3461 fe75ebc912d84ce26982e034978bba48 263 SMART SM00382 36 234 3.3E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3461 fe75ebc912d84ce26982e034978bba48 263 PANTHER PTHR24220:SF554 13 263 8.3E-146 T 22-04-2016 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 Pfam PF13416 Bacterial extracellular solute-binding protein 55 357 4.1E-53 T 22-04-2016 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 PANTHER PTHR30061 1 416 1.1E-149 T 22-04-2016 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 Gene3D G3DSA:3.40.190.10 40 161 9.8E-21 T 22-04-2016 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 Gene3D G3DSA:3.40.190.10 162 341 2.1E-48 T 22-04-2016 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 SUPERFAMILY SSF53850 40 409 1.13E-79 T 22-04-2016 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 PANTHER PTHR30061:SF21 1 416 1.1E-149 T 22-04-2016 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 PRINTS PR00181 Maltose binding protein signature 371 390 2.1E-8 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 PRINTS PR00181 Maltose binding protein signature 78 96 2.1E-8 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 PRINTS PR00181 Maltose binding protein signature 138 157 2.1E-8 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO0856 dbe58b50454a40db1a1bf5a2f5b7864a 420 PRINTS PR00181 Maltose binding protein signature 159 178 2.1E-8 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO2147 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF51905 107 271 3.24E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2147 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF51905 1 54 3.24E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2147 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF51905 359 417 3.24E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2147 336726945e6408b4e427bca9f98f73d7 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 52.832 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 YPO2147 336726945e6408b4e427bca9f98f73d7 434 PANTHER PTHR13847 1 63 4.2E-268 T 22-04-2016 YPO2147 336726945e6408b4e427bca9f98f73d7 434 PANTHER PTHR13847 107 434 4.2E-268 T 22-04-2016 YPO2147 336726945e6408b4e427bca9f98f73d7 434 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.5E-71 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YPO2147 336726945e6408b4e427bca9f98f73d7 434 PANTHER PTHR13847:SF148 1 63 4.2E-268 T 22-04-2016 YPO2147 336726945e6408b4e427bca9f98f73d7 434 PANTHER PTHR13847:SF148 107 434 4.2E-268 T 22-04-2016 YPO2147 336726945e6408b4e427bca9f98f73d7 434 SUPERFAMILY SSF54373 269 359 1.96E-17 T 22-04-2016 YPO2147 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 108 122 5.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2147 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 190 269 5.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2147 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 359 417 5.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2147 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.50.50.60 1 55 5.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2147 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.30.9.10 270 358 5.9E-16 T 22-04-2016 YPO2147 336726945e6408b4e427bca9f98f73d7 434 Gene3D G3DSA:3.30.9.10 135 189 5.9E-16 T 22-04-2016 YPO3273 e63315080cf3f3e014d65497b4bfb047 452 Pfam PF13091 PLD-like domain 258 402 2.9E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain YPO3273 e63315080cf3f3e014d65497b4bfb047 452 SUPERFAMILY SSF56024 11 212 3.45E-27 T 22-04-2016 YPO3273 e63315080cf3f3e014d65497b4bfb047 452 Gene3D G3DSA:3.30.870.10 255 395 2.4E-14 T 22-04-2016 YPO3273 e63315080cf3f3e014d65497b4bfb047 452 PIRSF PIRSF000850 1 452 1.5E-261 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPO3273 e63315080cf3f3e014d65497b4bfb047 452 SUPERFAMILY SSF56024 254 394 8.79E-18 T 22-04-2016 YPO3273 e63315080cf3f3e014d65497b4bfb047 452 PANTHER PTHR12586:SF3 1 451 7.1E-284 T 22-04-2016 YPO3273 e63315080cf3f3e014d65497b4bfb047 452 SMART SM00155 353 380 0.0025 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YPO3273 e63315080cf3f3e014d65497b4bfb047 452 SMART SM00155 134 160 0.0049 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YPO3273 e63315080cf3f3e014d65497b4bfb047 452 PANTHER PTHR12586 1 451 7.1E-284 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPO3273 e63315080cf3f3e014d65497b4bfb047 452 Gene3D G3DSA:3.30.870.10 37 215 3.4E-15 T 22-04-2016 YPO0384 f4c2c050243932dd6271645fd1f134dd 103 Gene3D G3DSA:3.30.1660.10 38 103 4.4E-19 T 22-04-2016 IPR025543 Dodecin-like YPO0384 f4c2c050243932dd6271645fd1f134dd 103 Pfam PF07338 Protein of unknown function (DUF1471) 48 103 1.2E-16 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO0384 f4c2c050243932dd6271645fd1f134dd 103 SUPERFAMILY SSF159871 5 103 1.11E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 SUPERFAMILY SSF51621 6 878 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 878 1.2E-289 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 PANTHER PTHR30523:SF3 1 878 0.0 T 22-04-2016 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 PANTHER PTHR30523 1 878 0.0 T 22-04-2016 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 9.0E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 878 18.23 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 Gene3D G3DSA:1.20.1440.90 272 387 4.0E-34 T 22-04-2016 YPO3929 eec0ecfe5ca26261a9ee1f946e1a2534 878 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YPO1276 f52e6f86b7e636bd4e4f096a3abb372a 233 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 42.018 T 22-04-2016 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 UniPathway: UPA00030 YPO1276 f52e6f86b7e636bd4e4f096a3abb372a 233 SMART SM00014 95 210 2.2E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1276 f52e6f86b7e636bd4e4f096a3abb372a 233 SUPERFAMILY SSF48317 24 222 5.49E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1276 f52e6f86b7e636bd4e4f096a3abb372a 233 Pfam PF01569 PAP2 superfamily 98 201 4.1E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1276 f52e6f86b7e636bd4e4f096a3abb372a 233 Gene3D G3DSA:1.20.144.10 24 201 3.5E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO0063 77a5bb4ea6122905c7e65e743de0479b 450 PANTHER PTHR21666:SF213 5 450 6.7E-227 T 22-04-2016 YPO0063 77a5bb4ea6122905c7e65e743de0479b 450 Pfam PF01551 Peptidase family M23 351 444 7.9E-26 T 22-04-2016 IPR016047 Peptidase M23 YPO0063 77a5bb4ea6122905c7e65e743de0479b 450 SUPERFAMILY SSF51261 281 448 3.79E-46 T 22-04-2016 IPR011055 Duplicated hybrid motif YPO0063 77a5bb4ea6122905c7e65e743de0479b 450 Gene3D G3DSA:2.70.70.10 313 449 2.0E-37 T 22-04-2016 YPO0063 77a5bb4ea6122905c7e65e743de0479b 450 PANTHER PTHR21666 5 450 6.7E-227 T 22-04-2016 YPO2714 5c419e7d4e08e8222bd29d77452500e6 151 PANTHER PTHR35867 2 151 3.4E-44 T 22-04-2016 YPO2714 5c419e7d4e08e8222bd29d77452500e6 151 PANTHER PTHR35867:SF1 2 151 3.4E-44 T 22-04-2016 YPO2714 5c419e7d4e08e8222bd29d77452500e6 151 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 140 3.5E-35 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC YPO2714 5c419e7d4e08e8222bd29d77452500e6 151 PIRSF PIRSF004923 1 150 7.2E-38 T 22-04-2016 IPR026268 Protein RseC YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 Gene3D G3DSA:3.40.50.300 160 343 3.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 1.4E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 2.8E-146 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 PANTHER PTHR11702:SF3 1 378 6.7E-202 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 SUPERFAMILY SSF52540 151 339 3.54E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 Pfam PF01018 GTP1/OBG 3 156 7.9E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 Gene3D G3DSA:2.70.210.12 2 156 1.7E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 PANTHER PTHR11702 1 378 6.7E-202 T 22-04-2016 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 SUPERFAMILY SSF82051 2 157 1.31E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.084 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 YPO3509 8eb153cfb823fe749ec91f290ba039a2 390 PIRSF PIRSF002401 1 375 1.1E-139 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YPO1346 9ae1b5d7ed645fadf1163b7a93cd2bd6 262 Gene3D G3DSA:3.40.50.720 111 195 2.8E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1346 9ae1b5d7ed645fadf1163b7a93cd2bd6 262 SUPERFAMILY SSF51735 110 216 6.69E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1346 9ae1b5d7ed645fadf1163b7a93cd2bd6 262 PANTHER PTHR32266 1 256 8.0E-58 T 22-04-2016 YPO1346 9ae1b5d7ed645fadf1163b7a93cd2bd6 262 Pfam PF03059 Nicotianamine synthase protein 6 226 4.5E-13 T 22-04-2016 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 YPO0412 5b742140586f5df685819d6d95aea507 527 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0412 5b742140586f5df685819d6d95aea507 527 Gene3D G3DSA:3.40.50.300 266 485 5.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0412 5b742140586f5df685819d6d95aea507 527 SMART SM00382 36 220 1.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0412 5b742140586f5df685819d6d95aea507 527 SMART SM00382 291 483 2.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0412 5b742140586f5df685819d6d95aea507 527 SUPERFAMILY SSF52540 10 228 1.03E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0412 5b742140586f5df685819d6d95aea507 527 Gene3D G3DSA:3.40.50.300 10 232 5.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0412 5b742140586f5df685819d6d95aea507 527 PANTHER PTHR24220 13 391 2.0E-288 T 22-04-2016 YPO0412 5b742140586f5df685819d6d95aea507 527 PANTHER PTHR24220:SF555 13 391 2.0E-288 T 22-04-2016 IPR030281 Autoinducer 2 import ATP-binding protein LsrA GO:0005524|GO:0006810|GO:0016021|GO:0042626 KEGG: 00920+3.6.3.- YPO0412 5b742140586f5df685819d6d95aea507 527 SUPERFAMILY SSF52540 282 484 2.28E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0412 5b742140586f5df685819d6d95aea507 527 Pfam PF00005 ABC transporter 27 169 2.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0412 5b742140586f5df685819d6d95aea507 527 Pfam PF00005 ABC transporter 284 434 7.5E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1138 681f8727fdec15b8108370597c5aaf32 350 Gene3D G3DSA:3.30.428.10 176 345 3.2E-75 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPO1138 681f8727fdec15b8108370597c5aaf32 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 22-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1138 681f8727fdec15b8108370597c5aaf32 350 PANTHER PTHR11943:SF2 3 350 3.2E-218 T 22-04-2016 YPO1138 681f8727fdec15b8108370597c5aaf32 350 SUPERFAMILY SSF54197 179 345 1.7E-54 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPO1138 681f8727fdec15b8108370597c5aaf32 350 SUPERFAMILY SSF54197 4 177 3.69E-72 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPO1138 681f8727fdec15b8108370597c5aaf32 350 PIRSF PIRSF000808 1 341 6.2E-122 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1138 681f8727fdec15b8108370597c5aaf32 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 346 5.3E-199 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1138 681f8727fdec15b8108370597c5aaf32 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 346 2.7E-68 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1138 681f8727fdec15b8108370597c5aaf32 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 4 176 6.2E-71 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1138 681f8727fdec15b8108370597c5aaf32 350 Gene3D G3DSA:3.30.428.10 45 175 6.4E-58 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPO1138 681f8727fdec15b8108370597c5aaf32 350 PANTHER PTHR11943 3 350 3.2E-218 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 280 1.4E-90 T 22-04-2016 IPR024674 HpaB/PvcC/4-BUDH N-terminal YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 489 2.3E-61 T 22-04-2016 IPR024719 HpaB/PvcC/4-BUDH C-terminal YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 22-04-2016 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431|UniPathway: UPA00208 YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 PIRSF PIRSF000331 11 501 1.7E-191 T 22-04-2016 IPR004925 HpaB/PvcC/4-BUDH YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 SUPERFAMILY SSF56645 13 282 2.33E-80 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 PANTHER PTHR36117:SF1 1 516 0.0 T 22-04-2016 YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 Gene3D G3DSA:1.20.140.10 274 479 2.3E-33 T 22-04-2016 YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 SUPERFAMILY SSF47203 272 493 5.44E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 Gene3D G3DSA:2.40.110.10 152 273 3.0E-47 T 22-04-2016 YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 PANTHER PTHR36117 1 516 0.0 T 22-04-2016 YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 Gene3D G3DSA:1.10.3140.10 12 150 1.2E-53 T 22-04-2016 YPO1769 162d51f5d162aad413d9ac6c2975ccb5 520 PIRSF PIRSF500125 1 518 2.6E-275 T 22-04-2016 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 Gene3D G3DSA:3.30.70.1430 39 140 6.8E-32 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82714 183 273 2.22E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PANTHER PTHR32063:SF13 1 1037 0.0 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1036 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 Gene3D G3DSA:1.20.1640.10 293 507 1.6E-62 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82866 297 498 3.92E-51 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82693 39 132 7.85E-25 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 Gene3D G3DSA:1.10.3850.10 814 1026 5.7E-50 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 Gene3D G3DSA:3.30.70.1430 567 671 5.2E-35 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82714 722 808 3.14E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PANTHER PTHR32063 1 1037 0.0 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 Gene3D G3DSA:3.30.2090.10 182 276 4.1E-29 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.2E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82693 565 671 1.52E-29 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82866 833 1025 7.06E-38 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82693 808 855 5.41E-23 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82693 672 721 5.41E-23 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 Gene3D G3DSA:3.30.2090.10 722 808 8.2E-25 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82693 136 183 3.14E-25 T 22-04-2016 YPO3482 b52984bb1c3de9ff4c6f243b9d6cc44c 1041 SUPERFAMILY SSF82693 275 331 3.14E-25 T 22-04-2016 YPO1856 59bd9ac0ca611ffb57588a143f6b67fb 434 Pfam PF04261 Dyp-type peroxidase family 73 421 1.1E-110 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YPO1856 59bd9ac0ca611ffb57588a143f6b67fb 434 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 18 433 3.2E-168 T 22-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- YPO1856 59bd9ac0ca611ffb57588a143f6b67fb 434 PANTHER PTHR30521:SF4 56 434 2.2E-206 T 22-04-2016 YPO1856 59bd9ac0ca611ffb57588a143f6b67fb 434 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 73 421 5.7E-100 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YPO1856 59bd9ac0ca611ffb57588a143f6b67fb 434 SUPERFAMILY SSF54909 66 427 5.01E-98 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO1856 59bd9ac0ca611ffb57588a143f6b67fb 434 PANTHER PTHR30521 56 434 2.2E-206 T 22-04-2016 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 SMART SM00388 280 350 5.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 501 9.6E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3008 c78cb26d8f29d496881aaede08265e0d 514 SUPERFAMILY SSF55874 340 501 1.83E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3008 c78cb26d8f29d496881aaede08265e0d 514 Gene3D G3DSA:3.30.565.10 336 501 9.2E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3008 c78cb26d8f29d496881aaede08265e0d 514 SMART SM00387 391 502 6.4E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3008 c78cb26d8f29d496881aaede08265e0d 514 PANTHER PTHR24423 267 509 6.8E-65 T 22-04-2016 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 PANTHER PTHR24423 7 14 6.8E-65 T 22-04-2016 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 Gene3D G3DSA:1.10.287.130 273 335 5.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 SUPERFAMILY SSF47384 265 347 3.73E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO3008 c78cb26d8f29d496881aaede08265e0d 514 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 499 1.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0054 313f5f33950eb94c233d28f942ee6ed8 260 Gene3D G3DSA:3.90.550.10 3 111 2.7E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO0054 313f5f33950eb94c233d28f942ee6ed8 260 Pfam PF00535 Glycosyl transferase family 2 8 132 5.5E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPO0054 313f5f33950eb94c233d28f942ee6ed8 260 PANTHER PTHR10859 4 132 8.5E-33 T 22-04-2016 YPO0054 313f5f33950eb94c233d28f942ee6ed8 260 SUPERFAMILY SSF53448 3 150 1.59E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO2561 05cd71900c6112a6f484005b4009ef26 611 PANTHER PTHR10283:SF12 275 354 3.9E-258 T 22-04-2016 YPO2561 05cd71900c6112a6f484005b4009ef26 611 PANTHER PTHR10283:SF12 1 226 3.9E-258 T 22-04-2016 YPO2561 05cd71900c6112a6f484005b4009ef26 611 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 559 575 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site YPO2561 05cd71900c6112a6f484005b4009ef26 611 PANTHER PTHR10283 1 226 3.9E-258 T 22-04-2016 YPO2561 05cd71900c6112a6f484005b4009ef26 611 PANTHER PTHR10283 449 611 3.9E-258 T 22-04-2016 YPO2561 05cd71900c6112a6f484005b4009ef26 611 Gene3D G3DSA:3.30.70.1450 233 311 7.9E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO2561 05cd71900c6112a6f484005b4009ef26 611 Gene3D G3DSA:3.30.70.1450 323 394 4.0E-22 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO2561 05cd71900c6112a6f484005b4009ef26 611 PANTHER PTHR10283:SF12 449 611 3.9E-258 T 22-04-2016 YPO2561 05cd71900c6112a6f484005b4009ef26 611 Pfam PF03600 Citrate transporter 431 609 1.2E-19 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 YPO2561 05cd71900c6112a6f484005b4009ef26 611 Pfam PF03600 Citrate transporter 17 197 2.3E-35 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 YPO2561 05cd71900c6112a6f484005b4009ef26 611 SUPERFAMILY SSF116726 233 290 9.94E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO2561 05cd71900c6112a6f484005b4009ef26 611 Pfam PF02080 TrkA-C domain 232 298 1.6E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO2561 05cd71900c6112a6f484005b4009ef26 611 Pfam PF02080 TrkA-C domain 327 393 2.3E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO2561 05cd71900c6112a6f484005b4009ef26 611 SUPERFAMILY SSF116726 321 393 8.11E-18 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO2561 05cd71900c6112a6f484005b4009ef26 611 PANTHER PTHR10283 275 354 3.9E-258 T 22-04-2016 YPO3617 1b36f089fd512cd2b0db4879954e2bf6 299 Gene3D G3DSA:3.20.20.150 3 294 3.9E-42 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3617 1b36f089fd512cd2b0db4879954e2bf6 299 SUPERFAMILY SSF51658 8 289 8.15E-37 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3617 1b36f089fd512cd2b0db4879954e2bf6 299 Pfam PF01261 Xylose isomerase-like TIM barrel 20 228 2.2E-27 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3617 1b36f089fd512cd2b0db4879954e2bf6 299 PANTHER PTHR12110 1 294 1.2E-23 T 22-04-2016 YPO2747 7f8b34db15d203122d097506d9b33625 774 PANTHER PTHR23309 41 768 0.0 T 22-04-2016 YPO2747 7f8b34db15d203122d097506d9b33625 774 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 40 760 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO2747 7f8b34db15d203122d097506d9b33625 774 SUPERFAMILY SSF48179 669 760 2.64E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO2747 7f8b34db15d203122d097506d9b33625 774 SUPERFAMILY SSF51735 342 523 1.92E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2747 7f8b34db15d203122d097506d9b33625 774 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 345 523 1.5E-56 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO2747 7f8b34db15d203122d097506d9b33625 774 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 526 619 5.0E-25 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO2747 7f8b34db15d203122d097506d9b33625 774 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 670 756 4.6E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO2747 7f8b34db15d203122d097506d9b33625 774 SUPERFAMILY SSF48179 526 625 1.79E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO2747 7f8b34db15d203122d097506d9b33625 774 Gene3D G3DSA:1.10.1040.10 679 759 3.0E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO2747 7f8b34db15d203122d097506d9b33625 774 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 523 548 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO2747 7f8b34db15d203122d097506d9b33625 774 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 35 760 54.558 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO2747 7f8b34db15d203122d097506d9b33625 774 Gene3D G3DSA:3.40.50.720 339 527 2.3E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2747 7f8b34db15d203122d097506d9b33625 774 SUPERFAMILY SSF52096 38 333 3.77E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2747 7f8b34db15d203122d097506d9b33625 774 Gene3D G3DSA:3.90.226.10 37 237 1.4E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2747 7f8b34db15d203122d097506d9b33625 774 Pfam PF00378 Enoyl-CoA hydratase/isomerase 52 237 1.7E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPO2747 7f8b34db15d203122d097506d9b33625 774 Gene3D G3DSA:1.10.1040.10 528 619 1.3E-27 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO2747 7f8b34db15d203122d097506d9b33625 774 PANTHER PTHR23309:SF6 41 768 0.0 T 22-04-2016 YPO2562 8d3a63fe2cd0f66febb696311252f743 218 PANTHER PTHR18901 1 206 4.5E-152 T 22-04-2016 YPO2562 8d3a63fe2cd0f66febb696311252f743 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 2.4E-22 T 22-04-2016 IPR023214 HAD-like domain YPO2562 8d3a63fe2cd0f66febb696311252f743 218 PANTHER PTHR18901:SF20 1 206 4.5E-152 T 22-04-2016 YPO2562 8d3a63fe2cd0f66febb696311252f743 218 Gene3D G3DSA:3.40.50.1000 63 206 1.2E-44 T 22-04-2016 IPR023214 HAD-like domain YPO2562 8d3a63fe2cd0f66febb696311252f743 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 181 4.6E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2562 8d3a63fe2cd0f66febb696311252f743 218 Gene3D G3DSA:1.10.150.240 19 62 3.1E-5 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO2562 8d3a63fe2cd0f66febb696311252f743 218 SUPERFAMILY SSF56784 4 203 6.34E-46 T 22-04-2016 IPR023214 HAD-like domain YPO2562 8d3a63fe2cd0f66febb696311252f743 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2562 8d3a63fe2cd0f66febb696311252f743 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 1.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2562 8d3a63fe2cd0f66febb696311252f743 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 1.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO3546 1b5744deda53c14d411fdee26b8529cb 234 SUPERFAMILY SSF51182 1 232 1.07E-45 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO3546 1b5744deda53c14d411fdee26b8529cb 234 Gene3D G3DSA:2.60.120.10 4 232 2.6E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO3546 1b5744deda53c14d411fdee26b8529cb 234 Pfam PF02678 Pirin 5 119 1.0E-21 T 22-04-2016 IPR003829 Pirin, N-terminal domain YPO3546 1b5744deda53c14d411fdee26b8529cb 234 PANTHER PTHR13903 1 234 6.5E-176 T 22-04-2016 IPR012093 Pirin YPO3546 1b5744deda53c14d411fdee26b8529cb 234 PIRSF PIRSF006232 1 231 6.3E-32 T 22-04-2016 IPR012093 Pirin YPO3546 1b5744deda53c14d411fdee26b8529cb 234 PANTHER PTHR13903:SF14 1 234 6.5E-176 T 22-04-2016 YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 SUPERFAMILY SSF69255 382 472 3.14E-25 T 22-04-2016 YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 PANTHER PTHR32305:SF7 31 782 0.0 T 22-04-2016 YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 PANTHER PTHR32305 31 782 0.0 T 22-04-2016 YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 SUPERFAMILY SSF69279 22 203 2.32E-47 T 22-04-2016 YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 22 515 4.4E-74 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 Gene3D G3DSA:3.55.50.10 112 205 6.1E-30 T 22-04-2016 YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 Gene3D G3DSA:4.10.180.10 297 312 3.1E-7 T 22-04-2016 IPR027440 Capsid protein alpha-like domain YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 Gene3D G3DSA:2.40.50.230 390 471 2.8E-25 T 22-04-2016 IPR006531 Gp5 N-terminal YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 SUPERFAMILY SSF69279 204 383 2.38E-50 T 22-04-2016 YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 751 1.8E-51 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 591 2.7E-35 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 2.3E-186 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO0970 6b45b0b8e6668f8a73c93dd7eac5b1e2 782 Pfam PF05954 Phage late control gene D protein (GPD) 34 355 1.6E-63 T 22-04-2016 YPO3764a 418525d7ea5bf269982e082b326c420d 158 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 35 64 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YPO3764a 418525d7ea5bf269982e082b326c420d 158 SUPERFAMILY SSF54211 12 84 1.52E-24 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3764a 418525d7ea5bf269982e082b326c420d 158 Gene3D G3DSA:3.30.230.30 14 85 9.5E-27 T 22-04-2016 IPR001498 Impact, N-terminal YPO3764a 418525d7ea5bf269982e082b326c420d 158 Pfam PF09186 Domain of unknown function (DUF1949) 96 150 6.1E-14 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YPO3764a 418525d7ea5bf269982e082b326c420d 158 Gene3D G3DSA:3.30.70.240 90 158 3.0E-25 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YPO3764a 418525d7ea5bf269982e082b326c420d 158 PANTHER PTHR16301 11 155 1.2E-35 T 22-04-2016 IPR023582 Impact family YPO3764a 418525d7ea5bf269982e082b326c420d 158 SUPERFAMILY SSF54980 91 156 7.91E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO3764a 418525d7ea5bf269982e082b326c420d 158 Pfam PF01205 Uncharacterized protein family UPF0029 21 80 4.5E-15 T 22-04-2016 IPR001498 Impact, N-terminal YPO3764a 418525d7ea5bf269982e082b326c420d 158 PANTHER PTHR16301:SF0 11 155 1.2E-35 T 22-04-2016 YPO3485 628759738f8ff7de2f1077aa34b9f281 103 Pfam PF01381 Helix-turn-helix 42 91 2.9E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO3485 628759738f8ff7de2f1077aa34b9f281 103 Gene3D G3DSA:1.10.260.40 33 93 2.4E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3485 628759738f8ff7de2f1077aa34b9f281 103 SMART SM00530 39 94 7.7E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO3485 628759738f8ff7de2f1077aa34b9f281 103 SUPERFAMILY SSF47413 30 92 7.78E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO1827 f597d00f737936c1e3c175836770991e 484 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 191 402 7.4E-71 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO1827 f597d00f737936c1e3c175836770991e 484 PANTHER PTHR15184:SF9 17 108 4.1E-238 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO1827 f597d00f737936c1e3c175836770991e 484 PANTHER PTHR15184:SF9 133 482 4.1E-238 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO1827 f597d00f737936c1e3c175836770991e 484 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 393 402 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO1827 f597d00f737936c1e3c175836770991e 484 Gene3D G3DSA:3.40.50.300 168 450 4.6E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1827 f597d00f737936c1e3c175836770991e 484 PANTHER PTHR15184 17 108 4.1E-238 T 22-04-2016 YPO1827 f597d00f737936c1e3c175836770991e 484 PANTHER PTHR15184 133 482 4.1E-238 T 22-04-2016 YPO1827 f597d00f737936c1e3c175836770991e 484 SUPERFAMILY SSF52540 138 408 4.5E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1827 f597d00f737936c1e3c175836770991e 484 SMART SM00382 203 386 5.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1827 f597d00f737936c1e3c175836770991e 484 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 18 482 3.6E-187 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO1827 f597d00f737936c1e3c175836770991e 484 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 41 479 1.2E-196 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 PANTHER PTHR11911 1 163 2.2E-228 T 22-04-2016 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 PANTHER PTHR11911 181 345 2.2E-228 T 22-04-2016 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 9.6E-79 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 PANTHER PTHR11911:SF97 1 163 2.2E-228 T 22-04-2016 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 PANTHER PTHR11911:SF97 181 345 2.2E-228 T 22-04-2016 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 PIRSF PIRSF000235 1 347 2.0E-200 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 9.7E-198 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 SMART SM01240 7 344 5.1E-139 T 22-04-2016 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 Gene3D G3DSA:3.20.20.70 2 343 5.4E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.366 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 YPO3428 6e8aaaefb5aacf41f9412dd8ea577aea 347 SUPERFAMILY SSF51412 7 335 3.53E-100 T 22-04-2016 YPO1649 ded581a68c0131ab95fe0ba87c096331 71 Pfam PF14001 YdfZ protein 7 70 1.0E-33 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ YPO1649 ded581a68c0131ab95fe0ba87c096331 71 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 6 70 1.4E-36 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 SUPERFAMILY SSF52540 328 571 3.8E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 SMART SM00382 364 548 1.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 PANTHER PTHR24222:SF24 4 589 0.0 T 22-04-2016 YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 PANTHER PTHR24222 4 589 0.0 T 22-04-2016 YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 Gene3D G3DSA:1.20.1560.10 8 323 1.2E-47 T 22-04-2016 YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 Pfam PF00005 ABC transporter 355 502 6.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 SUPERFAMILY SSF90123 9 330 3.01E-52 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 Gene3D G3DSA:3.40.50.300 338 567 2.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0771 03d94e9411577dd0a0f28f03cbe36c59 590 Pfam PF00664 ABC transporter transmembrane region 23 292 2.7E-21 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO0774 53db80e47d6aebcbeb3ab1d9138c4754 375 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 6.4E-21 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPO0774 53db80e47d6aebcbeb3ab1d9138c4754 375 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 3 355 8.0E-171 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YPO0774 53db80e47d6aebcbeb3ab1d9138c4754 375 PANTHER PTHR22604 1 188 2.5E-28 T 22-04-2016 YPO0774 53db80e47d6aebcbeb3ab1d9138c4754 375 PIRSF PIRSF017494 1 369 5.9E-144 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YPO0774 53db80e47d6aebcbeb3ab1d9138c4754 375 PANTHER PTHR22604:SF123 1 188 2.5E-28 T 22-04-2016 YPO0774 53db80e47d6aebcbeb3ab1d9138c4754 375 Gene3D G3DSA:3.40.50.720 8 139 4.8E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0774 53db80e47d6aebcbeb3ab1d9138c4754 375 SUPERFAMILY SSF51735 6 140 5.15E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1917 f9dadaa92c685bd5d8e84fb86f5e6648 420 SUPERFAMILY SSF56349 98 392 7.65E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPO1917 f9dadaa92c685bd5d8e84fb86f5e6648 420 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 1.0E-17 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YPO1917 f9dadaa92c685bd5d8e84fb86f5e6648 420 Gene3D G3DSA:1.10.443.10 210 386 5.8E-21 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO1917 f9dadaa92c685bd5d8e84fb86f5e6648 420 PANTHER PTHR30629:SF4 1 420 8.0E-189 T 22-04-2016 YPO1917 f9dadaa92c685bd5d8e84fb86f5e6648 420 PANTHER PTHR30629 1 420 8.0E-189 T 22-04-2016 YPO1917 f9dadaa92c685bd5d8e84fb86f5e6648 420 Pfam PF00589 Phage integrase family 225 383 2.7E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO1917 f9dadaa92c685bd5d8e84fb86f5e6648 420 Gene3D G3DSA:1.10.150.130 98 189 2.3E-16 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPO1917 f9dadaa92c685bd5d8e84fb86f5e6648 420 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 98 148 7.6E-5 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YPO1454 5ad080a522d01751a9225692cbaf749e 152 SUPERFAMILY SSF54637 10 148 2.06E-27 T 22-04-2016 IPR029069 HotDog domain YPO1454 5ad080a522d01751a9225692cbaf749e 152 Gene3D G3DSA:3.10.129.10 3 146 1.0E-28 T 22-04-2016 IPR029069 HotDog domain YPO1454 5ad080a522d01751a9225692cbaf749e 152 Pfam PF07977 FabA-like domain 14 143 1.4E-15 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPO1454 5ad080a522d01751a9225692cbaf749e 152 PANTHER PTHR30272 3 142 7.5E-42 T 22-04-2016 YPO1109 83d9049de0a350535a62e1a4492ec766 129 SUPERFAMILY SSF81343 3 129 3.05E-34 T 22-04-2016 YPO1109 83d9049de0a350535a62e1a4492ec766 129 PANTHER PTHR10978:SF4 3 129 3.9E-79 T 22-04-2016 YPO1109 83d9049de0a350535a62e1a4492ec766 129 PANTHER PTHR10978 3 129 3.9E-79 T 22-04-2016 YPO1109 83d9049de0a350535a62e1a4492ec766 129 PIRSF PIRSF000178 2 129 7.0E-32 T 22-04-2016 YPO1109 83d9049de0a350535a62e1a4492ec766 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 4.2E-39 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 YPO1109 83d9049de0a350535a62e1a4492ec766 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 4.4E-29 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 YPO1109 83d9049de0a350535a62e1a4492ec766 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 YPO1109 83d9049de0a350535a62e1a4492ec766 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 YPO1109 83d9049de0a350535a62e1a4492ec766 129 Gene3D G3DSA:1.20.1300.10 3 129 1.2E-41 T 22-04-2016 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 SUPERFAMILY SSF63380 105 272 4.86E-35 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 Gene3D G3DSA:2.40.30.10 124 264 6.0E-57 T 22-04-2016 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PIRSF PIRSF000044 1 407 7.1E-218 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 114 1.8E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.818 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 Gene3D G3DSA:3.40.50.80 276 392 9.0E-44 T 22-04-2016 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 SUPERFAMILY SSF52343 255 402 1.96E-38 T 22-04-2016 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 3.5E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 Pfam PF00970 Oxidoreductase FAD-binding domain 202 266 1.0E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 SUPERFAMILY SSF54292 35 124 1.06E-22 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PANTHER PTHR19370 62 176 1.0E-146 T 22-04-2016 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PANTHER PTHR19370 205 407 1.0E-146 T 22-04-2016 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PANTHER PTHR19370:SF32 62 176 1.0E-146 T 22-04-2016 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PANTHER PTHR19370:SF32 205 407 1.0E-146 T 22-04-2016 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 Gene3D G3DSA:3.10.20.30 34 123 3.3E-23 T 22-04-2016 IPR012675 Beta-grasp domain YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 1.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YPO3235 5f76db85061ae0ec18f77df5f6185b7d 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 9.4E-236 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YPO1313 1c9966eaec7ede3d8662465b82980ef4 665 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 22-04-2016 IPR010916 TonB box, conserved site YPO1313 1c9966eaec7ede3d8662465b82980ef4 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 6.9E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO1313 1c9966eaec7ede3d8662465b82980ef4 665 Gene3D G3DSA:2.170.130.10 32 165 2.4E-40 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO1313 1c9966eaec7ede3d8662465b82980ef4 665 PANTHER PTHR30069:SF2 10 663 1.1E-154 T 22-04-2016 YPO1313 1c9966eaec7ede3d8662465b82980ef4 665 PANTHER PTHR30069 10 663 1.1E-154 T 22-04-2016 YPO1313 1c9966eaec7ede3d8662465b82980ef4 665 Pfam PF00593 TonB dependent receptor 400 663 4.5E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO1313 1c9966eaec7ede3d8662465b82980ef4 665 SUPERFAMILY SSF56935 39 665 2.52E-126 T 22-04-2016 YPO1313 1c9966eaec7ede3d8662465b82980ef4 665 Gene3D G3DSA:2.40.170.20 166 665 8.8E-101 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO3014 b94666000c8716b4c892250dc298b0a2 277 PANTHER PTHR30406 7 277 3.1E-211 T 22-04-2016 YPO3014 b94666000c8716b4c892250dc298b0a2 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 3.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3014 b94666000c8716b4c892250dc298b0a2 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 269 2.2E-111 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 YPO3014 b94666000c8716b4c892250dc298b0a2 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 1.1E-114 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 YPO3014 b94666000c8716b4c892250dc298b0a2 277 SUPERFAMILY SSF161098 17 264 7.59E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3014 b94666000c8716b4c892250dc298b0a2 277 PANTHER PTHR30406:SF7 7 277 3.1E-211 T 22-04-2016 YPO3014 b94666000c8716b4c892250dc298b0a2 277 Gene3D G3DSA:1.10.3720.10 20 273 9.9E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2626 cd0ebf571459666db9e506de4e8ed379 381 PANTHER PTHR11113 1 380 2.1E-181 T 22-04-2016 YPO2626 cd0ebf571459666db9e506de4e8ed379 381 SUPERFAMILY SSF51556 54 350 2.77E-100 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO2626 cd0ebf571459666db9e506de4e8ed379 381 Gene3D G3DSA:2.30.40.10 350 366 2.9E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO2626 cd0ebf571459666db9e506de4e8ed379 381 Gene3D G3DSA:2.30.40.10 2 54 2.9E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO2626 cd0ebf571459666db9e506de4e8ed379 381 Pfam PF01979 Amidohydrolase family 50 379 1.6E-41 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPO2626 cd0ebf571459666db9e506de4e8ed379 381 Gene3D G3DSA:3.20.20.140 55 349 8.5E-97 T 22-04-2016 YPO2626 cd0ebf571459666db9e506de4e8ed379 381 PANTHER PTHR11113:SF7 1 380 2.1E-181 T 22-04-2016 YPO2626 cd0ebf571459666db9e506de4e8ed379 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 2.4E-163 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YPO2626 cd0ebf571459666db9e506de4e8ed379 381 SUPERFAMILY SSF51338 1 53 2.64E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO2626 cd0ebf571459666db9e506de4e8ed379 381 PIRSF PIRSF038994 1 381 6.3E-116 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YPO3528 7d3845f09043e054cfdbc33442365df1 187 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 183 2.1E-76 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPO3528 7d3845f09043e054cfdbc33442365df1 187 SUPERFAMILY SSF52833 49 181 2.87E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3528 7d3845f09043e054cfdbc33442365df1 187 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 185 2.7E-81 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPO3528 7d3845f09043e054cfdbc33442365df1 187 Gene3D G3DSA:3.40.30.10 44 181 2.0E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3016 5567f6097df05e4895f05983cfa352ff 510 Hamap MF_01238 Putative sialic acid transporter [nanT]. 14 505 47.11 T 22-04-2016 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 YPO3016 5567f6097df05e4895f05983cfa352ff 510 SUPERFAMILY SSF103473 281 469 3.27E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3016 5567f6097df05e4895f05983cfa352ff 510 SUPERFAMILY SSF103473 20 223 3.27E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3016 5567f6097df05e4895f05983cfa352ff 510 PANTHER PTHR23508 1 240 0.0 T 22-04-2016 YPO3016 5567f6097df05e4895f05983cfa352ff 510 PANTHER PTHR23508 283 495 0.0 T 22-04-2016 YPO3016 5567f6097df05e4895f05983cfa352ff 510 Gene3D G3DSA:1.20.1250.20 290 467 1.3E-17 T 22-04-2016 YPO3016 5567f6097df05e4895f05983cfa352ff 510 PANTHER PTHR23508:SF3 1 240 0.0 T 22-04-2016 YPO3016 5567f6097df05e4895f05983cfa352ff 510 PANTHER PTHR23508:SF3 283 495 0.0 T 22-04-2016 YPO3016 5567f6097df05e4895f05983cfa352ff 510 Gene3D G3DSA:1.20.1250.20 29 220 4.8E-37 T 22-04-2016 YPO3016 5567f6097df05e4895f05983cfa352ff 510 Pfam PF07690 Major Facilitator Superfamily 39 308 3.1E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO0381 7745485a985630edd20fe351112049f0 246 SUPERFAMILY SSF55315 2 75 4.94E-20 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YPO0381 7745485a985630edd20fe351112049f0 246 Gene3D G3DSA:3.30.1330.30 1 75 1.2E-26 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YPO0381 7745485a985630edd20fe351112049f0 246 SUPERFAMILY SSF75217 69 243 5.62E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPO0381 7745485a985630edd20fe351112049f0 246 Gene3D G3DSA:3.40.1280.10 93 243 5.8E-54 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0381 7745485a985630edd20fe351112049f0 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 2.8E-19 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YPO0381 7745485a985630edd20fe351112049f0 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 6.4E-90 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 YPO0381 7745485a985630edd20fe351112049f0 246 SMART SM00967 4 80 1.1E-21 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YPO0381 7745485a985630edd20fe351112049f0 246 PANTHER PTHR12029 3 243 2.5E-81 T 22-04-2016 YPO0381 7745485a985630edd20fe351112049f0 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.348 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YPO0381 7745485a985630edd20fe351112049f0 246 Pfam PF00588 SpoU rRNA Methylase family 96 236 9.0E-40 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 PRINTS PR01374 Gram-negative bacterial tonB protein signature 169 190 7.7E-30 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 PRINTS PR01374 Gram-negative bacterial tonB protein signature 109 119 7.7E-30 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 PRINTS PR01374 Gram-negative bacterial tonB protein signature 209 226 7.7E-30 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 PRINTS PR01374 Gram-negative bacterial tonB protein signature 190 208 7.7E-30 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 Pfam PF16031 TonB N-terminal region 36 171 1.6E-25 T 22-04-2016 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 175 245 3.6E-18 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 Gene3D G3DSA:3.30.1150.10 172 248 1.1E-8 T 22-04-2016 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 174 235 5.7E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 PANTHER PTHR33446:SF1 11 252 6.7E-67 T 22-04-2016 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 PANTHER PTHR33446 11 252 6.7E-67 T 22-04-2016 YPO2193 9d7264bc3ea2bbdc747d9328def3e045 252 SUPERFAMILY SSF74653 170 237 1.26E-18 T 22-04-2016 YPO1509 5fc8588eddcfe547dde6fd80005ee599 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 2.4E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO1509 5fc8588eddcfe547dde6fd80005ee599 336 PANTHER PTHR32196 1 336 6.0E-236 T 22-04-2016 YPO1509 5fc8588eddcfe547dde6fd80005ee599 336 PANTHER PTHR32196:SF18 1 336 6.0E-236 T 22-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 YPO2141 8430b46a4dc92de76785c9b12d5c2cf8 176 PANTHER PTHR36570 1 176 3.6E-108 T 22-04-2016 YPO2141 8430b46a4dc92de76785c9b12d5c2cf8 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 2.0E-46 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 YPO2141 8430b46a4dc92de76785c9b12d5c2cf8 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.731 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB YPO2141 8430b46a4dc92de76785c9b12d5c2cf8 176 Gene3D G3DSA:1.20.1550.10 1 174 4.1E-71 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain YPO2141 8430b46a4dc92de76785c9b12d5c2cf8 176 PANTHER PTHR36570:SF2 1 176 3.6E-108 T 22-04-2016 YPO2141 8430b46a4dc92de76785c9b12d5c2cf8 176 SUPERFAMILY SSF158442 15 161 7.06E-47 T 22-04-2016 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 PANTHER PTHR24423:SF488 11 349 4.4E-181 T 22-04-2016 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 Gene3D G3DSA:3.30.450.20 11 99 5.0E-19 T 22-04-2016 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 SUPERFAMILY SSF55874 198 346 4.32E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 SUPERFAMILY SSF47384 121 190 7.46E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 Gene3D G3DSA:1.10.287.130 129 186 9.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 SMART SM00091 7 75 6.2E-7 T 22-04-2016 IPR000014 PAS domain YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 SMART SM00388 129 194 1.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 9.0E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 Pfam PF00989 PAS fold 11 98 4.2E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 SUPERFAMILY SSF55785 11 97 1.35E-5 T 22-04-2016 IPR000014 PAS domain YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 2.28E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 2.28E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 2.28E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 Gene3D G3DSA:3.30.565.10 198 348 8.9E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 PANTHER PTHR24423 11 349 4.4E-181 T 22-04-2016 YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 SMART SM00387 233 349 8.1E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0023 9120b31d582b7e6ed16a3c0bc6d56630 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 190 4.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2898 7c491874a5677239767aaee98d5a7fea 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 2.3E-87 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPO2898 7c491874a5677239767aaee98d5a7fea 257 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.0E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YPO2898 7c491874a5677239767aaee98d5a7fea 257 PIRSF PIRSF004808 1 246 2.7E-77 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YPO2898 7c491874a5677239767aaee98d5a7fea 257 Gene3D G3DSA:3.40.1280.10 4 173 2.7E-32 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO2898 7c491874a5677239767aaee98d5a7fea 257 PANTHER PTHR12029 3 180 4.9E-50 T 22-04-2016 YPO2898 7c491874a5677239767aaee98d5a7fea 257 SUPERFAMILY SSF75217 3 170 5.95E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 Pfam PF00107 Zinc-binding dehydrogenase 202 318 1.2E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 Gene3D G3DSA:3.90.180.10 10 192 1.6E-48 T 22-04-2016 IPR011032 GroES-like YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 PANTHER PTHR11695 30 369 5.0E-201 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 SMART SM00829 26 366 0.0013 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 SUPERFAMILY SSF51735 168 321 2.14E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 43 154 8.1E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 SUPERFAMILY SSF50129 18 197 6.45E-47 T 22-04-2016 IPR011032 GroES-like YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 PANTHER PTHR11695:SF583 30 369 5.0E-201 T 22-04-2016 YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 85 99 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 YPO3352 c1eff63ed71c29b33b78eb59d217df35 371 Gene3D G3DSA:3.40.50.720 193 314 5.5E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0892 e23dede0e8320359d4257ade491ec939 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 2.1E-24 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YPO0892 e23dede0e8320359d4257ade491ec939 299 PANTHER PTHR30349:SF5 8 299 4.3E-130 T 22-04-2016 YPO0892 e23dede0e8320359d4257ade491ec939 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 299 31.583 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD YPO0892 e23dede0e8320359d4257ade491ec939 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 63.924 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 YPO0892 e23dede0e8320359d4257ade491ec939 299 Gene3D G3DSA:1.10.150.130 7 100 1.7E-29 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPO0892 e23dede0e8320359d4257ade491ec939 299 PANTHER PTHR30349 8 299 4.3E-130 T 22-04-2016 YPO0892 e23dede0e8320359d4257ade491ec939 299 Pfam PF00589 Phage integrase family 114 285 7.7E-56 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO0892 e23dede0e8320359d4257ade491ec939 299 SUPERFAMILY SSF56349 107 297 2.44E-58 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPO0892 e23dede0e8320359d4257ade491ec939 299 Gene3D G3DSA:1.10.443.10 114 290 1.3E-58 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO0892 e23dede0e8320359d4257ade491ec939 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 3.6E-119 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 YPO0892 e23dede0e8320359d4257ade491ec939 299 SUPERFAMILY SSF47823 5 101 1.29E-36 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PANTHER PTHR24322 13 140 3.0E-88 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PANTHER PTHR24322 156 187 3.0E-88 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 Gene3D G3DSA:3.40.50.720 4 250 1.8E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 1.9E-56 T 22-04-2016 YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PANTHER PTHR24322:SF402 13 140 3.0E-88 T 22-04-2016 YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PANTHER PTHR24322:SF402 156 187 3.0E-88 T 22-04-2016 YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 4 251 9.6E-133 T 22-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO0839 51b9a581c2a9fd7624bc1cec5e15eba0 251 SUPERFAMILY SSF51735 4 250 3.61E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1639 dee16195010e0ca4b91cb0a443b34623 148 SUPERFAMILY SSF55811 2 132 5.42E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO1639 dee16195010e0ca4b91cb0a443b34623 148 Pfam PF00293 NUDIX domain 4 114 8.0E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO1639 dee16195010e0ca4b91cb0a443b34623 148 Gene3D G3DSA:3.90.79.10 2 140 2.1E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO1639 dee16195010e0ca4b91cb0a443b34623 148 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPO1639 dee16195010e0ca4b91cb0a443b34623 148 PANTHER PTHR22769:SF14 1 145 7.4E-36 T 22-04-2016 YPO1639 dee16195010e0ca4b91cb0a443b34623 148 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase YPO1639 dee16195010e0ca4b91cb0a443b34623 148 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase YPO1639 dee16195010e0ca4b91cb0a443b34623 148 PANTHER PTHR22769 1 145 7.4E-36 T 22-04-2016 YPO1046 1da0de38868595c37a500222ecedbddd 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 3.4E-104 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YPO1046 1da0de38868595c37a500222ecedbddd 241 Gene3D G3DSA:3.40.1160.10 3 239 1.3E-86 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO1046 1da0de38868595c37a500222ecedbddd 241 SUPERFAMILY SSF53633 7 239 6.28E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO1046 1da0de38868595c37a500222ecedbddd 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.036 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YPO1046 1da0de38868595c37a500222ecedbddd 241 PIRSF PIRSF005650 4 241 2.3E-90 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YPO1046 1da0de38868595c37a500222ecedbddd 241 Pfam PF00696 Amino acid kinase family 11 219 8.8E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO1046 1da0de38868595c37a500222ecedbddd 241 PANTHER PTHR21499 4 239 2.9E-113 T 22-04-2016 YPO1046 1da0de38868595c37a500222ecedbddd 241 PANTHER PTHR21499:SF23 4 239 2.9E-113 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YPO2828 b39e8291247acaa3c00f63a618ce7f1c 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 3.6E-153 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO2828 b39e8291247acaa3c00f63a618ce7f1c 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 1.7E-37 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2828 b39e8291247acaa3c00f63a618ce7f1c 347 SUPERFAMILY SSF55326 7 170 4.19E-53 T 22-04-2016 YPO2828 b39e8291247acaa3c00f63a618ce7f1c 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 2.5E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPO2828 b39e8291247acaa3c00f63a618ce7f1c 347 Gene3D G3DSA:3.30.1330.10 22 170 5.8E-64 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YPO2828 b39e8291247acaa3c00f63a618ce7f1c 347 Gene3D G3DSA:3.90.650.10 171 344 5.2E-69 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2828 b39e8291247acaa3c00f63a618ce7f1c 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 345 47.303 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YPO2828 b39e8291247acaa3c00f63a618ce7f1c 347 SUPERFAMILY SSF56042 171 342 1.14E-63 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YPO2828 b39e8291247acaa3c00f63a618ce7f1c 347 PANTHER PTHR10520 4 346 8.1E-231 T 22-04-2016 YPO3578 9e2c20bd46ee3d10fe826b7d9761d384 187 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 25 177 4.9E-69 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPO3578 9e2c20bd46ee3d10fe826b7d9761d384 187 PIRSF PIRSF006118 12 187 9.7E-73 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPO3578 9e2c20bd46ee3d10fe826b7d9761d384 187 Gene3D G3DSA:3.40.50.1000 17 179 1.2E-47 T 22-04-2016 IPR023214 HAD-like domain YPO3578 9e2c20bd46ee3d10fe826b7d9761d384 187 SUPERFAMILY SSF56784 21 179 2.93E-41 T 22-04-2016 IPR023214 HAD-like domain YPO3578 9e2c20bd46ee3d10fe826b7d9761d384 187 PANTHER PTHR21485 9 183 2.8E-70 T 22-04-2016 YPO3578 9e2c20bd46ee3d10fe826b7d9761d384 187 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 157 3.3E-10 T 22-04-2016 IPR023214 HAD-like domain YPO3547 911bebb9c04da28bcb1be81005777f26 299 SUPERFAMILY SSF53790 13 232 3.79E-83 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPO3547 911bebb9c04da28bcb1be81005777f26 299 PANTHER PTHR21091 12 233 3.5E-93 T 22-04-2016 YPO3547 911bebb9c04da28bcb1be81005777f26 299 PIRSF PIRSF005917 2 288 6.3E-107 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO3547 911bebb9c04da28bcb1be81005777f26 299 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 5.4E-26 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YPO3547 911bebb9c04da28bcb1be81005777f26 299 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.28 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO3547 911bebb9c04da28bcb1be81005777f26 299 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 1.1E-110 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO3547 911bebb9c04da28bcb1be81005777f26 299 PANTHER PTHR21091:SF18 12 233 3.5E-93 T 22-04-2016 YPO3547 911bebb9c04da28bcb1be81005777f26 299 Gene3D G3DSA:3.40.1010.10 13 121 1.2E-17 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YPO3547 911bebb9c04da28bcb1be81005777f26 299 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YPO3547 911bebb9c04da28bcb1be81005777f26 299 Gene3D G3DSA:3.30.950.10 122 235 1.4E-41 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YPO0991 a62364edb011859a5431ca63182a7458 316 SMART SM01006 147 194 6.8E-17 T 22-04-2016 IPR019432 Siderophore biosynthesis protein, conserved domain YPO0991 a62364edb011859a5431ca63182a7458 316 PANTHER PTHR31438 1 316 7.8E-265 T 22-04-2016 YPO0991 a62364edb011859a5431ca63182a7458 316 SUPERFAMILY SSF55729 114 307 4.64E-55 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO0991 a62364edb011859a5431ca63182a7458 316 Gene3D G3DSA:3.40.630.30 124 312 2.1E-65 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO0991 a62364edb011859a5431ca63182a7458 316 PANTHER PTHR31438:SF5 1 316 7.8E-265 T 22-04-2016 YPO0991 a62364edb011859a5431ca63182a7458 316 Pfam PF13523 Acetyltransferase (GNAT) domain 151 295 3.3E-49 T 22-04-2016 YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 299 362 2.0E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 SUPERFAMILY SSF141673 5 133 2.62E-29 T 22-04-2016 YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 Gene3D G3DSA:3.10.20.30 282 367 1.9E-19 T 22-04-2016 IPR012675 Beta-grasp domain YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 PANTHER PTHR14237 2 267 5.6E-101 T 22-04-2016 YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 Pfam PF03473 MOSC domain 140 262 2.7E-28 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 Pfam PF03476 MOSC N-terminal beta barrel domain 3 117 2.4E-29 T 22-04-2016 IPR005303 MOSC, N-terminal beta barrel YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 SUPERFAMILY SSF54292 283 367 1.14E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 SUPERFAMILY SSF50800 148 264 8.37E-17 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YPO1417 85563fdb6234f3cc98aaa9c88ad1bda0 370 SUPERFAMILY SSF50800 3 51 8.37E-17 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YPO0480 a25bff66703a6ac962407a3fe941c663 273 Gene3D G3DSA:3.40.50.720 4 167 6.6E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0480 a25bff66703a6ac962407a3fe941c663 273 SUPERFAMILY SSF51735 4 130 4.17E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0480 a25bff66703a6ac962407a3fe941c663 273 SUPERFAMILY SSF51735 240 272 4.17E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0480 a25bff66703a6ac962407a3fe941c663 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 6.9E-42 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0480 a25bff66703a6ac962407a3fe941c663 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 2.8E-42 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0480 a25bff66703a6ac962407a3fe941c663 273 PIRSF PIRSF000161 4 272 1.7E-89 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0480 a25bff66703a6ac962407a3fe941c663 273 SUPERFAMILY SSF55347 131 240 1.37E-37 T 22-04-2016 YPO0480 a25bff66703a6ac962407a3fe941c663 273 PANTHER PTHR20836:SF0 3 273 3.6E-105 T 22-04-2016 YPO0480 a25bff66703a6ac962407a3fe941c663 273 PANTHER PTHR20836 3 273 3.6E-105 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0480 a25bff66703a6ac962407a3fe941c663 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0480 a25bff66703a6ac962407a3fe941c663 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.085 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0480 a25bff66703a6ac962407a3fe941c663 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 268 3.6E-105 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO0535 95d7baf767990c8182d47b009afbfcec 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 1.9E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0535 95d7baf767990c8182d47b009afbfcec 318 SUPERFAMILY SSF46785 22 101 7.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0535 95d7baf767990c8182d47b009afbfcec 318 PANTHER PTHR30118 16 311 6.1E-160 T 22-04-2016 YPO0535 95d7baf767990c8182d47b009afbfcec 318 Pfam PF03466 LysR substrate binding domain 119 311 8.7E-20 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0535 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:3.40.190.10 191 284 1.3E-16 T 22-04-2016 YPO0535 95d7baf767990c8182d47b009afbfcec 318 PANTHER PTHR30118:SF6 16 311 6.1E-160 T 22-04-2016 YPO0535 95d7baf767990c8182d47b009afbfcec 318 SUPERFAMILY SSF53850 108 312 1.71E-42 T 22-04-2016 YPO0535 95d7baf767990c8182d47b009afbfcec 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 4.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0535 95d7baf767990c8182d47b009afbfcec 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0535 95d7baf767990c8182d47b009afbfcec 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 4.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0535 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:3.40.190.10 290 314 4.9E-21 T 22-04-2016 YPO0535 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:3.40.190.10 108 190 4.9E-21 T 22-04-2016 YPO0535 95d7baf767990c8182d47b009afbfcec 318 Gene3D G3DSA:1.10.10.10 21 103 4.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1420 215bd86943ef9345d4f4a0c8441c1832 428 PANTHER PTHR30462 1 428 1.2E-291 T 22-04-2016 YPO1420 215bd86943ef9345d4f4a0c8441c1832 428 PANTHER PTHR30462:SF3 1 428 1.2E-291 T 22-04-2016 YPO1420 215bd86943ef9345d4f4a0c8441c1832 428 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 13 414 1.2E-158 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 YPO1420 215bd86943ef9345d4f4a0c8441c1832 428 Pfam PF04403 Paraquat-inducible protein A 259 415 1.2E-53 T 22-04-2016 IPR007498 Paraquat-inducible protein A YPO1420 215bd86943ef9345d4f4a0c8441c1832 428 Pfam PF04403 Paraquat-inducible protein A 56 206 4.9E-40 T 22-04-2016 IPR007498 Paraquat-inducible protein A YPO3322 9720b285d9e38ea2a6db57275ad6418c 236 PANTHER PTHR34227 16 236 2.2E-106 T 22-04-2016 YPO3322 9720b285d9e38ea2a6db57275ad6418c 236 Gene3D G3DSA:1.10.3480.10 17 236 1.1E-56 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPO3322 9720b285d9e38ea2a6db57275ad6418c 236 PIRSF PIRSF004690 19 236 9.4E-63 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type YPO3322 9720b285d9e38ea2a6db57275ad6418c 236 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 6 236 42.682 T 22-04-2016 IPR028611 Tat proofreading chaperone DmsD GO:0005048 YPO3322 9720b285d9e38ea2a6db57275ad6418c 236 Pfam PF02613 Nitrate reductase delta subunit 80 192 2.9E-20 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPO3322 9720b285d9e38ea2a6db57275ad6418c 236 SUPERFAMILY SSF89155 18 235 3.92E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPO3322 9720b285d9e38ea2a6db57275ad6418c 236 PANTHER PTHR34227:SF5 16 236 2.2E-106 T 22-04-2016 YPO3356 a818b1fe1d8017833928d555ecd44f5f 333 Pfam PF01476 LysM domain 79 120 6.4E-8 T 22-04-2016 IPR018392 LysM domain YPO3356 a818b1fe1d8017833928d555ecd44f5f 333 PANTHER PTHR21666 191 331 3.7E-61 T 22-04-2016 YPO3356 a818b1fe1d8017833928d555ecd44f5f 333 Gene3D G3DSA:2.70.70.10 206 331 1.7E-40 T 22-04-2016 YPO3356 a818b1fe1d8017833928d555ecd44f5f 333 Pfam PF01551 Peptidase family M23 233 326 5.7E-32 T 22-04-2016 IPR016047 Peptidase M23 YPO3356 a818b1fe1d8017833928d555ecd44f5f 333 SMART SM00257 78 122 5.4E-10 T 22-04-2016 IPR018392 LysM domain YPO3356 a818b1fe1d8017833928d555ecd44f5f 333 SUPERFAMILY SSF51261 78 330 1.88E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif YPO3356 a818b1fe1d8017833928d555ecd44f5f 333 Gene3D G3DSA:3.10.350.10 77 121 3.6E-11 T 22-04-2016 IPR018392 LysM domain YPO3356 a818b1fe1d8017833928d555ecd44f5f 333 PANTHER PTHR21666:SF222 191 331 3.7E-61 T 22-04-2016 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 SUPERFAMILY SSF53822 60 333 3.34E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 SUPERFAMILY SSF47413 1 59 3.38E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 SMART SM00354 1 71 6.2E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PANTHER PTHR30146 1 333 1.7E-278 T 22-04-2016 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Pfam PF13377 Periplasmic binding protein-like domain 168 329 3.6E-33 T 22-04-2016 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Gene3D G3DSA:3.40.50.2300 167 330 9.2E-50 T 22-04-2016 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Gene3D G3DSA:3.40.50.2300 58 166 3.9E-47 T 22-04-2016 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 Gene3D G3DSA:1.10.260.40 2 57 6.9E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0795 3b51a70ef6ef9876b1f8ee21f8837ee4 340 PANTHER PTHR30146:SF57 1 333 1.7E-278 T 22-04-2016 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 8.8E-115 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 SUPERFAMILY SSF51569 4 357 4.98E-132 T 22-04-2016 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 3.7E-89 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 Gene3D G3DSA:3.20.20.70 11 355 2.5E-124 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 PANTHER PTHR30559 2 359 5.3E-250 T 22-04-2016 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 4.0E-190 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 PIRSF PIRSF001359 13 359 5.0E-103 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO0920 1890b72a315aa42297ab43aec0f2dcee 359 PANTHER PTHR30559:SF0 2 359 5.3E-250 T 22-04-2016 YPO3331 a9281168d9362c99f13491e8dd5841de 329 PANTHER PTHR32196:SF35 3 323 1.0E-142 T 22-04-2016 YPO3331 a9281168d9362c99f13491e8dd5841de 329 PANTHER PTHR32196 3 323 1.0E-142 T 22-04-2016 YPO3331 a9281168d9362c99f13491e8dd5841de 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 5.8E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3962 c85ee702d511a1216898b04ded8720e9 314 PANTHER PTHR32196 1 305 1.1E-162 T 22-04-2016 YPO3962 c85ee702d511a1216898b04ded8720e9 314 PANTHER PTHR32196:SF41 1 305 1.1E-162 T 22-04-2016 YPO3962 c85ee702d511a1216898b04ded8720e9 314 Gene3D G3DSA:3.40.50.2300 147 308 7.5E-45 T 22-04-2016 YPO3962 c85ee702d511a1216898b04ded8720e9 314 SUPERFAMILY SSF53822 7 308 3.53E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO3962 c85ee702d511a1216898b04ded8720e9 314 Gene3D G3DSA:3.40.50.2300 29 146 9.6E-38 T 22-04-2016 YPO3962 c85ee702d511a1216898b04ded8720e9 314 Pfam PF13407 Periplasmic binding protein domain 30 286 1.1E-55 T 22-04-2016 IPR025997 Periplasmic binding protein YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.1E-169 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 Hamap MF_00970 Ribonuclease E [rne]. 1 1207 41.615 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 Gene3D G3DSA:2.40.50.140 31 124 3.9E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 SUPERFAMILY SSF50249 40 124 8.88E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 Pfam PF10150 Ribonuclease E/G family 121 391 4.9E-92 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 Pfam PF00575 S1 RNA binding domain 36 118 1.5E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 SMART SM00316 37 119 8.7E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1183 1218 6.8E-15 T 22-04-2016 IPR021968 Polyribonucleotide phosphorylase C-terminal YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 PANTHER PTHR30001 1 839 0.0 T 22-04-2016 YPO1590 7557a88f1e2dba552598c9dbff766cb0 1221 PANTHER PTHR30001:SF1 1 839 0.0 T 22-04-2016 YPO3123 6cdaa44dc456be71882d41e11167a7e4 187 PANTHER PTHR32315 1 187 3.4E-89 T 22-04-2016 YPO3123 6cdaa44dc456be71882d41e11167a7e4 187 Gene3D G3DSA:3.40.50.2020 11 185 1.7E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO3123 6cdaa44dc456be71882d41e11167a7e4 187 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 15 184 38.687 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 YPO3123 6cdaa44dc456be71882d41e11167a7e4 187 Pfam PF00156 Phosphoribosyl transferase domain 35 164 1.7E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPO3123 6cdaa44dc456be71882d41e11167a7e4 187 SUPERFAMILY SSF53271 17 184 1.7E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO3123 6cdaa44dc456be71882d41e11167a7e4 187 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 183 2.0E-73 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 YPO3791 bfa03adf71fab1f950b2783945660782 308 PANTHER PTHR31752:SF13 102 299 3.1E-76 T 22-04-2016 YPO3791 bfa03adf71fab1f950b2783945660782 308 PANTHER PTHR31752 102 299 3.1E-76 T 22-04-2016 YPO3791 bfa03adf71fab1f950b2783945660782 308 Pfam PF03547 Membrane transport protein 169 298 3.1E-13 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YPO2294 3bd5a2fbb4a68bc35523cc35ecf1db26 100 PANTHER PTHR30239:SF4 1 100 1.6E-60 T 22-04-2016 YPO2294 3bd5a2fbb4a68bc35523cc35ecf1db26 100 SUPERFAMILY SSF55021 9 82 2.52E-16 T 22-04-2016 YPO2294 3bd5a2fbb4a68bc35523cc35ecf1db26 100 PANTHER PTHR30239 1 100 1.6E-60 T 22-04-2016 YPO2294 3bd5a2fbb4a68bc35523cc35ecf1db26 100 Gene3D G3DSA:3.30.70.260 9 82 1.4E-20 T 22-04-2016 YPO2294 3bd5a2fbb4a68bc35523cc35ecf1db26 100 Pfam PF13710 ACT domain 19 79 3.3E-9 T 22-04-2016 YPO2294 3bd5a2fbb4a68bc35523cc35ecf1db26 100 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 16 79 3.0E-15 T 22-04-2016 YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 PANTHER PTHR11544:SF54 1 70 2.9E-48 T 22-04-2016 YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 PIRSF PIRSF002599 1 70 1.1E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.0E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 PRINTS PR00050 Cold shock protein signature 43 61 1.8E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 PRINTS PR00050 Cold shock protein signature 7 22 1.8E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 PRINTS PR00050 Cold shock protein signature 28 37 1.8E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 SUPERFAMILY SSF50249 3 69 5.49E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 SMART SM00357 6 70 5.2E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 Gene3D G3DSA:2.40.50.140 5 68 1.6E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3644 79ee599b5c8567c7d3bf9438f63c0273 70 PANTHER PTHR11544 1 70 2.9E-48 T 22-04-2016 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.6E-24 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 SUPERFAMILY SSF55681 71 268 3.23E-59 T 22-04-2016 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 Gene3D G3DSA:3.30.930.10 76 269 1.0E-60 T 22-04-2016 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 Gene3D G3DSA:1.10.10.10 3 62 1.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3759 4f8e2957bedac85fc876cee3507fac49 319 Gene3D G3DSA:2.30.30.100 271 318 2.1E-24 T 22-04-2016 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.823 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 73 5.9E-24 T 22-04-2016 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 SUPERFAMILY SSF46785 8 60 1.61E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3759 4f8e2957bedac85fc876cee3507fac49 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 7.8E-79 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 SUPERFAMILY SSF50037 271 317 6.87E-12 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal YPO3759 4f8e2957bedac85fc876cee3507fac49 319 PANTHER PTHR12835 8 317 7.8E-102 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 Pfam PF08279 HTH domain 14 58 9.4E-10 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 YPO3759 4f8e2957bedac85fc876cee3507fac49 319 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 1.3E-13 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 YPO3851 bdfddabf9493a5d903da4658436c649f 374 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 32 362 4.2E-145 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX YPO3851 bdfddabf9493a5d903da4658436c649f 374 PANTHER PTHR38043 1 374 2.6E-122 T 22-04-2016 YPO1761 31daabd019993619b51f68e1104b9062 210 PANTHER PTHR11820 1 204 1.8E-35 T 22-04-2016 YPO1761 31daabd019993619b51f68e1104b9062 210 PANTHER PTHR11820:SF8 1 204 1.8E-35 T 22-04-2016 YPO1761 31daabd019993619b51f68e1104b9062 210 SUPERFAMILY SSF56529 2 204 2.88E-51 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1761 31daabd019993619b51f68e1104b9062 210 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 5.0E-71 T 22-04-2016 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 YPO1761 31daabd019993619b51f68e1104b9062 210 Gene3D G3DSA:3.90.850.10 3 206 6.6E-45 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1761 31daabd019993619b51f68e1104b9062 210 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 203 1.9E-31 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO0490 02f7c4efabb47489864b000aa6548b27 289 Pfam PF00149 Calcineurin-like phosphoesterase 2 127 3.2E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPO0490 02f7c4efabb47489864b000aa6548b27 289 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 275 3.3E-148 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YPO0490 02f7c4efabb47489864b000aa6548b27 289 PANTHER PTHR24032 1 278 2.8E-179 T 22-04-2016 YPO0490 02f7c4efabb47489864b000aa6548b27 289 SUPERFAMILY SSF56300 1 258 9.72E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO0490 02f7c4efabb47489864b000aa6548b27 289 PIRSF PIRSF000903 1 275 1.2E-121 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YPO0490 02f7c4efabb47489864b000aa6548b27 289 PANTHER PTHR24032:SF27 1 278 2.8E-179 T 22-04-2016 YPO0490 02f7c4efabb47489864b000aa6548b27 289 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.457 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YPO0490 02f7c4efabb47489864b000aa6548b27 289 Gene3D G3DSA:3.60.21.10 1 132 5.5E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO0490 02f7c4efabb47489864b000aa6548b27 289 Gene3D G3DSA:3.60.21.10 169 272 5.5E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO2608 4a7058844bf40f257f761f6ab510fb20 344 Gene3D G3DSA:3.40.50.300 1 140 5.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2608 4a7058844bf40f257f761f6ab510fb20 344 PANTHER PTHR34388 1 342 5.3E-93 T 22-04-2016 YPO2608 4a7058844bf40f257f761f6ab510fb20 344 Gene3D G3DSA:1.10.8.60 143 222 1.3E-37 T 22-04-2016 YPO2608 4a7058844bf40f257f761f6ab510fb20 344 SUPERFAMILY SSF48019 212 335 4.93E-36 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YPO2608 4a7058844bf40f257f761f6ab510fb20 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 9.1E-64 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO2608 4a7058844bf40f257f761f6ab510fb20 344 SUPERFAMILY SSF52540 1 210 1.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2608 4a7058844bf40f257f761f6ab510fb20 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 3.1E-44 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 YPO2608 4a7058844bf40f257f761f6ab510fb20 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 8.9E-102 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 YPO2608 4a7058844bf40f257f761f6ab510fb20 344 Gene3D G3DSA:1.20.272.20 223 341 1.8E-52 T 22-04-2016 YPO1571 37a2528ccb1eefb1cb0910c55fa859db 476 PIRSF PIRSF006603 21 472 1.0E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO1571 37a2528ccb1eefb1cb0910c55fa859db 476 Pfam PF01554 MatE 41 201 2.1E-35 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO1571 37a2528ccb1eefb1cb0910c55fa859db 476 Pfam PF01554 MatE 271 432 3.0E-19 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO1571 37a2528ccb1eefb1cb0910c55fa859db 476 PANTHER PTHR11206:SF95 8 468 1.2E-109 T 22-04-2016 YPO1571 37a2528ccb1eefb1cb0910c55fa859db 476 TIGRFAM TIGR00797 matE: MATE efflux family protein 41 445 3.6E-63 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO1571 37a2528ccb1eefb1cb0910c55fa859db 476 PANTHER PTHR11206 8 468 1.2E-109 T 22-04-2016 YPO2486 7a18fc4a49300f233d513d0d3cf8d6b2 677 Pfam PF04829 Pre-toxin domain with VENN motif 376 426 3.6E-23 T 22-04-2016 IPR006914 VENN motif-containing domain YPO1152 0d8b3798d9e269d2bfb36d2ed7d6437b 383 PANTHER PTHR13693 4 378 2.2E-176 T 22-04-2016 YPO1152 0d8b3798d9e269d2bfb36d2ed7d6437b 383 Gene3D G3DSA:3.40.640.10 57 269 5.4E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1152 0d8b3798d9e269d2bfb36d2ed7d6437b 383 SUPERFAMILY SSF53383 3 378 1.61E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1152 0d8b3798d9e269d2bfb36d2ed7d6437b 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 YPO1152 0d8b3798d9e269d2bfb36d2ed7d6437b 383 Pfam PF00155 Aminotransferase class I and II 40 378 2.5E-60 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO1152 0d8b3798d9e269d2bfb36d2ed7d6437b 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 48.93 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 YPO1152 0d8b3798d9e269d2bfb36d2ed7d6437b 383 PANTHER PTHR13693:SF53 4 378 2.2E-176 T 22-04-2016 YPO1152 0d8b3798d9e269d2bfb36d2ed7d6437b 383 Gene3D G3DSA:3.90.1150.10 270 379 2.7E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1152 0d8b3798d9e269d2bfb36d2ed7d6437b 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 378 1.5E-139 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 YPO2572 666a1d065c93ee22c135b7feb5500fbd 279 Gene3D G3DSA:1.10.3810.10 63 215 3.2E-44 T 22-04-2016 YPO2572 666a1d065c93ee22c135b7feb5500fbd 279 SUPERFAMILY SSF53955 42 264 5.62E-54 T 22-04-2016 IPR023346 Lysozyme-like domain YPO2572 666a1d065c93ee22c135b7feb5500fbd 279 PANTHER PTHR32282 16 241 2.4E-54 T 22-04-2016 YPO2572 666a1d065c93ee22c135b7feb5500fbd 279 PANTHER PTHR32282:SF0 16 241 2.4E-54 T 22-04-2016 YPO2572 666a1d065c93ee22c135b7feb5500fbd 279 Pfam PF00912 Transglycosylase 63 214 8.1E-46 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YPO0963 4eca4d11a1f46a4d8535e9ede800a21a 118 PANTHER PTHR33293 1 117 7.6E-43 T 22-04-2016 YPO0963 4eca4d11a1f46a4d8535e9ede800a21a 118 Pfam PF03400 IS1 transposase 1 116 6.8E-44 T 22-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 YPO0793 132922f228c261db1eb0aad5fc60b846 718 Pfam PF01553 Acyltransferase 24 136 6.4E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPO0793 132922f228c261db1eb0aad5fc60b846 718 Gene3D G3DSA:3.40.50.980 230 377 1.0E-15 T 22-04-2016 YPO0793 132922f228c261db1eb0aad5fc60b846 718 SMART SM00563 30 140 9.4E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPO0793 132922f228c261db1eb0aad5fc60b846 718 SUPERFAMILY SSF56801 205 714 1.57E-96 T 22-04-2016 YPO0793 132922f228c261db1eb0aad5fc60b846 718 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO0793 132922f228c261db1eb0aad5fc60b846 718 Gene3D G3DSA:2.30.38.10 534 609 3.7E-13 T 22-04-2016 YPO0793 132922f228c261db1eb0aad5fc60b846 718 Gene3D G3DSA:3.40.50.980 378 533 5.2E-38 T 22-04-2016 YPO0793 132922f228c261db1eb0aad5fc60b846 718 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 59.842 T 22-04-2016 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 YPO0793 132922f228c261db1eb0aad5fc60b846 718 Gene3D G3DSA:3.30.300.30 617 713 5.5E-8 T 22-04-2016 YPO0793 132922f228c261db1eb0aad5fc60b846 718 PANTHER PTHR24096 124 707 0.0 T 22-04-2016 YPO0793 132922f228c261db1eb0aad5fc60b846 718 Pfam PF00501 AMP-binding enzyme 232 619 1.2E-64 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO0793 132922f228c261db1eb0aad5fc60b846 718 SUPERFAMILY SSF69593 10 164 7.06E-18 T 22-04-2016 YPO0793 132922f228c261db1eb0aad5fc60b846 718 PANTHER PTHR24096:SF177 124 707 0.0 T 22-04-2016 YPO2372 80fd90e18e706b221cbedcec303435e3 370 PANTHER PTHR30605 1 370 3.8E-286 T 22-04-2016 YPO2372 80fd90e18e706b221cbedcec303435e3 370 SUPERFAMILY SSF53067 66 111 8.85E-28 T 22-04-2016 YPO2372 80fd90e18e706b221cbedcec303435e3 370 SUPERFAMILY SSF53067 6 36 8.85E-28 T 22-04-2016 YPO2372 80fd90e18e706b221cbedcec303435e3 370 SUPERFAMILY SSF53067 143 341 8.85E-28 T 22-04-2016 YPO2372 80fd90e18e706b221cbedcec303435e3 370 PANTHER PTHR30605:SF2 1 370 3.8E-286 T 22-04-2016 YPO2372 80fd90e18e706b221cbedcec303435e3 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 366 3.0E-163 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 YPO2372 80fd90e18e706b221cbedcec303435e3 370 Gene3D G3DSA:3.30.420.40 5 196 2.9E-72 T 22-04-2016 YPO2372 80fd90e18e706b221cbedcec303435e3 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.236 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 YPO0724 d23380d8e14f3b540dc2b31d765ef4e9 218 PANTHER PTHR30435 1 195 1.3E-60 T 22-04-2016 YPO0724 d23380d8e14f3b540dc2b31d765ef4e9 218 PANTHER PTHR30435:SF15 1 195 1.3E-60 T 22-04-2016 YPO0724 d23380d8e14f3b540dc2b31d765ef4e9 218 Pfam PF03963 Flagellar hook capping protein - N-terminal region 14 76 2.1E-18 T 22-04-2016 IPR005648 Flagellar hook capping protein YPO0724 d23380d8e14f3b540dc2b31d765ef4e9 218 Pfam PF13860 FlgD Ig-like domain 106 172 1.5E-10 T 22-04-2016 IPR025965 FlgD Ig-like domain YPO0724 d23380d8e14f3b540dc2b31d765ef4e9 218 Pfam PF13861 FlgD Tudor-like domain 85 214 9.3E-12 T 22-04-2016 IPR025963 FlgD Tudor-like domain YPO0146 6421b05056ab692669e7901b7988d91e 313 SUPERFAMILY SSF53067 78 180 3.3E-6 T 22-04-2016 YPO0146 6421b05056ab692669e7901b7988d91e 313 PANTHER PTHR32432:SF3 10 288 8.0E-71 T 22-04-2016 YPO0146 6421b05056ab692669e7901b7988d91e 313 PANTHER PTHR32432 10 288 8.0E-71 T 22-04-2016 YPO0146 6421b05056ab692669e7901b7988d91e 313 Pfam PF11104 Type IV pilus assembly protein PilM; 24 182 1.0E-17 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM YPO1129a 6b05b424b8e00d5f7887592dfade5ffb 338 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 322 2.5E-161 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO1129a 6b05b424b8e00d5f7887592dfade5ffb 338 Gene3D G3DSA:3.20.20.70 9 323 1.1E-146 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1129a 6b05b424b8e00d5f7887592dfade5ffb 338 PIRSF PIRSF001361 1 323 1.7E-148 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO1129a 6b05b424b8e00d5f7887592dfade5ffb 338 SUPERFAMILY SSF51569 7 321 1.57E-124 T 22-04-2016 YPO1129a 6b05b424b8e00d5f7887592dfade5ffb 338 PANTHER PTHR21225:SF7 1 320 9.4E-242 T 22-04-2016 YPO1129a 6b05b424b8e00d5f7887592dfade5ffb 338 Pfam PF00793 DAHP synthetase I family 41 322 8.7E-101 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPO1129a 6b05b424b8e00d5f7887592dfade5ffb 338 PANTHER PTHR21225 1 320 9.4E-242 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO1065 5f7091e68217f528b4814283a1022138 182 PANTHER PTHR38784:SF1 1 182 1.1E-100 T 22-04-2016 YPO1065 5f7091e68217f528b4814283a1022138 182 Gene3D G3DSA:3.10.640.10 1 178 9.4E-81 T 22-04-2016 YPO1065 5f7091e68217f528b4814283a1022138 182 SMART SM01322 1 176 7.4E-117 T 22-04-2016 IPR009822 YaeQ YPO1065 5f7091e68217f528b4814283a1022138 182 PANTHER PTHR38784 1 182 1.1E-100 T 22-04-2016 YPO1065 5f7091e68217f528b4814283a1022138 182 Pfam PF07152 YaeQ protein 1 173 1.5E-74 T 22-04-2016 IPR009822 YaeQ YPO1065 5f7091e68217f528b4814283a1022138 182 SUPERFAMILY SSF52980 2 178 2.68E-70 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPO1065 5f7091e68217f528b4814283a1022138 182 PIRSF PIRSF011484 1 180 1.9E-68 T 22-04-2016 IPR009822 YaeQ YPO1172 35beda32d07c406e63061b73f37dcd6f 266 Gene3D G3DSA:1.20.1250.20 8 190 5.7E-9 T 22-04-2016 YPO1172 35beda32d07c406e63061b73f37dcd6f 266 Pfam PF03825 Nucleoside H+ symporter 1 216 4.9E-80 T 22-04-2016 YPO1172 35beda32d07c406e63061b73f37dcd6f 266 PANTHER PTHR23522 1 215 7.4E-107 T 22-04-2016 YPO1172 35beda32d07c406e63061b73f37dcd6f 266 PANTHER PTHR23522:SF4 1 215 7.4E-107 T 22-04-2016 YPO1172 35beda32d07c406e63061b73f37dcd6f 266 SUPERFAMILY SSF103473 9 216 4.32E-11 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2614 269cd50ff23bf79a9dde19231f016256 246 SUPERFAMILY SSF161098 24 223 1.44E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2614 269cd50ff23bf79a9dde19231f016256 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 237 2.3E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2614 269cd50ff23bf79a9dde19231f016256 246 PANTHER PTHR30085:SF4 1 244 2.7E-157 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 YPO2614 269cd50ff23bf79a9dde19231f016256 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 131 2.0E-14 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO2614 269cd50ff23bf79a9dde19231f016256 246 PANTHER PTHR30085 1 244 2.7E-157 T 22-04-2016 YPO2614 269cd50ff23bf79a9dde19231f016256 246 Gene3D G3DSA:1.10.3720.10 23 237 1.5E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 1.3E-63 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 9.9E-133 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 Gene3D G3DSA:3.40.47.10 15 134 1.1E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 Gene3D G3DSA:3.40.47.10 221 300 1.1E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 PANTHER PTHR18919:SF5 10 436 9.3E-204 T 22-04-2016 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 SUPERFAMILY SSF53901 15 295 5.61E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 PIRSF PIRSF000429 9 436 5.7E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 9.7E-255 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 1.6E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 SUPERFAMILY SSF53901 297 435 5.43E-32 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 PANTHER PTHR18919 10 436 9.3E-204 T 22-04-2016 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 Gene3D G3DSA:3.40.47.10 174 220 1.8E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 Gene3D G3DSA:3.40.47.10 302 436 1.8E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2746 04fd95fc20eaba2ccfb5880686c9dca6 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 69.81 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 3.3E-54 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 5.4E-47 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 Gene3D G3DSA:3.40.50.1370 3 143 5.4E-57 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 83.799 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PANTHER PTHR11405 1 276 4.9E-247 T 22-04-2016 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PANTHER PTHR11405 297 335 4.9E-247 T 22-04-2016 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 SUPERFAMILY SSF53671 1 333 1.83E-100 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 Gene3D G3DSA:3.40.50.1370 144 319 5.3E-73 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 5.4E-135 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 6.8E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 6.8E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 6.8E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 6.8E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PANTHER PTHR11405:SF42 1 276 4.9E-247 T 22-04-2016 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PANTHER PTHR11405:SF42 297 335 4.9E-247 T 22-04-2016 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 1.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 1.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPO3446 a29c6903f63b1965d4ee598b5bc875ea 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 1.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Gene3D G3DSA:2.60.40.920 791 877 5.2E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 PANTHER PTHR39576:SF2 574 869 8.1E-156 T 22-04-2016 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 PANTHER PTHR39576:SF2 60 555 8.1E-156 T 22-04-2016 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 PANTHER PTHR39576 574 869 8.1E-156 T 22-04-2016 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 PANTHER PTHR39576 60 555 8.1E-156 T 22-04-2016 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 SUPERFAMILY SSF49373 461 576 2.88E-10 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Gene3D G3DSA:3.10.100.10 982 1027 1.4E-6 T 22-04-2016 IPR016186 C-type lectin-like YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 SUPERFAMILY SSF49373 889 979 4.32E-24 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 SUPERFAMILY SSF49373 588 679 9.42E-20 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Pfam PF11924 Invasin beta-domain of outer membrane 77 351 8.7E-101 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 PRINTS PR01369 Intimin signature 299 318 2.4E-10 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 PRINTS PR01369 Intimin signature 231 250 2.4E-10 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 PRINTS PR01369 Intimin signature 203 218 2.4E-10 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 PRINTS PR01369 Intimin signature 386 398 2.4E-10 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Pfam PF09134 Invasin, domain 3 461 580 5.3E-18 T 22-04-2016 IPR015217 Invasin, domain 3 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Gene3D G3DSA:2.60.40.920 584 677 1.3E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Gene3D G3DSA:2.60.40.920 462 576 2.5E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Pfam PF02369 Bacterial Ig-like domain (group 1) 697 775 1.9E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Pfam PF02369 Bacterial Ig-like domain (group 1) 585 673 4.2E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Pfam PF02369 Bacterial Ig-like domain (group 1) 791 875 2.6E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 SUPERFAMILY SSF49373 693 781 1.35E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Gene3D G3DSA:2.60.40.1080 902 980 2.6E-25 T 22-04-2016 YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 Gene3D G3DSA:2.60.40.920 689 782 6.3E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 SMART SM00634 691 777 4.8E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 SMART SM00634 783 878 5.0E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 SMART SM00634 582 674 2.0E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 60bb5caae3279668b1bebe2e98ca749e 1050 SUPERFAMILY SSF49373 792 878 5.49E-12 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO1996 1c7e7e34f45d54709f046cda2751cde8 301 SUPERFAMILY SSF48371 201 291 4.41E-6 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 YPO1996 1c7e7e34f45d54709f046cda2751cde8 301 Pfam PF13646 HEAT repeats 222 292 2.3E-9 T 22-04-2016 YPO1996 1c7e7e34f45d54709f046cda2751cde8 301 Gene3D G3DSA:1.25.10.10 204 292 8.3E-7 T 22-04-2016 IPR011989 Armadillo-like helical YPO3711 9ca9ec5122d1d1a771d45ebf09fb6499 423 Gene3D G3DSA:2.40.170.10 25 423 2.8E-165 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPO3711 9ca9ec5122d1d1a771d45ebf09fb6499 423 Pfam PF02264 LamB porin 27 423 6.1E-144 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPO3711 9ca9ec5122d1d1a771d45ebf09fb6499 423 SUPERFAMILY SSF56935 25 423 1.71E-147 T 22-04-2016 YPO3711 9ca9ec5122d1d1a771d45ebf09fb6499 423 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 418 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPO3711 9ca9ec5122d1d1a771d45ebf09fb6499 423 PANTHER PTHR38762 1 423 3.6E-213 T 22-04-2016 YPO3711 9ca9ec5122d1d1a771d45ebf09fb6499 423 Hamap MF_01301 Maltoporin [lamB]. 3 423 42.99 T 22-04-2016 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 YPO1462 6043bd77483a12f9f36a27c2042c5fc6 82 SUPERFAMILY SSF47336 1 78 2.75E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1462 6043bd77483a12f9f36a27c2042c5fc6 82 Pfam PF00550 Phosphopantetheine attachment site 14 74 3.8E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1462 6043bd77483a12f9f36a27c2042c5fc6 82 Gene3D G3DSA:1.10.1200.10 1 75 4.4E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO3392 e490fbe234332cbb1bad0e02693c5818 264 Pfam PF00005 ABC transporter 26 175 2.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3392 e490fbe234332cbb1bad0e02693c5818 264 SMART SM00382 35 223 3.9E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3392 e490fbe234332cbb1bad0e02693c5818 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3392 e490fbe234332cbb1bad0e02693c5818 264 Gene3D G3DSA:3.40.50.300 13 239 2.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3392 e490fbe234332cbb1bad0e02693c5818 264 PANTHER PTHR24220 12 259 1.7E-141 T 22-04-2016 YPO3392 e490fbe234332cbb1bad0e02693c5818 264 PANTHER PTHR24220:SF266 12 259 1.7E-141 T 22-04-2016 YPO3392 e490fbe234332cbb1bad0e02693c5818 264 SUPERFAMILY SSF52540 13 237 3.41E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1652 20940f7e851da2940206dbd176f66a2f 177 Pfam PF10777 Inner membrane protein YlaC 1 154 8.1E-72 T 22-04-2016 IPR019713 Inner membrane protein YlaC YPO1783 aa91e2ee0e3d0f8cf2ec7e9f299e8fbb 169 SUPERFAMILY SSF47240 1 159 1.39E-57 T 22-04-2016 IPR009078 Ferritin-like superfamily YPO1783 aa91e2ee0e3d0f8cf2ec7e9f299e8fbb 169 PANTHER PTHR11431 4 164 3.2E-47 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 YPO1783 aa91e2ee0e3d0f8cf2ec7e9f299e8fbb 169 PANTHER PTHR11431:SF4 4 164 3.2E-47 T 22-04-2016 YPO1783 aa91e2ee0e3d0f8cf2ec7e9f299e8fbb 169 Pfam PF00210 Ferritin-like domain 8 143 4.0E-40 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YPO1783 aa91e2ee0e3d0f8cf2ec7e9f299e8fbb 169 Gene3D G3DSA:1.20.1260.10 1 161 6.4E-61 T 22-04-2016 IPR012347 Ferritin-related YPO3683 3b16cd0c696622e4cec9ea660594c37e 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.3E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3683 3b16cd0c696622e4cec9ea660594c37e 303 SUPERFAMILY SSF53850 90 295 5.58E-40 T 22-04-2016 YPO3683 3b16cd0c696622e4cec9ea660594c37e 303 PANTHER PTHR30126 1 303 3.0E-166 T 22-04-2016 YPO3683 3b16cd0c696622e4cec9ea660594c37e 303 SUPERFAMILY SSF46785 3 109 3.01E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3683 3b16cd0c696622e4cec9ea660594c37e 303 Pfam PF03466 LysR substrate binding domain 89 292 4.9E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YPO3683 3b16cd0c696622e4cec9ea660594c37e 303 PANTHER PTHR30126:SF26 1 303 3.0E-166 T 22-04-2016 YPO3683 3b16cd0c696622e4cec9ea660594c37e 303 Gene3D G3DSA:3.40.190.10 178 260 3.8E-4 T 22-04-2016 YPO3683 3b16cd0c696622e4cec9ea660594c37e 303 Gene3D G3DSA:1.10.10.10 3 87 3.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3683 3b16cd0c696622e4cec9ea660594c37e 303 Gene3D G3DSA:3.40.190.10 92 177 1.4E-20 T 22-04-2016 YPO1039 f9f203d5a2e9ee5cd047839243def9d5 149 SUPERFAMILY SSF52218 1 148 1.9E-39 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO1039 f9f203d5a2e9ee5cd047839243def9d5 149 Gene3D G3DSA:3.40.50.360 1 148 1.1E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO1039 f9f203d5a2e9ee5cd047839243def9d5 149 PANTHER PTHR19384 1 144 9.3E-28 T 22-04-2016 YPO1039 f9f203d5a2e9ee5cd047839243def9d5 149 Pfam PF00258 Flavodoxin 6 136 6.2E-23 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPO1039 f9f203d5a2e9ee5cd047839243def9d5 149 PRINTS PR00369 Flavodoxin signature 84 94 5.3E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO1039 f9f203d5a2e9ee5cd047839243def9d5 149 PRINTS PR00369 Flavodoxin signature 53 64 5.3E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO1039 f9f203d5a2e9ee5cd047839243def9d5 149 PRINTS PR00369 Flavodoxin signature 108 127 5.3E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO1292 2d5310c00c66b669eaabb0efba128601 236 PANTHER PTHR11934 5 234 2.2E-96 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO1292 2d5310c00c66b669eaabb0efba128601 236 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 10 230 3.2E-82 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO1292 2d5310c00c66b669eaabb0efba128601 236 Gene3D G3DSA:3.30.70.260 144 213 6.9E-25 T 22-04-2016 YPO1292 2d5310c00c66b669eaabb0efba128601 236 Gene3D G3DSA:3.40.50.1360 7 143 1.9E-54 T 22-04-2016 YPO1292 2d5310c00c66b669eaabb0efba128601 236 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 5 233 30.125 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO1292 2d5310c00c66b669eaabb0efba128601 236 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 54 229 7.1E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YPO1292 2d5310c00c66b669eaabb0efba128601 236 SUPERFAMILY SSF100950 4 151 5.12E-42 T 22-04-2016 YPO1292 2d5310c00c66b669eaabb0efba128601 236 SUPERFAMILY SSF75445 131 215 1.57E-20 T 22-04-2016 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 Gene3D G3DSA:2.30.130.10 273 365 6.0E-25 T 22-04-2016 IPR015947 PUA-like domain YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 Gene3D G3DSA:3.40.1160.10 4 258 9.6E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 9.4E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 Pfam PF01472 PUA domain 276 350 8.2E-21 T 22-04-2016 IPR002478 PUA domain GO:0003723 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 SUPERFAMILY SSF53633 6 256 3.14E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 Pfam PF00696 Amino acid kinase family 6 234 7.9E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 PIRSF PIRSF000729 1 367 2.8E-141 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 SMART SM00359 276 359 1.7E-21 T 22-04-2016 IPR002478 PUA domain GO:0003723 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 SUPERFAMILY SSF88697 276 366 5.36E-23 T 22-04-2016 IPR015947 PUA-like domain YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 2.5E-151 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 35.796 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPO3222 2bba4a88aae9bf859fc4d706999c715f 367 PANTHER PTHR11063 5 367 4.6E-145 T 22-04-2016 YPO3656 20d27a4004e1aec9ae59c5462d02143e 293 SUPERFAMILY SSF53335 43 287 2.79E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3656 20d27a4004e1aec9ae59c5462d02143e 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 4.2E-100 T 22-04-2016 YPO3656 20d27a4004e1aec9ae59c5462d02143e 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 2.3E-117 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YPO3656 20d27a4004e1aec9ae59c5462d02143e 293 PIRSF PIRSF000401 1 293 7.2E-90 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YPO3656 20d27a4004e1aec9ae59c5462d02143e 293 PANTHER PTHR18895:SF69 9 292 1.4E-175 T 22-04-2016 YPO3656 20d27a4004e1aec9ae59c5462d02143e 293 Gene3D G3DSA:3.40.50.150 98 286 8.4E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3656 20d27a4004e1aec9ae59c5462d02143e 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.471 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YPO3656 20d27a4004e1aec9ae59c5462d02143e 293 PANTHER PTHR18895 9 292 1.4E-175 T 22-04-2016 YPO2924 02f9d9d2f648956e0e9a43f751fdc45c 215 SUPERFAMILY SSF56784 6 198 7.0E-10 T 22-04-2016 IPR023214 HAD-like domain YPO2924 02f9d9d2f648956e0e9a43f751fdc45c 215 Gene3D G3DSA:3.40.50.1000 108 141 8.4E-7 T 22-04-2016 IPR023214 HAD-like domain YPO2924 02f9d9d2f648956e0e9a43f751fdc45c 215 Gene3D G3DSA:3.40.50.1000 9 33 8.4E-7 T 22-04-2016 IPR023214 HAD-like domain YPO2924 02f9d9d2f648956e0e9a43f751fdc45c 215 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 6 215 3.1E-135 T 22-04-2016 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPO2924 02f9d9d2f648956e0e9a43f751fdc45c 215 Pfam PF12710 haloacid dehalogenase-like hydrolase 13 196 8.8E-14 T 22-04-2016 YPO0218 1810ac9ab15ee2565f51d440023e927c 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.0E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0218 1810ac9ab15ee2565f51d440023e927c 63 SUPERFAMILY SSF46561 1 61 1.57E-21 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0218 1810ac9ab15ee2565f51d440023e927c 63 PANTHER PTHR10916 1 63 1.4E-29 T 22-04-2016 YPO0218 1810ac9ab15ee2565f51d440023e927c 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.9E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0218 1810ac9ab15ee2565f51d440023e927c 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0218 1810ac9ab15ee2565f51d440023e927c 63 Gene3D G3DSA:1.10.287.310 1 60 1.7E-27 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0218 1810ac9ab15ee2565f51d440023e927c 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.616 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1969 59fa3cef67d94b6387a99c97a7576afc 250 PANTHER PTHR30050 21 241 2.5E-71 T 22-04-2016 YPO1969 59fa3cef67d94b6387a99c97a7576afc 250 SUPERFAMILY SSF52540 61 245 6.53E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1969 59fa3cef67d94b6387a99c97a7576afc 250 PIRSF PIRSF003073 1 248 2.2E-91 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1969 59fa3cef67d94b6387a99c97a7576afc 250 SMART SM00382 92 226 8.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1969 59fa3cef67d94b6387a99c97a7576afc 250 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 184 198 5.0E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1969 59fa3cef67d94b6387a99c97a7576afc 250 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 96 114 5.0E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YPO1969 59fa3cef67d94b6387a99c97a7576afc 250 Gene3D G3DSA:3.40.50.300 61 225 1.6E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1969 59fa3cef67d94b6387a99c97a7576afc 250 Pfam PF01695 IstB-like ATP binding protein 47 226 6.1E-72 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 Pfam PF07732 Multicopper oxidase 53 166 5.8E-32 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 ProSitePatterns PS00080 Multicopper oxidases signature 2. 514 525 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 Gene3D G3DSA:2.60.40.420 33 172 2.3E-34 T 22-04-2016 IPR008972 Cupredoxin YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 Pfam PF00394 Multicopper oxidase 221 290 1.9E-6 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 PANTHER PTHR11709:SF2 392 531 1.8E-126 T 22-04-2016 YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 PANTHER PTHR11709:SF2 65 340 1.8E-126 T 22-04-2016 YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 Pfam PF07731 Multicopper oxidase 416 532 7.6E-25 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 22 4.7E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 PANTHER PTHR11709 392 531 1.8E-126 T 22-04-2016 YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 PANTHER PTHR11709 65 340 1.8E-126 T 22-04-2016 YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 SUPERFAMILY SSF49503 172 292 9.64E-33 T 22-04-2016 IPR008972 Cupredoxin YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 Gene3D G3DSA:2.60.40.420 173 306 1.2E-31 T 22-04-2016 IPR008972 Cupredoxin YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 Gene3D G3DSA:2.60.40.420 384 531 3.8E-30 T 22-04-2016 IPR008972 Cupredoxin YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 SUPERFAMILY SSF49503 414 531 8.47E-28 T 22-04-2016 IPR008972 Cupredoxin YPO3409 ca66493f3756bc38ab5acdba1da4e187 533 SUPERFAMILY SSF49503 17 169 1.45E-28 T 22-04-2016 IPR008972 Cupredoxin YPO1140 79e6fc2569b65c3f3fdf817041b3441b 272 PANTHER PTHR10794 44 272 1.1E-139 T 22-04-2016 YPO1140 79e6fc2569b65c3f3fdf817041b3441b 272 Pfam PF02517 CAAX protease self-immunity 172 259 2.1E-14 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 YPO1140 79e6fc2569b65c3f3fdf817041b3441b 272 PANTHER PTHR10794:SF54 44 272 1.1E-139 T 22-04-2016 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.1E-115 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 Gene3D G3DSA:3.20.70.20 610 699 7.4E-42 T 22-04-2016 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 Gene3D G3DSA:3.20.70.20 136 344 7.4E-42 T 22-04-2016 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 Gene3D G3DSA:3.20.70.20 398 559 7.4E-42 T 22-04-2016 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 PANTHER PTHR11573 6 754 0.0 T 22-04-2016 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 PANTHER PTHR11573:SF17 6 754 0.0 T 22-04-2016 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 4.7E-178 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 SUPERFAMILY SSF48168 10 221 1.44E-72 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 9.46E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 9.46E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 9.46E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 9.46E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 9.46E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 9.46E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 SUPERFAMILY SSF51998 222 741 5.49E-168 T 22-04-2016 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 3.9E-12 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO1214 71c1a417ed3b7619887c34bf110f9c5c 762 Pfam PF03477 ATP cone domain 6 92 8.2E-16 T 22-04-2016 IPR005144 ATP-cone domain YPO0195 6b0568feadd82f9ded8746f8dcb995e2 266 Gene3D G3DSA:3.10.50.40 133 246 2.0E-44 T 22-04-2016 YPO0195 6b0568feadd82f9ded8746f8dcb995e2 266 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 243 3.6E-29 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPO0195 6b0568feadd82f9ded8746f8dcb995e2 266 Gene3D G3DSA:1.10.287.460 30 132 6.4E-44 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YPO0195 6b0568feadd82f9ded8746f8dcb995e2 266 PANTHER PTHR10516 133 246 6.8E-50 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO0195 6b0568feadd82f9ded8746f8dcb995e2 266 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 30 149 1.2E-38 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YPO0195 6b0568feadd82f9ded8746f8dcb995e2 266 SUPERFAMILY SSF54534 40 246 2.16E-64 T 22-04-2016 YPO3860 86e86091a3d18fa0a2408ad620dc0cb4 222 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 21 221 46.87 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 YPO3860 86e86091a3d18fa0a2408ad620dc0cb4 222 PANTHER PTHR23091 70 215 1.2E-20 T 22-04-2016 YPO3860 86e86091a3d18fa0a2408ad620dc0cb4 222 SUPERFAMILY SSF55729 22 215 2.74E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3860 86e86091a3d18fa0a2408ad620dc0cb4 222 Gene3D G3DSA:3.40.630.30 66 215 1.5E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3860 86e86091a3d18fa0a2408ad620dc0cb4 222 Pfam PF00583 Acetyltransferase (GNAT) family 138 209 9.6E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3860 86e86091a3d18fa0a2408ad620dc0cb4 222 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 21 221 8.9E-110 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 YPO2035 effb0304a693a39126dee1df96b7e26f 276 PANTHER PTHR23344 17 276 1.2E-74 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPO2035 effb0304a693a39126dee1df96b7e26f 276 SUPERFAMILY SSF51695 15 266 9.94E-50 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO2035 effb0304a693a39126dee1df96b7e26f 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 218 7.2E-24 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPO2035 effb0304a693a39126dee1df96b7e26f 276 PANTHER PTHR23344:SF20 17 276 1.2E-74 T 22-04-2016 YPO2035 effb0304a693a39126dee1df96b7e26f 276 Gene3D G3DSA:3.20.20.190 10 270 7.3E-47 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 98 115 4.26E-29 T 22-04-2016 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 7 22 4.26E-29 T 22-04-2016 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 77 86 4.26E-29 T 22-04-2016 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 59 67 4.26E-29 T 22-04-2016 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 PRINTS PR01100 Shikimate kinase family signature 31 44 4.26E-29 T 22-04-2016 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 Pfam PF01202 Shikimate kinase 13 170 8.7E-57 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 PANTHER PTHR21087 1 173 3.4E-73 T 22-04-2016 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 SUPERFAMILY SSF52540 4 170 2.7E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.487 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO0151 72be2aa6396ad0abaa3a71920db8eba5 173 Gene3D G3DSA:3.40.50.300 2 172 5.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1235 9130887f306c1554f68f29977d7a3a02 437 Pfam PF07005 Putative sugar-binding N-terminal domain 8 236 3.7E-65 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain YPO1235 9130887f306c1554f68f29977d7a3a02 437 SUPERFAMILY SSF142764 8 434 5.75E-122 T 22-04-2016 YPO1235 9130887f306c1554f68f29977d7a3a02 437 PANTHER PTHR30304 129 437 1.0E-155 T 22-04-2016 YPO1235 9130887f306c1554f68f29977d7a3a02 437 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 272 429 1.4E-40 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain YPO1235 9130887f306c1554f68f29977d7a3a02 437 PANTHER PTHR30304:SF3 129 437 1.0E-155 T 22-04-2016 YPO1283 2c4effdd0345f936adb3b536d21125b4 397 SUPERFAMILY SSF51658 1 383 2.02E-78 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1283 2c4effdd0345f936adb3b536d21125b4 397 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 397 225.455 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YPO1283 2c4effdd0345f936adb3b536d21125b4 397 PANTHER PTHR30387 1 397 3.4E-185 T 22-04-2016 YPO1283 2c4effdd0345f936adb3b536d21125b4 397 PIRSF PIRSF016049 1 392 6.9E-178 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YPO1283 2c4effdd0345f936adb3b536d21125b4 397 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 2.3E-211 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YPO1283 2c4effdd0345f936adb3b536d21125b4 397 PANTHER PTHR30387:SF2 1 397 3.4E-185 T 22-04-2016 YPO1283 2c4effdd0345f936adb3b536d21125b4 397 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.3E-155 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YPO1283 2c4effdd0345f936adb3b536d21125b4 397 Gene3D G3DSA:3.20.20.150 1 391 9.6E-151 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO0850 2b3f4e75b07bdb999110f9c4e0320b55 419 Pfam PF02264 LamB porin 29 419 4.0E-107 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPO0850 2b3f4e75b07bdb999110f9c4e0320b55 419 Gene3D G3DSA:2.40.170.10 26 419 1.5E-119 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPO0850 2b3f4e75b07bdb999110f9c4e0320b55 419 Hamap MF_01301 Maltoporin [lamB]. 2 419 44.802 T 22-04-2016 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 YPO0850 2b3f4e75b07bdb999110f9c4e0320b55 419 SUPERFAMILY SSF56935 27 419 1.65E-109 T 22-04-2016 YPO0850 2b3f4e75b07bdb999110f9c4e0320b55 419 PANTHER PTHR38762 1 419 2.7E-204 T 22-04-2016 YPO0850 2b3f4e75b07bdb999110f9c4e0320b55 419 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 34 414 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YPO3636 d4d6100715562fe8f367bc4d9e45731b 317 PANTHER PTHR32196 1 316 4.8E-177 T 22-04-2016 YPO3636 d4d6100715562fe8f367bc4d9e45731b 317 PANTHER PTHR32196:SF39 1 316 4.8E-177 T 22-04-2016 YPO3636 d4d6100715562fe8f367bc4d9e45731b 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 309 2.7E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 SUPERFAMILY SSF51569 2 291 1.36E-98 T 22-04-2016 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 PANTHER PTHR12128:SF34 1 293 1.9E-147 T 22-04-2016 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 SMART SM01130 1 291 5.2E-144 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 PIRSF PIRSF001365 1 293 1.8E-94 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.4E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.4E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.4E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.4E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 Gene3D G3DSA:3.20.20.70 1 293 2.0E-115 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 64.855 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 7.9E-119 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 PANTHER PTHR12128 1 293 1.9E-147 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 1.1E-113 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YPO3062 9206989b2eb5d44e71f6809b068b5cce 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO2174 709ea341598949e29df19ae3630def04 448 Gene3D G3DSA:1.20.5.100 209 235 4.3E-18 T 22-04-2016 YPO2174 709ea341598949e29df19ae3630def04 448 Gene3D G3DSA:3.40.50.720 237 444 1.2E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2174 709ea341598949e29df19ae3630def04 448 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 422 1.4E-136 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPO2174 709ea341598949e29df19ae3630def04 448 SUPERFAMILY SSF52413 312 437 3.27E-40 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPO2174 709ea341598949e29df19ae3630def04 448 SMART SM00984 322 426 1.0E-52 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPO2174 709ea341598949e29df19ae3630def04 448 PIRSF PIRSF500134 1 444 3.4E-187 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 YPO2174 709ea341598949e29df19ae3630def04 448 Gene3D G3DSA:3.40.50.720 1 208 1.0E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2174 709ea341598949e29df19ae3630def04 448 PANTHER PTHR11374 1 446 7.0E-261 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPO2174 709ea341598949e29df19ae3630def04 448 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 298 2.5E-38 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 YPO2174 709ea341598949e29df19ae3630def04 448 PANTHER PTHR11374:SF18 1 446 7.0E-261 T 22-04-2016 YPO2174 709ea341598949e29df19ae3630def04 448 SUPERFAMILY SSF48179 205 302 1.43E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO2174 709ea341598949e29df19ae3630def04 448 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 3.1E-63 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 YPO2174 709ea341598949e29df19ae3630def04 448 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 426 1.2E-31 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YPO2174 709ea341598949e29df19ae3630def04 448 SUPERFAMILY SSF51735 1 197 5.26E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2174 709ea341598949e29df19ae3630def04 448 PIRSF PIRSF000124 1 441 2.7E-146 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YPO3548 8565dcab5246936de33bedd13f3480ad 657 PANTHER PTHR38038 1 657 4.4E-227 T 22-04-2016 YPO3548 8565dcab5246936de33bedd13f3480ad 657 PANTHER PTHR38038:SF1 1 657 4.4E-227 T 22-04-2016 YPO3548 8565dcab5246936de33bedd13f3480ad 657 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 651 37.355 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA YPO3548 8565dcab5246936de33bedd13f3480ad 657 Gene3D G3DSA:3.40.50.2300 329 399 1.1E-71 T 22-04-2016 YPO3548 8565dcab5246936de33bedd13f3480ad 657 Gene3D G3DSA:3.40.50.2300 256 286 1.1E-71 T 22-04-2016 YPO3548 8565dcab5246936de33bedd13f3480ad 657 Gene3D G3DSA:3.40.50.2300 581 644 1.1E-71 T 22-04-2016 YPO3548 8565dcab5246936de33bedd13f3480ad 657 Pfam PF04348 LppC putative lipoprotein 329 651 2.7E-91 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA YPO3548 8565dcab5246936de33bedd13f3480ad 657 Pfam PF04348 LppC putative lipoprotein 40 286 2.4E-53 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA YPO3548 8565dcab5246936de33bedd13f3480ad 657 SUPERFAMILY SSF53822 258 286 2.53E-79 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO3548 8565dcab5246936de33bedd13f3480ad 657 SUPERFAMILY SSF53822 329 656 2.53E-79 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO3548 8565dcab5246936de33bedd13f3480ad 657 Gene3D G3DSA:3.40.50.2300 504 580 3.5E-57 T 22-04-2016 YPO3548 8565dcab5246936de33bedd13f3480ad 657 Gene3D G3DSA:3.40.50.2300 400 460 3.5E-57 T 22-04-2016 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 SUPERFAMILY SSF51621 249 549 1.94E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 9.1E-126 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 4.0E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.52E-31 T 22-04-2016 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.52E-31 T 22-04-2016 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.52E-31 T 22-04-2016 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.52E-31 T 22-04-2016 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Gene3D G3DSA:3.20.20.60 256 571 1.8E-116 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PANTHER PTHR22931 66 550 1.1E-220 T 22-04-2016 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Gene3D G3DSA:3.50.30.10 133 255 7.8E-41 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 SUPERFAMILY SSF47831 23 143 1.96E-34 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 SUPERFAMILY SSF52009 125 246 8.24E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Gene3D G3DSA:1.10.274.10 23 132 2.6E-39 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 1.5E-260 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.2E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YPO2994 91c8efd0fa36d662f0d977bcb0ecf9b1 575 PIRSF PIRSF000732 1 574 6.1E-219 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 YPO0359 52d71e950d3f2b92764c013c05131342 244 PANTHER PTHR11921 3 239 2.7E-102 T 22-04-2016 YPO0359 52d71e950d3f2b92764c013c05131342 244 SUPERFAMILY SSF46548 107 229 7.32E-32 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPO0359 52d71e950d3f2b92764c013c05131342 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 8.8E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0359 52d71e950d3f2b92764c013c05131342 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YPO0359 52d71e950d3f2b92764c013c05131342 244 Gene3D G3DSA:3.10.20.30 3 106 2.4E-34 T 22-04-2016 IPR012675 Beta-grasp domain YPO0359 52d71e950d3f2b92764c013c05131342 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 3.0E-33 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPO0359 52d71e950d3f2b92764c013c05131342 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0359 52d71e950d3f2b92764c013c05131342 244 SUPERFAMILY SSF54292 4 106 7.01E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO0359 52d71e950d3f2b92764c013c05131342 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 3.2E-97 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPO0359 52d71e950d3f2b92764c013c05131342 244 Gene3D G3DSA:1.10.1060.10 107 230 7.9E-37 T 22-04-2016 YPO3589 b303b0bb793528c6a83834a567295a23 154 SUPERFAMILY SSF54893 2 100 1.02E-34 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPO3589 b303b0bb793528c6a83834a567295a23 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.35 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 YPO3589 b303b0bb793528c6a83834a567295a23 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 8.7E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPO3589 b303b0bb793528c6a83834a567295a23 154 PANTHER PTHR35805 2 154 2.6E-78 T 22-04-2016 YPO3589 b303b0bb793528c6a83834a567295a23 154 SUPERFAMILY SSF57825 102 149 1.44E-14 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPO3589 b303b0bb793528c6a83834a567295a23 154 Gene3D G3DSA:3.30.70.140 2 98 7.2E-37 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPO3589 b303b0bb793528c6a83834a567295a23 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 6 150 2.5E-64 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 YPO3589 b303b0bb793528c6a83834a567295a23 154 Gene3D G3DSA:2.30.30.20 101 151 1.2E-22 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPO3589 b303b0bb793528c6a83834a567295a23 154 PANTHER PTHR35805:SF1 2 154 2.6E-78 T 22-04-2016 YPO3589 b303b0bb793528c6a83834a567295a23 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 147 1.2E-18 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPO3589 b303b0bb793528c6a83834a567295a23 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-47 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPO1573 393071ca3604d9125648ae88f990c364 302 Gene3D G3DSA:3.20.20.370 12 300 1.0E-83 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO1573 393071ca3604d9125648ae88f990c364 302 PANTHER PTHR10587:SF74 1 298 1.3E-125 T 22-04-2016 YPO1573 393071ca3604d9125648ae88f990c364 302 SUPERFAMILY SSF88713 16 300 4.45E-61 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO1573 393071ca3604d9125648ae88f990c364 302 PANTHER PTHR10587 1 298 1.3E-125 T 22-04-2016 YPO1573 393071ca3604d9125648ae88f990c364 302 Pfam PF01522 Polysaccharide deacetylase 50 154 7.3E-20 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO0847 09eba105bb8de10c9ab9207bebd92de2 435 PANTHER PTHR11662 14 433 5.8E-279 T 22-04-2016 YPO0847 09eba105bb8de10c9ab9207bebd92de2 435 Gene3D G3DSA:1.20.1250.20 237 430 3.1E-22 T 22-04-2016 YPO0847 09eba105bb8de10c9ab9207bebd92de2 435 Gene3D G3DSA:1.20.1250.20 19 211 1.0E-44 T 22-04-2016 YPO0847 09eba105bb8de10c9ab9207bebd92de2 435 Pfam PF07690 Major Facilitator Superfamily 29 389 8.7E-53 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO0847 09eba105bb8de10c9ab9207bebd92de2 435 SUPERFAMILY SSF103473 14 431 9.55E-80 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0847 09eba105bb8de10c9ab9207bebd92de2 435 PANTHER PTHR11662:SF285 14 433 5.8E-279 T 22-04-2016 YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1297 1372 4.1E-25 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 PRINTS PR00394 RHS protein signature 1317 1337 3.9E-14 T 22-04-2016 IPR001826 RHS protein YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 PRINTS PR00394 RHS protein signature 1340 1359 3.9E-14 T 22-04-2016 IPR001826 RHS protein YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 PRINTS PR00394 RHS protein signature 1263 1283 3.9E-14 T 22-04-2016 IPR001826 RHS protein YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 PANTHER PTHR32305:SF6 111 1002 0.0 T 22-04-2016 YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 PANTHER PTHR32305:SF6 1105 1436 0.0 T 22-04-2016 YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 Pfam PF03527 RHS protein 1269 1302 8.1E-11 T 22-04-2016 IPR001826 RHS protein YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 PANTHER PTHR32305 111 1002 0.0 T 22-04-2016 YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 PANTHER PTHR32305 1105 1436 0.0 T 22-04-2016 YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 773 813 2.5E-9 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 689 729 1.4E-10 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 495 535 3.4E-8 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 735 771 0.0014 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 815 855 1.6E-10 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 857 894 4.2E-8 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1134 1170 6.5E-8 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1064 1089 0.0022 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 605 646 3.7E-11 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 647 688 1.8E-10 T 22-04-2016 IPR006530 YD repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 Pfam PF05593 RHS Repeat 837 872 7.4E-5 T 22-04-2016 IPR031325 RHS repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 Pfam PF05593 RHS Repeat 689 725 1.3E-6 T 22-04-2016 IPR031325 RHS repeat YPO0762 92ed4f1e39df7055bd9591bf0506d99f 1438 Pfam PF05593 RHS Repeat 1043 1079 9.6E-6 T 22-04-2016 IPR031325 RHS repeat YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 162 616 55.866 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557:SF1 155 185 0.0 T 22-04-2016 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557:SF1 646 668 0.0 T 22-04-2016 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557:SF1 5 121 0.0 T 22-04-2016 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557:SF1 213 626 0.0 T 22-04-2016 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557 155 185 0.0 T 22-04-2016 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557 646 668 0.0 T 22-04-2016 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557 5 121 0.0 T 22-04-2016 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 PANTHER PTHR30557 213 626 0.0 T 22-04-2016 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 Pfam PF01964 Radical SAM ThiC family 163 611 2.3E-199 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 Pfam PF13667 ThiC-associated domain 42 123 4.0E-34 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YPO3739 8935d167ccd975e3cc251741d0b1ac0a 681 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 162 614 9.8E-223 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 Gene3D G3DSA:1.10.3860.10 3 416 1.3E-130 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 5.3E-118 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PANTHER PTHR11958 1 427 1.1E-246 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 SUPERFAMILY SSF118215 8 412 7.32E-124 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 2.2E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YPO0254 02d4fd90178e1982ce33abf8b52d2dbf 438 PANTHER PTHR11958:SF26 1 427 1.1E-246 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 YPO3757 7300919bff9f6778d76714c01487cb49 183 Gene3D G3DSA:3.40.630.30 26 171 3.9E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3757 7300919bff9f6778d76714c01487cb49 183 SUPERFAMILY SSF55729 2 171 1.1E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3757 7300919bff9f6778d76714c01487cb49 183 PANTHER PTHR13947 62 178 3.7E-15 T 22-04-2016 YPO3757 7300919bff9f6778d76714c01487cb49 183 Pfam PF13673 Acetyltransferase (GNAT) domain 49 149 1.7E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3391 8186aaa73581dd935815de1ee9c70516 362 Gene3D G3DSA:3.40.50.1980 99 186 9.8E-32 T 22-04-2016 YPO3391 8186aaa73581dd935815de1ee9c70516 362 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 120 138 6.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPO3391 8186aaa73581dd935815de1ee9c70516 362 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 151 166 6.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPO3391 8186aaa73581dd935815de1ee9c70516 362 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 274 292 6.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPO3391 8186aaa73581dd935815de1ee9c70516 362 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 250 265 6.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPO3391 8186aaa73581dd935815de1ee9c70516 362 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 302 319 6.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPO3391 8186aaa73581dd935815de1ee9c70516 362 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 339 352 6.8E-47 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YPO3391 8186aaa73581dd935815de1ee9c70516 362 Pfam PF01497 Periplasmic binding protein 103 337 5.2E-43 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPO3391 8186aaa73581dd935815de1ee9c70516 362 SUPERFAMILY SSF53807 100 356 3.61E-54 T 22-04-2016 YPO3391 8186aaa73581dd935815de1ee9c70516 362 PANTHER PTHR30532:SF1 76 360 5.1E-80 T 22-04-2016 YPO3391 8186aaa73581dd935815de1ee9c70516 362 Gene3D G3DSA:3.40.50.1980 193 357 3.3E-52 T 22-04-2016 YPO3391 8186aaa73581dd935815de1ee9c70516 362 PANTHER PTHR30532 76 360 5.1E-80 T 22-04-2016 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.2E-53 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 Gene3D G3DSA:1.10.1900.20 55 117 2.3E-31 T 22-04-2016 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 SUPERFAMILY SSF74731 3 117 1.83E-50 T 22-04-2016 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 PANTHER PTHR10986:SF12 2 117 6.3E-68 T 22-04-2016 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 22-04-2016 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 Pfam PF00453 Ribosomal protein L20 3 109 3.8E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.175 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPO2430 1f408ec68b6a84a9184df911d1597b81 118 PANTHER PTHR10986 2 117 6.3E-68 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YPO1501 2e0a2e0d4e57fe3ae73b5369e6015e9e 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 4.2E-119 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 YPO1501 2e0a2e0d4e57fe3ae73b5369e6015e9e 280 PANTHER PTHR10061 4 280 3.7E-177 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 YPO1501 2e0a2e0d4e57fe3ae73b5369e6015e9e 280 Gene3D G3DSA:3.40.50.1820 5 279 7.3E-76 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1501 2e0a2e0d4e57fe3ae73b5369e6015e9e 280 SUPERFAMILY SSF53474 5 278 1.26E-87 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1501 2e0a2e0d4e57fe3ae73b5369e6015e9e 280 Pfam PF00756 Putative esterase 26 261 8.0E-69 T 22-04-2016 IPR000801 Putative esterase YPO1088 bbd501b2f416575264f8ed276e9ca394 106 Gene3D G3DSA:1.10.260.40 58 101 6.5E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO1088 bbd501b2f416575264f8ed276e9ca394 106 PANTHER PTHR40275:SF1 5 106 1.3E-40 T 22-04-2016 YPO1088 bbd501b2f416575264f8ed276e9ca394 106 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 19 98 1.1E-16 T 22-04-2016 IPR014057 Addiction module antidote protein, HI1420 YPO1088 bbd501b2f416575264f8ed276e9ca394 106 PANTHER PTHR40275 5 106 1.3E-40 T 22-04-2016 YPO1088 bbd501b2f416575264f8ed276e9ca394 106 SUPERFAMILY SSF47413 42 102 7.17E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0433 c8b77937b73c80a5511d90e80429e032 423 SUPERFAMILY SSF52151 23 275 2.2E-44 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPO0433 c8b77937b73c80a5511d90e80429e032 423 Gene3D G3DSA:3.40.1090.10 25 66 3.7E-4 T 22-04-2016 YPO0433 c8b77937b73c80a5511d90e80429e032 423 Pfam PF01734 Patatin-like phospholipase 28 196 1.8E-20 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 YPO0433 c8b77937b73c80a5511d90e80429e032 423 PANTHER PTHR14226 1 414 9.6E-220 T 22-04-2016 YPO0433 c8b77937b73c80a5511d90e80429e032 423 PANTHER PTHR14226:SF25 1 414 9.6E-220 T 22-04-2016 YPO3576 6648d6fb917f2e7e1522a3d21e929031 324 PANTHER PTHR10846 1 317 2.7E-87 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 YPO3576 6648d6fb917f2e7e1522a3d21e929031 324 Pfam PF01699 Sodium/calcium exchanger protein 175 317 5.2E-27 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YPO3576 6648d6fb917f2e7e1522a3d21e929031 324 Pfam PF01699 Sodium/calcium exchanger protein 5 144 1.3E-29 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YPO3576 6648d6fb917f2e7e1522a3d21e929031 324 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 9.6E-89 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 YPO3673 3eb66830aa62e6d364137423c9aff4cb 952 Gene3D G3DSA:3.90.190.10 798 948 1.7E-19 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPO3673 3eb66830aa62e6d364137423c9aff4cb 952 PANTHER PTHR11219:SF45 18 710 0.0 T 22-04-2016 YPO3673 3eb66830aa62e6d364137423c9aff4cb 952 SUPERFAMILY SSF52799 836 908 2.4E-7 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YPO3673 3eb66830aa62e6d364137423c9aff4cb 952 PANTHER PTHR11219 18 710 0.0 T 22-04-2016 YPO3673 3eb66830aa62e6d364137423c9aff4cb 952 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 859 869 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 YPO3673 3eb66830aa62e6d364137423c9aff4cb 952 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 589 669 1.8E-27 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPO3673 3eb66830aa62e6d364137423c9aff4cb 952 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 221 249 3.0E-4 T 22-04-2016 IPR006530 YD repeat YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 311 3.5E-23 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 Gene3D G3DSA:3.40.50.2300 174 326 2.8E-38 T 22-04-2016 YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 PANTHER PTHR30146 4 330 2.6E-236 T 22-04-2016 YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 4.6E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 SUPERFAMILY SSF53822 62 317 3.81E-51 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 Gene3D G3DSA:1.10.260.40 4 52 1.3E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 SMART SM00354 5 75 6.0E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 Gene3D G3DSA:3.40.50.2300 62 173 9.5E-33 T 22-04-2016 YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 SUPERFAMILY SSF47413 4 53 7.31E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2537 b49a532f865cb1655ca9fb0b0136bb04 330 PANTHER PTHR30146:SF37 4 330 2.6E-236 T 22-04-2016 YPO0841 e79d8faf251553aadd165e551008790f 408 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 281 370 3.0E-19 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain YPO0841 e79d8faf251553aadd165e551008790f 408 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 12 389 1.2E-161 T 22-04-2016 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 YPO0841 e79d8faf251553aadd165e551008790f 408 PANTHER PTHR11228:SF24 13 219 2.5E-252 T 22-04-2016 YPO0841 e79d8faf251553aadd165e551008790f 408 PANTHER PTHR11228:SF24 238 380 2.5E-252 T 22-04-2016 YPO0841 e79d8faf251553aadd165e551008790f 408 Gene3D G3DSA:3.20.20.70 19 356 5.7E-40 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0841 e79d8faf251553aadd165e551008790f 408 SUPERFAMILY SSF102114 18 351 1.23E-37 T 22-04-2016 YPO0841 e79d8faf251553aadd165e551008790f 408 Pfam PF13186 Iron-sulfur cluster-binding domain 282 342 9.0E-8 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain YPO0841 e79d8faf251553aadd165e551008790f 408 PANTHER PTHR11228 13 219 2.5E-252 T 22-04-2016 YPO0841 e79d8faf251553aadd165e551008790f 408 PANTHER PTHR11228 238 380 2.5E-252 T 22-04-2016 YPO0841 e79d8faf251553aadd165e551008790f 408 Pfam PF04055 Radical SAM superfamily 19 188 2.1E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO0841 e79d8faf251553aadd165e551008790f 408 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 173 404 3.0E-15 T 22-04-2016 YPO3447 d32e8c335cbcaa0909c41e775bef9634 152 Pfam PF04074 Domain of unknown function (DUF386) 1 149 7.0E-45 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPO3447 d32e8c335cbcaa0909c41e775bef9634 152 SUPERFAMILY SSF51197 1 151 2.0E-44 T 22-04-2016 YPO3447 d32e8c335cbcaa0909c41e775bef9634 152 PANTHER PTHR34986:SF1 2 152 4.2E-82 T 22-04-2016 YPO3447 d32e8c335cbcaa0909c41e775bef9634 152 Gene3D G3DSA:2.60.120.370 1 151 1.4E-50 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPO3447 d32e8c335cbcaa0909c41e775bef9634 152 PANTHER PTHR34986 2 152 4.2E-82 T 22-04-2016 YPO3447 d32e8c335cbcaa0909c41e775bef9634 152 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 4.8E-52 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPO0649 3a9c20c2037a024d43491e91375dc7a9 272 PANTHER PTHR30622 3 272 2.6E-149 T 22-04-2016 YPO0649 3a9c20c2037a024d43491e91375dc7a9 272 Pfam PF02673 Bacitracin resistance protein BacA 10 266 2.2E-80 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YPO0649 3a9c20c2037a024d43491e91375dc7a9 272 PANTHER PTHR30622:SF3 3 272 2.6E-149 T 22-04-2016 YPO0649 3a9c20c2037a024d43491e91375dc7a9 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 264 6.6E-99 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YPO0649 3a9c20c2037a024d43491e91375dc7a9 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 271 18.356 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 PANTHER PTHR22855 1 317 2.2E-142 T 22-04-2016 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 SUPERFAMILY SSF52096 5 318 4.98E-105 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 7.4E-64 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 Gene3D G3DSA:3.90.226.10 58 281 1.2E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.5E-171 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO1060 fb10a07c09c06985ba1994be1ca44e6a 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 51.026 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO0050 698270ae59188f8d755aff7ecd13ae45 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.332 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0050 698270ae59188f8d755aff7ecd13ae45 78 PANTHER PTHR13528 1 74 4.8E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 YPO0050 698270ae59188f8d755aff7ecd13ae45 78 SUPERFAMILY SSF143800 1 77 2.94E-30 T 22-04-2016 YPO0050 698270ae59188f8d755aff7ecd13ae45 78 Pfam PF00830 Ribosomal L28 family 3 62 5.5E-26 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 YPO0050 698270ae59188f8d755aff7ecd13ae45 78 Gene3D G3DSA:2.30.170.40 2 77 6.0E-36 T 22-04-2016 YPO0050 698270ae59188f8d755aff7ecd13ae45 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 4.1E-29 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO2857 02f97ff8f368e0d772844b03d1b20982 154 Gene3D G3DSA:3.40.1420.10 29 154 9.5E-57 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YPO2857 02f97ff8f368e0d772844b03d1b20982 154 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 37 152 8.3E-50 T 22-04-2016 YPO2857 02f97ff8f368e0d772844b03d1b20982 154 SUPERFAMILY SSF89872 28 153 2.22E-51 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YPO2857 02f97ff8f368e0d772844b03d1b20982 154 PIRSF PIRSF009103 1 154 5.2E-67 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YPO4040 5417c2b2f11fa533de6a20c7bab46e35 328 SUPERFAMILY SSF49401 203 327 4.57E-11 T 22-04-2016 IPR008966 Adhesion domain YPO4040 5417c2b2f11fa533de6a20c7bab46e35 328 Gene3D G3DSA:2.60.40.1090 205 327 2.7E-7 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO4040 5417c2b2f11fa533de6a20c7bab46e35 328 Pfam PF00419 Fimbrial protein 194 327 1.4E-10 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO1457 efacffae32df6accc988a0b4cd4cb833 412 SUPERFAMILY SSF53901 4 170 5.21E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1457 efacffae32df6accc988a0b4cd4cb833 412 PANTHER PTHR11877 4 411 3.1E-101 T 22-04-2016 YPO1457 efacffae32df6accc988a0b4cd4cb833 412 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 267 408 1.0E-15 T 22-04-2016 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00058 YPO1457 efacffae32df6accc988a0b4cd4cb833 412 SUPERFAMILY SSF53901 174 411 4.4E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1457 efacffae32df6accc988a0b4cd4cb833 412 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 3 168 1.8E-7 T 22-04-2016 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: REACT_22258 YPO1457 efacffae32df6accc988a0b4cd4cb833 412 Gene3D G3DSA:3.40.47.10 3 255 1.4E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1457 efacffae32df6accc988a0b4cd4cb833 412 PANTHER PTHR11877:SF26 4 411 3.1E-101 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 YPO0161 100c02e497212e0353cca26db71887f1 848 SUPERFAMILY SSF56014 632 808 1.3E-44 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 PANTHER PTHR11493 2 256 0.0 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 PANTHER PTHR11493 418 833 0.0 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 SUPERFAMILY SSF55124 501 626 9.6E-32 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO0161 100c02e497212e0353cca26db71887f1 848 SUPERFAMILY SSF51905 2 310 9.61E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0161 100c02e497212e0353cca26db71887f1 848 PANTHER PTHR11493:SF52 2 256 0.0 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 PANTHER PTHR11493:SF52 418 833 0.0 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 755 1.1E-14 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO0161 100c02e497212e0353cca26db71887f1 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO0161 100c02e497212e0353cca26db71887f1 848 Gene3D G3DSA:3.50.50.60 106 309 3.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0161 100c02e497212e0353cca26db71887f1 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 620 4.5E-11 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.1E-13 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.1E-13 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.1E-13 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.1E-13 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 288 8.7E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 6.6E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 6.6E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO0161 100c02e497212e0353cca26db71887f1 848 PIRSF PIRSF037149 1 834 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 YPO0161 100c02e497212e0353cca26db71887f1 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 4.2E-15 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain YPO0161 100c02e497212e0353cca26db71887f1 848 Gene3D G3DSA:3.50.50.60 3 105 1.3E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 6.4E-11 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 6.4E-11 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 6.4E-11 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 6.4E-11 T 22-04-2016 YPO0161 100c02e497212e0353cca26db71887f1 848 Gene3D G3DSA:3.90.480.10 561 628 6.4E-10 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO0161 100c02e497212e0353cca26db71887f1 848 Gene3D G3DSA:3.30.413.10 633 760 7.1E-30 T 22-04-2016 YPO2329 de2b91b694d23e9a13a81a087e217b42 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 328 2.6E-32 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPO2329 de2b91b694d23e9a13a81a087e217b42 330 SUPERFAMILY SSF52283 2 135 2.46E-44 T 22-04-2016 YPO2329 de2b91b694d23e9a13a81a087e217b42 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO2329 de2b91b694d23e9a13a81a087e217b42 330 Gene3D G3DSA:3.40.50.720 138 305 8.4E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2329 de2b91b694d23e9a13a81a087e217b42 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO2329 de2b91b694d23e9a13a81a087e217b42 330 PANTHER PTHR10996:SF161 1 328 7.5E-176 T 22-04-2016 YPO2329 de2b91b694d23e9a13a81a087e217b42 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO2329 de2b91b694d23e9a13a81a087e217b42 330 SUPERFAMILY SSF51735 102 298 1.29E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2329 de2b91b694d23e9a13a81a087e217b42 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.0E-53 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPO2329 de2b91b694d23e9a13a81a087e217b42 330 PANTHER PTHR10996 1 328 7.5E-176 T 22-04-2016 YPO2329 de2b91b694d23e9a13a81a087e217b42 330 Gene3D G3DSA:3.40.50.720 1 137 2.2E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2196 7a59cf57c1a553702523c5e5c7e4156d 180 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.59 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 YPO2196 7a59cf57c1a553702523c5e5c7e4156d 180 PANTHER PTHR36917:SF1 1 180 3.7E-85 T 22-04-2016 YPO2196 7a59cf57c1a553702523c5e5c7e4156d 180 Pfam PF04279 Intracellular septation protein A 1 175 1.8E-71 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 YPO2196 7a59cf57c1a553702523c5e5c7e4156d 180 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 1.9E-71 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 YPO2196 7a59cf57c1a553702523c5e5c7e4156d 180 PANTHER PTHR36917 1 180 3.7E-85 T 22-04-2016 YPO3147 8ea7203f0bf97a9feeda5ba653de1696 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 314 4.8E-45 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3147 8ea7203f0bf97a9feeda5ba653de1696 346 PANTHER PTHR10314 1 345 2.4E-209 T 22-04-2016 YPO3147 8ea7203f0bf97a9feeda5ba653de1696 346 PANTHER PTHR10314:SF126 1 345 2.4E-209 T 22-04-2016 YPO3147 8ea7203f0bf97a9feeda5ba653de1696 346 SUPERFAMILY SSF53686 21 334 3.67E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3147 8ea7203f0bf97a9feeda5ba653de1696 346 Gene3D G3DSA:3.40.50.1100 141 331 1.8E-40 T 22-04-2016 YPO3147 8ea7203f0bf97a9feeda5ba653de1696 346 Gene3D G3DSA:3.40.50.1100 46 140 8.4E-22 T 22-04-2016 YPO3606 b5f920b0bedf680d38dd52abd931084b 800 Gene3D G3DSA:3.55.50.10 262 354 2.7E-35 T 22-04-2016 YPO3606 b5f920b0bedf680d38dd52abd931084b 800 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 186 665 7.8E-192 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO3606 b5f920b0bedf680d38dd52abd931084b 800 SUPERFAMILY SSF69279 174 349 2.81E-56 T 22-04-2016 YPO3606 b5f920b0bedf680d38dd52abd931084b 800 Gene3D G3DSA:2.40.50.230 532 613 6.1E-41 T 22-04-2016 IPR006531 Gp5 N-terminal YPO3606 b5f920b0bedf680d38dd52abd931084b 800 PANTHER PTHR32305:SF11 1 784 0.0 T 22-04-2016 YPO3606 b5f920b0bedf680d38dd52abd931084b 800 SUPERFAMILY SSF69279 353 527 9.35E-42 T 22-04-2016 YPO3606 b5f920b0bedf680d38dd52abd931084b 800 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 173 682 6.9E-202 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO3606 b5f920b0bedf680d38dd52abd931084b 800 SUPERFAMILY SSF69349 604 792 1.57E-41 T 22-04-2016 YPO3606 b5f920b0bedf680d38dd52abd931084b 800 SUPERFAMILY SSF69255 526 613 6.8E-34 T 22-04-2016 YPO3606 b5f920b0bedf680d38dd52abd931084b 800 Pfam PF05954 Phage late control gene D protein (GPD) 194 491 9.1E-83 T 22-04-2016 YPO3606 b5f920b0bedf680d38dd52abd931084b 800 PANTHER PTHR32305 1 784 0.0 T 22-04-2016 YPO3427 31305419ed15083f48e5538189c5b4fa 399 PANTHER PTHR30012 5 399 6.6E-168 T 22-04-2016 YPO3427 31305419ed15083f48e5538189c5b4fa 399 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 YPO3427 31305419ed15083f48e5538189c5b4fa 399 PANTHER PTHR30012:SF0 5 399 6.6E-168 T 22-04-2016 YPO3427 31305419ed15083f48e5538189c5b4fa 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 9.6E-19 T 22-04-2016 IPR003004 GspF/PilC family YPO3427 31305419ed15083f48e5538189c5b4fa 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 9.6E-19 T 22-04-2016 IPR003004 GspF/PilC family YPO3427 31305419ed15083f48e5538189c5b4fa 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 9.6E-19 T 22-04-2016 IPR003004 GspF/PilC family YPO3427 31305419ed15083f48e5538189c5b4fa 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 9.6E-19 T 22-04-2016 IPR003004 GspF/PilC family YPO3427 31305419ed15083f48e5538189c5b4fa 399 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 2.6E-26 T 22-04-2016 IPR018076 Type II secretion system F domain YPO3427 31305419ed15083f48e5538189c5b4fa 399 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 1.4E-29 T 22-04-2016 IPR018076 Type II secretion system F domain YPO2525 a5a28a09bcf7beb86a496eedcf1ae600 285 Gene3D G3DSA:1.10.12.10 223 273 3.9E-31 T 22-04-2016 IPR014748 Crontonase, C-terminal YPO2525 a5a28a09bcf7beb86a496eedcf1ae600 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.611 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO2525 a5a28a09bcf7beb86a496eedcf1ae600 285 PANTHER PTHR11941:SF20 9 278 2.9E-197 T 22-04-2016 YPO2525 a5a28a09bcf7beb86a496eedcf1ae600 285 PANTHER PTHR11941 9 278 2.9E-197 T 22-04-2016 YPO2525 a5a28a09bcf7beb86a496eedcf1ae600 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 YPO2525 a5a28a09bcf7beb86a496eedcf1ae600 285 SUPERFAMILY SSF52096 19 280 9.68E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2525 a5a28a09bcf7beb86a496eedcf1ae600 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 8.4E-80 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPO2525 a5a28a09bcf7beb86a496eedcf1ae600 285 Gene3D G3DSA:3.90.226.10 22 222 6.6E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2525 a5a28a09bcf7beb86a496eedcf1ae600 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 4.2E-151 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 Gene3D G3DSA:3.40.225.10 31 231 5.0E-30 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 PANTHER PTHR24322:SF639 586 615 1.6E-44 T 22-04-2016 YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 PANTHER PTHR24322:SF639 444 570 1.6E-44 T 22-04-2016 YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 446 681 5.5E-42 T 22-04-2016 YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 SMART SM01007 28 227 2.7E-30 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 441 458 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 512 523 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 586 605 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 607 624 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 224 1.9E-23 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 Gene3D G3DSA:3.40.50.720 437 683 1.7E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 SUPERFAMILY SSF51735 435 685 2.91E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 SUPERFAMILY SSF53639 26 228 1.51E-33 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 PANTHER PTHR24322 586 615 1.6E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 PANTHER PTHR24322 444 570 1.6E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1811 df33c29ad76795fd4fb0ea86e01b697d 688 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 573 601 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO0929 41fd499b90841d9abb5743182ad28b98 659 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 373 586 1.1E-23 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 369 2.4E-69 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 348 365 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 221 243 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 171 186 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 514 539 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 117 131 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 489 510 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 567 588 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 93 108 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01180 Arginine decarboxylase signature 197 218 1.0E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 125 143 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PANTHER PTHR11482:SF36 1 391 2.2E-293 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PANTHER PTHR11482:SF36 464 622 2.2E-293 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 Gene3D G3DSA:3.20.20.10 95 357 1.1E-60 T 22-04-2016 IPR029066 PLP-binding barrel YPO0929 41fd499b90841d9abb5743182ad28b98 659 Gene3D G3DSA:2.40.37.10 480 611 2.0E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 Gene3D G3DSA:2.40.37.10 358 381 2.0E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 658 42.642 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 SUPERFAMILY SSF51419 93 370 1.29E-67 T 22-04-2016 IPR029066 PLP-binding barrel YPO0929 41fd499b90841d9abb5743182ad28b98 659 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 302 315 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 657 1.1E-269 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 SUPERFAMILY SSF50621 482 588 1.57E-8 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PANTHER PTHR11482 1 391 2.2E-293 T 22-04-2016 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PANTHER PTHR11482 464 622 2.2E-293 T 22-04-2016 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PIRSF PIRSF001336 17 659 3.9E-254 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 147 159 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 143 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 358 377 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 567 580 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO0929 41fd499b90841d9abb5743182ad28b98 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 277 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.356 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 3.7E-148 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 Gene3D G3DSA:3.90.226.10 18 285 9.0E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 PANTHER PTHR22855 1 303 2.5E-184 T 22-04-2016 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 SUPERFAMILY SSF52096 25 283 4.66E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 Pfam PF01039 Carboxyl transferase domain 95 239 7.8E-18 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 PANTHER PTHR22855:SF17 1 303 2.5E-184 T 22-04-2016 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO2768 b586b8e158e306f8946653dd7ec87b4a 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YPO3241 c70ccc0943dfff81ea7b9c8e801ec2c7 246 Pfam PF03734 L,D-transpeptidase catalytic domain 43 158 4.7E-9 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 YPO3241 c70ccc0943dfff81ea7b9c8e801ec2c7 246 PANTHER PTHR36699 1 246 6.2E-76 T 22-04-2016 YPO3241 c70ccc0943dfff81ea7b9c8e801ec2c7 246 SUPERFAMILY SSF141523 40 158 5.23E-10 T 22-04-2016 YPO3734 8cd843d2872c809adee31f476290c84f 355 Gene3D G3DSA:3.20.20.210 2 353 7.6E-157 T 22-04-2016 YPO3734 8cd843d2872c809adee31f476290c84f 355 PANTHER PTHR21091 1 350 3.0E-161 T 22-04-2016 YPO3734 8cd843d2872c809adee31f476290c84f 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 4.0E-142 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3734 8cd843d2872c809adee31f476290c84f 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.333 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3734 8cd843d2872c809adee31f476290c84f 355 PANTHER PTHR21091:SF2 1 350 3.0E-161 T 22-04-2016 YPO3734 8cd843d2872c809adee31f476290c84f 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3734 8cd843d2872c809adee31f476290c84f 355 SUPERFAMILY SSF51726 2 353 8.02E-122 T 22-04-2016 YPO3734 8cd843d2872c809adee31f476290c84f 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3734 8cd843d2872c809adee31f476290c84f 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 346 1.8E-135 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 8.1E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 8.1E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 171 8.1E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 200 8.1E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 134 150 8.1E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 234 248 8.1E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 Pfam PF00771 FHIPEP family 29 663 2.0E-218 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 PIRSF PIRSF005419 1 676 2.5E-226 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 139 162 - T 22-04-2016 IPR025505 FHIPEP conserved site YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 16 671 1.2E-269 T 22-04-2016 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 PANTHER PTHR30161 1 674 0.0 T 22-04-2016 YPO0266 badb2cc8baaf31b7a3d8a488a9199a7d 682 PANTHER PTHR30161:SF3 1 674 0.0 T 22-04-2016 YPO3468 241751e87d874da801f732ae29d67c6a 388 Pfam PF05426 Alginate lyase 56 335 1.1E-76 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPO3468 241751e87d874da801f732ae29d67c6a 388 PANTHER PTHR41379 1 388 7.4E-183 T 22-04-2016 YPO3468 241751e87d874da801f732ae29d67c6a 388 PANTHER PTHR41379:SF1 1 388 7.4E-183 T 22-04-2016 YPO3468 241751e87d874da801f732ae29d67c6a 388 SUPERFAMILY SSF48230 63 338 2.84E-56 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YPO3468 241751e87d874da801f732ae29d67c6a 388 Gene3D G3DSA:1.50.10.110 38 361 1.1E-79 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPO1058 1a7349ff74bd00cf878cfe39953ef0cb 198 SUPERFAMILY SSF53098 5 196 5.01E-69 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1058 1a7349ff74bd00cf878cfe39953ef0cb 198 Pfam PF01351 Ribonuclease HII 14 189 1.1E-38 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain YPO1058 1a7349ff74bd00cf878cfe39953ef0cb 198 Gene3D G3DSA:3.30.420.10 12 152 8.4E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1058 1a7349ff74bd00cf878cfe39953ef0cb 198 PANTHER PTHR10954 5 198 3.3E-83 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 YPO1058 1a7349ff74bd00cf878cfe39953ef0cb 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 39.211 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 YPO0357 48cc513ee034453d5ceb1da451c76c5b 118 PIRSF PIRSF000179 1 118 2.5E-50 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YPO0357 48cc513ee034453d5ceb1da451c76c5b 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 118 26.641 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YPO0357 48cc513ee034453d5ceb1da451c76c5b 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 118 2.0E-48 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YPO0357 48cc513ee034453d5ceb1da451c76c5b 118 Pfam PF02313 Fumarate reductase subunit D 5 116 2.1E-50 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YPO0357 48cc513ee034453d5ceb1da451c76c5b 118 Gene3D G3DSA:1.20.1300.10 2 118 2.3E-54 T 22-04-2016 YPO0357 48cc513ee034453d5ceb1da451c76c5b 118 SUPERFAMILY SSF81343 1 118 1.16E-51 T 22-04-2016 YPO3585 4481fac7783ea2f498583a38d842c6be 160 SUPERFAMILY SSF55804 8 154 1.44E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPO3585 4481fac7783ea2f498583a38d842c6be 160 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 8 154 1.2E-59 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO3585 4481fac7783ea2f498583a38d842c6be 160 PANTHER PTHR30505 7 160 3.2E-81 T 22-04-2016 YPO3585 4481fac7783ea2f498583a38d842c6be 160 Gene3D G3DSA:3.40.930.10 5 154 1.9E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO3585 4481fac7783ea2f498583a38d842c6be 160 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO3585 4481fac7783ea2f498583a38d842c6be 160 PANTHER PTHR30505:SF6 7 160 3.2E-81 T 22-04-2016 YPO3585 4481fac7783ea2f498583a38d842c6be 160 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 154 2.5E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO0521 c0893999a45e1630cc05648248cbc5fa 519 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 3 509 7.0E-238 T 22-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 YPO0521 c0893999a45e1630cc05648248cbc5fa 519 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 355 509 6.1E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0521 c0893999a45e1630cc05648248cbc5fa 519 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 58 245 5.6E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0521 c0893999a45e1630cc05648248cbc5fa 519 SUPERFAMILY SSF161098 270 512 1.83E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0521 c0893999a45e1630cc05648248cbc5fa 519 PANTHER PTHR30183 2 519 8.0E-301 T 22-04-2016 YPO0521 c0893999a45e1630cc05648248cbc5fa 519 SUPERFAMILY SSF161098 4 248 2.35E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0521 c0893999a45e1630cc05648248cbc5fa 519 PANTHER PTHR30183:SF8 2 519 8.0E-301 T 22-04-2016 YPO0521 c0893999a45e1630cc05648248cbc5fa 519 Gene3D G3DSA:1.10.3720.10 6 250 1.0E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0521 c0893999a45e1630cc05648248cbc5fa 519 Gene3D G3DSA:1.10.3720.10 278 516 3.6E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1758 04f6721d7605175e690e3de309b270d5 324 PANTHER PTHR33799:SF3 3 324 1.9E-232 T 22-04-2016 YPO1758 04f6721d7605175e690e3de309b270d5 324 Pfam PF03610 PTS system fructose IIA component 5 116 3.6E-33 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPO1758 04f6721d7605175e690e3de309b270d5 324 SUPERFAMILY SSF53062 3 128 5.1E-37 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPO1758 04f6721d7605175e690e3de309b270d5 324 Gene3D G3DSA:3.40.35.10 163 323 7.2E-69 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPO1758 04f6721d7605175e690e3de309b270d5 324 Gene3D G3DSA:3.40.50.510 3 130 4.2E-47 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPO1758 04f6721d7605175e690e3de309b270d5 324 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 165 311 5.3E-58 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 YPO1758 04f6721d7605175e690e3de309b270d5 324 Pfam PF03830 PTS system sorbose subfamily IIB component 165 311 7.7E-57 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPO1758 04f6721d7605175e690e3de309b270d5 324 PANTHER PTHR33799 3 324 1.9E-232 T 22-04-2016 YPO1758 04f6721d7605175e690e3de309b270d5 324 SUPERFAMILY SSF52728 163 322 1.28E-56 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YPO1758 04f6721d7605175e690e3de309b270d5 324 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 116 5.2E-45 T 22-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO3901 cf067df5fecf3b92205c87340045d4b1 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 3.6E-41 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPO3901 cf067df5fecf3b92205c87340045d4b1 548 PANTHER PTHR18968 1 545 2.2E-259 T 22-04-2016 YPO3901 cf067df5fecf3b92205c87340045d4b1 548 SUPERFAMILY SSF52518 357 546 4.47E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3901 cf067df5fecf3b92205c87340045d4b1 548 SUPERFAMILY SSF52518 1 174 2.31E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3901 cf067df5fecf3b92205c87340045d4b1 548 Gene3D G3DSA:3.40.50.970 335 537 6.4E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3901 cf067df5fecf3b92205c87340045d4b1 548 Gene3D G3DSA:3.40.50.970 1 169 2.3E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3901 cf067df5fecf3b92205c87340045d4b1 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPO3901 cf067df5fecf3b92205c87340045d4b1 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 3.7E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPO3901 cf067df5fecf3b92205c87340045d4b1 548 PANTHER PTHR18968:SF116 1 545 2.2E-259 T 22-04-2016 YPO3901 cf067df5fecf3b92205c87340045d4b1 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.6E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPO3901 cf067df5fecf3b92205c87340045d4b1 548 Gene3D G3DSA:3.40.50.1220 184 334 1.9E-55 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO3901 cf067df5fecf3b92205c87340045d4b1 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 8.1E-214 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO3901 cf067df5fecf3b92205c87340045d4b1 548 SUPERFAMILY SSF52467 184 342 4.48E-57 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO2940 7a1a877cabed1f309d0521670678efbf 184 Gene3D G3DSA:2.60.40.1090 28 184 1.0E-27 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO2940 7a1a877cabed1f309d0521670678efbf 184 Pfam PF00419 Fimbrial protein 30 183 6.6E-14 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO2940 7a1a877cabed1f309d0521670678efbf 184 PANTHER PTHR33420:SF2 5 184 6.8E-106 T 22-04-2016 YPO2940 7a1a877cabed1f309d0521670678efbf 184 PANTHER PTHR33420 5 184 6.8E-106 T 22-04-2016 YPO2940 7a1a877cabed1f309d0521670678efbf 184 SUPERFAMILY SSF49401 36 184 4.97E-22 T 22-04-2016 IPR008966 Adhesion domain YPO1171 5611fe217a8dd6e3d3ede734a22df0c2 287 PIRSF PIRSF000477 7 284 3.1E-111 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 YPO1171 5611fe217a8dd6e3d3ede734a22df0c2 287 PANTHER PTHR11904 9 282 2.1E-124 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase YPO1171 5611fe217a8dd6e3d3ede734a22df0c2 287 Gene3D G3DSA:3.40.50.1580 20 282 1.5E-91 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO1171 5611fe217a8dd6e3d3ede734a22df0c2 287 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 35 282 6.0E-165 T 22-04-2016 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00119|UniPathway: UPA00606 YPO1171 5611fe217a8dd6e3d3ede734a22df0c2 287 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 35 281 3.0E-103 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 YPO1171 5611fe217a8dd6e3d3ede734a22df0c2 287 PANTHER PTHR11904:SF9 9 282 2.1E-124 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 YPO1171 5611fe217a8dd6e3d3ede734a22df0c2 287 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 35 280 3.8E-89 T 22-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 YPO1171 5611fe217a8dd6e3d3ede734a22df0c2 287 Pfam PF01048 Phosphorylase superfamily 36 282 4.4E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO1171 5611fe217a8dd6e3d3ede734a22df0c2 287 SUPERFAMILY SSF53167 20 283 4.19E-81 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YPO3359 cb5ce19a2617495042218086fca0b47c 349 PANTHER PTHR13326 1 348 4.4E-103 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3359 cb5ce19a2617495042218086fca0b47c 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3359 cb5ce19a2617495042218086fca0b47c 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 340 7.0E-81 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3359 cb5ce19a2617495042218086fca0b47c 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.516 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3359 cb5ce19a2617495042218086fca0b47c 349 SUPERFAMILY SSF55120 3 339 1.87E-106 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3359 cb5ce19a2617495042218086fca0b47c 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 166 1.4E-41 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO3359 cb5ce19a2617495042218086fca0b47c 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 189 336 9.2E-19 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO2973 03477ab5579b837456de755e493fca14 143 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 3 83 2.2E-46 T 22-04-2016 IPR032753 HicB-like antitoxin YPO3838 62f48ac284b300256b3c086a2aed2cb8 280 Gene3D G3DSA:1.20.5.460 257 280 0.001 T 22-04-2016 YPO3838 62f48ac284b300256b3c086a2aed2cb8 280 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 13 278 1.2E-133 T 22-04-2016 IPR009215 TIM-barrel domain, IGPS-like YPO3838 62f48ac284b300256b3c086a2aed2cb8 280 PIRSF PIRSF034452 5 280 1.0E-166 T 22-04-2016 IPR009215 TIM-barrel domain, IGPS-like YPO3838 62f48ac284b300256b3c086a2aed2cb8 280 SUPERFAMILY SSF51621 7 201 3.77E-85 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO3838 62f48ac284b300256b3c086a2aed2cb8 280 PANTHER PTHR31862 18 280 2.7E-110 T 22-04-2016 YPO3838 62f48ac284b300256b3c086a2aed2cb8 280 Gene3D G3DSA:3.20.20.70 2 256 1.2E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2240 66332152bdf87424b32dfa33c9b58fce 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 3.6E-63 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO2240 66332152bdf87424b32dfa33c9b58fce 233 PANTHER PTHR30586 1 220 1.2E-145 T 22-04-2016 YPO2240 66332152bdf87424b32dfa33c9b58fce 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 3.8E-83 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 YPO2240 66332152bdf87424b32dfa33c9b58fce 233 PANTHER PTHR30586:SF0 1 220 1.2E-145 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 YPO2240 66332152bdf87424b32dfa33c9b58fce 233 PIRSF PIRSF006102 1 218 7.7E-77 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO2240 66332152bdf87424b32dfa33c9b58fce 233 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.008 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 YPO0368 61e713807e3248faa9b5f160d6405d58 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 21.456 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPO0368 61e713807e3248faa9b5f160d6405d58 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 219 8.1E-49 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPO0368 61e713807e3248faa9b5f160d6405d58 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 503 23.404 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 YPO0368 61e713807e3248faa9b5f160d6405d58 504 PANTHER PTHR12592:SF0 6 504 6.4E-157 T 22-04-2016 YPO0368 61e713807e3248faa9b5f160d6405d58 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 232 499 1.2E-81 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 YPO0368 61e713807e3248faa9b5f160d6405d58 504 Gene3D G3DSA:3.40.1190.20 241 499 3.9E-92 T 22-04-2016 IPR029056 Ribokinase-like YPO0368 61e713807e3248faa9b5f160d6405d58 504 Gene3D G3DSA:3.40.50.10260 15 240 1.3E-64 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPO0368 61e713807e3248faa9b5f160d6405d58 504 Pfam PF01256 Carbohydrate kinase 258 495 1.1E-68 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 YPO0368 61e713807e3248faa9b5f160d6405d58 504 SUPERFAMILY SSF64153 16 256 3.53E-60 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPO0368 61e713807e3248faa9b5f160d6405d58 504 SUPERFAMILY SSF53613 232 499 1.08E-76 T 22-04-2016 IPR029056 Ribokinase-like YPO0368 61e713807e3248faa9b5f160d6405d58 504 PIRSF PIRSF017184 15 504 4.8E-142 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 YPO0368 61e713807e3248faa9b5f160d6405d58 504 PANTHER PTHR12592 6 504 6.4E-157 T 22-04-2016 YPO0368 61e713807e3248faa9b5f160d6405d58 504 Pfam PF03853 YjeF-related protein N-terminus 40 199 6.0E-39 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 Gene3D G3DSA:3.40.50.980 17 154 2.4E-19 T 22-04-2016 YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 Gene3D G3DSA:2.30.38.10 314 360 1.8E-7 T 22-04-2016 YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 455 4.6E-117 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 Pfam PF00501 AMP-binding enzyme 16 365 1.0E-50 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 Gene3D G3DSA:3.40.50.980 155 296 4.1E-20 T 22-04-2016 YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 PANTHER PTHR24096:SF109 10 460 1.6E-230 T 22-04-2016 YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 SUPERFAMILY SSF56801 11 462 6.93E-92 T 22-04-2016 YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 PANTHER PTHR24096 10 460 1.6E-230 T 22-04-2016 YPO2523 a84f7f82b9387fc9b1b2c19852ebfa94 471 Gene3D G3DSA:3.30.300.30 363 458 1.0E-14 T 22-04-2016 YPO4075 91e625928693d942438060520003742a 151 SUPERFAMILY SSF55729 1 134 4.36E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO4075 91e625928693d942438060520003742a 151 PANTHER PTHR23091 1 131 1.7E-47 T 22-04-2016 YPO4075 91e625928693d942438060520003742a 151 Gene3D G3DSA:3.40.630.30 1 133 1.5E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO4075 91e625928693d942438060520003742a 151 Pfam PF13673 Acetyltransferase (GNAT) domain 58 133 5.1E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO4075 91e625928693d942438060520003742a 151 PANTHER PTHR23091:SF266 1 131 1.7E-47 T 22-04-2016 YPO2871 3d930c20dcb434140018d68f6686ba28 487 PIRSF PIRSF000130 1 487 2.2E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPO2871 3d930c20dcb434140018d68f6686ba28 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.055 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPO2871 3d930c20dcb434140018d68f6686ba28 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 YPO2871 3d930c20dcb434140018d68f6686ba28 487 SMART SM00116 158 206 4.2E-9 T 22-04-2016 IPR000644 CBS domain YPO2871 3d930c20dcb434140018d68f6686ba28 487 SMART SM00116 96 144 7.2E-9 T 22-04-2016 IPR000644 CBS domain YPO2871 3d930c20dcb434140018d68f6686ba28 487 PANTHER PTHR11911:SF6 1 281 9.3E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPO2871 3d930c20dcb434140018d68f6686ba28 487 PANTHER PTHR11911:SF6 299 487 9.3E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPO2871 3d930c20dcb434140018d68f6686ba28 487 SUPERFAMILY SSF54631 95 203 3.16E-25 T 22-04-2016 YPO2871 3d930c20dcb434140018d68f6686ba28 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.6E-159 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 YPO2871 3d930c20dcb434140018d68f6686ba28 487 Pfam PF00571 CBS domain 95 140 1.0E-7 T 22-04-2016 IPR000644 CBS domain YPO2871 3d930c20dcb434140018d68f6686ba28 487 Pfam PF00571 CBS domain 149 202 3.8E-6 T 22-04-2016 IPR000644 CBS domain YPO2871 3d930c20dcb434140018d68f6686ba28 487 PANTHER PTHR11911 1 281 9.3E-247 T 22-04-2016 YPO2871 3d930c20dcb434140018d68f6686ba28 487 PANTHER PTHR11911 299 487 9.3E-247 T 22-04-2016 YPO2871 3d930c20dcb434140018d68f6686ba28 487 SUPERFAMILY SSF51412 217 477 8.37E-124 T 22-04-2016 YPO2871 3d930c20dcb434140018d68f6686ba28 487 SUPERFAMILY SSF51412 1 90 8.37E-124 T 22-04-2016 YPO2871 3d930c20dcb434140018d68f6686ba28 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 2.3E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YPO2871 3d930c20dcb434140018d68f6686ba28 487 SMART SM01240 7 473 0.0 T 22-04-2016 YPO2871 3d930c20dcb434140018d68f6686ba28 487 Gene3D G3DSA:3.20.20.70 2 485 3.9E-192 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3912 01af90948fa499a2c8fcf342512c2767 135 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 3 115 4.0E-50 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 YPO3912 01af90948fa499a2c8fcf342512c2767 135 Pfam PF07226 Protein of unknown function (DUF1422) 4 115 3.9E-51 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 YPO1489 847ec67415307b24bc13044f7840b11a 455 Pfam PF06812 ImpA, N-terminal, type VI secretion system 11 112 2.5E-19 T 22-04-2016 IPR010657 ImpA, N-terminal YPO1489 847ec67415307b24bc13044f7840b11a 455 PANTHER PTHR37024:SF1 7 453 2.2E-165 T 22-04-2016 YPO1489 847ec67415307b24bc13044f7840b11a 455 Pfam PF12486 Type VI secretion system, EvfB, or VasL 304 448 3.6E-49 T 22-04-2016 IPR021069 ImpA, C-terminal YPO1489 847ec67415307b24bc13044f7840b11a 455 PANTHER PTHR37024 7 453 2.2E-165 T 22-04-2016 YPO1128 372147d5400d43f31fb791ab162779f8 241 PANTHER PTHR36122:SF2 133 241 2.0E-132 T 22-04-2016 YPO1128 372147d5400d43f31fb791ab162779f8 241 PANTHER PTHR36122:SF2 1 110 2.0E-132 T 22-04-2016 YPO1128 372147d5400d43f31fb791ab162779f8 241 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 2.5E-53 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 YPO1128 372147d5400d43f31fb791ab162779f8 241 PANTHER PTHR36122 133 241 2.0E-132 T 22-04-2016 YPO1128 372147d5400d43f31fb791ab162779f8 241 PANTHER PTHR36122 1 110 2.0E-132 T 22-04-2016 YPO1128 372147d5400d43f31fb791ab162779f8 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 229 4.6E-63 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 YPO2672 398bf751a0d367c41c026bc9c3af519b 330 TIGRFAM TIGR03441 urea_trans_yut: urea transporter 21 319 7.9E-117 T 22-04-2016 IPR017807 Urea transporter, bacteria GO:0015204|GO:0016021|GO:0071918 YPO2672 398bf751a0d367c41c026bc9c3af519b 330 Pfam PF03253 Urea transporter 24 320 1.1E-93 T 22-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 YPO2672 398bf751a0d367c41c026bc9c3af519b 330 PANTHER PTHR10464 1 330 1.0E-276 T 22-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 YPO2672 398bf751a0d367c41c026bc9c3af519b 330 Gene3D G3DSA:1.10.3430.10 11 324 2.5E-95 T 22-04-2016 IPR029020 Ammonium/urea transporter YPO2672 398bf751a0d367c41c026bc9c3af519b 330 PANTHER PTHR10464:SF8 1 330 1.0E-276 T 22-04-2016 YPO2672 398bf751a0d367c41c026bc9c3af519b 330 PIRSF PIRSF016502 7 330 2.4E-104 T 22-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 YPO2868 f80c954abbd635dff0753588883dc701 159 SUPERFAMILY SSF141452 5 158 4.45E-37 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2868 f80c954abbd635dff0753588883dc701 159 PANTHER PTHR34319 1 159 2.3E-81 T 22-04-2016 YPO2868 f80c954abbd635dff0753588883dc701 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 157 6.5E-61 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2868 f80c954abbd635dff0753588883dc701 159 Pfam PF05638 Type VI secretion system effector, Hcp 28 143 3.7E-24 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2868 f80c954abbd635dff0753588883dc701 159 Gene3D G3DSA:2.30.110.20 1 152 1.2E-20 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 3.1E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Gene3D G3DSA:2.40.50.140 16 154 8.9E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PANTHER PTHR22594:SF4 1 503 4.5E-290 T 22-04-2016 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PIRSF PIRSF039101 1 505 9.3E-199 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Gene3D G3DSA:3.30.930.10 157 500 2.7E-121 T 22-04-2016 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 SUPERFAMILY SSF50249 13 155 1.52E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 SUPERFAMILY SSF55681 162 502 3.06E-123 T 22-04-2016 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 2.0E-228 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.105 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 PANTHER PTHR22594 1 503 4.5E-290 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO0888 2eb0b668ab57d3d6b1fe98f46b2a3a99 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.1E-82 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO1778 8a771f8c88b18e4272932d4a91d6821f 102 PIRSF PIRSF029143 1 102 6.8E-49 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 YPO1778 8a771f8c88b18e4272932d4a91d6821f 102 Gene3D G3DSA:2.30.130.30 2 100 3.6E-44 T 22-04-2016 YPO1778 8a771f8c88b18e4272932d4a91d6821f 102 SMART SM01022 5 101 3.1E-24 T 22-04-2016 IPR007374 ASCH domain YPO1778 8a771f8c88b18e4272932d4a91d6821f 102 Pfam PF04266 ASCH domain 6 92 3.3E-13 T 22-04-2016 IPR007374 ASCH domain YPO1778 8a771f8c88b18e4272932d4a91d6821f 102 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 31.61 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 YPO1778 8a771f8c88b18e4272932d4a91d6821f 102 PANTHER PTHR38088 1 102 1.4E-68 T 22-04-2016 YPO1778 8a771f8c88b18e4272932d4a91d6821f 102 SUPERFAMILY SSF88697 2 100 5.3E-31 T 22-04-2016 IPR015947 PUA-like domain YPO1778 8a771f8c88b18e4272932d4a91d6821f 102 PANTHER PTHR38088:SF2 1 102 1.4E-68 T 22-04-2016 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 1.1E-10 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 Gene3D G3DSA:1.10.540.10 95 234 5.0E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 2.0E-118 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 SUPERFAMILY SSF56645 119 355 7.72E-46 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 SUPERFAMILY SSF47203 360 507 5.15E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 Gene3D G3DSA:2.40.110.10 237 348 3.5E-16 T 22-04-2016 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 PANTHER PTHR10909:SF321 49 531 0.0 T 22-04-2016 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 PANTHER PTHR10909 49 531 0.0 T 22-04-2016 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 4.9E-17 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 YPO3244 e99ac255caeec44f1e448ab39ffb6451 815 Gene3D G3DSA:1.20.140.10 349 507 4.3E-22 T 22-04-2016 YPO1188 f43f497355e75626542644509c0456f9 533 Gene3D G3DSA:1.25.10.10 122 229 6.5E-10 T 22-04-2016 IPR011989 Armadillo-like helical YPO1188 f43f497355e75626542644509c0456f9 533 PANTHER PTHR11795 168 533 3.8E-180 T 22-04-2016 YPO1188 f43f497355e75626542644509c0456f9 533 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 239 530 6.7E-129 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type YPO1188 f43f497355e75626542644509c0456f9 533 Pfam PF02653 Branched-chain amino acid transport system / permease component 241 516 1.5E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO1188 f43f497355e75626542644509c0456f9 533 Pfam PF13646 HEAT repeats 176 230 9.0E-9 T 22-04-2016 YPO1188 f43f497355e75626542644509c0456f9 533 SUPERFAMILY SSF48371 122 229 1.01E-11 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 YPO1188 f43f497355e75626542644509c0456f9 533 PANTHER PTHR11795:SF349 168 533 3.8E-180 T 22-04-2016 YPO3925 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 SUPERFAMILY SSF53633 2 255 1.7E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3925 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 Pfam PF00696 Amino acid kinase family 4 234 1.1E-39 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3925 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 1.7E-73 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3925 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 25.646 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3925 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 Gene3D G3DSA:3.40.1160.10 2 255 5.0E-78 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YPO3925 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 PANTHER PTHR23342 1 255 4.5E-99 T 22-04-2016 YPO3925 a2f2b091669af1bfb0e5f9c3f3dbfef0 257 PIRSF PIRSF000728 1 257 5.1E-71 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO1089 a862626803372bb73257f79d21f75ffd 362 SUPERFAMILY SSF52540 33 239 5.63E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1089 a862626803372bb73257f79d21f75ffd 362 Pfam PF13481 AAA domain 23 197 9.0E-42 T 22-04-2016 YPO1089 a862626803372bb73257f79d21f75ffd 362 Gene3D G3DSA:3.40.50.300 21 269 2.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPMT1.15c f7f82ac95c4877961aeb0aacd9608d85 127 PANTHER PTHR19136 2 126 8.9E-32 T 22-04-2016 YPMT1.15c f7f82ac95c4877961aeb0aacd9608d85 127 PANTHER PTHR19136:SF81 2 126 8.9E-32 T 22-04-2016 YPMT1.15c f7f82ac95c4877961aeb0aacd9608d85 127 Pfam PF12804 MobA-like NTP transferase domain 2 123 6.2E-24 T 22-04-2016 IPR025877 MobA-like NTP transferase YPMT1.15c f7f82ac95c4877961aeb0aacd9608d85 127 SUPERFAMILY SSF53448 2 122 1.23E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPMT1.15c f7f82ac95c4877961aeb0aacd9608d85 127 Gene3D G3DSA:3.90.550.10 1 126 4.5E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPMT1.15c f7f82ac95c4877961aeb0aacd9608d85 127 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 1 126 6.1E-46 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 YPO0659 bd87ce7bc8f06d5d914f528e3363c602 260 Gene3D G3DSA:3.40.830.10 2 260 8.1E-97 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPO0659 bd87ce7bc8f06d5d914f528e3363c602 260 PANTHER PTHR30096:SF0 1 260 8.6E-107 T 22-04-2016 YPO0659 bd87ce7bc8f06d5d914f528e3363c602 260 PANTHER PTHR30096 1 260 8.6E-107 T 22-04-2016 YPO0659 bd87ce7bc8f06d5d914f528e3363c602 260 SUPERFAMILY SSF53213 5 260 4.97E-92 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPO0659 bd87ce7bc8f06d5d914f528e3363c602 260 PIRSF PIRSF006157 1 260 3.2E-92 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 YPO0659 bd87ce7bc8f06d5d914f528e3363c602 260 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 10 257 2.1E-32 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPO0896 5f1418e722a1339403ca44df01a11363 233 Gene3D G3DSA:1.10.10.10 132 229 2.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0896 5f1418e722a1339403ca44df01a11363 233 SUPERFAMILY SSF52172 2 125 2.42E-36 T 22-04-2016 IPR011006 CheY-like superfamily YPO0896 5f1418e722a1339403ca44df01a11363 233 PANTHER PTHR26402 4 229 1.6E-162 T 22-04-2016 YPO0896 5f1418e722a1339403ca44df01a11363 233 SMART SM00862 153 229 1.4E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0896 5f1418e722a1339403ca44df01a11363 233 Pfam PF00072 Response regulator receiver domain 6 115 9.5E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0896 5f1418e722a1339403ca44df01a11363 233 SUPERFAMILY SSF46894 131 229 1.68E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO0896 5f1418e722a1339403ca44df01a11363 233 PANTHER PTHR26402:SF573 4 229 1.6E-162 T 22-04-2016 YPO0896 5f1418e722a1339403ca44df01a11363 233 SMART SM00448 4 115 2.0E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0896 5f1418e722a1339403ca44df01a11363 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 229 1.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0896 5f1418e722a1339403ca44df01a11363 233 Gene3D G3DSA:3.40.50.2300 5 124 1.6E-35 T 22-04-2016 YPO3406 9f1a7b9b74d6ed4c5d96abdf978914b0 308 Pfam PF00005 ABC transporter 21 165 1.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3406 9f1a7b9b74d6ed4c5d96abdf978914b0 308 Gene3D G3DSA:3.40.50.300 3 228 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3406 9f1a7b9b74d6ed4c5d96abdf978914b0 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3406 9f1a7b9b74d6ed4c5d96abdf978914b0 308 SUPERFAMILY SSF52540 3 234 1.63E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3406 9f1a7b9b74d6ed4c5d96abdf978914b0 308 SMART SM00382 30 213 1.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3406 9f1a7b9b74d6ed4c5d96abdf978914b0 308 PANTHER PTHR24220 6 301 5.3E-187 T 22-04-2016 YPO3406 9f1a7b9b74d6ed4c5d96abdf978914b0 308 PANTHER PTHR24220:SF305 6 301 5.3E-187 T 22-04-2016 YPO3639 9867c20fd5abda541b9ed97ab64a9d8e 284 SUPERFAMILY SSF52833 40 132 4.68E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3639 9867c20fd5abda541b9ed97ab64a9d8e 284 SUPERFAMILY SSF47616 182 260 9.75E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO3639 9867c20fd5abda541b9ed97ab64a9d8e 284 SUPERFAMILY SSF47616 118 153 9.75E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO3639 9867c20fd5abda541b9ed97ab64a9d8e 284 Gene3D G3DSA:1.20.1050.10 132 255 5.0E-43 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO3639 9867c20fd5abda541b9ed97ab64a9d8e 284 Pfam PF00043 Glutathione S-transferase, C-terminal domain 183 251 1.7E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YPO3639 9867c20fd5abda541b9ed97ab64a9d8e 284 PANTHER PTHR11260 19 261 1.7E-128 T 22-04-2016 YPO3639 9867c20fd5abda541b9ed97ab64a9d8e 284 Pfam PF02798 Glutathione S-transferase, N-terminal domain 45 127 4.4E-9 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPO3639 9867c20fd5abda541b9ed97ab64a9d8e 284 PANTHER PTHR11260:SF258 19 261 1.7E-128 T 22-04-2016 YPO3639 9867c20fd5abda541b9ed97ab64a9d8e 284 Gene3D G3DSA:3.40.30.10 36 131 1.1E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 SUPERFAMILY SSF50331 235 350 1.04E-23 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 Pfam PF03459 TOBE domain 290 349 7.6E-17 T 22-04-2016 IPR005116 Transport-associated OB, type 1 YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 PANTHER PTHR24220 1 256 6.2E-116 T 22-04-2016 YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 PANTHER PTHR24220 272 301 6.2E-116 T 22-04-2016 YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 SUPERFAMILY SSF52540 7 221 3.72E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 Pfam PF00005 ABC transporter 17 156 2.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 Gene3D G3DSA:2.40.50.100 278 348 1.4E-22 T 22-04-2016 YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 PANTHER PTHR24220:SF284 1 256 6.2E-116 T 22-04-2016 YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 PANTHER PTHR24220:SF284 272 301 6.2E-116 T 22-04-2016 YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 Gene3D G3DSA:3.40.50.300 18 220 1.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 2.8E-152 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 SMART SM00382 23 206 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1147 7d59da2769cdb89eceaec6c7f8092ff1 359 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 290 349 6.3E-17 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 YPO3396 bc0f4741387ffe3a070f2daa679f9e2b 245 PANTHER PTHR30545 2 243 2.8E-94 T 22-04-2016 YPO3396 bc0f4741387ffe3a070f2daa679f9e2b 245 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 2 235 56.151 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein YPO3396 bc0f4741387ffe3a070f2daa679f9e2b 245 Pfam PF03749 Sugar fermentation stimulation protein 15 227 5.4E-75 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein YPO3396 bc0f4741387ffe3a070f2daa679f9e2b 245 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 233 7.2E-81 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein YPO3396 bc0f4741387ffe3a070f2daa679f9e2b 245 PANTHER PTHR30545:SF2 2 243 2.8E-94 T 22-04-2016 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 Gene3D G3DSA:3.40.50.720 2 202 2.8E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 SUPERFAMILY SSF48179 204 384 1.26E-46 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 Gene3D G3DSA:1.10.1040.10 203 384 2.3E-48 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 PANTHER PTHR30524 1 385 1.5E-221 T 22-04-2016 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 372 1.2E-64 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 SUPERFAMILY SSF51735 1 203 7.34E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 2.7E-25 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 40.66 T 22-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO4067 3622b7a5149f9bec5570c1293dfef39b 387 PANTHER PTHR30524:SF0 1 385 1.5E-221 T 22-04-2016 YPO2265 9c4a913c62def8905555c0d0eaf9b9d1 311 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 1.3E-136 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPO2265 9c4a913c62def8905555c0d0eaf9b9d1 311 Gene3D G3DSA:3.50.14.10 236 281 1.7E-92 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPO2265 9c4a913c62def8905555c0d0eaf9b9d1 311 Gene3D G3DSA:3.50.14.10 7 173 1.7E-92 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPO2265 9c4a913c62def8905555c0d0eaf9b9d1 311 Gene3D G3DSA:3.30.54.10 174 235 5.1E-34 T 22-04-2016 YPO2265 9c4a913c62def8905555c0d0eaf9b9d1 311 Gene3D G3DSA:3.30.54.10 295 308 5.1E-34 T 22-04-2016 YPO2265 9c4a913c62def8905555c0d0eaf9b9d1 311 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 43.736 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPO2265 9c4a913c62def8905555c0d0eaf9b9d1 311 SUPERFAMILY SSF56596 5 307 5.62E-122 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPO2265 9c4a913c62def8905555c0d0eaf9b9d1 311 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 1.3E-170 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 Gene3D G3DSA:3.20.20.120 123 298 1.8E-49 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 Gene3D G3DSA:3.30.390.10 1 122 2.5E-29 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 PANTHER PTHR13794:SF8 6 311 5.3E-112 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 4.1E-116 T 22-04-2016 YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 315 25.432 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 PANTHER PTHR13794 6 311 5.3E-112 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 SUPERFAMILY SSF54826 1 98 1.77E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 Pfam PF13378 Enolase C-terminal domain-like 127 282 2.8E-14 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 SMART SM00922 115 210 5.6E-9 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPO2524 da44e54a1cdb09118e6c0d11cf0ac1ae 323 SUPERFAMILY SSF51604 108 307 1.83E-51 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YPO1533 e50fcc9d387395ec45ea0ba679154d88 282 SUPERFAMILY SSF52540 24 251 6.01E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1533 e50fcc9d387395ec45ea0ba679154d88 282 Pfam PF00005 ABC transporter 42 189 7.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1533 e50fcc9d387395ec45ea0ba679154d88 282 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1533 e50fcc9d387395ec45ea0ba679154d88 282 SMART SM00382 50 237 5.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1533 e50fcc9d387395ec45ea0ba679154d88 282 Gene3D G3DSA:3.40.50.300 20 260 8.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1533 e50fcc9d387395ec45ea0ba679154d88 282 PANTHER PTHR24220 27 280 1.2E-153 T 22-04-2016 YPO1533 e50fcc9d387395ec45ea0ba679154d88 282 PANTHER PTHR24220:SF438 27 280 1.2E-153 T 22-04-2016 YPO0720 98344f96342e234b2f86f0b2d2f77665 88 SUPERFAMILY SSF101498 42 85 1.03E-6 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YPO0720 98344f96342e234b2f86f0b2d2f77665 88 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 86 6.3E-14 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YPO0720 98344f96342e234b2f86f0b2d2f77665 88 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 84 3.5E-6 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YPO3536 4f15fa63384c41e4a50f109311453b3f 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.329 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3536 4f15fa63384c41e4a50f109311453b3f 150 SUPERFAMILY SSF55658 1 57 4.01E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YPO3536 4f15fa63384c41e4a50f109311453b3f 150 Gene3D G3DSA:3.10.430.100 61 149 2.9E-27 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal YPO3536 4f15fa63384c41e4a50f109311453b3f 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal YPO3536 4f15fa63384c41e4a50f109311453b3f 150 PANTHER PTHR21368 1 150 8.0E-53 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3536 4f15fa63384c41e4a50f109311453b3f 150 Gene3D G3DSA:3.40.5.10 1 52 2.6E-25 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal YPO3536 4f15fa63384c41e4a50f109311453b3f 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 5.5E-58 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3536 4f15fa63384c41e4a50f109311453b3f 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 3.9E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal YPO3536 4f15fa63384c41e4a50f109311453b3f 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 4.8E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal YPO3536 4f15fa63384c41e4a50f109311453b3f 150 SUPERFAMILY SSF55653 60 149 1.83E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal YPO0181 95ed86ffdc9d66b1eae745039407e562 200 PANTHER PTHR30086 1 190 3.2E-93 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO0181 95ed86ffdc9d66b1eae745039407e562 200 PANTHER PTHR30086:SF12 1 190 3.2E-93 T 22-04-2016 YPO0181 95ed86ffdc9d66b1eae745039407e562 200 Pfam PF01810 LysE type translocator 16 178 1.4E-15 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO1262 c3e5f6f6fdd9906953feb70413b94900 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.232 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 YPO1262 c3e5f6f6fdd9906953feb70413b94900 334 PANTHER PTHR38772 2 334 9.5E-184 T 22-04-2016 YPO1262 c3e5f6f6fdd9906953feb70413b94900 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.0E-99 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 YPO0019 b858999102eff2e0dcf3d3eb962f8031 216 Pfam PF01926 50S ribosome-binding GTPase 30 148 1.3E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO0019 b858999102eff2e0dcf3d3eb962f8031 216 Gene3D G3DSA:3.40.50.300 12 200 5.8E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0019 b858999102eff2e0dcf3d3eb962f8031 216 PANTHER PTHR11649 4 206 4.9E-59 T 22-04-2016 YPO0019 b858999102eff2e0dcf3d3eb962f8031 216 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.43 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 YPO0019 b858999102eff2e0dcf3d3eb962f8031 216 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 6.8E-73 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 YPO0019 b858999102eff2e0dcf3d3eb962f8031 216 SUPERFAMILY SSF52540 19 201 1.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3104 25676045d30d1faa3f21dc8d96e1bbee 337 PANTHER PTHR12526:SF399 1 335 1.4E-53 T 22-04-2016 YPO3104 25676045d30d1faa3f21dc8d96e1bbee 337 PANTHER PTHR12526 1 335 1.4E-53 T 22-04-2016 YPO3104 25676045d30d1faa3f21dc8d96e1bbee 337 Gene3D G3DSA:3.40.50.2000 171 300 5.9E-16 T 22-04-2016 YPO3104 25676045d30d1faa3f21dc8d96e1bbee 337 Pfam PF00534 Glycosyl transferases group 1 165 305 6.3E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YPO3104 25676045d30d1faa3f21dc8d96e1bbee 337 Pfam PF13439 Glycosyltransferase Family 4 54 156 3.3E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain YPO3104 25676045d30d1faa3f21dc8d96e1bbee 337 SUPERFAMILY SSF53756 1 335 2.2E-63 T 22-04-2016 YPO2233 79410f6b98172dd158f05ac0ecfbe802 101 Pfam PF04328 Protein of unknown function (DUF466) 38 101 1.2E-24 T 22-04-2016 IPR007423 Protein of unknown function DUF466 YPO2233 79410f6b98172dd158f05ac0ecfbe802 101 PANTHER PTHR38453:SF1 26 100 2.6E-48 T 22-04-2016 YPO2233 79410f6b98172dd158f05ac0ecfbe802 101 PANTHER PTHR38453 26 100 2.6E-48 T 22-04-2016 YPO4006 904713339439af4202296d612cf4d556 463 Gene3D G3DSA:2.160.20.10 71 348 5.7E-68 T 22-04-2016 IPR012334 Pectin lyase fold YPO4006 904713339439af4202296d612cf4d556 463 Pfam PF05860 haemagglutination activity domain 70 183 8.9E-24 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO4006 904713339439af4202296d612cf4d556 463 PANTHER PTHR32093:SF41 72 463 1.1E-24 T 22-04-2016 YPO4006 904713339439af4202296d612cf4d556 463 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 300 340 1.4E-5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO4006 904713339439af4202296d612cf4d556 463 PANTHER PTHR32093 72 463 1.1E-24 T 22-04-2016 YPO4006 904713339439af4202296d612cf4d556 463 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 85 180 2.8E-18 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO4006 904713339439af4202296d612cf4d556 463 SUPERFAMILY SSF51126 70 346 6.28E-45 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO4006 904713339439af4202296d612cf4d556 463 SMART SM00912 67 184 5.8E-34 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO1998 a55b9f65a8e641af4f8b099dd32c1cf9 156 SUPERFAMILY SSF51182 35 155 3.56E-29 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO1998 a55b9f65a8e641af4f8b099dd32c1cf9 156 Pfam PF07883 Cupin domain 66 132 2.4E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YPO1998 a55b9f65a8e641af4f8b099dd32c1cf9 156 PANTHER PTHR33570 1 156 2.7E-65 T 22-04-2016 YPO1998 a55b9f65a8e641af4f8b099dd32c1cf9 156 PANTHER PTHR33570:SF5 1 156 2.7E-65 T 22-04-2016 YPO1998 a55b9f65a8e641af4f8b099dd32c1cf9 156 Gene3D G3DSA:2.60.120.10 33 154 1.4E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO3889 99529294db5027b3527effe8b96132a3 293 PANTHER PTHR30126 1 293 3.3E-191 T 22-04-2016 YPO3889 99529294db5027b3527effe8b96132a3 293 Pfam PF03466 LysR substrate binding domain 89 293 1.0E-38 T 22-04-2016 IPR005119 LysR, substrate-binding YPO3889 99529294db5027b3527effe8b96132a3 293 Gene3D G3DSA:3.40.190.10 90 175 1.2E-15 T 22-04-2016 YPO3889 99529294db5027b3527effe8b96132a3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3889 99529294db5027b3527effe8b96132a3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3889 99529294db5027b3527effe8b96132a3 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3889 99529294db5027b3527effe8b96132a3 293 PANTHER PTHR30126:SF14 1 293 3.3E-191 T 22-04-2016 YPO3889 99529294db5027b3527effe8b96132a3 293 SUPERFAMILY SSF53850 89 293 7.72E-33 T 22-04-2016 YPO3889 99529294db5027b3527effe8b96132a3 293 SUPERFAMILY SSF46785 1 111 8.92E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3889 99529294db5027b3527effe8b96132a3 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3889 99529294db5027b3527effe8b96132a3 293 Gene3D G3DSA:1.10.10.10 1 84 2.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3889 99529294db5027b3527effe8b96132a3 293 Gene3D G3DSA:3.40.190.10 176 252 3.5E-12 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 Pfam PF12468 Type III secretion system leucine rich repeat protein 1 60 2.3E-21 T 22-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPO1005 89bb3a50c3d3549b552c47db11cee255 626 PANTHER PTHR24365 73 303 7.9E-21 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 PANTHER PTHR24365 615 621 7.9E-21 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SMART SM00364 212 231 1.2 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SMART SM00364 108 127 4.6E-4 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SMART SM00364 129 148 0.0046 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SMART SM00364 233 252 0.21 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SMART SM00364 254 273 0.24 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SMART SM00364 191 210 9.4E-4 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SMART SM00364 87 106 540.0 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SMART SM00364 150 169 480.0 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SMART SM00364 171 190 10.0 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 SUPERFAMILY SSF52058 60 302 4.08E-34 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPO1005 89bb3a50c3d3549b552c47db11cee255 626 Gene3D G3DSA:1.20.58.90 543 619 4.6E-27 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 Gene3D G3DSA:3.80.10.10 72 301 2.9E-41 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPO1005 89bb3a50c3d3549b552c47db11cee255 626 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 331 546 6.9E-74 T 22-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPO1005 89bb3a50c3d3549b552c47db11cee255 626 Gene3D G3DSA:1.20.1270.130 323 403 3.4E-28 T 22-04-2016 YPO1005 89bb3a50c3d3549b552c47db11cee255 626 Gene3D G3DSA:1.20.58.360 405 541 5.4E-51 T 22-04-2016 YPO2536 d593b98a10bb2f0c9fd1bf7f3c149780 316 SUPERFAMILY SSF51735 103 284 3.76E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2536 d593b98a10bb2f0c9fd1bf7f3c149780 316 PANTHER PTHR10996 1 314 1.0E-139 T 22-04-2016 YPO2536 d593b98a10bb2f0c9fd1bf7f3c149780 316 PANTHER PTHR10996:SF152 1 314 1.0E-139 T 22-04-2016 YPO2536 d593b98a10bb2f0c9fd1bf7f3c149780 316 Gene3D G3DSA:3.40.50.720 117 286 3.6E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2536 d593b98a10bb2f0c9fd1bf7f3c149780 316 SUPERFAMILY SSF52283 5 137 1.59E-30 T 22-04-2016 YPO2536 d593b98a10bb2f0c9fd1bf7f3c149780 316 Gene3D G3DSA:3.40.50.720 7 116 3.2E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2536 d593b98a10bb2f0c9fd1bf7f3c149780 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 283 1.2E-48 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPO2536 d593b98a10bb2f0c9fd1bf7f3c149780 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 314 6.7E-25 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPO1311 afa58f0ebc8cdbbac642fd1e7d90082d 360 Pfam PF01032 FecCD transport family 42 355 1.5E-84 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO1311 afa58f0ebc8cdbbac642fd1e7d90082d 360 PANTHER PTHR30472 6 360 8.8E-191 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO1311 afa58f0ebc8cdbbac642fd1e7d90082d 360 Gene3D G3DSA:1.10.3470.10 24 357 2.1E-97 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO1311 afa58f0ebc8cdbbac642fd1e7d90082d 360 PANTHER PTHR30472:SF25 6 360 8.8E-191 T 22-04-2016 YPO1311 afa58f0ebc8cdbbac642fd1e7d90082d 360 SUPERFAMILY SSF81345 24 355 2.88E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO2929 1c661d56ddb0128124d64094ea58a160 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 93 1.0E-44 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO2929 1c661d56ddb0128124d64094ea58a160 126 Gene3D G3DSA:3.90.470.20 1 125 1.2E-42 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO2929 1c661d56ddb0128124d64094ea58a160 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 7.4E-27 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO2929 1c661d56ddb0128124d64094ea58a160 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 6.0E-53 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO2929 1c661d56ddb0128124d64094ea58a160 126 SUPERFAMILY SSF56214 3 125 2.49E-30 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO2929 1c661d56ddb0128124d64094ea58a160 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 3.1E-37 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO2929 1c661d56ddb0128124d64094ea58a160 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.412 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO0129 8607cac34339f5ddfbcf98a94f3369f4 258 SUPERFAMILY SSF53474 3 252 5.73E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0129 8607cac34339f5ddfbcf98a94f3369f4 258 Gene3D G3DSA:3.40.50.1820 3 255 8.7E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0129 8607cac34339f5ddfbcf98a94f3369f4 258 PANTHER PTHR10992:SF812 1 255 1.9E-144 T 22-04-2016 YPO0129 8607cac34339f5ddfbcf98a94f3369f4 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 1.4E-100 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 YPO0129 8607cac34339f5ddfbcf98a94f3369f4 258 PANTHER PTHR10992 1 255 1.9E-144 T 22-04-2016 YPO0129 8607cac34339f5ddfbcf98a94f3369f4 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.43 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 YPO0129 8607cac34339f5ddfbcf98a94f3369f4 258 Pfam PF00561 alpha/beta hydrolase fold 16 242 2.3E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO2049 251fcadd55151165ed09acc532a8779b 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 3.0E-165 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like YPO2049 251fcadd55151165ed09acc532a8779b 323 PANTHER PTHR10108 71 322 4.5E-140 T 22-04-2016 YPO2049 251fcadd55151165ed09acc532a8779b 323 PANTHER PTHR10108:SF847 71 322 4.5E-140 T 22-04-2016 YPO2049 251fcadd55151165ed09acc532a8779b 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 322 54.277 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 YPO2049 251fcadd55151165ed09acc532a8779b 323 SUPERFAMILY SSF53335 89 317 4.29E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2049 251fcadd55151165ed09acc532a8779b 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 3.4E-146 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 YPO2049 251fcadd55151165ed09acc532a8779b 323 Gene3D G3DSA:3.40.50.150 91 316 4.1E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2740 10ff0c94b2b06b8644d2573e6eb4bd81 188 PANTHER PTHR10681:SF107 4 185 3.7E-87 T 22-04-2016 YPO2740 10ff0c94b2b06b8644d2573e6eb4bd81 188 Gene3D G3DSA:3.40.30.10 15 183 2.2E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2740 10ff0c94b2b06b8644d2573e6eb4bd81 188 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPO2740 10ff0c94b2b06b8644d2573e6eb4bd81 188 PANTHER PTHR10681 4 185 3.7E-87 T 22-04-2016 YPO2740 10ff0c94b2b06b8644d2573e6eb4bd81 188 SUPERFAMILY SSF52833 51 184 3.25E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2740 10ff0c94b2b06b8644d2573e6eb4bd81 188 Pfam PF08534 Redoxin 47 169 1.0E-24 T 22-04-2016 IPR013740 Redoxin GO:0016491 YPO2740 10ff0c94b2b06b8644d2573e6eb4bd81 188 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 11 183 2.4E-75 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 YPO4089 5207dfe34fb7b1b16b784030c54b2c01 320 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YPO4089 5207dfe34fb7b1b16b784030c54b2c01 320 PANTHER PTHR10314:SF30 6 308 5.4E-117 T 22-04-2016 YPO4089 5207dfe34fb7b1b16b784030c54b2c01 320 PANTHER PTHR10314 6 308 5.4E-117 T 22-04-2016 YPO4089 5207dfe34fb7b1b16b784030c54b2c01 320 Gene3D G3DSA:3.40.50.1100 71 313 5.4E-68 T 22-04-2016 YPO4089 5207dfe34fb7b1b16b784030c54b2c01 320 SUPERFAMILY SSF53686 6 308 1.96E-91 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO4089 5207dfe34fb7b1b16b784030c54b2c01 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 305 4.5E-83 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3717 addd5a07e6a65e62b6e165a69db113cc 135 PANTHER PTHR37819:SF1 1 135 8.4E-52 T 22-04-2016 YPO3717 addd5a07e6a65e62b6e165a69db113cc 135 PANTHER PTHR37819 1 135 8.4E-52 T 22-04-2016 YPO3717 addd5a07e6a65e62b6e165a69db113cc 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 25.941 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 YPO3717 addd5a07e6a65e62b6e165a69db113cc 135 PIRSF PIRSF029598 1 135 1.7E-48 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 YPO3717 addd5a07e6a65e62b6e165a69db113cc 135 Pfam PF06146 Phosphate-starvation-inducible E 60 122 5.6E-16 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like YPO2051 4f9a4da33a91045c362033b3a2b9f65b 131 PANTHER PTHR35814 1 131 1.6E-75 T 22-04-2016 YPO2051 4f9a4da33a91045c362033b3a2b9f65b 131 Pfam PF01124 MAPEG family 4 120 2.2E-24 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YPO2051 4f9a4da33a91045c362033b3a2b9f65b 131 Gene3D G3DSA:1.20.120.550 4 123 5.1E-23 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain YPO2051 4f9a4da33a91045c362033b3a2b9f65b 131 PANTHER PTHR35814:SF2 1 131 1.6E-75 T 22-04-2016 YPO2051 4f9a4da33a91045c362033b3a2b9f65b 131 SUPERFAMILY SSF161084 4 125 8.11E-30 T 22-04-2016 YPO1556 c7421fb27747acdf88ca873d623be70d 363 Gene3D G3DSA:3.40.50.1970 6 160 2.0E-32 T 22-04-2016 YPO1556 c7421fb27747acdf88ca873d623be70d 363 Gene3D G3DSA:1.20.1090.10 162 358 3.7E-49 T 22-04-2016 YPO1556 c7421fb27747acdf88ca873d623be70d 363 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPO1556 c7421fb27747acdf88ca873d623be70d 363 PANTHER PTHR11496 1 363 3.0E-182 T 22-04-2016 YPO1556 c7421fb27747acdf88ca873d623be70d 363 PIRSF PIRSF000112 2 363 4.8E-114 T 22-04-2016 YPO1556 c7421fb27747acdf88ca873d623be70d 363 SUPERFAMILY SSF56796 10 357 1.83E-61 T 22-04-2016 YPO1556 c7421fb27747acdf88ca873d623be70d 363 PANTHER PTHR11496:SF55 1 363 3.0E-182 T 22-04-2016 YPO1556 c7421fb27747acdf88ca873d623be70d 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 350 2.7E-46 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YPO0809 04917e00c499a950b4b40f93adb4d103 318 Gene3D G3DSA:1.10.40.60 204 251 8.5E-9 T 22-04-2016 YPO0809 04917e00c499a950b4b40f93adb4d103 318 SUPERFAMILY SSF158544 203 255 1.2E-11 T 22-04-2016 YPO0809 04917e00c499a950b4b40f93adb4d103 318 PANTHER PTHR38831:SF1 1 318 8.5E-95 T 22-04-2016 YPO0809 04917e00c499a950b4b40f93adb4d103 318 Pfam PF03934 Type II secretion system (T2SS), protein K 36 299 3.1E-16 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 YPO0809 04917e00c499a950b4b40f93adb4d103 318 PIRSF PIRSF002786 1 318 8.5E-68 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 YPO0809 04917e00c499a950b4b40f93adb4d103 318 PANTHER PTHR38831 1 318 8.5E-95 T 22-04-2016 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 SUPERFAMILY SSF57783 9 47 1.09E-12 T 22-04-2016 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 60 96 1.2E-16 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 102 140 7.0E-15 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 11 47 2.9E-15 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 PANTHER PTHR11390:SF26 8 175 2.5E-93 T 22-04-2016 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 Gene3D G3DSA:3.30.65.10 100 135 8.7E-7 T 22-04-2016 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 Gene3D G3DSA:3.30.65.10 12 47 5.5E-14 T 22-04-2016 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 Gene3D G3DSA:3.30.65.10 58 94 1.3E-14 T 22-04-2016 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 SUPERFAMILY SSF57783 99 136 6.29E-5 T 22-04-2016 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 PANTHER PTHR11390 8 175 2.5E-93 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO0245 baaaad9e9708ee89fd26b4faaa44f52b 179 SUPERFAMILY SSF57783 58 96 2.21E-13 T 22-04-2016 YPO0918 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 38.145 T 22-04-2016 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 YPO0918 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 PANTHER PTHR30086 1 201 2.1E-98 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO0918 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 Pfam PF01810 LysE type translocator 14 202 3.5E-48 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO0918 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 7.5E-66 T 22-04-2016 IPR004777 L-lysine exporter/arginine exporter GO:0016021 YPO0918 2abcd8e31f7c9ea8ff60c61aa5ebc938 205 PANTHER PTHR30086:SF0 1 201 2.1E-98 T 22-04-2016 YPO0682 ff0d54e974b40329591ff9e8709c0a3f 353 Pfam PF01618 MotA/TolQ/ExbB proton channel family 209 317 1.2E-34 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YPO0682 ff0d54e974b40329591ff9e8709c0a3f 353 PANTHER PTHR30572 112 335 1.3E-87 T 22-04-2016 YPO0682 ff0d54e974b40329591ff9e8709c0a3f 353 PANTHER PTHR30572:SF11 112 335 1.3E-87 T 22-04-2016 YPO0682 ff0d54e974b40329591ff9e8709c0a3f 353 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 120 331 3.7E-96 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 YPO0313 58cbea32495370e49791f95ad08149a3 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 YPO0313 58cbea32495370e49791f95ad08149a3 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 6.3E-34 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 YPO0313 58cbea32495370e49791f95ad08149a3 123 Gene3D G3DSA:1.10.3830.10 4 121 1.8E-43 T 22-04-2016 YPO0313 58cbea32495370e49791f95ad08149a3 123 PANTHER PTHR34299 1 121 6.1E-41 T 22-04-2016 YPO0313 58cbea32495370e49791f95ad08149a3 123 PANTHER PTHR34299:SF1 1 121 6.1E-41 T 22-04-2016 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 5.8E-47 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 Pfam PF00293 NUDIX domain 5 134 4.8E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 SUPERFAMILY SSF55811 2 144 4.2E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 PANTHER PTHR22769 1 144 8.6E-69 T 22-04-2016 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 Gene3D G3DSA:3.90.79.10 1 143 9.9E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 PANTHER PTHR22769:SF28 1 144 8.6E-69 T 22-04-2016 YPO2054 d3a60a23694ae1421be1fe7d6ec68548 147 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPO2376 48aa84b174004720756f6e790136a17b 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 2.7E-19 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 YPO2376 48aa84b174004720756f6e790136a17b 79 PANTHER PTHR35175:SF1 1 79 5.5E-51 T 22-04-2016 YPO2376 48aa84b174004720756f6e790136a17b 79 PANTHER PTHR35175 1 79 5.5E-51 T 22-04-2016 YPO0372 0f71988613898b52bcfef47594a34422 313 Gene3D G3DSA:3.40.50.300 10 178 4.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0372 0f71988613898b52bcfef47594a34422 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 312 29.522 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 YPO0372 0f71988613898b52bcfef47594a34422 313 SUPERFAMILY SSF52540 13 155 1.19E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0372 0f71988613898b52bcfef47594a34422 313 Gene3D G3DSA:1.10.287.890 207 289 1.2E-32 T 22-04-2016 YPO0372 0f71988613898b52bcfef47594a34422 313 PANTHER PTHR11088 1 302 2.1E-125 T 22-04-2016 YPO0372 0f71988613898b52bcfef47594a34422 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 299 1.0E-119 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 YPO0372 0f71988613898b52bcfef47594a34422 313 Pfam PF01715 IPP transferase 46 291 5.7E-84 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 YPO2483 8f04f8db89407d521a8e889a8bd35cee 134 Pfam PF14106 Domain of unknown function (DUF4279) 13 128 7.9E-30 T 22-04-2016 IPR025459 Protein of unknown function DUF4279 YPO2327 1cc11187ef44896b944a874bbab9c0d3 61 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 15 61 9.0E-21 T 22-04-2016 YPO2327 1cc11187ef44896b944a874bbab9c0d3 61 Pfam PF13617 YnbE-like lipoprotein 7 59 5.5E-26 T 22-04-2016 IPR025985 YnbE-like lipoprotein YPO2771 1ad16b1a4c89ff512c3f156bd7f258ab 169 PANTHER PTHR36926 1 168 1.0E-86 T 22-04-2016 YPO2771 1ad16b1a4c89ff512c3f156bd7f258ab 169 PANTHER PTHR36926:SF1 1 168 1.0E-86 T 22-04-2016 YPO2771 1ad16b1a4c89ff512c3f156bd7f258ab 169 Pfam PF02674 Colicin V production protein 4 142 3.1E-36 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 YPO0850a 5e9ccd7e2bbd740b9690b1c3424aad9a 103 PANTHER PTHR30009:SF2 21 98 2.3E-24 T 22-04-2016 YPO0850a 5e9ccd7e2bbd740b9690b1c3424aad9a 103 PANTHER PTHR30009 21 98 2.3E-24 T 22-04-2016 YPO0850a 5e9ccd7e2bbd740b9690b1c3424aad9a 103 Gene3D G3DSA:3.30.1360.60 23 98 9.5E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO0850a 5e9ccd7e2bbd740b9690b1c3424aad9a 103 SUPERFAMILY SSF55604 27 98 6.02E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO0850a 5e9ccd7e2bbd740b9690b1c3424aad9a 103 Pfam PF00367 phosphotransferase system, EIIB 31 62 3.5E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPO0850a 5e9ccd7e2bbd740b9690b1c3424aad9a 103 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 23 86 5.2E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO0850a 5e9ccd7e2bbd740b9690b1c3424aad9a 103 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 40 57 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPO3408 7ec60e6fa491ad5ccc1dda8361dc453f 178 Gene3D G3DSA:3.40.50.2020 3 173 2.0E-79 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO3408 7ec60e6fa491ad5ccc1dda8361dc453f 178 Pfam PF00156 Phosphoribosyl transferase domain 12 160 4.1E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPO3408 7ec60e6fa491ad5ccc1dda8361dc453f 178 PANTHER PTHR22573:SF56 1 171 6.2E-82 T 22-04-2016 YPO3408 7ec60e6fa491ad5ccc1dda8361dc453f 178 SUPERFAMILY SSF53271 3 174 2.75E-55 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO3408 7ec60e6fa491ad5ccc1dda8361dc453f 178 PANTHER PTHR22573 1 171 6.2E-82 T 22-04-2016 YPO3408 7ec60e6fa491ad5ccc1dda8361dc453f 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 6.4E-74 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 YPO3572 5f5ddb2b6235c3518023b5c37c15cf47 207 Gene3D G3DSA:3.10.450.50 24 68 3.3E-16 T 22-04-2016 IPR032710 NTF2-like domain YPO3572 5f5ddb2b6235c3518023b5c37c15cf47 207 Gene3D G3DSA:3.10.450.50 112 170 3.3E-16 T 22-04-2016 IPR032710 NTF2-like domain YPO3572 5f5ddb2b6235c3518023b5c37c15cf47 207 Pfam PF05494 MlaC protein 31 195 1.1E-51 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPO3572 5f5ddb2b6235c3518023b5c37c15cf47 207 PANTHER PTHR36573 1 207 1.0E-80 T 22-04-2016 YPO3572 5f5ddb2b6235c3518023b5c37c15cf47 207 Gene3D G3DSA:1.10.10.640 69 109 1.2E-20 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical YPO3572 5f5ddb2b6235c3518023b5c37c15cf47 207 Gene3D G3DSA:1.10.10.640 171 201 1.2E-20 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical YPO3572 5f5ddb2b6235c3518023b5c37c15cf47 207 PIRSF PIRSF004649 1 207 2.2E-58 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPO2835 af17a977be6657f234b829bddec54554 749 SUPERFAMILY SSF82171 193 410 1.1E-10 T 22-04-2016 YPO2835 af17a977be6657f234b829bddec54554 749 SUPERFAMILY SSF161098 439 516 8.37E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2835 af17a977be6657f234b829bddec54554 749 Gene3D G3DSA:1.10.3720.10 531 744 1.0E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2835 af17a977be6657f234b829bddec54554 749 Gene3D G3DSA:1.10.3720.10 434 521 3.6E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2835 af17a977be6657f234b829bddec54554 749 Gene3D G3DSA:1.10.3720.10 39 61 3.6E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2835 af17a977be6657f234b829bddec54554 749 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 467 739 1.4E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2835 af17a977be6657f234b829bddec54554 749 Gene3D G3DSA:2.130.10.10 182 399 2.5E-4 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPO2835 af17a977be6657f234b829bddec54554 749 PANTHER PTHR30425:SF3 396 515 1.3E-160 T 22-04-2016 YPO2835 af17a977be6657f234b829bddec54554 749 PANTHER PTHR30425:SF3 580 746 1.3E-160 T 22-04-2016 YPO2835 af17a977be6657f234b829bddec54554 749 PANTHER PTHR30425:SF3 18 59 1.3E-160 T 22-04-2016 YPO2835 af17a977be6657f234b829bddec54554 749 SUPERFAMILY SSF161098 524 732 2.22E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2835 af17a977be6657f234b829bddec54554 749 PANTHER PTHR30425 396 515 1.3E-160 T 22-04-2016 YPO2835 af17a977be6657f234b829bddec54554 749 PANTHER PTHR30425 580 746 1.3E-160 T 22-04-2016 YPO2835 af17a977be6657f234b829bddec54554 749 PANTHER PTHR30425 18 59 1.3E-160 T 22-04-2016 YPO0964 db75dff45e17f86965d29e6564f2a411 91 Pfam PF12759 InsA C-terminal domain 43 88 2.1E-20 T 22-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPO0964 db75dff45e17f86965d29e6564f2a411 91 Pfam PF03811 InsA N-terminal domain 1 36 3.7E-9 T 22-04-2016 IPR003220 InsA N-terminal domain GO:0006313 YPO0964 db75dff45e17f86965d29e6564f2a411 91 PANTHER PTHR33293 1 90 6.0E-31 T 22-04-2016 YPO3795 876177cffefe6ad89d1975b901310a82 295 SUPERFAMILY SSF161098 56 283 2.88E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3795 876177cffefe6ad89d1975b901310a82 295 Gene3D G3DSA:1.10.3720.10 61 291 4.3E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3795 876177cffefe6ad89d1975b901310a82 295 PANTHER PTHR32243:SF13 5 293 1.1E-116 T 22-04-2016 YPO3795 876177cffefe6ad89d1975b901310a82 295 PANTHER PTHR32243 5 293 1.1E-116 T 22-04-2016 YPO3795 876177cffefe6ad89d1975b901310a82 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 293 4.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0486 794d6c880217e31ee86c274376a58450 160 Pfam PF00186 Dihydrofolate reductase 3 159 5.9E-59 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPO0486 794d6c880217e31ee86c274376a58450 160 PANTHER PTHR22778:SF16 1 160 1.3E-47 T 22-04-2016 YPO0486 794d6c880217e31ee86c274376a58450 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPO0486 794d6c880217e31ee86c274376a58450 160 PANTHER PTHR22778 1 160 1.3E-47 T 22-04-2016 YPO0486 794d6c880217e31ee86c274376a58450 160 SUPERFAMILY SSF53597 1 160 1.44E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YPO0486 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.1E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPO0486 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.1E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPO0486 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.1E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPO0486 794d6c880217e31ee86c274376a58450 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.1E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPO0486 794d6c880217e31ee86c274376a58450 160 PIRSF PIRSF000194 1 160 1.1E-58 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YPO0486 794d6c880217e31ee86c274376a58450 160 Gene3D G3DSA:3.40.430.10 1 160 2.8E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YPO0225 7cd6b047f5dcf98077b20479ca32345f 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 5.4E-44 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0225 7cd6b047f5dcf98077b20479ca32345f 117 SUPERFAMILY SSF53137 3 115 2.62E-53 T 22-04-2016 YPO0225 7cd6b047f5dcf98077b20479ca32345f 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.4E-46 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0225 7cd6b047f5dcf98077b20479ca32345f 117 PANTHER PTHR12899 1 117 3.8E-49 T 22-04-2016 YPO0225 7cd6b047f5dcf98077b20479ca32345f 117 Gene3D G3DSA:3.30.420.100 24 117 7.4E-37 T 22-04-2016 YPO0225 7cd6b047f5dcf98077b20479ca32345f 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.23 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3057 e0b70fbbe533d889cbf2d152e56dff6f 150 PANTHER PTHR38452:SF1 2 149 4.6E-74 T 22-04-2016 YPO3057 e0b70fbbe533d889cbf2d152e56dff6f 150 PANTHER PTHR38452 2 149 4.6E-74 T 22-04-2016 YPO3057 e0b70fbbe533d889cbf2d152e56dff6f 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 1.1E-47 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPO3057 e0b70fbbe533d889cbf2d152e56dff6f 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 132 1.0E-39 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPO3057 e0b70fbbe533d889cbf2d152e56dff6f 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.832 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPO3366 aacf8b0209fb2666861e3a669070cfad 302 SUPERFAMILY SSF52402 6 209 1.01E-74 T 22-04-2016 YPO3366 aacf8b0209fb2666861e3a669070cfad 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 2.9E-166 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPO3366 aacf8b0209fb2666861e3a669070cfad 302 Gene3D G3DSA:3.40.50.620 244 253 1.4E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3366 aacf8b0209fb2666861e3a669070cfad 302 Gene3D G3DSA:3.40.50.620 2 210 1.4E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3366 aacf8b0209fb2666861e3a669070cfad 302 PANTHER PTHR23293 245 302 1.7E-99 T 22-04-2016 YPO3366 aacf8b0209fb2666861e3a669070cfad 302 PANTHER PTHR23293 178 211 1.7E-99 T 22-04-2016 YPO3366 aacf8b0209fb2666861e3a669070cfad 302 PANTHER PTHR23293 1 158 1.7E-99 T 22-04-2016 YPO3366 aacf8b0209fb2666861e3a669070cfad 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.492 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPO3366 aacf8b0209fb2666861e3a669070cfad 302 PIRSF PIRSF002936 1 302 4.7E-155 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YPO3366 aacf8b0209fb2666861e3a669070cfad 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 2.0E-64 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 YPO1834 52695dc325caef3fc0145fcc007a8168 203 PANTHER PTHR10242 7 197 4.5E-56 T 22-04-2016 YPO1834 52695dc325caef3fc0145fcc007a8168 203 PANTHER PTHR10242:SF0 7 197 4.5E-56 T 22-04-2016 YPO1834 52695dc325caef3fc0145fcc007a8168 203 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 181 1.0E-12 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPO1834 52695dc325caef3fc0145fcc007a8168 203 SMART SM00478 49 201 5.5E-4 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPO1834 52695dc325caef3fc0145fcc007a8168 203 Gene3D G3DSA:1.10.1670.10 147 198 2.8E-6 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPO1834 52695dc325caef3fc0145fcc007a8168 203 SUPERFAMILY SSF48150 35 198 1.64E-35 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPO1834 52695dc325caef3fc0145fcc007a8168 203 Gene3D G3DSA:1.10.340.30 39 145 2.3E-26 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPO3581 57621bb28eac9587646224a967476fc1 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3581 57621bb28eac9587646224a967476fc1 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 2.1E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPO3581 57621bb28eac9587646224a967476fc1 241 SUPERFAMILY SSF52540 4 236 3.24E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3581 57621bb28eac9587646224a967476fc1 241 SMART SM00382 28 231 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3581 57621bb28eac9587646224a967476fc1 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 6.1E-123 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 YPO3581 57621bb28eac9587646224a967476fc1 241 Gene3D G3DSA:3.40.50.300 5 235 1.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3581 57621bb28eac9587646224a967476fc1 241 PANTHER PTHR24220:SF497 5 238 9.9E-151 T 22-04-2016 YPO3581 57621bb28eac9587646224a967476fc1 241 Pfam PF00005 ABC transporter 20 166 5.4E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3581 57621bb28eac9587646224a967476fc1 241 PANTHER PTHR24220 5 238 9.9E-151 T 22-04-2016 YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 Gene3D G3DSA:2.60.40.360 28 149 2.9E-42 T 22-04-2016 IPR008962 PapD-like YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 PANTHER PTHR30251:SF8 1 243 5.6E-141 T 22-04-2016 YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 SUPERFAMILY SSF49354 23 149 3.92E-42 T 22-04-2016 IPR008962 PapD-like YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 PANTHER PTHR30251 1 243 5.6E-141 T 22-04-2016 YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 PRINTS PR00969 Pili chaperone signature 131 146 2.37E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 PRINTS PR00969 Pili chaperone signature 29 38 2.37E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 PRINTS PR00969 Pili chaperone signature 106 123 2.37E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 PRINTS PR00969 Pili chaperone signature 170 185 2.37E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 PRINTS PR00969 Pili chaperone signature 78 99 2.37E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 237 9.0E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 Gene3D G3DSA:2.60.40.1070 153 237 4.8E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 149 8.2E-42 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO3878 d55f96eb9d83d2c2d13a828765436c44 243 SUPERFAMILY SSF49584 143 239 3.4E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.605.10 4 225 1.0E-23 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.50.1970 450 643 1.1E-63 T 22-04-2016 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:1.20.1090.10 644 864 5.7E-69 T 22-04-2016 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 PIRSF PIRSF000111 1 866 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 Pfam PF00171 Aldehyde dehydrogenase family 5 399 1.1E-27 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 PANTHER PTHR11496:SF79 360 867 0.0 T 22-04-2016 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 SUPERFAMILY SSF56796 451 864 4.58E-119 T 22-04-2016 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.309.10 309 404 1.0E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 Gene3D G3DSA:3.40.309.10 226 273 1.0E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 PANTHER PTHR11496 360 867 0.0 T 22-04-2016 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 SUPERFAMILY SSF53720 6 453 2.62E-83 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPO2180 b49b8ee4539c5f751d84c2f17dd11ace 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 6.0E-114 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YPO3006 57dc429420a6bb81b6b7665db663eb06 393 SUPERFAMILY SSF53383 1 390 3.13E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO3006 57dc429420a6bb81b6b7665db663eb06 393 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 389 2.4E-149 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 YPO3006 57dc429420a6bb81b6b7665db663eb06 393 Gene3D G3DSA:3.40.640.10 46 252 5.7E-51 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO3006 57dc429420a6bb81b6b7665db663eb06 393 Gene3D G3DSA:3.90.1150.10 253 390 2.4E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO3006 57dc429420a6bb81b6b7665db663eb06 393 PANTHER PTHR11751:SF422 4 386 3.5E-150 T 22-04-2016 YPO3006 57dc429420a6bb81b6b7665db663eb06 393 PANTHER PTHR11751 4 386 3.5E-150 T 22-04-2016 YPO3006 57dc429420a6bb81b6b7665db663eb06 393 Pfam PF00155 Aminotransferase class I and II 59 381 2.4E-34 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO2569a 1562cd50dcdf03e49959a589c74c462b 84 PANTHER PTHR33843:SF2 1 79 2.0E-20 T 22-04-2016 YPO2569a 1562cd50dcdf03e49959a589c74c462b 84 PANTHER PTHR33843 1 79 2.0E-20 T 22-04-2016 YPO2569a 1562cd50dcdf03e49959a589c74c462b 84 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 78 2.1E-11 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO2569a 1562cd50dcdf03e49959a589c74c462b 84 SUPERFAMILY SSF52794 1 79 8.37E-19 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO2569a 1562cd50dcdf03e49959a589c74c462b 84 Gene3D G3DSA:3.40.50.270 2 79 7.3E-11 T 22-04-2016 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 317 408 2.2E-21 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 Gene3D G3DSA:3.40.710.10 64 316 1.8E-96 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 PANTHER PTHR21581 1 432 0.0 T 22-04-2016 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 SUPERFAMILY SSF69189 317 410 2.94E-24 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 156 173 1.7E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 183 196 1.7E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 97 108 1.7E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 SMART SM00936 317 408 6.2E-31 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 65 297 1.5E-97 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 SUPERFAMILY SSF56601 40 317 4.92E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 Gene3D G3DSA:2.60.410.10 317 408 1.6E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO1320 32e451d68fdb81aaa9cddfcd197ac3b4 432 PANTHER PTHR21581:SF4 1 432 0.0 T 22-04-2016 YPO3347 34253700e7c7e67df11152182c02089d 429 PANTHER PTHR10283 1 427 3.2E-165 T 22-04-2016 YPO3347 34253700e7c7e67df11152182c02089d 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 2.5E-216 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3347 34253700e7c7e67df11152182c02089d 429 Pfam PF02040 Arsenical pump membrane protein 4 423 3.8E-160 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3347 34253700e7c7e67df11152182c02089d 429 PANTHER PTHR10283:SF21 1 427 3.2E-165 T 22-04-2016 YPO3347 34253700e7c7e67df11152182c02089d 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3347 34253700e7c7e67df11152182c02089d 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3347 34253700e7c7e67df11152182c02089d 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3347 34253700e7c7e67df11152182c02089d 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3347 34253700e7c7e67df11152182c02089d 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3347 34253700e7c7e67df11152182c02089d 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3347 34253700e7c7e67df11152182c02089d 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3347 34253700e7c7e67df11152182c02089d 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 6.8E-120 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YPO3588 c6b95fcc952efc516e953a35d3917148 311 Gene3D G3DSA:3.40.50.1370 7 144 2.7E-52 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 SUPERFAMILY SSF53671 4 306 2.26E-99 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO3588 c6b95fcc952efc516e953a35d3917148 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 Gene3D G3DSA:3.40.50.1370 145 292 4.4E-54 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 5.6E-28 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.709 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PANTHER PTHR11405 1 305 3.2E-145 T 22-04-2016 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 PANTHER PTHR11405:SF16 1 305 3.2E-145 T 22-04-2016 YPO3588 c6b95fcc952efc516e953a35d3917148 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.0E-45 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YPO3588 c6b95fcc952efc516e953a35d3917148 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 5.1E-119 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YPO1323 1c82ff8bf59269a6ca4186a388551976 223 Pfam PF01791 DeoC/LacD family aldolase 7 212 3.9E-18 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPO1323 1c82ff8bf59269a6ca4186a388551976 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 213 5.9E-83 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO1323 1c82ff8bf59269a6ca4186a388551976 223 Gene3D G3DSA:3.20.20.70 3 217 2.5E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1323 1c82ff8bf59269a6ca4186a388551976 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 217 34.796 T 22-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO1323 1c82ff8bf59269a6ca4186a388551976 223 PANTHER PTHR10889 6 217 1.8E-112 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO1323 1c82ff8bf59269a6ca4186a388551976 223 SMART SM01133 4 215 4.3E-95 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPO1323 1c82ff8bf59269a6ca4186a388551976 223 PIRSF PIRSF001357 1 222 3.5E-72 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO1323 1c82ff8bf59269a6ca4186a388551976 223 SUPERFAMILY SSF51569 3 216 3.04E-78 T 22-04-2016 YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 SUPERFAMILY SSF103088 56 167 2.35E-33 T 22-04-2016 IPR006665 OmpA-like domain YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 PANTHER PTHR30128 46 168 8.6E-64 T 22-04-2016 YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 168 3.5E-45 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 Pfam PF00691 OmpA family 67 162 8.8E-21 T 22-04-2016 IPR006665 OmpA-like domain YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 Gene3D G3DSA:3.30.1330.60 64 167 5.4E-33 T 22-04-2016 IPR006665 OmpA-like domain YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 PANTHER PTHR30128:SF18 46 168 8.6E-64 T 22-04-2016 YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 PRINTS PR01021 OMPA domain signature 98 113 4.1E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 PRINTS PR01021 OMPA domain signature 68 90 4.1E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO1125 480ea2b02e1f62da38df950aa5781c6f 168 PRINTS PR01021 OMPA domain signature 113 129 4.1E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO3600 bd87f8b12b9ccd5d0cccd542b8931d8c 265 Pfam PF02954 Bacterial regulatory protein, Fis family 221 261 2.4E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YPO3600 bd87f8b12b9ccd5d0cccd542b8931d8c 265 Gene3D G3DSA:1.10.10.60 210 261 2.6E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3600 bd87f8b12b9ccd5d0cccd542b8931d8c 265 SUPERFAMILY SSF46689 203 261 7.62E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1336 d0b95148753a095c12845a276dd612a0 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site YPO1336 d0b95148753a095c12845a276dd612a0 376 PANTHER PTHR11061:SF36 8 376 3.5E-262 T 22-04-2016 YPO1336 d0b95148753a095c12845a276dd612a0 376 SUPERFAMILY SSF53335 3 372 2.45E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1336 d0b95148753a095c12845a276dd612a0 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 207 373 3.7E-18 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YPO1336 d0b95148753a095c12845a276dd612a0 376 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 81.238 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 YPO1336 d0b95148753a095c12845a276dd612a0 376 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 367 4.6E-57 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 YPO1336 d0b95148753a095c12845a276dd612a0 376 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site YPO1336 d0b95148753a095c12845a276dd612a0 376 PANTHER PTHR11061 8 376 3.5E-262 T 22-04-2016 YPO1336 d0b95148753a095c12845a276dd612a0 376 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 5.3E-222 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 YPO1336 d0b95148753a095c12845a276dd612a0 376 Gene3D G3DSA:3.40.50.150 181 373 1.4E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1364 8822d2a366b25575af31d1284917f0ac 371 SUPERFAMILY SSF111369 53 299 1.31E-29 T 22-04-2016 YPO1364 8822d2a366b25575af31d1284917f0ac 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 364 9.2E-60 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO1364 8822d2a366b25575af31d1284917f0ac 371 PANTHER PTHR30572 6 365 3.4E-253 T 22-04-2016 YPO1364 8822d2a366b25575af31d1284917f0ac 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 295 1.9E-22 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO1364 8822d2a366b25575af31d1284917f0ac 371 Gene3D G3DSA:2.40.50.100 184 215 1.9E-15 T 22-04-2016 YPO1364 8822d2a366b25575af31d1284917f0ac 371 Gene3D G3DSA:2.40.50.100 62 95 1.9E-15 T 22-04-2016 YPO1364 8822d2a366b25575af31d1284917f0ac 371 PANTHER PTHR30572:SF10 6 365 3.4E-253 T 22-04-2016 IPR030190 Macrolide export protein MacA GO:0006810|GO:0019898|GO:0022891 YPO1636 b532ebe15d39b63299af314eef52c4cb 456 Gene3D G3DSA:1.20.200.10 120 389 1.7E-87 T 22-04-2016 YPO1636 b532ebe15d39b63299af314eef52c4cb 456 PANTHER PTHR11444:SF17 4 455 0.0 T 22-04-2016 YPO1636 b532ebe15d39b63299af314eef52c4cb 456 Gene3D G3DSA:1.10.40.30 390 445 3.2E-34 T 22-04-2016 YPO1636 b532ebe15d39b63299af314eef52c4cb 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.6E-151 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 YPO1636 b532ebe15d39b63299af314eef52c4cb 456 PANTHER PTHR11444 4 455 0.0 T 22-04-2016 IPR000362 Fumarate lyase family YPO1636 b532ebe15d39b63299af314eef52c4cb 456 Pfam PF00206 Lyase 14 312 9.3E-78 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YPO1636 b532ebe15d39b63299af314eef52c4cb 456 SUPERFAMILY SSF48557 10 454 1.73E-105 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YPO1636 b532ebe15d39b63299af314eef52c4cb 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YPO1636 b532ebe15d39b63299af314eef52c4cb 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YPO1636 b532ebe15d39b63299af314eef52c4cb 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YPO1636 b532ebe15d39b63299af314eef52c4cb 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YPO1636 b532ebe15d39b63299af314eef52c4cb 456 Gene3D G3DSA:1.10.275.10 1 119 6.9E-51 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YPO1636 b532ebe15d39b63299af314eef52c4cb 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 5.3E-53 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 YPO1636 b532ebe15d39b63299af314eef52c4cb 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YPO3956 c8ed296debedd4ec0848a0b133f0b975 231 PANTHER PTHR13903:SF7 1 231 1.5E-128 T 22-04-2016 YPO3956 c8ed296debedd4ec0848a0b133f0b975 231 Gene3D G3DSA:2.60.120.10 5 231 7.6E-71 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO3956 c8ed296debedd4ec0848a0b133f0b975 231 SUPERFAMILY SSF51182 1 231 1.4E-79 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO3956 c8ed296debedd4ec0848a0b133f0b975 231 PANTHER PTHR13903 1 231 1.5E-128 T 22-04-2016 IPR012093 Pirin YPO3956 c8ed296debedd4ec0848a0b133f0b975 231 Pfam PF02678 Pirin 11 119 1.9E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain YPO3956 c8ed296debedd4ec0848a0b133f0b975 231 PIRSF PIRSF006232 1 231 3.2E-55 T 22-04-2016 IPR012093 Pirin YPO0713 a2e4284e90fcd117c08f618dbd5b85b6 126 Pfam PF02049 Flagellar hook-basal body complex protein FliE 50 125 2.5E-21 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO0713 a2e4284e90fcd117c08f618dbd5b85b6 126 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 52 124 2.8E-13 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO0713 a2e4284e90fcd117c08f618dbd5b85b6 126 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 24 126 13.032 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO0713 a2e4284e90fcd117c08f618dbd5b85b6 126 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 56 72 2.9E-8 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO0713 a2e4284e90fcd117c08f618dbd5b85b6 126 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 106 2.9E-8 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO0713 a2e4284e90fcd117c08f618dbd5b85b6 126 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 111 124 2.9E-8 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO1788 d10e148b86965c4c69cd2422054acef7 108 Gene3D G3DSA:1.10.1200.10 3 60 2.4E-4 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YPO1788 d10e148b86965c4c69cd2422054acef7 108 Pfam PF07377 Protein of unknown function (DUF1493) 1 108 9.2E-44 T 22-04-2016 IPR010862 Protein of unknown function DUF1493 YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 Gene3D G3DSA:3.40.190.10 118 214 1.8E-29 T 22-04-2016 YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 Gene3D G3DSA:3.40.190.10 217 259 8.0E-43 T 22-04-2016 YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 Gene3D G3DSA:3.40.190.10 28 115 8.0E-43 T 22-04-2016 YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 256 8.5E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 SMART SM00062 29 258 1.6E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 PANTHER PTHR18966:SF237 26 255 2.9E-162 T 22-04-2016 YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 PANTHER PTHR18966 26 255 2.9E-162 T 22-04-2016 YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 52 65 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 10 255 1.3E-91 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 YPO2774 ed3e3e6d203f491bf497a0571b88c655 262 SUPERFAMILY SSF53850 28 259 2.02E-63 T 22-04-2016 YPO3073 9c1992e8c77ba918b439142267e97988 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.1E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPO3073 9c1992e8c77ba918b439142267e97988 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.1E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPO3073 9c1992e8c77ba918b439142267e97988 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.1E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPO3073 9c1992e8c77ba918b439142267e97988 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.1E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPO3073 9c1992e8c77ba918b439142267e97988 461 SMART SM00840 341 402 1.9E-27 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YPO3073 9c1992e8c77ba918b439142267e97988 461 SUPERFAMILY SSF47323 316 460 1.44E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO3073 9c1992e8c77ba918b439142267e97988 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.2E-192 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 YPO3073 9c1992e8c77ba918b439142267e97988 461 PANTHER PTHR10890 1 460 2.5E-263 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YPO3073 9c1992e8c77ba918b439142267e97988 461 Gene3D G3DSA:1.20.120.640 306 392 1.1E-28 T 22-04-2016 YPO3073 9c1992e8c77ba918b439142267e97988 461 Pfam PF09190 DALR domain 341 402 1.9E-24 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YPO3073 9c1992e8c77ba918b439142267e97988 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 8.2E-142 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 YPO3073 9c1992e8c77ba918b439142267e97988 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.261 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 YPO3073 9c1992e8c77ba918b439142267e97988 461 SUPERFAMILY SSF52374 1 313 1.23E-101 T 22-04-2016 YPO3073 9c1992e8c77ba918b439142267e97988 461 Gene3D G3DSA:3.40.50.620 19 305 1.3E-111 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0341 93ea560bc63585b895ee6eca404dd2d5 191 SUPERFAMILY SSF48498 74 157 6.67E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO0341 93ea560bc63585b895ee6eca404dd2d5 191 PANTHER PTHR30055 3 191 1.4E-36 T 22-04-2016 YPO0341 93ea560bc63585b895ee6eca404dd2d5 191 PANTHER PTHR30055:SF92 3 191 1.4E-36 T 22-04-2016 YPO0341 93ea560bc63585b895ee6eca404dd2d5 191 SUPERFAMILY SSF46689 3 66 8.72E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0341 93ea560bc63585b895ee6eca404dd2d5 191 Gene3D G3DSA:1.10.357.10 3 180 2.1E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPO0341 93ea560bc63585b895ee6eca404dd2d5 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 49 2.9E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO1377 9ff00a98206223fc4824a56760b99352 202 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 202 1.3E-97 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 YPO1377 9ff00a98206223fc4824a56760b99352 202 PANTHER PTHR35869 1 202 4.3E-64 T 22-04-2016 YPO1377 9ff00a98206223fc4824a56760b99352 202 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 201 32.008 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 YPO1377 9ff00a98206223fc4824a56760b99352 202 Gene3D G3DSA:2.50.20.10 23 202 1.1E-59 T 22-04-2016 YPO1377 9ff00a98206223fc4824a56760b99352 202 SUPERFAMILY SSF89392 23 202 9.02E-56 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPO1377 9ff00a98206223fc4824a56760b99352 202 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 32 191 8.2E-58 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PANTHER PTHR10906 18 443 5.9E-236 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Gene3D G3DSA:1.10.3370.10 17 437 1.8E-167 T 22-04-2016 IPR023201 SecY subunit domain YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 22-04-2016 IPR030659 SecY conserved site YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.3E-98 T 22-04-2016 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.3E-98 T 22-04-2016 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.3E-98 T 22-04-2016 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.3E-98 T 22-04-2016 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.3E-98 T 22-04-2016 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.3E-98 T 22-04-2016 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.3E-98 T 22-04-2016 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.3E-98 T 22-04-2016 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.3E-98 T 22-04-2016 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.984 T 22-04-2016 IPR026593 Protein translocase subunit SecY YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 SUPERFAMILY SSF103491 16 424 6.28E-134 T 22-04-2016 IPR023201 SecY subunit domain YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.9E-141 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 22-04-2016 IPR030659 SecY conserved site YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Pfam PF00344 SecY translocase 76 417 9.1E-120 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PIRSF PIRSF004557 11 441 1.4E-123 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YPO0229 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PANTHER PTHR10906:SF2 18 443 5.9E-236 T 22-04-2016 YPO0126 f0683d64d305c20720001984c16e6ad6 698 Pfam PF02446 4-alpha-glucanotransferase 151 669 1.1E-131 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 YPO0126 f0683d64d305c20720001984c16e6ad6 698 PANTHER PTHR32438:SF5 62 566 5.3E-279 T 22-04-2016 YPO0126 f0683d64d305c20720001984c16e6ad6 698 PANTHER PTHR32438:SF5 585 693 5.3E-279 T 22-04-2016 YPO0126 f0683d64d305c20720001984c16e6ad6 698 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 103 690 2.5E-243 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 YPO0126 f0683d64d305c20720001984c16e6ad6 698 PANTHER PTHR32438 62 566 5.3E-279 T 22-04-2016 YPO0126 f0683d64d305c20720001984c16e6ad6 698 PANTHER PTHR32438 585 693 5.3E-279 T 22-04-2016 YPO0126 f0683d64d305c20720001984c16e6ad6 698 Gene3D G3DSA:3.20.20.80 617 691 2.0E-165 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO0126 f0683d64d305c20720001984c16e6ad6 698 Gene3D G3DSA:3.20.20.80 143 578 2.0E-165 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO0126 f0683d64d305c20720001984c16e6ad6 698 SUPERFAMILY SSF51445 613 687 1.8E-148 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO0126 f0683d64d305c20720001984c16e6ad6 698 SUPERFAMILY SSF51445 145 575 1.8E-148 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO0858 e42db32b30c7937a3a18279f50baec09 502 SUPERFAMILY SSF52540 279 492 1.49E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0858 e42db32b30c7937a3a18279f50baec09 502 Pfam PF00005 ABC transporter 280 433 2.2E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0858 e42db32b30c7937a3a18279f50baec09 502 Pfam PF00005 ABC transporter 30 180 1.8E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0858 e42db32b30c7937a3a18279f50baec09 502 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0858 e42db32b30c7937a3a18279f50baec09 502 SMART SM00382 39 228 3.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0858 e42db32b30c7937a3a18279f50baec09 502 SMART SM00382 288 482 1.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0858 e42db32b30c7937a3a18279f50baec09 502 SUPERFAMILY SSF52540 13 240 2.28E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0858 e42db32b30c7937a3a18279f50baec09 502 Gene3D G3DSA:3.40.50.300 12 243 1.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0858 e42db32b30c7937a3a18279f50baec09 502 Gene3D G3DSA:3.40.50.300 279 497 9.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0858 e42db32b30c7937a3a18279f50baec09 502 PANTHER PTHR24220 16 388 1.5E-130 T 22-04-2016 YPO0858 e42db32b30c7937a3a18279f50baec09 502 PANTHER PTHR24220:SF416 16 388 1.5E-130 T 22-04-2016 YPO2535 365ecf4ae00f358d86e0ebbc398d6855 443 SUPERFAMILY SSF103473 8 420 6.28E-84 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2535 365ecf4ae00f358d86e0ebbc398d6855 443 Gene3D G3DSA:1.20.1250.20 232 418 2.6E-22 T 22-04-2016 YPO2535 365ecf4ae00f358d86e0ebbc398d6855 443 Gene3D G3DSA:1.20.1250.20 16 208 4.3E-44 T 22-04-2016 YPO2535 365ecf4ae00f358d86e0ebbc398d6855 443 Pfam PF07690 Major Facilitator Superfamily 22 384 1.1E-52 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO2535 365ecf4ae00f358d86e0ebbc398d6855 443 PANTHER PTHR11662:SF283 2 442 2.8E-229 T 22-04-2016 YPO2535 365ecf4ae00f358d86e0ebbc398d6855 443 PANTHER PTHR11662 2 442 2.8E-229 T 22-04-2016 YPO0627 4b308344c0613b413ff714e6eb49d342 126 PANTHER PTHR11803 1 124 8.4E-103 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO0627 4b308344c0613b413ff714e6eb49d342 126 Gene3D G3DSA:3.30.1330.40 2 124 9.5E-47 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO0627 4b308344c0613b413ff714e6eb49d342 126 Pfam PF01042 Endoribonuclease L-PSP 7 124 1.6E-44 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO0627 4b308344c0613b413ff714e6eb49d342 126 PANTHER PTHR11803:SF20 1 124 8.4E-103 T 22-04-2016 YPO0627 4b308344c0613b413ff714e6eb49d342 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 4.5E-50 T 22-04-2016 IPR006056 RidA family YPO0627 4b308344c0613b413ff714e6eb49d342 126 SUPERFAMILY SSF55298 2 125 1.37E-44 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO0627 4b308344c0613b413ff714e6eb49d342 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 22-04-2016 IPR019897 RidA, conserved site YPO3169 7cbc050c8e437f125acecfed57b36059 456 Gene3D G3DSA:1.20.1250.20 213 395 1.1E-23 T 22-04-2016 YPO3169 7cbc050c8e437f125acecfed57b36059 456 Gene3D G3DSA:1.20.1250.20 15 196 2.6E-34 T 22-04-2016 YPO3169 7cbc050c8e437f125acecfed57b36059 456 SUPERFAMILY SSF103473 3 392 4.19E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3169 7cbc050c8e437f125acecfed57b36059 456 Gene3D G3DSA:3.30.70.100 412 456 8.3E-4 T 22-04-2016 YPO3169 7cbc050c8e437f125acecfed57b36059 456 PANTHER PTHR23510:SF6 1 402 1.5E-272 T 22-04-2016 YPO3169 7cbc050c8e437f125acecfed57b36059 456 PANTHER PTHR23510 1 402 1.5E-272 T 22-04-2016 YPO3169 7cbc050c8e437f125acecfed57b36059 456 Pfam PF07690 Major Facilitator Superfamily 22 348 1.1E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1940 0b6984d117f17763a181aa2688815128 546 SUPERFAMILY SSF103473 16 200 3.27E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1940 0b6984d117f17763a181aa2688815128 546 SUPERFAMILY SSF103473 268 439 3.27E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1940 0b6984d117f17763a181aa2688815128 546 Pfam PF07690 Major Facilitator Superfamily 23 430 2.3E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1940 0b6984d117f17763a181aa2688815128 546 PANTHER PTHR23501:SF88 1 546 5.3E-234 T 22-04-2016 YPO1940 0b6984d117f17763a181aa2688815128 546 PANTHER PTHR23501 1 546 5.3E-234 T 22-04-2016 YPO1940 0b6984d117f17763a181aa2688815128 546 Gene3D G3DSA:1.20.1250.20 21 198 2.8E-20 T 22-04-2016 YPO1940 0b6984d117f17763a181aa2688815128 546 Gene3D G3DSA:1.20.1250.20 290 441 5.6E-17 T 22-04-2016 YPO1940 0b6984d117f17763a181aa2688815128 546 Gene3D G3DSA:1.20.1250.20 505 530 5.6E-17 T 22-04-2016 YPO1258 d862159f0d62f5c8c296fa0a0660bda5 226 PANTHER PTHR34319 2 226 1.3E-166 T 22-04-2016 YPO1258 d862159f0d62f5c8c296fa0a0660bda5 226 PANTHER PTHR34319:SF1 2 226 1.3E-166 T 22-04-2016 YPO1258 d862159f0d62f5c8c296fa0a0660bda5 226 Pfam PF12639 DNase/tRNase domain of colicin-like bacteriocin 122 193 4.5E-7 T 22-04-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 YPO1258 d862159f0d62f5c8c296fa0a0660bda5 226 SUPERFAMILY SSF54060 89 192 1.0E-24 T 22-04-2016 YPO0166 917b00d685bda5a160e98a8a4f941192 437 Pfam PF02056 Family 4 glycosyl hydrolase 5 186 4.8E-55 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPO0166 917b00d685bda5a160e98a8a4f941192 437 PANTHER PTHR32092 1 437 5.1E-246 T 22-04-2016 YPO0166 917b00d685bda5a160e98a8a4f941192 437 PANTHER PTHR32092:SF5 1 437 5.1E-246 T 22-04-2016 YPO0166 917b00d685bda5a160e98a8a4f941192 437 Gene3D G3DSA:3.40.50.720 2 169 1.6E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0166 917b00d685bda5a160e98a8a4f941192 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 2.3E-48 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 YPO0166 917b00d685bda5a160e98a8a4f941192 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 22-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 YPO0166 917b00d685bda5a160e98a8a4f941192 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPO0166 917b00d685bda5a160e98a8a4f941192 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPO0166 917b00d685bda5a160e98a8a4f941192 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPO0166 917b00d685bda5a160e98a8a4f941192 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPO0166 917b00d685bda5a160e98a8a4f941192 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPO0166 917b00d685bda5a160e98a8a4f941192 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPO0166 917b00d685bda5a160e98a8a4f941192 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YPO0166 917b00d685bda5a160e98a8a4f941192 437 Gene3D G3DSA:3.90.110.10 170 434 4.5E-97 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YPO0166 917b00d685bda5a160e98a8a4f941192 437 SUPERFAMILY SSF56327 172 435 1.22E-90 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YPO0166 917b00d685bda5a160e98a8a4f941192 437 SUPERFAMILY SSF51735 3 169 1.15E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1466 ef72e535226537eb14fea01dee1fc4d0 516 PANTHER PTHR35565:SF1 3 46 0.0 T 22-04-2016 YPO1466 ef72e535226537eb14fea01dee1fc4d0 516 PANTHER PTHR35565:SF1 64 516 0.0 T 22-04-2016 YPO1466 ef72e535226537eb14fea01dee1fc4d0 516 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 50 512 1.1E-203 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO1466 ef72e535226537eb14fea01dee1fc4d0 516 PANTHER PTHR35565 3 46 0.0 T 22-04-2016 YPO1466 ef72e535226537eb14fea01dee1fc4d0 516 PANTHER PTHR35565 64 516 0.0 T 22-04-2016 YPO1466 ef72e535226537eb14fea01dee1fc4d0 516 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 93 512 1.5E-170 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO1951 093cba43a455b908406e058cbf61dd18 822 SUPERFAMILY SSF48452 104 221 2.28E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1951 093cba43a455b908406e058cbf61dd18 822 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 17 822 0.0 T 22-04-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 YPO1951 093cba43a455b908406e058cbf61dd18 822 Gene3D G3DSA:1.25.40.10 414 501 1.9E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1951 093cba43a455b908406e058cbf61dd18 822 Gene3D G3DSA:1.25.40.10 275 298 1.9E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1951 093cba43a455b908406e058cbf61dd18 822 Gene3D G3DSA:1.25.40.10 102 209 1.9E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3949 22b02cdb24a46709ac3182db1772debe 367 PANTHER PTHR10174 85 179 1.6E-161 T 22-04-2016 YPO3949 22b02cdb24a46709ac3182db1772debe 367 PANTHER PTHR10174 201 367 1.6E-161 T 22-04-2016 YPO3949 22b02cdb24a46709ac3182db1772debe 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.846 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO3949 22b02cdb24a46709ac3182db1772debe 367 Gene3D G3DSA:3.40.50.720 1 142 9.0E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3949 22b02cdb24a46709ac3182db1772debe 367 PANTHER PTHR10174:SF116 85 179 1.6E-161 T 22-04-2016 YPO3949 22b02cdb24a46709ac3182db1772debe 367 PANTHER PTHR10174:SF116 201 367 1.6E-161 T 22-04-2016 YPO3949 22b02cdb24a46709ac3182db1772debe 367 SUPERFAMILY SSF51735 1 147 2.76E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3949 22b02cdb24a46709ac3182db1772debe 367 SMART SM00859 3 122 2.9E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPO3949 22b02cdb24a46709ac3182db1772debe 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 5.5E-23 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPO3949 22b02cdb24a46709ac3182db1772debe 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 6.9E-212 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO3949 22b02cdb24a46709ac3182db1772debe 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO3949 22b02cdb24a46709ac3182db1772debe 367 SUPERFAMILY SSF55347 134 354 4.05E-79 T 22-04-2016 YPO3949 22b02cdb24a46709ac3182db1772debe 367 Gene3D G3DSA:3.30.360.10 143 350 6.4E-77 T 22-04-2016 YPO3949 22b02cdb24a46709ac3182db1772debe 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 6.8E-58 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO3949 22b02cdb24a46709ac3182db1772debe 367 PIRSF PIRSF000148 1 367 2.1E-69 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO1594 02d5baf5e72a1fe7e555f99265275a0d 174 PANTHER PTHR38099 2 173 3.0E-86 T 22-04-2016 YPO1594 02d5baf5e72a1fe7e555f99265275a0d 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 1.5E-15 T 22-04-2016 IPR003772 Protein of unknown function DUF177 YPO3545 4da070f5da2512349adb1d8e876a361e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3545 4da070f5da2512349adb1d8e876a361e 297 Gene3D G3DSA:3.40.190.10 182 264 9.2E-10 T 22-04-2016 YPO3545 4da070f5da2512349adb1d8e876a361e 297 Pfam PF03466 LysR substrate binding domain 120 280 3.4E-18 T 22-04-2016 IPR005119 LysR, substrate-binding YPO3545 4da070f5da2512349adb1d8e876a361e 297 Gene3D G3DSA:1.10.10.10 7 92 3.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3545 4da070f5da2512349adb1d8e876a361e 297 PANTHER PTHR30126 6 297 3.0E-217 T 22-04-2016 YPO3545 4da070f5da2512349adb1d8e876a361e 297 SUPERFAMILY SSF46785 8 91 1.69E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3545 4da070f5da2512349adb1d8e876a361e 297 SUPERFAMILY SSF53850 93 288 6.64E-23 T 22-04-2016 YPO3545 4da070f5da2512349adb1d8e876a361e 297 PANTHER PTHR30126:SF22 6 297 3.0E-217 T 22-04-2016 YPO3545 4da070f5da2512349adb1d8e876a361e 297 Gene3D G3DSA:3.40.190.10 125 181 2.0E-4 T 22-04-2016 YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 62 82 3.0E-10 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 257 278 3.0E-10 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 291 315 3.0E-10 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 SUPERFAMILY SSF51230 46 87 7.32E-5 T 22-04-2016 IPR011053 Single hybrid motif YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 PANTHER PTHR30386:SF8 11 411 3.5E-136 T 22-04-2016 YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 PANTHER PTHR30386 11 411 3.5E-136 T 22-04-2016 YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 ProSitePatterns PS00543 HlyD family secretion proteins signature. 373 395 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 Gene3D G3DSA:2.40.50.100 243 277 1.8E-13 T 22-04-2016 YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 Gene3D G3DSA:2.40.50.100 53 84 1.8E-13 T 22-04-2016 YPO0099 c9eea8ef9aa1cebe5ea5d6373ced287e 411 Pfam PF13437 HlyD family secretion protein 246 339 1.2E-11 T 22-04-2016 YPO1597 27fdad0d7df19c4cb19e0bbdc93faced 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 2.4E-35 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPO1597 27fdad0d7df19c4cb19e0bbdc93faced 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 69.865 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPO1597 27fdad0d7df19c4cb19e0bbdc93faced 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 5.0E-145 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPO1597 27fdad0d7df19c4cb19e0bbdc93faced 316 SUPERFAMILY SSF53901 4 316 1.55E-69 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1597 27fdad0d7df19c4cb19e0bbdc93faced 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 5.9E-31 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YPO1597 27fdad0d7df19c4cb19e0bbdc93faced 316 PANTHER PTHR18919 26 316 1.1E-127 T 22-04-2016 YPO1597 27fdad0d7df19c4cb19e0bbdc93faced 316 Gene3D G3DSA:3.40.47.10 1 160 6.8E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1597 27fdad0d7df19c4cb19e0bbdc93faced 316 Gene3D G3DSA:3.40.47.10 161 315 9.0E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1597 27fdad0d7df19c4cb19e0bbdc93faced 316 PANTHER PTHR18919:SF109 26 316 1.1E-127 T 22-04-2016 YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 PANTHER PTHR30349:SF17 3 300 3.7E-171 T 22-04-2016 YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 298 36.496 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 SUPERFAMILY SSF56349 113 296 8.24E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 3.1E-22 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Gene3D G3DSA:1.10.443.10 119 291 7.9E-53 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Gene3D G3DSA:1.10.150.130 10 105 4.2E-24 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 SUPERFAMILY SSF47823 10 102 5.1E-11 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 Pfam PF00589 Phage integrase family 117 284 6.6E-52 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 300 1.2E-107 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 YPO3843 e9ab5dd7bce88b7a0ddf37f453dcdbba 303 PANTHER PTHR30349 3 300 3.7E-171 T 22-04-2016 YPO1596 92fc272180de3d740530a42229f5cb97 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 142.095 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 YPO1596 92fc272180de3d740530a42229f5cb97 344 SUPERFAMILY SSF53659 5 340 1.07E-102 T 22-04-2016 YPO1596 92fc272180de3d740530a42229f5cb97 344 PIRSF PIRSF002465 2 344 6.9E-125 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 YPO1596 92fc272180de3d740530a42229f5cb97 344 Pfam PF02504 Fatty acid synthesis protein 5 331 2.8E-117 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 YPO1596 92fc272180de3d740530a42229f5cb97 344 PANTHER PTHR30100:SF1 2 344 4.0E-146 T 22-04-2016 YPO1596 92fc272180de3d740530a42229f5cb97 344 Gene3D G3DSA:3.40.718.10 4 339 3.1E-136 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO1596 92fc272180de3d740530a42229f5cb97 344 PANTHER PTHR30100 2 344 4.0E-146 T 22-04-2016 YPO1596 92fc272180de3d740530a42229f5cb97 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 342 5.8E-134 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 YPO3343 fc46ed3cc4815c9df8fea8d5b8852b36 256 PANTHER PTHR18966:SF216 10 240 1.6E-86 T 22-04-2016 YPO3343 fc46ed3cc4815c9df8fea8d5b8852b36 256 SUPERFAMILY SSF53850 3 245 2.57E-45 T 22-04-2016 YPO3343 fc46ed3cc4815c9df8fea8d5b8852b36 256 SMART SM00062 34 256 1.9E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO3343 fc46ed3cc4815c9df8fea8d5b8852b36 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 241 1.5E-40 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO3343 fc46ed3cc4815c9df8fea8d5b8852b36 256 Gene3D G3DSA:3.40.190.10 152 207 5.4E-6 T 22-04-2016 YPO3343 fc46ed3cc4815c9df8fea8d5b8852b36 256 Gene3D G3DSA:3.40.190.10 15 151 8.2E-32 T 22-04-2016 YPO3343 fc46ed3cc4815c9df8fea8d5b8852b36 256 PANTHER PTHR18966 10 240 1.6E-86 T 22-04-2016 YPO3140 7ef42871530c7e64b6a097ca0a486947 173 PANTHER PTHR38013 5 172 2.7E-56 T 22-04-2016 YPO3140 7ef42871530c7e64b6a097ca0a486947 173 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 49 152 2.8E-41 T 22-04-2016 YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 168 7.6E-8 T 22-04-2016 YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 110 127 7.6E-8 T 22-04-2016 YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 128 147 7.6E-8 T 22-04-2016 YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 Gene3D G3DSA:3.30.1330.60 51 166 2.2E-34 T 22-04-2016 IPR006665 OmpA-like domain YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PANTHER PTHR30128:SF12 1 165 4.6E-117 T 22-04-2016 YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01021 OMPA domain signature 65 87 3.8E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01021 OMPA domain signature 110 126 3.8E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PRINTS PR01021 OMPA domain signature 95 110 3.8E-11 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 SUPERFAMILY SSF103088 51 165 2.09E-32 T 22-04-2016 IPR006665 OmpA-like domain YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 PANTHER PTHR30128 1 165 4.6E-117 T 22-04-2016 YPO0448 dbd3e98fda5f49fe2712b65fc25fc1ba 168 Pfam PF00691 OmpA family 64 159 4.5E-18 T 22-04-2016 IPR006665 OmpA-like domain YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 Pfam PF00765 Autoinducer synthase 12 192 2.9E-82 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 ProSitePatterns PS00949 Autoinducer synthase family signature. 27 52 - T 22-04-2016 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 PANTHER PTHR39322:SF1 6 218 3.9E-126 T 22-04-2016 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 PRINTS PR01549 Autoinducer synthesis protein signature 23 42 3.5E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 PRINTS PR01549 Autoinducer synthesis protein signature 66 84 3.5E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 PRINTS PR01549 Autoinducer synthesis protein signature 98 110 3.5E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 PRINTS PR01549 Autoinducer synthesis protein signature 167 184 3.5E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 PRINTS PR01549 Autoinducer synthesis protein signature 43 65 3.5E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 PRINTS PR01549 Autoinducer synthesis protein signature 145 166 3.5E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 PRINTS PR01549 Autoinducer synthesis protein signature 123 144 3.5E-63 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 PANTHER PTHR39322 6 218 3.9E-126 T 22-04-2016 YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 SUPERFAMILY SSF55729 5 213 2.44E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2456 ba616b46c320cd6b51a0f3fe340a2684 218 Gene3D G3DSA:3.40.630.30 5 214 1.3E-58 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2239 7dc742e021525d1baa49877e6b771802 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.9E-21 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPO2239 7dc742e021525d1baa49877e6b771802 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YPO2239 7dc742e021525d1baa49877e6b771802 213 PANTHER PTHR10359 1 212 1.1E-91 T 22-04-2016 YPO2239 7dc742e021525d1baa49877e6b771802 213 Gene3D G3DSA:1.10.1670.10 123 208 6.7E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPO2239 7dc742e021525d1baa49877e6b771802 213 Gene3D G3DSA:1.10.340.30 23 122 6.6E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPO2239 7dc742e021525d1baa49877e6b771802 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 YPO2239 7dc742e021525d1baa49877e6b771802 213 SMART SM00478 38 185 1.4E-54 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YPO2239 7dc742e021525d1baa49877e6b771802 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.265 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 YPO2239 7dc742e021525d1baa49877e6b771802 213 PIRSF PIRSF001435 1 211 5.0E-52 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 YPO2239 7dc742e021525d1baa49877e6b771802 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.4E-88 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 YPO2239 7dc742e021525d1baa49877e6b771802 213 SMART SM00525 186 206 4.4E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YPO2239 7dc742e021525d1baa49877e6b771802 213 SUPERFAMILY SSF48150 2 207 8.01E-74 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YPO2239 7dc742e021525d1baa49877e6b771802 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.9E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 YPO2239 7dc742e021525d1baa49877e6b771802 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 PANTHER PTHR32093:SF41 1 552 8.1E-131 T 22-04-2016 YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 Pfam PF13332 Haemagluttinin repeat 2366 2467 2.7E-7 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 Pfam PF13332 Haemagluttinin repeat 2513 2676 4.8E-42 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 Pfam PF13332 Haemagluttinin repeat 2022 2198 0.003 T 22-04-2016 IPR025157 Haemagluttinin repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 SUPERFAMILY SSF51126 77 357 2.2E-69 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 203 5.1E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 Pfam PF04829 Pre-toxin domain with VENN motif 3030 3079 7.3E-20 T 22-04-2016 IPR006914 VENN motif-containing domain YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 SMART SM00912 88 208 8.4E-48 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 Gene3D G3DSA:2.160.20.10 76 367 1.7E-100 T 22-04-2016 IPR012334 Pectin lyase fold YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 Pfam PF05860 haemagglutination activity domain 75 207 1.3E-33 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 PANTHER PTHR32093 1 552 8.1E-131 T 22-04-2016 YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1361 1389 0.18 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 994 1031 0.19 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 929 969 6.2E-9 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 514 543 2.4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1221 1252 0.0036 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1439 1471 2.0 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1452 1490 2.4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1998 2035 1.2 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 668 699 0.013 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1549 1576 0.31 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 317 353 0.11 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1645 1675 0.079 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 353 388 7.8E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 973 1011 0.0052 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 8b3a4a22d3aed82fdd77ddc98a81dce8 3295 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 1.5E-6 T 22-04-2016 IPR024973 ESPR domain YPO2290 37d7d56bcee1c8bbb6a63ae7dcabb7c8 1023 Gene3D G3DSA:3.30.420.40 562 656 6.7E-5 T 22-04-2016 YPO2290 37d7d56bcee1c8bbb6a63ae7dcabb7c8 1023 PIRSF PIRSF034585 1 1023 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB YPO2290 37d7d56bcee1c8bbb6a63ae7dcabb7c8 1023 Pfam PF07520 Virulence factor SrfB 1 1020 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB YPO3444 3d08fc094a0e845df22c08e0e4636cc6 167 Pfam PF00583 Acetyltransferase (GNAT) family 66 145 7.3E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3444 3d08fc094a0e845df22c08e0e4636cc6 167 Gene3D G3DSA:3.40.630.30 10 167 6.4E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3444 3d08fc094a0e845df22c08e0e4636cc6 167 PANTHER PTHR13947:SF7 1 167 4.0E-58 T 22-04-2016 YPO3444 3d08fc094a0e845df22c08e0e4636cc6 167 PANTHER PTHR13947 1 167 4.0E-58 T 22-04-2016 YPO3444 3d08fc094a0e845df22c08e0e4636cc6 167 SUPERFAMILY SSF55729 9 167 6.0E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO0797 5c5087926b3fbefdb3f944d33be5a7bd 313 Pfam PF03466 LysR substrate binding domain 93 297 9.0E-36 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0797 5c5087926b3fbefdb3f944d33be5a7bd 313 PANTHER PTHR30427 2 312 8.9E-149 T 22-04-2016 YPO0797 5c5087926b3fbefdb3f944d33be5a7bd 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.4E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0797 5c5087926b3fbefdb3f944d33be5a7bd 313 SUPERFAMILY SSF53850 95 298 3.57E-37 T 22-04-2016 YPO0797 5c5087926b3fbefdb3f944d33be5a7bd 313 Gene3D G3DSA:1.10.10.10 4 83 3.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0797 5c5087926b3fbefdb3f944d33be5a7bd 313 Gene3D G3DSA:3.40.190.10 184 267 2.2E-21 T 22-04-2016 YPO0797 5c5087926b3fbefdb3f944d33be5a7bd 313 SUPERFAMILY SSF46785 3 84 1.36E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0797 5c5087926b3fbefdb3f944d33be5a7bd 313 PANTHER PTHR30427:SF1 2 312 8.9E-149 T 22-04-2016 YPO0797 5c5087926b3fbefdb3f944d33be5a7bd 313 Gene3D G3DSA:3.40.190.10 95 183 4.8E-16 T 22-04-2016 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 461 4.2E-112 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 PANTHER PTHR30203:SF15 1 462 1.1E-195 T 22-04-2016 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 Gene3D G3DSA:1.20.1600.10 138 310 1.4E-94 T 22-04-2016 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 Gene3D G3DSA:1.20.1600.10 348 461 1.4E-94 T 22-04-2016 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 Gene3D G3DSA:1.20.1600.10 47 85 1.4E-94 T 22-04-2016 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 SUPERFAMILY SSF56954 2 462 3.79E-104 T 22-04-2016 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 Pfam PF02321 Outer membrane efflux protein 280 459 1.6E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 Pfam PF02321 Outer membrane efflux protein 60 250 1.9E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 PANTHER PTHR30203 1 462 1.1E-195 T 22-04-2016 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 Gene3D G3DSA:2.20.200.10 311 346 1.1E-19 T 22-04-2016 YPO3481 ce1f0531b0461daae79cee8f31b04ce2 468 Gene3D G3DSA:2.20.200.10 96 137 1.1E-19 T 22-04-2016 YPO2332 ef70c414d629867e598b12f2a12ddaf1 219 Pfam PF02308 MgtC family 10 138 2.7E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO2332 ef70c414d629867e598b12f2a12ddaf1 219 PANTHER PTHR33778 1 147 1.1E-62 T 22-04-2016 YPO2332 ef70c414d629867e598b12f2a12ddaf1 219 PRINTS PR01837 MgtC/SapB protein signature 31 49 3.7E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO2332 ef70c414d629867e598b12f2a12ddaf1 219 PRINTS PR01837 MgtC/SapB protein signature 92 116 3.7E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO2332 ef70c414d629867e598b12f2a12ddaf1 219 PRINTS PR01837 MgtC/SapB protein signature 12 31 3.7E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO2332 ef70c414d629867e598b12f2a12ddaf1 219 PRINTS PR01837 MgtC/SapB protein signature 65 87 3.7E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YPO1350 ae3d7ca3da9245f7c0f7adde5edb09d8 238 PANTHER PTHR30133:SF2 1 238 3.2E-160 T 22-04-2016 YPO1350 ae3d7ca3da9245f7c0f7adde5edb09d8 238 PANTHER PTHR30133 1 238 3.2E-160 T 22-04-2016 YPO1350 ae3d7ca3da9245f7c0f7adde5edb09d8 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 4.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1350 ae3d7ca3da9245f7c0f7adde5edb09d8 238 SUPERFAMILY SSF161098 7 216 1.44E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1350 ae3d7ca3da9245f7c0f7adde5edb09d8 238 Gene3D G3DSA:1.10.3720.10 4 230 3.4E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1350 ae3d7ca3da9245f7c0f7adde5edb09d8 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 79 8.0E-12 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 86.871 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 SUPERFAMILY SSF56176 7 194 6.07E-44 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 332 5.8E-36 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 Gene3D G3DSA:3.90.78.10 233 343 6.8E-45 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 Pfam PF01565 FAD binding domain 22 153 2.9E-25 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 Gene3D G3DSA:3.30.43.10 7 70 4.9E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 Gene3D G3DSA:3.30.465.10 74 232 6.1E-53 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 PANTHER PTHR21071:SF6 7 340 1.6E-197 T 22-04-2016 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 332 6.7E-105 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 PANTHER PTHR21071 7 340 1.6E-197 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3760 4e66f0ee3356f4bdde52354fb4fb01c7 345 SUPERFAMILY SSF56194 205 342 7.19E-52 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO1335 3cdda94c162ddb977b034f5eb64a1e9a 154 Pfam PF10767 Protein of unknown function (DUF2593) 11 148 1.7E-62 T 22-04-2016 IPR019703 Protein of unknown function DUF2593 YPO2465 fb332b6635be28b1d540319a96d38092 448 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 58 436 9.9E-174 T 22-04-2016 IPR013397 CRISPR-associated protein Csy1 YPO2465 fb332b6635be28b1d540319a96d38092 448 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 59 429 6.0E-132 T 22-04-2016 IPR013397 CRISPR-associated protein Csy1 YPO1981 1432100deb0f7c77aebeda28089410b9 428 PANTHER PTHR36932:SF2 5 428 1.2E-178 T 22-04-2016 YPO1981 1432100deb0f7c77aebeda28089410b9 428 PANTHER PTHR36932 5 428 1.2E-178 T 22-04-2016 YPO1981 1432100deb0f7c77aebeda28089410b9 428 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 3 424 6.3E-177 T 22-04-2016 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 Pfam PF00717 Peptidase S24-like 93 165 3.5E-20 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 ProSitePatterns PS00761 Signal peptidases I signature 3. 277 290 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 Gene3D G3DSA:2.10.109.10 272 317 3.0E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 Gene3D G3DSA:2.10.109.10 83 161 3.0E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 ProSitePatterns PS00501 Signal peptidases I serine active site. 96 103 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 Gene3D G3DSA:2.170.230.10 162 271 9.7E-40 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 PANTHER PTHR12383 3 182 6.4E-135 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 PANTHER PTHR12383 254 316 6.4E-135 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 PANTHER PTHR12383:SF27 3 182 6.4E-135 T 22-04-2016 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 PANTHER PTHR12383:SF27 254 316 6.4E-135 T 22-04-2016 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 SUPERFAMILY SSF51306 85 331 5.23E-77 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 Pfam PF10502 Signal peptidase, peptidase S26 270 310 3.9E-6 T 22-04-2016 IPR019533 Peptidase S26 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 268 312 3.9E-17 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 72 166 4.6E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 ProSitePatterns PS00760 Signal peptidases I lysine active site. 153 165 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 87 103 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 272 291 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPO2717 70cbb5e5da4813458dc09c7fbdf6399f 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 151 163 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 1.4E-285 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 PIRSF PIRSF006294 3 539 7.4E-231 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 PANTHER PTHR30031 7 539 0.0 T 22-04-2016 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 SUPERFAMILY SSF53795 228 539 8.47E-129 T 22-04-2016 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 6.9E-211 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 15 537 55.346 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 Gene3D G3DSA:3.90.228.20 227 289 1.5E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 Gene3D G3DSA:3.90.228.20 350 538 1.5E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 SUPERFAMILY SSF68923 8 226 2.09E-91 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 PANTHER PTHR30031:SF0 7 539 0.0 T 22-04-2016 YPO0138 c3ae84ebf659e3ff0f7ba3c7718306ef 539 Gene3D G3DSA:3.40.449.10 21 226 3.1E-88 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YPO0871 056d47a7a7b0a1204e7ec8de4288c270 94 SUPERFAMILY SSF101125 2 89 9.42E-37 T 22-04-2016 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 YPO0871 056d47a7a7b0a1204e7ec8de4288c270 94 Pfam PF09204 Bacterial self-protective colicin-like immunity 1 87 2.1E-34 T 22-04-2016 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 YPO1105 ebfc457ab7a17d9330fbf204e7cee607 559 PIRSF PIRSF003128 7 559 7.2E-157 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YPO1105 ebfc457ab7a17d9330fbf204e7cee607 559 PANTHER PTHR11059 8 559 6.3E-184 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YPO1105 ebfc457ab7a17d9330fbf204e7cee607 559 SUPERFAMILY SSF52540 293 345 7.96E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1105 ebfc457ab7a17d9330fbf204e7cee607 559 SUPERFAMILY SSF52540 7 205 7.96E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1105 ebfc457ab7a17d9330fbf204e7cee607 559 SUPERFAMILY SSF52540 374 520 7.96E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1105 ebfc457ab7a17d9330fbf204e7cee607 559 Gene3D G3DSA:3.40.50.300 437 502 6.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1105 ebfc457ab7a17d9330fbf204e7cee607 559 Pfam PF02463 RecF/RecN/SMC N terminal domain 8 518 3.7E-19 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal YPO1105 ebfc457ab7a17d9330fbf204e7cee607 559 TIGRFAM TIGR00634 recN: DNA repair protein RecN 7 558 1.1E-166 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YPO1105 ebfc457ab7a17d9330fbf204e7cee607 559 Gene3D G3DSA:3.40.50.300 7 212 8.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3039 2a676b788b59f78c675f40622bfdb390 88 PANTHER PTHR38603 1 88 1.6E-36 T 22-04-2016 YPO3039 2a676b788b59f78c675f40622bfdb390 88 Pfam PF03927 NapD protein 6 81 6.1E-25 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.354 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:1.10.287.80 202 235 6.4E-40 T 22-04-2016 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:1.10.287.80 19 60 6.4E-40 T 22-04-2016 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 PANTHER PTHR11693 1 287 1.4E-138 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:1.10.287.80 236 282 3.7E-30 T 22-04-2016 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.4E-111 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 Pfam PF00231 ATP synthase 5 286 2.4E-90 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 SUPERFAMILY SSF52943 2 287 2.62E-96 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain YPO4122 a9cce7d7037e16779cdf890fcf49d618 287 Gene3D G3DSA:3.40.1380.10 63 191 5.2E-43 T 22-04-2016 YPO4129 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 5.4E-62 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YPO4129 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 PANTHER PTHR31760:SF0 1 206 2.0E-85 T 22-04-2016 YPO4129 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 Gene3D G3DSA:3.40.50.150 4 204 6.4E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO4129 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 SUPERFAMILY SSF53335 5 204 9.58E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO4129 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 204 2.9E-58 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YPO4129 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 PIRSF PIRSF003078 1 206 5.0E-61 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YPO4129 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 PANTHER PTHR31760 1 206 2.0E-85 T 22-04-2016 YPO4129 6e90c9f4137c8c5cbb72b2a7e4204ee8 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.589 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YPO1821 8e39ae0e1cfe7621da0539c1a9f85281 178 PANTHER PTHR38766:SF1 55 178 5.3E-41 T 22-04-2016 YPO1821 8e39ae0e1cfe7621da0539c1a9f85281 178 PANTHER PTHR38766 55 178 5.3E-41 T 22-04-2016 YPO1821 8e39ae0e1cfe7621da0539c1a9f85281 178 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 70 138 1.6E-22 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 YPO1821 8e39ae0e1cfe7621da0539c1a9f85281 178 Pfam PF04347 Flagellar biosynthesis protein, FliO 82 172 9.0E-22 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 253 1.5E-74 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 PANTHER PTHR30481:SF3 2 271 5.7E-130 T 22-04-2016 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 SUPERFAMILY SSF53335 5 269 3.06E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0154 a385d9919fb510604bdd45c6141cf83a 271 Gene3D G3DSA:1.10.1020.10 60 156 2.8E-34 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 Gene3D G3DSA:3.40.50.150 1 59 2.9E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0154 a385d9919fb510604bdd45c6141cf83a 271 Gene3D G3DSA:3.40.50.150 160 268 2.9E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0154 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.7E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.7E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.7E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.7E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 269 2.4E-93 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 PANTHER PTHR30481 2 271 5.7E-130 T 22-04-2016 YPO0154 a385d9919fb510604bdd45c6141cf83a 271 PIRSF PIRSF000398 1 271 2.9E-63 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 YPO3831 218afb2e0f04ed78f7d375fde17d162f 206 Pfam PF01810 LysE type translocator 14 202 3.1E-45 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO3831 218afb2e0f04ed78f7d375fde17d162f 206 PANTHER PTHR30086 1 205 3.2E-120 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO3831 218afb2e0f04ed78f7d375fde17d162f 206 PANTHER PTHR30086:SF14 1 205 3.2E-120 T 22-04-2016 YPO3831 218afb2e0f04ed78f7d375fde17d162f 206 PIRSF PIRSF006324 1 205 1.6E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO1347 d705acf2ca46add11fdea2965b7ab96e 456 Pfam PF10100 Uncharacterized protein conserved in bacteria (DUF2338) 7 452 7.5E-178 T 22-04-2016 IPR016935 Protein of unknown function DUF2338 YPO1347 d705acf2ca46add11fdea2965b7ab96e 456 PIRSF PIRSF029692 2 456 1.6E-205 T 22-04-2016 IPR016935 Protein of unknown function DUF2338 YPO1347 d705acf2ca46add11fdea2965b7ab96e 456 SUPERFAMILY SSF51735 8 144 6.3E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1347 d705acf2ca46add11fdea2965b7ab96e 456 Gene3D G3DSA:3.40.50.720 8 131 2.3E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3032 8ecb64d120c024a3322f2028315e855a 309 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 2.4E-131 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 234 261 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 125 147 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 48 69 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 262 288 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 162 191 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 90 114 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 PRINTS PR00073 Coprogen oxidase signature 31 47 8.7E-86 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 56.517 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 SUPERFAMILY SSF102886 5 302 7.59E-139 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 PIRSF PIRSF000166 2 303 9.3E-128 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 PANTHER PTHR10755 2 303 2.5E-193 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO3032 8ecb64d120c024a3322f2028315e855a 309 Gene3D G3DSA:3.40.1500.10 5 302 4.3E-135 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YPO1396 f985fc74f2c0c6cea852a04715774e7e 328 PANTHER PTHR30160 1 323 1.4E-105 T 22-04-2016 YPO1396 f985fc74f2c0c6cea852a04715774e7e 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 317 7.0E-115 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 YPO1396 f985fc74f2c0c6cea852a04715774e7e 328 PANTHER PTHR30160:SF13 1 323 1.4E-105 T 22-04-2016 YPO1396 f985fc74f2c0c6cea852a04715774e7e 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 320 3.8E-106 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 YPO1396 f985fc74f2c0c6cea852a04715774e7e 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 321 40.666 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 YPO1396 f985fc74f2c0c6cea852a04715774e7e 328 SUPERFAMILY SSF52540 46 177 3.04E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1396 f985fc74f2c0c6cea852a04715774e7e 328 Gene3D G3DSA:3.40.50.300 45 108 1.6E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1396 f985fc74f2c0c6cea852a04715774e7e 328 Gene3D G3DSA:3.40.50.300 155 167 1.6E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2540 11d2ff9450d6074815c5cad73c088fe5 178 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 8.0E-65 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 YPO2540 11d2ff9450d6074815c5cad73c088fe5 178 SUPERFAMILY SSF52540 2 166 2.91E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2540 11d2ff9450d6074815c5cad73c088fe5 178 Pfam PF01202 Shikimate kinase 12 166 6.5E-11 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YPO2540 11d2ff9450d6074815c5cad73c088fe5 178 Gene3D G3DSA:3.40.50.300 2 167 3.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2540 11d2ff9450d6074815c5cad73c088fe5 178 PANTHER PTHR11603 1 178 6.4E-89 T 22-04-2016 YPO0943 e099cd2e749ba16f95428ce1942bfbdd 184 Pfam PF02325 YGGT family 10 76 6.5E-21 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 YPO0943 e099cd2e749ba16f95428ce1942bfbdd 184 Pfam PF02325 YGGT family 108 171 5.1E-18 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 YPO0943 e099cd2e749ba16f95428ce1942bfbdd 184 PANTHER PTHR33219 3 184 3.7E-92 T 22-04-2016 YPO0943 e099cd2e749ba16f95428ce1942bfbdd 184 PANTHER PTHR33219:SF5 3 184 3.7E-92 T 22-04-2016 YPO2502 1be9366e2501c5dac2a4028b116a7115 408 PANTHER PTHR11695:SF581 72 408 5.1E-241 T 22-04-2016 YPO2502 1be9366e2501c5dac2a4028b116a7115 408 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 85 199 3.5E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YPO2502 1be9366e2501c5dac2a4028b116a7115 408 Gene3D G3DSA:3.90.180.10 54 233 6.7E-47 T 22-04-2016 IPR011032 GroES-like YPO2502 1be9366e2501c5dac2a4028b116a7115 408 SUPERFAMILY SSF50129 57 241 1.34E-43 T 22-04-2016 IPR011032 GroES-like YPO2502 1be9366e2501c5dac2a4028b116a7115 408 Gene3D G3DSA:3.40.50.720 234 355 1.3E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2502 1be9366e2501c5dac2a4028b116a7115 408 PANTHER PTHR11695 72 408 5.1E-241 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YPO2502 1be9366e2501c5dac2a4028b116a7115 408 SUPERFAMILY SSF51735 209 363 8.58E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2502 1be9366e2501c5dac2a4028b116a7115 408 Pfam PF00107 Zinc-binding dehydrogenase 242 357 1.2E-21 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YPO2502 1be9366e2501c5dac2a4028b116a7115 408 SMART SM00829 68 406 0.0063 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YPO2123 a757d4ae3ab8af6606af16e2c989ca15 236 SMART SM00232 1 124 3.3E-22 T 22-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 YPO2123 a757d4ae3ab8af6606af16e2c989ca15 236 Gene3D G3DSA:3.90.1720.10 122 231 1.1E-14 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO2123 a757d4ae3ab8af6606af16e2c989ca15 236 SUPERFAMILY SSF102712 2 103 2.09E-23 T 22-04-2016 YPO2123 a757d4ae3ab8af6606af16e2c989ca15 236 Pfam PF14464 Prokaryotic homologs of the JAB domain 4 99 4.4E-17 T 22-04-2016 IPR028090 JAB domain, prokaryotic YPO2123 a757d4ae3ab8af6606af16e2c989ca15 236 SUPERFAMILY SSF54001 112 231 4.41E-14 T 22-04-2016 YPO2123 a757d4ae3ab8af6606af16e2c989ca15 236 PANTHER PTHR34858:SF1 1 236 5.8E-64 T 22-04-2016 YPO2123 a757d4ae3ab8af6606af16e2c989ca15 236 Gene3D G3DSA:3.40.140.10 2 121 3.7E-28 T 22-04-2016 YPO2123 a757d4ae3ab8af6606af16e2c989ca15 236 PANTHER PTHR34858 1 236 5.8E-64 T 22-04-2016 YPO2123 a757d4ae3ab8af6606af16e2c989ca15 236 Pfam PF00877 NlpC/P60 family 116 230 1.3E-19 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO2927 b041527537b65fcf9efd7e82da948961 86 SUPERFAMILY SSF54862 5 63 3.87E-17 T 22-04-2016 YPO2927 b041527537b65fcf9efd7e82da948961 86 Pfam PF12838 4Fe-4S dicluster domain 8 56 1.3E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2927 b041527537b65fcf9efd7e82da948961 86 Gene3D G3DSA:3.30.70.20 4 71 4.6E-16 T 22-04-2016 YPO2927 b041527537b65fcf9efd7e82da948961 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2927 b041527537b65fcf9efd7e82da948961 86 PANTHER PTHR24960 1 85 8.2E-31 T 22-04-2016 YPO2927 b041527537b65fcf9efd7e82da948961 86 PANTHER PTHR24960:SF38 1 85 8.2E-31 T 22-04-2016 YPO0409 96b518d1fb68545e7100c083eeb0c519 339 SUPERFAMILY SSF53822 26 339 1.08E-81 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0409 96b518d1fb68545e7100c083eeb0c519 339 Gene3D G3DSA:3.40.50.2300 149 296 6.8E-32 T 22-04-2016 YPO0409 96b518d1fb68545e7100c083eeb0c519 339 Gene3D G3DSA:3.40.50.2300 28 148 1.8E-29 T 22-04-2016 YPO0409 96b518d1fb68545e7100c083eeb0c519 339 PANTHER PTHR32196 23 330 1.8E-161 T 22-04-2016 YPO0409 96b518d1fb68545e7100c083eeb0c519 339 PANTHER PTHR32196:SF1 23 330 1.8E-161 T 22-04-2016 IPR030159 Autoinducer 2-binding protein LsrB/rhamnose-binding protein RhaS GO:0043190 YPO0409 96b518d1fb68545e7100c083eeb0c519 339 Pfam PF13407 Periplasmic binding protein domain 29 284 3.3E-53 T 22-04-2016 IPR025997 Periplasmic binding protein YPO2007 8d2ac3353a5971e1d5693ddc4dd9be52 276 SUPERFAMILY SSF53474 57 266 8.47E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2007 8d2ac3353a5971e1d5693ddc4dd9be52 276 Gene3D G3DSA:3.40.50.1820 58 158 3.3E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2007 8d2ac3353a5971e1d5693ddc4dd9be52 276 Gene3D G3DSA:3.40.50.1820 167 266 1.1E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2007 8d2ac3353a5971e1d5693ddc4dd9be52 276 PANTHER PTHR23024 59 267 9.1E-21 T 22-04-2016 YPO2007 8d2ac3353a5971e1d5693ddc4dd9be52 276 Pfam PF07859 alpha/beta hydrolase fold 73 155 9.9E-9 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 YPO2007 8d2ac3353a5971e1d5693ddc4dd9be52 276 Pfam PF07859 alpha/beta hydrolase fold 161 246 3.2E-10 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 YPO0205 96055f2032bce55f850cd698f59e4ab5 64 PANTHER PTHR37424 2 64 4.6E-22 T 22-04-2016 YPO0205 96055f2032bce55f850cd698f59e4ab5 64 PANTHER PTHR37424:SF1 2 64 4.6E-22 T 22-04-2016 YPO0205 96055f2032bce55f850cd698f59e4ab5 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 6.8E-15 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain YPO1314 8e191b2372fb4a82a33b04539f06a8cb 206 Gene3D G3DSA:3.40.30.10 1 82 1.2E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1314 8e191b2372fb4a82a33b04539f06a8cb 206 Gene3D G3DSA:1.20.1050.10 83 203 1.3E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO1314 8e191b2372fb4a82a33b04539f06a8cb 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 80 9.5E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPO1314 8e191b2372fb4a82a33b04539f06a8cb 206 SUPERFAMILY SSF47616 72 202 4.46E-25 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO1314 8e191b2372fb4a82a33b04539f06a8cb 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 194 1.6E-5 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YPO1314 8e191b2372fb4a82a33b04539f06a8cb 206 SUPERFAMILY SSF52833 1 83 2.59E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1314 8e191b2372fb4a82a33b04539f06a8cb 206 PANTHER PTHR11260:SF157 1 203 5.2E-90 T 22-04-2016 YPO1314 8e191b2372fb4a82a33b04539f06a8cb 206 PANTHER PTHR11260 1 203 5.2E-90 T 22-04-2016 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.90.1440.10 230 368 8.6E-47 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF52540 416 618 1.06E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 SMART SM00958 228 358 8.9E-85 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 SMART SM00957 6 402 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.9E-69 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF02810 SEC-C motif 884 902 9.9E-11 T 22-04-2016 IPR004027 SEC-C motif YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF07517 SecA DEAD-like domain 7 402 1.0E-131 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.941 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.40.50.300 417 619 4.0E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.7E-39 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF52540 368 415 1.93E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF52540 5 228 1.93E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:1.10.3060.10 648 831 1.8E-59 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.40.50.300 2 228 9.0E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 Gene3D G3DSA:3.40.50.300 369 416 9.0E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 PANTHER PTHR30612 1 520 0.0 T 22-04-2016 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 PANTHER PTHR30612 550 904 0.0 T 22-04-2016 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 ProSitePatterns PS01312 SecA family signature. 500 515 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF81886 880 892 3.66E-84 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF81886 620 840 3.66E-84 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 SUPERFAMILY SSF81767 227 368 6.8E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 339 361 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 63 87 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 170 190 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 101 115 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 413 426 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 117 127 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPO0564 4bee0ef5ead1da96da306619c182f5dc 904 PRINTS PR00906 SecA protein signature 376 393 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YPO2328 b1af27aa6ba474b1a48074ac7e746b24 898 Pfam PF11739 Dicarboxylate transport 661 862 1.6E-66 T 22-04-2016 IPR021730 Dicarboxylate transport YPO0213 80a4a136f9f763c7081cd668dd447c61 274 SMART SM01382 124 251 1.3E-89 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 SMART SM01383 42 118 3.6E-48 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 Gene3D G3DSA:2.40.50.140 1 114 3.5E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0213 80a4a136f9f763c7081cd668dd447c61 274 Gene3D G3DSA:2.30.30.30 119 195 1.0E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 1.6E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 Gene3D G3DSA:4.10.950.10 196 272 5.8E-35 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 SUPERFAMILY SSF50104 127 269 1.14E-59 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPO0213 80a4a136f9f763c7081cd668dd447c61 274 PIRSF PIRSF002158 12 274 1.5E-100 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.8E-34 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.315 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 SUPERFAMILY SSF50249 2 125 1.1E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0213 80a4a136f9f763c7081cd668dd447c61 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 8.0E-132 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YPO0213 80a4a136f9f763c7081cd668dd447c61 274 PANTHER PTHR13691 1 273 8.9E-150 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3328 02fa36422d7110a740993083a45a7145 367 PANTHER PTHR32196 2 365 1.2E-250 T 22-04-2016 YPO3328 02fa36422d7110a740993083a45a7145 367 PANTHER PTHR32196:SF36 2 365 1.2E-250 T 22-04-2016 YPO3328 02fa36422d7110a740993083a45a7145 367 Gene3D G3DSA:3.40.50.2300 68 185 1.0E-29 T 22-04-2016 YPO3328 02fa36422d7110a740993083a45a7145 367 SUPERFAMILY SSF53822 65 336 7.54E-63 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO3328 02fa36422d7110a740993083a45a7145 367 Pfam PF13407 Periplasmic binding protein domain 70 325 9.6E-52 T 22-04-2016 IPR025997 Periplasmic binding protein YPO3328 02fa36422d7110a740993083a45a7145 367 Gene3D G3DSA:3.40.50.2300 186 333 1.2E-21 T 22-04-2016 YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 SMART SM00729 147 367 1.2E-63 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 PANTHER PTHR11918:SF43 1 474 1.0E-239 T 22-04-2016 YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.2E-28 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 Gene3D G3DSA:3.80.30.20 146 380 7.7E-81 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 Pfam PF01938 TRAM domain 378 440 3.7E-18 T 22-04-2016 IPR002792 TRAM domain YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 SUPERFAMILY SSF102114 127 372 1.31E-63 T 22-04-2016 YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.734 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 438 1.3E-206 T 22-04-2016 YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 PANTHER PTHR11918 1 474 1.0E-239 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.3E-156 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 Pfam PF04055 Radical SAM superfamily 151 325 1.2E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO2620 8665f741e1ee0e3d7a34af99bb538eab 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 YPO2339 c419e214ad182a0a685bcfb289500bcc 538 PIRSF PIRSF002741 6 538 2.3E-112 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPO2339 c419e214ad182a0a685bcfb289500bcc 538 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 104 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YPO2339 c419e214ad182a0a685bcfb289500bcc 538 PANTHER PTHR30290:SF23 11 538 0.0 T 22-04-2016 YPO2339 c419e214ad182a0a685bcfb289500bcc 538 PANTHER PTHR30290 11 538 0.0 T 22-04-2016 YPO2339 c419e214ad182a0a685bcfb289500bcc 538 Gene3D G3DSA:3.10.105.10 306 505 8.1E-65 T 22-04-2016 YPO2339 c419e214ad182a0a685bcfb289500bcc 538 Gene3D G3DSA:3.40.190.10 154 305 2.8E-51 T 22-04-2016 YPO2339 c419e214ad182a0a685bcfb289500bcc 538 SUPERFAMILY SSF53850 32 526 4.6E-140 T 22-04-2016 YPO2339 c419e214ad182a0a685bcfb289500bcc 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 453 1.8E-86 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPO1892 15d9e40c3f559d6f9782aabe2deb2daf 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 125 4.4E-27 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPO1892 15d9e40c3f559d6f9782aabe2deb2daf 337 PANTHER PTHR22604:SF92 1 337 4.2E-112 T 22-04-2016 YPO1892 15d9e40c3f559d6f9782aabe2deb2daf 337 SUPERFAMILY SSF55347 130 303 1.96E-20 T 22-04-2016 YPO1892 15d9e40c3f559d6f9782aabe2deb2daf 337 Gene3D G3DSA:3.30.360.10 139 337 3.4E-35 T 22-04-2016 YPO1892 15d9e40c3f559d6f9782aabe2deb2daf 337 SUPERFAMILY SSF51735 3 153 8.91E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1892 15d9e40c3f559d6f9782aabe2deb2daf 337 PANTHER PTHR22604 1 337 4.2E-112 T 22-04-2016 YPO1892 15d9e40c3f559d6f9782aabe2deb2daf 337 Gene3D G3DSA:3.40.50.720 2 138 1.4E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2678 05201b49186c63db429f9d3f10d21cb8 105 Gene3D G3DSA:3.40.50.270 1 104 4.5E-35 T 22-04-2016 YPO2678 05201b49186c63db429f9d3f10d21cb8 105 SUPERFAMILY SSF52794 4 103 6.28E-32 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO2678 05201b49186c63db429f9d3f10d21cb8 105 PANTHER PTHR34581:SF2 4 105 2.7E-52 T 22-04-2016 YPO2678 05201b49186c63db429f9d3f10d21cb8 105 PANTHER PTHR34581 4 105 2.7E-52 T 22-04-2016 YPO2678 05201b49186c63db429f9d3f10d21cb8 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.2E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO2872 c502c305122f16dfd032f2a63cc0960d 459 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 7.4E-137 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YPO2872 c502c305122f16dfd032f2a63cc0960d 459 PANTHER PTHR30008:SF0 2 455 1.2E-197 T 22-04-2016 YPO2872 c502c305122f16dfd032f2a63cc0960d 459 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.0E-32 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 YPO2872 c502c305122f16dfd032f2a63cc0960d 459 Pfam PF02601 Exonuclease VII, large subunit 126 440 6.9E-101 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 YPO2872 c502c305122f16dfd032f2a63cc0960d 459 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.293 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YPO2872 c502c305122f16dfd032f2a63cc0960d 459 PANTHER PTHR30008 2 455 1.2E-197 T 22-04-2016 YPO1198 ebf882104f052e3ed4a639041a62afdd 312 Gene3D G3DSA:3.10.580.10 269 307 3.2E-4 T 22-04-2016 YPO1198 ebf882104f052e3ed4a639041a62afdd 312 PANTHER PTHR24220:SF434 3 296 2.3E-163 T 22-04-2016 YPO1198 ebf882104f052e3ed4a639041a62afdd 312 PANTHER PTHR24220 3 296 2.3E-163 T 22-04-2016 YPO1198 ebf882104f052e3ed4a639041a62afdd 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1198 ebf882104f052e3ed4a639041a62afdd 312 SMART SM00382 26 213 2.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1198 ebf882104f052e3ed4a639041a62afdd 312 SUPERFAMILY SSF52540 1 240 1.41E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1198 ebf882104f052e3ed4a639041a62afdd 312 Gene3D G3DSA:3.40.50.300 1 235 5.0E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1198 ebf882104f052e3ed4a639041a62afdd 312 Pfam PF00005 ABC transporter 17 163 4.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1198 ebf882104f052e3ed4a639041a62afdd 312 SUPERFAMILY SSF54631 269 306 1.7E-5 T 22-04-2016 YPO1158 b4f0105ad7b8fc23b5646c6619ad2747 307 Gene3D G3DSA:3.40.50.10680 82 301 3.0E-50 T 22-04-2016 YPO1158 b4f0105ad7b8fc23b5646c6619ad2747 307 SUPERFAMILY SSF142338 11 295 2.75E-80 T 22-04-2016 YPO1158 b4f0105ad7b8fc23b5646c6619ad2747 307 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.733 T 22-04-2016 IPR010119 Gluconeogenesis factor YPO1158 b4f0105ad7b8fc23b5646c6619ad2747 307 PANTHER PTHR30135 1 307 3.6E-116 T 22-04-2016 YPO1158 b4f0105ad7b8fc23b5646c6619ad2747 307 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 261 3.0E-94 T 22-04-2016 IPR010119 Gluconeogenesis factor YPO1158 b4f0105ad7b8fc23b5646c6619ad2747 307 Pfam PF01933 Uncharacterised protein family UPF0052 12 292 3.1E-73 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YPO0855 7db9a2fbc0fde570d8437ebbe3d73b6c 435 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 219 418 1.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0855 7db9a2fbc0fde570d8437ebbe3d73b6c 435 PANTHER PTHR30193 110 435 5.6E-194 T 22-04-2016 YPO0855 7db9a2fbc0fde570d8437ebbe3d73b6c 435 SUPERFAMILY SSF161098 182 418 1.14E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0855 7db9a2fbc0fde570d8437ebbe3d73b6c 435 SUPERFAMILY SSF160964 128 187 5.36E-8 T 22-04-2016 YPO0855 7db9a2fbc0fde570d8437ebbe3d73b6c 435 Gene3D G3DSA:1.10.3720.10 196 428 1.9E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0855 7db9a2fbc0fde570d8437ebbe3d73b6c 435 Gene3D G3DSA:1.20.58.370 129 167 3.9E-9 T 22-04-2016 YPO0855 7db9a2fbc0fde570d8437ebbe3d73b6c 435 PANTHER PTHR30193:SF17 110 435 5.6E-194 T 22-04-2016 YPO3762 ab68d13dfe36767fd914be7e50f42599 483 Pfam PF02386 Cation transport protein 37 477 4.8E-92 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 YPO3762 ab68d13dfe36767fd914be7e50f42599 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 4.3E-126 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 YPO3762 ab68d13dfe36767fd914be7e50f42599 483 PIRSF PIRSF006247 1 483 2.9E-182 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 YPO3762 ab68d13dfe36767fd914be7e50f42599 483 PANTHER PTHR32024 1 483 6.5E-282 T 22-04-2016 YPO3762 ab68d13dfe36767fd914be7e50f42599 483 PANTHER PTHR32024:SF2 1 483 6.5E-282 T 22-04-2016 YPO1110 6e0750c5470509e9b55745bc6fc86eab 115 SUPERFAMILY SSF81343 5 114 1.24E-28 T 22-04-2016 YPO1110 6e0750c5470509e9b55745bc6fc86eab 115 PANTHER PTHR38689:SF1 2 115 3.5E-61 T 22-04-2016 YPO1110 6e0750c5470509e9b55745bc6fc86eab 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 1.6E-35 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 YPO1110 6e0750c5470509e9b55745bc6fc86eab 115 PIRSF PIRSF000169 1 115 4.4E-41 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 YPO1110 6e0750c5470509e9b55745bc6fc86eab 115 Gene3D G3DSA:1.20.1300.10 1 114 1.3E-39 T 22-04-2016 YPO1110 6e0750c5470509e9b55745bc6fc86eab 115 PANTHER PTHR38689 2 115 3.5E-61 T 22-04-2016 YPO3048 3b482a623d19cfdfc9d3f7d414d4626a 356 PANTHER PTHR24220 5 265 9.0E-147 T 22-04-2016 YPO3048 3b482a623d19cfdfc9d3f7d414d4626a 356 SUPERFAMILY SSF52540 4 249 8.57E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3048 3b482a623d19cfdfc9d3f7d414d4626a 356 Gene3D G3DSA:3.40.50.300 4 241 2.1E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3048 3b482a623d19cfdfc9d3f7d414d4626a 356 Pfam PF00005 ABC transporter 19 167 3.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3048 3b482a623d19cfdfc9d3f7d414d4626a 356 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3048 3b482a623d19cfdfc9d3f7d414d4626a 356 PANTHER PTHR24220:SF524 5 265 9.0E-147 T 22-04-2016 YPO3048 3b482a623d19cfdfc9d3f7d414d4626a 356 SMART SM00382 28 217 8.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3048 3b482a623d19cfdfc9d3f7d414d4626a 356 SUPERFAMILY SSF50331 243 330 1.45E-5 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO0896a a262ac5c67daeb0ba9887e853d2e124d 141 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 130 1.1E-56 T 22-04-2016 IPR009883 Toxin CptA YPO0896a a262ac5c67daeb0ba9887e853d2e124d 141 PIRSF PIRSF020653 1 139 2.5E-76 T 22-04-2016 IPR009883 Toxin CptA YPO0896a a262ac5c67daeb0ba9887e853d2e124d 141 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 130 8.0E-53 T 22-04-2016 IPR009883 Toxin CptA YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 PANTHER PTHR30251:SF8 1 214 1.2E-114 T 22-04-2016 YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 SUPERFAMILY SSF49584 137 211 3.14E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 Gene3D G3DSA:2.60.40.360 26 140 1.2E-31 T 22-04-2016 IPR008962 PapD-like YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 Gene3D G3DSA:2.60.40.1070 141 211 3.0E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 PANTHER PTHR30251 1 214 1.2E-114 T 22-04-2016 YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 143 2.0E-31 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 144 207 9.9E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 PRINTS PR00969 Pili chaperone signature 76 97 2.7E-14 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 PRINTS PR00969 Pili chaperone signature 104 121 2.7E-14 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 PRINTS PR00969 Pili chaperone signature 27 36 2.7E-14 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1921 c691ed63132617db2a1b2ad897ed3cb2 214 SUPERFAMILY SSF49354 21 133 4.45E-32 T 22-04-2016 IPR008962 PapD-like YPO0310 ce7b8124ce755d69693635c9268585a0 174 Gene3D G3DSA:3.40.1410.10 10 166 7.5E-58 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO0310 ce7b8124ce755d69693635c9268585a0 174 Pfam PF04345 Chorismate lyase 12 168 8.5E-34 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 YPO0310 ce7b8124ce755d69693635c9268585a0 174 SUPERFAMILY SSF64288 8 166 4.37E-52 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO0310 ce7b8124ce755d69693635c9268585a0 174 PANTHER PTHR38683 1 172 8.6E-74 T 22-04-2016 YPO0310 ce7b8124ce755d69693635c9268585a0 174 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 26.273 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 PANTHER PTHR30267:SF2 1 644 0.0 T 22-04-2016 YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 PANTHER PTHR30267 1 644 0.0 T 22-04-2016 YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 Gene3D G3DSA:3.40.50.300 75 158 2.8E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 Gene3D G3DSA:3.40.50.300 243 329 2.8E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 9.0E-74 T 22-04-2016 IPR010650 PrkA C-terminal domain YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 PIRSF PIRSF000549 1 644 8.3E-286 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 Pfam PF08298 PrkA AAA domain 20 380 3.1E-175 T 22-04-2016 IPR013153 PrkA AAA domain YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 SUPERFAMILY SSF52540 75 145 6.05E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 SUPERFAMILY SSF52540 241 368 6.05E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2153 a3f01e457c7ce8d2aca2a346e35c852e 644 SMART SM00763 19 380 2.1E-216 T 22-04-2016 IPR013153 PrkA AAA domain YPO0995 503b56f80748d6fbd7e9cdb458176e45 477 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 43 468 1.3E-107 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 YPO0995 503b56f80748d6fbd7e9cdb458176e45 477 PANTHER PTHR11328 14 475 0.0 T 22-04-2016 YPO0995 503b56f80748d6fbd7e9cdb458176e45 477 PANTHER PTHR11328:SF35 14 475 0.0 T 22-04-2016 YPO0995 503b56f80748d6fbd7e9cdb458176e45 477 Gene3D G3DSA:1.20.1250.20 36 231 2.1E-8 T 22-04-2016 YPO0995 503b56f80748d6fbd7e9cdb458176e45 477 Gene3D G3DSA:1.20.1250.20 258 465 1.1E-8 T 22-04-2016 YPO0995 503b56f80748d6fbd7e9cdb458176e45 477 SUPERFAMILY SSF103473 37 453 3.49E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0995 503b56f80748d6fbd7e9cdb458176e45 477 Pfam PF13347 MFS/sugar transport protein 44 456 1.9E-77 T 22-04-2016 YPCD1.57 af892f31939f0355c7de73bc0a99a50e 165 Gene3D G3DSA:3.40.630.30 2 74 2.1E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPCD1.57 af892f31939f0355c7de73bc0a99a50e 165 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 89 165 3.0E-30 T 22-04-2016 IPR012660 Thioesterase, putative YPCD1.57 af892f31939f0355c7de73bc0a99a50e 165 Gene3D G3DSA:3.10.129.10 75 165 1.7E-43 T 22-04-2016 IPR029069 HotDog domain YPCD1.57 af892f31939f0355c7de73bc0a99a50e 165 PANTHER PTHR23091:SF249 2 102 1.1E-56 T 22-04-2016 YPCD1.57 af892f31939f0355c7de73bc0a99a50e 165 Pfam PF00583 Acetyltransferase (GNAT) family 1 46 6.7E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPCD1.57 af892f31939f0355c7de73bc0a99a50e 165 SUPERFAMILY SSF55729 1 80 1.77E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPCD1.57 af892f31939f0355c7de73bc0a99a50e 165 PANTHER PTHR23091 2 102 1.1E-56 T 22-04-2016 YPCD1.57 af892f31939f0355c7de73bc0a99a50e 165 SUPERFAMILY SSF54637 79 165 3.52E-28 T 22-04-2016 IPR029069 HotDog domain YPCD1.57 af892f31939f0355c7de73bc0a99a50e 165 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 82 165 2.2E-32 T 22-04-2016 IPR012660 Thioesterase, putative YPO3319 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.420.10 587 710 1.6E-46 T 22-04-2016 YPO3319 a2e12da1af08633d35314fc11d694583 737 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 17 735 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPO3319 a2e12da1af08633d35314fc11d694583 737 ProSitePatterns PS00436 Peroxidases active site signature. 94 105 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.520.10 51 247 2.0E-70 T 22-04-2016 YPO3319 a2e12da1af08633d35314fc11d694583 737 SUPERFAMILY SSF48113 31 428 1.22E-141 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 Pfam PF00141 Peroxidase 401 709 1.8E-36 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 Pfam PF00141 Peroxidase 81 393 9.9E-51 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 256 266 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site YPO3319 a2e12da1af08633d35314fc11d694583 737 Hamap MF_01961 Catalase-peroxidase [katG]. 13 735 40.217 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPO3319 a2e12da1af08633d35314fc11d694583 737 SUPERFAMILY SSF48113 428 734 2.95E-107 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 172 184 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 256 271 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 94 108 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 154 171 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00458 Haem peroxidase superfamily signature 640 655 5.8E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 YPO3319 a2e12da1af08633d35314fc11d694583 737 PANTHER PTHR30555 5 737 0.0 T 22-04-2016 YPO3319 a2e12da1af08633d35314fc11d694583 737 PANTHER PTHR30555:SF5 5 737 0.0 T 22-04-2016 YPO3319 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.420.10 248 271 1.1E-45 T 22-04-2016 YPO3319 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.420.10 308 405 1.1E-45 T 22-04-2016 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 264 287 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 30 52 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 71 96 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPO3319 a2e12da1af08633d35314fc11d694583 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 56 69 4.3E-38 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 YPO3319 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.520.10 713 734 1.4E-62 T 22-04-2016 YPO3319 a2e12da1af08633d35314fc11d694583 737 Gene3D G3DSA:1.10.520.10 430 586 1.4E-62 T 22-04-2016 YPO2553 c3532d062db63b5e948232b458a28569 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 72.302 T 22-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 YPO2553 c3532d062db63b5e948232b458a28569 598 PANTHER PTHR11993:SF28 146 593 0.0 T 22-04-2016 YPO2553 c3532d062db63b5e948232b458a28569 598 SUPERFAMILY SSF143243 24 228 1.57E-60 T 22-04-2016 YPO2553 c3532d062db63b5e948232b458a28569 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 1.4E-105 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 YPO2553 c3532d062db63b5e948232b458a28569 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 YPO2553 c3532d062db63b5e948232b458a28569 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 41.874 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 YPO2553 c3532d062db63b5e948232b458a28569 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 159 1.0E-26 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 YPO2553 c3532d062db63b5e948232b458a28569 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 184 25.19 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 YPO2553 c3532d062db63b5e948232b458a28569 598 Gene3D G3DSA:1.10.645.10 215 577 5.3E-47 T 22-04-2016 IPR029014 NiFe hydrogenase-like YPO2553 c3532d062db63b5e948232b458a28569 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 2.3E-45 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 YPO2553 c3532d062db63b5e948232b458a28569 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 9.7E-176 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 YPO2553 c3532d062db63b5e948232b458a28569 598 PANTHER PTHR11993 146 593 0.0 T 22-04-2016 YPO2553 c3532d062db63b5e948232b458a28569 598 SUPERFAMILY SSF56762 224 598 2.49E-121 T 22-04-2016 IPR029014 NiFe hydrogenase-like YPO2553 c3532d062db63b5e948232b458a28569 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 177 1.2E-41 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 Gene3D G3DSA:3.30.450.20 134 269 1.9E-23 T 22-04-2016 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 Gene3D G3DSA:1.10.287.950 362 566 4.8E-56 T 22-04-2016 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 SMART SM00283 347 594 1.4E-85 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 SUPERFAMILY SSF58104 314 595 2.75E-70 T 22-04-2016 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 PANTHER PTHR32089:SF63 89 595 1.4E-244 T 22-04-2016 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 Pfam PF02743 Cache domain 45 254 5.8E-26 T 22-04-2016 IPR033479 Double Cache domain 1 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 Pfam PF00672 HAMP domain 273 341 8.7E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 SUPERFAMILY SSF103190 64 177 7.85E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 SMART SM00304 292 346 5.6E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 PANTHER PTHR32089 89 595 1.4E-244 T 22-04-2016 YPO1229 00d98657f2c7b6cae630dc12fc02e46f 595 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 404 593 2.0E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO1831 9cd96631251d87c364b8e7d7db5c0d18 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 17.929 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO1831 9cd96631251d87c364b8e7d7db5c0d18 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.8E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO1831 9cd96631251d87c364b8e7d7db5c0d18 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.8E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO1831 9cd96631251d87c364b8e7d7db5c0d18 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.8E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO1831 9cd96631251d87c364b8e7d7db5c0d18 103 PANTHER PTHR34653 1 103 4.4E-28 T 22-04-2016 YPO1831 9cd96631251d87c364b8e7d7db5c0d18 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 102 8.8E-26 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO1831 9cd96631251d87c364b8e7d7db5c0d18 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 19 103 2.4E-26 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YPO3234 dff5ec52647d72751e451ca28ce21b71 340 PIRSF PIRSF006268 6 337 1.9E-92 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 YPO3234 dff5ec52647d72751e451ca28ce21b71 340 SUPERFAMILY SSF143631 25 336 1.83E-103 T 22-04-2016 IPR003374 ApbE-like domain YPO3234 dff5ec52647d72751e451ca28ce21b71 340 PANTHER PTHR30040 8 340 4.0E-186 T 22-04-2016 YPO3234 dff5ec52647d72751e451ca28ce21b71 340 Pfam PF02424 ApbE family 33 309 4.6E-85 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 YPO3234 dff5ec52647d72751e451ca28ce21b71 340 PANTHER PTHR30040:SF3 8 340 4.0E-186 T 22-04-2016 YPO0466 790dcba2d205d13fcd4a5a41c0edc7b0 815 Gene3D G3DSA:2.60.20.10 110 210 1.5E-21 T 22-04-2016 YPO0466 790dcba2d205d13fcd4a5a41c0edc7b0 815 Gene3D G3DSA:2.60.20.10 24 109 4.6E-21 T 22-04-2016 YPO0466 790dcba2d205d13fcd4a5a41c0edc7b0 815 SUPERFAMILY SSF49695 27 207 3.89E-16 T 22-04-2016 IPR011024 Gamma-crystallin-related YPO0466 790dcba2d205d13fcd4a5a41c0edc7b0 815 Gene3D G3DSA:3.40.630.30 703 811 1.8E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO0466 790dcba2d205d13fcd4a5a41c0edc7b0 815 SUPERFAMILY SSF55729 713 813 6.16E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3112 32b399d2981f2b13f9f8fd4246b03a42 285 Gene3D G3DSA:3.40.50.720 1 226 1.4E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3112 32b399d2981f2b13f9f8fd4246b03a42 285 SUPERFAMILY SSF51735 1 283 9.05E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3112 32b399d2981f2b13f9f8fd4246b03a42 285 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 1.2E-26 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO3112 32b399d2981f2b13f9f8fd4246b03a42 285 PANTHER PTHR10366:SF466 2 284 4.8E-29 T 22-04-2016 YPO3112 32b399d2981f2b13f9f8fd4246b03a42 285 Gene3D G3DSA:3.90.25.10 227 275 1.2E-6 T 22-04-2016 YPO3112 32b399d2981f2b13f9f8fd4246b03a42 285 PANTHER PTHR10366 2 284 4.8E-29 T 22-04-2016 YPO0369 4bd9c786e7b6cecb4f51ce9c569acf13 156 SUPERFAMILY SSF52540 29 148 1.9E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0369 4bd9c786e7b6cecb4f51ce9c569acf13 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 132 3.4E-41 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YPO0369 4bd9c786e7b6cecb4f51ce9c569acf13 156 PANTHER PTHR33540 1 156 3.1E-54 T 22-04-2016 YPO0369 4bd9c786e7b6cecb4f51ce9c569acf13 156 Gene3D G3DSA:3.40.50.300 3 151 7.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0369 4bd9c786e7b6cecb4f51ce9c569acf13 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 3.2E-51 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YPO0939 b7602887d5e61b5569c51013b92a5d08 371 Gene3D G3DSA:3.75.10.10 15 370 6.8E-144 T 22-04-2016 YPO0939 b7602887d5e61b5569c51013b92a5d08 371 Hamap MF_01841 Agmatine deiminase [aguA]. 15 370 59.51 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YPO0939 b7602887d5e61b5569c51013b92a5d08 371 PANTHER PTHR31377:SF0 5 370 1.6E-190 T 22-04-2016 YPO0939 b7602887d5e61b5569c51013b92a5d08 371 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 16 370 1.1E-175 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YPO0939 b7602887d5e61b5569c51013b92a5d08 371 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 24 369 4.4E-121 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YPO0939 b7602887d5e61b5569c51013b92a5d08 371 PANTHER PTHR31377 5 370 1.6E-190 T 22-04-2016 YPO0939 b7602887d5e61b5569c51013b92a5d08 371 SUPERFAMILY SSF55909 13 370 3.03E-139 T 22-04-2016 YPO2228 202c4fc0f1517cfe529368cb70281105 108 Pfam PF01253 Translation initiation factor SUI1 32 101 6.2E-20 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 YPO2228 202c4fc0f1517cfe529368cb70281105 108 SUPERFAMILY SSF55159 5 104 6.02E-27 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 YPO2228 202c4fc0f1517cfe529368cb70281105 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 1.2E-38 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 YPO2228 202c4fc0f1517cfe529368cb70281105 108 PIRSF PIRSF037511 1 108 8.3E-36 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 YPO2228 202c4fc0f1517cfe529368cb70281105 108 Gene3D G3DSA:3.30.780.10 28 108 6.4E-35 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 YPO2228 202c4fc0f1517cfe529368cb70281105 108 PANTHER PTHR12789 1 108 2.2E-42 T 22-04-2016 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 Gene3D G3DSA:1.10.10.10 224 282 5.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 Pfam PF04545 Sigma-70, region 4 229 280 3.6E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.404 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 280 3.6E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 SUPERFAMILY SSF88659 200 284 6.35E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 Gene3D G3DSA:1.10.601.10 15 122 1.2E-33 T 22-04-2016 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 PANTHER PTHR30376 2 284 2.1E-129 T 22-04-2016 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 PIRSF PIRSF000770 5 285 4.3E-32 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 4.2E-7 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 SUPERFAMILY SSF88946 12 122 2.98E-39 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 Pfam PF04542 Sigma-70 region 2 53 122 1.5E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 1.1E-129 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3811 e6c92e9866a4ea59bb415044653d9d00 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 Gene3D G3DSA:3.30.1110.10 45 95 1.1E-6 T 22-04-2016 YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584 17 293 1.6E-207 T 22-04-2016 YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584 332 376 1.6E-207 T 22-04-2016 YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584 393 434 1.6E-207 T 22-04-2016 YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 Pfam PF00294 pfkB family carbohydrate kinase 138 297 6.0E-9 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 Gene3D G3DSA:3.40.1190.20 337 434 3.8E-47 T 22-04-2016 IPR029056 Ribokinase-like YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 Gene3D G3DSA:3.40.1190.20 96 298 3.8E-47 T 22-04-2016 IPR029056 Ribokinase-like YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 SUPERFAMILY SSF53613 36 305 2.96E-45 T 22-04-2016 IPR029056 Ribokinase-like YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 SUPERFAMILY SSF53613 338 416 2.96E-45 T 22-04-2016 IPR029056 Ribokinase-like YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584:SF202 17 293 1.6E-207 T 22-04-2016 YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584:SF202 332 376 1.6E-207 T 22-04-2016 YPO3095 7e6a1fcc893783cdb8f7ace4dcdde07d 434 PANTHER PTHR10584:SF202 393 434 1.6E-207 T 22-04-2016 YPO3579 ba3117c6cedc25cad18af00d79987cd0 187 PANTHER PTHR37481:SF1 2 187 2.6E-70 T 22-04-2016 YPO3579 ba3117c6cedc25cad18af00d79987cd0 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 184 2.6E-52 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related YPO3579 ba3117c6cedc25cad18af00d79987cd0 187 PIRSF PIRSF028513 1 187 2.6E-41 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YPO3579 ba3117c6cedc25cad18af00d79987cd0 187 PANTHER PTHR37481 2 187 2.6E-70 T 22-04-2016 YPO3579 ba3117c6cedc25cad18af00d79987cd0 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 183 3.4E-54 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YPO3579 ba3117c6cedc25cad18af00d79987cd0 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.338 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YPO0280 57086288f292ae1d29412d7fcd401580 334 Gene3D G3DSA:1.10.3470.10 7 331 5.2E-108 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO0280 57086288f292ae1d29412d7fcd401580 334 SUPERFAMILY SSF81345 5 327 4.84E-87 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO0280 57086288f292ae1d29412d7fcd401580 334 Pfam PF01032 FecCD transport family 17 327 4.1E-94 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO0280 57086288f292ae1d29412d7fcd401580 334 PANTHER PTHR30472 4 333 4.1E-162 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YPO0280 57086288f292ae1d29412d7fcd401580 334 PANTHER PTHR30472:SF3 4 333 4.1E-162 T 22-04-2016 YPO0711 b79c9ec1a35e62babee6ad8e000c31ef 303 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 229 287 2.0E-7 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO0711 b79c9ec1a35e62babee6ad8e000c31ef 303 Gene3D G3DSA:2.30.330.10 222 260 8.8E-5 T 22-04-2016 YPO0711 b79c9ec1a35e62babee6ad8e000c31ef 303 SUPERFAMILY SSF101801 226 288 1.7E-6 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO2088 4fed4df7f7fae8b8a05f8d66bcc3aa5f 214 PANTHER PTHR30481 1 176 1.9E-19 T 22-04-2016 YPO2088 4fed4df7f7fae8b8a05f8d66bcc3aa5f 214 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 84 158 2.6E-4 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YPO2088 4fed4df7f7fae8b8a05f8d66bcc3aa5f 214 SUPERFAMILY SSF53335 2 204 3.41E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2088 4fed4df7f7fae8b8a05f8d66bcc3aa5f 214 Gene3D G3DSA:3.40.50.150 78 187 2.7E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2088 4fed4df7f7fae8b8a05f8d66bcc3aa5f 214 PANTHER PTHR30481:SF4 1 176 1.9E-19 T 22-04-2016 YPO0212 ca36d1e45dec6dd380e0b0a233ad91d0 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site YPO0212 ca36d1e45dec6dd380e0b0a233ad91d0 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 23.063 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YPO0212 ca36d1e45dec6dd380e0b0a233ad91d0 100 Gene3D G3DSA:3.30.70.330 6 98 4.2E-35 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 YPO0212 ca36d1e45dec6dd380e0b0a233ad91d0 100 PANTHER PTHR11620 9 95 1.6E-34 T 22-04-2016 YPO0212 ca36d1e45dec6dd380e0b0a233ad91d0 100 Pfam PF00276 Ribosomal protein L23 9 95 4.1E-32 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YPO0212 ca36d1e45dec6dd380e0b0a233ad91d0 100 SUPERFAMILY SSF54189 3 92 5.76E-31 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3033 f3e20469bb3c9a9ab266aca5deed9ecb 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 6.3E-51 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 YPO3033 f3e20469bb3c9a9ab266aca5deed9ecb 152 PANTHER PTHR35146 1 152 9.7E-64 T 22-04-2016 YPO3033 f3e20469bb3c9a9ab266aca5deed9ecb 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.028 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 YPO3033 f3e20469bb3c9a9ab266aca5deed9ecb 152 PANTHER PTHR35146:SF1 1 152 9.7E-64 T 22-04-2016 YPO2680 4a69e4dbf4df20c501ae363367f193bd 115 SUPERFAMILY SSF46973 16 113 1.44E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2680 4a69e4dbf4df20c501ae363367f193bd 115 Gene3D G3DSA:1.20.58.80 15 115 1.7E-40 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2680 4a69e4dbf4df20c501ae363367f193bd 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 20 112 3.6E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2680 4a69e4dbf4df20c501ae363367f193bd 115 PANTHER PTHR34382 8 115 3.0E-54 T 22-04-2016 YPO2680 4a69e4dbf4df20c501ae363367f193bd 115 PANTHER PTHR34382:SF2 8 115 3.0E-54 T 22-04-2016 YPO2680 4a69e4dbf4df20c501ae363367f193bd 115 PIRSF PIRSF000699 10 115 4.7E-38 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 PANTHER PTHR31964 244 318 1.2E-78 T 22-04-2016 YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 PANTHER PTHR31964 1 88 1.2E-78 T 22-04-2016 YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 Gene3D G3DSA:3.40.50.620 143 303 2.2E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 Gene3D G3DSA:3.40.50.620 2 142 6.8E-26 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 SUPERFAMILY SSF52402 4 152 7.87E-28 T 22-04-2016 YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 SUPERFAMILY SSF52402 156 305 5.11E-24 T 22-04-2016 YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 PANTHER PTHR31964:SF41 244 318 1.2E-78 T 22-04-2016 YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 PANTHER PTHR31964:SF41 1 88 1.2E-78 T 22-04-2016 YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 Pfam PF00582 Universal stress protein family 174 300 1.3E-12 T 22-04-2016 IPR006016 UspA GO:0006950 YPO2301 c0da8f83ed281e78bca5f5383e257fb3 318 Pfam PF00582 Universal stress protein family 4 146 5.0E-19 T 22-04-2016 IPR006016 UspA GO:0006950 YPO2431 3900421b7bba8c1069ad460262660cfa 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.039 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPO2431 3900421b7bba8c1069ad460262660cfa 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.5E-26 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPO2431 3900421b7bba8c1069ad460262660cfa 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO2431 3900421b7bba8c1069ad460262660cfa 65 PANTHER PTHR33343 1 65 1.7E-28 T 22-04-2016 YPO2431 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.2E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPO2431 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.2E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPO2431 3900421b7bba8c1069ad460262660cfa 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.2E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YPO2431 3900421b7bba8c1069ad460262660cfa 65 SUPERFAMILY SSF143034 2 64 1.44E-22 T 22-04-2016 YPO2431 3900421b7bba8c1069ad460262660cfa 65 Pfam PF01632 Ribosomal protein L35 2 60 2.5E-23 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0312 880f19737f3d3305799e34a1049f6138 825 Pfam PF01553 Acyltransferase 281 423 3.5E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPO0312 880f19737f3d3305799e34a1049f6138 825 PANTHER PTHR12563 1 117 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPO0312 880f19737f3d3305799e34a1049f6138 825 PANTHER PTHR12563 143 812 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPO0312 880f19737f3d3305799e34a1049f6138 825 PIRSF PIRSF500064 2 815 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPO0312 880f19737f3d3305799e34a1049f6138 825 SMART SM00563 299 426 7.4E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPO0312 880f19737f3d3305799e34a1049f6138 825 PANTHER PTHR12563:SF14 1 117 0.0 T 22-04-2016 YPO0312 880f19737f3d3305799e34a1049f6138 825 PANTHER PTHR12563:SF14 143 812 0.0 T 22-04-2016 YPO0312 880f19737f3d3305799e34a1049f6138 825 PIRSF PIRSF000437 19 812 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPO0312 880f19737f3d3305799e34a1049f6138 825 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 806 32.578 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPO0312 880f19737f3d3305799e34a1049f6138 825 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 798 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YPO0312 880f19737f3d3305799e34a1049f6138 825 SUPERFAMILY SSF69593 246 487 9.15E-25 T 22-04-2016 YPO0618 4d61e68a9bedfb3be8bb42b33b01a863 589 PANTHER PTHR30509 1 589 3.1E-295 T 22-04-2016 YPO0618 4d61e68a9bedfb3be8bb42b33b01a863 589 PANTHER PTHR30509:SF3 1 589 3.1E-295 T 22-04-2016 YPO0618 4d61e68a9bedfb3be8bb42b33b01a863 589 Pfam PF04632 Fusaric acid resistance protein family 237 480 1.8E-25 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Gene3D G3DSA:1.10.150.240 19 68 1.4E-5 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Gene3D G3DSA:3.40.50.1000 90 185 7.1E-36 T 22-04-2016 IPR023214 HAD-like domain YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Gene3D G3DSA:3.40.50.1000 5 18 7.1E-36 T 22-04-2016 IPR023214 HAD-like domain YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PANTHER PTHR18901 1 186 1.2E-74 T 22-04-2016 YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 7.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 7.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 183 5.8E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 9.3E-59 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 PANTHER PTHR18901:SF29 1 186 1.2E-74 T 22-04-2016 YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 3.1E-30 T 22-04-2016 IPR023214 HAD-like domain YPO3303 978a9f3cc4cc77d2966a9b87f37d3c0e 188 SUPERFAMILY SSF56784 5 185 3.2E-44 T 22-04-2016 IPR023214 HAD-like domain YPO1301 9991e3c8c8b813deba1212e854329697 214 Gene3D G3DSA:1.10.10.10 6 93 8.3E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1301 9991e3c8c8b813deba1212e854329697 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 20 91 6.7E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO1301 9991e3c8c8b813deba1212e854329697 214 SMART SM00862 18 92 1.5E-8 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO1301 9991e3c8c8b813deba1212e854329697 214 SUPERFAMILY SSF46894 6 92 5.39E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 1.4E-27 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 Pfam PF00700 Bacterial flagellin C-terminal helical region 319 401 8.4E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 SUPERFAMILY SSF64518 1 403 4.32E-70 T 22-04-2016 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 Gene3D G3DSA:1.20.1330.10 58 174 4.4E-35 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 Gene3D G3DSA:1.20.1330.10 305 358 4.4E-35 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 PRINTS PR00207 Flagellin signature 76 95 3.3E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 PRINTS PR00207 Flagellin signature 37 54 3.3E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 PRINTS PR00207 Flagellin signature 111 134 3.3E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 PANTHER PTHR30244:SF1 2 172 2.7E-123 T 22-04-2016 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 PANTHER PTHR30244:SF1 219 403 2.7E-123 T 22-04-2016 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 PANTHER PTHR30244 2 172 2.7E-123 T 22-04-2016 YPO0737 da9302cc9fec5c7c771615e0d484d37c 404 PANTHER PTHR30244 219 403 2.7E-123 T 22-04-2016 YPO0222a d1e71548dbace9030783e0f6be326d92 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 YPO0222a d1e71548dbace9030783e0f6be326d92 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.6E-26 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0222a d1e71548dbace9030783e0f6be326d92 101 PANTHER PTHR19836 1 101 4.3E-60 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0222a d1e71548dbace9030783e0f6be326d92 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.761 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid YPO0222a d1e71548dbace9030783e0f6be326d92 101 Gene3D G3DSA:4.10.830.10 41 101 1.8E-31 T 22-04-2016 YPO0222a d1e71548dbace9030783e0f6be326d92 101 SUPERFAMILY SSF57716 2 101 1.14E-36 T 22-04-2016 YPMT1.49Ac e987b29fd5f92965d31fedb768ff88ca 66 PANTHER PTHR21262:SF0 2 66 7.3E-30 T 22-04-2016 YPMT1.49Ac e987b29fd5f92965d31fedb768ff88ca 66 Gene3D G3DSA:3.10.20.30 2 37 2.7E-10 T 22-04-2016 IPR012675 Beta-grasp domain YPMT1.49Ac e987b29fd5f92965d31fedb768ff88ca 66 PANTHER PTHR21262 2 66 7.3E-30 T 22-04-2016 YPMT1.49Ac e987b29fd5f92965d31fedb768ff88ca 66 SUPERFAMILY SSF81271 2 36 4.58E-8 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YPMT1.49Ac e987b29fd5f92965d31fedb768ff88ca 66 Pfam PF02824 TGS domain 2 36 1.8E-9 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YPO3539 0a784ffdf5113f66e902cce07d92495a 130 PANTHER PTHR21011 1 130 2.3E-50 T 22-04-2016 YPO3539 0a784ffdf5113f66e902cce07d92495a 130 Pfam PF01250 Ribosomal protein S6 3 91 8.3E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO3539 0a784ffdf5113f66e902cce07d92495a 130 SUPERFAMILY SSF54995 1 103 1.83E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO3539 0a784ffdf5113f66e902cce07d92495a 130 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 22-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO3539 0a784ffdf5113f66e902cce07d92495a 130 Gene3D G3DSA:3.30.70.60 1 103 4.9E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YPO3539 0a784ffdf5113f66e902cce07d92495a 130 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.959 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO3539 0a784ffdf5113f66e902cce07d92495a 130 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.0E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO3539 0a784ffdf5113f66e902cce07d92495a 130 PANTHER PTHR21011:SF1 1 130 2.3E-50 T 22-04-2016 YPO0822 4022be5deff6efccc5c52c4088b43e3c 316 Gene3D G3DSA:2.40.160.40 38 316 8.1E-47 T 22-04-2016 YPO0822 4022be5deff6efccc5c52c4088b43e3c 316 Pfam PF16946 Putative OMPG-porin 1 family 131 316 3.6E-9 T 22-04-2016 IPR031605 Putative OMPG-porin 1 family YPO2801 e04023b866ed1d90f6d14c536fb8143d 735 Pfam PF14351 Domain of unknown function (DUF4401) 394 724 8.8E-53 T 22-04-2016 IPR025513 Domain of unknown function DUF4401 YPO2801 e04023b866ed1d90f6d14c536fb8143d 735 Pfam PF09925 Predicted membrane protein (DUF2157) 29 164 1.2E-27 T 22-04-2016 IPR018677 Domain of unknown function DUF2157 YPO0823 d4fd8a887586edffa0ce34998d3d472f 728 SUPERFAMILY SSF103515 420 728 2.88E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0823 d4fd8a887586edffa0ce34998d3d472f 728 Gene3D G3DSA:2.40.128.130 420 728 2.7E-48 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0823 d4fd8a887586edffa0ce34998d3d472f 728 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 355 713 3.3E-14 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YPO0823 d4fd8a887586edffa0ce34998d3d472f 728 SMART SM00869 447 718 1.1E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0823 d4fd8a887586edffa0ce34998d3d472f 728 Pfam PF03797 Autotransporter beta-domain 446 712 7.4E-47 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO2968 45508cd72ace3a78e7b2d84b6a67379f 221 Gene3D G3DSA:1.10.3480.10 30 221 3.2E-46 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPO2968 45508cd72ace3a78e7b2d84b6a67379f 221 Pfam PF02613 Nitrate reductase delta subunit 69 177 7.9E-19 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPO2968 45508cd72ace3a78e7b2d84b6a67379f 221 PIRSF PIRSF004690 25 221 1.1E-36 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type YPO2968 45508cd72ace3a78e7b2d84b6a67379f 221 SUPERFAMILY SSF89155 28 220 3.66E-48 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YPO2968 45508cd72ace3a78e7b2d84b6a67379f 221 PANTHER PTHR34227:SF3 17 221 4.7E-136 T 22-04-2016 YPO2968 45508cd72ace3a78e7b2d84b6a67379f 221 PANTHER PTHR34227 17 221 4.7E-136 T 22-04-2016 YPO2475 f290d5eacfb6173ac8d898a7cb02c114 274 Gene3D G3DSA:1.10.3720.10 3 263 1.7E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2475 f290d5eacfb6173ac8d898a7cb02c114 274 SUPERFAMILY SSF161098 2 270 4.21E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2475 f290d5eacfb6173ac8d898a7cb02c114 274 PANTHER PTHR32243:SF35 1 272 1.6E-186 T 22-04-2016 YPO2475 f290d5eacfb6173ac8d898a7cb02c114 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 269 1.9E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2475 f290d5eacfb6173ac8d898a7cb02c114 274 PANTHER PTHR32243 1 272 1.6E-186 T 22-04-2016 YPO0353 21728fdae55c41f24a5710390c70273f 342 Pfam PF13353 4Fe-4S single cluster domain 111 182 3.6E-6 T 22-04-2016 YPO0353 21728fdae55c41f24a5710390c70273f 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 4 328 1.2E-132 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YPO0353 21728fdae55c41f24a5710390c70273f 342 PIRSF PIRSF004911 3 342 2.1E-117 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YPO0353 21728fdae55c41f24a5710390c70273f 342 Gene3D G3DSA:3.20.20.70 105 312 3.6E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0353 21728fdae55c41f24a5710390c70273f 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 8.2E-157 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like YPO0353 21728fdae55c41f24a5710390c70273f 342 PANTHER PTHR30538:SF1 8 342 3.8E-145 T 22-04-2016 YPO0353 21728fdae55c41f24a5710390c70273f 342 PANTHER PTHR30538 8 342 3.8E-145 T 22-04-2016 YPO0353 21728fdae55c41f24a5710390c70273f 342 Pfam PF04055 Radical SAM superfamily 118 199 1.9E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO0353 21728fdae55c41f24a5710390c70273f 342 SUPERFAMILY SSF102114 102 324 8.5E-26 T 22-04-2016 YPO3339 04496d2ff4447d138832e930846f886f 395 Pfam PF07906 ShET2 enterotoxin, N-terminal region 10 280 4.1E-106 T 22-04-2016 IPR012927 ShET2 enterotoxin, N-terminal YPO3313 6929a733605e7d76e14bf7523e868cb6 314 Gene3D G3DSA:3.40.50.970 21 181 7.9E-39 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3313 6929a733605e7d76e14bf7523e868cb6 314 PANTHER PTHR11624 41 310 2.3E-77 T 22-04-2016 IPR033247 Transketolase family YPO3313 6929a733605e7d76e14bf7523e868cb6 314 Pfam PF02780 Transketolase, C-terminal domain 181 303 4.4E-29 T 22-04-2016 IPR033248 Transketolase, C-terminal domain YPO3313 6929a733605e7d76e14bf7523e868cb6 314 Pfam PF02779 Transketolase, pyrimidine binding domain 44 167 2.2E-18 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPO3313 6929a733605e7d76e14bf7523e868cb6 314 SUPERFAMILY SSF52922 176 311 1.2E-31 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO3313 6929a733605e7d76e14bf7523e868cb6 314 SMART SM00861 1 171 7.2E-30 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YPO3313 6929a733605e7d76e14bf7523e868cb6 314 PANTHER PTHR11624:SF2 41 310 2.3E-77 T 22-04-2016 YPO3313 6929a733605e7d76e14bf7523e868cb6 314 SUPERFAMILY SSF52518 6 173 3.93E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO3313 6929a733605e7d76e14bf7523e868cb6 314 Gene3D G3DSA:3.40.50.920 182 310 9.5E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 164 190 2.1E-35 T 22-04-2016 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 267 321 2.1E-35 T 22-04-2016 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.1E-170 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 22-04-2016 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 PANTHER PTHR19375 9 336 1.5E-190 T 22-04-2016 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 Pfam PF06723 MreB/Mbl protein 11 338 9.6E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.90.640.10 191 263 6.8E-30 T 22-04-2016 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 PANTHER PTHR19375:SF117 9 336 1.5E-190 T 22-04-2016 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 9 163 1.8E-46 T 22-04-2016 YPO3665 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 153 340 4.08E-50 T 22-04-2016 YPO0917 286621aa463934aec54157559c120425 259 PANTHER PTHR34387 6 246 1.5E-65 T 22-04-2016 YPO0917 286621aa463934aec54157559c120425 259 Pfam PF04402 Protein of unknown function (DUF541) 36 237 1.9E-43 T 22-04-2016 IPR007497 Protein of unknown function DUF541 YPO0917 286621aa463934aec54157559c120425 259 PANTHER PTHR34387:SF1 6 246 1.5E-65 T 22-04-2016 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PANTHER PTHR34217 1 499 9.5E-275 T 22-04-2016 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PANTHER PTHR34217:SF1 1 499 9.5E-275 T 22-04-2016 YPO2310 b01eb133949cd332fc0114e2224084c5 499 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 498 1.2E-94 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 450 468 3.8E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 405 426 3.8E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 151 171 3.8E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 268 287 3.8E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 335 354 3.8E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 248 267 3.8E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 295 311 3.8E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPO2310 b01eb133949cd332fc0114e2224084c5 499 PIRSF PIRSF006615 1 499 8.3E-203 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YPO2310 b01eb133949cd332fc0114e2224084c5 499 SUPERFAMILY SSF55486 3 499 8.79E-124 T 22-04-2016 YPO4054 24f02231c8d7dbe06f815dfef19e0f8e 462 PANTHER PTHR32328:SF0 2 453 7.0E-259 T 22-04-2016 YPO4054 24f02231c8d7dbe06f815dfef19e0f8e 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 9 459 1.3E-185 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YPO4054 24f02231c8d7dbe06f815dfef19e0f8e 462 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.1E-9 T 22-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YPO4054 24f02231c8d7dbe06f815dfef19e0f8e 462 SUPERFAMILY SSF53383 72 347 1.1E-43 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO4054 24f02231c8d7dbe06f815dfef19e0f8e 462 PANTHER PTHR32328 2 453 7.0E-259 T 22-04-2016 YPO4054 24f02231c8d7dbe06f815dfef19e0f8e 462 Pfam PF03841 L-seryl-tRNA selenium transferase 82 450 1.7E-170 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YPO4054 24f02231c8d7dbe06f815dfef19e0f8e 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 246.813 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YPO4054 24f02231c8d7dbe06f815dfef19e0f8e 462 Gene3D G3DSA:3.40.640.10 132 317 2.2E-30 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO3330 2618a8bc3739c9b619dc71dea4518318 504 SUPERFAMILY SSF52540 12 239 1.43E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3330 2618a8bc3739c9b619dc71dea4518318 504 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3330 2618a8bc3739c9b619dc71dea4518318 504 Gene3D G3DSA:3.40.50.300 12 241 1.3E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3330 2618a8bc3739c9b619dc71dea4518318 504 PANTHER PTHR24220 15 388 3.1E-242 T 22-04-2016 YPO3330 2618a8bc3739c9b619dc71dea4518318 504 SMART SM00382 38 228 2.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3330 2618a8bc3739c9b619dc71dea4518318 504 SMART SM00382 288 483 0.072 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3330 2618a8bc3739c9b619dc71dea4518318 504 SUPERFAMILY SSF52540 268 493 1.07E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3330 2618a8bc3739c9b619dc71dea4518318 504 Pfam PF00005 ABC transporter 29 180 6.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3330 2618a8bc3739c9b619dc71dea4518318 504 Pfam PF00005 ABC transporter 280 434 3.7E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3330 2618a8bc3739c9b619dc71dea4518318 504 Gene3D G3DSA:3.40.50.300 265 497 2.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3330 2618a8bc3739c9b619dc71dea4518318 504 PANTHER PTHR24220:SF538 15 388 3.1E-242 T 22-04-2016 YPO1707 d16741b0b882e8d741ad380e2af2279f 180 SUPERFAMILY SSF49401 28 180 6.96E-26 T 22-04-2016 IPR008966 Adhesion domain YPO1707 d16741b0b882e8d741ad380e2af2279f 180 Gene3D G3DSA:2.60.40.1090 27 179 8.5E-28 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO1707 d16741b0b882e8d741ad380e2af2279f 180 PANTHER PTHR33420:SF3 2 180 1.2E-62 T 22-04-2016 YPO1707 d16741b0b882e8d741ad380e2af2279f 180 Pfam PF16970 Type-1 fimbrial protein, A 55 180 2.4E-19 T 22-04-2016 YPO1707 d16741b0b882e8d741ad380e2af2279f 180 PANTHER PTHR33420 2 180 1.2E-62 T 22-04-2016 YPO0021 81b28954565799b38ad25cc3f949d446 457 SMART SM00729 52 272 3.7E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPO0021 81b28954565799b38ad25cc3f949d446 457 Pfam PF04055 Radical SAM superfamily 57 226 3.0E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO0021 81b28954565799b38ad25cc3f949d446 457 Pfam PF06969 HemN C-terminal domain 364 431 1.6E-11 T 22-04-2016 IPR010723 HemN, C-terminal YPO0021 81b28954565799b38ad25cc3f949d446 457 PANTHER PTHR13932:SF6 1 451 5.5E-269 T 22-04-2016 YPO0021 81b28954565799b38ad25cc3f949d446 457 PANTHER PTHR13932 1 451 5.5E-269 T 22-04-2016 YPO0021 81b28954565799b38ad25cc3f949d446 457 Gene3D G3DSA:3.80.30.20 53 276 4.5E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPO0021 81b28954565799b38ad25cc3f949d446 457 PIRSF PIRSF000167 4 454 5.3E-174 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 YPO0021 81b28954565799b38ad25cc3f949d446 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 7.6E-219 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 YPO0021 81b28954565799b38ad25cc3f949d446 457 SUPERFAMILY SSF102114 6 444 7.98E-146 T 22-04-2016 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 Gene3D G3DSA:3.90.480.10 342 423 2.8E-63 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 Gene3D G3DSA:3.90.480.10 74 146 2.8E-63 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 478 494 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 SUPERFAMILY SSF55124 346 424 7.2E-22 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 559 2.8E-289 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 SUPERFAMILY SSF56014 150 344 3.66E-58 T 22-04-2016 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 Gene3D G3DSA:3.30.413.10 431 558 4.2E-34 T 22-04-2016 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 Gene3D G3DSA:3.30.413.10 150 339 1.8E-69 T 22-04-2016 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 571 58.288 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 SUPERFAMILY SSF56014 429 561 1.57E-34 T 22-04-2016 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 PRINTS PR00397 Sirohaem Fe-binding site signature 478 496 2.7E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 2.7E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 558 0.0054 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 329 2.8E-46 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 7.7E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 2.9E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 PANTHER PTHR11493 1 560 3.3E-278 T 22-04-2016 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 SUPERFAMILY SSF55124 13 142 3.27E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YPO3371 c1acc266289fedb1c7214df97c9ca213 576 PANTHER PTHR11493:SF47 1 560 3.3E-278 T 22-04-2016 YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 Gene3D G3DSA:3.40.50.1000 1 72 4.1E-48 T 22-04-2016 IPR023214 HAD-like domain YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 Gene3D G3DSA:3.40.50.1000 175 263 4.1E-48 T 22-04-2016 IPR023214 HAD-like domain YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 PANTHER PTHR10000:SF21 1 264 7.5E-200 T 22-04-2016 YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 273 66.384 T 22-04-2016 IPR023938 HMP-PP phosphatase GO:0016818 YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 Gene3D G3DSA:3.30.1240.10 83 174 1.9E-14 T 22-04-2016 YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 5.9E-54 T 22-04-2016 IPR023214 HAD-like domain YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 22-04-2016 YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 2.8E-34 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.6E-54 T 22-04-2016 IPR000150 Cof protein GO:0016787 YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 PANTHER PTHR10000 1 264 7.5E-200 T 22-04-2016 YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YPO3148 3ece99df4ab6998ff59da69adb16ae16 273 SUPERFAMILY SSF56784 1 262 1.28E-62 T 22-04-2016 IPR023214 HAD-like domain YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.0E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 PANTHER PTHR11700 1 102 1.1E-55 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YPO0209 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 8.7E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 Pfam PF13488 Glycine zipper 38 85 2.8E-11 T 22-04-2016 YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 Gene3D G3DSA:3.30.1330.60 96 216 5.1E-38 T 22-04-2016 IPR006665 OmpA-like domain YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 SUPERFAMILY SSF103088 103 218 6.15E-37 T 22-04-2016 IPR006665 OmpA-like domain YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 PANTHER PTHR30128 13 219 8.4E-74 T 22-04-2016 YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 2.4E-5 T 22-04-2016 YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 2.4E-5 T 22-04-2016 YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 2.4E-5 T 22-04-2016 YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01021 OMPA domain signature 116 138 5.0E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01021 OMPA domain signature 146 161 5.0E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 PRINTS PR01021 OMPA domain signature 161 177 5.0E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO4076 6c785211c6df1d2a6d015a9d548ff633 219 Pfam PF00691 OmpA family 115 210 3.2E-21 T 22-04-2016 IPR006665 OmpA-like domain YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 SUPERFAMILY SSF53850 117 550 1.99E-65 T 22-04-2016 YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 SUPERFAMILY SSF46785 4 56 4.71E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 Gene3D G3DSA:3.90.76.10 131 266 3.6E-21 T 22-04-2016 YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 PANTHER PTHR30290 119 552 6.6E-216 T 22-04-2016 YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 PANTHER PTHR30290 22 81 6.6E-216 T 22-04-2016 YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 PANTHER PTHR30290:SF30 119 552 6.6E-216 T 22-04-2016 YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 PANTHER PTHR30290:SF30 22 81 6.6E-216 T 22-04-2016 YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 1.5E-17 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 1.7E-42 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 553 69.312 T 22-04-2016 IPR023767 Transcriptional regulator SgrR YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 Gene3D G3DSA:3.40.190.10 267 308 1.2E-5 T 22-04-2016 YPO0524 a9581d009134dbf72a0cbb3d472ed37e 553 Gene3D G3DSA:1.10.10.10 4 56 3.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1133 6b0446fb5ba0fc12a1c416885e5ea31b 250 Gene3D G3DSA:3.40.50.1240 2 250 1.5E-97 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO1133 6b0446fb5ba0fc12a1c416885e5ea31b 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 YPO1133 6b0446fb5ba0fc12a1c416885e5ea31b 250 SMART SM00855 5 191 9.7E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPO1133 6b0446fb5ba0fc12a1c416885e5ea31b 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 1.8E-126 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 YPO1133 6b0446fb5ba0fc12a1c416885e5ea31b 250 SUPERFAMILY SSF53254 4 247 3.3E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO1133 6b0446fb5ba0fc12a1c416885e5ea31b 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 128 2.4E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPO1133 6b0446fb5ba0fc12a1c416885e5ea31b 250 PANTHER PTHR11931 1 250 4.1E-170 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 YPO1133 6b0446fb5ba0fc12a1c416885e5ea31b 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.166 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 YPO1630 8a2e0d013fb43cb2e1fc91339f919712 278 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 269 60.146 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 YPO1630 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.30.1600.10 55 94 9.9E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain YPO1630 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.30.1600.10 147 191 9.9E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain YPO1630 8a2e0d013fb43cb2e1fc91339f919712 278 SUPERFAMILY SSF52467 41 267 1.37E-74 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO1630 8a2e0d013fb43cb2e1fc91339f919712 278 Pfam PF02146 Sir2 family 46 219 1.7E-50 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 YPO1630 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.40.50.1220 104 146 8.7E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO1630 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.40.50.1220 198 264 8.7E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO1630 8a2e0d013fb43cb2e1fc91339f919712 278 Gene3D G3DSA:3.40.50.1220 38 54 8.7E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO1630 8a2e0d013fb43cb2e1fc91339f919712 278 PANTHER PTHR11085 41 262 4.7E-81 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 YPO4014 20fcd76036fbbe3a42dfc359870c56ed 487 Gene3D G3DSA:3.40.50.1820 111 342 5.6E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO4014 20fcd76036fbbe3a42dfc359870c56ed 487 PANTHER PTHR11614:SF89 48 342 9.2E-132 T 22-04-2016 YPO4014 20fcd76036fbbe3a42dfc359870c56ed 487 SUPERFAMILY SSF53474 74 235 1.91E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO4014 20fcd76036fbbe3a42dfc359870c56ed 487 SUPERFAMILY SSF53474 302 342 1.91E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO4014 20fcd76036fbbe3a42dfc359870c56ed 487 Pfam PF12146 Serine aminopeptidase, S33 118 237 1.5E-10 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 YPO4014 20fcd76036fbbe3a42dfc359870c56ed 487 PANTHER PTHR11614 48 342 9.2E-132 T 22-04-2016 YPO3278 6d3b1670648edf151bb2419bd7b8bd10 243 Gene3D G3DSA:1.25.40.10 34 205 4.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3278 6d3b1670648edf151bb2419bd7b8bd10 243 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 1.2E-88 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD YPO3278 6d3b1670648edf151bb2419bd7b8bd10 243 SUPERFAMILY SSF48452 27 119 1.23E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3278 6d3b1670648edf151bb2419bd7b8bd10 243 PANTHER PTHR37423 1 242 5.9E-119 T 22-04-2016 YPO3278 6d3b1670648edf151bb2419bd7b8bd10 243 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 243 48.126 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD YPO3278 6d3b1670648edf151bb2419bd7b8bd10 243 Pfam PF13525 Outer membrane lipoprotein 28 236 6.3E-84 T 22-04-2016 YPO2081 0134cb9976300f8c18b92e98ed16af79 361 PANTHER PTHR30163:SF2 1 360 3.6E-162 T 22-04-2016 YPO2081 0134cb9976300f8c18b92e98ed16af79 361 PANTHER PTHR30163 1 360 3.6E-162 T 22-04-2016 IPR011757 Lytic transglycosylase MltB YPO2081 0134cb9976300f8c18b92e98ed16af79 361 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 63 360 1.8E-122 T 22-04-2016 IPR011970 Lytic murein transglycosylase YPO2081 0134cb9976300f8c18b92e98ed16af79 361 Gene3D G3DSA:1.10.530.10 108 164 5.5E-56 T 22-04-2016 YPO2081 0134cb9976300f8c18b92e98ed16af79 361 Gene3D G3DSA:1.10.530.10 245 360 5.5E-56 T 22-04-2016 YPO2081 0134cb9976300f8c18b92e98ed16af79 361 SUPERFAMILY SSF53955 53 359 3.52E-96 T 22-04-2016 IPR023346 Lysozyme-like domain YPO2081 0134cb9976300f8c18b92e98ed16af79 361 Pfam PF13406 Transglycosylase SLT domain 64 357 2.0E-105 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 6 153 9.9E-62 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 SMART SM00846 6 153 6.0E-98 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 SUPERFAMILY SSF55347 152 315 4.46E-81 T 22-04-2016 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 Gene3D G3DSA:3.30.360.10 162 317 3.0E-87 T 22-04-2016 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 7 327 5.7E-137 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 Gene3D G3DSA:3.40.50.720 3 161 4.5E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 PANTHER PTHR10836 3 334 2.9E-252 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 SUPERFAMILY SSF51735 6 169 2.5E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 PIRSF PIRSF000149 4 334 9.5E-135 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YPO2157 cc59cf5983df8e82f571ab2413c360c8 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 315 1.5E-71 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 Gene3D G3DSA:1.10.3080.10 27 452 9.4E-100 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 PANTHER PTHR11689 1 459 3.8E-221 T 22-04-2016 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 SUPERFAMILY SSF81340 23 453 8.5E-110 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 PANTHER PTHR11689:SF96 1 459 3.8E-221 T 22-04-2016 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 Pfam PF00654 Voltage gated chloride channel 90 437 3.4E-89 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 PRINTS PR00762 Chloride channel signature 102 119 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 PRINTS PR00762 Chloride channel signature 405 424 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 PRINTS PR00762 Chloride channel signature 387 403 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 PRINTS PR00762 Chloride channel signature 183 202 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 PRINTS PR00762 Chloride channel signature 352 372 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YPO3388 6b5bc3db33bd18f99c67779fdfdfc653 478 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 47.926 T 22-04-2016 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 YPO0476 864cfccf212ab4a1d71b979a3aae1660 169 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPO0476 864cfccf212ab4a1d71b979a3aae1660 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.049 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPO0476 864cfccf212ab4a1d71b979a3aae1660 169 PANTHER PTHR33695 9 169 9.6E-64 T 22-04-2016 YPO0476 864cfccf212ab4a1d71b979a3aae1660 169 Pfam PF01252 Signal peptidase (SPase) II 16 154 4.1E-36 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPO0476 864cfccf212ab4a1d71b979a3aae1660 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.6E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPO0476 864cfccf212ab4a1d71b979a3aae1660 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.6E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPO0476 864cfccf212ab4a1d71b979a3aae1660 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.6E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPO0476 864cfccf212ab4a1d71b979a3aae1660 169 PANTHER PTHR33695:SF1 9 169 9.6E-64 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPO0476 864cfccf212ab4a1d71b979a3aae1660 169 TIGRFAM TIGR00077 lspA: signal peptidase II 3 160 7.3E-51 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YPO2586 f4be85931355e9b67e46187db0af1c3c 306 Gene3D G3DSA:3.20.20.150 12 299 1.3E-76 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO2586 f4be85931355e9b67e46187db0af1c3c 306 PANTHER PTHR12110:SF4 16 306 5.8E-165 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 YPO2586 f4be85931355e9b67e46187db0af1c3c 306 PANTHER PTHR12110 16 306 5.8E-165 T 22-04-2016 YPO2586 f4be85931355e9b67e46187db0af1c3c 306 Pfam PF01261 Xylose isomerase-like TIM barrel 42 238 7.0E-23 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO2586 f4be85931355e9b67e46187db0af1c3c 306 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 13 299 5.8E-126 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 YPO2586 f4be85931355e9b67e46187db0af1c3c 306 SUPERFAMILY SSF51658 14 299 1.8E-53 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 152 170 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 128 151 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 73 94 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 108 125 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 PRINTS PR00721 Stomatin signature 171 192 2.0E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 Pfam PF01145 SPFH domain / Band 7 family 22 201 2.6E-31 T 22-04-2016 IPR001107 Band 7 domain YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 SMART SM00244 18 176 8.0E-59 T 22-04-2016 IPR001107 Band 7 domain YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 PANTHER PTHR10264:SF27 1 303 7.8E-125 T 22-04-2016 YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 SUPERFAMILY SSF117892 49 183 1.11E-40 T 22-04-2016 IPR001107 Band 7 domain YPO3083 c742e17a8d0fdf4bde1691e6c777e3ca 304 PANTHER PTHR10264 1 303 7.8E-125 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO1492 b49e3770ff2fa12afc7a17fa74ab184e 217 Pfam PF16809 NleF caspase inhibitor 56 207 1.7E-59 T 22-04-2016 IPR031829 Effector protein NleF YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 Gene3D G3DSA:1.20.1270.20 159 232 4.7E-24 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 Gene3D G3DSA:3.40.50.2030 234 379 1.4E-64 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 Gene3D G3DSA:1.20.1270.20 1 158 7.0E-37 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 PIRSF PIRSF000076 1 550 3.0E-241 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 SUPERFAMILY SSF56821 1 549 1.68E-188 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 2.2E-160 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 PANTHER PTHR30109 1 548 0.0 T 22-04-2016 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 Gene3D G3DSA:3.40.50.2030 380 547 3.6E-69 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 PANTHER PTHR30109:SF0 1 548 0.0 T 22-04-2016 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 3.5E-250 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YPO1360 b036a2b3c6b995a80ba98ce18f59749e 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.697 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 2.4E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 SUPERFAMILY SSF51569 7 335 1.42E-143 T 22-04-2016 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.4E-139 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 SMART SM01004 9 333 1.2E-239 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 PANTHER PTHR11458 1 340 1.3E-191 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 Gene3D G3DSA:3.20.20.70 9 336 6.8E-152 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 PIRSF PIRSF001415 2 336 4.4E-154 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO3771 1f36be251c3ea54df3195f90e5550a5b 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YPO0010 477c35b97dc77d15cc30cfd369500f69 229 SMART SM00345 18 77 9.3E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO0010 477c35b97dc77d15cc30cfd369500f69 229 SMART SM00895 106 227 5.0E-17 T 22-04-2016 IPR011711 GntR, C-terminal YPO0010 477c35b97dc77d15cc30cfd369500f69 229 PANTHER PTHR11751 104 122 9.7E-52 T 22-04-2016 YPO0010 477c35b97dc77d15cc30cfd369500f69 229 PANTHER PTHR11751 18 84 9.7E-52 T 22-04-2016 YPO0010 477c35b97dc77d15cc30cfd369500f69 229 SUPERFAMILY SSF48008 107 223 6.28E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO0010 477c35b97dc77d15cc30cfd369500f69 229 Pfam PF07729 FCD domain 110 222 9.4E-22 T 22-04-2016 IPR011711 GntR, C-terminal YPO0010 477c35b97dc77d15cc30cfd369500f69 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 77 4.0E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO0010 477c35b97dc77d15cc30cfd369500f69 229 SUPERFAMILY SSF46785 10 81 1.25E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0010 477c35b97dc77d15cc30cfd369500f69 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO0010 477c35b97dc77d15cc30cfd369500f69 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO0010 477c35b97dc77d15cc30cfd369500f69 229 Gene3D G3DSA:1.10.10.10 4 78 5.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0010 477c35b97dc77d15cc30cfd369500f69 229 Gene3D G3DSA:1.20.120.530 106 220 1.1E-18 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO0010 477c35b97dc77d15cc30cfd369500f69 229 PANTHER PTHR11751:SF408 104 122 9.7E-52 T 22-04-2016 YPO0010 477c35b97dc77d15cc30cfd369500f69 229 PANTHER PTHR11751:SF408 18 84 9.7E-52 T 22-04-2016 YPO1170 78324ccbc496634fb8cfdbafb8de582d 293 PANTHER PTHR12715:SF11 4 293 2.1E-73 T 22-04-2016 YPO1170 78324ccbc496634fb8cfdbafb8de582d 293 Pfam PF00892 EamA-like transporter family 156 288 1.3E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO1170 78324ccbc496634fb8cfdbafb8de582d 293 Pfam PF00892 EamA-like transporter family 10 140 1.2E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO1170 78324ccbc496634fb8cfdbafb8de582d 293 SUPERFAMILY SSF103481 188 290 2.88E-5 T 22-04-2016 YPO1170 78324ccbc496634fb8cfdbafb8de582d 293 PANTHER PTHR12715 4 293 2.1E-73 T 22-04-2016 YPO1170 78324ccbc496634fb8cfdbafb8de582d 293 SUPERFAMILY SSF103481 41 142 7.85E-11 T 22-04-2016 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.7E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 SUPERFAMILY SSF54913 1 112 2.13E-42 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 Gene3D G3DSA:3.30.70.120 1 112 4.3E-48 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 PANTHER PTHR30115 1 112 2.0E-83 T 22-04-2016 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 PANTHER PTHR30115:SF12 1 112 2.0E-83 T 22-04-2016 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 SMART SM00938 4 105 5.9E-61 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YPO3143 70eb157966fa0ccc6e1de75f03e8f716 112 PIRSF PIRSF039144 1 112 3.9E-53 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO0485 03946a470afce94987e1065fb13462da 153 Pfam PF12821 Threonine/Serine exporter, ThrE 12 143 2.8E-32 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE YPO0485 03946a470afce94987e1065fb13462da 153 PANTHER PTHR34390 1 153 1.3E-51 T 22-04-2016 YPO1269 c3f01d097f5f284d43fb9efa063f5b36 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 6.0E-63 T 22-04-2016 IPR020489 Uncharacterised protein family YejG YPO1269 c3f01d097f5f284d43fb9efa063f5b36 114 Pfam PF13989 YejG-like protein 4 108 2.2E-51 T 22-04-2016 IPR020489 Uncharacterised protein family YejG YPO3866 7f02db07b033e157312bd65ace417a45 365 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.608 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 YPO3866 7f02db07b033e157312bd65ace417a45 365 PANTHER PTHR22926:SF3 13 358 4.7E-113 T 22-04-2016 YPO3866 7f02db07b033e157312bd65ace417a45 365 Pfam PF00953 Glycosyl transferase family 4 75 232 1.0E-27 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO3866 7f02db07b033e157312bd65ace417a45 365 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 1.5E-164 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 YPO3866 7f02db07b033e157312bd65ace417a45 365 PANTHER PTHR22926 13 358 4.7E-113 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 PANTHER PTHR21152 3 361 1.7E-195 T 22-04-2016 YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 PIRSF PIRSF000525 1 361 1.5E-151 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 Gene3D G3DSA:3.90.1150.10 259 360 4.1E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 Gene3D G3DSA:3.40.640.10 17 258 2.1E-106 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 SUPERFAMILY SSF53383 1 359 9.18E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 PANTHER PTHR21152:SF1 3 361 1.7E-195 T 22-04-2016 YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 51.96 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 2.9E-157 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 YPO1389 7cacf04444e3037fcd46bd1e0164644b 361 Pfam PF00266 Aminotransferase class-V 4 349 3.6E-67 T 22-04-2016 IPR000192 Aminotransferase class V domain YPO0084 e319a233fc2c91d984040eb92c440b12 348 Pfam PF03466 LysR substrate binding domain 134 341 4.8E-29 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0084 e319a233fc2c91d984040eb92c440b12 348 Gene3D G3DSA:1.10.10.10 50 128 2.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0084 e319a233fc2c91d984040eb92c440b12 348 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 51 108 8.9E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0084 e319a233fc2c91d984040eb92c440b12 348 PANTHER PTHR30419:SF10 44 348 2.9E-162 T 22-04-2016 YPO0084 e319a233fc2c91d984040eb92c440b12 348 Gene3D G3DSA:3.40.190.10 135 224 5.8E-15 T 22-04-2016 YPO0084 e319a233fc2c91d984040eb92c440b12 348 PANTHER PTHR30419 44 348 2.9E-162 T 22-04-2016 YPO0084 e319a233fc2c91d984040eb92c440b12 348 SUPERFAMILY SSF46785 47 127 5.8E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0084 e319a233fc2c91d984040eb92c440b12 348 Gene3D G3DSA:3.40.190.10 225 304 1.3E-8 T 22-04-2016 YPO0084 e319a233fc2c91d984040eb92c440b12 348 SUPERFAMILY SSF53850 135 344 7.25E-35 T 22-04-2016 YPO1855 e7eaf0a71318d53a93fd37442a32afd8 376 Pfam PF09375 Imelysin 137 369 1.4E-45 T 22-04-2016 YPO1855 e7eaf0a71318d53a93fd37442a32afd8 376 Gene3D G3DSA:2.60.40.420 19 117 9.4E-6 T 22-04-2016 IPR008972 Cupredoxin YPO1855 e7eaf0a71318d53a93fd37442a32afd8 376 PANTHER PTHR39192 1 376 1.0E-176 T 22-04-2016 YPO1855 e7eaf0a71318d53a93fd37442a32afd8 376 SUPERFAMILY SSF49503 17 116 8.61E-7 T 22-04-2016 IPR008972 Cupredoxin YPO1855 e7eaf0a71318d53a93fd37442a32afd8 376 Pfam PF13473 Cupredoxin-like domain 13 116 2.2E-24 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain YPO0658 e508b5f5a872c6c13e818d4ac67eda8a 217 PANTHER PTHR21327 1 215 6.8E-163 T 22-04-2016 YPO0658 e508b5f5a872c6c13e818d4ac67eda8a 217 Gene3D G3DSA:3.90.870.10 11 214 8.9E-93 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPO0658 e508b5f5a872c6c13e818d4ac67eda8a 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 2.4E-82 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO0658 e508b5f5a872c6c13e818d4ac67eda8a 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 208 1.8E-79 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO0658 e508b5f5a872c6c13e818d4ac67eda8a 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 41.897 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO0658 e508b5f5a872c6c13e818d4ac67eda8a 217 PANTHER PTHR21327:SF15 1 215 6.8E-163 T 22-04-2016 YPO0658 e508b5f5a872c6c13e818d4ac67eda8a 217 SUPERFAMILY SSF55821 7 210 1.01E-84 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YPO1277 f19723bb7cd8c2a5dbd51e7f13d038ce 327 PANTHER PTHR13748 1 325 7.8E-87 T 22-04-2016 YPO1277 f19723bb7cd8c2a5dbd51e7f13d038ce 327 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 240 320 1.7E-5 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPO1277 f19723bb7cd8c2a5dbd51e7f13d038ce 327 Gene3D G3DSA:3.40.50.300 2 192 4.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1277 f19723bb7cd8c2a5dbd51e7f13d038ce 327 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 170 6.8E-40 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPO1277 f19723bb7cd8c2a5dbd51e7f13d038ce 327 SMART SM00833 239 322 0.0081 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPO1277 f19723bb7cd8c2a5dbd51e7f13d038ce 327 SUPERFAMILY SSF52540 6 167 8.21E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 2.8E-83 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 PANTHER PTHR33516 1 202 9.1E-108 T 22-04-2016 YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 SUPERFAMILY SSF46785 3 69 6.36E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 PANTHER PTHR33516:SF2 1 202 9.1E-108 T 22-04-2016 YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 SUPERFAMILY SSF51306 76 198 1.26E-38 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 7.4E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 7.4E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 7.4E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 Pfam PF01726 LexA DNA binding domain 1 65 2.5E-29 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.42 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 Gene3D G3DSA:2.10.109.10 76 198 2.3E-46 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 Gene3D G3DSA:1.10.10.10 1 69 9.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0314 24581eb8c2ba7bd79c5837445181b0d7 202 Pfam PF00717 Peptidase S24-like 114 179 4.4E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YPO3243 aa57b0a792ae74df1ba7ea2dbf6e2262 193 PANTHER PTHR30390:SF6 2 192 4.0E-96 T 22-04-2016 YPO3243 aa57b0a792ae74df1ba7ea2dbf6e2262 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 3.8E-83 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 YPO3243 aa57b0a792ae74df1ba7ea2dbf6e2262 193 Gene3D G3DSA:3.40.50.10490 1 190 1.9E-62 T 22-04-2016 YPO3243 aa57b0a792ae74df1ba7ea2dbf6e2262 193 SUPERFAMILY SSF53697 1 189 1.01E-51 T 22-04-2016 YPO3243 aa57b0a792ae74df1ba7ea2dbf6e2262 193 PANTHER PTHR30390 2 192 4.0E-96 T 22-04-2016 YPO3243 aa57b0a792ae74df1ba7ea2dbf6e2262 193 Pfam PF13580 SIS domain 15 146 2.2E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO3243 aa57b0a792ae74df1ba7ea2dbf6e2262 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.252 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 YPO1155 e56da8bad9c8ceb97213fb4c79c37654 236 PANTHER PTHR24220:SF404 3 227 2.7E-126 T 22-04-2016 YPO1155 e56da8bad9c8ceb97213fb4c79c37654 236 PANTHER PTHR24220 3 227 2.7E-126 T 22-04-2016 YPO1155 e56da8bad9c8ceb97213fb4c79c37654 236 Gene3D G3DSA:3.40.50.300 1 226 7.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1155 e56da8bad9c8ceb97213fb4c79c37654 236 Pfam PF00005 ABC transporter 19 164 1.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1155 e56da8bad9c8ceb97213fb4c79c37654 236 SUPERFAMILY SSF52540 2 227 5.33E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1155 e56da8bad9c8ceb97213fb4c79c37654 236 SMART SM00382 26 218 4.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2896 016289aea7b84733f52b32c0e428a3c0 409 Pfam PF00266 Aminotransferase class-V 10 373 3.9E-88 T 22-04-2016 IPR000192 Aminotransferase class V domain YPO2896 016289aea7b84733f52b32c0e428a3c0 409 PIRSF PIRSF005572 7 389 5.1E-137 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YPO2896 016289aea7b84733f52b32c0e428a3c0 409 SUPERFAMILY SSF53383 8 395 1.32E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO2896 016289aea7b84733f52b32c0e428a3c0 409 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 409 4.3E-230 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 YPO2896 016289aea7b84733f52b32c0e428a3c0 409 PANTHER PTHR11601:SF45 7 409 4.6E-244 T 22-04-2016 YPO2896 016289aea7b84733f52b32c0e428a3c0 409 Gene3D G3DSA:3.90.1150.10 260 380 6.1E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO2896 016289aea7b84733f52b32c0e428a3c0 409 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 400 54.501 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 YPO2896 016289aea7b84733f52b32c0e428a3c0 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPO2896 016289aea7b84733f52b32c0e428a3c0 409 Gene3D G3DSA:3.40.640.10 22 259 6.4E-96 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO2896 016289aea7b84733f52b32c0e428a3c0 409 PANTHER PTHR11601 7 409 4.6E-244 T 22-04-2016 YPO0215 f8dac1c557d023b0b5dfdfbd193dce1b 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.5E-50 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 YPO0215 f8dac1c557d023b0b5dfdfbd193dce1b 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 7.1E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YPO0215 f8dac1c557d023b0b5dfdfbd193dce1b 110 PANTHER PTHR13501 1 109 4.7E-53 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 YPO0215 f8dac1c557d023b0b5dfdfbd193dce1b 110 Gene3D G3DSA:3.90.470.10 1 109 6.5E-43 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YPO0215 f8dac1c557d023b0b5dfdfbd193dce1b 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.807 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 YPO0215 f8dac1c557d023b0b5dfdfbd193dce1b 110 SUPERFAMILY SSF54843 1 109 1.57E-42 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YPO0215 f8dac1c557d023b0b5dfdfbd193dce1b 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1248 8a07dea23a2542567c39b7448c57f846 198 PIRSF PIRSF012337 1 196 1.0E-62 T 22-04-2016 IPR014462 Phage-associated protein Gp45 YPO1248 8a07dea23a2542567c39b7448c57f846 198 Pfam PF06890 Bacteriophage Mu Gp45 protein 21 176 1.7E-44 T 22-04-2016 IPR014462 Phage-associated protein Gp45 YPO4104 de2aeed91b22fd33b7762cc31acd5262 399 PANTHER PTHR37480 2 399 1.4E-261 T 22-04-2016 YPO4104 de2aeed91b22fd33b7762cc31acd5262 399 Pfam PF07055 Enoyl reductase FAD binding domain 324 387 1.9E-28 T 22-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPO4104 de2aeed91b22fd33b7762cc31acd5262 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 7.9E-107 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPO4104 de2aeed91b22fd33b7762cc31acd5262 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 393 54.597 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPO4104 de2aeed91b22fd33b7762cc31acd5262 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 3.8E-38 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPO3839 d0f955fffde572a951f12bc67d6a3183 405 Hamap MF_00677 UPF0261 protein . 2 402 53.653 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 YPO3839 d0f955fffde572a951f12bc67d6a3183 405 PANTHER PTHR31862 1 405 1.1E-231 T 22-04-2016 YPO3839 d0f955fffde572a951f12bc67d6a3183 405 PIRSF PIRSF033271 1 403 4.6E-204 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 YPO3839 d0f955fffde572a951f12bc67d6a3183 405 Pfam PF06792 Uncharacterised protein family (UPF0261) 4 399 1.5E-159 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 YPO2890 3f1acae0c03d6c2c75336c06528ff002 66 PANTHER PTHR37532 1 66 2.5E-36 T 22-04-2016 YPO2890 3f1acae0c03d6c2c75336c06528ff002 66 Gene3D G3DSA:1.10.10.600 1 66 8.3E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPO2890 3f1acae0c03d6c2c75336c06528ff002 66 PANTHER PTHR37532:SF1 1 66 2.5E-36 T 22-04-2016 YPO2890 3f1acae0c03d6c2c75336c06528ff002 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 2.9E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPO2890 3f1acae0c03d6c2c75336c06528ff002 66 SUPERFAMILY SSF140319 3 64 4.84E-27 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPO2890 3f1acae0c03d6c2c75336c06528ff002 66 PIRSF PIRSF039003 3 66 9.8E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPO2890 3f1acae0c03d6c2c75336c06528ff002 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.0E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YPO0275 bc1917175c3cce57f570bba1878ddd88 89 Pfam PF01206 Sulfurtransferase TusA 21 89 2.2E-19 T 22-04-2016 IPR001455 TusA-like domain YPO0275 bc1917175c3cce57f570bba1878ddd88 89 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 22 46 - T 22-04-2016 IPR001455 TusA-like domain YPO0275 bc1917175c3cce57f570bba1878ddd88 89 Gene3D G3DSA:3.30.110.40 18 89 2.1E-32 T 22-04-2016 IPR001455 TusA-like domain YPO0275 bc1917175c3cce57f570bba1878ddd88 89 PANTHER PTHR33279 1 89 1.5E-30 T 22-04-2016 YPO0275 bc1917175c3cce57f570bba1878ddd88 89 SUPERFAMILY SSF64307 10 89 2.09E-24 T 22-04-2016 IPR001455 TusA-like domain YPO1628 9d9929e228e8457d7b7e7397f0fc574b 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 415 5.6E-159 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 YPO1628 9d9929e228e8457d7b7e7397f0fc574b 416 PANTHER PTHR30489:SF0 4 416 2.5E-90 T 22-04-2016 YPO1628 9d9929e228e8457d7b7e7397f0fc574b 416 Pfam PF12704 MacB-like periplasmic core domain 29 240 1.7E-15 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPO1628 9d9929e228e8457d7b7e7397f0fc574b 416 PANTHER PTHR30489 4 416 2.5E-90 T 22-04-2016 YPO1628 9d9929e228e8457d7b7e7397f0fc574b 416 Pfam PF02687 FtsX-like permease family 276 409 3.7E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPO1628 9d9929e228e8457d7b7e7397f0fc574b 416 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 7 416 1.6E-212 T 22-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 PANTHER PTHR11964 1 376 1.3E-288 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 Gene3D G3DSA:3.30.300.10 11 135 8.8E-51 T 22-04-2016 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.2E-45 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.731 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 3.7E-69 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 SUPERFAMILY SSF55973 111 232 3.49E-52 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 SUPERFAMILY SSF55973 233 382 7.46E-71 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 SUPERFAMILY SSF55973 3 109 1.06E-47 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 PIRSF PIRSF000497 1 381 2.8E-175 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 Gene3D G3DSA:3.30.300.10 244 381 7.8E-71 T 22-04-2016 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 Gene3D G3DSA:3.30.300.10 136 233 3.3E-44 T 22-04-2016 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.7E-199 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO0931 6093ff1ad56a9cf5b044827069cdcb18 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.3E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 SMART SM00437 281 559 1.3E-103 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 Pfam PF01751 Toprim domain 4 136 1.8E-18 T 22-04-2016 IPR006171 Toprim domain YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 403 419 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 522 536 3.8E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 SUPERFAMILY SSF56712 2 609 1.96E-188 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 SMART SM00436 129 224 6.8E-36 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 Pfam PF01131 DNA topoisomerase 159 594 1.2E-111 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 631 5.7E-279 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 PANTHER PTHR11390 522 610 1.3E-199 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 PANTHER PTHR11390 1 504 1.3E-199 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 333 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 Gene3D G3DSA:3.40.50.140 2 154 7.9E-49 T 22-04-2016 IPR006171 Toprim domain YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 SMART SM00493 2 125 5.6E-32 T 22-04-2016 IPR006171 Toprim domain YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 Gene3D G3DSA:2.70.20.10 219 253 1.2E-47 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 Gene3D G3DSA:2.70.20.10 370 489 1.2E-47 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 642 66.05 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 PANTHER PTHR11390:SF21 522 610 1.3E-199 T 22-04-2016 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 PANTHER PTHR11390:SF21 1 504 1.3E-199 T 22-04-2016 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 Gene3D G3DSA:1.10.460.10 491 608 5.8E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPO2165 ad5b6a782aa7d7ad793025b432791ae6 642 Gene3D G3DSA:1.10.460.10 159 218 5.8E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPO1031 95ded84fba72e736f936e074e1bb7057 368 PANTHER PTHR37524 1 361 2.2E-236 T 22-04-2016 YPO1031 95ded84fba72e736f936e074e1bb7057 368 PANTHER PTHR37524:SF2 1 361 2.2E-236 T 22-04-2016 YPO1031 95ded84fba72e736f936e074e1bb7057 368 PIRSF PIRSF028774 2 361 6.0E-194 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 YPO1031 95ded84fba72e736f936e074e1bb7057 368 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 2 356 85.448 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 YPO1031 95ded84fba72e736f936e074e1bb7057 368 SUPERFAMILY SSF53335 185 289 1.77E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1031 95ded84fba72e736f936e074e1bb7057 368 Gene3D G3DSA:3.40.50.150 185 315 1.4E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1031 95ded84fba72e736f936e074e1bb7057 368 Pfam PF01728 FtsJ-like methyltransferase 187 281 3.5E-7 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 YPO0574 f2d4e963a1247a4369516008bab923fd 232 Pfam PF09335 SNARE associated Golgi protein 48 172 9.1E-20 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPO0574 f2d4e963a1247a4369516008bab923fd 232 PANTHER PTHR30353:SF11 1 232 4.6E-193 T 22-04-2016 YPO0574 f2d4e963a1247a4369516008bab923fd 232 PANTHER PTHR30353 1 232 4.6E-193 T 22-04-2016 IPR032818 DedA family YPO3653 39ae6354467292df798027963d99539f 39 SUPERFAMILY SSF101125 1 34 2.75E-13 T 22-04-2016 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 YPO3653 39ae6354467292df798027963d99539f 39 Pfam PF09204 Bacterial self-protective colicin-like immunity 1 32 9.7E-9 T 22-04-2016 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 YPO0504 5727413f39c42f5b20ae356ed4a53c49 614 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 609 1.7E-109 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO0504 5727413f39c42f5b20ae356ed4a53c49 614 PANTHER PTHR35370:SF3 3 612 0.0 T 22-04-2016 YPO0504 5727413f39c42f5b20ae356ed4a53c49 614 PANTHER PTHR35370 3 612 0.0 T 22-04-2016 YPO0504 5727413f39c42f5b20ae356ed4a53c49 614 PIRSF PIRSF028304 2 614 1.3E-179 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO0504 5727413f39c42f5b20ae356ed4a53c49 614 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 8 610 8.8E-138 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO3512 f8b2654b453bfc8156e546f6a043ecf7 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.14 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3512 f8b2654b453bfc8156e546f6a043ecf7 103 SUPERFAMILY SSF141091 1 102 3.4E-38 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 YPO3512 f8b2654b453bfc8156e546f6a043ecf7 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.0E-44 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3512 f8b2654b453bfc8156e546f6a043ecf7 103 PANTHER PTHR21349 1 101 5.8E-49 T 22-04-2016 YPO3512 f8b2654b453bfc8156e546f6a043ecf7 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.7E-39 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 YPO3512 f8b2654b453bfc8156e546f6a043ecf7 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 169 209 2.2E-6 T 22-04-2016 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 3.0E-30 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 PANTHER PTHR32432 1 413 6.8E-185 T 22-04-2016 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.689 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 198 384 2.13E-47 T 22-04-2016 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 PIRSF PIRSF003101 1 418 9.6E-154 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 PANTHER PTHR32432:SF4 1 413 6.8E-185 T 22-04-2016 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 SMART SM00842 10 196 1.3E-96 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 7 138 2.5E-33 T 22-04-2016 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 8 221 7.12E-62 T 22-04-2016 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 298 359 1.2E-29 T 22-04-2016 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 210 234 1.2E-29 T 22-04-2016 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF14450 Cell division protein FtsA 207 381 1.3E-24 T 22-04-2016 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-161 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 YPO0559 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.90.640.10 235 297 5.1E-18 T 22-04-2016 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 PANTHER PTHR30005 4 514 2.7E-272 T 22-04-2016 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 Gene3D G3DSA:3.30.420.150 133 312 2.0E-52 T 22-04-2016 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 SUPERFAMILY SSF53067 138 311 1.13E-47 T 22-04-2016 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 SUPERFAMILY SSF53067 14 134 4.98E-37 T 22-04-2016 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 PIRSF PIRSF001267 4 507 1.7E-203 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 PANTHER PTHR30005:SF4 4 514 2.7E-272 T 22-04-2016 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 Pfam PF02541 Ppx/GppA phosphatase family 27 309 1.6E-98 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 307 3.2E-101 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 Gene3D G3DSA:3.30.420.40 6 132 2.8E-44 T 22-04-2016 YPO2837 9debccb20f1d1c51c19e4e6aa2b05559 519 SUPERFAMILY SSF109604 314 507 8.63E-55 T 22-04-2016 YPO4082 81d9045b1035f8e247200021b3ae5b97 421 PANTHER PTHR11751:SF419 11 415 6.2E-189 T 22-04-2016 YPO4082 81d9045b1035f8e247200021b3ae5b97 421 Gene3D G3DSA:3.90.1150.10 268 410 3.1E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO4082 81d9045b1035f8e247200021b3ae5b97 421 SUPERFAMILY SSF53383 62 410 3.99E-60 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO4082 81d9045b1035f8e247200021b3ae5b97 421 Pfam PF00155 Aminotransferase class I and II 68 391 3.7E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO4082 81d9045b1035f8e247200021b3ae5b97 421 PANTHER PTHR11751 11 415 6.2E-189 T 22-04-2016 YPO4082 81d9045b1035f8e247200021b3ae5b97 421 Gene3D G3DSA:3.40.640.10 61 267 5.1E-39 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0020 f8a5ce43d61b02896d15f83becd20f93 188 Pfam PF04220 Der GTPase activator (YihI) 20 179 7.1E-57 T 22-04-2016 IPR007336 Der GTPase activator YPO0020 f8a5ce43d61b02896d15f83becd20f93 188 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 182 17.649 T 22-04-2016 IPR007336 Der GTPase activator YPO2321 e799a54faabd3027b1b3070d674745f0 104 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 8 96 1.6E-23 T 22-04-2016 IPR009241 Toxin HigB-like YPO1187 10be45516879d1bf08bd839e4703c8d5 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 6.5E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO1187 10be45516879d1bf08bd839e4703c8d5 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 6.5E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO1187 10be45516879d1bf08bd839e4703c8d5 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 94 104 6.5E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO1187 10be45516879d1bf08bd839e4703c8d5 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 6.5E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YPO1187 10be45516879d1bf08bd839e4703c8d5 422 SUPERFAMILY SSF53822 30 408 1.3E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO1187 10be45516879d1bf08bd839e4703c8d5 422 Pfam PF13433 Periplasmic binding protein domain 31 406 1.1E-170 T 22-04-2016 YPO1187 10be45516879d1bf08bd839e4703c8d5 422 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 2.7E-177 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA YPO1187 10be45516879d1bf08bd839e4703c8d5 422 PANTHER PTHR30483 1 420 7.9E-233 T 22-04-2016 YPO1187 10be45516879d1bf08bd839e4703c8d5 422 PANTHER PTHR30483:SF8 1 420 7.9E-233 T 22-04-2016 YPO1187 10be45516879d1bf08bd839e4703c8d5 422 Gene3D G3DSA:3.40.50.2300 146 345 4.3E-72 T 22-04-2016 YPO3954 2e16d7903419677346647f1f1cb07091 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 8.4E-197 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPO3954 2e16d7903419677346647f1f1cb07091 438 Pfam PF02447 GntP family permease 1 437 7.6E-183 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPO3954 2e16d7903419677346647f1f1cb07091 438 PANTHER PTHR30354:SF4 1 438 0.0 T 22-04-2016 YPO3954 2e16d7903419677346647f1f1cb07091 438 PANTHER PTHR30354 1 438 0.0 T 22-04-2016 YPO3954 2e16d7903419677346647f1f1cb07091 438 PIRSF PIRSF002746 1 438 1.2E-159 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPO0647 51df37adbe29dac42b76cedd65403cda 216 SMART SM01207 10 185 2.0E-85 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPO0647 51df37adbe29dac42b76cedd65403cda 216 PANTHER PTHR30309 1 216 2.3E-113 T 22-04-2016 YPO0647 51df37adbe29dac42b76cedd65403cda 216 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.2E-51 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPO0647 51df37adbe29dac42b76cedd65403cda 216 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.771 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPO0647 51df37adbe29dac42b76cedd65403cda 216 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 7.1E-81 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPO0647 51df37adbe29dac42b76cedd65403cda 216 PANTHER PTHR30309:SF0 1 216 2.3E-113 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YPO4126 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site YPO4126 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.6E-9 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 YPO4126 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YPO4126 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YPO4126 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YPO4126 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 2 77 5.0E-31 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YPO4126 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.331 T 22-04-2016 YPO4126 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 YPO4126 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YPO4126 56b533cc370c1e28d908debdcf79489b 79 PANTHER PTHR10031 1 78 6.8E-25 T 22-04-2016 YPO0012 8e577314f6a4b544650cf0030977bed2 176 PANTHER PTHR19136 3 143 1.1E-41 T 22-04-2016 YPO0012 8e577314f6a4b544650cf0030977bed2 176 SUPERFAMILY SSF52540 6 168 1.17E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0012 8e577314f6a4b544650cf0030977bed2 176 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 3.1E-43 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YPO0012 8e577314f6a4b544650cf0030977bed2 176 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 2.9E-47 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YPO0012 8e577314f6a4b544650cf0030977bed2 176 PANTHER PTHR19136:SF82 3 143 1.1E-41 T 22-04-2016 YPO0012 8e577314f6a4b544650cf0030977bed2 176 Gene3D G3DSA:3.40.50.300 6 169 2.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3477 c5baf972695e1346e599d62f15eb46e6 173 PANTHER PTHR10094:SF16 1 144 1.2E-74 T 22-04-2016 YPO3477 c5baf972695e1346e599d62f15eb46e6 173 Pfam PF02036 SCP-2 sterol transfer family 46 133 1.8E-19 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPO3477 c5baf972695e1346e599d62f15eb46e6 173 PIRSF PIRSF025550 1 173 9.2E-83 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT YPO3477 c5baf972695e1346e599d62f15eb46e6 173 Gene3D G3DSA:3.30.1050.10 58 135 3.7E-13 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPO3477 c5baf972695e1346e599d62f15eb46e6 173 PANTHER PTHR10094 1 144 1.2E-74 T 22-04-2016 YPO3477 c5baf972695e1346e599d62f15eb46e6 173 SUPERFAMILY SSF55718 42 137 1.79E-23 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPO0155 ef69a3553b4753b779e7a7a6afa8ff8c 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPO0155 ef69a3553b4753b779e7a7a6afa8ff8c 225 PANTHER PTHR11749 2 222 8.9E-145 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPO0155 ef69a3553b4753b779e7a7a6afa8ff8c 225 PANTHER PTHR11749:SF7 2 222 8.9E-145 T 22-04-2016 YPO0155 ef69a3553b4753b779e7a7a6afa8ff8c 225 Gene3D G3DSA:3.20.20.70 1 222 1.8E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0155 ef69a3553b4753b779e7a7a6afa8ff8c 225 SUPERFAMILY SSF51366 3 218 1.57E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPO0155 ef69a3553b4753b779e7a7a6afa8ff8c 225 PIRSF PIRSF001461 1 225 2.0E-107 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPO0155 ef69a3553b4753b779e7a7a6afa8ff8c 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPO0155 ef69a3553b4753b779e7a7a6afa8ff8c 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.3E-93 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPO0155 ef69a3553b4753b779e7a7a6afa8ff8c 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 5.9E-99 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YPO0270 2f0a1058cdeead245b051c15209b876c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0270 2f0a1058cdeead245b051c15209b876c 216 PANTHER PTHR30587:SF3 1 216 3.4E-163 T 22-04-2016 YPO0270 2f0a1058cdeead245b051c15209b876c 216 Pfam PF00813 FliP family 13 211 2.8E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0270 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0270 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0270 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0270 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0270 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0270 2f0a1058cdeead245b051c15209b876c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 6.0E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO0270 2f0a1058cdeead245b051c15209b876c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 2.6E-84 T 22-04-2016 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 YPO0270 2f0a1058cdeead245b051c15209b876c 216 PANTHER PTHR30587 1 216 3.4E-163 T 22-04-2016 YPO0270 2f0a1058cdeead245b051c15209b876c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YPO3852 e76c4370525707090cc4422892add58a 406 SUPERFAMILY SSF48452 269 388 5.51E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3852 e76c4370525707090cc4422892add58a 406 SUPERFAMILY SSF48452 157 219 5.51E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3852 e76c4370525707090cc4422892add58a 406 Gene3D G3DSA:1.25.40.10 82 203 6.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3852 e76c4370525707090cc4422892add58a 406 Gene3D G3DSA:1.25.40.10 265 390 6.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3852 e76c4370525707090cc4422892add58a 406 PANTHER PTHR23083:SF396 83 382 1.5E-27 T 22-04-2016 YPO3852 e76c4370525707090cc4422892add58a 406 PANTHER PTHR23083 83 382 1.5E-27 T 22-04-2016 YPO3852 e76c4370525707090cc4422892add58a 406 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 5.1E-133 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 YPO3852 e76c4370525707090cc4422892add58a 406 Pfam PF07219 HemY protein N-terminus 26 132 2.3E-32 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 YPO3120 7c8908940156382c6f6bf42dbb322abd 201 Pfam PF02132 RecR protein 41 77 2.1E-14 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger YPO3120 7c8908940156382c6f6bf42dbb322abd 201 SUPERFAMILY SSF111304 2 199 4.58E-70 T 22-04-2016 IPR023627 Recombination protein RecR YPO3120 7c8908940156382c6f6bf42dbb322abd 201 PANTHER PTHR30446 1 201 3.5E-119 T 22-04-2016 YPO3120 7c8908940156382c6f6bf42dbb322abd 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 YPO3120 7c8908940156382c6f6bf42dbb322abd 201 Pfam PF13662 Toprim domain 82 172 6.1E-21 T 22-04-2016 IPR006171 Toprim domain YPO3120 7c8908940156382c6f6bf42dbb322abd 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.192 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YPO3120 7c8908940156382c6f6bf42dbb322abd 201 PANTHER PTHR30446:SF0 1 201 3.5E-119 T 22-04-2016 YPO3120 7c8908940156382c6f6bf42dbb322abd 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 2.0E-79 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YPO3120 7c8908940156382c6f6bf42dbb322abd 201 SMART SM00493 81 166 1.1E-17 T 22-04-2016 IPR006171 Toprim domain YPO1706 59c96ed54f68a2d0c5f2b64266702dc0 293 PANTHER PTHR10120:SF19 1 288 1.3E-114 T 22-04-2016 YPO1706 59c96ed54f68a2d0c5f2b64266702dc0 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 25.994 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 YPO1706 59c96ed54f68a2d0c5f2b64266702dc0 293 Pfam PF01435 Peptidase family M48 74 288 5.5E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YPO1706 59c96ed54f68a2d0c5f2b64266702dc0 293 PANTHER PTHR10120 1 288 1.3E-114 T 22-04-2016 YPO1706 59c96ed54f68a2d0c5f2b64266702dc0 293 Gene3D G3DSA:3.30.2010.10 69 156 4.4E-32 T 22-04-2016 YPO3501 d6cc1da71c61caf14d8e664007af4c1d 277 PANTHER PTHR20941 13 277 8.2E-130 T 22-04-2016 YPO3501 d6cc1da71c61caf14d8e664007af4c1d 277 Gene3D G3DSA:3.20.20.20 12 274 2.0E-110 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPO3501 d6cc1da71c61caf14d8e664007af4c1d 277 PANTHER PTHR20941:SF1 13 277 8.2E-130 T 22-04-2016 YPO3501 d6cc1da71c61caf14d8e664007af4c1d 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 3.0E-102 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 YPO3501 d6cc1da71c61caf14d8e664007af4c1d 277 SUPERFAMILY SSF51717 5 274 6.54E-106 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 YPO3501 d6cc1da71c61caf14d8e664007af4c1d 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPO3501 d6cc1da71c61caf14d8e664007af4c1d 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPO3501 d6cc1da71c61caf14d8e664007af4c1d 277 Pfam PF00809 Pterin binding enzyme 18 257 3.4E-89 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YPO3470 0d1ca9dc8a68369b91241bc8c8672b70 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 272 9.4E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3470 0d1ca9dc8a68369b91241bc8c8672b70 279 PANTHER PTHR32243 1 279 9.2E-155 T 22-04-2016 YPO3470 0d1ca9dc8a68369b91241bc8c8672b70 279 SUPERFAMILY SSF161098 3 279 3.74E-66 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3470 0d1ca9dc8a68369b91241bc8c8672b70 279 PANTHER PTHR32243:SF38 1 279 9.2E-155 T 22-04-2016 YPO3470 0d1ca9dc8a68369b91241bc8c8672b70 279 Gene3D G3DSA:1.10.3720.10 3 266 1.6E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 Pfam PF07729 FCD domain 99 226 9.0E-19 T 22-04-2016 IPR011711 GntR, C-terminal YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 Gene3D G3DSA:1.10.10.10 7 76 5.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 PANTHER PTHR11751 93 115 4.9E-50 T 22-04-2016 YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 PANTHER PTHR11751 1 77 4.9E-50 T 22-04-2016 YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 SMART SM00895 99 227 3.3E-19 T 22-04-2016 IPR011711 GntR, C-terminal YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.6E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 SUPERFAMILY SSF48008 95 235 1.12E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 SMART SM00345 15 74 1.6E-26 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 PANTHER PTHR11751:SF355 93 115 4.9E-50 T 22-04-2016 YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 PANTHER PTHR11751:SF355 1 77 4.9E-50 T 22-04-2016 YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 Gene3D G3DSA:1.20.120.530 95 238 4.3E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO3420 a378cd4fd4c31ae6aa42a767bb20f654 254 SUPERFAMILY SSF46785 5 76 2.45E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1849 715743a0878e99604083ec815687b3ec 112 SUPERFAMILY SSF46785 38 91 6.56E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1849 715743a0878e99604083ec815687b3ec 112 Gene3D G3DSA:1.10.10.10 46 102 9.2E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0334 065c335552de16ac31456b58aeb0aa05 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 8 342 1.2E-97 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 YPO0334 065c335552de16ac31456b58aeb0aa05 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 344 2.7E-227 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 YPO0334 065c335552de16ac31456b58aeb0aa05 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 42.992 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 YPO3580 b9c86a4a92e9ad0cf76b8e2063aa070c 181 PANTHER PTHR36504 1 181 2.5E-55 T 22-04-2016 YPO3580 b9c86a4a92e9ad0cf76b8e2063aa070c 181 Pfam PF03968 OstA-like protein 35 146 3.6E-28 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal YPO3580 b9c86a4a92e9ad0cf76b8e2063aa070c 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 165 25.31 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 YPO3580 b9c86a4a92e9ad0cf76b8e2063aa070c 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 164 7.6E-48 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 YPO3580 b9c86a4a92e9ad0cf76b8e2063aa070c 181 Gene3D G3DSA:2.60.450.10 26 161 7.9E-39 T 22-04-2016 YPO2367 aea91bdb5c03821cb2bedd580915625e 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.4E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YPO2367 aea91bdb5c03821cb2bedd580915625e 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 189 8.7E-15 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YPO2367 aea91bdb5c03821cb2bedd580915625e 201 PANTHER PTHR11260:SF154 1 200 1.2E-132 T 22-04-2016 YPO2367 aea91bdb5c03821cb2bedd580915625e 201 SUPERFAMILY SSF47616 84 199 3.06E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO2367 aea91bdb5c03821cb2bedd580915625e 201 Gene3D G3DSA:1.20.1050.10 90 188 1.4E-38 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YPO2367 aea91bdb5c03821cb2bedd580915625e 201 PANTHER PTHR11260 1 200 1.2E-132 T 22-04-2016 YPO2367 aea91bdb5c03821cb2bedd580915625e 201 Gene3D G3DSA:3.40.30.10 1 89 1.4E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2367 aea91bdb5c03821cb2bedd580915625e 201 SUPERFAMILY SSF52833 1 79 4.12E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0698 542cb237ee2d9951dd3ec522b2171300 826 Pfam PF13954 PapC N-terminal domain 27 170 1.2E-39 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPO0698 542cb237ee2d9951dd3ec522b2171300 826 PANTHER PTHR30451 1 826 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO0698 542cb237ee2d9951dd3ec522b2171300 826 PANTHER PTHR30451:SF10 1 826 0.0 T 22-04-2016 YPO0698 542cb237ee2d9951dd3ec522b2171300 826 Pfam PF00577 Outer membrane usher protein 187 740 2.6E-167 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO0698 542cb237ee2d9951dd3ec522b2171300 826 Pfam PF13953 PapC C-terminal domain 749 807 2.1E-12 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPO0698 542cb237ee2d9951dd3ec522b2171300 826 SUPERFAMILY SSF141729 25 145 1.83E-30 T 22-04-2016 YPO2664 5995a3dc90617603d7a6d0f63cafbb6e 221 PANTHER PTHR24220 3 194 1.4E-94 T 22-04-2016 YPO2664 5995a3dc90617603d7a6d0f63cafbb6e 221 SMART SM00382 26 199 1.7E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2664 5995a3dc90617603d7a6d0f63cafbb6e 221 Gene3D G3DSA:3.40.50.300 1 194 8.9E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2664 5995a3dc90617603d7a6d0f63cafbb6e 221 PANTHER PTHR24220:SF486 3 194 1.4E-94 T 22-04-2016 YPO2664 5995a3dc90617603d7a6d0f63cafbb6e 221 Pfam PF00005 ABC transporter 19 150 3.3E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2664 5995a3dc90617603d7a6d0f63cafbb6e 221 SUPERFAMILY SSF52540 2 194 6.09E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2664 5995a3dc90617603d7a6d0f63cafbb6e 221 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0493 73652e4ee2d470dcd0b18552ca07978f 331 PANTHER PTHR30004:SF5 2 331 1.8E-233 T 22-04-2016 YPO0493 73652e4ee2d470dcd0b18552ca07978f 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 326 35.71 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 YPO0493 73652e4ee2d470dcd0b18552ca07978f 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 2.4E-107 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 YPO0493 73652e4ee2d470dcd0b18552ca07978f 331 Gene3D G3DSA:3.40.718.10 2 329 5.9E-135 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO0493 73652e4ee2d470dcd0b18552ca07978f 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 325 5.3E-129 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 YPO0493 73652e4ee2d470dcd0b18552ca07978f 331 PANTHER PTHR30004 2 331 1.8E-233 T 22-04-2016 YPO0493 73652e4ee2d470dcd0b18552ca07978f 331 SUPERFAMILY SSF53659 7 328 1.57E-112 T 22-04-2016 YPO1715 64172c7ed4d990d77e423d3508cdceb8 283 Gene3D G3DSA:3.40.80.10 32 201 2.2E-56 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO1715 64172c7ed4d990d77e423d3508cdceb8 283 PANTHER PTHR30417 1 283 2.4E-92 T 22-04-2016 YPO1715 64172c7ed4d990d77e423d3508cdceb8 283 Pfam PF01471 Putative peptidoglycan binding domain 218 269 1.8E-9 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPO1715 64172c7ed4d990d77e423d3508cdceb8 283 Gene3D G3DSA:1.10.101.10 217 254 6.9E-6 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPO1715 64172c7ed4d990d77e423d3508cdceb8 283 SUPERFAMILY SSF47090 202 279 2.75E-22 T 22-04-2016 IPR002477 Peptidoglycan binding-like YPO1715 64172c7ed4d990d77e423d3508cdceb8 283 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 45 183 5.3E-20 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO1715 64172c7ed4d990d77e423d3508cdceb8 283 SMART SM00644 36 182 6.2E-25 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO1715 64172c7ed4d990d77e423d3508cdceb8 283 SUPERFAMILY SSF55846 28 198 6.28E-52 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO2040 3064cf68c32a45a94dde160a991419fd 401 SUPERFAMILY SSF103473 14 392 7.19E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2040 3064cf68c32a45a94dde160a991419fd 401 PANTHER PTHR23517:SF2 1 401 3.4E-201 T 22-04-2016 YPO2040 3064cf68c32a45a94dde160a991419fd 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 40.633 T 22-04-2016 IPR022855 Multidrug resistance protein MdtH YPO2040 3064cf68c32a45a94dde160a991419fd 401 Pfam PF07690 Major Facilitator Superfamily 20 234 3.2E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO2040 3064cf68c32a45a94dde160a991419fd 401 Gene3D G3DSA:1.20.1250.20 19 187 4.9E-26 T 22-04-2016 YPO2040 3064cf68c32a45a94dde160a991419fd 401 Gene3D G3DSA:1.20.1250.20 199 387 1.4E-17 T 22-04-2016 YPO2040 3064cf68c32a45a94dde160a991419fd 401 PANTHER PTHR23517 1 401 3.4E-201 T 22-04-2016 YPO0471 f1947a172849d381143cc24849813d53 299 SUPERFAMILY SSF46785 1 87 2.72E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0471 f1947a172849d381143cc24849813d53 299 PANTHER PTHR30293 4 299 2.4E-226 T 22-04-2016 YPO0471 f1947a172849d381143cc24849813d53 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0471 f1947a172849d381143cc24849813d53 299 Gene3D G3DSA:3.40.190.10 99 228 1.6E-9 T 22-04-2016 YPO0471 f1947a172849d381143cc24849813d53 299 Gene3D G3DSA:1.10.10.10 5 85 1.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0471 f1947a172849d381143cc24849813d53 299 PANTHER PTHR30293:SF2 4 299 2.4E-226 T 22-04-2016 YPO0471 f1947a172849d381143cc24849813d53 299 Pfam PF03466 LysR substrate binding domain 98 288 5.2E-12 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0471 f1947a172849d381143cc24849813d53 299 SUPERFAMILY SSF53850 92 290 2.95E-26 T 22-04-2016 YPO3439 b77e344472656a6feb9b421dcf1452d6 358 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 356 5.0E-139 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 YPO3439 b77e344472656a6feb9b421dcf1452d6 358 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 356 2.7E-74 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 YPO3439 b77e344472656a6feb9b421dcf1452d6 358 PANTHER PTHR33529:SF1 1 358 3.4E-178 T 22-04-2016 YPO3439 b77e344472656a6feb9b421dcf1452d6 358 PANTHER PTHR33529 1 358 3.4E-178 T 22-04-2016 YPO2500 c92be8660117b20c2be229f2a6b93bea 496 PANTHER PTHR24220 6 378 6.0E-150 T 22-04-2016 YPO2500 c92be8660117b20c2be229f2a6b93bea 496 PANTHER PTHR24220:SF416 6 378 6.0E-150 T 22-04-2016 YPO2500 c92be8660117b20c2be229f2a6b93bea 496 Pfam PF00005 ABC transporter 274 423 1.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2500 c92be8660117b20c2be229f2a6b93bea 496 Pfam PF00005 ABC transporter 20 170 1.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2500 c92be8660117b20c2be229f2a6b93bea 496 Gene3D G3DSA:3.40.50.300 259 487 3.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2500 c92be8660117b20c2be229f2a6b93bea 496 Gene3D G3DSA:3.40.50.300 2 229 2.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2500 c92be8660117b20c2be229f2a6b93bea 496 SMART SM00382 29 217 1.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2500 c92be8660117b20c2be229f2a6b93bea 496 SMART SM00382 279 480 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2500 c92be8660117b20c2be229f2a6b93bea 496 SUPERFAMILY SSF52540 3 227 9.76E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2500 c92be8660117b20c2be229f2a6b93bea 496 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2500 c92be8660117b20c2be229f2a6b93bea 496 SUPERFAMILY SSF52540 272 485 1.57E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1441 e473a9e575f6fb3d87bfb9bc6308449d 154 Pfam PF02142 MGS-like domain 27 118 2.0E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO1441 e473a9e575f6fb3d87bfb9bc6308449d 154 SMART SM00851 25 118 1.3E-26 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO1441 e473a9e575f6fb3d87bfb9bc6308449d 154 PIRSF PIRSF006614 8 151 1.2E-64 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YPO1441 e473a9e575f6fb3d87bfb9bc6308449d 154 PANTHER PTHR30492 2 154 4.5E-91 T 22-04-2016 YPO1441 e473a9e575f6fb3d87bfb9bc6308449d 154 Gene3D G3DSA:3.40.50.1380 2 151 2.6E-64 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO1441 e473a9e575f6fb3d87bfb9bc6308449d 154 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 72 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YPO1441 e473a9e575f6fb3d87bfb9bc6308449d 154 SUPERFAMILY SSF52335 6 150 7.59E-57 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YPO1441 e473a9e575f6fb3d87bfb9bc6308449d 154 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.0E-64 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YPO1441 e473a9e575f6fb3d87bfb9bc6308449d 154 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 38.608 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 SUPERFAMILY SSF55136 127 272 3.14E-18 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 SUPERFAMILY SSF46689 8 57 6.66E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 SMART SM00342 23 106 1.4E-29 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 Gene3D G3DSA:1.10.10.60 61 122 3.9E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 PANTHER PTHR11019:SF118 1 114 4.2E-75 T 22-04-2016 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 Pfam PF06445 GyrI-like small molecule binding domain 129 281 3.2E-19 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 Pfam PF12833 Helix-turn-helix domain 30 107 9.5E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 SUPERFAMILY SSF46689 61 111 6.72E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 Gene3D G3DSA:3.20.80.10 125 296 1.1E-24 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 5.2E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 5.2E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 Gene3D G3DSA:1.10.10.60 9 58 7.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO2243 278eba049e09b3e8d6a3cee3280aa626 297 PANTHER PTHR11019 1 114 4.2E-75 T 22-04-2016 YPO0818 2170d9d6295084b351d8be90c0133060 138 Gene3D G3DSA:1.10.10.10 30 120 7.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0818 2170d9d6295084b351d8be90c0133060 138 SUPERFAMILY SSF46894 43 118 9.35E-6 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 SUPERFAMILY SSF55103 258 542 1.8E-53 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 Gene3D G3DSA:1.10.1060.10 657 705 1.8E-15 T 22-04-2016 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 Gene3D G3DSA:1.10.1060.10 517 620 1.8E-15 T 22-04-2016 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 SUPERFAMILY SSF46548 655 691 1.92E-8 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 SUPERFAMILY SSF46548 516 623 1.92E-8 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.2E-61 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 674 685 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 Pfam PF13183 4Fe-4S dicluster domain 577 688 2.7E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 SUPERFAMILY SSF56176 18 282 3.43E-52 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 PANTHER PTHR11748:SF35 249 588 4.4E-191 T 22-04-2016 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 PANTHER PTHR11748:SF35 17 196 4.4E-191 T 22-04-2016 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 Gene3D G3DSA:3.30.43.10 2 109 1.8E-28 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 Gene3D G3DSA:3.30.465.10 110 282 1.0E-41 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 Pfam PF01565 FAD binding domain 52 192 1.1E-34 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 PANTHER PTHR11748 249 588 4.4E-191 T 22-04-2016 YPO2407 2bdb8e07513917e7adda80d00cf9383b 1018 PANTHER PTHR11748 17 196 4.4E-191 T 22-04-2016 YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 PIRSF PIRSF000148 4 336 5.1E-98 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Gene3D G3DSA:3.30.360.10 145 313 1.2E-54 T 22-04-2016 YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.7E-25 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 PANTHER PTHR10174 48 336 8.2E-58 T 22-04-2016 YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 PANTHER PTHR10174:SF2 48 336 8.2E-58 T 22-04-2016 YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Gene3D G3DSA:3.40.50.720 1 144 1.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 SMART SM00859 6 121 1.8E-34 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 SUPERFAMILY SSF55347 132 318 5.06E-53 T 22-04-2016 YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 5.0E-35 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YPO2765 b2d2a0d6dfebbcf0f55f051a4e7a79df 336 SUPERFAMILY SSF51735 5 157 9.24E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3445 40c72c776434f96a939bc99fc4845be9 143 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.951 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B YPO3445 40c72c776434f96a939bc99fc4845be9 143 PIRSF PIRSF018193 1 143 1.8E-68 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B YPO3445 40c72c776434f96a939bc99fc4845be9 143 SUPERFAMILY SSF89946 3 123 5.62E-42 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain YPO3445 40c72c776434f96a939bc99fc4845be9 143 Pfam PF06877 Regulator of ribonuclease activity B 12 113 6.8E-34 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain YPO3445 40c72c776434f96a939bc99fc4845be9 143 Gene3D G3DSA:3.30.70.970 1 124 1.6E-53 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain YPO0866 7aa9f168cc51ba00fd32c9a46a68f5ee 101 PANTHER PTHR37465 4 101 1.6E-47 T 22-04-2016 YPO0866 7aa9f168cc51ba00fd32c9a46a68f5ee 101 Pfam PF05488 PAAR motif 21 90 1.9E-22 T 22-04-2016 IPR008727 PAAR motif YPO0866 7aa9f168cc51ba00fd32c9a46a68f5ee 101 PANTHER PTHR37465:SF1 4 101 1.6E-47 T 22-04-2016 YPO1560 8a0f2581aa5a809d0ab8708f1d3428b0 105 PANTHER PTHR39591 2 105 2.4E-61 T 22-04-2016 YPO1560 8a0f2581aa5a809d0ab8708f1d3428b0 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 3.0E-43 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YPO1560 8a0f2581aa5a809d0ab8708f1d3428b0 105 Pfam PF04363 Protein of unknown function (DUF496) 9 100 3.7E-47 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YPO1560 8a0f2581aa5a809d0ab8708f1d3428b0 105 PIRSF PIRSF028773 1 105 8.2E-51 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YPO1560 8a0f2581aa5a809d0ab8708f1d3428b0 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 25.92 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YPO2116 37aa0ebd44f182fcb394cbfa89f1181a 306 Pfam PF08813 Phage tail tube protein, TTP 52 217 5.8E-49 T 22-04-2016 IPR014918 Phage tail tube protein 3 YPO2116 37aa0ebd44f182fcb394cbfa89f1181a 306 Pfam PF02368 Bacterial Ig-like domain (group 2) 223 302 1.6E-16 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 YPO2116 37aa0ebd44f182fcb394cbfa89f1181a 306 SMART SM00635 223 301 1.0E-13 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 YPO2116 37aa0ebd44f182fcb394cbfa89f1181a 306 Gene3D G3DSA:2.60.40.1080 222 305 1.2E-18 T 22-04-2016 YPO2116 37aa0ebd44f182fcb394cbfa89f1181a 306 SUPERFAMILY SSF49373 222 304 9.81E-13 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO0588 d4891a9353477c5d85f48760fb099640 395 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 50.267 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0588 d4891a9353477c5d85f48760fb099640 395 Pfam PF05175 Methyltransferase small domain 200 371 7.9E-53 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YPO0588 d4891a9353477c5d85f48760fb099640 395 PANTHER PTHR18895 80 394 5.9E-181 T 22-04-2016 YPO0588 d4891a9353477c5d85f48760fb099640 395 Gene3D G3DSA:3.40.50.150 198 373 1.3E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0588 d4891a9353477c5d85f48760fb099640 395 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO0588 d4891a9353477c5d85f48760fb099640 395 PIRSF PIRSF037565 1 375 1.1E-166 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YPO0588 d4891a9353477c5d85f48760fb099640 395 PANTHER PTHR18895:SF6 80 394 5.9E-181 T 22-04-2016 YPO0588 d4891a9353477c5d85f48760fb099640 395 SUPERFAMILY SSF53335 190 370 1.61E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2098 48c4fe3b1fa2201b9b3d9ae724be47a0 170 Gene3D G3DSA:1.10.530.40 29 169 6.5E-49 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 YPO2098 48c4fe3b1fa2201b9b3d9ae724be47a0 170 PANTHER PTHR38107:SF1 3 170 3.6E-118 T 22-04-2016 YPO2098 48c4fe3b1fa2201b9b3d9ae724be47a0 170 PANTHER PTHR38107 3 170 3.6E-118 T 22-04-2016 YPO2098 48c4fe3b1fa2201b9b3d9ae724be47a0 170 SUPERFAMILY SSF53955 12 169 1.74E-55 T 22-04-2016 IPR023346 Lysozyme-like domain YPO2098 48c4fe3b1fa2201b9b3d9ae724be47a0 170 Pfam PF00959 Phage lysozyme 56 162 5.6E-27 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 YPO0614 410c860a7e7bdf0a6c1ea5dbae9af44d 272 Gene3D G3DSA:1.10.3720.10 5 260 5.3E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0614 410c860a7e7bdf0a6c1ea5dbae9af44d 272 SUPERFAMILY SSF161098 6 267 1.96E-67 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0614 410c860a7e7bdf0a6c1ea5dbae9af44d 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 264 4.8E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0614 410c860a7e7bdf0a6c1ea5dbae9af44d 272 PANTHER PTHR32243 1 272 1.0E-142 T 22-04-2016 YPO0614 410c860a7e7bdf0a6c1ea5dbae9af44d 272 PANTHER PTHR32243:SF8 1 272 1.0E-142 T 22-04-2016 YPO1932 c69ab5cd9c4586907ae161c27f5c8ed4 409 PANTHER PTHR23508:SF18 1 409 1.5E-220 T 22-04-2016 YPO1932 c69ab5cd9c4586907ae161c27f5c8ed4 409 Pfam PF07690 Major Facilitator Superfamily 23 306 1.3E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1932 c69ab5cd9c4586907ae161c27f5c8ed4 409 Gene3D G3DSA:1.20.1250.20 12 196 9.3E-34 T 22-04-2016 YPO1932 c69ab5cd9c4586907ae161c27f5c8ed4 409 PANTHER PTHR23508 1 409 1.5E-220 T 22-04-2016 YPO1932 c69ab5cd9c4586907ae161c27f5c8ed4 409 Gene3D G3DSA:1.20.1250.20 223 407 5.2E-24 T 22-04-2016 YPO1932 c69ab5cd9c4586907ae161c27f5c8ed4 409 SUPERFAMILY SSF103473 11 409 6.28E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1932 c69ab5cd9c4586907ae161c27f5c8ed4 409 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPO2767 8cf783548f0e6631195270410c351170 220 Pfam PF09335 SNARE associated Golgi protein 49 177 8.1E-27 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPO2767 8cf783548f0e6631195270410c351170 220 PANTHER PTHR30353:SF0 1 220 1.3E-102 T 22-04-2016 YPO2767 8cf783548f0e6631195270410c351170 220 PANTHER PTHR30353 1 220 1.3E-102 T 22-04-2016 IPR032818 DedA family YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 PANTHER PTHR11609:SF7 1 379 6.4E-225 T 22-04-2016 YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 SUPERFAMILY SSF51246 319 391 1.73E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 PANTHER PTHR11609 1 379 6.4E-225 T 22-04-2016 YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 SUPERFAMILY SSF52440 3 112 2.45E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 3.4E-186 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.422 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 Pfam PF02222 ATP-grasp domain 123 295 3.0E-55 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 Gene3D G3DSA:3.30.1490.20 124 198 1.7E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 Gene3D G3DSA:3.30.470.20 199 388 1.3E-65 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 Gene3D G3DSA:3.40.50.20 5 120 1.7E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YPO1775 ec705b0aa08f8f8f3973095d0a21b261 393 SUPERFAMILY SSF56059 113 314 8.31E-55 T 22-04-2016 YPO0436 74ad069f88f06f66b5ea8ab7758ef633 265 SUPERFAMILY SSF51569 13 252 1.88E-80 T 22-04-2016 YPO0436 74ad069f88f06f66b5ea8ab7758ef633 265 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 17 238 3.7E-79 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO0436 74ad069f88f06f66b5ea8ab7758ef633 265 SMART SM01133 16 252 3.8E-78 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPO0436 74ad069f88f06f66b5ea8ab7758ef633 265 Gene3D G3DSA:3.20.20.70 14 260 1.8E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0436 74ad069f88f06f66b5ea8ab7758ef633 265 Pfam PF01791 DeoC/LacD family aldolase 18 250 4.5E-45 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPO0436 74ad069f88f06f66b5ea8ab7758ef633 265 PANTHER PTHR10889:SF3 12 263 1.3E-120 T 22-04-2016 YPO0436 74ad069f88f06f66b5ea8ab7758ef633 265 PIRSF PIRSF001357 11 261 1.4E-79 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO0436 74ad069f88f06f66b5ea8ab7758ef633 265 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 7 265 52.645 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO0436 74ad069f88f06f66b5ea8ab7758ef633 265 PANTHER PTHR10889 12 263 1.3E-120 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YPO3375 41a0c80a095a7c77d980ba47b7d1c418 201 Gene3D G3DSA:2.60.40.200 49 201 2.6E-47 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO3375 41a0c80a095a7c77d980ba47b7d1c418 201 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 189 200 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 YPO3375 41a0c80a095a7c77d980ba47b7d1c418 201 SUPERFAMILY SSF49329 50 201 9.69E-50 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO3375 41a0c80a095a7c77d980ba47b7d1c418 201 PANTHER PTHR10003:SF40 41 201 8.8E-51 T 22-04-2016 YPO3375 41a0c80a095a7c77d980ba47b7d1c418 201 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 60 200 1.3E-29 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO3375 41a0c80a095a7c77d980ba47b7d1c418 201 PANTHER PTHR10003 41 201 8.8E-51 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 YPO3375 41a0c80a095a7c77d980ba47b7d1c418 201 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 92 102 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 YPO0723 0ff635671c3af4b0360eb8493163b97c 141 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPO0723 0ff635671c3af4b0360eb8493163b97c 141 Pfam PF00460 Flagella basal body rod protein 8 31 4.7E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO0723 0ff635671c3af4b0360eb8493163b97c 141 PANTHER PTHR30435 1 140 3.2E-62 T 22-04-2016 YPO0723 0ff635671c3af4b0360eb8493163b97c 141 PANTHER PTHR30435:SF2 1 140 3.2E-62 T 22-04-2016 YPO0723 0ff635671c3af4b0360eb8493163b97c 141 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 94 138 1.6E-9 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0723 0ff635671c3af4b0360eb8493163b97c 141 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 139 2.2E-40 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 SMART SM00364 84 106 100.0 T 22-04-2016 YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 SMART SM00364 129 148 0.68 T 22-04-2016 YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 SMART SM00364 108 127 0.019 T 22-04-2016 YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 SMART SM00364 191 210 0.015 T 22-04-2016 YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 SMART SM00364 233 252 6.1 T 22-04-2016 YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 SMART SM00364 171 190 0.48 T 22-04-2016 YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 SMART SM00364 212 231 0.0094 T 22-04-2016 YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 Gene3D G3DSA:3.80.10.10 70 278 1.4E-36 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 SUPERFAMILY SSF52058 70 272 2.35E-23 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPO1006 a7d92de1321b3b7a9376733edc1b53a3 291 Pfam PF12468 Type III secretion system leucine rich repeat protein 1 59 1.4E-20 T 22-04-2016 IPR032674 LRR-containing bacterial E3 ligase, N-terminal KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- YPO1497 65a075d89c0708f01561883b37d47015 222 PANTHER PTHR24220:SF539 3 218 1.3E-144 T 22-04-2016 YPO1497 65a075d89c0708f01561883b37d47015 222 SMART SM00382 30 217 3.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1497 65a075d89c0708f01561883b37d47015 222 PANTHER PTHR24220 3 218 1.3E-144 T 22-04-2016 YPO1497 65a075d89c0708f01561883b37d47015 222 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1497 65a075d89c0708f01561883b37d47015 222 SUPERFAMILY SSF52540 1 218 2.01E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1497 65a075d89c0708f01561883b37d47015 222 Pfam PF00005 ABC transporter 21 169 2.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1497 65a075d89c0708f01561883b37d47015 222 Gene3D G3DSA:3.40.50.300 1 219 4.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1694 2131f33d8f4e441a4d982231b27e80cb 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 78 3.0E-39 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 YPO1694 2131f33d8f4e441a4d982231b27e80cb 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 9.5E-43 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 YPO0269 cc28963ed700f65a938de92c2884d6fe 306 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 227 296 8.7E-14 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO0269 cc28963ed700f65a938de92c2884d6fe 306 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 20 296 2.9E-67 T 22-04-2016 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 YPO0269 cc28963ed700f65a938de92c2884d6fe 306 PRINTS PR00956 Flagellar motor switch protein FliN signature 227 243 4.2E-5 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO0269 cc28963ed700f65a938de92c2884d6fe 306 PRINTS PR00956 Flagellar motor switch protein FliN signature 273 288 4.2E-5 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO0269 cc28963ed700f65a938de92c2884d6fe 306 PRINTS PR00956 Flagellar motor switch protein FliN signature 244 260 4.2E-5 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO0269 cc28963ed700f65a938de92c2884d6fe 306 SUPERFAMILY SSF101801 227 299 2.62E-14 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO0269 cc28963ed700f65a938de92c2884d6fe 306 Gene3D G3DSA:2.30.330.10 227 300 6.9E-16 T 22-04-2016 YPO2242 ed2fb00ef4828aee91d41c98d3e7ce21 351 PANTHER PTHR30578:SF0 1 351 4.7E-172 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 YPO2242 ed2fb00ef4828aee91d41c98d3e7ce21 351 PANTHER PTHR30578 1 351 4.7E-172 T 22-04-2016 YPO2242 ed2fb00ef4828aee91d41c98d3e7ce21 351 Pfam PF03116 NQR2, RnfD, RnfE family 3 345 1.6E-107 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 YPO2242 ed2fb00ef4828aee91d41c98d3e7ce21 351 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 6 346 3.6E-139 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 YPO2242 ed2fb00ef4828aee91d41c98d3e7ce21 351 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 1 347 28.677 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 YPO2444 ace24be9af9f6a516bc461176d46ad44 291 Gene3D G3DSA:3.90.1200.10 96 247 5.2E-13 T 22-04-2016 YPO2444 ace24be9af9f6a516bc461176d46ad44 291 PANTHER PTHR12149:SF8 1 289 5.7E-123 T 22-04-2016 YPO2444 ace24be9af9f6a516bc461176d46ad44 291 Pfam PF03881 Fructosamine kinase 1 285 2.8E-116 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase YPO2444 ace24be9af9f6a516bc461176d46ad44 291 PIRSF PIRSF006221 1 287 1.2E-91 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase YPO2444 ace24be9af9f6a516bc461176d46ad44 291 PANTHER PTHR12149 1 289 5.7E-123 T 22-04-2016 YPO2444 ace24be9af9f6a516bc461176d46ad44 291 Gene3D G3DSA:3.30.200.20 32 90 3.4E-4 T 22-04-2016 YPO2444 ace24be9af9f6a516bc461176d46ad44 291 SUPERFAMILY SSF56112 4 279 2.13E-38 T 22-04-2016 IPR011009 Protein kinase-like domain YPO0738 8587818b9d46a579875055a5d26b03d0 399 Gene3D G3DSA:1.20.1330.10 300 353 1.3E-33 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0738 8587818b9d46a579875055a5d26b03d0 399 Gene3D G3DSA:1.20.1330.10 58 174 1.3E-33 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0738 8587818b9d46a579875055a5d26b03d0 399 PANTHER PTHR30244:SF1 205 398 2.3E-131 T 22-04-2016 YPO0738 8587818b9d46a579875055a5d26b03d0 399 PANTHER PTHR30244:SF1 2 172 2.3E-131 T 22-04-2016 YPO0738 8587818b9d46a579875055a5d26b03d0 399 PANTHER PTHR30244 205 398 2.3E-131 T 22-04-2016 YPO0738 8587818b9d46a579875055a5d26b03d0 399 PANTHER PTHR30244 2 172 2.3E-131 T 22-04-2016 YPO0738 8587818b9d46a579875055a5d26b03d0 399 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 1.2E-27 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0738 8587818b9d46a579875055a5d26b03d0 399 SUPERFAMILY SSF64518 1 398 7.32E-70 T 22-04-2016 YPO0738 8587818b9d46a579875055a5d26b03d0 399 Pfam PF00700 Bacterial flagellin C-terminal helical region 314 396 9.3E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO0738 8587818b9d46a579875055a5d26b03d0 399 PRINTS PR00207 Flagellin signature 76 95 3.2E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO0738 8587818b9d46a579875055a5d26b03d0 399 PRINTS PR00207 Flagellin signature 37 54 3.2E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO0738 8587818b9d46a579875055a5d26b03d0 399 PRINTS PR00207 Flagellin signature 111 134 3.2E-13 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO1490 729a7c908d56c20df834e1e62cac33f0 207 Pfam PF16809 NleF caspase inhibitor 35 195 1.4E-65 T 22-04-2016 IPR031829 Effector protein NleF YPO1162 6d9fe02426db8b10474307f2414d747c 151 SUPERFAMILY SSF54690 6 151 1.57E-53 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1162 6d9fe02426db8b10474307f2414d747c 151 PANTHER PTHR23404 1 151 4.8E-46 T 22-04-2016 YPO1162 6d9fe02426db8b10474307f2414d747c 151 Gene3D G3DSA:3.90.1170.40 4 151 1.4E-55 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1162 6d9fe02426db8b10474307f2414d747c 151 PANTHER PTHR23404:SF2 1 151 4.8E-46 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1162 6d9fe02426db8b10474307f2414d747c 151 Pfam PF02391 MoaE protein 13 122 5.6E-36 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YPO0672 6b490230598c4367a32ae1c3cfcef3b8 243 SUPERFAMILY SSF69593 2 237 4.45E-64 T 22-04-2016 YPO0672 6b490230598c4367a32ae1c3cfcef3b8 243 SMART SM00563 67 182 1.8E-39 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPO0672 6b490230598c4367a32ae1c3cfcef3b8 243 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 5.7E-48 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 YPO0672 6b490230598c4367a32ae1c3cfcef3b8 243 Gene3D G3DSA:3.40.1130.10 45 233 4.8E-19 T 22-04-2016 YPO0672 6b490230598c4367a32ae1c3cfcef3b8 243 Pfam PF01553 Acyltransferase 62 180 3.3E-32 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPO0672 6b490230598c4367a32ae1c3cfcef3b8 243 PANTHER PTHR10434:SF20 1 243 5.8E-172 T 22-04-2016 YPO0672 6b490230598c4367a32ae1c3cfcef3b8 243 PANTHER PTHR10434 1 243 5.8E-172 T 22-04-2016 YPO3311 20a97367813e7579602dc75b056dcb7b 474 Pfam PF02952 L-fucose isomerase, C-terminal domain 343 471 1.9E-37 T 22-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 YPO3311 20a97367813e7579602dc75b056dcb7b 474 SUPERFAMILY SSF53743 7 325 1.83E-64 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 YPO3311 20a97367813e7579602dc75b056dcb7b 474 PANTHER PTHR36120 5 474 1.6E-261 T 22-04-2016 YPO3311 20a97367813e7579602dc75b056dcb7b 474 PANTHER PTHR36120:SF1 5 474 1.6E-261 T 22-04-2016 YPO3349 01df9ca865e9d6335eb3628712c0a408 224 PANTHER PTHR28629 1 220 2.8E-80 T 22-04-2016 YPO3349 01df9ca865e9d6335eb3628712c0a408 224 SUPERFAMILY SSF101473 21 217 2.88E-50 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 YPO3349 01df9ca865e9d6335eb3628712c0a408 224 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 22 215 3.2E-46 T 22-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- YPO3349 01df9ca865e9d6335eb3628712c0a408 224 SMART SM01120 43 216 1.1E-66 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 YPO3349 01df9ca865e9d6335eb3628712c0a408 224 Pfam PF02734 DAK2 domain 43 215 4.3E-51 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 YPO0656 7cd90199f27aa7edd031f861de2aac35 93 Pfam PF04380 Membrane fusogenic activity 1 78 3.0E-28 T 22-04-2016 IPR007475 Membrane fusogenic activity YPO0656 7cd90199f27aa7edd031f861de2aac35 93 PANTHER PTHR38040:SF1 2 93 4.9E-41 T 22-04-2016 YPO0656 7cd90199f27aa7edd031f861de2aac35 93 PANTHER PTHR38040 2 93 4.9E-41 T 22-04-2016 YPO0844 bad259a16cbfe970aad5154289229eb2 284 Gene3D G3DSA:3.20.20.70 1 283 7.5E-111 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0844 bad259a16cbfe970aad5154289229eb2 284 PANTHER PTHR30304 1 283 1.3E-174 T 22-04-2016 YPO0844 bad259a16cbfe970aad5154289229eb2 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO0844 bad259a16cbfe970aad5154289229eb2 284 PANTHER PTHR30304:SF5 1 283 1.3E-174 T 22-04-2016 YPO0844 bad259a16cbfe970aad5154289229eb2 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 1.4E-165 T 22-04-2016 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 YPO0844 bad259a16cbfe970aad5154289229eb2 284 PIRSF PIRSF001359 1 284 3.8E-109 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO0844 bad259a16cbfe970aad5154289229eb2 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 4.6E-100 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO0844 bad259a16cbfe970aad5154289229eb2 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 2.4E-101 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YPO0844 bad259a16cbfe970aad5154289229eb2 284 SUPERFAMILY SSF51569 3 283 2.93E-101 T 22-04-2016 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 Gene3D G3DSA:1.20.120.220 99 274 7.8E-58 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 SUPERFAMILY SSF81336 98 268 9.55E-49 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 42 269 1.6E-43 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 Pfam PF00119 ATP synthase A chain 50 268 3.8E-55 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 PANTHER PTHR11410 141 274 5.5E-115 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 PANTHER PTHR11410 1 125 5.5E-115 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 274 15.972 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 PANTHER PTHR11410:SF7 141 274 5.5E-115 T 22-04-2016 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 PANTHER PTHR11410:SF7 1 125 5.5E-115 T 22-04-2016 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 PRINTS PR00123 ATP synthase A subunit signature 107 123 1.8E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 1.8E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO4127 e339b83b8cbf52b62b3cb4651fe72520 274 PRINTS PR00123 ATP synthase A subunit signature 254 269 1.8E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YPO1427b 3d2b7ea235967788b23f6648971e1326 136 SUPERFAMILY SSF53901 18 112 4.94E-21 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1427b 3d2b7ea235967788b23f6648971e1326 136 Gene3D G3DSA:3.40.47.10 12 112 1.4E-19 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1427b 3d2b7ea235967788b23f6648971e1326 136 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 16 113 5.5E-16 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1427b 3d2b7ea235967788b23f6648971e1326 136 PANTHER PTHR11712 18 112 9.0E-21 T 22-04-2016 YPO1766 5bb6dcda499ffac1ad1a94dc1926107f 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 9.9E-134 T 22-04-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 YPO1766 5bb6dcda499ffac1ad1a94dc1926107f 267 SUPERFAMILY SSF56529 4 267 3.14E-75 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO1766 5bb6dcda499ffac1ad1a94dc1926107f 267 PANTHER PTHR30143 1 267 1.3E-103 T 22-04-2016 YPO1766 5bb6dcda499ffac1ad1a94dc1926107f 267 Gene3D G3DSA:3.90.850.10 2 267 4.0E-82 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO3573 16853790be6d470c07aad82e5e8fbc80 185 PANTHER PTHR33371 1 159 4.1E-48 T 22-04-2016 YPO3573 16853790be6d470c07aad82e5e8fbc80 185 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 3.9E-54 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 YPO3573 16853790be6d470c07aad82e5e8fbc80 185 Pfam PF02470 MlaD protein 39 116 2.5E-18 T 22-04-2016 IPR003399 Mce/MlaD YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 PANTHER PTHR10438:SF266 9 144 5.5E-67 T 22-04-2016 YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 Gene3D G3DSA:3.40.30.10 32 140 5.1E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 TIGRFAM TIGR01068 thioredoxin: thioredoxin 43 138 4.4E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 SUPERFAMILY SSF52833 25 144 8.18E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 Pfam PF00085 Thioredoxin 37 137 1.3E-26 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 PANTHER PTHR10438 9 144 5.5E-67 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 PRINTS PR00421 Thioredoxin family signature 103 114 6.7E-8 T 22-04-2016 YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 PRINTS PR00421 Thioredoxin family signature 63 72 6.7E-8 T 22-04-2016 YPO3270 9e44d2d69f4643ee5a967dde82e2930a 145 PRINTS PR00421 Thioredoxin family signature 55 63 6.7E-8 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 PANTHER PTHR10617:SF103 2 286 3.5E-134 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 PANTHER PTHR10617:SF103 330 396 3.5E-134 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 Gene3D G3DSA:1.10.8.260 270 322 9.2E-24 T 22-04-2016 IPR023166 HI0933 insert-like domain YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 Pfam PF03486 HI0933-like protein 4 392 6.9E-157 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 1.9E-128 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 SUPERFAMILY SSF160996 190 338 3.53E-43 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 3.7E-8 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.7E-8 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 3.7E-8 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 Gene3D G3DSA:2.40.30.10 188 269 5.3E-29 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 SUPERFAMILY SSF51905 3 188 2.6E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 SUPERFAMILY SSF51905 337 395 2.6E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 Gene3D G3DSA:3.50.50.60 339 395 1.2E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 Gene3D G3DSA:3.50.50.60 3 186 1.2E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.8E-5 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 5.8E-5 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 PANTHER PTHR10617 2 286 3.5E-134 T 22-04-2016 YPO3966 c2bd87c49ab360c194ba92acf92cd7b3 398 PANTHER PTHR10617 330 396 3.5E-134 T 22-04-2016 YPO2598 c11b031c550889f9fc70034d0cd85dd5 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.6E-160 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPO2598 c11b031c550889f9fc70034d0cd85dd5 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.033 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPO2598 c11b031c550889f9fc70034d0cd85dd5 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 4.7E-8 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPO2598 c11b031c550889f9fc70034d0cd85dd5 321 SUPERFAMILY SSF102114 53 316 1.7E-68 T 22-04-2016 YPO2598 c11b031c550889f9fc70034d0cd85dd5 321 PANTHER PTHR10949 4 321 2.0E-186 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPO2598 c11b031c550889f9fc70034d0cd85dd5 321 PIRSF PIRSF005963 2 321 4.8E-131 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YPO2598 c11b031c550889f9fc70034d0cd85dd5 321 Gene3D G3DSA:3.20.20.70 55 312 3.9E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2598 c11b031c550889f9fc70034d0cd85dd5 321 SMART SM00729 84 293 1.2E-16 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPO2598 c11b031c550889f9fc70034d0cd85dd5 321 Pfam PF04055 Radical SAM superfamily 91 251 2.8E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO1665 a2a544c3befd459e53249f68d5e98257 427 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 67 7.7E-19 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain YPO1665 a2a544c3befd459e53249f68d5e98257 427 PANTHER PTHR30329:SF2 1 287 1.5E-144 T 22-04-2016 YPO1665 a2a544c3befd459e53249f68d5e98257 427 SUPERFAMILY SSF103088 155 263 1.31E-18 T 22-04-2016 IPR006665 OmpA-like domain YPO1665 a2a544c3befd459e53249f68d5e98257 427 Pfam PF00691 OmpA family 159 253 3.4E-12 T 22-04-2016 IPR006665 OmpA-like domain YPO1665 a2a544c3befd459e53249f68d5e98257 427 Gene3D G3DSA:3.30.1330.60 151 263 1.5E-16 T 22-04-2016 IPR006665 OmpA-like domain YPO1665 a2a544c3befd459e53249f68d5e98257 427 PANTHER PTHR30329 1 287 1.5E-144 T 22-04-2016 YPO4111 1aa4d9b77d8a19deb731db99aae4336b 284 SUPERFAMILY SSF53850 12 262 8.83E-66 T 22-04-2016 YPO4111 1aa4d9b77d8a19deb731db99aae4336b 284 Gene3D G3DSA:3.40.190.10 119 200 1.5E-15 T 22-04-2016 YPO4111 1aa4d9b77d8a19deb731db99aae4336b 284 Gene3D G3DSA:3.40.190.10 222 263 7.8E-40 T 22-04-2016 YPO4111 1aa4d9b77d8a19deb731db99aae4336b 284 Gene3D G3DSA:3.40.190.10 37 118 7.8E-40 T 22-04-2016 YPO4111 1aa4d9b77d8a19deb731db99aae4336b 284 SMART SM00062 40 263 3.3E-63 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO4111 1aa4d9b77d8a19deb731db99aae4336b 284 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPO4111 1aa4d9b77d8a19deb731db99aae4336b 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 261 3.3E-57 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO4111 1aa4d9b77d8a19deb731db99aae4336b 284 PANTHER PTHR18966:SF191 27 279 3.5E-100 T 22-04-2016 YPO4111 1aa4d9b77d8a19deb731db99aae4336b 284 PANTHER PTHR18966 27 279 3.5E-100 T 22-04-2016 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 PANTHER PTHR24078:SF231 1 350 1.2E-175 T 22-04-2016 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF57938 134 211 4.32E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF49493 115 169 4.32E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF49493 213 262 4.32E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 PRINTS PR00625 DnaJ domain signature 25 40 4.17E-32 T 22-04-2016 IPR001623 DnaJ domain YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 PRINTS PR00625 DnaJ domain signature 62 81 4.17E-32 T 22-04-2016 IPR001623 DnaJ domain YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 PRINTS PR00625 DnaJ domain signature 7 25 4.17E-32 T 22-04-2016 IPR001623 DnaJ domain YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 PRINTS PR00625 DnaJ domain signature 42 62 4.17E-32 T 22-04-2016 IPR001623 DnaJ domain YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 PANTHER PTHR24078 1 350 1.2E-175 T 22-04-2016 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:1.10.287.110 1 105 1.9E-36 T 22-04-2016 IPR001623 DnaJ domain YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 Pfam PF00684 DnaJ central domain 147 207 4.3E-16 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:2.60.260.20 256 333 2.1E-24 T 22-04-2016 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:2.10.230.10 141 210 1.1E-26 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF46565 1 108 1.96E-34 T 22-04-2016 IPR001623 DnaJ domain YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:2.60.260.20 211 254 1.4E-21 T 22-04-2016 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 Gene3D G3DSA:2.60.260.20 107 140 1.4E-21 T 22-04-2016 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 Pfam PF00226 DnaJ domain 5 67 5.9E-26 T 22-04-2016 IPR001623 DnaJ domain YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 42.797 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 Pfam PF01556 DnaJ C terminal domain 121 333 3.8E-46 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 1.6E-143 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 SUPERFAMILY SSF49493 259 344 3.53E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YPO0469 91a67e16c6c31a434d097d9eef272ab9 379 SMART SM00271 4 62 4.5E-26 T 22-04-2016 IPR001623 DnaJ domain YPO3292 a1e436bd9273e21431549c822b2d26dd 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.8E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3292 a1e436bd9273e21431549c822b2d26dd 115 Pfam PF01245 Ribosomal protein L19 3 113 9.6E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3292 a1e436bd9273e21431549c822b2d26dd 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3292 a1e436bd9273e21431549c822b2d26dd 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3292 a1e436bd9273e21431549c822b2d26dd 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3292 a1e436bd9273e21431549c822b2d26dd 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3292 a1e436bd9273e21431549c822b2d26dd 115 PIRSF PIRSF002191 1 115 1.6E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3292 a1e436bd9273e21431549c822b2d26dd 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.023 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3292 a1e436bd9273e21431549c822b2d26dd 115 SUPERFAMILY SSF50104 2 114 3.11E-47 T 22-04-2016 IPR008991 Translation protein SH3-like domain YPO3292 a1e436bd9273e21431549c822b2d26dd 115 PANTHER PTHR15680 1 114 1.6E-58 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 3.9E-12 T 22-04-2016 IPR000014 PAS domain YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 PANTHER PTHR32089 190 519 1.8E-142 T 22-04-2016 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 PANTHER PTHR32089 51 170 1.8E-142 T 22-04-2016 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 Gene3D G3DSA:3.30.450.20 23 114 1.1E-21 T 22-04-2016 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 513 2.9E-55 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 SMART SM00086 80 120 0.0025 T 22-04-2016 IPR001610 PAC motif YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 Pfam PF08447 PAS fold 31 114 7.9E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 SMART SM00283 269 516 3.7E-75 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 SUPERFAMILY SSF55785 23 114 6.81E-25 T 22-04-2016 IPR000014 PAS domain YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 Pfam PF00672 HAMP domain 196 264 1.3E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 Gene3D G3DSA:1.10.287.950 284 488 6.9E-56 T 22-04-2016 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 SUPERFAMILY SSF58104 242 516 8.5E-66 T 22-04-2016 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 PANTHER PTHR32089:SF64 190 519 1.8E-142 T 22-04-2016 YPO1644 c9b716c216c36178073ce1fe619cd4e9 526 PANTHER PTHR32089:SF64 51 170 1.8E-142 T 22-04-2016 YPO1557 0715f5db912ff0c31f3fcbf896a70039 463 PANTHER PTHR11785:SF350 17 463 0.0 T 22-04-2016 YPO1557 0715f5db912ff0c31f3fcbf896a70039 463 Pfam PF13520 Amino acid permease 53 417 1.4E-32 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1557 0715f5db912ff0c31f3fcbf896a70039 463 PANTHER PTHR11785 17 463 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1557 0715f5db912ff0c31f3fcbf896a70039 463 PIRSF PIRSF006060 6 457 1.6E-70 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 SMART SM00530 74 128 1.3E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 PANTHER PTHR36511:SF3 59 132 1.4E-52 T 22-04-2016 YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 PANTHER PTHR36511:SF3 3 31 1.4E-52 T 22-04-2016 YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 Gene3D G3DSA:1.10.260.40 75 126 8.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 48 2.6E-15 T 22-04-2016 IPR022453 Zinc finger, MqsA-type YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 SUPERFAMILY SSF47413 64 127 3.07E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 2 132 3.7E-61 T 22-04-2016 IPR032758 Antitoxin MqsA/igA-2 YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 4 132 2.0E-43 T 22-04-2016 IPR022452 Antitoxin MqsA YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 PANTHER PTHR36511 59 132 1.4E-52 T 22-04-2016 YPO0881 43f16cbea8e5ff74004368bbfb90d99f 132 PANTHER PTHR36511 3 31 1.4E-52 T 22-04-2016 YPO0107 0d8dc5858c24909590bd7da36987bcda 281 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 275 1.7E-73 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 YPO0107 0d8dc5858c24909590bd7da36987bcda 281 SUPERFAMILY SSF110997 207 276 4.05E-22 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO0107 0d8dc5858c24909590bd7da36987bcda 281 PANTHER PTHR11064 78 281 4.2E-78 T 22-04-2016 YPO0107 0d8dc5858c24909590bd7da36987bcda 281 Pfam PF05036 Sporulation related domain 207 275 2.1E-19 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO0107 0d8dc5858c24909590bd7da36987bcda 281 Hamap MF_02039 Cell division protein FtsN [ftsN]. 33 281 36.683 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 YPO0107 0d8dc5858c24909590bd7da36987bcda 281 Gene3D G3DSA:3.30.70.1070 202 276 4.1E-30 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO0107 0d8dc5858c24909590bd7da36987bcda 281 PANTHER PTHR11064:SF39 78 281 4.2E-78 T 22-04-2016 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 SMART SM00341 210 289 3.7E-18 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 SUPERFAMILY SSF53098 2 210 4.34E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 PANTHER PTHR12124:SF42 2 369 6.5E-92 T 22-04-2016 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 SUPERFAMILY SSF47819 194 300 4.14E-30 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 SMART SM00474 3 171 1.3E-40 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 Pfam PF00570 HRDC domain 213 279 1.4E-16 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 Pfam PF01612 3'-5' exonuclease 3 168 9.5E-36 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 PANTHER PTHR12124 2 369 6.5E-92 T 22-04-2016 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 3.7E-146 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.681 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 SUPERFAMILY SSF47819 296 371 2.22E-22 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 YPO2075 d31886617773e15a572899dfe0ecc9bb 373 Gene3D G3DSA:3.30.420.10 2 174 6.5E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO0339 74925296c608402b01192e65f8c15aec 856 Pfam PF03272 Putative mucin or carbohydrate-binding module 541 652 9.4E-30 T 22-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 YPO0339 74925296c608402b01192e65f8c15aec 856 Pfam PF03272 Putative mucin or carbohydrate-binding module 736 852 2.7E-28 T 22-04-2016 IPR004954 Putative mucin or carbohydrate-binding domain GO:0016032 YPO0339 74925296c608402b01192e65f8c15aec 856 SMART SM01276 35 338 6.7E-54 T 22-04-2016 IPR031161 Peptidase family M60 domain YPO0339 74925296c608402b01192e65f8c15aec 856 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 121 366 4.8E-15 T 22-04-2016 IPR031161 Peptidase family M60 domain YPO3361 de46632055e46a226b424eff2a2aa0a6 241 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 230 1.2E-73 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3361 de46632055e46a226b424eff2a2aa0a6 241 SUPERFAMILY SSF53448 11 231 5.85E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3361 de46632055e46a226b424eff2a2aa0a6 241 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3361 de46632055e46a226b424eff2a2aa0a6 241 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 233 30.574 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3361 de46632055e46a226b424eff2a2aa0a6 241 PANTHER PTHR32125:SF4 1 234 4.2E-87 T 22-04-2016 YPO3361 de46632055e46a226b424eff2a2aa0a6 241 Gene3D G3DSA:3.90.550.10 10 234 2.7E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3361 de46632055e46a226b424eff2a2aa0a6 241 PANTHER PTHR32125 1 234 4.2E-87 T 22-04-2016 YPO3361 de46632055e46a226b424eff2a2aa0a6 241 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 232 6.5E-82 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YPO3458 50a9544ed1c33d779c28a8d08430a972 208 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 204 2.0E-48 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YPO3458 50a9544ed1c33d779c28a8d08430a972 208 SUPERFAMILY SSF159709 13 207 1.07E-54 T 22-04-2016 YPO3458 50a9544ed1c33d779c28a8d08430a972 208 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 206 1.3E-65 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YPO3458 50a9544ed1c33d779c28a8d08430a972 208 PIRSF PIRSF020680 1 208 3.5E-51 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YPO2737 47862efd253d4265f166b2541b348fbf 100 PANTHER PTHR37531 2 74 5.9E-32 T 22-04-2016 YPO2737 47862efd253d4265f166b2541b348fbf 100 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 3.6E-19 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 YPO2737 47862efd253d4265f166b2541b348fbf 100 PANTHER PTHR37531:SF1 2 74 5.9E-32 T 22-04-2016 YPO2737 47862efd253d4265f166b2541b348fbf 100 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 6.7E-21 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 YPO3983 fc1a9b5432a21ce0a632ce7387c6a13f 289 Pfam PF11692 Protein of unknown function (DUF3289) 18 286 5.6E-116 T 22-04-2016 IPR017483 Conserved hypothetical protein CHP03034 YPO3983 fc1a9b5432a21ce0a632ce7387c6a13f 289 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 17 286 3.7E-129 T 22-04-2016 IPR017483 Conserved hypothetical protein CHP03034 YPO2688 b70e6e99a3c9becba31a0c12ed6bd55c 209 PANTHER PTHR26402 1 209 2.2E-106 T 22-04-2016 YPO2688 b70e6e99a3c9becba31a0c12ed6bd55c 209 Gene3D G3DSA:1.10.10.10 109 208 8.8E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2688 b70e6e99a3c9becba31a0c12ed6bd55c 209 SMART SM00862 131 207 1.2E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2688 b70e6e99a3c9becba31a0c12ed6bd55c 209 Pfam PF00486 Transcriptional regulatory protein, C terminal 131 207 5.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO2688 b70e6e99a3c9becba31a0c12ed6bd55c 209 Pfam PF00072 Response regulator receiver domain 4 97 3.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2688 b70e6e99a3c9becba31a0c12ed6bd55c 209 SUPERFAMILY SSF52172 2 162 1.94E-30 T 22-04-2016 IPR011006 CheY-like superfamily YPO2688 b70e6e99a3c9becba31a0c12ed6bd55c 209 PANTHER PTHR26402:SF399 1 209 2.2E-106 T 22-04-2016 YPO2688 b70e6e99a3c9becba31a0c12ed6bd55c 209 Gene3D G3DSA:3.40.50.2300 3 108 2.0E-29 T 22-04-2016 YPO2688 b70e6e99a3c9becba31a0c12ed6bd55c 209 SMART SM00448 1 96 1.7E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2192 d9ba8f11853742ea1007f1c739ca42e9 98 Gene3D G3DSA:3.30.70.1060 1 98 5.1E-37 T 22-04-2016 YPO2192 d9ba8f11853742ea1007f1c739ca42e9 98 SUPERFAMILY SSF54909 1 98 2.68E-31 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO2192 d9ba8f11853742ea1007f1c739ca42e9 98 PANTHER PTHR33606 1 98 8.0E-36 T 22-04-2016 YPO2192 d9ba8f11853742ea1007f1c739ca42e9 98 Pfam PF03795 YCII-related domain 1 95 3.0E-28 T 22-04-2016 IPR005545 YCII-related YPO0595 f0db71ed9c61e581497021cf1c300c0b 212 Gene3D G3DSA:3.40.50.410 6 168 4.4E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0595 f0db71ed9c61e581497021cf1c300c0b 212 Pfam PF00092 von Willebrand factor type A domain 6 161 1.3E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0595 f0db71ed9c61e581497021cf1c300c0b 212 PIRSF PIRSF020634 1 211 7.7E-90 T 22-04-2016 IPR011392 Tellurite resistance, TerY YPO0595 f0db71ed9c61e581497021cf1c300c0b 212 SUPERFAMILY SSF53300 4 161 7.42E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0595 f0db71ed9c61e581497021cf1c300c0b 212 SMART SM00327 3 182 9.4E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0394 11144a988e920c12929aa6398b003b2e 95 PANTHER PTHR35564 1 95 1.4E-51 T 22-04-2016 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 Pfam PF00672 HAMP domain 200 270 7.1E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 PANTHER PTHR32089:SF63 135 525 2.0E-145 T 22-04-2016 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 SUPERFAMILY SSF58104 241 527 8.89E-60 T 22-04-2016 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 296 325 1.5E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 195 215 1.5E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 11 36 1.5E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 450 479 1.5E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 66 81 1.5E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 431 1.5E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 373 400 1.5E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 521 1.2E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 SMART SM00319 50 185 3.2E-5 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 SMART SM00283 275 522 6.1E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 SMART SM00304 220 274 8.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 SUPERFAMILY SSF47170 31 181 2.35E-40 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 Gene3D G3DSA:1.20.120.30 42 180 1.1E-41 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 PANTHER PTHR32089 135 525 2.0E-145 T 22-04-2016 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 Gene3D G3DSA:1.10.287.950 290 494 4.7E-52 T 22-04-2016 YPO0802 83bf6b536ccfbfe54553535ef3bf8522 547 Pfam PF02203 Tar ligand binding domain homologue 9 177 8.9E-38 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YPO0630 dcaa7040fa874d38d9839edb20b9674c 238 Gene3D G3DSA:1.10.472.60 84 197 2.9E-40 T 22-04-2016 IPR023169 UPF0413, central domain YPO0630 dcaa7040fa874d38d9839edb20b9674c 238 SUPERFAMILY SSF52833 31 236 9.01E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0630 dcaa7040fa874d38d9839edb20b9674c 238 Gene3D G3DSA:3.40.30.10 198 236 2.1E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO0630 dcaa7040fa874d38d9839edb20b9674c 238 Gene3D G3DSA:3.40.30.10 37 83 2.1E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1307 1357e66646a8d61bec2c17d2d1dd6937 362 PANTHER PTHR30106:SF2 3 361 1.6E-158 T 22-04-2016 YPO1307 1357e66646a8d61bec2c17d2d1dd6937 362 Pfam PF03601 Conserved hypothetical protein 698 23 338 1.4E-107 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 YPO1307 1357e66646a8d61bec2c17d2d1dd6937 362 PANTHER PTHR30106 3 361 1.6E-158 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 YPO1307 1357e66646a8d61bec2c17d2d1dd6937 362 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 21 358 9.7E-127 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 YPO3113 df6112abe4e9672145533014cbce1243 437 PANTHER PTHR30244:SF11 277 436 6.8E-241 T 22-04-2016 YPO3113 df6112abe4e9672145533014cbce1243 437 PANTHER PTHR30244:SF11 25 249 6.8E-241 T 22-04-2016 YPO3113 df6112abe4e9672145533014cbce1243 437 Gene3D G3DSA:3.90.1150.10 305 430 1.3E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO3113 df6112abe4e9672145533014cbce1243 437 PANTHER PTHR30244 277 436 6.8E-241 T 22-04-2016 YPO3113 df6112abe4e9672145533014cbce1243 437 PANTHER PTHR30244 25 249 6.8E-241 T 22-04-2016 YPO3113 df6112abe4e9672145533014cbce1243 437 SUPERFAMILY SSF53383 37 433 3.36E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO3113 df6112abe4e9672145533014cbce1243 437 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 43 429 2.0E-117 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO3113 df6112abe4e9672145533014cbce1243 437 Gene3D G3DSA:3.40.640.10 39 304 8.3E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO3113 df6112abe4e9672145533014cbce1243 437 PIRSF PIRSF000390 8 437 3.1E-127 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO2736 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2736 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2736 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2736 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2736 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2736 4ae5871360756b7aec63822ecd95c6cc 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 6.8E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2736 4ae5871360756b7aec63822ecd95c6cc 245 PANTHER PTHR30071 1 221 1.2E-93 T 22-04-2016 YPO2736 4ae5871360756b7aec63822ecd95c6cc 245 Pfam PF01578 Cytochrome C assembly protein 29 184 1.6E-31 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YPO2736 4ae5871360756b7aec63822ecd95c6cc 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 1.4E-82 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2403 50605f0bb652d33cbaa1b7e734bf5515 503 PANTHER PTHR30508 119 503 6.4E-291 T 22-04-2016 YPO2403 50605f0bb652d33cbaa1b7e734bf5515 503 PANTHER PTHR30508 2 99 6.4E-291 T 22-04-2016 YPO2403 50605f0bb652d33cbaa1b7e734bf5515 503 SUPERFAMILY SSF101960 41 86 3.53E-134 T 22-04-2016 YPO2403 50605f0bb652d33cbaa1b7e734bf5515 503 SUPERFAMILY SSF101960 133 500 3.53E-134 T 22-04-2016 YPO2403 50605f0bb652d33cbaa1b7e734bf5515 503 PANTHER PTHR30508:SF1 119 503 6.4E-291 T 22-04-2016 YPO2403 50605f0bb652d33cbaa1b7e734bf5515 503 PANTHER PTHR30508:SF1 2 99 6.4E-291 T 22-04-2016 YPO2403 50605f0bb652d33cbaa1b7e734bf5515 503 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 494 2.5E-193 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 YPO2403 50605f0bb652d33cbaa1b7e734bf5515 503 Pfam PF01458 Uncharacterized protein family (UPF0051) 242 474 6.5E-68 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YPO3531 4fc8c0112c9ddf0974bb7b35d71cbbbd 221 PANTHER PTHR36438 1 221 8.6E-109 T 22-04-2016 YPO3531 4fc8c0112c9ddf0974bb7b35d71cbbbd 221 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 221 47.459 T 22-04-2016 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 YPO3531 4fc8c0112c9ddf0974bb7b35d71cbbbd 221 PANTHER PTHR36438:SF1 1 221 8.6E-109 T 22-04-2016 YPO3531 4fc8c0112c9ddf0974bb7b35d71cbbbd 221 Gene3D G3DSA:1.20.120.520 80 218 4.8E-27 T 22-04-2016 YPO3531 4fc8c0112c9ddf0974bb7b35d71cbbbd 221 Pfam PF04405 Domain of Unknown function (DUF542) 5 59 6.9E-20 T 22-04-2016 IPR019903 Repair of iron centres family YPO3531 4fc8c0112c9ddf0974bb7b35d71cbbbd 221 Pfam PF01814 Hemerythrin HHE cation binding domain 81 217 5.9E-27 T 22-04-2016 IPR012312 Haemerythrin-like YPO3531 4fc8c0112c9ddf0974bb7b35d71cbbbd 221 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 217 1.8E-81 T 22-04-2016 IPR019903 Repair of iron centres family YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:3.30.1360.40 239 332 4.0E-24 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 742 0.0 T 22-04-2016 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:2.120.10.90 497 707 1.3E-23 T 22-04-2016 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 33.855 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 PANTHER PTHR10169 5 523 0.0 T 22-04-2016 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 634 5.7E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 2.0E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:3.90.199.10 31 238 4.0E-105 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 Gene3D G3DSA:3.90.199.10 334 398 4.0E-105 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 SUPERFAMILY SSF56719 32 483 4.84E-153 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 8.4E-133 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 SUPERFAMILY SSF101904 498 741 6.02E-51 T 22-04-2016 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 PANTHER PTHR10169:SF30 5 523 0.0 T 22-04-2016 YPO0671 4c196a703a4c15fd4fdaece72a1ac489 757 SMART SM00434 12 462 2.1E-235 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YPO1902 c71ac5fd43b73d437b3cc95c9f10ba46 193 Pfam PF11198 Protein of unknown function (DUF2857) 6 182 2.6E-63 T 22-04-2016 IPR021364 Protein of unknown function DUF2857 YPO0408 d5e08606a1a56b5c1275025c90beba40 291 PIRSF PIRSF038992 31 288 3.8E-78 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPO0408 d5e08606a1a56b5c1275025c90beba40 291 SUPERFAMILY SSF51569 35 274 1.39E-62 T 22-04-2016 YPO0408 d5e08606a1a56b5c1275025c90beba40 291 PANTHER PTHR11627 69 201 4.3E-18 T 22-04-2016 YPO0408 d5e08606a1a56b5c1275025c90beba40 291 SMART SM01133 51 259 1.1E-28 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPO0408 d5e08606a1a56b5c1275025c90beba40 291 Gene3D G3DSA:3.20.20.70 34 284 3.1E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0408 d5e08606a1a56b5c1275025c90beba40 291 PANTHER PTHR11627:SF18 69 201 4.3E-18 T 22-04-2016 YPO0408 d5e08606a1a56b5c1275025c90beba40 291 Pfam PF01791 DeoC/LacD family aldolase 51 258 1.5E-18 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YPO0554 92d8af04ecb095805205de0df467b41a 400 PANTHER PTHR30474:SF2 10 400 4.4E-192 T 22-04-2016 YPO0554 92d8af04ecb095805205de0df467b41a 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 345 369 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 YPO0554 92d8af04ecb095805205de0df467b41a 400 Pfam PF01098 Cell cycle protein 33 387 3.9E-122 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YPO0554 92d8af04ecb095805205de0df467b41a 400 PANTHER PTHR30474 10 400 4.4E-192 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YPO0554 92d8af04ecb095805205de0df467b41a 400 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 29 396 42.061 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 YPO0554 92d8af04ecb095805205de0df467b41a 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 386 1.7E-134 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 YPO1253 809da73c5753701a3e950a595ac8c761 246 Gene3D G3DSA:3.40.50.10490 61 240 1.5E-31 T 22-04-2016 YPO1253 809da73c5753701a3e950a595ac8c761 246 SUPERFAMILY SSF46689 6 72 2.33E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1253 809da73c5753701a3e950a595ac8c761 246 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 70 2.6E-15 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPO1253 809da73c5753701a3e950a595ac8c761 246 SUPERFAMILY SSF53697 86 230 3.4E-31 T 22-04-2016 YPO1253 809da73c5753701a3e950a595ac8c761 246 Pfam PF01380 SIS domain 108 214 9.6E-17 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO1253 809da73c5753701a3e950a595ac8c761 246 PANTHER PTHR10937:SF9 6 244 1.2E-75 T 22-04-2016 YPO1253 809da73c5753701a3e950a595ac8c761 246 Gene3D G3DSA:1.10.10.10 7 60 3.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1253 809da73c5753701a3e950a595ac8c761 246 PANTHER PTHR10937 6 244 1.2E-75 T 22-04-2016 YPO1057 89e2bb4a240f157a1d04fbd38e1cd106 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 15 391 1.4E-171 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 YPO1057 89e2bb4a240f157a1d04fbd38e1cd106 394 Pfam PF02684 Lipid-A-disaccharide synthetase 20 388 3.5E-142 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 YPO1057 89e2bb4a240f157a1d04fbd38e1cd106 394 PANTHER PTHR30372:SF0 16 393 1.4E-143 T 22-04-2016 YPO1057 89e2bb4a240f157a1d04fbd38e1cd106 394 SUPERFAMILY SSF53756 20 357 1.75E-24 T 22-04-2016 YPO1057 89e2bb4a240f157a1d04fbd38e1cd106 394 PANTHER PTHR30372 16 393 1.4E-143 T 22-04-2016 YPO1057 89e2bb4a240f157a1d04fbd38e1cd106 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 17 393 42.183 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 YPO2221 9f181062188a172cf596fea056c0d92a 890 PRINTS PR00415 Aconitase family signature 279 292 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PRINTS PR00415 Aconitase family signature 217 232 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PRINTS PR00415 Aconitase family signature 493 506 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PRINTS PR00415 Aconitase family signature 293 306 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PRINTS PR00415 Aconitase family signature 431 442 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PRINTS PR00415 Aconitase family signature 146 159 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PRINTS PR00415 Aconitase family signature 203 216 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PRINTS PR00415 Aconitase family signature 170 178 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PRINTS PR00415 Aconitase family signature 372 386 1.0E-43 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PANTHER PTHR11670:SF1 7 393 0.0 T 22-04-2016 YPO2221 9f181062188a172cf596fea056c0d92a 890 PANTHER PTHR11670:SF1 416 650 0.0 T 22-04-2016 YPO2221 9f181062188a172cf596fea056c0d92a 890 PANTHER PTHR11670:SF1 666 711 0.0 T 22-04-2016 YPO2221 9f181062188a172cf596fea056c0d92a 890 PANTHER PTHR11670:SF1 750 890 0.0 T 22-04-2016 YPO2221 9f181062188a172cf596fea056c0d92a 890 Gene3D G3DSA:3.40.1060.10 250 367 2.4E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 890 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 YPO2221 9f181062188a172cf596fea056c0d92a 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 Pfam PF00694 Aconitase C-terminal domain 691 818 8.1E-49 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 Gene3D G3DSA:3.30.499.10 25 249 4.2E-79 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 SUPERFAMILY SSF53732 11 626 3.66E-223 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 Gene3D G3DSA:3.20.19.10 636 889 3.7E-81 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO2221 9f181062188a172cf596fea056c0d92a 890 PANTHER PTHR11670 7 393 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PANTHER PTHR11670 416 650 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PANTHER PTHR11670 666 711 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 PANTHER PTHR11670 750 890 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 Gene3D G3DSA:3.30.499.10 368 575 2.5E-65 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 SUPERFAMILY SSF52016 629 890 5.89E-89 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO2221 9f181062188a172cf596fea056c0d92a 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO2221 9f181062188a172cf596fea056c0d92a 890 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 2.2E-185 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 Pfam PF01464 Transglycosylase SLT domain 480 590 1.1E-33 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 400 466 1.2E-25 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 SUPERFAMILY SSF48435 23 471 1.31E-139 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 Gene3D G3DSA:1.10.1240.20 399 466 2.6E-29 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 PANTHER PTHR21666:SF184 457 639 5.5E-101 T 22-04-2016 YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 SUPERFAMILY SSF53955 473 635 1.97E-50 T 22-04-2016 IPR023346 Lysozyme-like domain YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 Gene3D G3DSA:1.25.20.10 24 384 1.8E-119 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 Gene3D G3DSA:1.10.530.10 469 634 3.6E-51 T 22-04-2016 YPO0452 92857f7c9bf25eb620ee12dea3db96bd 639 PANTHER PTHR21666 457 639 5.5E-101 T 22-04-2016 YPO0241 17b705669bc16a01b0d691933045135d 315 Gene3D G3DSA:3.40.50.170 4 208 1.3E-71 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO0241 17b705669bc16a01b0d691933045135d 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO0241 17b705669bc16a01b0d691933045135d 315 SUPERFAMILY SSF53328 5 207 2.62E-65 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO0241 17b705669bc16a01b0d691933045135d 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 1.1E-111 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO0241 17b705669bc16a01b0d691933045135d 315 SUPERFAMILY SSF50486 208 309 1.88E-36 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 YPO0241 17b705669bc16a01b0d691933045135d 315 PANTHER PTHR11138 2 309 3.5E-121 T 22-04-2016 YPO0241 17b705669bc16a01b0d691933045135d 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 1.8E-31 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO0241 17b705669bc16a01b0d691933045135d 315 Pfam PF00551 Formyl transferase 6 181 3.2E-50 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO0241 17b705669bc16a01b0d691933045135d 315 Gene3D G3DSA:3.10.25.10 210 306 1.5E-36 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO0241 17b705669bc16a01b0d691933045135d 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 36.621 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 2.2E-123 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 PANTHER PTHR11772 2 538 0.0 T 22-04-2016 YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 Pfam PF00733 Asparagine synthase 212 366 2.7E-57 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 Pfam PF00733 Asparagine synthase 367 511 1.6E-40 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 Gene3D G3DSA:3.60.20.10 2 191 1.8E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 Gene3D G3DSA:3.40.50.620 192 510 3.7E-117 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 SUPERFAMILY SSF52402 212 483 1.13E-74 T 22-04-2016 YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.0E-40 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 SUPERFAMILY SSF56235 1 196 1.89E-57 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO2623 8541d1cd6ca788bb775597bdae8c5931 554 PANTHER PTHR11772:SF11 2 538 0.0 T 22-04-2016 YPO3454 5663bb336173ffa5ed230cc044a35e05 712 PANTHER PTHR21075 1 711 0.0 T 22-04-2016 YPO3454 5663bb336173ffa5ed230cc044a35e05 712 Gene3D G3DSA:3.20.70.20 124 685 1.5E-183 T 22-04-2016 YPO3454 5663bb336173ffa5ed230cc044a35e05 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.5E-203 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YPO3454 5663bb336173ffa5ed230cc044a35e05 712 Pfam PF03477 ATP cone domain 4 89 2.5E-19 T 22-04-2016 IPR005144 ATP-cone domain YPO3454 5663bb336173ffa5ed230cc044a35e05 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 6.7E-181 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YPO3454 5663bb336173ffa5ed230cc044a35e05 712 SUPERFAMILY SSF51998 121 687 5.49E-192 T 22-04-2016 YPO3454 5663bb336173ffa5ed230cc044a35e05 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPO0326 166bd993915174e0fd6019331fec8c53 104 SUPERFAMILY SSF54909 1 103 2.1E-37 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO0326 166bd993915174e0fd6019331fec8c53 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 104 1.6E-56 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 YPO0326 166bd993915174e0fd6019331fec8c53 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 31.791 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 YPO0326 166bd993915174e0fd6019331fec8c53 104 Pfam PF05336 Domain of unknown function (DUF718) 3 103 2.4E-28 T 22-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 YPO0326 166bd993915174e0fd6019331fec8c53 104 PANTHER PTHR34389:SF2 1 104 8.9E-60 T 22-04-2016 YPO0326 166bd993915174e0fd6019331fec8c53 104 PANTHER PTHR34389 1 104 8.9E-60 T 22-04-2016 YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 Gene3D G3DSA:1.10.3090.10 122 360 1.0E-57 T 22-04-2016 YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 6.5E-16 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 PANTHER PTHR13734 1 380 1.6E-81 T 22-04-2016 YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 Pfam PF01743 Poly A polymerase head domain 3 122 6.9E-17 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 PIRSF PIRSF000813 1 408 1.5E-200 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 Gene3D G3DSA:3.30.460.10 2 121 2.6E-28 T 22-04-2016 YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 SMART SM00471 224 359 5.6E-4 T 22-04-2016 IPR003607 HD/PDEase domain YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 Pfam PF01966 HD domain 229 310 3.2E-13 T 22-04-2016 IPR006674 HD domain YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.042 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 SUPERFAMILY SSF81891 120 410 3.27E-58 T 22-04-2016 YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 SUPERFAMILY SSF81301 1 119 1.09E-29 T 22-04-2016 YPO0650 c8b90d05f75810cd41595e52e4cc7d30 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.604 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YPO4068 e3798dc254b550841934e270cfe04032 643 PANTHER PTHR30181:SF2 1 614 0.0 T 22-04-2016 YPO4068 e3798dc254b550841934e270cfe04032 643 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 6.5E-182 T 22-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 YPO4068 e3798dc254b550841934e270cfe04032 643 Gene3D G3DSA:3.40.930.10 501 638 1.1E-43 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO4068 e3798dc254b550841934e270cfe04032 643 Gene3D G3DSA:3.40.50.10370 378 472 5.4E-42 T 22-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 YPO4068 e3798dc254b550841934e270cfe04032 643 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 381 457 6.3E-10 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO4068 e3798dc254b550841934e270cfe04032 643 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 637 2.5E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO4068 e3798dc254b550841934e270cfe04032 643 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 543 559 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO4068 e3798dc254b550841934e270cfe04032 643 PANTHER PTHR30181 1 614 0.0 T 22-04-2016 YPO4068 e3798dc254b550841934e270cfe04032 643 SUPERFAMILY SSF55804 500 638 1.01E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YPO4068 e3798dc254b550841934e270cfe04032 643 SUPERFAMILY SSF52794 379 469 3.66E-23 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO4068 e3798dc254b550841934e270cfe04032 643 Pfam PF02378 Phosphotransferase system, EIIC 18 278 1.0E-20 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPO0325 610951319ea2fd167b536c244bad4baf 182 Gene3D G3DSA:2.40.50.140 151 182 5.3E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0325 610951319ea2fd167b536c244bad4baf 182 Gene3D G3DSA:2.40.50.140 4 116 5.3E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0325 610951319ea2fd167b536c244bad4baf 182 PIRSF PIRSF002070 2 163 1.1E-40 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YPO0325 610951319ea2fd167b536c244bad4baf 182 SUPERFAMILY SSF50249 4 182 3.77E-63 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO0325 610951319ea2fd167b536c244bad4baf 182 Pfam PF00436 Single-strand binding protein family 6 112 5.1E-44 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 YPO0325 610951319ea2fd167b536c244bad4baf 182 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.47 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YPO0325 610951319ea2fd167b536c244bad4baf 182 PANTHER PTHR10302 4 182 3.9E-63 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YPO0325 610951319ea2fd167b536c244bad4baf 182 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 182 1.0E-61 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YPO2041 6285204267e111193cebab88fec238f9 194 PANTHER PTHR13256:SF24 9 194 1.6E-89 T 22-04-2016 YPO2041 6285204267e111193cebab88fec238f9 194 Gene3D G3DSA:3.40.630.30 8 187 2.4E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2041 6285204267e111193cebab88fec238f9 194 PANTHER PTHR13256 9 194 1.6E-89 T 22-04-2016 YPO2041 6285204267e111193cebab88fec238f9 194 SUPERFAMILY SSF55729 12 186 2.47E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2041 6285204267e111193cebab88fec238f9 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 1.6E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO1505 70e9f5f46b991fa4175c8b0fd70bd1d9 220 SUPERFAMILY SSF55620 5 219 1.85E-74 T 22-04-2016 YPO1505 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Gene3D G3DSA:1.10.286.10 4 84 3.1E-31 T 22-04-2016 YPO1505 70e9f5f46b991fa4175c8b0fd70bd1d9 220 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 9.4E-85 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPO1505 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Gene3D G3DSA:3.30.1130.10 90 218 4.6E-51 T 22-04-2016 YPO1505 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.834 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPO1505 70e9f5f46b991fa4175c8b0fd70bd1d9 220 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPO1505 70e9f5f46b991fa4175c8b0fd70bd1d9 220 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPO1505 70e9f5f46b991fa4175c8b0fd70bd1d9 220 Pfam PF01227 GTP cyclohydrolase I 38 216 4.9E-63 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPO1505 70e9f5f46b991fa4175c8b0fd70bd1d9 220 PANTHER PTHR11109 1 220 1.4E-107 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YPO0329 83a294ac4ad6595c6277187d55e9f49a 418 SUPERFAMILY SSF51658 5 418 2.71E-83 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO0329 83a294ac4ad6595c6277187d55e9f49a 418 Pfam PF06134 L-rhamnose isomerase (RhaA) 4 418 4.3E-228 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 YPO0329 83a294ac4ad6595c6277187d55e9f49a 418 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 9.3E-236 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 YPO0329 83a294ac4ad6595c6277187d55e9f49a 418 Gene3D G3DSA:3.20.20.150 2 418 8.3E-223 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO0329 83a294ac4ad6595c6277187d55e9f49a 418 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 22-04-2016 YPO0329 83a294ac4ad6595c6277187d55e9f49a 418 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 418 276.585 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 YPO0329 83a294ac4ad6595c6277187d55e9f49a 418 PANTHER PTHR30268 1 418 1.4E-227 T 22-04-2016 YPO3793 bb172f88716d37773df4154454900a00 357 SUPERFAMILY SSF50331 237 355 4.62E-26 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO3793 bb172f88716d37773df4154454900a00 357 Gene3D G3DSA:3.40.50.300 3 235 1.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3793 bb172f88716d37773df4154454900a00 357 Gene3D G3DSA:2.40.50.100 240 282 5.9E-8 T 22-04-2016 YPO3793 bb172f88716d37773df4154454900a00 357 Gene3D G3DSA:2.40.50.100 341 355 5.9E-8 T 22-04-2016 YPO3793 bb172f88716d37773df4154454900a00 357 PANTHER PTHR24220 5 292 4.7E-169 T 22-04-2016 YPO3793 bb172f88716d37773df4154454900a00 357 Pfam PF00005 ABC transporter 21 162 1.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3793 bb172f88716d37773df4154454900a00 357 PANTHER PTHR24220:SF151 5 292 4.7E-169 T 22-04-2016 YPO3793 bb172f88716d37773df4154454900a00 357 SUPERFAMILY SSF52540 4 243 4.38E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3793 bb172f88716d37773df4154454900a00 357 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3793 bb172f88716d37773df4154454900a00 357 SMART SM00382 29 212 3.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3793 bb172f88716d37773df4154454900a00 357 Gene3D G3DSA:2.40.50.140 283 339 2.8E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3793 bb172f88716d37773df4154454900a00 357 Pfam PF08402 TOBE domain 278 347 6.2E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 Gene3D G3DSA:3.40.190.10 39 158 2.5E-32 T 22-04-2016 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 SUPERFAMILY SSF53850 36 402 5.02E-93 T 22-04-2016 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 Gene3D G3DSA:3.40.190.10 159 329 2.8E-55 T 22-04-2016 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 Pfam PF13416 Bacterial extracellular solute-binding protein 57 350 1.9E-40 T 22-04-2016 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PANTHER PTHR30061 12 403 2.1E-141 T 22-04-2016 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PANTHER PTHR30061:SF21 12 403 2.1E-141 T 22-04-2016 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 137 156 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 178 197 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 43 61 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 306 327 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 364 383 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 240 259 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 158 177 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 PRINTS PR00181 Maltose binding protein signature 77 95 2.9E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YPO3714 47f5265ac074807bb1422c1a1af57ff4 403 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 YPO1431 a1555d1b0ea5290616409dd819fc8766 590 Pfam PF13654 AAA domain 139 328 2.9E-20 T 22-04-2016 YPO1431 a1555d1b0ea5290616409dd819fc8766 590 PANTHER PTHR10046 137 551 2.2E-163 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 YPO1431 a1555d1b0ea5290616409dd819fc8766 590 SUPERFAMILY SSF54211 354 545 3.79E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1431 a1555d1b0ea5290616409dd819fc8766 590 Gene3D G3DSA:3.30.230.10 346 546 2.7E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO1431 a1555d1b0ea5290616409dd819fc8766 590 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 440 541 3.8E-10 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 YPO1431 a1555d1b0ea5290616409dd819fc8766 590 PANTHER PTHR10046:SF49 137 551 2.2E-163 T 22-04-2016 YPO1431 a1555d1b0ea5290616409dd819fc8766 590 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 497 515 9.8E-9 T 22-04-2016 YPO1431 a1555d1b0ea5290616409dd819fc8766 590 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 437 456 9.8E-9 T 22-04-2016 YPO1431 a1555d1b0ea5290616409dd819fc8766 590 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 467 486 9.8E-9 T 22-04-2016 YPO1077 6c71531046d9384ca6d03144ab125465 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 54 251 2.5E-9 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPO1077 6c71531046d9384ca6d03144ab125465 260 SUPERFAMILY SSF56219 43 258 3.66E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPO1077 6c71531046d9384ca6d03144ab125465 260 Gene3D G3DSA:3.60.10.10 43 259 1.5E-6 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 SUPERFAMILY SSF52540 1 238 1.45E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 SUPERFAMILY SSF52540 413 496 1.45E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 Gene3D G3DSA:3.40.50.300 257 350 2.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 PANTHER PTHR32114 2 731 4.3E-111 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 PANTHER PTHR32114 817 1225 4.3E-111 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 Pfam PF13476 AAA domain 5 237 3.6E-27 T 22-04-2016 YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 PANTHER PTHR32114:SF2 2 731 4.3E-111 T 22-04-2016 YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 PANTHER PTHR32114:SF2 817 1225 4.3E-111 T 22-04-2016 YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 Gene3D G3DSA:3.40.50.300 1114 1201 9.5E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 SUPERFAMILY SSF52540 1004 1199 1.25E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1110 1181 2.8E-15 T 22-04-2016 YPO3207 c7ac8c68fb39574ef1c831b8630c4f4b 1235 Gene3D G3DSA:3.40.50.300 1 163 1.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0954 fac182713896752e77c602038a14e44f 358 Pfam PF01464 Transglycosylase SLT domain 195 316 1.1E-32 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YPO0954 fac182713896752e77c602038a14e44f 358 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YPO0954 fac182713896752e77c602038a14e44f 358 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 357 60.613 T 22-04-2016 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 YPO0954 fac182713896752e77c602038a14e44f 358 PANTHER PTHR21666:SF224 174 357 6.7E-56 T 22-04-2016 YPO0954 fac182713896752e77c602038a14e44f 358 Gene3D G3DSA:1.10.530.10 186 357 2.2E-41 T 22-04-2016 YPO0954 fac182713896752e77c602038a14e44f 358 Pfam PF11873 Domain of unknown function (DUF3393) 3 190 6.5E-78 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal YPO0954 fac182713896752e77c602038a14e44f 358 SUPERFAMILY SSF53955 154 356 8.73E-36 T 22-04-2016 IPR023346 Lysozyme-like domain YPO0954 fac182713896752e77c602038a14e44f 358 PANTHER PTHR21666 174 357 6.7E-56 T 22-04-2016 YPO0457 66844b7c179158fcbce27dfc838788dd 155 PIRSF PIRSF003174 1 155 2.1E-66 T 22-04-2016 IPR010292 Uncharacterised protein family CreA YPO0457 66844b7c179158fcbce27dfc838788dd 155 Pfam PF05981 CreA protein 24 155 2.0E-57 T 22-04-2016 IPR010292 Uncharacterised protein family CreA YPO0457 66844b7c179158fcbce27dfc838788dd 155 PANTHER PTHR37952:SF2 1 155 2.1E-89 T 22-04-2016 YPO0457 66844b7c179158fcbce27dfc838788dd 155 PANTHER PTHR37952 1 155 2.1E-89 T 22-04-2016 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 TIGRFAM TIGR00422 valS: valine--tRNA ligase 16 945 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Gene3D G3DSA:1.10.730.10 645 830 9.4E-66 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Gene3D G3DSA:1.10.287.380 892 950 1.1E-7 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Gene3D G3DSA:3.40.50.620 378 585 4.0E-140 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Gene3D G3DSA:3.40.50.620 17 207 4.0E-140 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Gene3D G3DSA:3.40.50.620 623 644 4.0E-140 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Pfam PF08264 Anticodon-binding domain of tRNA 688 839 1.1E-43 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 SUPERFAMILY SSF50677 205 379 1.44E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PANTHER PTHR11946 622 874 0.0 T 22-04-2016 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PANTHER PTHR11946 894 956 0.0 T 22-04-2016 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PANTHER PTHR11946 6 584 0.0 T 22-04-2016 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Gene3D G3DSA:3.90.740.10 208 374 1.3E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 1.2E-226 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 900 958 5.3E-17 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 SUPERFAMILY SSF46589 898 962 7.32E-16 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 SUPERFAMILY SSF52374 378 585 1.77E-136 T 22-04-2016 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 SUPERFAMILY SSF52374 14 206 1.77E-136 T 22-04-2016 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 SUPERFAMILY SSF52374 623 655 1.77E-136 T 22-04-2016 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 963 16.201 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PANTHER PTHR11946:SF5 622 874 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PANTHER PTHR11946:SF5 894 956 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PANTHER PTHR11946:SF5 6 584 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 SUPERFAMILY SSF47323 656 913 4.86E-72 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PRINTS PR00986 Valyl-tRNA synthetase signature 483 504 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PRINTS PR00986 Valyl-tRNA synthetase signature 383 396 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO3443 0a4a19bbefe4ea3a29ab36294e82b974 965 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YPO1516 a9ed51dd8601f6987c44fd6a316343ba 418 SUPERFAMILY SSF51004 16 94 4.71E-9 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YPO1516 a9ed51dd8601f6987c44fd6a316343ba 418 SUPERFAMILY SSF51004 138 319 4.71E-9 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YPO1516 a9ed51dd8601f6987c44fd6a316343ba 418 Pfam PF08309 LVIVD repeat 222 250 0.34 T 22-04-2016 IPR013211 LVIVD YPO2392 aaf62963985984edcbdd28a94776fba1 457 PIRSF PIRSF006603 5 455 1.3E-62 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO2392 aaf62963985984edcbdd28a94776fba1 457 Pfam PF01554 MatE 17 177 1.5E-37 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO2392 aaf62963985984edcbdd28a94776fba1 457 Pfam PF01554 MatE 244 405 5.6E-37 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO2392 aaf62963985984edcbdd28a94776fba1 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 51.021 T 22-04-2016 IPR022913 Multidrug resistance protein MdtK YPO2392 aaf62963985984edcbdd28a94776fba1 457 PANTHER PTHR11206 2 446 3.9E-236 T 22-04-2016 YPO2392 aaf62963985984edcbdd28a94776fba1 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 2.3E-119 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO2392 aaf62963985984edcbdd28a94776fba1 457 PANTHER PTHR11206:SF153 2 446 3.9E-236 T 22-04-2016 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 261 2.9E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 PANTHER PTHR24423:SF564 2 92 1.5E-144 T 22-04-2016 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 PANTHER PTHR24423:SF564 143 419 1.5E-144 T 22-04-2016 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 SMART SM00388 202 262 2.1E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 Pfam PF00672 HAMP domain 132 197 6.3E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 SMART SM00387 306 416 2.5E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 355 3.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 369 3.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 413 3.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 3.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 413 1.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 Gene3D G3DSA:1.10.287.130 192 258 7.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 Gene3D G3DSA:3.30.565.10 264 416 1.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 SUPERFAMILY SSF55874 251 414 9.3E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 SUPERFAMILY SSF47384 185 262 1.43E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 SMART SM00304 149 201 1.1E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 PANTHER PTHR24423 2 92 1.5E-144 T 22-04-2016 YPO2309 60112f4f86f24574e1edc9e1e9800aed 425 PANTHER PTHR24423 143 419 1.5E-144 T 22-04-2016 YPO3080 fea2db2b9f85101ee7cc459ac5dce5b5 212 PANTHER PTHR30383:SF5 27 205 1.6E-45 T 22-04-2016 YPO3080 fea2db2b9f85101ee7cc459ac5dce5b5 212 PANTHER PTHR30383 27 205 1.6E-45 T 22-04-2016 YPO3080 fea2db2b9f85101ee7cc459ac5dce5b5 212 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 31 41 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 YPO3080 fea2db2b9f85101ee7cc459ac5dce5b5 212 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 191 3.3E-24 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YPO3080 fea2db2b9f85101ee7cc459ac5dce5b5 212 SUPERFAMILY SSF52266 30 207 9.73E-50 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YPO3080 fea2db2b9f85101ee7cc459ac5dce5b5 212 Gene3D G3DSA:3.40.50.1110 29 207 1.8E-54 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YPO1286 66d8143eab340328fec0d0ed33a195c4 84 PANTHER PTHR36931 1 84 1.8E-39 T 22-04-2016 YPO1286 66d8143eab340328fec0d0ed33a195c4 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 60 7.7E-5 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein YPO2609 150956a1e3a738c7b064580ec4fba705 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 164 27.689 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 YPO2609 150956a1e3a738c7b064580ec4fba705 207 PANTHER PTHR38098 1 207 6.3E-78 T 22-04-2016 YPO2609 150956a1e3a738c7b064580ec4fba705 207 Gene3D G3DSA:3.30.160.150 20 171 1.1E-61 T 22-04-2016 YPO2609 150956a1e3a738c7b064580ec4fba705 207 PANTHER PTHR38098:SF1 1 207 6.3E-78 T 22-04-2016 YPO2609 150956a1e3a738c7b064580ec4fba705 207 Pfam PF04390 Lipopolysaccharide-assembly 12 159 5.1E-20 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 YPO1111 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF56425 236 356 6.58E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPO1111 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF46977 452 588 9.29E-45 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPO1111 c9d089ca7f028fda207b61052653c369 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 5.8E-276 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPO1111 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:3.50.50.60 351 425 8.3E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1111 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:3.50.50.60 6 242 8.3E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1111 c9d089ca7f028fda207b61052653c369 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 YPO1111 c9d089ca7f028fda207b61052653c369 588 Pfam PF00890 FAD binding domain 9 405 3.9E-117 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPO1111 c9d089ca7f028fda207b61052653c369 588 PANTHER PTHR11632:SF5 1 573 0.0 T 22-04-2016 YPO1111 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF51905 359 438 1.87E-77 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1111 c9d089ca7f028fda207b61052653c369 588 SUPERFAMILY SSF51905 5 259 1.87E-77 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO1111 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:1.20.58.100 433 547 1.3E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPO1111 c9d089ca7f028fda207b61052653c369 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 4.3E-242 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPO1111 c9d089ca7f028fda207b61052653c369 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.1E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPO1111 c9d089ca7f028fda207b61052653c369 588 PANTHER PTHR11632 1 573 0.0 T 22-04-2016 YPO1111 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:3.90.700.10 243 349 4.5E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPO1111 c9d089ca7f028fda207b61052653c369 588 Gene3D G3DSA:4.10.80.40 548 588 1.3E-20 T 22-04-2016 YPO1111 c9d089ca7f028fda207b61052653c369 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.0E-5 T 22-04-2016 YPO1111 c9d089ca7f028fda207b61052653c369 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.0E-5 T 22-04-2016 YPO1111 c9d089ca7f028fda207b61052653c369 588 PIRSF PIRSF000171 1 580 1.6E-46 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit YPO1572 eea113e70b6baebe8ab56acde6e5ecf6 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPO1572 eea113e70b6baebe8ab56acde6e5ecf6 446 PANTHER PTHR23508:SF8 1 446 2.0E-263 T 22-04-2016 YPO1572 eea113e70b6baebe8ab56acde6e5ecf6 446 Pfam PF07690 Major Facilitator Superfamily 30 364 5.1E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1572 eea113e70b6baebe8ab56acde6e5ecf6 446 SUPERFAMILY SSF103473 13 438 3.27E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1572 eea113e70b6baebe8ab56acde6e5ecf6 446 PANTHER PTHR23508 1 446 2.0E-263 T 22-04-2016 YPO1572 eea113e70b6baebe8ab56acde6e5ecf6 446 Gene3D G3DSA:1.20.1250.20 259 442 1.6E-17 T 22-04-2016 YPO1572 eea113e70b6baebe8ab56acde6e5ecf6 446 Gene3D G3DSA:1.20.1250.20 25 211 1.2E-23 T 22-04-2016 YPO1295 6808b89457839909fc3ca39d30a96e1e 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 320 1.6E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO1295 6808b89457839909fc3ca39d30a96e1e 332 PANTHER PTHR32196 1 330 2.5E-178 T 22-04-2016 YPO1295 6808b89457839909fc3ca39d30a96e1e 332 PANTHER PTHR32196:SF34 1 330 2.5E-178 T 22-04-2016 YPO1553 7cbc3d046d43f34a6f88988ea12a8601 331 PANTHER PTHR32196:SF21 2 331 8.9E-122 T 22-04-2016 YPO1553 7cbc3d046d43f34a6f88988ea12a8601 331 PANTHER PTHR32196 2 331 8.9E-122 T 22-04-2016 YPO1553 7cbc3d046d43f34a6f88988ea12a8601 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 322 9.6E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 PANTHER PTHR30244:SF1 279 368 1.2E-143 T 22-04-2016 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 PANTHER PTHR30244:SF1 2 260 1.2E-143 T 22-04-2016 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 PANTHER PTHR30244 279 368 1.2E-143 T 22-04-2016 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 PANTHER PTHR30244 2 260 1.2E-143 T 22-04-2016 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 PRINTS PR00207 Flagellin signature 110 133 7.2E-31 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 PRINTS PR00207 Flagellin signature 36 53 7.2E-31 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 PRINTS PR00207 Flagellin signature 75 94 7.2E-31 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 2.1E-43 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 Gene3D G3DSA:1.20.1330.10 53 169 6.8E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 Gene3D G3DSA:1.20.1330.10 270 325 6.8E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 Pfam PF00700 Bacterial flagellin C-terminal helical region 284 368 2.5E-32 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YPO1842 777a75ff8c827836be3d03ec58e7bdd2 369 SUPERFAMILY SSF64518 1 368 1.44E-106 T 22-04-2016 YPO0679 72a32b2082a4eb093c03b93fa4d7c6e4 297 SUPERFAMILY SSF46689 244 290 1.12E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0679 72a32b2082a4eb093c03b93fa4d7c6e4 297 SUPERFAMILY SSF46689 191 242 5.24E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0679 72a32b2082a4eb093c03b93fa4d7c6e4 297 Gene3D G3DSA:1.10.10.60 247 289 5.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0679 72a32b2082a4eb093c03b93fa4d7c6e4 297 Pfam PF12833 Helix-turn-helix domain 214 289 1.0E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0679 72a32b2082a4eb093c03b93fa4d7c6e4 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 29 179 5.3E-41 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal YPO0679 72a32b2082a4eb093c03b93fa4d7c6e4 297 Gene3D G3DSA:1.10.10.60 192 246 5.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0679 72a32b2082a4eb093c03b93fa4d7c6e4 297 SMART SM00342 208 291 2.5E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0679 72a32b2082a4eb093c03b93fa4d7c6e4 297 PANTHER PTHR11019:SF134 1 296 2.1E-173 T 22-04-2016 YPO0679 72a32b2082a4eb093c03b93fa4d7c6e4 297 PANTHER PTHR11019 1 296 2.1E-173 T 22-04-2016 YPO0121 65d29456be7fba06f68c7e7737a98bb7 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 2.2E-28 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 YPO0121 65d29456be7fba06f68c7e7737a98bb7 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 271 4.7E-121 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 YPO0121 65d29456be7fba06f68c7e7737a98bb7 278 Pfam PF01694 Rhomboid family 132 271 4.1E-30 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 YPO0121 65d29456be7fba06f68c7e7737a98bb7 278 Gene3D G3DSA:1.20.1540.10 96 268 7.4E-36 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 YPO0121 65d29456be7fba06f68c7e7737a98bb7 278 SUPERFAMILY SSF144091 94 271 2.09E-43 T 22-04-2016 YPO0121 65d29456be7fba06f68c7e7737a98bb7 278 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 277 52.258 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 YPO0121 65d29456be7fba06f68c7e7737a98bb7 278 PANTHER PTHR22936 1 275 1.1E-105 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 YPO0121 65d29456be7fba06f68c7e7737a98bb7 278 PANTHER PTHR22936:SF30 1 275 1.1E-105 T 22-04-2016 YPO3166 74551218fb637163cb9b5703efd00a34 204 PANTHER PTHR11403 8 204 5.0E-123 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 YPO3166 74551218fb637163cb9b5703efd00a34 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 1.9E-14 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 YPO3166 74551218fb637163cb9b5703efd00a34 204 SUPERFAMILY SSF81452 21 202 7.19E-58 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 YPO3166 74551218fb637163cb9b5703efd00a34 204 Gene3D G3DSA:1.20.120.80 25 202 8.4E-52 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 YPO3166 74551218fb637163cb9b5703efd00a34 204 PANTHER PTHR11403:SF2 8 204 5.0E-123 T 22-04-2016 YPO3166 74551218fb637163cb9b5703efd00a34 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 2.3E-86 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 YPO2947 c8370417cda604aa709d188bb849b7d3 626 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 623 6.2E-201 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO2947 c8370417cda604aa709d188bb849b7d3 626 PIRSF PIRSF028304 1 626 2.9E-157 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO2947 c8370417cda604aa709d188bb849b7d3 626 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 1.3E-196 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO2947 c8370417cda604aa709d188bb849b7d3 626 PANTHER PTHR35370 2 626 0.0 T 22-04-2016 YPO2947 c8370417cda604aa709d188bb849b7d3 626 PANTHER PTHR35370:SF2 2 626 0.0 T 22-04-2016 YPO1919 741c269dd43678d014ebd71ff90f569d 449 Pfam PF00419 Fimbrial protein 263 449 1.6E-33 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO1919 741c269dd43678d014ebd71ff90f569d 449 Gene3D G3DSA:2.60.40.1090 269 444 7.8E-4 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO1919 741c269dd43678d014ebd71ff90f569d 449 PIRSF PIRSF029766 1 449 1.2E-196 T 22-04-2016 IPR011228 Uncharacterised conserved protein UCP029766 YPO1919 741c269dd43678d014ebd71ff90f569d 449 SUPERFAMILY SSF49401 407 446 7.95E-8 T 22-04-2016 IPR008966 Adhesion domain YPO1919 741c269dd43678d014ebd71ff90f569d 449 SUPERFAMILY SSF49401 269 377 7.95E-8 T 22-04-2016 IPR008966 Adhesion domain YPO3088 837c1b1d51e33e7e572413a70d0971b2 159 PIRSF PIRSF006181 1 159 1.2E-54 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPO3088 837c1b1d51e33e7e572413a70d0971b2 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 145 5.4E-24 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPO3088 837c1b1d51e33e7e572413a70d0971b2 159 Gene3D G3DSA:3.90.960.10 1 157 2.1E-59 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPO3088 837c1b1d51e33e7e572413a70d0971b2 159 PANTHER PTHR30411:SF0 1 158 5.2E-73 T 22-04-2016 YPO3088 837c1b1d51e33e7e572413a70d0971b2 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 3.1E-54 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPO3088 837c1b1d51e33e7e572413a70d0971b2 159 PANTHER PTHR30411 1 158 5.2E-73 T 22-04-2016 YPO3088 837c1b1d51e33e7e572413a70d0971b2 159 SUPERFAMILY SSF55826 2 155 3.14E-44 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YPO2552 73f059fe65dc21f82eadabb5ff00e35d 172 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 129 147 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 YPO2552 73f059fe65dc21f82eadabb5ff00e35d 172 PIRSF PIRSF000216 3 172 3.5E-53 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 YPO2552 73f059fe65dc21f82eadabb5ff00e35d 172 PANTHER PTHR10371:SF7 1 171 1.8E-123 T 22-04-2016 YPO2552 73f059fe65dc21f82eadabb5ff00e35d 172 PANTHER PTHR10371 1 171 1.8E-123 T 22-04-2016 YPO2552 73f059fe65dc21f82eadabb5ff00e35d 172 Gene3D G3DSA:3.40.30.10 92 170 2.5E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2552 73f059fe65dc21f82eadabb5ff00e35d 172 SUPERFAMILY SSF52833 21 171 3.47E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2552 73f059fe65dc21f82eadabb5ff00e35d 172 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 30 171 1.5E-50 T 22-04-2016 YPO2552 73f059fe65dc21f82eadabb5ff00e35d 172 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 28 171 5.3E-53 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 YPO3607 1e50d7a463af7f1cc9ea0facfaab91c6 152 Gene3D G3DSA:3.40.1000.10 6 147 5.9E-44 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO3607 1e50d7a463af7f1cc9ea0facfaab91c6 152 Pfam PF08786 Domain of unknown function (DUF1795) 13 141 1.6E-39 T 22-04-2016 IPR014894 Protein DcrB YPO3607 1e50d7a463af7f1cc9ea0facfaab91c6 152 SUPERFAMILY SSF55724 6 146 3.98E-46 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO2067 c3561f73d268a220a8046db2b108f9a9 213 PANTHER PTHR30246 1 209 3.2E-135 T 22-04-2016 YPO2067 c3561f73d268a220a8046db2b108f9a9 213 SUPERFAMILY SSF51569 4 209 4.76E-70 T 22-04-2016 YPO2067 c3561f73d268a220a8046db2b108f9a9 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YPO2067 c3561f73d268a220a8046db2b108f9a9 213 Gene3D G3DSA:3.20.20.70 2 210 1.8E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2067 c3561f73d268a220a8046db2b108f9a9 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 YPO2067 c3561f73d268a220a8046db2b108f9a9 213 PANTHER PTHR30246:SF0 1 209 3.2E-135 T 22-04-2016 YPO2067 c3561f73d268a220a8046db2b108f9a9 213 Pfam PF01081 KDPG and KHG aldolase 9 203 1.2E-90 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YPO2067 c3561f73d268a220a8046db2b108f9a9 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 5.5E-86 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YPO2976 a0740b757a5507a148c354a972854a00 415 PANTHER PTHR30613:SF4 4 413 2.8E-301 T 22-04-2016 YPO2976 a0740b757a5507a148c354a972854a00 415 SUPERFAMILY SSF51197 3 413 2.84E-153 T 22-04-2016 YPO2976 a0740b757a5507a148c354a972854a00 415 Pfam PF07350 Protein of unknown function (DUF1479) 8 412 2.1E-147 T 22-04-2016 IPR010856 Protein of unknown function DUF1479 YPO2976 a0740b757a5507a148c354a972854a00 415 Gene3D G3DSA:2.60.120.330 5 413 4.8E-155 T 22-04-2016 IPR027443 Isopenicillin N synthase-like YPO2976 a0740b757a5507a148c354a972854a00 415 PANTHER PTHR30613 4 413 2.8E-301 T 22-04-2016 YPO2790 dc9559b6c8f2d7d0160835f36e83e411 133 Pfam PF06836 Protein of unknown function (DUF1240) 39 132 2.2E-38 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 2.6E-92 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 PANTHER PTHR11079 1 317 8.0E-168 T 22-04-2016 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 SUPERFAMILY SSF55120 95 311 6.72E-64 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 Pfam PF00849 RNA pseudouridylate synthase 102 249 2.2E-30 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 PANTHER PTHR11079:SF84 1 317 8.0E-168 T 22-04-2016 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 Gene3D G3DSA:3.10.290.10 20 68 2.4E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 SUPERFAMILY SSF55174 19 70 2.21E-8 T 22-04-2016 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 SMART SM00363 20 79 2.7E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO1591 9928f9cb9871a7a28ef12d91536300e8 320 Pfam PF01479 S4 domain 20 66 2.2E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO0411 1e10901849b18c6f7a931e319b1a9bf8 351 PANTHER PTHR32196:SF29 1 325 2.7E-185 T 22-04-2016 YPO0411 1e10901849b18c6f7a931e319b1a9bf8 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 301 3.1E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO0411 1e10901849b18c6f7a931e319b1a9bf8 351 PANTHER PTHR32196 1 325 2.7E-185 T 22-04-2016 YPO2037 ab978e509b3480bebb13bdffe429d1ea 245 PANTHER PTHR36928 1 245 1.3E-115 T 22-04-2016 YPO2037 ab978e509b3480bebb13bdffe429d1ea 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.351 T 22-04-2016 IPR023710 Probable phosphatase YcdX GO:0008270 YPO2037 ab978e509b3480bebb13bdffe429d1ea 245 Gene3D G3DSA:3.20.20.140 1 235 4.8E-59 T 22-04-2016 YPO2037 ab978e509b3480bebb13bdffe429d1ea 245 SUPERFAMILY SSF89550 3 241 7.98E-62 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YPO2037 ab978e509b3480bebb13bdffe429d1ea 245 SMART SM00481 4 78 1.4E-15 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 YPO2037 ab978e509b3480bebb13bdffe429d1ea 245 Pfam PF02811 PHP domain 5 80 9.9E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 YPO0056 e6f77053ef1b4653bb800c7edd500469 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 313 2.9E-71 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YPO0056 e6f77053ef1b4653bb800c7edd500469 321 PANTHER PTHR30160 1 300 3.7E-169 T 22-04-2016 YPO0056 e6f77053ef1b4653bb800c7edd500469 321 SUPERFAMILY SSF53756 1 320 2.51E-74 T 22-04-2016 YPO0056 e6f77053ef1b4653bb800c7edd500469 321 PANTHER PTHR30160:SF8 1 300 3.7E-169 T 22-04-2016 YPO0056 e6f77053ef1b4653bb800c7edd500469 321 Gene3D G3DSA:3.40.50.2000 1 158 1.7E-28 T 22-04-2016 YPO0056 e6f77053ef1b4653bb800c7edd500469 321 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 319 2.1E-125 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 YPO0056 e6f77053ef1b4653bb800c7edd500469 321 Gene3D G3DSA:3.40.50.2000 165 320 3.3E-37 T 22-04-2016 YPO3569 c657bb0a3af6952bcdc5da8b910bd65b 420 Gene3D G3DSA:3.65.10.10 221 417 2.6E-63 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPO3569 c657bb0a3af6952bcdc5da8b910bd65b 420 Gene3D G3DSA:3.65.10.10 21 220 2.7E-71 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPO3569 c657bb0a3af6952bcdc5da8b910bd65b 420 SUPERFAMILY SSF55205 1 419 2.62E-147 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YPO3569 c657bb0a3af6952bcdc5da8b910bd65b 420 PANTHER PTHR21090 1 420 3.7E-229 T 22-04-2016 YPO3569 c657bb0a3af6952bcdc5da8b910bd65b 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 47.015 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO3569 c657bb0a3af6952bcdc5da8b910bd65b 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 407 6.2E-127 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YPO3569 c657bb0a3af6952bcdc5da8b910bd65b 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.4E-186 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YPO4085 916c25258aaaaf89ccfadd591a81b5e2 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 5.5E-21 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain YPO4085 916c25258aaaaf89ccfadd591a81b5e2 137 Gene3D G3DSA:2.60.40.790 5 137 1.5E-14 T 22-04-2016 IPR008978 HSP20-like chaperone YPO4085 916c25258aaaaf89ccfadd591a81b5e2 137 SUPERFAMILY SSF49764 30 137 9.77E-20 T 22-04-2016 IPR008978 HSP20-like chaperone YPO4085 916c25258aaaaf89ccfadd591a81b5e2 137 PANTHER PTHR11527 5 137 7.5E-44 T 22-04-2016 IPR031107 Small heat shock protein HSP20 YPO4085 916c25258aaaaf89ccfadd591a81b5e2 137 PANTHER PTHR11527:SF122 5 137 7.5E-44 T 22-04-2016 YPO4085 916c25258aaaaf89ccfadd591a81b5e2 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 43.693 T 22-04-2016 IPR023728 Small heat shock protein IbpA YPO2660 ef4255cad974778d3c48b4505e6b0d52 525 SUPERFAMILY SSF53850 29 505 1.94E-96 T 22-04-2016 YPO2660 ef4255cad974778d3c48b4505e6b0d52 525 PIRSF PIRSF002741 30 517 1.5E-74 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPO2660 ef4255cad974778d3c48b4505e6b0d52 525 Gene3D G3DSA:3.90.76.10 54 172 6.7E-28 T 22-04-2016 YPO2660 ef4255cad974778d3c48b4505e6b0d52 525 PANTHER PTHR30290 12 525 2.9E-246 T 22-04-2016 YPO2660 ef4255cad974778d3c48b4505e6b0d52 525 PANTHER PTHR30290:SF27 12 525 2.9E-246 T 22-04-2016 YPO2660 ef4255cad974778d3c48b4505e6b0d52 525 Gene3D G3DSA:3.40.190.10 173 287 1.5E-25 T 22-04-2016 YPO2660 ef4255cad974778d3c48b4505e6b0d52 525 Gene3D G3DSA:3.10.105.10 288 467 1.9E-39 T 22-04-2016 YPO2660 ef4255cad974778d3c48b4505e6b0d52 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 427 7.3E-81 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPO1748 3a84e2e879d36a645b53e143fca1da67 279 SUPERFAMILY SSF53335 4 242 3.29E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1748 3a84e2e879d36a645b53e143fca1da67 279 Pfam PF13847 Methyltransferase domain 86 199 4.9E-11 T 22-04-2016 IPR025714 Methyltransferase domain YPO1748 3a84e2e879d36a645b53e143fca1da67 279 PIRSF PIRSF018249 1 271 3.8E-84 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 YPO1748 3a84e2e879d36a645b53e143fca1da67 279 PANTHER PTHR10108:SF886 17 270 4.8E-42 T 22-04-2016 YPO1748 3a84e2e879d36a645b53e143fca1da67 279 PANTHER PTHR10108 17 270 4.8E-42 T 22-04-2016 YPO1748 3a84e2e879d36a645b53e143fca1da67 279 Gene3D G3DSA:3.40.50.150 64 217 2.0E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0576 9c2780183672ef386964a125930fc5a2 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 3.1E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO0576 9c2780183672ef386964a125930fc5a2 264 PANTHER PTHR11751:SF421 1 111 4.1E-60 T 22-04-2016 YPO0576 9c2780183672ef386964a125930fc5a2 264 PANTHER PTHR11751 1 111 4.1E-60 T 22-04-2016 YPO0576 9c2780183672ef386964a125930fc5a2 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.4E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO0576 9c2780183672ef386964a125930fc5a2 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.4E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO0576 9c2780183672ef386964a125930fc5a2 264 Pfam PF07729 FCD domain 95 218 6.8E-17 T 22-04-2016 IPR011711 GntR, C-terminal YPO0576 9c2780183672ef386964a125930fc5a2 264 SMART SM00895 95 219 2.1E-14 T 22-04-2016 IPR011711 GntR, C-terminal YPO0576 9c2780183672ef386964a125930fc5a2 264 SUPERFAMILY SSF48008 93 226 1.05E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO0576 9c2780183672ef386964a125930fc5a2 264 Gene3D G3DSA:1.10.10.10 3 79 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0576 9c2780183672ef386964a125930fc5a2 264 SUPERFAMILY SSF46785 2 76 3.32E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0576 9c2780183672ef386964a125930fc5a2 264 Gene3D G3DSA:1.20.120.530 95 227 4.7E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO0576 9c2780183672ef386964a125930fc5a2 264 SMART SM00345 13 72 1.1E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YPO3916 b00f288991552a5971333049b6c74594 243 PRINTS PR00160 Glutaredoxin signature 214 227 3.8E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPO3916 b00f288991552a5971333049b6c74594 243 PRINTS PR00160 Glutaredoxin signature 228 241 3.8E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPO3916 b00f288991552a5971333049b6c74594 243 PRINTS PR00160 Glutaredoxin signature 173 191 3.8E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup YPO3916 b00f288991552a5971333049b6c74594 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 YPO3916 b00f288991552a5971333049b6c74594 243 Gene3D G3DSA:3.40.30.10 2 163 3.1E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3916 b00f288991552a5971333049b6c74594 243 SUPERFAMILY SSF52833 2 242 2.17E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3916 b00f288991552a5971333049b6c74594 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 9.5E-40 T 22-04-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 YPO3916 b00f288991552a5971333049b6c74594 243 PANTHER PTHR10430:SF19 1 168 6.6E-111 T 22-04-2016 YPO3916 b00f288991552a5971333049b6c74594 243 PANTHER PTHR10430 1 168 6.6E-111 T 22-04-2016 YPO3916 b00f288991552a5971333049b6c74594 243 Gene3D G3DSA:3.40.30.10 169 241 5.7E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3916 b00f288991552a5971333049b6c74594 243 Pfam PF00462 Glutaredoxin 173 231 1.1E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YPO3916 b00f288991552a5971333049b6c74594 243 Pfam PF08534 Redoxin 5 160 6.3E-33 T 22-04-2016 IPR013740 Redoxin GO:0016491 YPO0228 59daddab34c70f927432b384a57d2e31 144 SUPERFAMILY SSF52080 4 143 7.72E-47 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P YPO0228 59daddab34c70f927432b384a57d2e31 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 9.0E-52 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPO0228 59daddab34c70f927432b384a57d2e31 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.307 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 YPO0228 59daddab34c70f927432b384a57d2e31 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.7E-31 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P YPO0228 59daddab34c70f927432b384a57d2e31 144 PANTHER PTHR12934 1 144 4.6E-77 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 YPO0228 59daddab34c70f927432b384a57d2e31 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0228 59daddab34c70f927432b384a57d2e31 144 Gene3D G3DSA:3.100.10.10 32 143 9.9E-26 T 22-04-2016 YPO2411 3f3a61ff3f715a199264822f7b2e7120 348 PANTHER PTHR21225:SF6 1 348 3.7E-281 T 22-04-2016 YPO2411 3f3a61ff3f715a199264822f7b2e7120 348 SUPERFAMILY SSF51569 7 347 3.57E-131 T 22-04-2016 YPO2411 3f3a61ff3f715a199264822f7b2e7120 348 PANTHER PTHR21225 1 348 3.7E-281 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO2411 3f3a61ff3f715a199264822f7b2e7120 348 Pfam PF00793 DAHP synthetase I family 41 337 2.1E-101 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPO2411 3f3a61ff3f715a199264822f7b2e7120 348 PIRSF PIRSF001361 1 348 3.5E-155 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO2411 3f3a61ff3f715a199264822f7b2e7120 348 Gene3D G3DSA:3.20.20.70 8 347 2.1E-144 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2411 3f3a61ff3f715a199264822f7b2e7120 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 2.1E-168 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO0162 9e9d7a0391421067e1ca9fb395d5fcfd 436 Gene3D G3DSA:2.30.40.10 31 73 2.4E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO0162 9e9d7a0391421067e1ca9fb395d5fcfd 436 Gene3D G3DSA:3.20.20.140 74 376 4.8E-124 T 22-04-2016 YPO0162 9e9d7a0391421067e1ca9fb395d5fcfd 436 Pfam PF07969 Amidohydrolase family 55 414 2.0E-53 T 22-04-2016 IPR013108 Amidohydrolase 3 YPO0162 9e9d7a0391421067e1ca9fb395d5fcfd 436 PANTHER PTHR32027 1 436 2.7E-187 T 22-04-2016 YPO0162 9e9d7a0391421067e1ca9fb395d5fcfd 436 PANTHER PTHR32027:SF0 1 436 2.7E-187 T 22-04-2016 YPO0162 9e9d7a0391421067e1ca9fb395d5fcfd 436 SUPERFAMILY SSF51556 66 385 2.92E-106 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO0162 9e9d7a0391421067e1ca9fb395d5fcfd 436 SUPERFAMILY SSF51338 15 71 3.21E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO3167 d6def7e7622e1b6429d225298cf11e17 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 6.3E-19 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 YPO3167 d6def7e7622e1b6429d225298cf11e17 110 PANTHER PTHR36835 1 110 8.5E-43 T 22-04-2016 YPO3167 d6def7e7622e1b6429d225298cf11e17 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 1.0E-39 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 Gene3D G3DSA:1.20.1250.20 14 195 1.4E-26 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 Gene3D G3DSA:1.20.1250.20 264 449 2.4E-18 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 5.2E-10 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 5.2E-10 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 268 293 5.2E-10 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 5.2E-10 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 5.2E-10 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 5.2E-10 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PANTHER PTHR23501:SF5 6 454 5.6E-167 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 PANTHER PTHR23501 6 454 5.6E-167 T 22-04-2016 YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 SUPERFAMILY SSF103473 251 450 1.31E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 SUPERFAMILY SSF103473 8 195 1.31E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1712 fd59c7fb6883fa0cac2989a94dcfe0dc 455 Pfam PF07690 Major Facilitator Superfamily 21 412 1.5E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 Pfam PF00085 Thioredoxin 7 107 4.8E-18 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 Pfam PF14561 Tetratricopeptide repeat 200 289 3.2E-30 T 22-04-2016 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 Gene3D G3DSA:3.40.30.10 6 109 2.0E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 SUPERFAMILY SSF52833 4 113 5.69E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 SUPERFAMILY SSF48452 120 242 1.23E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 Gene3D G3DSA:1.25.40.10 110 201 3.8E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 PANTHER PTHR10438 7 112 5.6E-61 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 PANTHER PTHR10438 226 247 5.6E-61 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 Gene3D G3DSA:1.25.40.10 202 289 1.4E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 Pfam PF14559 Tetratricopeptide repeat 124 195 2.1E-18 T 22-04-2016 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 PANTHER PTHR10438:SF288 7 112 5.6E-61 T 22-04-2016 YPO3082 8f0d4507047df8a8f69a79c5df35551f 289 PANTHER PTHR10438:SF288 226 247 5.6E-61 T 22-04-2016 YPO2705 0121345a6eb833a5931dce08dfec334f 127 PANTHER PTHR30191:SF5 1 127 2.9E-103 T 22-04-2016 YPO2705 0121345a6eb833a5931dce08dfec334f 127 Gene3D G3DSA:3.20.70.20 27 126 7.0E-37 T 22-04-2016 YPO2705 0121345a6eb833a5931dce08dfec334f 127 SUPERFAMILY SSF51998 27 125 1.33E-24 T 22-04-2016 YPO2705 0121345a6eb833a5931dce08dfec334f 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.1E-71 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA YPO2705 0121345a6eb833a5931dce08dfec334f 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPO2705 0121345a6eb833a5931dce08dfec334f 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 41.885 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA YPO2705 0121345a6eb833a5931dce08dfec334f 127 Pfam PF01228 Glycine radical 14 108 1.0E-22 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 YPO2705 0121345a6eb833a5931dce08dfec334f 127 PANTHER PTHR30191 1 127 2.9E-103 T 22-04-2016 YPO2705 0121345a6eb833a5931dce08dfec334f 127 PIRSF PIRSF000378 2 127 1.2E-54 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA YPO3967 52a4711a6412074e7d1deda976bd2b2a 498 Pfam PF01384 Phosphate transporter family 30 487 2.8E-87 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 YPO3967 52a4711a6412074e7d1deda976bd2b2a 498 PANTHER PTHR11101:SF59 2 498 0.0 T 22-04-2016 YPO3967 52a4711a6412074e7d1deda976bd2b2a 498 PANTHER PTHR11101 2 498 0.0 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 Gene3D G3DSA:2.30.330.10 53 137 1.3E-38 T 22-04-2016 YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 50 1.2E-23 T 22-04-2016 IPR031576 Flagellar motor switch protein FliN, N-terminal YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 PANTHER PTHR22617 1 136 2.1E-43 T 22-04-2016 YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 57 73 3.7E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 90 3.7E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 118 3.7E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 103 3.7E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 57 127 8.9E-26 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 129 2.7E-33 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO1822 1647020aaf1d0ca65b78922adaf55f9e 138 SUPERFAMILY SSF101801 55 136 1.83E-26 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO0461 e8d560236b72b2267721d41b30debcc8 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 370 2.2E-24 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO0461 e8d560236b72b2267721d41b30debcc8 429 PANTHER PTHR10314 53 427 1.3E-146 T 22-04-2016 YPO0461 e8d560236b72b2267721d41b30debcc8 429 PANTHER PTHR10314 25 36 1.3E-146 T 22-04-2016 YPO0461 e8d560236b72b2267721d41b30debcc8 429 Gene3D G3DSA:3.40.50.1100 106 195 2.4E-12 T 22-04-2016 YPO0461 e8d560236b72b2267721d41b30debcc8 429 Pfam PF14821 Threonine synthase N terminus 8 80 5.0E-11 T 22-04-2016 IPR029144 Threonine synthase, N-terminal YPO0461 e8d560236b72b2267721d41b30debcc8 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YPO0461 e8d560236b72b2267721d41b30debcc8 429 SUPERFAMILY SSF53686 1 426 1.83E-132 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO0461 e8d560236b72b2267721d41b30debcc8 429 Gene3D G3DSA:3.90.1380.10 1 84 8.4E-20 T 22-04-2016 IPR029144 Threonine synthase, N-terminal YPO0461 e8d560236b72b2267721d41b30debcc8 429 TIGRFAM TIGR00260 thrC: threonine synthase 53 397 3.7E-121 T 22-04-2016 IPR004450 Threonine synthase-like YPO0461 e8d560236b72b2267721d41b30debcc8 429 Gene3D G3DSA:3.40.50.1100 321 401 4.6E-15 T 22-04-2016 YPO0461 e8d560236b72b2267721d41b30debcc8 429 Gene3D G3DSA:3.40.50.1100 196 319 3.1E-52 T 22-04-2016 YPO0461 e8d560236b72b2267721d41b30debcc8 429 PANTHER PTHR10314:SF1 53 427 1.3E-146 T 22-04-2016 YPO0461 e8d560236b72b2267721d41b30debcc8 429 PANTHER PTHR10314:SF1 25 36 1.3E-146 T 22-04-2016 YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 SMART SM00862 156 232 2.1E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 Gene3D G3DSA:3.40.50.2300 2 124 2.5E-35 T 22-04-2016 YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 Gene3D G3DSA:1.10.10.10 136 233 1.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 SUPERFAMILY SSF46894 137 234 3.12E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 PANTHER PTHR26402:SF586 4 238 7.8E-156 T 22-04-2016 YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 SUPERFAMILY SSF52172 2 127 8.4E-36 T 22-04-2016 IPR011006 CheY-like superfamily YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 7.0E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 PANTHER PTHR26402 4 238 7.8E-156 T 22-04-2016 YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 Pfam PF00072 Response regulator receiver domain 6 113 6.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0458 d396cd85d815ba09f49e0b91eed6ec93 238 SMART SM00448 4 114 4.5E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0316 3276faaca33f809025ba333c788c6f42 345 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 21 335 3.0E-162 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 YPO0316 3276faaca33f809025ba333c788c6f42 345 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO0316 3276faaca33f809025ba333c788c6f42 345 PIRSF PIRSF006621 10 332 9.1E-72 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO0316 3276faaca33f809025ba333c788c6f42 345 PANTHER PTHR11082:SF29 13 343 2.4E-164 T 22-04-2016 YPO0316 3276faaca33f809025ba333c788c6f42 345 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 12 337 52.896 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 YPO0316 3276faaca33f809025ba333c788c6f42 345 PANTHER PTHR11082 13 343 2.4E-164 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO0316 3276faaca33f809025ba333c788c6f42 345 SUPERFAMILY SSF51395 21 333 8.55E-72 T 22-04-2016 YPO0316 3276faaca33f809025ba333c788c6f42 345 Gene3D G3DSA:3.20.20.70 21 261 2.1E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0316 3276faaca33f809025ba333c788c6f42 345 Pfam PF01207 Dihydrouridine synthase (Dus) 24 323 1.3E-95 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YPO1532 6acaca067da218bd82e5bf9fdda68ccb 614 PANTHER PTHR34384:SF5 16 613 0.0 T 22-04-2016 YPO1532 6acaca067da218bd82e5bf9fdda68ccb 614 Pfam PF04183 IucA / IucC family 159 408 6.6E-77 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 YPO1532 6acaca067da218bd82e5bf9fdda68ccb 614 PANTHER PTHR34384 16 613 0.0 T 22-04-2016 YPO1532 6acaca067da218bd82e5bf9fdda68ccb 614 Pfam PF06276 Ferric iron reductase FhuF-like transporter 429 586 5.0E-41 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YPO2459 f6167df548c648db4610eaaed207de1e 452 PANTHER PTHR23511:SF10 1 435 0.0 T 22-04-2016 YPO2459 f6167df548c648db4610eaaed207de1e 452 Gene3D G3DSA:1.20.1250.20 25 204 7.8E-24 T 22-04-2016 YPO2459 f6167df548c648db4610eaaed207de1e 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YPO2459 f6167df548c648db4610eaaed207de1e 452 PANTHER PTHR23511 1 435 0.0 T 22-04-2016 YPO2459 f6167df548c648db4610eaaed207de1e 452 SUPERFAMILY SSF103473 12 433 9.68E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2459 f6167df548c648db4610eaaed207de1e 452 Gene3D G3DSA:1.20.1250.20 250 429 2.0E-12 T 22-04-2016 YPO2459 f6167df548c648db4610eaaed207de1e 452 Pfam PF00083 Sugar (and other) transporter 57 435 8.3E-56 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 YPO0593 a6298fefed244a782a307874b47ed061 577 SUPERFAMILY SSF81606 323 575 2.88E-10 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 YPO0593 a6298fefed244a782a307874b47ed061 577 Gene3D G3DSA:3.60.40.10 309 575 6.1E-7 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 YPO0593 a6298fefed244a782a307874b47ed061 577 Pfam PF13672 Protein phosphatase 2C 316 561 2.3E-56 T 22-04-2016 YPO2342 aa2056c8688d31370fc0f2575a559f06 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 YPO2342 aa2056c8688d31370fc0f2575a559f06 167 PANTHER PTHR10681 1 167 1.5E-54 T 22-04-2016 YPO2342 aa2056c8688d31370fc0f2575a559f06 167 Pfam PF08534 Redoxin 21 163 2.8E-29 T 22-04-2016 IPR013740 Redoxin GO:0016491 YPO2342 aa2056c8688d31370fc0f2575a559f06 167 SUPERFAMILY SSF52833 4 164 1.86E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2342 aa2056c8688d31370fc0f2575a559f06 167 PANTHER PTHR10681:SF81 1 167 1.5E-54 T 22-04-2016 YPO2342 aa2056c8688d31370fc0f2575a559f06 167 Gene3D G3DSA:3.40.30.10 4 167 1.6E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO2342 aa2056c8688d31370fc0f2575a559f06 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 40.468 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 YPO2404 1b39e1144afcc9376494172dea65d14a 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 4.4E-34 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 YPO2404 1b39e1144afcc9376494172dea65d14a 123 PANTHER PTHR10072:SF47 1 123 1.8E-82 T 22-04-2016 YPO2404 1b39e1144afcc9376494172dea65d14a 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site YPO2404 1b39e1144afcc9376494172dea65d14a 123 Gene3D G3DSA:2.60.300.12 19 112 4.6E-30 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO2404 1b39e1144afcc9376494172dea65d14a 123 SUPERFAMILY SSF89360 19 112 1.37E-27 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO2404 1b39e1144afcc9376494172dea65d14a 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 9.6E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis YPO2404 1b39e1144afcc9376494172dea65d14a 123 PANTHER PTHR10072 1 123 1.8E-82 T 22-04-2016 YPO0185 24a971eaa5c8051a4efb17decbda0859 282 Gene3D G3DSA:3.60.130.10 4 282 2.1E-95 T 22-04-2016 YPO0185 24a971eaa5c8051a4efb17decbda0859 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 8.4E-65 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 YPO0185 24a971eaa5c8051a4efb17decbda0859 282 PANTHER PTHR30468:SF2 1 282 8.8E-102 T 22-04-2016 YPO0185 24a971eaa5c8051a4efb17decbda0859 282 PANTHER PTHR30468 1 282 8.8E-102 T 22-04-2016 YPO0185 24a971eaa5c8051a4efb17decbda0859 282 SUPERFAMILY SSF51197 7 281 4.03E-94 T 22-04-2016 YPO3776 334e296de62edfe70a44389c9bd4d06a 258 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 3.4E-77 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPO3776 334e296de62edfe70a44389c9bd4d06a 258 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 9.8E-64 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPO3776 334e296de62edfe70a44389c9bd4d06a 258 ProSitePatterns PS01218 TatC family signature. 154 173 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site YPO3776 334e296de62edfe70a44389c9bd4d06a 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 8.1E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPO3776 334e296de62edfe70a44389c9bd4d06a 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 8.1E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPO3776 334e296de62edfe70a44389c9bd4d06a 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 8.1E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPO3776 334e296de62edfe70a44389c9bd4d06a 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 8.1E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPO3776 334e296de62edfe70a44389c9bd4d06a 258 PANTHER PTHR30371:SF0 4 258 2.0E-116 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPO3776 334e296de62edfe70a44389c9bd4d06a 258 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 242 18.0 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YPO3776 334e296de62edfe70a44389c9bd4d06a 258 PANTHER PTHR30371 4 258 2.0E-116 T 22-04-2016 YPO2137 19874cec2b421cda76b315b8f201b09d 390 PANTHER PTHR23531:SF1 1 390 1.9E-151 T 22-04-2016 YPO2137 19874cec2b421cda76b315b8f201b09d 390 Gene3D G3DSA:1.20.1250.20 216 385 1.2E-10 T 22-04-2016 YPO2137 19874cec2b421cda76b315b8f201b09d 390 Pfam PF07690 Major Facilitator Superfamily 10 287 1.3E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO2137 19874cec2b421cda76b315b8f201b09d 390 Gene3D G3DSA:1.20.1250.20 7 187 2.4E-10 T 22-04-2016 YPO2137 19874cec2b421cda76b315b8f201b09d 390 PANTHER PTHR23531 1 390 1.9E-151 T 22-04-2016 YPO2137 19874cec2b421cda76b315b8f201b09d 390 SUPERFAMILY SSF103473 7 388 1.22E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3985 d6f31f6d28f9e4b28af2c85c66eae111 360 PANTHER PTHR30213 21 360 5.3E-105 T 22-04-2016 YPO3985 d6f31f6d28f9e4b28af2c85c66eae111 360 Pfam PF03631 Virulence factor BrkB 63 320 4.5E-45 T 22-04-2016 IPR017039 Virulence factor BrkB YPO3985 d6f31f6d28f9e4b28af2c85c66eae111 360 PANTHER PTHR30213:SF1 21 360 5.3E-105 T 22-04-2016 YPO3985 d6f31f6d28f9e4b28af2c85c66eae111 360 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 49 321 9.8E-121 T 22-04-2016 IPR005274 Inner membrane protein YhjD YPO1595 7f3eaee928b008b8c80fd81346c2a94d 55 SUPERFAMILY SSF57829 2 54 1.04E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 YPO1595 7f3eaee928b008b8c80fd81346c2a94d 55 Pfam PF01783 Ribosomal L32p protein family 2 54 1.1E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 YPO1595 7f3eaee928b008b8c80fd81346c2a94d 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.225 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 YPO1595 7f3eaee928b008b8c80fd81346c2a94d 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.5E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 Gene3D G3DSA:1.10.10.10 1 84 1.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 PANTHER PTHR30346:SF6 1 287 1.6E-127 T 22-04-2016 YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 Pfam PF03466 LysR substrate binding domain 89 287 1.5E-42 T 22-04-2016 IPR005119 LysR, substrate-binding YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 SUPERFAMILY SSF46785 1 83 1.58E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 PANTHER PTHR30346 1 287 1.6E-127 T 22-04-2016 YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.0E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 Gene3D G3DSA:3.40.190.10 88 176 6.0E-25 T 22-04-2016 YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 SUPERFAMILY SSF53850 91 287 2.05E-36 T 22-04-2016 YPO1929 a4f04c2fb68890ecba18c008fb6733a8 292 Gene3D G3DSA:3.40.190.10 177 267 1.1E-31 T 22-04-2016 YPO3969 6782cefae553d7a763269f61ac7cc2cd 111 Pfam PF10625 Universal stress protein B (UspB) 1 106 2.3E-54 T 22-04-2016 IPR019598 Universal stress protein B YPO3969 6782cefae553d7a763269f61ac7cc2cd 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 37.029 T 22-04-2016 IPR019598 Universal stress protein B YPO1874 4173527e61bc1254a6912816ed03463f 148 Gene3D G3DSA:1.10.10.10 45 93 3.0E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1874 4173527e61bc1254a6912816ed03463f 148 SUPERFAMILY SSF46689 8 53 5.02E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1874 4173527e61bc1254a6912816ed03463f 148 Pfam PF01527 Transposase 48 117 2.5E-8 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YPO1874 4173527e61bc1254a6912816ed03463f 148 Pfam PF01527 Transposase 10 42 2.2E-5 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YPO1874 4173527e61bc1254a6912816ed03463f 148 Gene3D G3DSA:1.10.10.60 99 123 3.2E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO1874 4173527e61bc1254a6912816ed03463f 148 Gene3D G3DSA:1.10.10.60 10 41 3.2E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3145 91f114eb51bb42054e57f77fa3c32816 588 SUPERFAMILY SSF52540 324 572 7.17E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3145 91f114eb51bb42054e57f77fa3c32816 588 Gene3D G3DSA:1.20.1560.10 7 319 2.2E-71 T 22-04-2016 YPO3145 91f114eb51bb42054e57f77fa3c32816 588 SMART SM00382 361 547 2.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3145 91f114eb51bb42054e57f77fa3c32816 588 Gene3D G3DSA:3.40.50.300 341 565 8.2E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3145 91f114eb51bb42054e57f77fa3c32816 588 PANTHER PTHR24221 2 580 3.6E-192 T 22-04-2016 YPO3145 91f114eb51bb42054e57f77fa3c32816 588 Pfam PF00005 ABC transporter 352 500 1.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3145 91f114eb51bb42054e57f77fa3c32816 588 SUPERFAMILY SSF90123 7 319 2.75E-72 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO3145 91f114eb51bb42054e57f77fa3c32816 588 Pfam PF00664 ABC transporter transmembrane region 21 291 1.3E-39 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO3145 91f114eb51bb42054e57f77fa3c32816 588 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0730 f71e26077657364f4df2a842337e8d4e 370 Pfam PF02119 Flagellar P-ring protein 30 369 1.8E-130 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PANTHER PTHR30381:SF1 1 370 1.9E-228 T 22-04-2016 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PRINTS PR01010 Flagellar P-ring protein signature 126 144 1.3E-71 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PRINTS PR01010 Flagellar P-ring protein signature 61 76 1.3E-71 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PRINTS PR01010 Flagellar P-ring protein signature 27 42 1.3E-71 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PRINTS PR01010 Flagellar P-ring protein signature 109 126 1.3E-71 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PRINTS PR01010 Flagellar P-ring protein signature 257 269 1.3E-71 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PRINTS PR01010 Flagellar P-ring protein signature 87 106 1.3E-71 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PRINTS PR01010 Flagellar P-ring protein signature 167 185 1.3E-71 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PRINTS PR01010 Flagellar P-ring protein signature 42 57 1.3E-71 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PRINTS PR01010 Flagellar P-ring protein signature 193 211 1.3E-71 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 Hamap MF_00416 Flagellar P-ring protein [flgI]. 11 370 35.724 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YPO0730 f71e26077657364f4df2a842337e8d4e 370 PANTHER PTHR30381 1 370 1.9E-228 T 22-04-2016 YPO3877 6976622be8ba9e18b7411adcfe80511a 176 Gene3D G3DSA:2.60.40.1090 25 175 1.7E-22 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO3877 6976622be8ba9e18b7411adcfe80511a 176 PANTHER PTHR33420:SF10 1 176 6.8E-55 T 22-04-2016 YPO3877 6976622be8ba9e18b7411adcfe80511a 176 PANTHER PTHR33420 1 176 6.8E-55 T 22-04-2016 YPO3877 6976622be8ba9e18b7411adcfe80511a 176 SUPERFAMILY SSF49401 25 175 1.29E-21 T 22-04-2016 IPR008966 Adhesion domain YPO3877 6976622be8ba9e18b7411adcfe80511a 176 Pfam PF16970 Type-1 fimbrial protein, A 52 175 2.2E-12 T 22-04-2016 YPO1726 9a7eef4516833dcf0df9ea0ca2761877 108 Pfam PF07883 Cupin domain 35 92 1.4E-9 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YPO1726 9a7eef4516833dcf0df9ea0ca2761877 108 PANTHER PTHR40112 1 108 7.9E-14 T 22-04-2016 YPO1726 9a7eef4516833dcf0df9ea0ca2761877 108 SUPERFAMILY SSF51182 6 104 7.18E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO1726 9a7eef4516833dcf0df9ea0ca2761877 108 Gene3D G3DSA:2.60.120.10 2 107 4.6E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO1726 9a7eef4516833dcf0df9ea0ca2761877 108 PANTHER PTHR40112:SF1 1 108 7.9E-14 T 22-04-2016 YPO1726 9a7eef4516833dcf0df9ea0ca2761877 108 PIRSF PIRSF029883 3 108 3.9E-28 T 22-04-2016 IPR025499 Pectin degradation protein KdgF UniPathway: UPA00545 YPO0623 442894de4ecf0722638827a5ba1ae12e 410 Pfam PF00155 Aminotransferase class I and II 55 394 2.6E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO0623 442894de4ecf0722638827a5ba1ae12e 410 PANTHER PTHR11751 19 396 4.8E-95 T 22-04-2016 YPO0623 442894de4ecf0722638827a5ba1ae12e 410 Gene3D G3DSA:3.90.1150.10 255 397 9.0E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO0623 442894de4ecf0722638827a5ba1ae12e 410 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 YPO0623 442894de4ecf0722638827a5ba1ae12e 410 Gene3D G3DSA:3.40.640.10 56 254 4.4E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0623 442894de4ecf0722638827a5ba1ae12e 410 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 240 264 9.6E-11 T 22-04-2016 YPO0623 442894de4ecf0722638827a5ba1ae12e 410 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 174 198 9.6E-11 T 22-04-2016 YPO0623 442894de4ecf0722638827a5ba1ae12e 410 SUPERFAMILY SSF53383 50 398 7.89E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO2712 3657c881c3d566865634af056ee069ac 218 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 188 2.2E-22 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal YPO2712 3657c881c3d566865634af056ee069ac 218 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 86 6.6E-35 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 YPO2712 3657c881c3d566865634af056ee069ac 218 PIRSF PIRSF016938 1 206 2.3E-31 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 YPO2712 3657c881c3d566865634af056ee069ac 218 SUPERFAMILY SSF89069 1 66 7.19E-20 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 YPO2712 3657c881c3d566865634af056ee069ac 218 PANTHER PTHR38104 1 218 4.0E-84 T 22-04-2016 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SMART SM00411 3 92 2.2E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Gene3D G3DSA:4.10.520.10 2 93 6.4E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.7E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PANTHER PTHR33175:SF2 2 98 4.8E-56 T 22-04-2016 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 1.4E-53 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SUPERFAMILY SSF47729 3 92 2.21E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PANTHER PTHR33175 2 98 4.8E-56 T 22-04-2016 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.05E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.05E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.05E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO2427 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.046 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 YPO3350 94d68a65f64c07505b6ecbfaad8df7fe 333 PANTHER PTHR28629 1 329 1.8E-150 T 22-04-2016 YPO3350 94d68a65f64c07505b6ecbfaad8df7fe 333 Gene3D G3DSA:3.30.1180.20 185 329 2.5E-53 T 22-04-2016 YPO3350 94d68a65f64c07505b6ecbfaad8df7fe 333 PANTHER PTHR28629:SF2 1 329 1.8E-150 T 22-04-2016 YPO3350 94d68a65f64c07505b6ecbfaad8df7fe 333 Gene3D G3DSA:3.40.50.10440 11 183 4.1E-59 T 22-04-2016 YPO3350 94d68a65f64c07505b6ecbfaad8df7fe 333 SUPERFAMILY SSF82549 11 329 5.75E-112 T 22-04-2016 YPO3350 94d68a65f64c07505b6ecbfaad8df7fe 333 Pfam PF02733 Dak1 domain 18 325 2.0E-111 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 YPO1922 361aa33f5a7f20b293dec83b6f1327ea 176 Pfam PF00419 Fimbrial protein 26 175 1.8E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO1922 361aa33f5a7f20b293dec83b6f1327ea 176 SUPERFAMILY SSF49401 25 175 5.97E-26 T 22-04-2016 IPR008966 Adhesion domain YPO1922 361aa33f5a7f20b293dec83b6f1327ea 176 PANTHER PTHR33420:SF10 1 176 3.2E-57 T 22-04-2016 YPO1922 361aa33f5a7f20b293dec83b6f1327ea 176 Gene3D G3DSA:2.60.40.1090 25 176 8.2E-25 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO1922 361aa33f5a7f20b293dec83b6f1327ea 176 PANTHER PTHR33420 1 176 3.2E-57 T 22-04-2016 YPO1711 203ee455215c895b441108876f4efd81 267 Gene3D G3DSA:2.60.40.1070 172 261 2.3E-11 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1711 203ee455215c895b441108876f4efd81 267 PANTHER PTHR30251 10 267 4.1E-111 T 22-04-2016 YPO1711 203ee455215c895b441108876f4efd81 267 PANTHER PTHR30251:SF2 10 267 4.1E-111 T 22-04-2016 YPO1711 203ee455215c895b441108876f4efd81 267 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 120 137 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPO1711 203ee455215c895b441108876f4efd81 267 SUPERFAMILY SSF49354 34 166 3.14E-36 T 22-04-2016 IPR008962 PapD-like YPO1711 203ee455215c895b441108876f4efd81 267 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 39 166 1.2E-38 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO1711 203ee455215c895b441108876f4efd81 267 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 192 258 1.4E-11 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1711 203ee455215c895b441108876f4efd81 267 Gene3D G3DSA:2.60.40.360 39 166 4.1E-39 T 22-04-2016 IPR008962 PapD-like YPO1711 203ee455215c895b441108876f4efd81 267 PRINTS PR00969 Pili chaperone signature 121 138 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1711 203ee455215c895b441108876f4efd81 267 PRINTS PR00969 Pili chaperone signature 148 163 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1711 203ee455215c895b441108876f4efd81 267 PRINTS PR00969 Pili chaperone signature 187 202 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1711 203ee455215c895b441108876f4efd81 267 PRINTS PR00969 Pili chaperone signature 91 112 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1711 203ee455215c895b441108876f4efd81 267 PRINTS PR00969 Pili chaperone signature 40 49 3.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1711 203ee455215c895b441108876f4efd81 267 SUPERFAMILY SSF49584 160 262 1.07E-11 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1844 8cb6b696444ffe532ff471843371f91a 169 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 168 1.6E-92 T 22-04-2016 IPR022523 Flagellar regulator, FliZ YPO1844 8cb6b696444ffe532ff471843371f91a 169 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 92 167 6.9E-7 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YPO1083 d1f0389a2af6ce259426ab7ef2314c91 494 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 27 462 2.8E-85 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 YPO1083 d1f0389a2af6ce259426ab7ef2314c91 494 PANTHER PTHR30618 1 494 0.0 T 22-04-2016 YPO1083 d1f0389a2af6ce259426ab7ef2314c91 494 PANTHER PTHR30618:SF6 1 494 0.0 T 22-04-2016 YPO0607 53fe45bc5467938a945350904db5f77a 331 Pfam PF13557 Putative MetA-pathway of phenol degradation 115 266 8.2E-6 T 22-04-2016 IPR025737 MetA-pathway of phenol degradation, putative YPO0153 2f4c431c0fd8b236eaa85397bbabe1eb 329 Gene3D G3DSA:3.30.70.1070 243 307 6.5E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO0153 2f4c431c0fd8b236eaa85397bbabe1eb 329 Hamap MF_02021 Cell division protein DamX [damX]. 1 329 25.583 T 22-04-2016 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 YPO0153 2f4c431c0fd8b236eaa85397bbabe1eb 329 SUPERFAMILY SSF110997 244 309 5.1E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO0153 2f4c431c0fd8b236eaa85397bbabe1eb 329 Pfam PF05036 Sporulation related domain 245 318 2.9E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO1403 178e753a18dad2312dfb19151d7fe966 440 Gene3D G3DSA:1.10.10.10 24 118 3.6E-49 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1403 178e753a18dad2312dfb19151d7fe966 440 PIRSF PIRSF018282 1 440 3.8E-247 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 YPO1403 178e753a18dad2312dfb19151d7fe966 440 Pfam PF17193 MukF C-terminal domain 283 440 1.2E-78 T 22-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain YPO1403 178e753a18dad2312dfb19151d7fe966 440 Pfam PF17192 MukF middle domain 121 281 5.0E-85 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain YPO1403 178e753a18dad2312dfb19151d7fe966 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.174 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 YPO1403 178e753a18dad2312dfb19151d7fe966 440 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 75 - T 22-04-2016 IPR010916 TonB box, conserved site YPO1403 178e753a18dad2312dfb19151d7fe966 440 Pfam PF03882 MukF winged-helix domain 3 117 3.2E-58 T 22-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain YPO1403 178e753a18dad2312dfb19151d7fe966 440 SUPERFAMILY SSF46785 8 118 5.17E-50 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1403 178e753a18dad2312dfb19151d7fe966 440 SUPERFAMILY SSF140570 119 281 1.96E-76 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain YPO1455 751e77b8d133561edc0edbc5d0444e6a 427 SUPERFAMILY SSF53901 230 425 9.42E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1455 751e77b8d133561edc0edbc5d0444e6a 427 PANTHER PTHR11712 80 425 1.5E-113 T 22-04-2016 YPO1455 751e77b8d133561edc0edbc5d0444e6a 427 PANTHER PTHR11712 1 61 1.5E-113 T 22-04-2016 YPO1455 751e77b8d133561edc0edbc5d0444e6a 427 SUPERFAMILY SSF53901 4 267 1.65E-39 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1455 751e77b8d133561edc0edbc5d0444e6a 427 SMART SM00825 Beta-ketoacyl synthase 6 427 1.4E-10 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1455 751e77b8d133561edc0edbc5d0444e6a 427 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 270 382 6.6E-30 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1455 751e77b8d133561edc0edbc5d0444e6a 427 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 261 9.1E-25 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1455 751e77b8d133561edc0edbc5d0444e6a 427 Gene3D G3DSA:3.40.47.10 279 425 3.6E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1455 751e77b8d133561edc0edbc5d0444e6a 427 Gene3D G3DSA:3.40.47.10 2 275 1.2E-38 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO1634 3911d4ce49cedc2ff64afdac296a1d97 223 Gene3D G3DSA:3.40.50.2300 1 133 4.4E-38 T 22-04-2016 YPO1634 3911d4ce49cedc2ff64afdac296a1d97 223 Gene3D G3DSA:1.10.10.10 134 222 3.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1634 3911d4ce49cedc2ff64afdac296a1d97 223 SUPERFAMILY SSF52172 1 175 1.34E-38 T 22-04-2016 IPR011006 CheY-like superfamily YPO1634 3911d4ce49cedc2ff64afdac296a1d97 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 1.5E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO1634 3911d4ce49cedc2ff64afdac296a1d97 223 PANTHER PTHR26402:SF537 1 223 2.1E-161 T 22-04-2016 YPO1634 3911d4ce49cedc2ff64afdac296a1d97 223 SMART SM00448 1 112 2.4E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1634 3911d4ce49cedc2ff64afdac296a1d97 223 Pfam PF00072 Response regulator receiver domain 3 112 3.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO1634 3911d4ce49cedc2ff64afdac296a1d97 223 PANTHER PTHR26402 1 223 2.1E-161 T 22-04-2016 YPO1634 3911d4ce49cedc2ff64afdac296a1d97 223 SMART SM00862 145 220 2.4E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO3880 b09ce7dd2970dd1d9f8636616b13281b 455 Gene3D G3DSA:2.60.40.1090 284 452 1.6E-9 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO3880 b09ce7dd2970dd1d9f8636616b13281b 455 Pfam PF00419 Fimbrial protein 277 455 1.5E-27 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO3880 b09ce7dd2970dd1d9f8636616b13281b 455 PIRSF PIRSF029766 30 455 7.1E-186 T 22-04-2016 IPR011228 Uncharacterised conserved protein UCP029766 YPO3880 b09ce7dd2970dd1d9f8636616b13281b 455 SUPERFAMILY SSF49401 285 453 5.97E-11 T 22-04-2016 IPR008966 Adhesion domain YPO1333 627ed0e0f8351fa72a33c708594d5289 321 PANTHER PTHR30193 11 321 3.4E-155 T 22-04-2016 YPO1333 627ed0e0f8351fa72a33c708594d5289 321 PANTHER PTHR30193:SF5 11 321 3.4E-155 T 22-04-2016 YPO1333 627ed0e0f8351fa72a33c708594d5289 321 Gene3D G3DSA:1.10.3720.10 31 310 4.0E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1333 627ed0e0f8351fa72a33c708594d5289 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 317 3.9E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1333 627ed0e0f8351fa72a33c708594d5289 321 SUPERFAMILY SSF161098 33 312 4.49E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2877 31ef0368f548049ae14cf45d4347fee5 211 Gene3D G3DSA:1.25.40.10 112 197 5.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2877 31ef0368f548049ae14cf45d4347fee5 211 Pfam PF09976 Tetratricopeptide repeat-like domain 15 210 1.5E-56 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain YPO2877 31ef0368f548049ae14cf45d4347fee5 211 Gene3D G3DSA:1.25.40.10 54 111 6.1E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2877 31ef0368f548049ae14cf45d4347fee5 211 SUPERFAMILY SSF48452 97 196 1.07E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2877 31ef0368f548049ae14cf45d4347fee5 211 PANTHER PTHR38035 2 211 1.4E-94 T 22-04-2016 YPO2877 31ef0368f548049ae14cf45d4347fee5 211 PIRSF PIRSF006170 1 211 4.1E-56 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 YPO1868 1cb253a3b6abce0601375fd9065d3e5a 171 SUPERFAMILY SSF56349 3 164 2.18E-27 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPO1868 1cb253a3b6abce0601375fd9065d3e5a 171 Gene3D G3DSA:1.10.443.10 50 167 3.1E-18 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO1868 1cb253a3b6abce0601375fd9065d3e5a 171 Gene3D G3DSA:1.10.150.130 3 44 4.2E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPO2585 3dd0f1b77d7cceb5874e5b2fc6a6950c 656 Pfam PF00294 pfkB family carbohydrate kinase 28 343 9.8E-43 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPO2585 3dd0f1b77d7cceb5874e5b2fc6a6950c 656 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 26 351 6.6E-125 T 22-04-2016 IPR030830 5-dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92|UniPathway: UPA00076 YPO2585 3dd0f1b77d7cceb5874e5b2fc6a6950c 656 PANTHER PTHR10584 10 375 1.2E-218 T 22-04-2016 YPO2585 3dd0f1b77d7cceb5874e5b2fc6a6950c 656 SUPERFAMILY SSF53613 25 350 3.74E-69 T 22-04-2016 IPR029056 Ribokinase-like YPO2585 3dd0f1b77d7cceb5874e5b2fc6a6950c 656 PANTHER PTHR10584:SF194 10 375 1.2E-218 T 22-04-2016 YPO2585 3dd0f1b77d7cceb5874e5b2fc6a6950c 656 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 295 308 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPO2585 3dd0f1b77d7cceb5874e5b2fc6a6950c 656 Gene3D G3DSA:3.40.1190.20 22 353 4.5E-83 T 22-04-2016 IPR029056 Ribokinase-like YPO2585 3dd0f1b77d7cceb5874e5b2fc6a6950c 656 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 346 653 4.9E-143 T 22-04-2016 IPR018659 Protein of unknown function DUF2090 YPO0483 2ec19fd937651ef7f80a0b26d18d8af9 204 PANTHER PTHR30086:SF8 1 203 2.6E-148 T 22-04-2016 YPO0483 2ec19fd937651ef7f80a0b26d18d8af9 204 PIRSF PIRSF006324 1 204 5.1E-57 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO0483 2ec19fd937651ef7f80a0b26d18d8af9 204 Pfam PF01810 LysE type translocator 15 203 1.5E-36 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO0483 2ec19fd937651ef7f80a0b26d18d8af9 204 PANTHER PTHR30086 1 203 2.6E-148 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO1049 b977fb34b6fab30544aae4887916a387 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 242 2.7E-101 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPO1049 b977fb34b6fab30544aae4887916a387 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 YPO1049 b977fb34b6fab30544aae4887916a387 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 2.0E-78 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPO1049 b977fb34b6fab30544aae4887916a387 252 PANTHER PTHR10291 16 243 6.9E-118 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPO1049 b977fb34b6fab30544aae4887916a387 252 SUPERFAMILY SSF64005 14 238 4.71E-86 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPO1049 b977fb34b6fab30544aae4887916a387 252 Gene3D G3DSA:3.40.1180.10 14 244 1.9E-94 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPO1049 b977fb34b6fab30544aae4887916a387 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.842 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YPO2597 cbc4f6f64d86c39c8ec90cb00addf3da 85 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 85 31.842 T 22-04-2016 IPR024905 Sec-independent protein translocase protein TatE YPO2597 cbc4f6f64d86c39c8ec90cb00addf3da 85 PANTHER PTHR33162:SF2 1 72 4.7E-46 T 22-04-2016 YPO2597 cbc4f6f64d86c39c8ec90cb00addf3da 85 PANTHER PTHR33162 1 72 4.7E-46 T 22-04-2016 YPO2597 cbc4f6f64d86c39c8ec90cb00addf3da 85 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.1E-18 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YPO2597 cbc4f6f64d86c39c8ec90cb00addf3da 85 Pfam PF02416 mttA/Hcf106 family 4 61 1.2E-12 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YPO2597 cbc4f6f64d86c39c8ec90cb00addf3da 85 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 18.54 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 Pfam PF00384 Molybdopterin oxidoreductase 52 508 2.1E-58 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 Gene3D G3DSA:2.40.40.20 599 751 9.3E-47 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 Gene3D G3DSA:3.40.50.740 46 145 1.3E-41 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 Gene3D G3DSA:3.40.50.740 351 454 1.3E-41 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 SUPERFAMILY SSF50692 618 750 2.69E-32 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 SUPERFAMILY SSF53706 10 627 1.7E-153 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 Gene3D G3DSA:3.40.228.10 146 350 2.1E-44 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 Gene3D G3DSA:3.90.55.10 455 556 6.2E-36 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 Pfam PF01568 Molydopterin dinucleotide binding domain 625 745 1.3E-23 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 PANTHER PTHR11615 18 281 5.3E-282 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 PANTHER PTHR11615 298 368 5.3E-282 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 PANTHER PTHR11615 398 749 5.3E-282 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 PANTHER PTHR11615:SF102 18 281 5.3E-282 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 PANTHER PTHR11615:SF102 298 368 5.3E-282 T 22-04-2016 YPO0794 0a40ccf0093e7a7c44eb6adc26ad5d29 753 PANTHER PTHR11615:SF102 398 749 5.3E-282 T 22-04-2016 YPO2385 0ab071e8cae8c3c0feb5123d818f09b3 288 Pfam PF00877 NlpC/P60 family 170 280 9.4E-32 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO2385 0ab071e8cae8c3c0feb5123d818f09b3 288 SUPERFAMILY SSF54001 151 282 7.36E-40 T 22-04-2016 YPO2385 0ab071e8cae8c3c0feb5123d818f09b3 288 Gene3D G3DSA:3.90.1720.10 150 283 1.5E-45 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO2385 0ab071e8cae8c3c0feb5123d818f09b3 288 PANTHER PTHR21666 161 282 2.1E-40 T 22-04-2016 YPO1242 1fb8e971cab49252855f1c683912458f 502 PIRSF PIRSF007349 1 498 1.1E-156 T 22-04-2016 IPR007067 Tail sheath protein YPO1242 1fb8e971cab49252855f1c683912458f 502 Pfam PF04984 Phage tail sheath protein 8 496 3.4E-47 T 22-04-2016 IPR007067 Tail sheath protein YPO2784 b864334787b565ad2635aeaccdd617ba 508 PANTHER PTHR32282:SF0 5 417 2.1E-91 T 22-04-2016 YPO2784 b864334787b565ad2635aeaccdd617ba 508 SUPERFAMILY SSF56601 5 370 1.36E-90 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO2784 b864334787b565ad2635aeaccdd617ba 508 PANTHER PTHR32282 5 417 2.1E-91 T 22-04-2016 YPO2784 b864334787b565ad2635aeaccdd617ba 508 Gene3D G3DSA:3.40.710.10 5 360 1.4E-74 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO2784 b864334787b565ad2635aeaccdd617ba 508 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 3 506 1.2E-192 T 22-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 YPO2784 b864334787b565ad2635aeaccdd617ba 508 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 419 503 1.8E-14 T 22-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 YPO2784 b864334787b565ad2635aeaccdd617ba 508 Pfam PF00905 Penicillin binding protein transpeptidase domain 38 252 2.4E-18 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YPO0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.2E-94 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YPO0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 PANTHER PTHR30073 1 330 1.4E-202 T 22-04-2016 YPO0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 SUPERFAMILY SSF55681 5 328 7.46E-99 T 22-04-2016 YPO0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 PIRSF PIRSF001555 1 329 3.4E-156 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YPO0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 Gene3D G3DSA:3.30.930.10 2 326 1.4E-153 T 22-04-2016 YPO0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.4E-184 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YPO0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.724 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YPO0003 e1ec9ebe0faf7db5dcbcf5e37e00572f 330 PANTHER PTHR30073:SF5 1 330 1.4E-202 T 22-04-2016 YPO3012 9c19fa37e34d46ec8f906fb036076ac0 363 Gene3D G3DSA:3.40.50.300 3 244 2.2E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3012 9c19fa37e34d46ec8f906fb036076ac0 363 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 8.0E-125 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 YPO3012 9c19fa37e34d46ec8f906fb036076ac0 363 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3012 9c19fa37e34d46ec8f906fb036076ac0 363 PANTHER PTHR24220:SF123 4 281 2.8E-140 T 22-04-2016 YPO3012 9c19fa37e34d46ec8f906fb036076ac0 363 SUPERFAMILY SSF50331 239 326 2.15E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO3012 9c19fa37e34d46ec8f906fb036076ac0 363 SUPERFAMILY SSF52540 3 244 9.35E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3012 9c19fa37e34d46ec8f906fb036076ac0 363 PANTHER PTHR24220 4 281 2.8E-140 T 22-04-2016 YPO3012 9c19fa37e34d46ec8f906fb036076ac0 363 SMART SM00382 27 214 1.4E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3012 9c19fa37e34d46ec8f906fb036076ac0 363 Pfam PF00005 ABC transporter 18 164 8.0E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2627 5c264bfb27eb80a465d0d6df5313be8e 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.253 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YPO2627 5c264bfb27eb80a465d0d6df5313be8e 266 SUPERFAMILY SSF100950 1 263 1.34E-103 T 22-04-2016 YPO2627 5c264bfb27eb80a465d0d6df5313be8e 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 2.7E-138 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YPO2627 5c264bfb27eb80a465d0d6df5313be8e 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 3.3E-21 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 YPO2627 5c264bfb27eb80a465d0d6df5313be8e 266 PANTHER PTHR11280 1 262 1.4E-177 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YPO2627 5c264bfb27eb80a465d0d6df5313be8e 266 Gene3D G3DSA:3.40.50.1360 1 264 8.9E-111 T 22-04-2016 YPO2627 5c264bfb27eb80a465d0d6df5313be8e 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YPO2988 78446c0bd2c148ec8aa68cd5dfe374bd 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 6.0E-25 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor YPO2988 78446c0bd2c148ec8aa68cd5dfe374bd 71 PANTHER PTHR40613:SF1 1 69 6.2E-38 T 22-04-2016 YPO2988 78446c0bd2c148ec8aa68cd5dfe374bd 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 2.1E-31 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor YPO2988 78446c0bd2c148ec8aa68cd5dfe374bd 71 PANTHER PTHR40613 1 69 6.2E-38 T 22-04-2016 YPO3832 7b672f7ea603d7b2880a6060eeb6257b 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 7.7E-60 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 YPO3832 7b672f7ea603d7b2880a6060eeb6257b 206 PANTHER PTHR30086 1 206 7.5E-144 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO3832 7b672f7ea603d7b2880a6060eeb6257b 206 Pfam PF01810 LysE type translocator 14 205 1.2E-50 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YPO3832 7b672f7ea603d7b2880a6060eeb6257b 206 PANTHER PTHR30086:SF1 1 206 7.5E-144 T 22-04-2016 YPO2841 e25bdb0e7db45c63d9b3de13eb97e02d 282 SUPERFAMILY SSF161098 19 273 1.21E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2841 e25bdb0e7db45c63d9b3de13eb97e02d 282 PANTHER PTHR30193 1 280 1.2E-112 T 22-04-2016 YPO2841 e25bdb0e7db45c63d9b3de13eb97e02d 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 271 7.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2841 e25bdb0e7db45c63d9b3de13eb97e02d 282 Gene3D G3DSA:1.10.3720.10 20 274 1.1E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2841 e25bdb0e7db45c63d9b3de13eb97e02d 282 PANTHER PTHR30193:SF20 1 280 1.2E-112 T 22-04-2016 YPO1599 1a3343fac073c996d9e0647deeb84e31 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 4.7E-100 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPO1599 1a3343fac073c996d9e0647deeb84e31 244 Gene3D G3DSA:3.40.50.720 1 243 1.1E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PANTHER PTHR24322:SF635 151 183 3.1E-77 T 22-04-2016 YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PANTHER PTHR24322:SF635 10 135 3.1E-77 T 22-04-2016 YPO1599 1a3343fac073c996d9e0647deeb84e31 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO1599 1a3343fac073c996d9e0647deeb84e31 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 2.3E-5 T 22-04-2016 YPO1599 1a3343fac073c996d9e0647deeb84e31 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 9.2E-66 T 22-04-2016 YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PANTHER PTHR24322 151 183 3.1E-77 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PANTHER PTHR24322 10 135 3.1E-77 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 1a3343fac073c996d9e0647deeb84e31 244 SUPERFAMILY SSF51735 4 243 2.04E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0198 699318a71524e7a6b04f82d0da248795 121 SUPERFAMILY SSF75169 4 121 9.94E-38 T 22-04-2016 IPR027396 DsrEFH-like YPO0198 699318a71524e7a6b04f82d0da248795 121 Gene3D G3DSA:3.40.1260.10 4 121 1.1E-49 T 22-04-2016 IPR027396 DsrEFH-like YPO0198 699318a71524e7a6b04f82d0da248795 121 Hamap MF_00389 Protein TusC [tusC]. 3 121 37.128 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF YPO0198 699318a71524e7a6b04f82d0da248795 121 Pfam PF02635 DsrE/DsrF-like family 4 121 7.9E-25 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein YPO0198 699318a71524e7a6b04f82d0da248795 121 PANTHER PTHR38780 3 121 9.8E-60 T 22-04-2016 YPO0198 699318a71524e7a6b04f82d0da248795 121 PANTHER PTHR38780:SF1 3 121 9.8E-60 T 22-04-2016 YPO0198 699318a71524e7a6b04f82d0da248795 121 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 5 121 2.6E-48 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF YPO2911 ddc988c180d398663805be1c9acb23e0 112 PANTHER PTHR30115 1 112 2.6E-68 T 22-04-2016 YPO2911 ddc988c180d398663805be1c9acb23e0 112 PIRSF PIRSF039144 1 112 2.2E-58 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO2911 ddc988c180d398663805be1c9acb23e0 112 Gene3D G3DSA:3.30.70.120 1 112 9.5E-52 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO2911 ddc988c180d398663805be1c9acb23e0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.5E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO2911 ddc988c180d398663805be1c9acb23e0 112 PRINTS PR00340 P-II protein signature 83 103 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO2911 ddc988c180d398663805be1c9acb23e0 112 PRINTS PR00340 P-II protein signature 52 75 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO2911 ddc988c180d398663805be1c9acb23e0 112 PRINTS PR00340 P-II protein signature 2 17 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO2911 ddc988c180d398663805be1c9acb23e0 112 PRINTS PR00340 P-II protein signature 23 41 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO2911 ddc988c180d398663805be1c9acb23e0 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YPO2911 ddc988c180d398663805be1c9acb23e0 112 SMART SM00938 4 105 6.3E-69 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YPO2911 ddc988c180d398663805be1c9acb23e0 112 SUPERFAMILY SSF54913 1 112 3.18E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO2911 ddc988c180d398663805be1c9acb23e0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YPO2058 054eb81548425a83568a9c3c66137996 334 SMART SM00382 54 181 1.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2058 054eb81548425a83568a9c3c66137996 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 4.6E-149 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YPO2058 054eb81548425a83568a9c3c66137996 334 PANTHER PTHR13779:SF25 1 334 2.7E-193 T 22-04-2016 YPO2058 054eb81548425a83568a9c3c66137996 334 SUPERFAMILY SSF52540 23 255 4.07E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2058 054eb81548425a83568a9c3c66137996 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 8.1E-118 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 YPO2058 054eb81548425a83568a9c3c66137996 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 185.486 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YPO2058 054eb81548425a83568a9c3c66137996 334 Gene3D G3DSA:1.10.8.60 186 258 3.6E-32 T 22-04-2016 YPO2058 054eb81548425a83568a9c3c66137996 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 7.0E-42 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YPO2058 054eb81548425a83568a9c3c66137996 334 Gene3D G3DSA:3.40.50.300 23 178 7.7E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2058 054eb81548425a83568a9c3c66137996 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.1E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YPO2058 054eb81548425a83568a9c3c66137996 334 PANTHER PTHR13779 1 334 2.7E-193 T 22-04-2016 YPO2058 054eb81548425a83568a9c3c66137996 334 Gene3D G3DSA:1.10.10.10 260 330 1.1E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2058 054eb81548425a83568a9c3c66137996 334 SUPERFAMILY SSF46785 260 331 3.27E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1847 1d649e1d3eb5614295de3ab05108c382 220 PANTHER PTHR30614 5 220 4.2E-123 T 22-04-2016 YPO1847 1d649e1d3eb5614295de3ab05108c382 220 Gene3D G3DSA:1.10.3720.10 11 216 6.6E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1847 1d649e1d3eb5614295de3ab05108c382 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 5.6E-33 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO1847 1d649e1d3eb5614295de3ab05108c382 220 SUPERFAMILY SSF161098 13 206 5.49E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1847 1d649e1d3eb5614295de3ab05108c382 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 3.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1847 1d649e1d3eb5614295de3ab05108c382 220 PANTHER PTHR30614:SF18 5 220 4.2E-123 T 22-04-2016 YPO0890 e6110dbf47a55c147b994e2bc0fbf3b4 577 PANTHER PTHR30255:SF2 4 576 6.7E-229 T 22-04-2016 YPO0890 e6110dbf47a55c147b994e2bc0fbf3b4 577 PANTHER PTHR30255 4 576 6.7E-229 T 22-04-2016 YPO0890 e6110dbf47a55c147b994e2bc0fbf3b4 577 Pfam PF01368 DHH family 74 200 9.1E-11 T 22-04-2016 IPR001667 DDH domain YPO0890 e6110dbf47a55c147b994e2bc0fbf3b4 577 SUPERFAMILY SSF64182 49 466 5.49E-117 T 22-04-2016 YPO0890 e6110dbf47a55c147b994e2bc0fbf3b4 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 1.6E-159 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 YPO0890 e6110dbf47a55c147b994e2bc0fbf3b4 577 Pfam PF02272 DHHA1 domain 382 449 4.6E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 YPO3417 32c460a010e888600e12e20e415e1470 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 329 1.4E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 1.2E-68 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.2E-68 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 1.2E-68 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.2E-68 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.2E-68 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.2E-68 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 1.2E-68 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 1.2E-68 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.2E-68 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 Gene3D G3DSA:3.30.390.30 337 463 3.9E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO3417 32c460a010e888600e12e20e415e1470 475 Gene3D G3DSA:3.50.50.60 273 336 5.9E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3417 32c460a010e888600e12e20e415e1470 475 Gene3D G3DSA:3.50.50.60 7 150 5.9E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3417 32c460a010e888600e12e20e415e1470 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 2.1E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YPO3417 32c460a010e888600e12e20e415e1470 475 PIRSF PIRSF000350 1 469 1.5E-85 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 6.2E-41 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 6.2E-41 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 6.2E-41 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 6.2E-41 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 6.2E-41 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 459 5.0E-149 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 YPO3417 32c460a010e888600e12e20e415e1470 475 SUPERFAMILY SSF51905 1 338 5.19E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3417 32c460a010e888600e12e20e415e1470 475 Gene3D G3DSA:3.50.50.60 153 272 2.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3417 32c460a010e888600e12e20e415e1470 475 SUPERFAMILY SSF55424 344 467 5.84E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YPO3417 32c460a010e888600e12e20e415e1470 475 PANTHER PTHR22912:SF160 1 460 1.9E-274 T 22-04-2016 YPO3417 32c460a010e888600e12e20e415e1470 475 PANTHER PTHR22912 1 460 1.9E-274 T 22-04-2016 YPO2728 fa4cdcfdc6103e9725aef29d85f256b0 159 PANTHER PTHR38595:SF1 1 159 7.2E-96 T 22-04-2016 YPO2728 fa4cdcfdc6103e9725aef29d85f256b0 159 Gene3D G3DSA:3.10.450.40 86 141 4.1E-4 T 22-04-2016 YPO2728 fa4cdcfdc6103e9725aef29d85f256b0 159 Pfam PF04965 Gene 25-like lysozyme 36 136 1.1E-16 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO2728 fa4cdcfdc6103e9725aef29d85f256b0 159 SUPERFAMILY SSF160719 72 144 1.18E-10 T 22-04-2016 YPO2728 fa4cdcfdc6103e9725aef29d85f256b0 159 PANTHER PTHR38595 1 159 7.2E-96 T 22-04-2016 YPO1104 a27963efa29c314af6e200015a87246c 116 Pfam PF04355 SmpA / OmlA family 38 107 1.4E-25 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 YPO1104 a27963efa29c314af6e200015a87246c 116 PANTHER PTHR37482:SF1 3 116 2.0E-56 T 22-04-2016 YPO1104 a27963efa29c314af6e200015a87246c 116 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 115 31.46 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE YPO1104 a27963efa29c314af6e200015a87246c 116 PANTHER PTHR37482 3 116 2.0E-56 T 22-04-2016 YPO0272 0f93344a4102c3fc00050eab92f96928 264 PANTHER PTHR30065 1 260 3.9E-182 T 22-04-2016 YPO0272 0f93344a4102c3fc00050eab92f96928 264 Pfam PF01311 Bacterial export proteins, family 1 9 243 1.2E-52 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO0272 0f93344a4102c3fc00050eab92f96928 264 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 248 3.1E-72 T 22-04-2016 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 YPO0272 0f93344a4102c3fc00050eab92f96928 264 PANTHER PTHR30065:SF3 1 260 3.9E-182 T 22-04-2016 YPO0272 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 6.1E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO0272 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 6.1E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO0272 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 6.1E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO0272 0f93344a4102c3fc00050eab92f96928 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 6.1E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 Gene3D G3DSA:2.40.50.140 5 68 1.7E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 SUPERFAMILY SSF50249 3 69 1.49E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 43 61 6.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 7 22 6.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 28 37 6.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 PIRSF PIRSF002599 1 70 1.7E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 PANTHER PTHR11544 1 70 4.2E-48 T 22-04-2016 YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 PANTHER PTHR11544:SF54 1 70 4.2E-48 T 22-04-2016 YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 SMART SM00357 6 70 3.3E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YPO2659 2a87be951f9f5e5360ee4d71855f0ca3 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.9E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YPO1486 151b228486a9e66123a066373597243d 361 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 319 1.4E-69 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPO1486 151b228486a9e66123a066373597243d 361 PANTHER PTHR35564:SF3 2 351 3.2E-195 T 22-04-2016 YPO1486 151b228486a9e66123a066373597243d 361 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 22 319 2.9E-79 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YPO1486 151b228486a9e66123a066373597243d 361 PANTHER PTHR35564 2 351 3.2E-195 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.505 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.0E-40 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.0E-40 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.0E-40 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.0E-40 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.0E-40 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PANTHER PTHR11405 3 170 4.1E-258 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PANTHER PTHR11405 186 380 4.1E-258 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 SMART SM01097 3 133 1.2E-90 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 Gene3D G3DSA:3.50.30.20 4 147 1.7E-62 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 Pfam PF00117 Glutamine amidotransferase class-I 197 372 5.9E-48 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 SUPERFAMILY SSF52021 3 143 7.32E-57 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 Gene3D G3DSA:3.40.50.880 154 378 5.7E-83 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 6.3E-150 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 6.3E-52 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.4E-11 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.4E-11 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.4E-11 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 22-04-2016 YPO0481 5fafb031a88fa1431c7d72649807b3a2 391 SUPERFAMILY SSF52317 153 378 8.87E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO3504 524f9a37afb9fd3e90e1f58a348a1b3b 97 Gene3D G3DSA:3.30.110.60 1 94 1.8E-33 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPO3504 524f9a37afb9fd3e90e1f58a348a1b3b 97 SMART SM01103 3 86 7.0E-41 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPO3504 524f9a37afb9fd3e90e1f58a348a1b3b 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 2.0E-44 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPO3504 524f9a37afb9fd3e90e1f58a348a1b3b 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 5.6E-38 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 YPO3504 524f9a37afb9fd3e90e1f58a348a1b3b 97 SUPERFAMILY SSF75471 1 96 7.19E-31 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPO3504 524f9a37afb9fd3e90e1f58a348a1b3b 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.2E-22 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YPO3504 524f9a37afb9fd3e90e1f58a348a1b3b 97 PANTHER PTHR31846 1 97 2.0E-44 T 22-04-2016 YPO1318 ab07d713af53ba26135617a562136bb4 328 Pfam PF00005 ABC transporter 21 169 1.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1318 ab07d713af53ba26135617a562136bb4 328 SUPERFAMILY SSF52540 1 236 2.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1318 ab07d713af53ba26135617a562136bb4 328 SUPERFAMILY SSF55021 253 327 2.86E-10 T 22-04-2016 YPO1318 ab07d713af53ba26135617a562136bb4 328 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1318 ab07d713af53ba26135617a562136bb4 328 PANTHER PTHR24220:SF186 3 257 1.0E-149 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 YPO1318 ab07d713af53ba26135617a562136bb4 328 SMART SM00382 30 226 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1318 ab07d713af53ba26135617a562136bb4 328 Gene3D G3DSA:3.30.70.260 253 328 1.2E-10 T 22-04-2016 YPO1318 ab07d713af53ba26135617a562136bb4 328 PANTHER PTHR24220 3 257 1.0E-149 T 22-04-2016 YPO1318 ab07d713af53ba26135617a562136bb4 328 Pfam PF09383 NIL domain 255 326 1.8E-13 T 22-04-2016 IPR018449 NIL domain YPO1318 ab07d713af53ba26135617a562136bb4 328 Gene3D G3DSA:3.40.50.300 1 236 7.8E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1318 ab07d713af53ba26135617a562136bb4 328 SMART SM00930 251 328 2.2E-10 T 22-04-2016 IPR018449 NIL domain YPO2381 8c4dbe1766a84f73ec05c8f9ea5586f8 135 PANTHER PTHR10374 1 129 6.9E-59 T 22-04-2016 YPO2381 8c4dbe1766a84f73ec05c8f9ea5586f8 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 3.6E-67 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 YPO2381 8c4dbe1766a84f73ec05c8f9ea5586f8 135 Gene3D G3DSA:3.10.180.10 1 127 1.4E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO2381 8c4dbe1766a84f73ec05c8f9ea5586f8 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.6E-26 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPO2381 8c4dbe1766a84f73ec05c8f9ea5586f8 135 SUPERFAMILY SSF54593 1 128 3.62E-35 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO2381 8c4dbe1766a84f73ec05c8f9ea5586f8 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 YPO2670 8eec57ebe472f595c5912a7e523754e9 220 PANTHER PTHR31715 8 220 3.1E-117 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YPO2670 8eec57ebe472f595c5912a7e523754e9 220 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 13 209 6.6E-79 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YPO2670 8eec57ebe472f595c5912a7e523754e9 220 PIRSF PIRSF005624 2 217 2.1E-47 T 22-04-2016 YPO2670 8eec57ebe472f595c5912a7e523754e9 220 Hamap MF_01389 Urease accessory protein UreG [ureG]. 10 211 45.13 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YPO2670 8eec57ebe472f595c5912a7e523754e9 220 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 14 185 2.0E-30 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPO2670 8eec57ebe472f595c5912a7e523754e9 220 Gene3D G3DSA:3.40.50.300 10 204 2.6E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2670 8eec57ebe472f595c5912a7e523754e9 220 SUPERFAMILY SSF52540 8 206 2.18E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0815 50a79615535929ebc9be99f2d434c8af 503 PANTHER PTHR30258:SF9 13 503 9.5E-287 T 22-04-2016 YPO0815 50a79615535929ebc9be99f2d434c8af 503 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 13 494 6.4E-191 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 YPO0815 50a79615535929ebc9be99f2d434c8af 503 SMART SM00382 249 367 0.0027 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0815 50a79615535929ebc9be99f2d434c8af 503 SUPERFAMILY SSF160246 11 75 1.07E-11 T 22-04-2016 YPO0815 50a79615535929ebc9be99f2d434c8af 503 PANTHER PTHR30258 13 503 9.5E-287 T 22-04-2016 YPO0815 50a79615535929ebc9be99f2d434c8af 503 Gene3D G3DSA:3.30.450.90 90 221 1.6E-49 T 22-04-2016 YPO0815 50a79615535929ebc9be99f2d434c8af 503 Pfam PF00437 Type II/IV secretion system protein 123 388 9.3E-81 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPO0815 50a79615535929ebc9be99f2d434c8af 503 Gene3D G3DSA:3.40.50.300 227 499 5.7E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0815 50a79615535929ebc9be99f2d434c8af 503 SUPERFAMILY SSF52540 105 494 2.53E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0815 50a79615535929ebc9be99f2d434c8af 503 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 316 330 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YPO0199 d6cc21370f7619b78754c5bf8975bc98 95 Gene3D G3DSA:3.40.1260.10 1 93 2.0E-33 T 22-04-2016 IPR027396 DsrEFH-like YPO0199 d6cc21370f7619b78754c5bf8975bc98 95 Pfam PF04077 DsrH like protein 7 92 2.1E-29 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 YPO0199 d6cc21370f7619b78754c5bf8975bc98 95 PANTHER PTHR37526 1 95 1.8E-37 T 22-04-2016 YPO0199 d6cc21370f7619b78754c5bf8975bc98 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 29.501 T 22-04-2016 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 YPO0199 d6cc21370f7619b78754c5bf8975bc98 95 SUPERFAMILY SSF75169 1 95 9.42E-31 T 22-04-2016 IPR027396 DsrEFH-like YPO0199 d6cc21370f7619b78754c5bf8975bc98 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 2.0E-31 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 YPO2856 d7ac21d87460bcd301116b1c3ede3a5b 296 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 126 8.0E-27 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 YPO2856 d7ac21d87460bcd301116b1c3ede3a5b 296 SMART SM00046 3 129 5.4E-17 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 YPO2856 d7ac21d87460bcd301116b1c3ede3a5b 296 SUPERFAMILY SSF111331 1 293 1.77E-69 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain YPO2856 d7ac21d87460bcd301116b1c3ede3a5b 296 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 1 296 50.394 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 YPO2856 d7ac21d87460bcd301116b1c3ede3a5b 296 PANTHER PTHR12358 2 294 1.6E-69 T 22-04-2016 YPO2856 d7ac21d87460bcd301116b1c3ede3a5b 296 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 3 295 1.7E-152 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 YPO2856 d7ac21d87460bcd301116b1c3ede3a5b 296 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 290 2.0E-92 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase YPO1805 180d1f937ea5ee83e20269900c319b25 229 PRINTS PR01008 Flagellar L-ring protein signature 190 204 3.1E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO1805 180d1f937ea5ee83e20269900c319b25 229 PRINTS PR01008 Flagellar L-ring protein signature 206 220 3.1E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO1805 180d1f937ea5ee83e20269900c319b25 229 PRINTS PR01008 Flagellar L-ring protein signature 70 82 3.1E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO1805 180d1f937ea5ee83e20269900c319b25 229 PRINTS PR01008 Flagellar L-ring protein signature 143 158 3.1E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO1805 180d1f937ea5ee83e20269900c319b25 229 PRINTS PR01008 Flagellar L-ring protein signature 169 185 3.1E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO1805 180d1f937ea5ee83e20269900c319b25 229 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 227 27.546 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO1805 180d1f937ea5ee83e20269900c319b25 229 PANTHER PTHR34933:SF1 2 229 3.3E-86 T 22-04-2016 YPO1805 180d1f937ea5ee83e20269900c319b25 229 PANTHER PTHR34933 2 229 3.3E-86 T 22-04-2016 YPO1805 180d1f937ea5ee83e20269900c319b25 229 Pfam PF02107 Flagellar L-ring protein 45 228 3.5E-59 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO3633 744faa37c194f49620be8071d5afa128 352 PANTHER PTHR32196 1 320 1.4E-204 T 22-04-2016 YPO3633 744faa37c194f49620be8071d5afa128 352 PANTHER PTHR32196:SF36 1 320 1.4E-204 T 22-04-2016 YPO3633 744faa37c194f49620be8071d5afa128 352 Gene3D G3DSA:3.40.50.2300 53 172 1.3E-30 T 22-04-2016 YPO3633 744faa37c194f49620be8071d5afa128 352 Gene3D G3DSA:3.40.50.2300 173 305 2.4E-25 T 22-04-2016 YPO3633 744faa37c194f49620be8071d5afa128 352 Pfam PF13407 Periplasmic binding protein domain 55 312 1.3E-53 T 22-04-2016 IPR025997 Periplasmic binding protein YPO3633 744faa37c194f49620be8071d5afa128 352 SUPERFAMILY SSF53822 51 350 5.8E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO1564 2949b2247dc916c522410c68091ebb24 141 PANTHER PTHR33639 5 141 5.1E-95 T 22-04-2016 YPO1564 2949b2247dc916c522410c68091ebb24 141 PANTHER PTHR33639:SF3 5 141 5.1E-95 T 22-04-2016 YPO1564 2949b2247dc916c522410c68091ebb24 141 Pfam PF04134 Protein of unknown function, DUF393 16 125 5.0E-35 T 22-04-2016 IPR007263 Protein of unknown function DUF393 YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 1.1E-50 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR01401 Mutator MutT protein signature 77 90 1.5E-10 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR01401 Mutator MutT protein signature 2 23 1.5E-10 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 SUPERFAMILY SSF55811 1 126 5.69E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 Pfam PF00293 NUDIX domain 6 124 5.5E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 PANTHER PTHR22769 1 126 1.9E-80 T 22-04-2016 YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 Gene3D G3DSA:3.90.79.10 4 127 9.6E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.6E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.6E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 PANTHER PTHR22769:SF36 1 126 1.9E-80 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YPO0565 7ef68f24bf10ee3b5d60bc250413e543 128 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YPO1264 a73d7a4ae17e4e339f01d3b3e5722fce 94 Pfam PF01386 Ribosomal L25p family 4 91 6.2E-23 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YPO1264 a73d7a4ae17e4e339f01d3b3e5722fce 94 Gene3D G3DSA:2.40.240.10 2 94 8.5E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 YPO1264 a73d7a4ae17e4e339f01d3b3e5722fce 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 26.652 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 YPO1264 a73d7a4ae17e4e339f01d3b3e5722fce 94 SUPERFAMILY SSF50715 1 94 1.92E-29 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 YPO1264 a73d7a4ae17e4e339f01d3b3e5722fce 94 PANTHER PTHR33284 1 94 5.1E-42 T 22-04-2016 YPO1264 a73d7a4ae17e4e339f01d3b3e5722fce 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 94 2.0E-45 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YPO2590 b1bbe9138fba663d9657e867b26a9061 64 Pfam PF08971 Glycogen synthesis protein 11 58 5.1E-10 T 22-04-2016 IPR015065 Surface composition regulator YPO2590 b1bbe9138fba663d9657e867b26a9061 64 Gene3D G3DSA:1.20.58.250 11 64 2.7E-17 T 22-04-2016 IPR011326 Homologue of theta DNA polymerase III YPO2590 b1bbe9138fba663d9657e867b26a9061 64 SUPERFAMILY SSF46575 15 60 4.19E-8 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YPO0426 2011b1147f1eb9eb052634d6a3f1c200 110 Pfam PF07256 Protein of unknown function (DUF1435) 33 105 3.1E-31 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 YPO0426 2011b1147f1eb9eb052634d6a3f1c200 110 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 32 86 7.0E-24 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 YPO3019 30f33e0c3246e9d579bac841a799cfca 151 Gene3D G3DSA:2.60.120.370 4 148 1.3E-47 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPO3019 30f33e0c3246e9d579bac841a799cfca 151 SUPERFAMILY SSF51197 3 149 3.57E-44 T 22-04-2016 YPO3019 30f33e0c3246e9d579bac841a799cfca 151 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 2 148 8.5E-45 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPO3019 30f33e0c3246e9d579bac841a799cfca 151 PANTHER PTHR34986 1 150 2.4E-93 T 22-04-2016 YPO3019 30f33e0c3246e9d579bac841a799cfca 151 Pfam PF04074 Domain of unknown function (DUF386) 10 145 5.3E-40 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPO3019 30f33e0c3246e9d579bac841a799cfca 151 PANTHER PTHR34986:SF2 1 150 2.4E-93 T 22-04-2016 YPO0398 945915502f6e7e837f6bcd9a813baddd 348 PANTHER PTHR22726:SF7 1 348 1.4E-162 T 22-04-2016 YPO0398 945915502f6e7e837f6bcd9a813baddd 348 Gene3D G3DSA:3.30.2010.10 176 237 2.7E-11 T 22-04-2016 YPO0398 945915502f6e7e837f6bcd9a813baddd 348 PANTHER PTHR22726 1 348 1.4E-162 T 22-04-2016 YPO0398 945915502f6e7e837f6bcd9a813baddd 348 Pfam PF01435 Peptidase family M48 157 340 1.3E-26 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YPO2512 2b24e51f6e21b28246513635682a98a2 247 Gene3D G3DSA:3.40.190.10 207 245 7.2E-46 T 22-04-2016 YPO2512 2b24e51f6e21b28246513635682a98a2 247 Gene3D G3DSA:3.40.190.10 24 102 7.2E-46 T 22-04-2016 YPO2512 2b24e51f6e21b28246513635682a98a2 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 243 4.1E-69 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2512 2b24e51f6e21b28246513635682a98a2 247 SMART SM00062 26 245 2.1E-73 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2512 2b24e51f6e21b28246513635682a98a2 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPO2512 2b24e51f6e21b28246513635682a98a2 247 Gene3D G3DSA:3.40.190.10 103 206 1.1E-32 T 22-04-2016 YPO2512 2b24e51f6e21b28246513635682a98a2 247 SUPERFAMILY SSF53850 8 244 3.37E-75 T 22-04-2016 YPO2512 2b24e51f6e21b28246513635682a98a2 247 SMART SM00079 26 244 5.8E-8 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YPO2512 2b24e51f6e21b28246513635682a98a2 247 PANTHER PTHR18966 25 243 3.2E-64 T 22-04-2016 YPO3236 3d18537a3053854a95b35b035ab4c400 198 PANTHER PTHR30335:SF1 2 198 9.5E-144 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO3236 3d18537a3053854a95b35b035ab4c400 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 5.7E-103 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO3236 3d18537a3053854a95b35b035ab4c400 198 PANTHER PTHR30335 2 198 9.5E-144 T 22-04-2016 YPO3236 3d18537a3053854a95b35b035ab4c400 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.32 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YPO3236 3d18537a3053854a95b35b035ab4c400 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 4.9E-58 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO3236 3d18537a3053854a95b35b035ab4c400 198 PIRSF PIRSF006102 1 198 2.9E-64 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO1569 6e2207647a187998e232e1f203e3f394 381 SUPERFAMILY SSF51395 223 374 7.33E-99 T 22-04-2016 YPO1569 6e2207647a187998e232e1f203e3f394 381 SUPERFAMILY SSF51395 7 193 7.33E-99 T 22-04-2016 YPO1569 6e2207647a187998e232e1f203e3f394 381 PANTHER PTHR10578:SF65 7 375 2.0E-165 T 22-04-2016 YPO1569 6e2207647a187998e232e1f203e3f394 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.702 T 22-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 YPO1569 6e2207647a187998e232e1f203e3f394 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 22-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 YPO1569 6e2207647a187998e232e1f203e3f394 381 Gene3D G3DSA:3.20.20.70 7 377 2.6E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1569 6e2207647a187998e232e1f203e3f394 381 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.3E-125 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 YPO1569 6e2207647a187998e232e1f203e3f394 381 PIRSF PIRSF000138 2 380 3.0E-122 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 YPO1569 6e2207647a187998e232e1f203e3f394 381 PANTHER PTHR10578 7 375 2.0E-165 T 22-04-2016 YPO4101 510914fba22b3ad18df9553c6e8ea155 119 Pfam PF00825 Ribonuclease P 6 111 2.7E-32 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YPO4101 510914fba22b3ad18df9553c6e8ea155 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 YPO4101 510914fba22b3ad18df9553c6e8ea155 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 98 3.0E-42 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YPO4101 510914fba22b3ad18df9553c6e8ea155 119 Gene3D G3DSA:3.30.230.10 5 115 5.4E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO4101 510914fba22b3ad18df9553c6e8ea155 119 SUPERFAMILY SSF54211 5 114 9.36E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO4101 510914fba22b3ad18df9553c6e8ea155 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 114 6.3E-36 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YPO4101 510914fba22b3ad18df9553c6e8ea155 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.542 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YPO4101 510914fba22b3ad18df9553c6e8ea155 119 PANTHER PTHR33992 2 119 2.2E-44 T 22-04-2016 YPO1720 9586d16f2670f5f0167c685012297ac2 375 PANTHER PTHR24220:SF151 5 318 5.7E-155 T 22-04-2016 YPO1720 9586d16f2670f5f0167c685012297ac2 375 Pfam PF00005 ABC transporter 21 162 3.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1720 9586d16f2670f5f0167c685012297ac2 375 PANTHER PTHR24220 5 318 5.7E-155 T 22-04-2016 YPO1720 9586d16f2670f5f0167c685012297ac2 375 Gene3D G3DSA:3.40.50.300 6 240 1.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1720 9586d16f2670f5f0167c685012297ac2 375 Gene3D G3DSA:2.40.50.100 359 373 2.5E-12 T 22-04-2016 YPO1720 9586d16f2670f5f0167c685012297ac2 375 Gene3D G3DSA:2.40.50.100 245 294 2.5E-12 T 22-04-2016 YPO1720 9586d16f2670f5f0167c685012297ac2 375 SUPERFAMILY SSF50331 243 373 8.02E-21 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO1720 9586d16f2670f5f0167c685012297ac2 375 SMART SM00382 29 217 2.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1720 9586d16f2670f5f0167c685012297ac2 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1720 9586d16f2670f5f0167c685012297ac2 375 SUPERFAMILY SSF52540 6 247 1.25E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2089 71f220231a3eee0e211df74a1ac00846 142 SUPERFAMILY SSF103370 2 134 1.31E-53 T 22-04-2016 IPR008711 Recombinase NinB YPO2089 71f220231a3eee0e211df74a1ac00846 142 Pfam PF05772 NinB protein 2 121 3.1E-52 T 22-04-2016 IPR008711 Recombinase NinB YPO2089 71f220231a3eee0e211df74a1ac00846 142 Gene3D G3DSA:1.10.3790.10 2 137 2.2E-54 T 22-04-2016 IPR008711 Recombinase NinB YPO0355 56535fcb6f4afc72afb033514c17ac8c 104 SUPERFAMILY SSF103481 5 103 1.83E-21 T 22-04-2016 YPO0355 56535fcb6f4afc72afb033514c17ac8c 104 PANTHER PTHR30561 1 104 8.5E-54 T 22-04-2016 YPO0355 56535fcb6f4afc72afb033514c17ac8c 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.1E-32 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YPO0355 56535fcb6f4afc72afb033514c17ac8c 104 PANTHER PTHR30561:SF0 1 104 8.5E-54 T 22-04-2016 YPO0501 811dfcfc5146597a1d58d7acb2a403ed 503 PANTHER PTHR35565:SF2 1 500 0.0 T 22-04-2016 YPO0501 811dfcfc5146597a1d58d7acb2a403ed 503 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 495 1.8E-209 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO0501 811dfcfc5146597a1d58d7acb2a403ed 503 PANTHER PTHR35565 1 500 0.0 T 22-04-2016 YPO0501 811dfcfc5146597a1d58d7acb2a403ed 503 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 71 495 1.3E-181 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO0139 e286e4b1a481862130239884ae54da8e 293 PIRSF PIRSF005261 1 285 3.0E-74 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YPO0139 e286e4b1a481862130239884ae54da8e 293 PANTHER PTHR30111 1 289 1.7E-92 T 22-04-2016 YPO0139 e286e4b1a481862130239884ae54da8e 293 Pfam PF01430 Hsp33 protein 5 274 4.6E-87 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YPO0139 e286e4b1a481862130239884ae54da8e 293 SUPERFAMILY SSF64397 4 233 6.93E-77 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 YPO0139 e286e4b1a481862130239884ae54da8e 293 Gene3D G3DSA:1.10.287.480 179 226 3.2E-26 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain YPO0139 e286e4b1a481862130239884ae54da8e 293 PANTHER PTHR30111:SF1 1 289 1.7E-92 T 22-04-2016 YPO0139 e286e4b1a481862130239884ae54da8e 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 285 32.367 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YPO0139 e286e4b1a481862130239884ae54da8e 293 Gene3D G3DSA:3.90.1280.10 227 283 1.8E-23 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 YPO0139 e286e4b1a481862130239884ae54da8e 293 SUPERFAMILY SSF118352 226 283 1.7E-19 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 YPO0139 e286e4b1a481862130239884ae54da8e 293 Gene3D G3DSA:3.55.30.10 2 177 3.3E-67 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 YPO3611a 28879fa6dd41ca9f221fa127bb65801d 74 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 19 70 4.6E-22 T 22-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 YPO3611a 28879fa6dd41ca9f221fa127bb65801d 74 Gene3D G3DSA:2.10.260.10 45 70 9.4E-4 T 22-04-2016 YPO3780 7c35cb537220aaab425a44a68ac3b7ee 210 PANTHER PTHR38693 5 210 6.0E-75 T 22-04-2016 YPO3780 7c35cb537220aaab425a44a68ac3b7ee 210 PANTHER PTHR38693:SF1 5 210 6.0E-75 T 22-04-2016 YPO3780 7c35cb537220aaab425a44a68ac3b7ee 210 Pfam PF02036 SCP-2 sterol transfer family 28 122 9.4E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPO3780 7c35cb537220aaab425a44a68ac3b7ee 210 SUPERFAMILY SSF55718 31 127 2.51E-7 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YPO1670 7a20a5fc4d15d4f810d2734c46ce38db 328 Gene3D G3DSA:3.20.20.150 1 232 6.0E-36 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1670 7a20a5fc4d15d4f810d2734c46ce38db 328 PANTHER PTHR12110 1 230 7.3E-12 T 22-04-2016 YPO1670 7a20a5fc4d15d4f810d2734c46ce38db 328 SUPERFAMILY SSF51658 18 231 1.66E-29 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1670 7a20a5fc4d15d4f810d2734c46ce38db 328 Pfam PF01261 Xylose isomerase-like TIM barrel 26 218 7.1E-18 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3511 69554d2aa512d229762d0879d739589d 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.0E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3511 69554d2aa512d229762d0879d739589d 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.288 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3511 69554d2aa512d229762d0879d739589d 85 Gene3D G3DSA:2.40.50.100 20 82 9.8E-32 T 22-04-2016 YPO3511 69554d2aa512d229762d0879d739589d 85 SUPERFAMILY SSF110324 2 79 1.88E-34 T 22-04-2016 YPO3511 69554d2aa512d229762d0879d739589d 85 PANTHER PTHR15893 1 85 5.8E-53 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3511 69554d2aa512d229762d0879d739589d 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.1E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3511 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3511 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3511 69554d2aa512d229762d0879d739589d 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3511 69554d2aa512d229762d0879d739589d 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3511 69554d2aa512d229762d0879d739589d 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 Gene3D G3DSA:3.30.420.40 85 217 2.1E-28 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 Gene3D G3DSA:3.30.420.40 2 43 2.1E-28 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 SUPERFAMILY SSF53067 85 204 3.24E-26 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 SUPERFAMILY SSF53067 1 44 3.24E-26 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 PANTHER PTHR19375:SF182 322 442 2.1E-147 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 PANTHER PTHR19375:SF182 2 44 2.1E-147 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 PANTHER PTHR19375:SF182 85 269 2.1E-147 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 Gene3D G3DSA:3.30.420.40 218 241 5.3E-17 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 Gene3D G3DSA:3.30.420.40 374 433 5.3E-17 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 Pfam PF00012 Hsp70 protein 130 228 6.1E-10 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 Pfam PF00012 Hsp70 protein 331 422 1.0E-5 T 22-04-2016 IPR013126 Heat shock protein 70 family YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 SUPERFAMILY SSF53067 208 276 2.07E-32 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 SUPERFAMILY SSF53067 328 447 2.07E-32 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 PANTHER PTHR19375 322 442 2.1E-147 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 PANTHER PTHR19375 2 44 2.1E-147 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 PANTHER PTHR19375 85 269 2.1E-147 T 22-04-2016 YPO2840 baa67ff7826bdd5183b2d4a2ae847cee 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YPO1515 72502283a690d3213c9657be2b51a228 393 PANTHER PTHR23546 1 392 1.6E-129 T 22-04-2016 YPO1515 72502283a690d3213c9657be2b51a228 393 PANTHER PTHR23546:SF1 1 392 1.6E-129 T 22-04-2016 YPO1515 72502283a690d3213c9657be2b51a228 393 Pfam PF07690 Major Facilitator Superfamily 11 352 9.8E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1515 72502283a690d3213c9657be2b51a228 393 SUPERFAMILY SSF103473 11 389 1.57E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1515 72502283a690d3213c9657be2b51a228 393 Gene3D G3DSA:1.20.1250.20 8 179 3.0E-26 T 22-04-2016 YPO1515 72502283a690d3213c9657be2b51a228 393 Gene3D G3DSA:1.20.1250.20 208 387 1.3E-15 T 22-04-2016 YPO1043 0960116e65a5a41372ac8347665c024c 263 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPO1043 0960116e65a5a41372ac8347665c024c 263 Gene3D G3DSA:3.90.230.10 3 259 6.3E-99 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO1043 0960116e65a5a41372ac8347665c024c 263 PANTHER PTHR10804:SF75 1 260 1.4E-190 T 22-04-2016 YPO1043 0960116e65a5a41372ac8347665c024c 263 Pfam PF00557 Metallopeptidase family M24 13 242 1.5E-51 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO1043 0960116e65a5a41372ac8347665c024c 263 SUPERFAMILY SSF55920 3 255 4.06E-90 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO1043 0960116e65a5a41372ac8347665c024c 263 PANTHER PTHR10804 1 260 1.4E-190 T 22-04-2016 YPO1043 0960116e65a5a41372ac8347665c024c 263 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 2.6E-108 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPO1043 0960116e65a5a41372ac8347665c024c 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO1043 0960116e65a5a41372ac8347665c024c 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO1043 0960116e65a5a41372ac8347665c024c 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO1043 0960116e65a5a41372ac8347665c024c 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.2E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO1043 0960116e65a5a41372ac8347665c024c 263 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.208 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YPO0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 Hamap MF_01626 Protein ViaA [viaA]. 1 488 60.3 T 22-04-2016 IPR023481 Uncharacterised protein family ViaA YPO0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 SUPERFAMILY SSF53300 323 465 1.26E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 SMART SM00327 324 488 1.4E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 PANTHER PTHR36846 1 488 1.4E-144 T 22-04-2016 YPO0004 e2c9e5e6d0e3b07fa611924d520dfb19 488 Pfam PF05762 VWA domain containing CoxE-like protein 310 441 1.5E-8 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like YPO3410 d78ad99971c4ede6f7eea960215e33e4 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 24 106 7.3E-9 T 22-04-2016 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPO3410 d78ad99971c4ede6f7eea960215e33e4 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 35 113 2.0E-42 T 22-04-2016 YPO2980 3e6c922c6040b4fc9467e672c1ec4e22 329 PANTHER PTHR11732:SF191 13 329 3.5E-188 T 22-04-2016 YPO2980 3e6c922c6040b4fc9467e672c1ec4e22 329 Gene3D G3DSA:3.20.20.100 13 327 2.4E-84 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2980 3e6c922c6040b4fc9467e672c1ec4e22 329 Pfam PF00248 Aldo/keto reductase family 28 328 9.0E-68 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2980 3e6c922c6040b4fc9467e672c1ec4e22 329 SUPERFAMILY SSF51430 13 327 2.23E-87 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2980 3e6c922c6040b4fc9467e672c1ec4e22 329 PANTHER PTHR11732 13 329 3.5E-188 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPO2257 06830bc9181632d4b37ac4943dd4e909 349 PANTHER PTHR32196:SF37 13 349 6.6E-251 T 22-04-2016 YPO2257 06830bc9181632d4b37ac4943dd4e909 349 PANTHER PTHR32196 13 349 6.6E-251 T 22-04-2016 YPO2257 06830bc9181632d4b37ac4943dd4e909 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 79 336 7.0E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO0464 c88625a97d1e646e4330a22694f8c042 195 Gene3D G3DSA:3.40.980.10 3 186 5.7E-53 T 22-04-2016 IPR001453 MoaB/Mog domain YPO0464 c88625a97d1e646e4330a22694f8c042 195 SMART SM00852 7 153 8.1E-22 T 22-04-2016 IPR001453 MoaB/Mog domain YPO0464 c88625a97d1e646e4330a22694f8c042 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 4.1E-40 T 22-04-2016 IPR001453 MoaB/Mog domain YPO0464 c88625a97d1e646e4330a22694f8c042 195 SUPERFAMILY SSF53218 3 187 3.4E-48 T 22-04-2016 IPR001453 MoaB/Mog domain YPO0464 c88625a97d1e646e4330a22694f8c042 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 3.5E-28 T 22-04-2016 IPR001453 MoaB/Mog domain YPO0464 c88625a97d1e646e4330a22694f8c042 195 PANTHER PTHR10192 1 193 1.5E-91 T 22-04-2016 YPO0464 c88625a97d1e646e4330a22694f8c042 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 YPO2268 e091f453d629023d18ff32bc28ec49e1 405 Gene3D G3DSA:3.30.420.40 223 373 4.7E-40 T 22-04-2016 YPO2268 e091f453d629023d18ff32bc28ec49e1 405 Pfam PF00480 ROK family 96 389 1.8E-49 T 22-04-2016 IPR000600 ROK family YPO2268 e091f453d629023d18ff32bc28ec49e1 405 SUPERFAMILY SSF53067 88 394 4.51E-43 T 22-04-2016 YPO2268 e091f453d629023d18ff32bc28ec49e1 405 PANTHER PTHR18964 63 402 6.9E-258 T 22-04-2016 YPO2268 e091f453d629023d18ff32bc28ec49e1 405 SUPERFAMILY SSF46785 12 77 1.23E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2268 e091f453d629023d18ff32bc28ec49e1 405 Gene3D G3DSA:1.10.10.10 12 81 2.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2268 e091f453d629023d18ff32bc28ec49e1 405 Gene3D G3DSA:3.30.420.40 83 222 1.5E-31 T 22-04-2016 YPO2268 e091f453d629023d18ff32bc28ec49e1 405 PANTHER PTHR18964:SF127 63 402 6.9E-258 T 22-04-2016 YPO2011 4995e35a33adea46982edbd2c5c4d2bd 196 Gene3D G3DSA:3.40.50.1470 4 193 6.0E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPO2011 4995e35a33adea46982edbd2c5c4d2bd 196 PANTHER PTHR17224 1 195 3.0E-83 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPO2011 4995e35a33adea46982edbd2c5c4d2bd 196 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 5.5E-52 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPO2011 4995e35a33adea46982edbd2c5c4d2bd 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.339 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPO2011 4995e35a33adea46982edbd2c5c4d2bd 196 PANTHER PTHR17224:SF1 1 195 3.0E-83 T 22-04-2016 YPO2011 4995e35a33adea46982edbd2c5c4d2bd 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YPO2011 4995e35a33adea46982edbd2c5c4d2bd 196 SUPERFAMILY SSF53178 4 193 3.14E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPO2011 4995e35a33adea46982edbd2c5c4d2bd 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YPO2011 4995e35a33adea46982edbd2c5c4d2bd 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 1.4E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YPO0770 9bc47a55b65055f80512a769a9713ead 585 SUPERFAMILY SSF90123 21 318 7.06E-45 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO0770 9bc47a55b65055f80512a769a9713ead 585 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0770 9bc47a55b65055f80512a769a9713ead 585 PANTHER PTHR24222 10 585 0.0 T 22-04-2016 YPO0770 9bc47a55b65055f80512a769a9713ead 585 Pfam PF00005 ABC transporter 350 502 9.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0770 9bc47a55b65055f80512a769a9713ead 585 PANTHER PTHR24222:SF29 10 585 0.0 T 22-04-2016 YPO0770 9bc47a55b65055f80512a769a9713ead 585 Gene3D G3DSA:1.20.1560.10 25 317 5.9E-35 T 22-04-2016 YPO0770 9bc47a55b65055f80512a769a9713ead 585 Pfam PF00664 ABC transporter transmembrane region 37 286 1.6E-14 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YPO0770 9bc47a55b65055f80512a769a9713ead 585 SUPERFAMILY SSF52540 326 572 1.52E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0770 9bc47a55b65055f80512a769a9713ead 585 Gene3D G3DSA:3.40.50.300 333 577 8.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0770 9bc47a55b65055f80512a769a9713ead 585 SMART SM00382 358 556 4.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1528 d515a03222bda5c65b69c76f3487f162 259 PRINTS PR01714 Ferric iron reductase signature 230 248 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPO1528 d515a03222bda5c65b69c76f3487f162 259 PRINTS PR01714 Ferric iron reductase signature 6 22 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPO1528 d515a03222bda5c65b69c76f3487f162 259 PRINTS PR01714 Ferric iron reductase signature 186 201 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPO1528 d515a03222bda5c65b69c76f3487f162 259 PRINTS PR01714 Ferric iron reductase signature 47 64 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPO1528 d515a03222bda5c65b69c76f3487f162 259 PRINTS PR01714 Ferric iron reductase signature 115 129 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPO1528 d515a03222bda5c65b69c76f3487f162 259 PRINTS PR01714 Ferric iron reductase signature 162 178 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPO1528 d515a03222bda5c65b69c76f3487f162 259 PRINTS PR01714 Ferric iron reductase signature 83 98 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPO1528 d515a03222bda5c65b69c76f3487f162 259 PRINTS PR01714 Ferric iron reductase signature 204 220 2.4E-45 T 22-04-2016 IPR008090 Ferric iron reductase YPO1528 d515a03222bda5c65b69c76f3487f162 259 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 230 250 1.5E-6 T 22-04-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 YPO1528 d515a03222bda5c65b69c76f3487f162 259 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 77 251 4.0E-66 T 22-04-2016 IPR008090 Ferric iron reductase YPO1528 d515a03222bda5c65b69c76f3487f162 259 Pfam PF06276 Ferric iron reductase FhuF-like transporter 83 226 7.3E-27 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 Pfam PF00771 FHIPEP family 31 681 6.1E-267 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 PIRSF PIRSF005419 15 692 1.3E-240 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 1.3E-277 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 PANTHER PTHR30161:SF1 2 692 0.0 T 22-04-2016 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 6.2E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 6.2E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 6.2E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 6.2E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 6.2E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 6.2E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 PANTHER PTHR30161 2 692 0.0 T 22-04-2016 YPO1791 a6f45aa41dc809b5eeddbc6efbcf8881 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 22-04-2016 IPR025505 FHIPEP conserved site YPO2949 2e59d7e4ef9a3c0dc92907faeac002c3 393 Pfam PF06812 ImpA, N-terminal, type VI secretion system 17 140 2.5E-29 T 22-04-2016 IPR010657 ImpA, N-terminal YPO2949 2e59d7e4ef9a3c0dc92907faeac002c3 393 PANTHER PTHR37951:SF2 311 390 1.2E-243 T 22-04-2016 YPO2949 2e59d7e4ef9a3c0dc92907faeac002c3 393 PANTHER PTHR37951:SF2 271 290 1.2E-243 T 22-04-2016 YPO2949 2e59d7e4ef9a3c0dc92907faeac002c3 393 PANTHER PTHR37951:SF2 3 253 1.2E-243 T 22-04-2016 YPO2949 2e59d7e4ef9a3c0dc92907faeac002c3 393 PANTHER PTHR37951 311 390 1.2E-243 T 22-04-2016 YPO2949 2e59d7e4ef9a3c0dc92907faeac002c3 393 PANTHER PTHR37951 271 290 1.2E-243 T 22-04-2016 YPO2949 2e59d7e4ef9a3c0dc92907faeac002c3 393 PANTHER PTHR37951 3 253 1.2E-243 T 22-04-2016 YPO1980 c7b011563bb2ccf3042873dca3ccb5f6 268 SUPERFAMILY SSF56281 28 265 6.16E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1980 c7b011563bb2ccf3042873dca3ccb5f6 268 PANTHER PTHR23200 10 268 6.0E-47 T 22-04-2016 YPO1980 c7b011563bb2ccf3042873dca3ccb5f6 268 Gene3D G3DSA:3.60.15.10 20 264 3.4E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1980 c7b011563bb2ccf3042873dca3ccb5f6 268 Pfam PF00753 Metallo-beta-lactamase superfamily 36 200 1.0E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1980 c7b011563bb2ccf3042873dca3ccb5f6 268 PANTHER PTHR23200:SF37 10 268 6.0E-47 T 22-04-2016 YPO2496 9bc621caa705deea3f87c5b97ac7a2eb 365 Gene3D G3DSA:3.40.718.10 8 353 7.6E-115 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO2496 9bc621caa705deea3f87c5b97ac7a2eb 365 PANTHER PTHR11835:SF37 1 363 4.5E-243 T 22-04-2016 YPO2496 9bc621caa705deea3f87c5b97ac7a2eb 365 SMART SM01329 10 359 9.6E-168 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO2496 9bc621caa705deea3f87c5b97ac7a2eb 365 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 6 362 1.8E-165 T 22-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 YPO2496 9bc621caa705deea3f87c5b97ac7a2eb 365 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 359 1.1E-81 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YPO2496 9bc621caa705deea3f87c5b97ac7a2eb 365 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPO2496 9bc621caa705deea3f87c5b97ac7a2eb 365 SUPERFAMILY SSF53659 3 363 7.1E-113 T 22-04-2016 YPO2496 9bc621caa705deea3f87c5b97ac7a2eb 365 PANTHER PTHR11835 1 363 4.5E-243 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 Gene3D G3DSA:3.90.230.10 179 433 2.7E-86 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 PANTHER PTHR10804:SF17 1 434 1.0E-166 T 22-04-2016 YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 SUPERFAMILY SSF53092 1 174 6.8E-52 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 SUPERFAMILY SSF55920 175 433 1.03E-85 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 1.6E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 371 383 1.6E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 4.9E-35 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 Pfam PF00557 Metallopeptidase family M24 182 412 3.8E-64 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 PANTHER PTHR10804 1 434 1.0E-166 T 22-04-2016 YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 SMART SM01011 1 136 8.1E-56 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 YPO0910 f90f4af1c80eae1c0903385399a43cd2 437 Gene3D G3DSA:3.40.350.10 2 178 7.4E-53 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPO0626 dc4314689004a71dd5784c147d52afa7 196 Pfam PF13309 HTH domain 136 177 3.8E-7 T 22-04-2016 YPO0626 dc4314689004a71dd5784c147d52afa7 196 PANTHER PTHR35568:SF1 1 186 3.2E-84 T 22-04-2016 YPO0626 dc4314689004a71dd5784c147d52afa7 196 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 1 100 1.0E-53 T 22-04-2016 IPR013559 YheO-like YPO0626 dc4314689004a71dd5784c147d52afa7 196 Pfam PF08348 YheO-like PAS domain 1 108 3.0E-37 T 22-04-2016 IPR013559 YheO-like YPO0626 dc4314689004a71dd5784c147d52afa7 196 PANTHER PTHR35568 1 186 3.2E-84 T 22-04-2016 YPO2461 b9da334ba29f050a52cd7a0f19491b92 339 SUPERFAMILY SSF51430 1 313 1.07E-92 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2461 b9da334ba29f050a52cd7a0f19491b92 339 PANTHER PTHR11732:SF273 1 339 6.4E-200 T 22-04-2016 YPO2461 b9da334ba29f050a52cd7a0f19491b92 339 Gene3D G3DSA:3.20.20.100 1 309 2.0E-92 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2461 b9da334ba29f050a52cd7a0f19491b92 339 Pfam PF00248 Aldo/keto reductase family 15 309 2.3E-67 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2461 b9da334ba29f050a52cd7a0f19491b92 339 PANTHER PTHR11732 1 339 6.4E-200 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPO1604 4d410033fc23bfb0fac37050149c70b3 341 Gene3D G3DSA:3.30.160.60 304 340 5.4E-19 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 YPO1604 4d410033fc23bfb0fac37050149c70b3 341 PANTHER PTHR30518 8 341 6.9E-101 T 22-04-2016 YPO1604 4d410033fc23bfb0fac37050149c70b3 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 337 7.3E-123 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like YPO1604 4d410033fc23bfb0fac37050149c70b3 341 PANTHER PTHR30518:SF2 8 341 6.9E-101 T 22-04-2016 YPO1604 4d410033fc23bfb0fac37050149c70b3 341 Pfam PF02618 YceG-like family 44 329 3.8E-83 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like YPO1604 4d410033fc23bfb0fac37050149c70b3 341 Gene3D G3DSA:3.30.160.60 72 110 2.7E-24 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 YPO1168 13bca3d0e760623a9990c77536d34b0b 673 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 494 3.1E-167 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 YPO1168 13bca3d0e760623a9990c77536d34b0b 673 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 495 1.1E-167 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 YPO1168 13bca3d0e760623a9990c77536d34b0b 673 PANTHER PTHR30047 1 669 0.0 T 22-04-2016 YPO1168 13bca3d0e760623a9990c77536d34b0b 673 PANTHER PTHR30047:SF6 1 669 0.0 T 22-04-2016 YPO1168 13bca3d0e760623a9990c77536d34b0b 673 ProSitePatterns PS01303 BCCT family of transporters signature. 311 320 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 YPO2127 2277b2a6a71d766647bdfc79fc85af51 183 Pfam PF13248 zinc-ribbon domain 67 90 5.5E-7 T 22-04-2016 YPO1985 6ddc5cfd0671d9b7c2bbf824efcd3bae 395 Gene3D G3DSA:3.40.50.2000 23 264 4.3E-12 T 22-04-2016 YPO1985 6ddc5cfd0671d9b7c2bbf824efcd3bae 395 SUPERFAMILY SSF53756 16 377 6.91E-55 T 22-04-2016 YPO1985 6ddc5cfd0671d9b7c2bbf824efcd3bae 395 Gene3D G3DSA:3.40.50.2000 265 381 1.2E-14 T 22-04-2016 YPO1985 6ddc5cfd0671d9b7c2bbf824efcd3bae 395 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 264 374 8.4E-6 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YPO1985 6ddc5cfd0671d9b7c2bbf824efcd3bae 395 PANTHER PTHR11926 216 256 4.1E-12 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 YPO1985 6ddc5cfd0671d9b7c2bbf824efcd3bae 395 PANTHER PTHR11926 9 194 4.1E-12 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 YPO1312 dc4572904abafe5b0b1eb40508e46d89 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1312 dc4572904abafe5b0b1eb40508e46d89 262 SUPERFAMILY SSF52540 5 229 5.32E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1312 dc4572904abafe5b0b1eb40508e46d89 262 SMART SM00382 30 215 8.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1312 dc4572904abafe5b0b1eb40508e46d89 262 Pfam PF00005 ABC transporter 28 165 3.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1312 dc4572904abafe5b0b1eb40508e46d89 262 PANTHER PTHR24220 6 243 1.2E-64 T 22-04-2016 YPO1312 dc4572904abafe5b0b1eb40508e46d89 262 Gene3D G3DSA:3.40.50.300 7 243 1.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3257 66ce5274422f3f7df31cf08e554fc165 262 Gene3D G3DSA:3.40.190.10 17 140 2.6E-36 T 22-04-2016 YPO3257 66ce5274422f3f7df31cf08e554fc165 262 PANTHER PTHR18966:SF191 24 251 1.3E-36 T 22-04-2016 YPO3257 66ce5274422f3f7df31cf08e554fc165 262 SMART SM00062 35 255 2.5E-40 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO3257 66ce5274422f3f7df31cf08e554fc165 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 253 1.4E-46 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO3257 66ce5274422f3f7df31cf08e554fc165 262 PANTHER PTHR18966 24 251 1.3E-36 T 22-04-2016 YPO3257 66ce5274422f3f7df31cf08e554fc165 262 Gene3D G3DSA:3.40.190.10 141 204 3.7E-12 T 22-04-2016 YPO3257 66ce5274422f3f7df31cf08e554fc165 262 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YPO3257 66ce5274422f3f7df31cf08e554fc165 262 SUPERFAMILY SSF53850 5 254 5.22E-53 T 22-04-2016 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 SUPERFAMILY SSF51998 154 677 2.56E-185 T 22-04-2016 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 Gene3D G3DSA:3.20.70.20 556 672 4.4E-55 T 22-04-2016 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 Gene3D G3DSA:3.20.70.20 86 276 4.4E-55 T 22-04-2016 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 Gene3D G3DSA:3.20.70.20 329 492 4.4E-55 T 22-04-2016 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 Pfam PF08343 Ribonucleotide reductase N-terminal 1 76 6.4E-30 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 PANTHER PTHR11573 7 679 6.8E-266 T 22-04-2016 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 78 150 1.1E-11 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 82 675 1.6E-159 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 1 693 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 SUPERFAMILY SSF48168 1 153 3.66E-59 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 545 567 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 230 249 1.5E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 405 428 1.5E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 361 372 1.5E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 444 466 1.5E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 472 495 1.5E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 556 583 1.5E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO2649 5a0344d42dcc0a8f444fa4ac3c6cc05a 693 Pfam PF02867 Ribonucleotide reductase, barrel domain 155 672 2.3E-141 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YPO1772 bb12d50d4f3aeba30d1bf2096b86c522 199 Pfam PF00293 NUDIX domain 39 152 1.3E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YPO1772 bb12d50d4f3aeba30d1bf2096b86c522 199 SUPERFAMILY SSF55811 27 194 6.91E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO1772 bb12d50d4f3aeba30d1bf2096b86c522 199 ProSitePatterns PS01293 Nudix CoA signature. 56 76 - T 22-04-2016 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 YPO1772 bb12d50d4f3aeba30d1bf2096b86c522 199 Gene3D G3DSA:3.90.79.10 36 196 2.5E-38 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YPO1772 bb12d50d4f3aeba30d1bf2096b86c522 199 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 4 199 53.074 T 22-04-2016 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 YPO1772 bb12d50d4f3aeba30d1bf2096b86c522 199 PANTHER PTHR12992 9 197 1.5E-58 T 22-04-2016 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 4.2E-96 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 Gene3D G3DSA:3.40.50.300 3 205 3.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 SUPERFAMILY SSF52540 8 205 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 PANTHER PTHR10285 1 213 2.8E-96 T 22-04-2016 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 42 53 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 8 25 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 87 102 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 143 153 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 179 192 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 PRINTS PR00988 Uridine kinase signature 157 168 4.1E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.293 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YPO1524 e6bba29fee2a35bf44b65ae7f0af004f 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 1.6E-43 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 YPO2514 ec6f27a4fa83100d8e7792bba6f57c29 240 SUPERFAMILY SSF52540 1 235 1.73E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2514 ec6f27a4fa83100d8e7792bba6f57c29 240 PANTHER PTHR24220:SF569 3 239 4.3E-158 T 22-04-2016 YPO2514 ec6f27a4fa83100d8e7792bba6f57c29 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2514 ec6f27a4fa83100d8e7792bba6f57c29 240 Gene3D G3DSA:3.40.50.300 1 237 6.5E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2514 ec6f27a4fa83100d8e7792bba6f57c29 240 PANTHER PTHR24220 3 239 4.3E-158 T 22-04-2016 YPO2514 ec6f27a4fa83100d8e7792bba6f57c29 240 SMART SM00382 26 213 8.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2514 ec6f27a4fa83100d8e7792bba6f57c29 240 Pfam PF00005 ABC transporter 17 165 8.0E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2514 ec6f27a4fa83100d8e7792bba6f57c29 240 PIRSF PIRSF039085 1 240 1.0E-109 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 PANTHER PTHR21109 1 71 2.6E-27 T 22-04-2016 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YPO0645 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO4000 81f7fca0c7730009df0ef4e6c1599eb5 326 PANTHER PTHR24220 5 320 1.3E-227 T 22-04-2016 YPO4000 81f7fca0c7730009df0ef4e6c1599eb5 326 SMART SM00382 32 231 4.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO4000 81f7fca0c7730009df0ef4e6c1599eb5 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO4000 81f7fca0c7730009df0ef4e6c1599eb5 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 3.1E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO4000 81f7fca0c7730009df0ef4e6c1599eb5 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 8.8E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO4000 81f7fca0c7730009df0ef4e6c1599eb5 326 SUPERFAMILY SSF52540 32 304 4.61E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4000 81f7fca0c7730009df0ef4e6c1599eb5 326 Gene3D G3DSA:3.40.50.300 2 255 5.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4000 81f7fca0c7730009df0ef4e6c1599eb5 326 PANTHER PTHR24220:SF576 5 320 1.3E-227 T 22-04-2016 YPO4000 81f7fca0c7730009df0ef4e6c1599eb5 326 Pfam PF00005 ABC transporter 24 181 1.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2953 2aaed266e1eb2e1ef218dda9dcb8f3f9 560 Pfam PF00691 OmpA family 441 539 7.4E-18 T 22-04-2016 IPR006665 OmpA-like domain YPO2953 2aaed266e1eb2e1ef218dda9dcb8f3f9 560 PRINTS PR01021 OMPA domain signature 474 489 5.6E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO2953 2aaed266e1eb2e1ef218dda9dcb8f3f9 560 PRINTS PR01021 OMPA domain signature 489 505 5.6E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YPO2953 2aaed266e1eb2e1ef218dda9dcb8f3f9 560 SUPERFAMILY SSF103088 440 547 2.09E-27 T 22-04-2016 IPR006665 OmpA-like domain YPO2953 2aaed266e1eb2e1ef218dda9dcb8f3f9 560 PANTHER PTHR30128 439 560 2.4E-46 T 22-04-2016 YPO2953 2aaed266e1eb2e1ef218dda9dcb8f3f9 560 Gene3D G3DSA:3.30.1330.60 441 547 3.0E-29 T 22-04-2016 IPR006665 OmpA-like domain YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 405 42.711 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 PANTHER PTHR22642 1 404 1.7E-160 T 22-04-2016 YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 SUPERFAMILY SSF51556 66 366 2.86E-86 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 Gene3D G3DSA:3.20.20.140 77 362 1.9E-37 T 22-04-2016 YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 PANTHER PTHR22642:SF1 1 404 1.7E-160 T 22-04-2016 YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 28 404 2.9E-170 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 Gene3D G3DSA:2.30.40.10 24 76 1.5E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 Pfam PF01979 Amidohydrolase family 64 402 1.1E-14 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 SUPERFAMILY SSF51338 367 404 1.68E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO1972 5dd76139a3c04c715fc64401c14f9d11 406 SUPERFAMILY SSF51338 6 66 1.68E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YPO3225 acc40e1a6bccb295fde929e959827058 152 Gene3D G3DSA:3.40.50.2020 1 145 4.7E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO3225 acc40e1a6bccb295fde929e959827058 152 PANTHER PTHR39563 2 152 6.9E-118 T 22-04-2016 YPO3225 acc40e1a6bccb295fde929e959827058 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.845 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 YPO3225 acc40e1a6bccb295fde929e959827058 152 Pfam PF00156 Phosphoribosyl transferase domain 11 145 1.6E-17 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPO3225 acc40e1a6bccb295fde929e959827058 152 SUPERFAMILY SSF53271 4 144 2.1E-31 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO1305 c7f23264fd8f73e76fe817ce188e64e5 837 PANTHER PTHR30451:SF9 1 837 0.0 T 22-04-2016 YPO1305 c7f23264fd8f73e76fe817ce188e64e5 837 SUPERFAMILY SSF141729 26 150 4.58E-28 T 22-04-2016 YPO1305 c7f23264fd8f73e76fe817ce188e64e5 837 Pfam PF00577 Outer membrane usher protein 190 746 1.3E-193 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1305 c7f23264fd8f73e76fe817ce188e64e5 837 Pfam PF13954 PapC N-terminal domain 28 173 2.8E-38 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YPO1305 c7f23264fd8f73e76fe817ce188e64e5 837 PANTHER PTHR30451 1 837 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YPO1305 c7f23264fd8f73e76fe817ce188e64e5 837 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 302 312 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YPO1305 c7f23264fd8f73e76fe817ce188e64e5 837 Pfam PF13953 PapC C-terminal domain 755 820 1.1E-24 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YPO2624 5617475800bc71c40f24777581194307 250 Gene3D G3DSA:3.40.50.10410 83 173 8.4E-32 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain YPO2624 5617475800bc71c40f24777581194307 250 Gene3D G3DSA:3.40.50.1000 174 247 2.0E-41 T 22-04-2016 IPR023214 HAD-like domain YPO2624 5617475800bc71c40f24777581194307 250 Gene3D G3DSA:3.40.50.1000 1 79 2.0E-41 T 22-04-2016 IPR023214 HAD-like domain YPO2624 5617475800bc71c40f24777581194307 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.3E-23 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPO2624 5617475800bc71c40f24777581194307 250 PANTHER PTHR19288 3 247 6.1E-168 T 22-04-2016 YPO2624 5617475800bc71c40f24777581194307 250 Pfam PF13242 HAD-hyrolase-like 174 246 1.8E-20 T 22-04-2016 YPO2624 5617475800bc71c40f24777581194307 250 SUPERFAMILY SSF56784 1 247 6.67E-64 T 22-04-2016 IPR023214 HAD-like domain YPO2624 5617475800bc71c40f24777581194307 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 4.6E-63 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPO2624 5617475800bc71c40f24777581194307 250 PANTHER PTHR19288:SF40 3 247 6.1E-168 T 22-04-2016 YPO3027 7c0a799586661845d41f86f6a7d1ede5 137 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 136 3.3E-40 T 22-04-2016 IPR016052 Bacteriophage 933W, L0136 YPO3027 7c0a799586661845d41f86f6a7d1ede5 137 Pfam PF04076 Bacterial OB fold (BOF) protein 30 135 2.0E-35 T 22-04-2016 IPR005220 Bacterial OB-fold YPO3027 7c0a799586661845d41f86f6a7d1ede5 137 SUPERFAMILY SSF101756 40 135 1.96E-35 T 22-04-2016 IPR005220 Bacterial OB-fold YPO3027 7c0a799586661845d41f86f6a7d1ede5 137 Gene3D G3DSA:2.40.50.200 38 137 2.4E-42 T 22-04-2016 IPR005220 Bacterial OB-fold YPO3027 7c0a799586661845d41f86f6a7d1ede5 137 PANTHER PTHR36571:SF1 2 137 6.1E-75 T 22-04-2016 YPO3027 7c0a799586661845d41f86f6a7d1ede5 137 PANTHER PTHR36571 2 137 6.1E-75 T 22-04-2016 YPO1310 91d20795ed103c54073de4821bc807dc 381 Pfam PF01497 Periplasmic binding protein 107 321 1.8E-23 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPO1310 91d20795ed103c54073de4821bc807dc 381 PANTHER PTHR30535 1 378 4.0E-99 T 22-04-2016 YPO1310 91d20795ed103c54073de4821bc807dc 381 PANTHER PTHR30535:SF5 1 378 4.0E-99 T 22-04-2016 YPO1310 91d20795ed103c54073de4821bc807dc 381 Gene3D G3DSA:3.40.50.1980 194 346 8.5E-28 T 22-04-2016 YPO1310 91d20795ed103c54073de4821bc807dc 381 SUPERFAMILY SSF53807 34 369 1.21E-54 T 22-04-2016 YPO1310 91d20795ed103c54073de4821bc807dc 381 Gene3D G3DSA:3.40.50.1980 67 188 1.5E-14 T 22-04-2016 YPO2468 ff53e2336a6b1d10502adbc1f814cf3b 328 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 15 320 1.4E-164 T 22-04-2016 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YPO2468 ff53e2336a6b1d10502adbc1f814cf3b 328 Pfam PF01867 CRISPR associated protein Cas1 29 314 5.4E-27 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 YPO2468 ff53e2336a6b1d10502adbc1f814cf3b 328 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 22 326 8.4E-79 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 YPO2468 ff53e2336a6b1d10502adbc1f814cf3b 328 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 6 328 9.095 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 YPO2770 03a4d516e88dfa76868e475c38bd703c 240 Hamap MF_02022 Cell division protein DedD [dedD]. 10 238 26.442 T 22-04-2016 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 YPO2770 03a4d516e88dfa76868e475c38bd703c 240 PANTHER PTHR38687:SF1 2 240 1.0E-71 T 22-04-2016 YPO2770 03a4d516e88dfa76868e475c38bd703c 240 Gene3D G3DSA:3.30.70.1070 159 234 2.4E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO2770 03a4d516e88dfa76868e475c38bd703c 240 Pfam PF05036 Sporulation related domain 161 233 1.7E-9 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO2770 03a4d516e88dfa76868e475c38bd703c 240 SUPERFAMILY SSF110997 161 234 1.7E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YPO2770 03a4d516e88dfa76868e475c38bd703c 240 PANTHER PTHR38687 2 240 1.0E-71 T 22-04-2016 YPO0237 8ffc9ae31aec777d1f366a4b667dbe23 66 Pfam PF03889 Domain of unknown function 9 45 1.2E-22 T 22-04-2016 IPR005589 Protein of unknown function DUF331 YPO2833 0353af32e1cfe51bfa06226216456b24 270 Pfam PF00005 ABC transporter 39 195 5.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2833 0353af32e1cfe51bfa06226216456b24 270 SUPERFAMILY SSF52540 21 256 1.45E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2833 0353af32e1cfe51bfa06226216456b24 270 PANTHER PTHR24220 25 269 6.0E-129 T 22-04-2016 YPO2833 0353af32e1cfe51bfa06226216456b24 270 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 24 270 2.0E-117 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 YPO2833 0353af32e1cfe51bfa06226216456b24 270 PANTHER PTHR24220:SF585 25 269 6.0E-129 T 22-04-2016 YPO2833 0353af32e1cfe51bfa06226216456b24 270 Gene3D G3DSA:3.40.50.300 23 264 2.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2833 0353af32e1cfe51bfa06226216456b24 270 SMART SM00382 48 242 3.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2833 0353af32e1cfe51bfa06226216456b24 270 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3900 1021dc1677af3d1df977afe9ee2bfb49 85 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 81 0.009 T 22-04-2016 YPO3900 1021dc1677af3d1df977afe9ee2bfb49 85 Pfam PF13710 ACT domain 13 73 1.5E-27 T 22-04-2016 YPO3900 1021dc1677af3d1df977afe9ee2bfb49 85 Gene3D G3DSA:3.30.70.260 1 77 7.0E-14 T 22-04-2016 YPO3900 1021dc1677af3d1df977afe9ee2bfb49 85 SUPERFAMILY SSF55021 3 76 2.25E-13 T 22-04-2016 YPO0812 96c48515e6a28272d4c258dd1296c43c 180 Gene3D G3DSA:3.55.40.10 38 172 7.3E-8 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 YPO0812 96c48515e6a28272d4c258dd1296c43c 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 21 6.7E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO0812 96c48515e6a28272d4c258dd1296c43c 180 PRINTS PR00885 Bacterial general secretion pathway protein H signature 139 154 7.3E-7 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YPO0812 96c48515e6a28272d4c258dd1296c43c 180 PRINTS PR00885 Bacterial general secretion pathway protein H signature 3 17 7.3E-7 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YPO0812 96c48515e6a28272d4c258dd1296c43c 180 PRINTS PR00885 Bacterial general secretion pathway protein H signature 18 32 7.3E-7 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YPO2149 1a077a9e2208c2bb84bd841cdad6cd2b 289 PIRSF PIRSF006232 2 288 1.2E-90 T 22-04-2016 IPR012093 Pirin YPO2149 1a077a9e2208c2bb84bd841cdad6cd2b 289 Gene3D G3DSA:2.60.120.10 4 257 7.0E-82 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO2149 1a077a9e2208c2bb84bd841cdad6cd2b 289 Pfam PF02678 Pirin 20 127 2.7E-34 T 22-04-2016 IPR003829 Pirin, N-terminal domain YPO2149 1a077a9e2208c2bb84bd841cdad6cd2b 289 Pfam PF05726 Pirin C-terminal cupin domain 182 284 3.7E-27 T 22-04-2016 IPR008778 Pirin, C-terminal domain YPO2149 1a077a9e2208c2bb84bd841cdad6cd2b 289 PANTHER PTHR13903 1 288 2.7E-191 T 22-04-2016 IPR012093 Pirin YPO2149 1a077a9e2208c2bb84bd841cdad6cd2b 289 SUPERFAMILY SSF51182 4 286 4.16E-85 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO2149 1a077a9e2208c2bb84bd841cdad6cd2b 289 PANTHER PTHR13903:SF12 1 288 2.7E-191 T 22-04-2016 YPO1848 0958ae21fdd1393d21e0753ff05a5911 253 Gene3D G3DSA:3.40.50.300 3 245 2.7E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1848 0958ae21fdd1393d21e0753ff05a5911 253 PIRSF PIRSF039085 1 249 7.8E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPO1848 0958ae21fdd1393d21e0753ff05a5911 253 SUPERFAMILY SSF52540 4 243 3.17E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1848 0958ae21fdd1393d21e0753ff05a5911 253 Pfam PF00005 ABC transporter 19 173 5.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1848 0958ae21fdd1393d21e0753ff05a5911 253 PANTHER PTHR24220:SF327 5 252 1.1E-147 T 22-04-2016 YPO1848 0958ae21fdd1393d21e0753ff05a5911 253 PANTHER PTHR24220 5 252 1.1E-147 T 22-04-2016 YPO1848 0958ae21fdd1393d21e0753ff05a5911 253 SMART SM00382 28 221 6.7E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1848 0958ae21fdd1393d21e0753ff05a5911 253 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3385 48b2ba6757e228c31baabf6b818de659 280 Gene3D G3DSA:3.40.50.1980 28 146 1.9E-33 T 22-04-2016 YPO3385 48b2ba6757e228c31baabf6b818de659 280 Gene3D G3DSA:3.40.50.1980 149 269 5.3E-31 T 22-04-2016 YPO3385 48b2ba6757e228c31baabf6b818de659 280 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 8 273 52.773 T 22-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 YPO3385 48b2ba6757e228c31baabf6b818de659 280 Pfam PF01497 Periplasmic binding protein 31 225 8.1E-28 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPO3385 48b2ba6757e228c31baabf6b818de659 280 PANTHER PTHR30535 25 269 4.5E-54 T 22-04-2016 YPO3385 48b2ba6757e228c31baabf6b818de659 280 SUPERFAMILY SSF53807 28 269 1.02E-55 T 22-04-2016 YPO1126 2d2bbe4a699766353963c618e1a4328f 269 PANTHER PTHR26312:SF74 160 266 3.4E-42 T 22-04-2016 YPO1126 2d2bbe4a699766353963c618e1a4328f 269 Pfam PF13525 Outer membrane lipoprotein 155 268 1.0E-9 T 22-04-2016 YPO1126 2d2bbe4a699766353963c618e1a4328f 269 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 149 266 5.4E-44 T 22-04-2016 IPR014162 Tol-Pal system, YbgF YPO1126 2d2bbe4a699766353963c618e1a4328f 269 SUPERFAMILY SSF48452 158 262 1.01E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1126 2d2bbe4a699766353963c618e1a4328f 269 PANTHER PTHR26312 160 266 3.4E-42 T 22-04-2016 YPO1126 2d2bbe4a699766353963c618e1a4328f 269 Pfam PF16331 TolA binding protein trimerisation 37 111 1.4E-23 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 YPO1126 2d2bbe4a699766353963c618e1a4328f 269 Gene3D G3DSA:1.25.40.10 158 257 1.4E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 PANTHER PTHR18968:SF116 2 575 0.0 T 22-04-2016 YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 546 1.7E-49 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 SUPERFAMILY SSF52467 188 362 3.44E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 570 9.0E-278 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 9.7E-46 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 4.3E-60 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 Gene3D G3DSA:3.40.50.970 357 559 1.3E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 Gene3D G3DSA:3.40.50.1220 189 356 8.9E-66 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 Gene3D G3DSA:3.40.50.970 2 178 4.4E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 SUPERFAMILY SSF52518 2 180 1.94E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 SUPERFAMILY SSF52518 368 572 5.18E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YPO0539 cfef62c0ce81c9a0114981dd07a6ad96 575 PANTHER PTHR18968 2 575 0.0 T 22-04-2016 YPO2472 956a3d2816c465b9a814c0fe15653629 371 SUPERFAMILY SSF56925 306 371 3.14E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2472 956a3d2816c465b9a814c0fe15653629 371 SUPERFAMILY SSF56925 169 273 3.14E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2460 1d8d40d614e3488fb09fdc70cb24f0af 167 Gene3D G3DSA:3.30.230.60 2 164 7.3E-55 T 22-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 YPO2460 1d8d40d614e3488fb09fdc70cb24f0af 167 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 5 162 5.1E-55 T 22-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 YPO2460 1d8d40d614e3488fb09fdc70cb24f0af 167 SUPERFAMILY SSF54211 1 164 4.02E-56 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YPO2460 1d8d40d614e3488fb09fdc70cb24f0af 167 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 3 156 3.6E-42 T 22-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 YPO3267 26394d610b0023b07145eb9ae74686be 390 Gene3D G3DSA:2.40.50.100 60 94 1.7E-20 T 22-04-2016 YPO3267 26394d610b0023b07145eb9ae74686be 390 Gene3D G3DSA:2.40.50.100 215 248 1.7E-20 T 22-04-2016 YPO3267 26394d610b0023b07145eb9ae74686be 390 PANTHER PTHR30386 1 376 8.4E-208 T 22-04-2016 YPO3267 26394d610b0023b07145eb9ae74686be 390 SUPERFAMILY SSF111369 59 113 1.57E-6 T 22-04-2016 YPO3267 26394d610b0023b07145eb9ae74686be 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 1.1E-135 T 22-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 YPO3267 26394d610b0023b07145eb9ae74686be 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 3.0E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO3267 26394d610b0023b07145eb9ae74686be 390 PANTHER PTHR30386:SF6 1 376 8.4E-208 T 22-04-2016 YPO3267 26394d610b0023b07145eb9ae74686be 390 SUPERFAMILY SSF111369 194 269 1.7E-9 T 22-04-2016 YPO3267 26394d610b0023b07145eb9ae74686be 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 346 4.3E-15 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO2891 2b129365217a3a463907e3fcce90b59a 111 Gene3D G3DSA:3.10.20.30 5 108 2.7E-35 T 22-04-2016 IPR012675 Beta-grasp domain YPO2891 2b129365217a3a463907e3fcce90b59a 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 92 3.5E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO2891 2b129365217a3a463907e3fcce90b59a 111 PANTHER PTHR23426 7 110 2.2E-43 T 22-04-2016 YPO2891 2b129365217a3a463907e3fcce90b59a 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 YPO2891 2b129365217a3a463907e3fcce90b59a 111 SUPERFAMILY SSF54292 4 109 7.27E-35 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO2891 2b129365217a3a463907e3fcce90b59a 111 PRINTS PR00355 Adrenodoxin signature 83 91 5.4E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 YPO2891 2b129365217a3a463907e3fcce90b59a 111 PRINTS PR00355 Adrenodoxin signature 42 52 5.4E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 YPO2891 2b129365217a3a463907e3fcce90b59a 111 PRINTS PR00355 Adrenodoxin signature 60 74 5.4E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 YPO2891 2b129365217a3a463907e3fcce90b59a 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 9.2E-62 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 YPO1640 5de091998967c2c12b1c63b0fa04fdb5 208 PANTHER PTHR21600:SF23 150 207 1.4E-99 T 22-04-2016 YPO1640 5de091998967c2c12b1c63b0fa04fdb5 208 PANTHER PTHR21600:SF23 1 132 1.4E-99 T 22-04-2016 YPO1640 5de091998967c2c12b1c63b0fa04fdb5 208 Pfam PF00849 RNA pseudouridylate synthase 60 176 7.6E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1640 5de091998967c2c12b1c63b0fa04fdb5 208 PANTHER PTHR21600 150 207 1.4E-99 T 22-04-2016 YPO1640 5de091998967c2c12b1c63b0fa04fdb5 208 PANTHER PTHR21600 1 132 1.4E-99 T 22-04-2016 YPO1640 5de091998967c2c12b1c63b0fa04fdb5 208 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 35 206 6.8E-58 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPO1640 5de091998967c2c12b1c63b0fa04fdb5 208 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 66 80 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YPO1640 5de091998967c2c12b1c63b0fa04fdb5 208 SUPERFAMILY SSF55120 29 206 1.6E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 49 665 9.0E-278 T 22-04-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 PANTHER PTHR34216 462 647 0.0 T 22-04-2016 YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 PANTHER PTHR34216 1 308 0.0 T 22-04-2016 YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 318 645 4.4E-148 T 22-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 Pfam PF01522 Polysaccharide deacetylase 103 270 6.3E-31 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 SUPERFAMILY SSF88713 66 196 2.25E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 SUPERFAMILY SSF88713 224 290 2.25E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 Gene3D G3DSA:3.20.20.370 77 270 1.1E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 Gene3D G3DSA:3.20.20.370 423 489 1.1E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 PANTHER PTHR34216:SF2 462 647 0.0 T 22-04-2016 YPO1952 56f721398bfd8e2a21b65e6dc00fc7d6 673 PANTHER PTHR34216:SF2 1 308 0.0 T 22-04-2016 YPO3172 92a5675e64e2f773b8f1be1b1c4863e0 196 PANTHER PTHR11019:SF4 1 194 2.2E-75 T 22-04-2016 YPO3172 92a5675e64e2f773b8f1be1b1c4863e0 196 SUPERFAMILY SSF52317 5 189 8.46E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO3172 92a5675e64e2f773b8f1be1b1c4863e0 196 Gene3D G3DSA:3.40.50.880 4 189 1.2E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YPO3172 92a5675e64e2f773b8f1be1b1c4863e0 196 Pfam PF01965 DJ-1/PfpI family 4 169 2.4E-45 T 22-04-2016 IPR002818 DJ-1/PfpI YPO3172 92a5675e64e2f773b8f1be1b1c4863e0 196 PANTHER PTHR11019 1 194 2.2E-75 T 22-04-2016 YPO3172 92a5675e64e2f773b8f1be1b1c4863e0 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 182 2.6E-65 T 22-04-2016 IPR006287 DJ-1 YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 PANTHER PTHR33705 1 84 8.4E-40 T 22-04-2016 YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 9.7E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.0E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 PANTHER PTHR33705:SF1 1 84 8.4E-40 T 22-04-2016 YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 Gene3D G3DSA:3.30.1340.10 1 83 9.7E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 SUPERFAMILY SSF55594 1 82 7.59E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.1E-19 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.1E-19 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO2993 90698f324e7b2f882bc5dfbfdbc4a362 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.1E-19 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YPO0683 435e4d8f94fc7cf0a0ebd4395866feb5 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 1.3E-29 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 YPO0683 435e4d8f94fc7cf0a0ebd4395866feb5 143 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 1.7E-64 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 YPO0683 435e4d8f94fc7cf0a0ebd4395866feb5 143 PANTHER PTHR30558:SF9 11 143 5.6E-86 T 22-04-2016 YPO0683 435e4d8f94fc7cf0a0ebd4395866feb5 143 PANTHER PTHR30558 11 143 5.6E-86 T 22-04-2016 YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 PANTHER PTHR11654:SF99 5 496 1.2E-250 T 22-04-2016 YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 490 51.957 T 22-04-2016 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Gene3D G3DSA:1.20.1250.20 273 482 6.5E-8 T 22-04-2016 YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Gene3D G3DSA:1.20.1250.20 21 203 2.4E-18 T 22-04-2016 YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 PANTHER PTHR11654 5 496 1.2E-250 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 Pfam PF00854 POT family 89 445 6.7E-88 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 486 1.1E-137 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 SUPERFAMILY SSF103473 259 488 4.71E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 SUPERFAMILY SSF103473 18 212 4.71E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2361 6d8fa0c01f28d8a9b9ffdd1f014c4bcc 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YPO0178 7f10256aa05658e9aad314bec0fe9476 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPO0178 7f10256aa05658e9aad314bec0fe9476 289 SUPERFAMILY SSF52540 4 286 1.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0178 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPO0178 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPO0178 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPO0178 7f10256aa05658e9aad314bec0fe9476 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YPO0178 7f10256aa05658e9aad314bec0fe9476 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.5E-73 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 YPO0178 7f10256aa05658e9aad314bec0fe9476 289 PANTHER PTHR10285:SF72 1 275 7.9E-157 T 22-04-2016 YPO0178 7f10256aa05658e9aad314bec0fe9476 289 Gene3D G3DSA:3.40.50.300 1 288 1.9E-128 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0178 7f10256aa05658e9aad314bec0fe9476 289 PANTHER PTHR10285 1 275 7.9E-157 T 22-04-2016 YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 PANTHER PTHR18895 1 275 8.0E-117 T 22-04-2016 YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 SUPERFAMILY SSF53335 3 272 7.5E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 274 5.0E-88 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 274 46.086 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 PANTHER PTHR18895:SF64 1 275 8.0E-117 T 22-04-2016 YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 270 1.5E-89 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 Pfam PF13847 Methyltransferase domain 111 251 1.8E-21 T 22-04-2016 IPR025714 Methyltransferase domain YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 Gene3D G3DSA:3.40.50.150 87 274 6.2E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2018 6d0daedd2c1d7a5a1c33b2a098a2d906 276 Gene3D G3DSA:1.10.8.10 1 84 2.7E-27 T 22-04-2016 YPO1494 f299cb678d2cb25408a1ed49dd147f48 255 Gene3D G3DSA:3.40.50.720 4 248 1.4E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1494 f299cb678d2cb25408a1ed49dd147f48 255 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 5.0E-123 T 22-04-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1494 f299cb678d2cb25408a1ed49dd147f48 255 Pfam PF00899 ThiF family 12 244 4.2E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPO1494 f299cb678d2cb25408a1ed49dd147f48 255 PANTHER PTHR10953 3 247 7.1E-89 T 22-04-2016 YPO1494 f299cb678d2cb25408a1ed49dd147f48 255 SUPERFAMILY SSF69572 3 247 3.92E-87 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPO1404 4dfb3a8b558329f8efb2daeebc6f291b 233 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 1 231 52.24 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 YPO1404 4dfb3a8b558329f8efb2daeebc6f291b 233 Pfam PF04288 MukE-like family 1 217 2.1E-126 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 YPO3923 067651b413db9bb4161fc3c475adf263 830 Gene3D G3DSA:2.170.130.10 66 180 4.7E-37 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO3923 067651b413db9bb4161fc3c475adf263 830 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 176 6.9E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO3923 067651b413db9bb4161fc3c475adf263 830 PANTHER PTHR32552 1 246 0.0 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 PANTHER PTHR32552 266 470 0.0 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 PANTHER PTHR32552 503 674 0.0 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 PANTHER PTHR32552 705 830 0.0 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 PANTHER PTHR32552:SF20 1 246 0.0 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 PANTHER PTHR32552:SF20 266 470 0.0 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 PANTHER PTHR32552:SF20 503 674 0.0 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 PANTHER PTHR32552:SF20 705 830 0.0 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 Pfam PF00593 TonB dependent receptor 521 829 2.8E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO3923 067651b413db9bb4161fc3c475adf263 830 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 54 830 5.0E-167 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YPO3923 067651b413db9bb4161fc3c475adf263 830 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 61 830 2.0E-120 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YPO3923 067651b413db9bb4161fc3c475adf263 830 Gene3D G3DSA:2.40.170.20 181 463 5.3E-68 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO3923 067651b413db9bb4161fc3c475adf263 830 Gene3D G3DSA:2.40.170.20 514 830 5.3E-68 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO3923 067651b413db9bb4161fc3c475adf263 830 SUPERFAMILY SSF56935 514 671 7.06E-84 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 SUPERFAMILY SSF56935 711 830 7.06E-84 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 SUPERFAMILY SSF56935 67 238 7.06E-84 T 22-04-2016 YPO3923 067651b413db9bb4161fc3c475adf263 830 SUPERFAMILY SSF56935 267 476 7.06E-84 T 22-04-2016 YPO1371 0c94b5e4dcb278b8f0ce4b68841cab31 236 PANTHER PTHR30098 1 229 5.0E-91 T 22-04-2016 YPO1371 0c94b5e4dcb278b8f0ce4b68841cab31 236 SUPERFAMILY SSF55729 3 229 1.17E-94 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1371 0c94b5e4dcb278b8f0ce4b68841cab31 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 97.06 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 YPO1371 0c94b5e4dcb278b8f0ce4b68841cab31 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 214 1.6E-76 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 YPO1371 0c94b5e4dcb278b8f0ce4b68841cab31 236 PANTHER PTHR30098:SF2 1 229 5.0E-91 T 22-04-2016 YPO1371 0c94b5e4dcb278b8f0ce4b68841cab31 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 203 1.7E-73 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 YPO2345 f9e9eae116cee3014d7b8d3d446688a6 148 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 15 147 1.1E-54 T 22-04-2016 IPR011979 Conserved hypothetical protein CHP02293 YPO2345 f9e9eae116cee3014d7b8d3d446688a6 148 Pfam PF09722 Protein of unknown function (DUF2384) 94 145 5.6E-14 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 YPO1288 4804f124b5a943c842d2c957f333a595 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 228 244 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO1288 4804f124b5a943c842d2c957f333a595 321 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO1288 4804f124b5a943c842d2c957f333a595 321 Gene3D G3DSA:3.40.50.720 113 290 3.8E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1288 4804f124b5a943c842d2c957f333a595 321 SUPERFAMILY SSF52283 5 137 2.84E-26 T 22-04-2016 YPO1288 4804f124b5a943c842d2c957f333a595 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 289 4.5E-56 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YPO1288 4804f124b5a943c842d2c957f333a595 321 PANTHER PTHR10996 39 319 7.6E-99 T 22-04-2016 YPO1288 4804f124b5a943c842d2c957f333a595 321 Gene3D G3DSA:3.40.50.720 6 112 1.3E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1288 4804f124b5a943c842d2c957f333a595 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 31 316 3.1E-22 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YPO1288 4804f124b5a943c842d2c957f333a595 321 SUPERFAMILY SSF51735 106 289 7.9E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0767 6136ebcd92185518179bdcd6c5b525b3 447 PANTHER PTHR30354 1 447 0.0 T 22-04-2016 YPO0767 6136ebcd92185518179bdcd6c5b525b3 447 PANTHER PTHR30354:SF5 1 447 0.0 T 22-04-2016 YPO0767 6136ebcd92185518179bdcd6c5b525b3 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 447 6.0E-171 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPO0767 6136ebcd92185518179bdcd6c5b525b3 447 Pfam PF02447 GntP family permease 4 445 4.9E-158 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPO0767 6136ebcd92185518179bdcd6c5b525b3 447 PIRSF PIRSF002746 1 447 1.5E-141 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPO1991 b0b528400952d478e0dba821f8e5ba23 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 1.5E-23 T 22-04-2016 IPR022133 Ribose-5-phosphate isomerase, C-terminal YPO1991 b0b528400952d478e0dba821f8e5ba23 212 Pfam PF02502 Ribose/Galactose Isomerase 3 142 4.1E-29 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO1991 b0b528400952d478e0dba821f8e5ba23 212 PANTHER PTHR30345:SF0 1 212 3.1E-38 T 22-04-2016 YPO1991 b0b528400952d478e0dba821f8e5ba23 212 Gene3D G3DSA:3.40.1400.10 1 211 1.7E-94 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO1991 b0b528400952d478e0dba821f8e5ba23 212 SUPERFAMILY SSF89623 1 161 2.62E-35 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO1991 b0b528400952d478e0dba821f8e5ba23 212 PANTHER PTHR30345 1 212 3.1E-38 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YPO3075 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 6.8E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPO3075 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 7.7E-104 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 YPO3075 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 Gene3D G3DSA:3.60.21.10 1 125 3.9E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO3075 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 Gene3D G3DSA:3.60.21.10 173 204 3.9E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO3075 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 PANTHER PTHR34990 1 240 1.7E-138 T 22-04-2016 YPO3075 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 PANTHER PTHR34990:SF1 1 240 1.7E-138 T 22-04-2016 YPO3075 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 127.354 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 YPO3075 b12d8bb58a1905cb5d5d3107cdb1d9b4 240 SUPERFAMILY SSF56300 3 238 2.71E-36 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO2860 d8e39ec8a31393a158d278e7c0f4ba01 159 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 12 157 1.2E-63 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPO0057 4e985d9baeabeb8ee9d172dbdb8783c6 354 PANTHER PTHR30160 1 353 9.1E-122 T 22-04-2016 YPO0057 4e985d9baeabeb8ee9d172dbdb8783c6 354 PANTHER PTHR30160:SF7 1 353 9.1E-122 T 22-04-2016 YPO0057 4e985d9baeabeb8ee9d172dbdb8783c6 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 9.8E-81 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YPO0057 4e985d9baeabeb8ee9d172dbdb8783c6 354 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 5.2E-162 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 YPO0057 4e985d9baeabeb8ee9d172dbdb8783c6 354 Gene3D G3DSA:3.40.50.2000 165 344 1.3E-54 T 22-04-2016 YPO0057 4e985d9baeabeb8ee9d172dbdb8783c6 354 SUPERFAMILY SSF53756 1 345 2.09E-100 T 22-04-2016 YPO0057 4e985d9baeabeb8ee9d172dbdb8783c6 354 Gene3D G3DSA:3.40.50.2000 1 141 1.4E-56 T 22-04-2016 YPO2782 b531f12012cd28744158f453e97542d4 418 PANTHER PTHR33843:SF4 1 418 8.2E-253 T 22-04-2016 YPO2782 b531f12012cd28744158f453e97542d4 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 2.9E-149 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 YPO2782 b531f12012cd28744158f453e97542d4 418 PANTHER PTHR33843 1 418 8.2E-253 T 22-04-2016 YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 PIRSF PIRSF000141 1 423 4.8E-176 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 417 3.5E-182 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 Gene3D G3DSA:3.50.50.60 1 62 8.1E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 Gene3D G3DSA:3.50.50.60 254 419 8.1E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 Gene3D G3DSA:3.50.50.60 121 122 8.1E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 Pfam PF00890 FAD binding domain 4 404 7.1E-63 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 420 52.115 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 SUPERFAMILY SSF51905 254 418 1.33E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 SUPERFAMILY SSF51905 133 200 1.33E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3825 e66b8c371eabd87c1026d0288a753ad9 424 SUPERFAMILY SSF51905 1 35 1.33E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0884 a5889521d781db1022dbc1a5d4555cc1 86 SUPERFAMILY SSF143011 1 81 4.05E-16 T 22-04-2016 YPO0884 a5889521d781db1022dbc1a5d4555cc1 86 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 72 1.3E-6 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YPO0884 a5889521d781db1022dbc1a5d4555cc1 86 PANTHER PTHR38813 1 86 1.1E-70 T 22-04-2016 YPO0884 a5889521d781db1022dbc1a5d4555cc1 86 PANTHER PTHR38813:SF3 1 86 1.1E-70 T 22-04-2016 YPO2155 6f7133561740e213e9fda12890c959b7 256 PANTHER PTHR38776 2 255 1.3E-96 T 22-04-2016 YPO2155 6f7133561740e213e9fda12890c959b7 256 Pfam PF06629 MltA-interacting protein MipA 35 255 1.5E-55 T 22-04-2016 IPR010583 MltA-interacting MipA YPO2155 6f7133561740e213e9fda12890c959b7 256 Gene3D G3DSA:2.40.160.20 162 236 2.2E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO2394 cac3aea8b2bd48e22554d4669b300f51 78 PIRSF PIRSF002855 1 78 8.0E-29 T 22-04-2016 IPR016367 Murein-lipoprotein YPO2394 cac3aea8b2bd48e22554d4669b300f51 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 9.6E-25 T 22-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 YPO2394 cac3aea8b2bd48e22554d4669b300f51 78 Gene3D G3DSA:1.20.5.190 22 73 2.0E-23 T 22-04-2016 YPO2394 cac3aea8b2bd48e22554d4669b300f51 78 PANTHER PTHR38763 1 78 1.0E-28 T 22-04-2016 YPO2394 cac3aea8b2bd48e22554d4669b300f51 78 SUPERFAMILY SSF58042 24 73 2.09E-22 T 22-04-2016 YPO3626 c1d0abb0670049faf557e9e7af349ee0 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 248 1.3E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3626 c1d0abb0670049faf557e9e7af349ee0 265 PANTHER PTHR30151:SF22 1 264 1.8E-202 T 22-04-2016 YPO3626 c1d0abb0670049faf557e9e7af349ee0 265 SUPERFAMILY SSF161098 57 238 2.22E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3626 c1d0abb0670049faf557e9e7af349ee0 265 Gene3D G3DSA:1.10.3720.10 55 250 1.2E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3626 c1d0abb0670049faf557e9e7af349ee0 265 PANTHER PTHR30151 1 264 1.8E-202 T 22-04-2016 YPO3550 e11a2f2380eca2e3307456be43b03d0b 196 Pfam PF13580 SIS domain 9 144 3.8E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO3550 e11a2f2380eca2e3307456be43b03d0b 196 PANTHER PTHR30390:SF5 1 196 3.4E-133 T 22-04-2016 YPO3550 e11a2f2380eca2e3307456be43b03d0b 196 SUPERFAMILY SSF53697 3 191 4.45E-51 T 22-04-2016 YPO3550 e11a2f2380eca2e3307456be43b03d0b 196 Gene3D G3DSA:3.40.50.10490 3 191 1.3E-54 T 22-04-2016 YPO3550 e11a2f2380eca2e3307456be43b03d0b 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 59.319 T 22-04-2016 IPR023070 DnaA initiator-associating protein YPO3550 e11a2f2380eca2e3307456be43b03d0b 196 PANTHER PTHR30390 1 196 3.4E-133 T 22-04-2016 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 PIRSF PIRSF000538 1 456 2.1E-46 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 248 430 4.2E-26 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 Gene3D G3DSA:3.30.420.40 244 451 3.3E-16 T 22-04-2016 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 2 455 6.6E-243 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 SUPERFAMILY SSF53067 243 461 5.67E-34 T 22-04-2016 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 PANTHER PTHR10196 1 474 4.8E-244 T 22-04-2016 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 SUPERFAMILY SSF53067 2 240 1.1E-51 T 22-04-2016 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 Gene3D G3DSA:3.30.420.40 2 237 7.8E-35 T 22-04-2016 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 Hamap MF_01535 Rhamnulokinase [rhaB]. 1 478 54.744 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 PANTHER PTHR10196:SF6 1 474 4.8E-244 T 22-04-2016 YPO0330 960b445f79adaadae6e37ae9fd9f8cb5 485 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 238 5.2E-36 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPO0949 300366d018c49afecbec9de6cfc7c807 308 Pfam PF04960 Glutaminase 24 308 8.4E-116 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPO0949 300366d018c49afecbec9de6cfc7c807 308 PANTHER PTHR12544 7 308 2.7E-172 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPO0949 300366d018c49afecbec9de6cfc7c807 308 SUPERFAMILY SSF56601 8 308 1.09E-116 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0949 300366d018c49afecbec9de6cfc7c807 308 Gene3D G3DSA:3.40.710.10 8 308 4.4E-127 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO0949 300366d018c49afecbec9de6cfc7c807 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 47.123 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPO0949 300366d018c49afecbec9de6cfc7c807 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 6.8E-134 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPO1779 cb26653d1499685d410abb400cc1e960 141 Pfam PF13995 YebF-like protein 32 119 5.7E-39 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein YPO1779 cb26653d1499685d410abb400cc1e960 141 Hamap MF_01435 Protein YebF [yebF]. 6 122 38.535 T 22-04-2016 IPR020236 Uncharacterised protein family YebF YPO1779 cb26653d1499685d410abb400cc1e960 141 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 30 119 2.0E-47 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein YOP2083 4907a6b466f6bf963ff57889c263056e 412 Pfam PF00589 Phage integrase family 188 380 4.6E-23 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YOP2083 4907a6b466f6bf963ff57889c263056e 412 Gene3D G3DSA:1.10.150.130 66 180 4.4E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YOP2083 4907a6b466f6bf963ff57889c263056e 412 PANTHER PTHR30349 141 411 1.6E-148 T 22-04-2016 YOP2083 4907a6b466f6bf963ff57889c263056e 412 PANTHER PTHR30349 1 125 1.6E-148 T 22-04-2016 YOP2083 4907a6b466f6bf963ff57889c263056e 412 Gene3D G3DSA:1.10.443.10 186 392 1.2E-42 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YOP2083 4907a6b466f6bf963ff57889c263056e 412 SUPERFAMILY SSF56349 65 387 6.39E-60 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YOP2083 4907a6b466f6bf963ff57889c263056e 412 Pfam PF12167 Domain of unknown function (DUF3596) 7 53 1.5E-14 T 22-04-2016 IPR022000 Domain of unknown function (DUF3596) YOP2083 4907a6b466f6bf963ff57889c263056e 412 PANTHER PTHR30349:SF36 141 411 1.6E-148 T 22-04-2016 YOP2083 4907a6b466f6bf963ff57889c263056e 412 PANTHER PTHR30349:SF36 1 125 1.6E-148 T 22-04-2016 YPO0511a 52632b49181d264d90dc896f52cbe840 121 Pfam PF13665 Domain of unknown function (DUF4150) 18 106 1.7E-12 T 22-04-2016 IPR025425 Domain of unknown function DUF4150 YPO2541 c30b1dfab3c434c887134943e35e1911 155 PANTHER PTHR34986 2 155 2.9E-98 T 22-04-2016 YPO2541 c30b1dfab3c434c887134943e35e1911 155 Pfam PF04074 Domain of unknown function (DUF386) 1 150 1.4E-38 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPO2541 c30b1dfab3c434c887134943e35e1911 155 Gene3D G3DSA:2.60.120.370 1 153 4.2E-43 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPO2541 c30b1dfab3c434c887134943e35e1911 155 SUPERFAMILY SSF51197 1 154 3.84E-41 T 22-04-2016 YPO2541 c30b1dfab3c434c887134943e35e1911 155 PANTHER PTHR34986:SF3 2 155 2.9E-98 T 22-04-2016 YPO2541 c30b1dfab3c434c887134943e35e1911 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 154 6.8E-36 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YPO1221 129efe2f7af4ae59eb266e662ea5ceb5 384 Gene3D G3DSA:1.20.1250.20 22 184 1.2E-16 T 22-04-2016 YPO1221 129efe2f7af4ae59eb266e662ea5ceb5 384 PANTHER PTHR23514:SF13 16 384 2.5E-153 T 22-04-2016 YPO1221 129efe2f7af4ae59eb266e662ea5ceb5 384 PANTHER PTHR23514 16 384 2.5E-153 T 22-04-2016 YPO1221 129efe2f7af4ae59eb266e662ea5ceb5 384 SUPERFAMILY SSF103473 22 378 4.19E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1221 129efe2f7af4ae59eb266e662ea5ceb5 384 Gene3D G3DSA:1.20.1250.20 210 376 2.4E-10 T 22-04-2016 YPO1221 129efe2f7af4ae59eb266e662ea5ceb5 384 Pfam PF07690 Major Facilitator Superfamily 22 324 6.7E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 SUPERFAMILY SSF46934 4 55 4.68E-18 T 22-04-2016 IPR009060 UBA-like GO:0005515 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 PANTHER PTHR11741 1 285 1.2E-145 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 5.1E-116 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:1.10.8.10 3 55 5.1E-27 T 22-04-2016 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 SUPERFAMILY SSF54713 56 141 7.63E-22 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 80.24 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 SUPERFAMILY SSF54713 144 283 3.79E-53 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:1.10.286.20 185 229 6.0E-21 T 22-04-2016 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 Pfam PF00889 Elongation factor TS 73 265 5.7E-68 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:3.30.479.20 169 184 4.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:3.30.479.20 230 268 4.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 Gene3D G3DSA:3.30.479.20 57 95 4.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YPO1045 0f19abe77aa2614b06a5aa4fcab3bdac 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 YPO0680 c20acde2eb5dbe0365a3e3ef318bf705 220 PANTHER PTHR30353 1 216 1.2E-169 T 22-04-2016 IPR032818 DedA family YPO0680 c20acde2eb5dbe0365a3e3ef318bf705 220 Pfam PF09335 SNARE associated Golgi protein 48 172 2.0E-17 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPO0680 c20acde2eb5dbe0365a3e3ef318bf705 220 PANTHER PTHR30353:SF10 1 216 1.2E-169 T 22-04-2016 YPO1990 400506cc5d29754a1bc04f406bbe4117 703 SMART SM00671 346 377 140.0 T 22-04-2016 IPR006597 Sel1-like repeat YPO1990 400506cc5d29754a1bc04f406bbe4117 703 SMART SM00671 484 519 20.0 T 22-04-2016 IPR006597 Sel1-like repeat YPO1990 400506cc5d29754a1bc04f406bbe4117 703 SMART SM00671 624 660 320.0 T 22-04-2016 IPR006597 Sel1-like repeat YPO1990 400506cc5d29754a1bc04f406bbe4117 703 SMART SM00671 415 451 8.5 T 22-04-2016 IPR006597 Sel1-like repeat YPO1990 400506cc5d29754a1bc04f406bbe4117 703 SUPERFAMILY SSF81901 343 519 6.54E-10 T 22-04-2016 YPO1990 400506cc5d29754a1bc04f406bbe4117 703 Pfam PF13226 Domain of unknown function (DUF4034) 31 308 7.6E-109 T 22-04-2016 IPR025115 Domain of unknown function DUF4034 YPO1990 400506cc5d29754a1bc04f406bbe4117 703 Gene3D G3DSA:1.25.40.10 602 661 3.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1990 400506cc5d29754a1bc04f406bbe4117 703 Gene3D G3DSA:1.25.40.10 409 522 3.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1990 400506cc5d29754a1bc04f406bbe4117 703 Gene3D G3DSA:1.25.40.10 319 372 3.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1026 0a1b0c77d65c761398e6f507b11222af 275 PANTHER PTHR10953:SF159 10 165 4.1E-156 T 22-04-2016 YPO1026 0a1b0c77d65c761398e6f507b11222af 275 PANTHER PTHR10953:SF159 198 266 4.1E-156 T 22-04-2016 YPO1026 0a1b0c77d65c761398e6f507b11222af 275 Pfam PF00899 ThiF family 24 262 9.3E-39 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPO1026 0a1b0c77d65c761398e6f507b11222af 275 Gene3D G3DSA:3.40.50.720 5 263 2.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1026 0a1b0c77d65c761398e6f507b11222af 275 PANTHER PTHR10953 10 165 4.1E-156 T 22-04-2016 YPO1026 0a1b0c77d65c761398e6f507b11222af 275 PANTHER PTHR10953 198 266 4.1E-156 T 22-04-2016 YPO1026 0a1b0c77d65c761398e6f507b11222af 275 SUPERFAMILY SSF69572 6 259 1.15E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPO1959 7955959cf44f247a9d72da14e1f730a7 593 PANTHER PTHR24421:SF12 85 585 1.5E-145 T 22-04-2016 YPO1959 7955959cf44f247a9d72da14e1f730a7 593 Pfam PF00672 HAMP domain 154 221 6.1E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO1959 7955959cf44f247a9d72da14e1f730a7 593 SMART SM00304 173 226 9.0E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YPO1959 7955959cf44f247a9d72da14e1f730a7 593 SUPERFAMILY SSF158472 173 221 4.32E-8 T 22-04-2016 YPO1959 7955959cf44f247a9d72da14e1f730a7 593 Gene3D G3DSA:3.30.565.10 463 586 8.4E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1959 7955959cf44f247a9d72da14e1f730a7 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 587 7.8E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1959 7955959cf44f247a9d72da14e1f730a7 593 SMART SM00387 496 589 8.1E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1959 7955959cf44f247a9d72da14e1f730a7 593 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 115 1.3E-6 T 22-04-2016 IPR029095 NarX-like, N-terminal YPO1959 7955959cf44f247a9d72da14e1f730a7 593 SUPERFAMILY SSF55874 464 585 1.3E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1959 7955959cf44f247a9d72da14e1f730a7 593 PANTHER PTHR24421 85 585 1.5E-145 T 22-04-2016 YPO1959 7955959cf44f247a9d72da14e1f730a7 593 PIRSF PIRSF003167 1 593 3.5E-200 T 22-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 YPO1959 7955959cf44f247a9d72da14e1f730a7 593 Pfam PF07730 Histidine kinase 392 455 5.2E-17 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 YPO2360 446bc755c180f92f4caa8f7d245c3e85 426 Gene3D G3DSA:1.20.1290.10 310 425 3.3E-26 T 22-04-2016 IPR029032 AhpD-like YPO2360 446bc755c180f92f4caa8f7d245c3e85 426 Gene3D G3DSA:1.20.1290.10 128 233 1.0E-11 T 22-04-2016 IPR029032 AhpD-like YPO2360 446bc755c180f92f4caa8f7d245c3e85 426 SUPERFAMILY SSF69118 282 425 1.44E-22 T 22-04-2016 IPR029032 AhpD-like YPO2360 446bc755c180f92f4caa8f7d245c3e85 426 SUPERFAMILY SSF69118 92 229 2.45E-12 T 22-04-2016 IPR029032 AhpD-like YPO3646 dfdd6a43a642e045c25b63e2ba0a71e8 155 PANTHER PTHR35603 1 155 3.5E-43 T 22-04-2016 YPO3646 dfdd6a43a642e045c25b63e2ba0a71e8 155 PANTHER PTHR35603:SF1 1 155 3.5E-43 T 22-04-2016 YPO3646 dfdd6a43a642e045c25b63e2ba0a71e8 155 Pfam PF05433 Glycine zipper 2TM domain 61 102 2.3E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YPO3213 86d201e8eb4b19d1b44654d247835418 95 SUPERFAMILY SSF51182 1 94 1.53E-31 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO3213 86d201e8eb4b19d1b44654d247835418 95 Gene3D G3DSA:2.60.120.10 1 94 2.7E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YPO3213 86d201e8eb4b19d1b44654d247835418 95 PANTHER PTHR36540:SF1 1 95 7.0E-51 T 22-04-2016 YPO3213 86d201e8eb4b19d1b44654d247835418 95 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 24.979 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 YPO3213 86d201e8eb4b19d1b44654d247835418 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 1.5E-32 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 YPO3213 86d201e8eb4b19d1b44654d247835418 95 PANTHER PTHR36540 1 95 7.0E-51 T 22-04-2016 YPO1588 26af517db3bed4f194511418d6f97cb2 95 PANTHER PTHR33336 1 93 1.2E-25 T 22-04-2016 YPO1588 26af517db3bed4f194511418d6f97cb2 95 SUPERFAMILY SSF54909 3 89 5.78E-28 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO1588 26af517db3bed4f194511418d6f97cb2 95 Gene3D G3DSA:3.30.70.900 3 94 2.5E-32 T 22-04-2016 YPO1588 26af517db3bed4f194511418d6f97cb2 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 1.9E-17 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YPO1588 26af517db3bed4f194511418d6f97cb2 95 PANTHER PTHR33336:SF5 1 93 1.2E-25 T 22-04-2016 YPO2816 bfd8d43c161474d9b7fc74835a4ac449 309 Pfam PF01148 Cytidylyltransferase family 43 307 3.6E-63 T 22-04-2016 YPO2816 bfd8d43c161474d9b7fc74835a4ac449 309 PANTHER PTHR13773:SF11 30 309 1.9E-156 T 22-04-2016 YPO2816 bfd8d43c161474d9b7fc74835a4ac449 309 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 265 291 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 YPO2816 bfd8d43c161474d9b7fc74835a4ac449 309 PANTHER PTHR13773 30 309 1.9E-156 T 22-04-2016 YPO2175 34a5c0001b0116598f7886a3c8188c9a 132 SUPERFAMILY SSF81273 2 58 2.75E-18 T 22-04-2016 YPO2175 34a5c0001b0116598f7886a3c8188c9a 132 PANTHER PTHR38097:SF1 2 132 3.5E-98 T 22-04-2016 YPO2175 34a5c0001b0116598f7886a3c8188c9a 132 Pfam PF00816 H-NS histone family 32 124 2.0E-19 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YPO2175 34a5c0001b0116598f7886a3c8188c9a 132 Gene3D G3DSA:4.10.430.10 88 132 2.9E-25 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 YPO2175 34a5c0001b0116598f7886a3c8188c9a 132 Gene3D G3DSA:1.10.287.1050 1 58 2.5E-32 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 YPO2175 34a5c0001b0116598f7886a3c8188c9a 132 SMART SM00528 84 132 9.8E-21 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 YPO2175 34a5c0001b0116598f7886a3c8188c9a 132 SUPERFAMILY SSF81273 89 132 6.67E-12 T 22-04-2016 YPO2175 34a5c0001b0116598f7886a3c8188c9a 132 PANTHER PTHR38097 2 132 3.5E-98 T 22-04-2016 YPO2175 34a5c0001b0116598f7886a3c8188c9a 132 PIRSF PIRSF002096 1 132 1.2E-54 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YPO0606 5847a96e4dc7a698001dafa5c9baf8b7 761 SMART SM00869 484 751 7.8E-26 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0606 5847a96e4dc7a698001dafa5c9baf8b7 761 Gene3D G3DSA:2.40.128.130 457 761 1.0E-16 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0606 5847a96e4dc7a698001dafa5c9baf8b7 761 Pfam PF03797 Autotransporter beta-domain 482 741 2.0E-32 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO0606 5847a96e4dc7a698001dafa5c9baf8b7 761 SUPERFAMILY SSF103515 454 761 1.31E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain YPO2493 82283192da8fec5cf061ea480ffb4f08 374 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 184 372 3.9E-21 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 SUPERFAMILY SSF50022 18 160 6.29E-46 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 Pfam PF00355 Rieske [2Fe-2S] domain 46 134 1.8E-19 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 PANTHER PTHR21266 13 374 1.9E-110 T 22-04-2016 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 SUPERFAMILY SSF55961 160 371 8.63E-35 T 22-04-2016 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 PANTHER PTHR21266:SF2 13 374 1.9E-110 T 22-04-2016 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 61 76 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 103 123 1.2E-23 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 89 112 - T 22-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 Gene3D G3DSA:3.90.380.10 154 225 5.5E-13 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 YPO2493 82283192da8fec5cf061ea480ffb4f08 374 Gene3D G3DSA:2.102.10.10 45 153 4.1E-38 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPO0420 eb67a79195de0f6ef92f78adce02ee60 360 PANTHER PTHR30469:SF10 6 352 1.6E-146 T 22-04-2016 YPO0420 eb67a79195de0f6ef92f78adce02ee60 360 SUPERFAMILY SSF111369 48 206 5.89E-24 T 22-04-2016 YPO0420 eb67a79195de0f6ef92f78adce02ee60 360 Gene3D G3DSA:2.40.50.100 151 182 6.0E-13 T 22-04-2016 YPO0420 eb67a79195de0f6ef92f78adce02ee60 360 Gene3D G3DSA:2.40.50.100 60 90 6.0E-13 T 22-04-2016 YPO0420 eb67a79195de0f6ef92f78adce02ee60 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 248 1.2E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO0420 eb67a79195de0f6ef92f78adce02ee60 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 354 1.3E-99 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO0420 eb67a79195de0f6ef92f78adce02ee60 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 336 7.4E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO0420 eb67a79195de0f6ef92f78adce02ee60 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 7.4E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YPO0420 eb67a79195de0f6ef92f78adce02ee60 360 PANTHER PTHR30469 6 352 1.6E-146 T 22-04-2016 YPO0291 ac4ea9327af411006912b6dfef7d1fa7 270 SUPERFAMILY SSF56784 1 238 4.81E-17 T 22-04-2016 IPR023214 HAD-like domain YPO0291 ac4ea9327af411006912b6dfef7d1fa7 270 PIRSF PIRSF030802 1 257 5.9E-145 T 22-04-2016 IPR024197 Uncharacterised conserved protein UCP030802 YPO0291 ac4ea9327af411006912b6dfef7d1fa7 270 Gene3D G3DSA:3.40.50.1000 5 105 2.0E-5 T 22-04-2016 IPR023214 HAD-like domain YPO0291 ac4ea9327af411006912b6dfef7d1fa7 270 Gene3D G3DSA:3.40.50.1000 183 234 2.0E-5 T 22-04-2016 IPR023214 HAD-like domain YPO0911 f848318234109885c5c36c9ff7efde8d 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 18 165 7.9E-11 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YPO0911 f848318234109885c5c36c9ff7efde8d 192 PANTHER PTHR37528 2 192 4.6E-66 T 22-04-2016 YPO0911 f848318234109885c5c36c9ff7efde8d 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 177 2.8E-36 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YPO0911 f848318234109885c5c36c9ff7efde8d 192 SUPERFAMILY SSF101327 8 176 4.97E-51 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YPO0911 f848318234109885c5c36c9ff7efde8d 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 37.498 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YPO2702 c90a015eb503e7a8070a07af354d1e85 339 Pfam PF06166 Protein of unknown function (DUF979) 6 338 6.7E-130 T 22-04-2016 IPR009323 Protein of unknown function DUF979 YPO1054 b4103add422614b2f10e7040b97955e8 340 Gene3D G3DSA:2.160.10.10 138 309 2.2E-41 T 22-04-2016 YPO1054 b4103add422614b2f10e7040b97955e8 340 Gene3D G3DSA:2.160.10.10 100 137 1.5E-11 T 22-04-2016 YPO1054 b4103add422614b2f10e7040b97955e8 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.5E-8 T 22-04-2016 IPR001451 Hexapeptide repeat YPO1054 b4103add422614b2f10e7040b97955e8 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 3.7E-8 T 22-04-2016 IPR001451 Hexapeptide repeat YPO1054 b4103add422614b2f10e7040b97955e8 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 6.6E-7 T 22-04-2016 IPR001451 Hexapeptide repeat YPO1054 b4103add422614b2f10e7040b97955e8 340 PANTHER PTHR22572 61 295 5.9E-67 T 22-04-2016 YPO1054 b4103add422614b2f10e7040b97955e8 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.5E-124 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 YPO1054 b4103add422614b2f10e7040b97955e8 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO1054 b4103add422614b2f10e7040b97955e8 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO1054 b4103add422614b2f10e7040b97955e8 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YPO1054 b4103add422614b2f10e7040b97955e8 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.424 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 YPO1054 b4103add422614b2f10e7040b97955e8 340 SUPERFAMILY SSF51161 33 316 1.18E-86 T 22-04-2016 IPR011004 Trimeric LpxA-like YPO1054 b4103add422614b2f10e7040b97955e8 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 2.0E-23 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 YPO1669 0dff469969af83e4a579857d49c63008 125 PANTHER PTHR11803 1 121 9.5E-50 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO1669 0dff469969af83e4a579857d49c63008 125 Pfam PF01042 Endoribonuclease L-PSP 5 123 1.1E-40 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO1669 0dff469969af83e4a579857d49c63008 125 SUPERFAMILY SSF55298 2 124 2.36E-41 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO1669 0dff469969af83e4a579857d49c63008 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 122 8.8E-47 T 22-04-2016 IPR006056 RidA family YPO1669 0dff469969af83e4a579857d49c63008 125 Gene3D G3DSA:3.30.1330.40 2 124 4.0E-45 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO3107 93791331392dfcc213080c32bc7a21c8 380 Pfam PF13692 Glycosyl transferases group 1 238 369 1.7E-10 T 22-04-2016 YPO3107 93791331392dfcc213080c32bc7a21c8 380 SUPERFAMILY SSF53756 5 343 1.57E-8 T 22-04-2016 YPO0477 06ca57075b7765db054496bca5aa8b0b 317 Pfam PF02401 LytB protein 3 283 1.4E-91 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 YPO0477 06ca57075b7765db054496bca5aa8b0b 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 3.8E-97 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 YPO0477 06ca57075b7765db054496bca5aa8b0b 317 PANTHER PTHR30426 1 317 1.7E-160 T 22-04-2016 YPO0477 06ca57075b7765db054496bca5aa8b0b 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.399 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 YPO1064 6225b3090af3c6c842f91ce5c954307d 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 7.9E-29 T 22-04-2016 IPR009778 Modulator of Rho-dependent transcription termination YPO1064 6225b3090af3c6c842f91ce5c954307d 86 SUPERFAMILY SSF101744 1 84 1.67E-30 T 22-04-2016 IPR023534 Rof/RNase P-like YPO0358 4f278be45f0104b000392c8a8fd068ea 130 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.237 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YPO0358 4f278be45f0104b000392c8a8fd068ea 130 PIRSF PIRSF000180 2 130 7.0E-56 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YPO0358 4f278be45f0104b000392c8a8fd068ea 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 114 6.0E-58 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YPO0358 4f278be45f0104b000392c8a8fd068ea 130 SUPERFAMILY SSF81343 2 129 5.56E-56 T 22-04-2016 YPO0358 4f278be45f0104b000392c8a8fd068ea 130 Gene3D G3DSA:1.20.1300.10 3 129 2.1E-54 T 22-04-2016 YPO0358 4f278be45f0104b000392c8a8fd068ea 130 Pfam PF02300 Fumarate reductase subunit C 3 128 4.8E-53 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YPO0569 5c026f872b7bbd6a31f1466faa100f7e 94 Pfam PF13997 YqjK-like protein 13 85 9.3E-30 T 22-04-2016 IPR025612 YqjK-like protein YPO0928 3c88f02d1589ff246f87787a5f38841b 106 PANTHER PTHR21496 1 102 4.3E-88 T 22-04-2016 YPO0928 3c88f02d1589ff246f87787a5f38841b 106 SUPERFAMILY SSF50022 1 103 5.11E-31 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPO0928 3c88f02d1589ff246f87787a5f38841b 106 Pfam PF00355 Rieske [2Fe-2S] domain 3 88 2.7E-18 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPO0928 3c88f02d1589ff246f87787a5f38841b 106 Gene3D G3DSA:2.102.10.10 1 103 1.3E-30 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YPO0928 3c88f02d1589ff246f87787a5f38841b 106 PANTHER PTHR21496:SF7 1 102 4.3E-88 T 22-04-2016 YPO2650 16925d89f717312ac146e565ec59ae94 134 PANTHER PTHR37297:SF1 2 134 1.8E-52 T 22-04-2016 YPO2650 16925d89f717312ac146e565ec59ae94 134 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 36.262 T 22-04-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YPO2650 16925d89f717312ac146e565ec59ae94 134 PIRSF PIRSF005087 1 134 2.3E-54 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPO2650 16925d89f717312ac146e565ec59ae94 134 SUPERFAMILY SSF52218 1 132 2.69E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO2650 16925d89f717312ac146e565ec59ae94 134 Gene3D G3DSA:3.40.50.360 4 133 3.0E-55 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO2650 16925d89f717312ac146e565ec59ae94 134 Pfam PF07972 NrdI Flavodoxin like 5 123 3.6E-47 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPO2650 16925d89f717312ac146e565ec59ae94 134 TIGRFAM TIGR00333 nrdI: nrdI protein 5 132 2.7E-53 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPO2650 16925d89f717312ac146e565ec59ae94 134 PANTHER PTHR37297 2 134 1.8E-52 T 22-04-2016 YPO0906 e43667fc284c08e165691a2d2cefeed5 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 30.985 T 22-04-2016 IPR002930 Glycine cleavage system H-protein YPO0906 e43667fc284c08e165691a2d2cefeed5 128 PANTHER PTHR11715 1 128 1.6E-73 T 22-04-2016 IPR002930 Glycine cleavage system H-protein YPO0906 e43667fc284c08e165691a2d2cefeed5 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 2.8E-53 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 YPO0906 e43667fc284c08e165691a2d2cefeed5 128 PANTHER PTHR11715:SF12 1 128 1.6E-73 T 22-04-2016 YPO0906 e43667fc284c08e165691a2d2cefeed5 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO0906 e43667fc284c08e165691a2d2cefeed5 128 SUPERFAMILY SSF51230 4 127 5.8E-43 T 22-04-2016 IPR011053 Single hybrid motif YPO0906 e43667fc284c08e165691a2d2cefeed5 128 Gene3D G3DSA:2.40.50.100 7 128 8.0E-49 T 22-04-2016 YPO0906 e43667fc284c08e165691a2d2cefeed5 128 Pfam PF01597 Glycine cleavage H-protein 8 127 1.1E-45 T 22-04-2016 IPR002930 Glycine cleavage system H-protein YPO0476a 23f66e30cb840234e41f30936b30dba4 152 SUPERFAMILY SSF54534 1 139 2.55E-34 T 22-04-2016 YPO0476a 23f66e30cb840234e41f30936b30dba4 152 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 71 2.4E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPO0476a 23f66e30cb840234e41f30936b30dba4 152 Gene3D G3DSA:3.10.50.40 2 76 7.9E-17 T 22-04-2016 YPO0476a 23f66e30cb840234e41f30936b30dba4 152 Gene3D G3DSA:3.10.50.40 126 141 7.9E-17 T 22-04-2016 YPO0476a 23f66e30cb840234e41f30936b30dba4 152 PANTHER PTHR10516:SF329 7 82 7.4E-24 T 22-04-2016 YPO0476a 23f66e30cb840234e41f30936b30dba4 152 PANTHER PTHR10516:SF329 129 141 7.4E-24 T 22-04-2016 YPO0476a 23f66e30cb840234e41f30936b30dba4 152 PANTHER PTHR10516 7 82 7.4E-24 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO0476a 23f66e30cb840234e41f30936b30dba4 152 PANTHER PTHR10516 129 141 7.4E-24 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO0174 49d328bc636fc7bce30edeb8b0ca63f9 706 Pfam PF12805 FUSC-like inner membrane protein yccS 64 332 2.9E-69 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal YPO0174 49d328bc636fc7bce30edeb8b0ca63f9 706 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 13 686 3.1E-156 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK YPO0174 49d328bc636fc7bce30edeb8b0ca63f9 706 PANTHER PTHR30509:SF4 1 705 0.0 T 22-04-2016 YPO0174 49d328bc636fc7bce30edeb8b0ca63f9 706 Pfam PF13515 Fusaric acid resistance protein-like 379 499 3.1E-20 T 22-04-2016 YPO0174 49d328bc636fc7bce30edeb8b0ca63f9 706 PANTHER PTHR30509 1 705 0.0 T 22-04-2016 YPO2185 1692d9e9e4269dfd39df8c2662fdcac8 333 PANTHER PTHR24220:SF535 17 325 4.7E-163 T 22-04-2016 YPO2185 1692d9e9e4269dfd39df8c2662fdcac8 333 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2185 1692d9e9e4269dfd39df8c2662fdcac8 333 PANTHER PTHR24220 17 325 4.7E-163 T 22-04-2016 YPO2185 1692d9e9e4269dfd39df8c2662fdcac8 333 SMART SM00382 44 250 4.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2185 1692d9e9e4269dfd39df8c2662fdcac8 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 326 1.2E-24 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO2185 1692d9e9e4269dfd39df8c2662fdcac8 333 SUPERFAMILY SSF52540 45 310 7.72E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2185 1692d9e9e4269dfd39df8c2662fdcac8 333 Pfam PF00005 ABC transporter 36 192 2.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2185 1692d9e9e4269dfd39df8c2662fdcac8 333 Gene3D G3DSA:3.40.50.300 6 272 4.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2185 1692d9e9e4269dfd39df8c2662fdcac8 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 1.1E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YPO1393 cd62ff6e78886be13899a872c9395e47 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 4.9E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO1393 cd62ff6e78886be13899a872c9395e47 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.373 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 YPO1393 cd62ff6e78886be13899a872c9395e47 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 2.5E-51 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 YPO1393 cd62ff6e78886be13899a872c9395e47 94 PANTHER PTHR33175 1 93 2.3E-48 T 22-04-2016 YPO1393 cd62ff6e78886be13899a872c9395e47 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.9E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO1393 cd62ff6e78886be13899a872c9395e47 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.9E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO1393 cd62ff6e78886be13899a872c9395e47 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.9E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO1393 cd62ff6e78886be13899a872c9395e47 94 SMART SM00411 1 91 2.7E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YPO1393 cd62ff6e78886be13899a872c9395e47 94 Gene3D G3DSA:4.10.520.10 1 91 9.3E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPO1393 cd62ff6e78886be13899a872c9395e47 94 SUPERFAMILY SSF47729 1 91 3.83E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YPO1393 cd62ff6e78886be13899a872c9395e47 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YPO1393 cd62ff6e78886be13899a872c9395e47 94 PANTHER PTHR33175:SF5 1 93 2.3E-48 T 22-04-2016 YPO0431 6107464d672431e495bb2895f893cf72 204 Pfam PF04972 BON domain 137 204 2.1E-18 T 22-04-2016 IPR007055 BON domain YPO0431 6107464d672431e495bb2895f893cf72 204 Pfam PF04972 BON domain 57 124 1.7E-22 T 22-04-2016 IPR007055 BON domain YPO0431 6107464d672431e495bb2895f893cf72 204 PANTHER PTHR34606 41 204 1.5E-69 T 22-04-2016 YPO0431 6107464d672431e495bb2895f893cf72 204 SMART SM00749 62 125 9.5E-11 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPO0431 6107464d672431e495bb2895f893cf72 204 SMART SM00749 141 204 2.6E-12 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YPO0431 6107464d672431e495bb2895f893cf72 204 PANTHER PTHR34606:SF3 41 204 1.5E-69 T 22-04-2016 YPO3648 eba49d9569ad284edd4223b64088e784 296 Gene3D G3DSA:1.10.1040.10 169 291 1.8E-34 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO3648 eba49d9569ad284edd4223b64088e784 296 PANTHER PTHR22981:SF69 1 296 2.1E-253 T 22-04-2016 YPO3648 eba49d9569ad284edd4223b64088e784 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 167 9.3E-38 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 YPO3648 eba49d9569ad284edd4223b64088e784 296 PIRSF PIRSF000103 1 296 7.9E-63 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 YPO3648 eba49d9569ad284edd4223b64088e784 296 SUPERFAMILY SSF48179 170 291 4.76E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO3648 eba49d9569ad284edd4223b64088e784 296 SUPERFAMILY SSF51735 5 168 1.18E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3648 eba49d9569ad284edd4223b64088e784 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 YPO3648 eba49d9569ad284edd4223b64088e784 296 Gene3D G3DSA:3.40.50.720 3 168 2.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3648 eba49d9569ad284edd4223b64088e784 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 291 2.6E-38 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 YPO3648 eba49d9569ad284edd4223b64088e784 296 PANTHER PTHR22981 1 296 2.1E-253 T 22-04-2016 YPO3301 ac76a6a75d4aecd9dae66163124611c1 519 SUPERFAMILY SSF55931 4 514 9.16E-202 T 22-04-2016 YPO3301 ac76a6a75d4aecd9dae66163124611c1 519 PANTHER PTHR38761 2 518 0.0 T 22-04-2016 YPO3301 ac76a6a75d4aecd9dae66163124611c1 519 Pfam PF04262 Glutamate-cysteine ligase 10 380 1.8E-172 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 YPO3301 ac76a6a75d4aecd9dae66163124611c1 519 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 519 227.515 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 YPO3301 ac76a6a75d4aecd9dae66163124611c1 519 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 514 5.0E-256 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 YPO1754 e670695b952b66b10ad4b4a2a1f0d6c7 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.828 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP YPO1754 e670695b952b66b10ad4b4a2a1f0d6c7 189 Pfam PF02659 Putative manganese efflux pump 31 181 1.1E-55 T 22-04-2016 IPR003810 Putative manganese efflux pump YPO1754 e670695b952b66b10ad4b4a2a1f0d6c7 189 PANTHER PTHR35529 2 188 8.4E-83 T 22-04-2016 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 Pfam PF01676 Metalloenzyme superfamily 2 398 1.5E-44 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 4.0E-196 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 PANTHER PTHR21110:SF0 2 407 1.4E-170 T 22-04-2016 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 PIRSF PIRSF001491 1 407 2.5E-167 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 Gene3D G3DSA:3.40.720.10 1 113 1.5E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 Gene3D G3DSA:3.40.720.10 240 407 1.5E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 PANTHER PTHR21110 2 407 1.4E-170 T 22-04-2016 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 Gene3D G3DSA:3.30.70.1250 114 235 4.2E-53 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 SUPERFAMILY SSF143856 117 235 2.09E-50 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.323 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 SUPERFAMILY SSF53649 1 114 1.42E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO0439 16bdd30dba58fc725e25ed15be66f907 407 SUPERFAMILY SSF53649 236 407 1.42E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO0301 6c206ac874ce80773d91066e37e8f137 212 Pfam PF06551 Protein of unknown function (DUF1120) 30 98 6.6E-8 T 22-04-2016 IPR010546 Protein of unknown function DUF1120 YPO0805 ebe37c49367e8caa0d5d9a19c6062242 101 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 16 96 5.5E-14 T 22-04-2016 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPO1209 4658a91337d16035c95082e0abcfe62c 402 PANTHER PTHR32195:SF17 1 398 4.8E-223 T 22-04-2016 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PANTHER PTHR32195 1 398 4.8E-223 T 22-04-2016 YPO1209 4658a91337d16035c95082e0abcfe62c 402 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site YPO1209 4658a91337d16035c95082e0abcfe62c 402 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 383 3.3E-136 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 148 168 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 221 240 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 37 56 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 316 334 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 82 102 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 282 301 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 337 356 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 10 33 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1209 4658a91337d16035c95082e0abcfe62c 402 PRINTS PR00166 Aromatic amino acid permease signature 182 204 5.4E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YPO1209 4658a91337d16035c95082e0abcfe62c 402 Pfam PF03222 Tryptophan/tyrosine permease family 3 389 4.4E-134 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YPO0577 534bf4e1bb58f3da68ce478202a3335a 434 Pfam PF07690 Major Facilitator Superfamily 18 309 1.2E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO0577 534bf4e1bb58f3da68ce478202a3335a 434 Gene3D G3DSA:1.20.1250.20 8 201 6.0E-46 T 22-04-2016 YPO0577 534bf4e1bb58f3da68ce478202a3335a 434 Gene3D G3DSA:1.20.1250.20 218 420 7.3E-19 T 22-04-2016 YPO0577 534bf4e1bb58f3da68ce478202a3335a 434 PANTHER PTHR11662 1 425 5.5E-261 T 22-04-2016 YPO0577 534bf4e1bb58f3da68ce478202a3335a 434 PIRSF PIRSF002808 1 427 1.5E-33 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YPO0577 534bf4e1bb58f3da68ce478202a3335a 434 PANTHER PTHR11662:SF285 1 425 5.5E-261 T 22-04-2016 YPO0577 534bf4e1bb58f3da68ce478202a3335a 434 SUPERFAMILY SSF103473 4 414 2.35E-79 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1744 e8b86a7faabeddccc01f07c9458e0d3f 199 Gene3D G3DSA:2.40.160.20 46 199 1.1E-81 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO1744 e8b86a7faabeddccc01f07c9458e0d3f 199 SUPERFAMILY SSF56925 44 199 9.42E-79 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO1744 e8b86a7faabeddccc01f07c9458e0d3f 199 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 3 199 40.142 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 YPO1744 e8b86a7faabeddccc01f07c9458e0d3f 199 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 54 199 3.4E-69 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 YPO1744 e8b86a7faabeddccc01f07c9458e0d3f 199 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 54 190 2.0E-71 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 YPO2855 e89217c58943926e06888eb9d6521559 464 PANTHER PTHR30217:SF6 7 216 6.9E-244 T 22-04-2016 YPO2855 e89217c58943926e06888eb9d6521559 464 PANTHER PTHR30217:SF6 256 463 6.9E-244 T 22-04-2016 YPO2855 e89217c58943926e06888eb9d6521559 464 ProSitePatterns PS01276 Peptidase family U32 signature. 172 190 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO2855 e89217c58943926e06888eb9d6521559 464 PANTHER PTHR30217 7 216 6.9E-244 T 22-04-2016 YPO2855 e89217c58943926e06888eb9d6521559 464 PANTHER PTHR30217 256 463 6.9E-244 T 22-04-2016 YPO2855 e89217c58943926e06888eb9d6521559 464 Pfam PF16325 Peptidase family U32 C-terminal domain 369 450 5.0E-22 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO2855 e89217c58943926e06888eb9d6521559 464 Pfam PF01136 Peptidase family U32 86 353 6.1E-95 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO0700 964efed094070f670a0eb21f4858fbcc 368 PANTHER PTHR33420:SF3 55 368 3.8E-185 T 22-04-2016 YPO0700 964efed094070f670a0eb21f4858fbcc 368 Gene3D G3DSA:2.60.40.1090 222 367 1.5E-21 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO0700 964efed094070f670a0eb21f4858fbcc 368 PANTHER PTHR33420 55 368 3.8E-185 T 22-04-2016 YPO0700 964efed094070f670a0eb21f4858fbcc 368 SUPERFAMILY SSF49401 223 367 1.49E-19 T 22-04-2016 IPR008966 Adhesion domain YPO0700 964efed094070f670a0eb21f4858fbcc 368 Pfam PF00419 Fimbrial protein 220 367 1.5E-12 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO0379 2cc48fa88d04779e8a7d158e65351eaa 141 Pfam PF02082 Transcriptional regulator 2 82 1.1E-23 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YPO0379 2cc48fa88d04779e8a7d158e65351eaa 141 SUPERFAMILY SSF46785 2 131 2.78E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0379 2cc48fa88d04779e8a7d158e65351eaa 141 PANTHER PTHR33221 2 141 7.1E-84 T 22-04-2016 YPO0379 2cc48fa88d04779e8a7d158e65351eaa 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site YPO0379 2cc48fa88d04779e8a7d158e65351eaa 141 Gene3D G3DSA:1.10.10.10 2 132 1.1E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0379 2cc48fa88d04779e8a7d158e65351eaa 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 129 1.0E-36 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YPO0379 2cc48fa88d04779e8a7d158e65351eaa 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 47.127 T 22-04-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 YPO0379 2cc48fa88d04779e8a7d158e65351eaa 141 PANTHER PTHR33221:SF4 2 141 7.1E-84 T 22-04-2016 YPO0403 92c906f8691b1100b8a950eb36752943 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 2.8E-38 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 YPO0403 92c906f8691b1100b8a950eb36752943 106 Gene3D G3DSA:3.40.50.2300 2 100 4.5E-40 T 22-04-2016 YPO0403 92c906f8691b1100b8a950eb36752943 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 4.5E-19 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO0403 92c906f8691b1100b8a950eb36752943 106 PANTHER PTHR30505 1 103 1.4E-39 T 22-04-2016 YPO0403 92c906f8691b1100b8a950eb36752943 106 SUPERFAMILY SSF52794 3 99 1.92E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YPO3085 cb1980e65a7ca669890bc807aff85674 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO3085 cb1980e65a7ca669890bc807aff85674 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO3085 cb1980e65a7ca669890bc807aff85674 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO3085 cb1980e65a7ca669890bc807aff85674 139 SUPERFAMILY SSF46955 1 126 7.69E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain YPO3085 cb1980e65a7ca669890bc807aff85674 139 SMART SM00422 1 70 4.0E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO3085 cb1980e65a7ca669890bc807aff85674 139 PANTHER PTHR30204:SF16 1 137 3.8E-83 T 22-04-2016 YPO3085 cb1980e65a7ca669890bc807aff85674 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 6.8E-57 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 YPO3085 cb1980e65a7ca669890bc807aff85674 139 PANTHER PTHR30204 1 137 3.8E-83 T 22-04-2016 YPO3085 cb1980e65a7ca669890bc807aff85674 139 Gene3D G3DSA:1.10.1660.10 56 131 9.3E-26 T 22-04-2016 YPO3085 cb1980e65a7ca669890bc807aff85674 139 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.4E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YPO3085 cb1980e65a7ca669890bc807aff85674 139 Gene3D G3DSA:1.10.1660.10 1 55 3.5E-24 T 22-04-2016 YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 PANTHER PTHR30251 7 259 8.7E-131 T 22-04-2016 YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 37 160 9.3E-44 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 SUPERFAMILY SSF49354 32 160 4.97E-41 T 22-04-2016 IPR008962 PapD-like YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 SUPERFAMILY SSF49584 154 254 2.09E-18 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 Gene3D G3DSA:2.60.40.360 37 160 6.9E-43 T 22-04-2016 IPR008962 PapD-like YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 113 130 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 PANTHER PTHR30251:SF2 7 259 8.7E-131 T 22-04-2016 YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 182 251 1.4E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 PRINTS PR00969 Pili chaperone signature 37 46 1.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 PRINTS PR00969 Pili chaperone signature 177 192 1.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 PRINTS PR00969 Pili chaperone signature 142 157 1.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 PRINTS PR00969 Pili chaperone signature 114 131 1.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 PRINTS PR00969 Pili chaperone signature 86 107 1.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO1708 3fa354fd56715eaab85e4eb816e1a089 259 Gene3D G3DSA:2.60.40.1070 164 255 7.1E-25 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO1954 a51c4f757f1bc455297eb0382412670a 155 Pfam PF13994 PgaD-like protein 5 134 2.9E-36 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 YPO1954 a51c4f757f1bc455297eb0382412670a 155 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 137 2.0E-59 T 22-04-2016 YPO1954 a51c4f757f1bc455297eb0382412670a 155 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 4 138 8.4E-40 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 YPO0235 eed5df6fad418a9d43e3b4c061d41cae 129 Gene3D G3DSA:3.90.1030.10 1 117 3.1E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0235 eed5df6fad418a9d43e3b4c061d41cae 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.9E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0235 eed5df6fad418a9d43e3b4c061d41cae 129 PANTHER PTHR14413 1 118 1.9E-67 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0235 eed5df6fad418a9d43e3b4c061d41cae 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0235 eed5df6fad418a9d43e3b4c061d41cae 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.048 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0235 eed5df6fad418a9d43e3b4c061d41cae 129 Pfam PF01196 Ribosomal protein L17 20 116 8.9E-35 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0235 eed5df6fad418a9d43e3b4c061d41cae 129 SUPERFAMILY SSF64263 1 118 3.92E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1419 210f0f239652321cd2502fe5c73c5dea 637 Pfam PF00005 ABC transporter 19 185 1.2E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1419 210f0f239652321cd2502fe5c73c5dea 637 Pfam PF00005 ABC transporter 336 469 3.2E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1419 210f0f239652321cd2502fe5c73c5dea 637 SUPERFAMILY SSF52540 311 501 2.33E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1419 210f0f239652321cd2502fe5c73c5dea 637 SUPERFAMILY SSF52540 126 244 1.44E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1419 210f0f239652321cd2502fe5c73c5dea 637 SUPERFAMILY SSF52540 4 94 1.44E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1419 210f0f239652321cd2502fe5c73c5dea 637 Pfam PF16326 ABC transporter C-terminal domain 564 633 3.8E-20 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 YPO1419 210f0f239652321cd2502fe5c73c5dea 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1419 210f0f239652321cd2502fe5c73c5dea 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1419 210f0f239652321cd2502fe5c73c5dea 637 PANTHER PTHR19211:SF45 1 574 6.2E-237 T 22-04-2016 YPO1419 210f0f239652321cd2502fe5c73c5dea 637 Gene3D G3DSA:3.40.50.300 136 282 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1419 210f0f239652321cd2502fe5c73c5dea 637 Gene3D G3DSA:3.40.50.300 5 102 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1419 210f0f239652321cd2502fe5c73c5dea 637 Gene3D G3DSA:3.40.50.300 322 537 1.9E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1419 210f0f239652321cd2502fe5c73c5dea 637 SMART SM00382 28 230 8.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1419 210f0f239652321cd2502fe5c73c5dea 637 SMART SM00382 344 514 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1419 210f0f239652321cd2502fe5c73c5dea 637 PANTHER PTHR19211 1 574 6.2E-237 T 22-04-2016 YPO1419 210f0f239652321cd2502fe5c73c5dea 637 Pfam PF12848 ABC transporter 224 298 1.7E-9 T 22-04-2016 IPR032781 ABC-transporter extension domain YPO0741 c85b1e09ddf56f48cfb30bd77bf27a8d 126 Pfam PF02561 Flagellar protein FliS 11 123 2.4E-28 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO0741 c85b1e09ddf56f48cfb30bd77bf27a8d 126 SUPERFAMILY SSF101116 20 124 4.84E-30 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO0741 c85b1e09ddf56f48cfb30bd77bf27a8d 126 PIRSF PIRSF039090 1 126 1.2E-32 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO0741 c85b1e09ddf56f48cfb30bd77bf27a8d 126 TIGRFAM TIGR00208 fliS: flagellar protein FliS 10 122 1.0E-20 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO0741 c85b1e09ddf56f48cfb30bd77bf27a8d 126 PANTHER PTHR34773 1 124 1.1E-41 T 22-04-2016 YPO0741 c85b1e09ddf56f48cfb30bd77bf27a8d 126 Gene3D G3DSA:1.20.120.340 11 124 2.1E-30 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 SUPERFAMILY SSF50331 236 359 9.23E-23 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 Pfam PF08402 TOBE domain 280 351 8.8E-9 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 PANTHER PTHR24220 5 291 7.6E-153 T 22-04-2016 YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 PANTHER PTHR24220:SF151 5 291 7.6E-153 T 22-04-2016 YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 Gene3D G3DSA:3.40.50.300 3 235 1.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 Gene3D G3DSA:2.40.50.140 282 343 9.0E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 Pfam PF00005 ABC transporter 20 161 7.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 SMART SM00382 28 210 4.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3469 6d24638894da9bd3364abdf87dab5ca2 364 SUPERFAMILY SSF52540 4 241 6.16E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2732 cca18648ea16ca6297e09b23f95a7e8a 180 PANTHER PTHR34478 1 175 5.2E-77 T 22-04-2016 YPO2732 cca18648ea16ca6297e09b23f95a7e8a 180 Pfam PF04011 LemA family 7 174 1.9E-56 T 22-04-2016 IPR007156 LemA YPO2732 cca18648ea16ca6297e09b23f95a7e8a 180 Gene3D G3DSA:1.20.1440.20 12 173 3.4E-55 T 22-04-2016 IPR023353 LemA-like domain YPO2732 cca18648ea16ca6297e09b23f95a7e8a 180 SUPERFAMILY SSF140478 25 169 1.31E-46 T 22-04-2016 IPR023353 LemA-like domain YPO2732 cca18648ea16ca6297e09b23f95a7e8a 180 PANTHER PTHR34478:SF2 1 175 5.2E-77 T 22-04-2016 YPO3484 d43cb9a33a49a564c66e2d78abb50179 351 PANTHER PTHR30137 12 346 2.3E-161 T 22-04-2016 YPO3484 d43cb9a33a49a564c66e2d78abb50179 351 PANTHER PTHR30137:SF2 12 346 2.3E-161 T 22-04-2016 YPO3484 d43cb9a33a49a564c66e2d78abb50179 351 Pfam PF00296 Luciferase-like monooxygenase 34 255 2.0E-29 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPO3484 d43cb9a33a49a564c66e2d78abb50179 351 SUPERFAMILY SSF51679 19 340 3.53E-82 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPO3484 d43cb9a33a49a564c66e2d78abb50179 351 Gene3D G3DSA:3.20.20.30 19 340 9.0E-89 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YPO3484 d43cb9a33a49a564c66e2d78abb50179 351 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 20 340 1.1E-137 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 YPO1226 fef28ff5bb00b03c9dc61bf99e5ca041 498 PANTHER PTHR11328 1 474 4.7E-122 T 22-04-2016 YPO1226 fef28ff5bb00b03c9dc61bf99e5ca041 498 SUPERFAMILY SSF103473 3 432 6.28E-29 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1226 fef28ff5bb00b03c9dc61bf99e5ca041 498 Pfam PF13347 MFS/sugar transport protein 3 435 2.2E-47 T 22-04-2016 YPO1226 fef28ff5bb00b03c9dc61bf99e5ca041 498 Gene3D G3DSA:1.20.1250.20 5 194 3.6E-12 T 22-04-2016 YPO1226 fef28ff5bb00b03c9dc61bf99e5ca041 498 Gene3D G3DSA:1.20.1250.20 232 427 6.1E-5 T 22-04-2016 YPO1226 fef28ff5bb00b03c9dc61bf99e5ca041 498 PANTHER PTHR11328:SF24 1 474 4.7E-122 T 22-04-2016 YPO0941 b70e91de335f3d4efd1f00f8abc75654 232 Pfam PF01168 Alanine racemase, N-terminal domain 7 227 1.6E-27 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YPO0941 b70e91de335f3d4efd1f00f8abc75654 232 PANTHER PTHR10146 1 232 1.5E-102 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YPO0941 b70e91de335f3d4efd1f00f8abc75654 232 PIRSF PIRSF004848 1 232 2.0E-74 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YPO0941 b70e91de335f3d4efd1f00f8abc75654 232 SUPERFAMILY SSF51419 1 225 2.36E-80 T 22-04-2016 IPR029066 PLP-binding barrel YPO0941 b70e91de335f3d4efd1f00f8abc75654 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 2.2E-92 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YPO0941 b70e91de335f3d4efd1f00f8abc75654 232 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YPO0941 b70e91de335f3d4efd1f00f8abc75654 232 Gene3D G3DSA:3.20.20.10 1 230 5.2E-90 T 22-04-2016 IPR029066 PLP-binding barrel YPO1215 43fe6b1ccc82963b02cfcdbdeabf8f46 242 Pfam PF13489 Methyltransferase domain 58 197 3.6E-25 T 22-04-2016 YPO1215 43fe6b1ccc82963b02cfcdbdeabf8f46 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 9.0E-89 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 YPO1215 43fe6b1ccc82963b02cfcdbdeabf8f46 242 PANTHER PTHR10108:SF910 1 238 2.4E-170 T 22-04-2016 YPO1215 43fe6b1ccc82963b02cfcdbdeabf8f46 242 SUPERFAMILY SSF53335 18 235 3.34E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1215 43fe6b1ccc82963b02cfcdbdeabf8f46 242 Gene3D G3DSA:3.40.50.150 28 225 2.2E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1215 43fe6b1ccc82963b02cfcdbdeabf8f46 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.542 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 YPO1215 43fe6b1ccc82963b02cfcdbdeabf8f46 242 PANTHER PTHR10108 1 238 2.4E-170 T 22-04-2016 YPO3264 adb953fe1873822e20638bfedd265e8c 257 Pfam PF03591 AzlC protein 27 167 1.6E-38 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease YPO3264 adb953fe1873822e20638bfedd265e8c 257 PANTHER PTHR34979 1 250 6.9E-61 T 22-04-2016 YPO1893 17db67576bf4fe6c7f8ffe681bacb055 422 PANTHER PTHR30061 3 422 2.8E-167 T 22-04-2016 YPO1893 17db67576bf4fe6c7f8ffe681bacb055 422 Gene3D G3DSA:3.40.190.10 157 338 5.9E-54 T 22-04-2016 YPO1893 17db67576bf4fe6c7f8ffe681bacb055 422 PANTHER PTHR30061:SF3 3 422 2.8E-167 T 22-04-2016 YPO1893 17db67576bf4fe6c7f8ffe681bacb055 422 Gene3D G3DSA:3.40.190.10 35 104 5.7E-4 T 22-04-2016 YPO1893 17db67576bf4fe6c7f8ffe681bacb055 422 Gene3D G3DSA:3.40.190.10 137 156 5.7E-4 T 22-04-2016 YPO1893 17db67576bf4fe6c7f8ffe681bacb055 422 Pfam PF01547 Bacterial extracellular solute-binding protein 36 333 9.2E-56 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YPO1893 17db67576bf4fe6c7f8ffe681bacb055 422 SUPERFAMILY SSF53850 22 420 6.09E-78 T 22-04-2016 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 PIRSF PIRSF019404 1 147 1.3E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 Pfam PF02050 Flagellar FliJ protein 19 141 2.1E-36 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 6.4E-41 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 3.7E-34 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YPO1826 a91bb39deef83981ee7d2c5501a8bf9c 148 PANTHER PTHR38786 1 147 1.7E-55 T 22-04-2016 YPO2028 62804be4777affca3052b1c14c6e6d11 291 PANTHER PTHR23344:SF2 24 291 5.9E-150 T 22-04-2016 YPO2028 62804be4777affca3052b1c14c6e6d11 291 Gene3D G3DSA:3.20.20.190 18 290 3.5E-47 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO2028 62804be4777affca3052b1c14c6e6d11 291 PANTHER PTHR23344 24 291 5.9E-150 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPO2028 62804be4777affca3052b1c14c6e6d11 291 SUPERFAMILY SSF51695 24 290 4.71E-49 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO2028 62804be4777affca3052b1c14c6e6d11 291 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 29 285 4.7E-18 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPO1409 fb364fc3591f8a1024add451e0cacff3 215 SMART SM00849 12 192 5.6E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1409 fb364fc3591f8a1024add451e0cacff3 215 SUPERFAMILY SSF56281 2 209 4.19E-61 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1409 fb364fc3591f8a1024add451e0cacff3 215 Gene3D G3DSA:3.60.15.10 2 210 4.7E-65 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1409 fb364fc3591f8a1024add451e0cacff3 215 PANTHER PTHR11935 1 214 3.6E-140 T 22-04-2016 YPO1409 fb364fc3591f8a1024add451e0cacff3 215 PANTHER PTHR11935:SF115 1 214 3.6E-140 T 22-04-2016 YPO1409 fb364fc3591f8a1024add451e0cacff3 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 1.1E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1463 9a92921df9fd79194889e8aa09cf8657 282 PIRSF PIRSF000446 2 282 3.0E-68 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 YPO1463 9a92921df9fd79194889e8aa09cf8657 282 Pfam PF00698 Acyl transferase domain 8 231 1.9E-18 T 22-04-2016 IPR014043 Acyl transferase YPO1463 9a92921df9fd79194889e8aa09cf8657 282 SUPERFAMILY SSF52151 6 126 1.26E-51 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPO1463 9a92921df9fd79194889e8aa09cf8657 282 SUPERFAMILY SSF52151 192 282 1.26E-51 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YPO1463 9a92921df9fd79194889e8aa09cf8657 282 PANTHER PTHR10982 1 281 1.4E-106 T 22-04-2016 YPO1463 9a92921df9fd79194889e8aa09cf8657 282 PANTHER PTHR10982:SF15 1 281 1.4E-106 T 22-04-2016 YPO1463 9a92921df9fd79194889e8aa09cf8657 282 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 281 2.1E-16 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain YPO1463 9a92921df9fd79194889e8aa09cf8657 282 Gene3D G3DSA:3.40.366.10 191 282 1.4E-49 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPO1463 9a92921df9fd79194889e8aa09cf8657 282 Gene3D G3DSA:3.40.366.10 4 120 1.4E-49 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YPO1463 9a92921df9fd79194889e8aa09cf8657 282 SUPERFAMILY SSF55048 124 191 4.05E-12 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 YPO1463 9a92921df9fd79194889e8aa09cf8657 282 Gene3D G3DSA:3.30.70.250 123 190 1.5E-16 T 22-04-2016 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 Gene3D G3DSA:3.40.50.300 3 167 2.4E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 7.6E-22 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 1.8E-226 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 161 1.0E-11 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 Pfam PF02421 Ferrous iron transport protein B 5 163 2.9E-65 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 SUPERFAMILY SSF52540 4 168 3.76E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 PANTHER PTHR11649 659 726 1.4E-291 T 22-04-2016 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 PANTHER PTHR11649 1 150 1.4E-291 T 22-04-2016 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 PANTHER PTHR11649 263 612 1.4E-291 T 22-04-2016 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 Pfam PF07670 Nucleoside recognition 354 444 8.6E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 Pfam PF07670 Nucleoside recognition 513 690 1.8E-36 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 PANTHER PTHR11649:SF37 659 726 1.4E-291 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 PANTHER PTHR11649:SF37 1 150 1.4E-291 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPO0132 018af6798c3cd531dd7ae470b9b11bfd 771 PANTHER PTHR11649:SF37 263 612 1.4E-291 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YPO0168 51ba9fdf03c345c90f9432f8f1ff5ca6 513 Gene3D G3DSA:3.40.50.300 24 116 4.9E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0168 51ba9fdf03c345c90f9432f8f1ff5ca6 513 Gene3D G3DSA:3.40.50.300 212 389 4.9E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0168 51ba9fdf03c345c90f9432f8f1ff5ca6 513 PANTHER PTHR30121:SF3 26 449 7.8E-189 T 22-04-2016 YPO0168 51ba9fdf03c345c90f9432f8f1ff5ca6 513 PANTHER PTHR30121 26 449 7.8E-189 T 22-04-2016 YPO0168 51ba9fdf03c345c90f9432f8f1ff5ca6 513 Pfam PF05872 Bacterial protein of unknown function (DUF853) 17 513 7.5E-235 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal YPO0168 51ba9fdf03c345c90f9432f8f1ff5ca6 513 SUPERFAMILY SSF52540 8 377 3.26E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1452 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 Gene3D G3DSA:3.40.50.720 2 247 2.3E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1452 6ba3fcce45a676dbac875e038805e275 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO1452 6ba3fcce45a676dbac875e038805e275 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 246 6.5E-62 T 22-04-2016 YPO1452 6ba3fcce45a676dbac875e038805e275 248 PANTHER PTHR24322 7 136 1.9E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 PANTHER PTHR24322 152 184 1.9E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 6ba3fcce45a676dbac875e038805e275 248 SUPERFAMILY SSF51735 2 247 3.04E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3413 b338a4631aaa0d460e0001e91d00a0eb 302 SUPERFAMILY SSF103481 45 139 1.27E-7 T 22-04-2016 YPO3413 b338a4631aaa0d460e0001e91d00a0eb 302 SUPERFAMILY SSF103481 188 296 1.31E-8 T 22-04-2016 YPO3413 b338a4631aaa0d460e0001e91d00a0eb 302 Pfam PF00892 EamA-like transporter family 157 291 2.8E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO3413 b338a4631aaa0d460e0001e91d00a0eb 302 PANTHER PTHR12715:SF7 1 299 9.5E-165 T 22-04-2016 YPO3413 b338a4631aaa0d460e0001e91d00a0eb 302 PANTHER PTHR12715 1 299 9.5E-165 T 22-04-2016 YPO2287 25c8a327f2b27dcea5dfbf051d0a830e 273 Gene3D G3DSA:1.10.3720.10 71 265 3.7E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2287 25c8a327f2b27dcea5dfbf051d0a830e 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 264 3.8E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2287 25c8a327f2b27dcea5dfbf051d0a830e 273 PANTHER PTHR30151:SF8 73 269 3.5E-107 T 22-04-2016 YPO2287 25c8a327f2b27dcea5dfbf051d0a830e 273 PANTHER PTHR30151:SF8 2 55 3.5E-107 T 22-04-2016 YPO2287 25c8a327f2b27dcea5dfbf051d0a830e 273 PANTHER PTHR30151 73 269 3.5E-107 T 22-04-2016 YPO2287 25c8a327f2b27dcea5dfbf051d0a830e 273 PANTHER PTHR30151 2 55 3.5E-107 T 22-04-2016 YPO2287 25c8a327f2b27dcea5dfbf051d0a830e 273 SUPERFAMILY SSF161098 71 259 1.7E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2690 4a38dcbf7818d2f3219b800a25b6644b 200 PIRSF PIRSF001296 1 192 6.2E-75 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPO2690 4a38dcbf7818d2f3219b800a25b6644b 200 PANTHER PTHR30042 1 195 1.4E-90 T 22-04-2016 YPO2690 4a38dcbf7818d2f3219b800a25b6644b 200 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 3.6E-69 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPO2690 4a38dcbf7818d2f3219b800a25b6644b 200 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.922 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPO2690 4a38dcbf7818d2f3219b800a25b6644b 200 Pfam PF02669 K+-transporting ATPase, c chain 5 186 2.7E-67 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPO2690 4a38dcbf7818d2f3219b800a25b6644b 200 PANTHER PTHR30042:SF2 1 195 1.4E-90 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YPO4022 58caa5f414df1cdfff0210e65aabd45a 317 SUPERFAMILY SSF53807 30 296 2.28E-65 T 22-04-2016 YPO4022 58caa5f414df1cdfff0210e65aabd45a 317 Pfam PF01497 Periplasmic binding protein 52 287 7.6E-31 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPO4022 58caa5f414df1cdfff0210e65aabd45a 317 Gene3D G3DSA:3.40.50.1980 32 159 1.9E-29 T 22-04-2016 YPO4022 58caa5f414df1cdfff0210e65aabd45a 317 PANTHER PTHR30532 1 317 7.9E-151 T 22-04-2016 YPO4022 58caa5f414df1cdfff0210e65aabd45a 317 Gene3D G3DSA:3.40.50.1980 160 310 1.1E-33 T 22-04-2016 YPO4022 58caa5f414df1cdfff0210e65aabd45a 317 PANTHER PTHR30532:SF4 1 317 7.9E-151 T 22-04-2016 YPO3182 8302d6af3ff593e682b6e7f59ab412bb 156 Gene3D G3DSA:3.40.50.960 2 152 4.1E-63 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO3182 8302d6af3ff593e682b6e7f59ab412bb 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.894 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO3182 8302d6af3ff593e682b6e7f59ab412bb 156 PANTHER PTHR21058 1 155 3.5E-77 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO3182 8302d6af3ff593e682b6e7f59ab412bb 156 SUPERFAMILY SSF52121 3 154 3.53E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO3182 8302d6af3ff593e682b6e7f59ab412bb 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.6E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO3182 8302d6af3ff593e682b6e7f59ab412bb 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.1E-58 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YPO1668 8611fdb5644865e2996739b71ad322ca 411 Gene3D G3DSA:1.20.1250.20 208 402 4.3E-16 T 22-04-2016 YPO1668 8611fdb5644865e2996739b71ad322ca 411 Gene3D G3DSA:1.20.1250.20 14 188 1.3E-18 T 22-04-2016 YPO1668 8611fdb5644865e2996739b71ad322ca 411 SUPERFAMILY SSF103473 3 407 4.32E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1668 8611fdb5644865e2996739b71ad322ca 411 Pfam PF07690 Major Facilitator Superfamily 29 361 4.7E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1668 8611fdb5644865e2996739b71ad322ca 411 PANTHER PTHR11662:SF283 28 405 4.7E-67 T 22-04-2016 YPO1668 8611fdb5644865e2996739b71ad322ca 411 PANTHER PTHR11662 28 405 4.7E-67 T 22-04-2016 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 SUPERFAMILY SSF56053 1 82 1.11E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.7E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 SUPERFAMILY SSF56053 83 177 9.08E-36 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 PANTHER PTHR11655:SF14 1 176 2.1E-88 T 22-04-2016 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 Gene3D G3DSA:3.90.930.12 83 177 3.9E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.759 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 PANTHER PTHR11655 1 176 2.1E-88 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 PIRSF PIRSF002162 1 177 2.0E-44 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 Pfam PF00347 Ribosomal protein L6 90 164 6.4E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 Pfam PF00347 Ribosomal protein L6 11 82 2.3E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 Gene3D G3DSA:3.90.930.12 2 82 7.7E-29 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.8E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.8E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0224 094b25a8e5a03f5cf60c4282e3fe4213 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.8E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 SUPERFAMILY SSF53613 5 306 6.08E-86 T 22-04-2016 IPR029056 Ribokinase-like YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 1.2E-77 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 PANTHER PTHR10584:SF166 1 306 1.1E-112 T 22-04-2016 YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 35 54 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 175 190 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 219 230 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 8 29 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 PRINTS PR00990 Ribokinase signature 107 120 2.0E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 Gene3D G3DSA:3.40.1190.20 5 306 2.6E-100 T 22-04-2016 IPR029056 Ribokinase-like YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 9.0E-113 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPO0008 9a27d5dc2a90871a627151e29ae36f09 308 PANTHER PTHR10584 1 306 1.1E-112 T 22-04-2016 YPO1543 606ab20f90b412c09a05259e8e184ff2 258 Gene3D G3DSA:3.20.20.70 4 257 1.0E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1543 606ab20f90b412c09a05259e8e184ff2 258 PANTHER PTHR21235:SF2 1 258 2.7E-118 T 22-04-2016 YPO1543 606ab20f90b412c09a05259e8e184ff2 258 Pfam PF00977 Histidine biosynthesis protein 5 239 1.0E-76 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 YPO1543 606ab20f90b412c09a05259e8e184ff2 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 4.1E-114 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 YPO1543 606ab20f90b412c09a05259e8e184ff2 258 SUPERFAMILY SSF51366 1 257 4.4E-72 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPO1543 606ab20f90b412c09a05259e8e184ff2 258 PANTHER PTHR21235 1 258 2.7E-118 T 22-04-2016 YPO1543 606ab20f90b412c09a05259e8e184ff2 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.971 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 YPO0194 8a3fc129b7a4b7506ef3a982cb5c6baa 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.847 T 22-04-2016 IPR007236 SlyX YPO0194 8a3fc129b7a4b7506ef3a982cb5c6baa 72 PANTHER PTHR36508 1 72 7.0E-27 T 22-04-2016 YPO0194 8a3fc129b7a4b7506ef3a982cb5c6baa 72 Gene3D G3DSA:1.20.5.300 2 52 1.1E-19 T 22-04-2016 YPO0194 8a3fc129b7a4b7506ef3a982cb5c6baa 72 Pfam PF04102 SlyX 6 72 4.5E-24 T 22-04-2016 IPR007236 SlyX YPO0090 1a5de43992db7adde4d4e899e0a39123 363 SUPERFAMILY SSF53067 10 261 1.4E-96 T 22-04-2016 YPO0090 1a5de43992db7adde4d4e899e0a39123 363 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 267 363 2.1E-22 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YPO0090 1a5de43992db7adde4d4e899e0a39123 363 SUPERFAMILY SSF53067 261 363 3.32E-29 T 22-04-2016 YPO0090 1a5de43992db7adde4d4e899e0a39123 363 Gene3D G3DSA:3.30.420.40 261 363 2.4E-38 T 22-04-2016 YPO0090 1a5de43992db7adde4d4e899e0a39123 363 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 258 3.1E-92 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YPO0090 1a5de43992db7adde4d4e899e0a39123 363 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 141 153 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YPO0090 1a5de43992db7adde4d4e899e0a39123 363 Gene3D G3DSA:3.30.420.40 8 259 1.5E-108 T 22-04-2016 YPO0090 1a5de43992db7adde4d4e899e0a39123 363 PANTHER PTHR10196 1 363 2.1E-191 T 22-04-2016 YPO0090 1a5de43992db7adde4d4e899e0a39123 363 PANTHER PTHR10196:SF9 1 363 2.1E-191 T 22-04-2016 YPO3357 70b7fcdb874daf9fdc402f6b3f471648 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YPO3357 70b7fcdb874daf9fdc402f6b3f471648 208 PANTHER PTHR11579 9 203 3.5E-93 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YPO3357 70b7fcdb874daf9fdc402f6b3f471648 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 1 207 2.1E-89 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YPO3357 70b7fcdb874daf9fdc402f6b3f471648 208 Gene3D G3DSA:3.40.50.150 12 205 3.0E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3357 70b7fcdb874daf9fdc402f6b3f471648 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.889 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YPO3357 70b7fcdb874daf9fdc402f6b3f471648 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 3.6E-76 T 22-04-2016 YPO3357 70b7fcdb874daf9fdc402f6b3f471648 208 SUPERFAMILY SSF53335 4 204 6.75E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0695 3cc86ba348f89d2191fe86cb7db8d86e 140 Pfam PF01478 Type IV leader peptidase family 12 108 2.1E-12 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YPO0695 3cc86ba348f89d2191fe86cb7db8d86e 140 PANTHER PTHR36506 3 138 4.0E-53 T 22-04-2016 YPO0695 3cc86ba348f89d2191fe86cb7db8d86e 140 PANTHER PTHR36506:SF1 3 138 4.0E-53 T 22-04-2016 YPO2674 9c1779582ec32a8ca804577ea9f63ea5 109 Pfam PF06411 HdeA/HdeB family 10 94 8.5E-24 T 22-04-2016 IPR010486 HNS-dependent expression A/B YPO2674 9c1779582ec32a8ca804577ea9f63ea5 109 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 34 102 2.0E-35 T 22-04-2016 YPO2674 9c1779582ec32a8ca804577ea9f63ea5 109 Gene3D G3DSA:1.10.890.10 30 95 7.9E-12 T 22-04-2016 IPR010486 HNS-dependent expression A/B YPO2674 9c1779582ec32a8ca804577ea9f63ea5 109 SUPERFAMILY SSF47752 33 94 3.14E-5 T 22-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 YPO2674 9c1779582ec32a8ca804577ea9f63ea5 109 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 2 101 28.387 T 22-04-2016 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 SUPERFAMILY SSF56322 4 452 3.4E-147 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 448 1.1E-127 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PRINTS PR00095 Anthranilate synthase component I signature 306 319 5.8E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PRINTS PR00095 Anthranilate synthase component I signature 401 415 5.8E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PRINTS PR00095 Anthranilate synthase component I signature 386 400 5.8E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PRINTS PR00095 Anthranilate synthase component I signature 292 305 5.8E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PANTHER PTHR11236:SF18 30 455 6.7E-176 T 22-04-2016 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 Pfam PF00425 chorismate binding enzyme 190 444 6.4E-94 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 PANTHER PTHR11236 30 455 6.7E-176 T 22-04-2016 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 154 1.4E-28 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YPO1773 902f3b4e8f99fa4dcce43eddfbfc5ed1 458 Gene3D G3DSA:3.60.120.10 19 452 3.5E-153 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO3981 0586c8406b4e2f048db38f43dc4671a3 168 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 165 3.5E-55 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPO2513 418cee8065e67993cb7d276e7762e0d9 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 1.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2513 418cee8065e67993cb7d276e7762e0d9 218 Gene3D G3DSA:1.10.3720.10 13 216 2.1E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2513 418cee8065e67993cb7d276e7762e0d9 218 PANTHER PTHR30614 1 218 6.2E-177 T 22-04-2016 YPO2513 418cee8065e67993cb7d276e7762e0d9 218 SUPERFAMILY SSF161098 13 201 1.7E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2513 418cee8065e67993cb7d276e7762e0d9 218 PANTHER PTHR30614:SF13 1 218 6.2E-177 T 22-04-2016 YPO2513 418cee8065e67993cb7d276e7762e0d9 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 6.8E-30 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO1608 8e2aa5e8efd7dd488af9cf9abebd2f79 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 460 2.1E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO1608 8e2aa5e8efd7dd488af9cf9abebd2f79 477 Pfam PF00367 phosphotransferase system, EIIB 404 436 2.2E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPO1608 8e2aa5e8efd7dd488af9cf9abebd2f79 477 SUPERFAMILY SSF55604 401 474 1.14E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO1608 8e2aa5e8efd7dd488af9cf9abebd2f79 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YPO1608 8e2aa5e8efd7dd488af9cf9abebd2f79 477 PANTHER PTHR30009:SF2 6 477 2.7E-264 T 22-04-2016 YPO1608 8e2aa5e8efd7dd488af9cf9abebd2f79 477 PANTHER PTHR30009 6 477 2.7E-264 T 22-04-2016 YPO1608 8e2aa5e8efd7dd488af9cf9abebd2f79 477 Gene3D G3DSA:3.30.1360.60 400 474 2.9E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YPO1608 8e2aa5e8efd7dd488af9cf9abebd2f79 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 7.2E-83 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YPO1608 8e2aa5e8efd7dd488af9cf9abebd2f79 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 2.4E-226 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YPO2904 8f0a154b9f79ed4953d79bfe820b140c 385 Pfam PF12832 MFS_1 like family 8 360 3.8E-50 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain YPO2904 8f0a154b9f79ed4953d79bfe820b140c 385 PANTHER PTHR23522 1 383 6.4E-155 T 22-04-2016 YPO2904 8f0a154b9f79ed4953d79bfe820b140c 385 SUPERFAMILY SSF103473 7 372 1.96E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2904 8f0a154b9f79ed4953d79bfe820b140c 385 PIRSF PIRSF004925 1 385 9.6E-112 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter YPO2904 8f0a154b9f79ed4953d79bfe820b140c 385 PANTHER PTHR23522:SF3 1 383 6.4E-155 T 22-04-2016 YPO2904 8f0a154b9f79ed4953d79bfe820b140c 385 Gene3D G3DSA:1.20.1250.20 199 372 6.5E-24 T 22-04-2016 YPO2904 8f0a154b9f79ed4953d79bfe820b140c 385 Gene3D G3DSA:1.20.1250.20 8 178 1.2E-11 T 22-04-2016 YPO0051 05af4319c94097504f8cddb53d47f552 55 Pfam PF00471 Ribosomal protein L33 7 53 7.0E-19 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0051 05af4319c94097504f8cddb53d47f552 55 PANTHER PTHR15238 1 55 4.7E-26 T 22-04-2016 YPO0051 05af4319c94097504f8cddb53d47f552 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.908 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0051 05af4319c94097504f8cddb53d47f552 55 SUPERFAMILY SSF57829 1 53 2.87E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 YPO0051 05af4319c94097504f8cddb53d47f552 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.3E-27 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO0051 05af4319c94097504f8cddb53d47f552 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO3117 0a90f638fda54c7d012b020fc46c6548 320 Gene3D G3DSA:3.40.50.1400 4 200 6.6E-67 T 22-04-2016 YPO3117 0a90f638fda54c7d012b020fc46c6548 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPO3117 0a90f638fda54c7d012b020fc46c6548 320 Pfam PF00762 Ferrochelatase 6 318 3.5E-107 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPO3117 0a90f638fda54c7d012b020fc46c6548 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 37.298 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPO3117 0a90f638fda54c7d012b020fc46c6548 320 Gene3D G3DSA:3.40.50.1400 201 318 9.4E-32 T 22-04-2016 YPO3117 0a90f638fda54c7d012b020fc46c6548 320 SUPERFAMILY SSF53800 3 318 1.44E-99 T 22-04-2016 YPO3117 0a90f638fda54c7d012b020fc46c6548 320 PANTHER PTHR11108 1 320 7.5E-139 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPO3117 0a90f638fda54c7d012b020fc46c6548 320 TIGRFAM TIGR00109 hemH: ferrochelatase 3 318 1.1E-105 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 Gene3D G3DSA:3.30.70.20 115 164 1.2E-10 T 22-04-2016 YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 SUPERFAMILY SSF54862 33 161 4.19E-20 T 22-04-2016 YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 Gene3D G3DSA:3.30.70.20 76 114 5.3E-6 T 22-04-2016 YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 159 1.2E-46 T 22-04-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 PANTHER PTHR24960 3 160 3.0E-40 T 22-04-2016 YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 Pfam PF12838 4Fe-4S dicluster domain 110 157 4.6E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 PANTHER PTHR24960:SF46 3 160 3.0E-40 T 22-04-2016 YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 Gene3D G3DSA:3.30.70.20 39 75 1.4E-8 T 22-04-2016 YPO3040 7c1e7d29fb023815bdcf1df6c28fd797 167 Pfam PF13187 4Fe-4S dicluster domain 39 84 1.1E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3845 c27ec898f19ac287e2e6d136a147136c 274 PANTHER PTHR31689 1 272 7.6E-142 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO3845 c27ec898f19ac287e2e6d136a147136c 274 Pfam PF01678 Diaminopimelate epimerase 152 267 5.1E-32 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO3845 c27ec898f19ac287e2e6d136a147136c 274 Pfam PF01678 Diaminopimelate epimerase 3 122 1.1E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO3845 c27ec898f19ac287e2e6d136a147136c 274 Gene3D G3DSA:3.10.310.10 122 262 4.1E-51 T 22-04-2016 YPO3845 c27ec898f19ac287e2e6d136a147136c 274 Gene3D G3DSA:3.10.310.10 1 121 1.9E-50 T 22-04-2016 YPO3845 c27ec898f19ac287e2e6d136a147136c 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO3845 c27ec898f19ac287e2e6d136a147136c 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 38.968 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO3845 c27ec898f19ac287e2e6d136a147136c 274 SUPERFAMILY SSF54506 2 273 1.68E-53 T 22-04-2016 YPO3845 c27ec898f19ac287e2e6d136a147136c 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 4.2E-102 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YPO1764 8ee323a14de53a14359114e8a709b81e 285 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 1.2E-84 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPO1764 8ee323a14de53a14359114e8a709b81e 285 SUPERFAMILY SSF53213 12 279 4.05E-46 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPO1764 8ee323a14de53a14359114e8a709b81e 285 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 1.1E-155 T 22-04-2016 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe KEGG: 00350+1.13.11.15|UniPathway: UPA00208 YPO1764 8ee323a14de53a14359114e8a709b81e 285 Gene3D G3DSA:3.40.830.10 5 269 1.2E-23 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YPO2375 668b37b427ecda904b6edcb3c8427209 298 Pfam PF00248 Aldo/keto reductase family 17 291 7.1E-61 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2375 668b37b427ecda904b6edcb3c8427209 298 Gene3D G3DSA:3.20.20.100 6 292 1.4E-65 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2375 668b37b427ecda904b6edcb3c8427209 298 PANTHER PTHR11732 2 298 6.4E-163 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPO2375 668b37b427ecda904b6edcb3c8427209 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 3.0E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO2375 668b37b427ecda904b6edcb3c8427209 298 PRINTS PR00069 Aldo-keto reductase signature 225 249 3.0E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO2375 668b37b427ecda904b6edcb3c8427209 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.0E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YPO2375 668b37b427ecda904b6edcb3c8427209 298 SUPERFAMILY SSF51430 8 295 1.83E-72 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2375 668b37b427ecda904b6edcb3c8427209 298 PANTHER PTHR11732:SF10 2 298 6.4E-163 T 22-04-2016 YPO1119 c15b8e47020d385728fa53c1e3b5b13e 110 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 30 107 9.3E-30 T 22-04-2016 IPR011846 Cyd operon protein YbgE YPO1119 c15b8e47020d385728fa53c1e3b5b13e 110 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 19 110 5.4E-41 T 22-04-2016 IPR011846 Cyd operon protein YbgE YPO3778 239e3e2d3e7ab9d5eabbb903875c264c 88 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 2.7E-20 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YPO3778 239e3e2d3e7ab9d5eabbb903875c264c 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 86 23.003 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YPO3778 239e3e2d3e7ab9d5eabbb903875c264c 88 Pfam PF02416 mttA/Hcf106 family 4 56 3.3E-12 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YPO3778 239e3e2d3e7ab9d5eabbb903875c264c 88 PANTHER PTHR33162 1 72 2.2E-21 T 22-04-2016 YPO1483 5e84d2dba43f38e3c75af12c2bd28ea7 533 PANTHER PTHR37024:SF1 2 527 3.7E-248 T 22-04-2016 YPO1483 5e84d2dba43f38e3c75af12c2bd28ea7 533 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 490 5.4E-114 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 YPO1483 5e84d2dba43f38e3c75af12c2bd28ea7 533 PANTHER PTHR37024 2 527 3.7E-248 T 22-04-2016 YPO1483 5e84d2dba43f38e3c75af12c2bd28ea7 533 Pfam PF06812 ImpA, N-terminal, type VI secretion system 33 138 6.8E-20 T 22-04-2016 IPR010657 ImpA, N-terminal YPO1483 5e84d2dba43f38e3c75af12c2bd28ea7 533 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 230 490 8.0E-88 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 YPO2661 8ebf686bc0188a0b89420d7eab1a1d78 323 PANTHER PTHR30465 1 321 1.7E-241 T 22-04-2016 YPO2661 8ebf686bc0188a0b89420d7eab1a1d78 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 318 2.7E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2661 8ebf686bc0188a0b89420d7eab1a1d78 323 Gene3D G3DSA:1.10.3720.10 91 317 3.6E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2661 8ebf686bc0188a0b89420d7eab1a1d78 323 PANTHER PTHR30465:SF73 1 321 1.7E-241 T 22-04-2016 YPO2661 8ebf686bc0188a0b89420d7eab1a1d78 323 SUPERFAMILY SSF161098 93 303 1.09E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3098 83a55277ec6b04e9d0387a78efd51ea4 247 Pfam PF00535 Glycosyl transferase family 2 4 126 1.9E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPO3098 83a55277ec6b04e9d0387a78efd51ea4 247 PANTHER PTHR22916:SF4 1 234 4.1E-90 T 22-04-2016 YPO3098 83a55277ec6b04e9d0387a78efd51ea4 247 Gene3D G3DSA:3.90.550.10 1 207 1.2E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3098 83a55277ec6b04e9d0387a78efd51ea4 247 SUPERFAMILY SSF53448 2 203 7.41E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO3098 83a55277ec6b04e9d0387a78efd51ea4 247 PANTHER PTHR22916 1 234 4.1E-90 T 22-04-2016 YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 163 191 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 Gene3D G3DSA:3.40.50.720 25 269 1.2E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 SUPERFAMILY SSF51735 26 269 7.22E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PANTHER PTHR24321 25 270 8.6E-59 T 22-04-2016 YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 36 269 5.3E-65 T 22-04-2016 YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PANTHER PTHR24321:SF6 25 270 8.6E-59 T 22-04-2016 YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 214 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 232 252 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 4.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 5.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 101 112 5.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1287 faaa903309ca2c6f975cc33c2a6c799d 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 195 5.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2675 9d7f341193a4191b94b6c3e516ecd649 391 PANTHER PTHR16254:SF27 1 388 2.2E-100 T 22-04-2016 YPO2675 9d7f341193a4191b94b6c3e516ecd649 391 SUPERFAMILY SSF81324 114 262 1.11E-18 T 22-04-2016 YPO2675 9d7f341193a4191b94b6c3e516ecd649 391 SUPERFAMILY SSF51735 239 376 4.88E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2675 9d7f341193a4191b94b6c3e516ecd649 391 PANTHER PTHR16254 1 388 2.2E-100 T 22-04-2016 YPO2675 9d7f341193a4191b94b6c3e516ecd649 391 Pfam PF02254 TrkA-N domain 243 356 6.1E-16 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YPO2675 9d7f341193a4191b94b6c3e516ecd649 391 Pfam PF07885 Ion channel 141 218 9.3E-11 T 22-04-2016 IPR013099 Potassium channel domain YPO2675 9d7f341193a4191b94b6c3e516ecd649 391 Gene3D G3DSA:3.40.50.720 239 377 5.5E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2675 9d7f341193a4191b94b6c3e516ecd649 391 Gene3D G3DSA:1.10.287.70 167 218 3.4E-13 T 22-04-2016 YPO2962 03af6304a6ebefb3a11721ac4b270dc3 161 Pfam PF05638 Type VI secretion system effector, Hcp 8 145 1.4E-23 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2962 03af6304a6ebefb3a11721ac4b270dc3 161 SUPERFAMILY SSF141452 4 160 6.41E-36 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2962 03af6304a6ebefb3a11721ac4b270dc3 161 PANTHER PTHR34319 1 161 7.4E-82 T 22-04-2016 YPO2962 03af6304a6ebefb3a11721ac4b270dc3 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 3 158 4.9E-60 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2962 03af6304a6ebefb3a11721ac4b270dc3 161 Gene3D G3DSA:2.30.110.20 2 154 4.5E-23 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO1858 61ae347a80600f80494e91c7776f6469 392 PANTHER PTHR23244 198 369 2.4E-41 T 22-04-2016 YPO1858 61ae347a80600f80494e91c7776f6469 392 PANTHER PTHR23244 34 164 2.4E-41 T 22-04-2016 YPO1858 61ae347a80600f80494e91c7776f6469 392 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 17 392 46.604 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like YPO1858 61ae347a80600f80494e91c7776f6469 392 SUPERFAMILY SSF117281 55 168 4.84E-30 T 22-04-2016 YPO1858 61ae347a80600f80494e91c7776f6469 392 SUPERFAMILY SSF117281 203 381 4.84E-30 T 22-04-2016 YPO1858 61ae347a80600f80494e91c7776f6469 392 Gene3D G3DSA:2.120.10.80 210 382 1.5E-27 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 YPO1858 61ae347a80600f80494e91c7776f6469 392 Gene3D G3DSA:2.120.10.80 55 178 1.5E-27 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 YPO1858 61ae347a80600f80494e91c7776f6469 392 PANTHER PTHR23244:SF303 198 369 2.4E-41 T 22-04-2016 YPO1858 61ae347a80600f80494e91c7776f6469 392 PANTHER PTHR23244:SF303 34 164 2.4E-41 T 22-04-2016 YPO1858 61ae347a80600f80494e91c7776f6469 392 Pfam PF01344 Kelch motif 91 140 1.5E-9 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 YPO1858 61ae347a80600f80494e91c7776f6469 392 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 38 385 1.6E-153 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 PANTHER PTHR11063 1 419 7.0E-190 T 22-04-2016 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 Gene3D G3DSA:3.40.605.10 377 417 5.2E-105 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 Gene3D G3DSA:3.40.605.10 4 222 5.2E-105 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 418 40.686 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 PANTHER PTHR11063:SF8 1 419 7.0E-190 T 22-04-2016 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 SUPERFAMILY SSF53720 4 414 7.33E-111 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 408 2.4E-184 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 PIRSF PIRSF000151 1 419 1.7E-170 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 Pfam PF00171 Aldehyde dehydrogenase family 6 282 2.5E-13 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YPO3221 a7401cccbbb77a35766ee78b54dc42ad 419 Gene3D G3DSA:3.40.309.10 225 376 2.1E-38 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YPO2237 fa5a58e530ad11ab0004f1af96dd2435 436 Gene3D G3DSA:1.20.1250.20 244 428 1.1E-21 T 22-04-2016 YPO2237 fa5a58e530ad11ab0004f1af96dd2435 436 Pfam PF07690 Major Facilitator Superfamily 33 395 1.3E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO2237 fa5a58e530ad11ab0004f1af96dd2435 436 Gene3D G3DSA:1.20.1250.20 22 225 5.7E-46 T 22-04-2016 YPO2237 fa5a58e530ad11ab0004f1af96dd2435 436 SUPERFAMILY SSF103473 16 430 9.68E-89 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2237 fa5a58e530ad11ab0004f1af96dd2435 436 PANTHER PTHR11662:SF283 1 429 4.0E-216 T 22-04-2016 YPO2237 fa5a58e530ad11ab0004f1af96dd2435 436 PANTHER PTHR11662 1 429 4.0E-216 T 22-04-2016 YPO3438 538bc081c3c524333f780b90358ac574 419 PANTHER PTHR30629:SF4 1 419 4.1E-181 T 22-04-2016 YPO3438 538bc081c3c524333f780b90358ac574 419 PANTHER PTHR30629 1 419 4.1E-181 T 22-04-2016 YPO3438 538bc081c3c524333f780b90358ac574 419 SUPERFAMILY SSF56349 97 385 1.29E-46 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YPO3438 538bc081c3c524333f780b90358ac574 419 Gene3D G3DSA:1.10.150.130 97 190 3.2E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YPO3438 538bc081c3c524333f780b90358ac574 419 Pfam PF00589 Phage integrase family 205 383 7.1E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO3438 538bc081c3c524333f780b90358ac574 419 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 1.2E-20 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YPO3438 538bc081c3c524333f780b90358ac574 419 Gene3D G3DSA:1.10.443.10 205 385 1.3E-20 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YPO1718 dcc9804cae67d267a0e52903a019583d 236 SUPERFAMILY SSF56935 54 236 3.14E-12 T 22-04-2016 YPO1718 dcc9804cae67d267a0e52903a019583d 236 PANTHER PTHR38105 4 236 1.7E-136 T 22-04-2016 YPO1718 dcc9804cae67d267a0e52903a019583d 236 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 19 236 1.7E-75 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin YPO1718 dcc9804cae67d267a0e52903a019583d 236 PANTHER PTHR38105:SF1 4 236 1.7E-136 T 22-04-2016 YPO1718 dcc9804cae67d267a0e52903a019583d 236 Gene3D G3DSA:2.40.230.30 26 236 8.8E-68 T 22-04-2016 YPO0759 a9ce9f5d2ea3e6f8bfcdfbf109383d07 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 47 455 2.1E-52 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO0759 a9ce9f5d2ea3e6f8bfcdfbf109383d07 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 46 454 6.4E-110 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YPO0759 a9ce9f5d2ea3e6f8bfcdfbf109383d07 456 PANTHER PTHR10283:SF82 9 455 1.5E-132 T 22-04-2016 YPO0759 a9ce9f5d2ea3e6f8bfcdfbf109383d07 456 PANTHER PTHR10283 9 455 1.5E-132 T 22-04-2016 YPO0759 a9ce9f5d2ea3e6f8bfcdfbf109383d07 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 405 421 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site YPO0740 a24468568e084b552e0b282a30897907 425 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 206 413 3.2E-23 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 YPO0740 a24468568e084b552e0b282a30897907 425 PANTHER PTHR30288:SF0 20 420 3.0E-90 T 22-04-2016 YPO0740 a24468568e084b552e0b282a30897907 425 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 21 99 1.3E-12 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 YPO0740 a24468568e084b552e0b282a30897907 425 PANTHER PTHR30288 20 420 3.0E-90 T 22-04-2016 YPO0740 a24468568e084b552e0b282a30897907 425 Pfam PF07196 Flagellin hook IN motif 124 174 3.5E-5 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 PANTHER PTHR11938 1 114 1.0E-78 T 22-04-2016 YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 PANTHER PTHR11938 131 156 1.0E-78 T 22-04-2016 YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Pfam PF13187 4Fe-4S dicluster domain 88 155 5.1E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 PANTHER PTHR11938:SF111 1 114 1.0E-78 T 22-04-2016 YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 PANTHER PTHR11938:SF111 131 156 1.0E-78 T 22-04-2016 YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Gene3D G3DSA:3.30.70.20 4 65 2.1E-18 T 22-04-2016 YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Pfam PF12800 4Fe-4S binding domain 12 22 0.14 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Gene3D G3DSA:3.30.70.20 97 170 1.4E-15 T 22-04-2016 YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 SUPERFAMILY SSF54862 1 162 1.26E-39 T 22-04-2016 YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 Gene3D G3DSA:3.30.70.20 66 96 3.2E-15 T 22-04-2016 YPO0343 f8f2b025eb568bf3d8fa0caf3b0ee065 185 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0540 1f96196d9ba77489c0050e51c6b150e1 164 SUPERFAMILY SSF55021 3 75 1.04E-21 T 22-04-2016 YPO0540 1f96196d9ba77489c0050e51c6b150e1 164 SUPERFAMILY SSF55021 80 163 5.8E-25 T 22-04-2016 YPO0540 1f96196d9ba77489c0050e51c6b150e1 164 Gene3D G3DSA:3.30.70.260 1 77 8.6E-36 T 22-04-2016 YPO0540 1f96196d9ba77489c0050e51c6b150e1 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 160 6.4E-66 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO0540 1f96196d9ba77489c0050e51c6b150e1 164 Gene3D G3DSA:3.30.70.1150 84 163 7.3E-27 T 22-04-2016 YPO0540 1f96196d9ba77489c0050e51c6b150e1 164 PANTHER PTHR30239 1 163 2.4E-94 T 22-04-2016 YPO0540 1f96196d9ba77489c0050e51c6b150e1 164 Pfam PF01842 ACT domain 5 69 6.9E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YPO0540 1f96196d9ba77489c0050e51c6b150e1 164 Pfam PF10369 Small subunit of acetolactate synthase 85 159 1.1E-23 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YPO0540 1f96196d9ba77489c0050e51c6b150e1 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 77 7.0E-37 T 22-04-2016 YPO3976 56cef09b3dd4688792b510b5013e46b8 280 Gene3D G3DSA:3.40.50.150 1 280 3.3E-119 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3976 56cef09b3dd4688792b510b5013e46b8 280 PANTHER PTHR37426 2 280 4.5E-166 T 22-04-2016 YPO3976 56cef09b3dd4688792b510b5013e46b8 280 PANTHER PTHR37426:SF1 2 280 4.5E-166 T 22-04-2016 YPO3976 56cef09b3dd4688792b510b5013e46b8 280 SUPERFAMILY SSF53335 9 279 2.48E-100 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3976 56cef09b3dd4688792b510b5013e46b8 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO3976 56cef09b3dd4688792b510b5013e46b8 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YPO3976 56cef09b3dd4688792b510b5013e46b8 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 7.5E-111 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 YPO3976 56cef09b3dd4688792b510b5013e46b8 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.75 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 YPO2881 cf1fbb1b451a6fd9f14df8d34aa72268 249 Pfam PF13181 Tetratricopeptide repeat 36 66 1.3E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO2881 cf1fbb1b451a6fd9f14df8d34aa72268 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 236 1.5E-81 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW YPO2881 cf1fbb1b451a6fd9f14df8d34aa72268 249 Gene3D G3DSA:1.25.40.10 36 237 1.3E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2881 cf1fbb1b451a6fd9f14df8d34aa72268 249 PANTHER PTHR23083 37 247 1.1E-16 T 22-04-2016 YPO2881 cf1fbb1b451a6fd9f14df8d34aa72268 249 Pfam PF13431 Tetratricopeptide repeat 90 122 1.6E-5 T 22-04-2016 YPO2881 cf1fbb1b451a6fd9f14df8d34aa72268 249 SUPERFAMILY SSF48452 37 193 2.94E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2881 cf1fbb1b451a6fd9f14df8d34aa72268 249 SMART SM00028 33 66 0.001 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO2881 cf1fbb1b451a6fd9f14df8d34aa72268 249 SMART SM00028 67 100 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO2881 cf1fbb1b451a6fd9f14df8d34aa72268 249 SMART SM00028 137 170 7.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO3712 84b4c9c911659250bc0840e856501387 369 SUPERFAMILY SSF50331 236 362 4.86E-32 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YPO3712 84b4c9c911659250bc0840e856501387 369 Gene3D G3DSA:3.40.50.300 4 236 3.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3712 84b4c9c911659250bc0840e856501387 369 Gene3D G3DSA:2.40.50.100 239 287 1.1E-21 T 22-04-2016 YPO3712 84b4c9c911659250bc0840e856501387 369 SUPERFAMILY SSF52540 4 243 2.05E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3712 84b4c9c911659250bc0840e856501387 369 SMART SM00382 28 211 7.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3712 84b4c9c911659250bc0840e856501387 369 PANTHER PTHR24220:SF572 5 337 4.8E-194 T 22-04-2016 YPO3712 84b4c9c911659250bc0840e856501387 369 Gene3D G3DSA:2.40.50.140 288 345 1.6E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO3712 84b4c9c911659250bc0840e856501387 369 PANTHER PTHR24220 5 337 4.8E-194 T 22-04-2016 YPO3712 84b4c9c911659250bc0840e856501387 369 Pfam PF08402 TOBE domain 281 353 2.5E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YPO3712 84b4c9c911659250bc0840e856501387 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3712 84b4c9c911659250bc0840e856501387 369 Pfam PF00005 ABC transporter 21 161 3.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1063 fc351bc81ac394254052a877243d2591 105 Gene3D G3DSA:1.10.760.10 18 104 7.0E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO1063 fc351bc81ac394254052a877243d2591 105 Pfam PF00034 Cytochrome c 34 104 3.1E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO1063 fc351bc81ac394254052a877243d2591 105 PANTHER PTHR33751 4 105 4.5E-30 T 22-04-2016 YPO1063 fc351bc81ac394254052a877243d2591 105 SUPERFAMILY SSF46626 33 104 4.8E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YPO1063 fc351bc81ac394254052a877243d2591 105 PRINTS PR00605 Class IC cytochrome C signature 78 100 7.4E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YPO1063 fc351bc81ac394254052a877243d2591 105 PRINTS PR00605 Class IC cytochrome C signature 33 44 7.4E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YPO1063 fc351bc81ac394254052a877243d2591 105 PANTHER PTHR33751:SF3 4 105 4.5E-30 T 22-04-2016 YPO3986 f9a6a3b6019b91b29f480ad2bee7da15 258 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 34 251 6.6E-92 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 YPO3986 f9a6a3b6019b91b29f480ad2bee7da15 258 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 7 253 39.403 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 YPO3986 f9a6a3b6019b91b29f480ad2bee7da15 258 PIRSF PIRSF001273 4 256 5.6E-115 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 YPO3986 f9a6a3b6019b91b29f480ad2bee7da15 258 SUPERFAMILY SSF54197 34 251 1.19E-87 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YPO3986 f9a6a3b6019b91b29f480ad2bee7da15 258 Gene3D G3DSA:3.30.428.30 30 252 1.1E-96 T 22-04-2016 YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 PANTHER PTHR11472:SF32 1 726 0.0 T 22-04-2016 YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 Pfam PF06733 DEAD_2 199 263 2.5E-7 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 SMART SM00487 23 307 0.0016 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 SMART SM00491 545 677 2.9E-32 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 Gene3D G3DSA:3.40.50.300 518 671 2.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 PANTHER PTHR11472 1 726 0.0 T 22-04-2016 YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 SMART SM00488 18 294 0.0035 T 22-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 Gene3D G3DSA:3.40.50.300 454 464 9.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 Gene3D G3DSA:3.40.50.300 211 277 9.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 Gene3D G3DSA:3.40.50.300 28 122 9.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 SUPERFAMILY SSF52540 211 265 6.14E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 SUPERFAMILY SSF52540 15 120 6.14E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 SUPERFAMILY SSF52540 636 672 6.14E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 Pfam PF00270 DEAD/DEAH box helicase 31 94 2.5E-4 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YPO1206 ec7da767724ddf9212f152177bbe8d1b 726 Pfam PF13307 Helicase C-terminal domain 534 688 1.4E-23 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YPO3142 9ff7387ada81e59bc97fa33b9fc6769d 431 SUPERFAMILY SSF111352 30 410 1.29E-127 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 YPO3142 9ff7387ada81e59bc97fa33b9fc6769d 431 ProSitePatterns PS01219 Ammonium transporters signature. 185 210 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 YPO3142 9ff7387ada81e59bc97fa33b9fc6769d 431 Pfam PF00909 Ammonium Transporter Family 36 429 3.7E-126 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 YPO3142 9ff7387ada81e59bc97fa33b9fc6769d 431 PANTHER PTHR11730 27 431 7.3E-192 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 YPO3142 9ff7387ada81e59bc97fa33b9fc6769d 431 TIGRFAM TIGR00836 amt: ammonium transporter 34 429 1.5E-136 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 YPO3142 9ff7387ada81e59bc97fa33b9fc6769d 431 Gene3D G3DSA:1.10.3430.10 29 410 5.3E-139 T 22-04-2016 IPR029020 Ammonium/urea transporter YPO3142 9ff7387ada81e59bc97fa33b9fc6769d 431 PANTHER PTHR11730:SF17 27 431 7.3E-192 T 22-04-2016 YPO2648 17038ad43c354860b37f4bcce50f78f0 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 11 323 2.4E-144 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO2648 17038ad43c354860b37f4bcce50f78f0 323 Pfam PF00268 Ribonucleotide reductase, small chain 13 277 1.5E-84 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPO2648 17038ad43c354860b37f4bcce50f78f0 323 SUPERFAMILY SSF47240 10 323 4.71E-105 T 22-04-2016 IPR009078 Ferritin-like superfamily YPO2648 17038ad43c354860b37f4bcce50f78f0 323 Gene3D G3DSA:1.10.620.20 11 278 2.4E-90 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 YPO2648 17038ad43c354860b37f4bcce50f78f0 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 101 117 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YPO2648 17038ad43c354860b37f4bcce50f78f0 323 PANTHER PTHR23409 13 319 6.7E-116 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPO2648 17038ad43c354860b37f4bcce50f78f0 323 PIRSF PIRSF000355 5 320 4.5E-81 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YPO2806 2a735456384e18c8d56002056055c34a 329 SUPERFAMILY SSF51430 1 314 1.19E-101 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2806 2a735456384e18c8d56002056055c34a 329 PANTHER PTHR11732 1 327 1.4E-217 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YPO2806 2a735456384e18c8d56002056055c34a 329 PANTHER PTHR11732:SF269 1 327 1.4E-217 T 22-04-2016 YPO2806 2a735456384e18c8d56002056055c34a 329 Pfam PF00248 Aldo/keto reductase family 16 308 1.5E-73 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO2806 2a735456384e18c8d56002056055c34a 329 Gene3D G3DSA:3.20.20.100 1 323 4.1E-114 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YPO0707 051f2b440c6cee44fae2a6c57690675d 257 PANTHER PTHR30065 1 254 5.3E-87 T 22-04-2016 YPO0707 051f2b440c6cee44fae2a6c57690675d 257 PANTHER PTHR30065:SF1 1 254 5.3E-87 T 22-04-2016 YPO0707 051f2b440c6cee44fae2a6c57690675d 257 Pfam PF01311 Bacterial export proteins, family 1 13 245 7.6E-56 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO0707 051f2b440c6cee44fae2a6c57690675d 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.49E-15 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO0707 051f2b440c6cee44fae2a6c57690675d 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.49E-15 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO0707 051f2b440c6cee44fae2a6c57690675d 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.49E-15 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO0707 051f2b440c6cee44fae2a6c57690675d 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.49E-15 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO1482 f872a627ece848e446f259c529453514 1140 PANTHER PTHR36153:SF1 1 1122 0.0 T 22-04-2016 YPO1482 f872a627ece848e446f259c529453514 1140 PANTHER PTHR36153 1 1122 0.0 T 22-04-2016 YPO1482 f872a627ece848e446f259c529453514 1140 Pfam PF06744 Type VI secretion protein IcmF C-terminal 868 1066 1.2E-56 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal YPO1482 f872a627ece848e446f259c529453514 1140 Pfam PF06761 Intracellular multiplication and human macrophage-killing 418 735 8.0E-71 T 22-04-2016 IPR009612 ImcF-related YPO1437 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Gene3D G3DSA:1.10.150.20 119 203 1.3E-27 T 22-04-2016 YPO1437 53a26ea85d5d8f9a5d6b14ed66f214f0 211 PANTHER PTHR36121:SF1 2 211 4.4E-59 T 22-04-2016 YPO1437 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Pfam PF04994 TfoX C-terminal domain 119 196 7.6E-23 T 22-04-2016 IPR007077 TfoX, C-terminal YPO1437 53a26ea85d5d8f9a5d6b14ed66f214f0 211 SUPERFAMILY SSF159894 16 106 1.12E-27 T 22-04-2016 YPO1437 53a26ea85d5d8f9a5d6b14ed66f214f0 211 PIRSF PIRSF028788 1 205 5.7E-61 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type YPO1437 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Gene3D G3DSA:3.30.1460.30 4 107 1.5E-34 T 22-04-2016 IPR007076 TfoX, N-terminal YPO1437 53a26ea85d5d8f9a5d6b14ed66f214f0 211 Pfam PF04993 TfoX N-terminal domain 18 105 1.6E-26 T 22-04-2016 IPR007076 TfoX, N-terminal YPO1437 53a26ea85d5d8f9a5d6b14ed66f214f0 211 PANTHER PTHR36121 2 211 4.4E-59 T 22-04-2016 YPO4045 e3f516bf73be6822e9dab291c1c416dd 330 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 330 40.228 T 22-04-2016 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 UniPathway: UPA00566 YPO4045 e3f516bf73be6822e9dab291c1c416dd 330 Pfam PF01757 Acyltransferase family 6 317 3.2E-31 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 YPO1362 7e2a9cdefa0c6381f5968d3073e7562f 555 SUPERFAMILY SSF52540 1 203 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1362 7e2a9cdefa0c6381f5968d3073e7562f 555 SUPERFAMILY SSF52540 244 335 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1362 7e2a9cdefa0c6381f5968d3073e7562f 555 Pfam PF11398 Protein of unknown function (DUF2813) 1 377 2.7E-158 T 22-04-2016 IPR022602 Protein of unknown function DUF2813 YPO1362 7e2a9cdefa0c6381f5968d3073e7562f 555 Gene3D G3DSA:3.40.50.300 1 348 6.4E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1362 7e2a9cdefa0c6381f5968d3073e7562f 555 PANTHER PTHR32182 1 553 0.0 T 22-04-2016 YPO1362 7e2a9cdefa0c6381f5968d3073e7562f 555 PANTHER PTHR32182:SF12 1 553 0.0 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 Gene3D G3DSA:1.20.1250.20 9 189 1.3E-29 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 433 7.0E-69 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 Gene3D G3DSA:1.20.1250.20 255 449 2.7E-12 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 PANTHER PTHR23501:SF36 7 465 0.0 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 42.468 T 22-04-2016 IPR023721 Multidrug resistance protein MdtD, putative YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 2.0E-8 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.0E-8 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 2.0E-8 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 2.0E-8 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 2.0E-8 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 Pfam PF07690 Major Facilitator Superfamily 15 405 1.1E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 PANTHER PTHR23501 7 465 0.0 T 22-04-2016 YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 SUPERFAMILY SSF103473 244 451 9.29E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2850 341f5371cfef77164dbcd102f0dd5fd3 465 SUPERFAMILY SSF103473 9 194 9.29E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0689 15d7b812aa8ad28e02d5172a325bc220 291 Pfam PF00482 Type II secretion system (T2SS), protein F 127 247 3.2E-17 T 22-04-2016 IPR018076 Type II secretion system F domain YPO0689 15d7b812aa8ad28e02d5172a325bc220 291 PANTHER PTHR35007 21 291 1.0E-99 T 22-04-2016 YPO0689 15d7b812aa8ad28e02d5172a325bc220 291 PANTHER PTHR35007:SF1 21 291 1.0E-99 T 22-04-2016 YPO2183 61c44d81695c7b98986ff20cb1ed079a 306 PANTHER PTHR30465 1 306 1.2E-164 T 22-04-2016 YPO2183 61c44d81695c7b98986ff20cb1ed079a 306 Gene3D G3DSA:1.10.3720.10 89 302 1.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2183 61c44d81695c7b98986ff20cb1ed079a 306 PANTHER PTHR30465:SF74 1 306 1.2E-164 T 22-04-2016 YPO2183 61c44d81695c7b98986ff20cb1ed079a 306 SUPERFAMILY SSF161098 91 291 2.94E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2183 61c44d81695c7b98986ff20cb1ed079a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.8E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0306 ec90585bba185c8834f07b2781832c15 466 Gene3D G3DSA:3.90.10.10 151 228 7.3E-4 T 22-04-2016 YPO0306 ec90585bba185c8834f07b2781832c15 466 Gene3D G3DSA:3.90.10.10 89 117 7.3E-4 T 22-04-2016 YPO0306 ec90585bba185c8834f07b2781832c15 466 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 113 133 - T 22-04-2016 IPR007087 Zinc finger, C2H2 GO:0046872 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 Gene3D G3DSA:3.40.50.980 79 266 7.0E-47 T 22-04-2016 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 SUPERFAMILY SSF56801 9 643 3.79E-189 T 22-04-2016 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 Gene3D G3DSA:2.30.38.10 439 515 9.0E-8 T 22-04-2016 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.234 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 8.5E-20 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 Gene3D G3DSA:3.30.300.30 518 639 1.2E-29 T 22-04-2016 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.2E-25 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 PANTHER PTHR24095 21 643 0.0 T 22-04-2016 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 Gene3D G3DSA:3.40.50.980 267 424 1.8E-25 T 22-04-2016 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 Pfam PF00501 AMP-binding enzyme 83 522 3.4E-90 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 PANTHER PTHR24095:SF178 21 643 0.0 T 22-04-2016 YPO0253 7a498ddfb160bc10d2c3fbb693572b69 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 YPO1857 f364574c1df69f3dbbb2851a2d2594b8 199 PANTHER PTHR30546 1 198 2.8E-141 T 22-04-2016 YPO1857 f364574c1df69f3dbbb2851a2d2594b8 199 PANTHER PTHR30546:SF10 1 198 2.8E-141 T 22-04-2016 YPO1857 f364574c1df69f3dbbb2851a2d2594b8 199 Pfam PF03358 NADPH-dependent FMN reductase 13 142 2.4E-12 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YPO1857 f364574c1df69f3dbbb2851a2d2594b8 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 40.549 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YPO1857 f364574c1df69f3dbbb2851a2d2594b8 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 1.6E-98 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YPO1857 f364574c1df69f3dbbb2851a2d2594b8 199 SUPERFAMILY SSF52218 1 198 6.68E-61 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO1857 f364574c1df69f3dbbb2851a2d2594b8 199 Gene3D G3DSA:3.40.50.360 1 199 7.5E-73 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO3806 e9aa5e2d1f26feb73e76dc83b3ceb0bb 428 Pfam PF02653 Branched-chain amino acid transport system / permease component 113 398 3.5E-56 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3806 e9aa5e2d1f26feb73e76dc83b3ceb0bb 428 PANTHER PTHR30482:SF9 59 428 3.1E-225 T 22-04-2016 YPO3806 e9aa5e2d1f26feb73e76dc83b3ceb0bb 428 Pfam PF11862 Domain of unknown function (DUF3382) 5 103 5.3E-26 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YPO3806 e9aa5e2d1f26feb73e76dc83b3ceb0bb 428 PANTHER PTHR30482 59 428 3.1E-225 T 22-04-2016 YPO2773 968cf8e4153a4923bc268c6401208cc7 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 1.3E-71 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 YPO2773 968cf8e4153a4923bc268c6401208cc7 190 SUPERFAMILY SSF52507 2 187 4.71E-59 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPO2773 968cf8e4153a4923bc268c6401208cc7 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.521 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 YPO2773 968cf8e4153a4923bc268c6401208cc7 190 Gene3D G3DSA:3.40.50.1950 2 189 3.6E-77 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPO2773 968cf8e4153a4923bc268c6401208cc7 190 Pfam PF02441 Flavoprotein 2 127 1.3E-25 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPO2773 968cf8e4153a4923bc268c6401208cc7 190 PANTHER PTHR30108 2 188 5.3E-127 T 22-04-2016 YPO2773 968cf8e4153a4923bc268c6401208cc7 190 PANTHER PTHR30108:SF10 2 188 5.3E-127 T 22-04-2016 YPO0860 506b3f3e963827717419ce107a5c1308 333 SUPERFAMILY SSF53822 27 330 1.78E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0860 506b3f3e963827717419ce107a5c1308 333 PANTHER PTHR32196 15 291 2.3E-41 T 22-04-2016 YPO0860 506b3f3e963827717419ce107a5c1308 333 PANTHER PTHR32196:SF9 15 291 2.3E-41 T 22-04-2016 YPO0860 506b3f3e963827717419ce107a5c1308 333 Gene3D G3DSA:3.40.50.2300 25 145 4.0E-25 T 22-04-2016 YPO0860 506b3f3e963827717419ce107a5c1308 333 Gene3D G3DSA:3.40.50.2300 146 328 1.3E-44 T 22-04-2016 YPO0860 506b3f3e963827717419ce107a5c1308 333 Pfam PF13407 Periplasmic binding protein domain 29 287 6.8E-44 T 22-04-2016 IPR025997 Periplasmic binding protein YPO2110 65577227846efcee09445f465ceb6626 401 Gene3D G3DSA:2.60.40.1080 321 399 1.3E-19 T 22-04-2016 YPO2110 65577227846efcee09445f465ceb6626 401 Pfam PF02368 Bacterial Ig-like domain (group 2) 321 396 5.4E-17 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 YPO2110 65577227846efcee09445f465ceb6626 401 SMART SM00635 318 395 6.2E-18 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 YPO2110 65577227846efcee09445f465ceb6626 401 SUPERFAMILY SSF49373 317 398 8.24E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YPO3979 4489ea4e6f59eb0e9a87cbc80dd7e499 422 PANTHER PTHR30354:SF1 1 422 5.9E-156 T 22-04-2016 YPO3979 4489ea4e6f59eb0e9a87cbc80dd7e499 422 Pfam PF02447 GntP family permease 8 415 4.8E-25 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YPO3979 4489ea4e6f59eb0e9a87cbc80dd7e499 422 PANTHER PTHR30354 1 422 5.9E-156 T 22-04-2016 YPO0267 f0afa816e97e10a2c5a299c09e9a228d 445 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 31 94 2.2E-4 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO0267 f0afa816e97e10a2c5a299c09e9a228d 445 SUPERFAMILY SSF52540 97 365 7.02E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0267 f0afa816e97e10a2c5a299c09e9a228d 445 PANTHER PTHR15184:SF48 7 420 3.0E-195 T 22-04-2016 YPO0267 f0afa816e97e10a2c5a299c09e9a228d 445 SMART SM00382 162 343 2.8E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0267 f0afa816e97e10a2c5a299c09e9a228d 445 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO0267 f0afa816e97e10a2c5a299c09e9a228d 445 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 9.9E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO0267 f0afa816e97e10a2c5a299c09e9a228d 445 Gene3D G3DSA:3.40.50.300 97 361 8.6E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0267 f0afa816e97e10a2c5a299c09e9a228d 445 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 23 425 9.7E-156 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO0267 f0afa816e97e10a2c5a299c09e9a228d 445 PANTHER PTHR15184 7 420 3.0E-195 T 22-04-2016 YPO0598 c5743148befe7f6083cf828aee6838be 562 PANTHER PTHR34597:SF2 1 562 8.1E-290 T 22-04-2016 YPO0598 c5743148befe7f6083cf828aee6838be 562 Pfam PF08479 POTRA domain, ShlB-type 77 153 3.7E-24 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPO0598 c5743148befe7f6083cf828aee6838be 562 PIRSF PIRSF029745 11 562 2.1E-157 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPO0598 c5743148befe7f6083cf828aee6838be 562 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 169 505 7.7E-22 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPO0598 c5743148befe7f6083cf828aee6838be 562 Gene3D G3DSA:3.10.20.310 73 153 3.7E-22 T 22-04-2016 YPO0598 c5743148befe7f6083cf828aee6838be 562 Gene3D G3DSA:2.40.160.50 184 560 1.2E-121 T 22-04-2016 YPO0598 c5743148befe7f6083cf828aee6838be 562 PANTHER PTHR34597 1 562 8.1E-290 T 22-04-2016 YPO4048 9a6cf7f920fb4442b48f508c237e1c06 409 PANTHER PTHR23502:SF43 13 404 0.0 T 22-04-2016 YPO4048 9a6cf7f920fb4442b48f508c237e1c06 409 Pfam PF07690 Major Facilitator Superfamily 25 364 1.9E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO4048 9a6cf7f920fb4442b48f508c237e1c06 409 SUPERFAMILY SSF103473 7 401 3.14E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO4048 9a6cf7f920fb4442b48f508c237e1c06 409 Gene3D G3DSA:1.20.1250.20 22 197 4.4E-24 T 22-04-2016 YPO4048 9a6cf7f920fb4442b48f508c237e1c06 409 PANTHER PTHR23502 13 404 0.0 T 22-04-2016 YPO0978 594e51499d159e247d431dd7d01e9091 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 1.2E-53 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO0978 594e51499d159e247d431dd7d01e9091 166 PANTHER PTHR35850 1 166 9.4E-94 T 22-04-2016 YPO0978 594e51499d159e247d431dd7d01e9091 166 PIRSF PIRSF028301 1 165 3.0E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO0978 594e51499d159e247d431dd7d01e9091 166 PANTHER PTHR35850:SF2 1 166 9.4E-94 T 22-04-2016 YPO0978 594e51499d159e247d431dd7d01e9091 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 2.0E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO2019 231405e9c8d491ad986008ebef9115c2 133 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 5.7E-45 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB YPO2019 231405e9c8d491ad986008ebef9115c2 133 PANTHER PTHR39594 1 131 1.7E-52 T 22-04-2016 YPO2019 231405e9c8d491ad986008ebef9115c2 133 PIRSF PIRSF005610 1 125 6.4E-28 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB YPO2173 4bb9507bc3e84e613082eeb053865f08 338 SUPERFAMILY SSF52172 7 144 2.28E-32 T 22-04-2016 IPR011006 CheY-like superfamily YPO2173 4bb9507bc3e84e613082eeb053865f08 338 SMART SM00448 8 120 1.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2173 4bb9507bc3e84e613082eeb053865f08 338 Gene3D G3DSA:3.40.50.2300 6 124 2.8E-30 T 22-04-2016 YPO2173 4bb9507bc3e84e613082eeb053865f08 338 Pfam PF00072 Response regulator receiver domain 10 120 4.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO2173 4bb9507bc3e84e613082eeb053865f08 338 PANTHER PTHR26402:SF554 8 151 7.0E-88 T 22-04-2016 YPO2173 4bb9507bc3e84e613082eeb053865f08 338 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 56.066 T 22-04-2016 IPR028616 Regulator of RpoS YPO2173 4bb9507bc3e84e613082eeb053865f08 338 PANTHER PTHR26402 8 151 7.0E-88 T 22-04-2016 YPO2260 faedc0b27e4880aa41c70de9f640aede 342 PIRSF PIRSF026166 1 335 9.5E-136 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter YPO2260 faedc0b27e4880aa41c70de9f640aede 342 PANTHER PTHR18640 1 342 4.2E-143 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter YPO2260 faedc0b27e4880aa41c70de9f640aede 342 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 3.4E-105 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter YPO2260 faedc0b27e4880aa41c70de9f640aede 342 PANTHER PTHR18640:SF9 1 342 4.2E-143 T 22-04-2016 YPO0772 a9efdfaad71884e9605edbd53af5893c 434 PANTHER PTHR12778 22 433 3.5E-249 T 22-04-2016 YPO0772 a9efdfaad71884e9605edbd53af5893c 434 SUPERFAMILY SSF103473 13 418 2.09E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0772 a9efdfaad71884e9605edbd53af5893c 434 PANTHER PTHR12778:SF11 22 433 3.5E-249 T 22-04-2016 YPO0772 a9efdfaad71884e9605edbd53af5893c 434 Gene3D G3DSA:1.20.1250.20 224 417 1.5E-12 T 22-04-2016 YPO0772 a9efdfaad71884e9605edbd53af5893c 434 Pfam PF07690 Major Facilitator Superfamily 23 342 8.5E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO2338 a4d12e8631d261f8ea5b19eb5d721627 327 SUPERFAMILY SSF143865 11 259 2.35E-52 T 22-04-2016 YPO2338 a4d12e8631d261f8ea5b19eb5d721627 327 Gene3D G3DSA:1.20.58.340 252 327 3.4E-19 T 22-04-2016 YPO2338 a4d12e8631d261f8ea5b19eb5d721627 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 1.8E-64 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 YPO2338 a4d12e8631d261f8ea5b19eb5d721627 327 PANTHER PTHR21535 42 327 2.3E-47 T 22-04-2016 YPO2338 a4d12e8631d261f8ea5b19eb5d721627 327 SUPERFAMILY SSF144083 263 324 2.62E-13 T 22-04-2016 YPO2338 a4d12e8631d261f8ea5b19eb5d721627 327 Gene3D G3DSA:1.20.58.340 142 243 9.5E-15 T 22-04-2016 YPO3670 8589df107d16d8005b572f87da41eabb 1307 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1304 0.0 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 YPO3670 8589df107d16d8005b572f87da41eabb 1307 Pfam PF13116 Protein of unknown function 511 795 6.9E-98 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 YPO3670 8589df107d16d8005b572f87da41eabb 1307 Pfam PF13502 AsmA-like C-terminal region 1051 1293 2.5E-62 T 22-04-2016 IPR032712 AsmA-like, C-terminal YPO3670 8589df107d16d8005b572f87da41eabb 1307 PANTHER PTHR38690 1 1307 0.0 T 22-04-2016 YPO0666 85404a8df96fe0ddee3fdc5341fb2766 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 39.963 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 YPO0666 85404a8df96fe0ddee3fdc5341fb2766 275 SUPERFAMILY SSF56300 16 273 9.99E-61 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO0666 85404a8df96fe0ddee3fdc5341fb2766 275 Gene3D G3DSA:3.60.21.10 14 253 1.1E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO0666 85404a8df96fe0ddee3fdc5341fb2766 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 207 1.8E-20 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPO0666 85404a8df96fe0ddee3fdc5341fb2766 275 PANTHER PTHR12905 51 275 3.3E-124 T 22-04-2016 YPO0666 85404a8df96fe0ddee3fdc5341fb2766 275 PANTHER PTHR12905 8 35 3.3E-124 T 22-04-2016 YPO0666 85404a8df96fe0ddee3fdc5341fb2766 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 5.0E-27 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 YPO0666 85404a8df96fe0ddee3fdc5341fb2766 275 PANTHER PTHR12905:SF7 51 275 3.3E-124 T 22-04-2016 YPO0666 85404a8df96fe0ddee3fdc5341fb2766 275 PANTHER PTHR12905:SF7 8 35 3.3E-124 T 22-04-2016 YPO1275 801372c40aedc0625d4c23b0b6f9ea94 194 SUPERFAMILY SSF54001 70 189 1.24E-39 T 22-04-2016 YPO1275 801372c40aedc0625d4c23b0b6f9ea94 194 Gene3D G3DSA:3.90.1720.10 70 189 3.8E-43 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO1275 801372c40aedc0625d4c23b0b6f9ea94 194 Pfam PF00877 NlpC/P60 family 82 185 1.6E-31 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO1275 801372c40aedc0625d4c23b0b6f9ea94 194 PANTHER PTHR21666:SF210 7 37 4.7E-100 T 22-04-2016 YPO1275 801372c40aedc0625d4c23b0b6f9ea94 194 PANTHER PTHR21666:SF210 73 189 4.7E-100 T 22-04-2016 YPO1275 801372c40aedc0625d4c23b0b6f9ea94 194 PANTHER PTHR21666 7 37 4.7E-100 T 22-04-2016 YPO1275 801372c40aedc0625d4c23b0b6f9ea94 194 PANTHER PTHR21666 73 189 4.7E-100 T 22-04-2016 YPO2331 51afc6ae24ee61290da1c663c5c9f985 113 PANTHER PTHR38008 1 111 8.9E-71 T 22-04-2016 YPO2331 51afc6ae24ee61290da1c663c5c9f985 113 Pfam PF03891 Domain of unknown function (DUF333) 62 109 1.2E-20 T 22-04-2016 IPR005590 Protein of unknown function DUF333 YPO2331 51afc6ae24ee61290da1c663c5c9f985 113 PANTHER PTHR38008:SF1 1 111 8.9E-71 T 22-04-2016 YPO0799 2f2cf99d5ccaaad756f56d2c01e76dd1 302 SUPERFAMILY SSF53850 89 295 4.71E-43 T 22-04-2016 YPO0799 2f2cf99d5ccaaad756f56d2c01e76dd1 302 SUPERFAMILY SSF46785 5 107 4.24E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0799 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.2E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO0799 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Gene3D G3DSA:3.40.190.10 178 259 1.1E-20 T 22-04-2016 YPO0799 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Gene3D G3DSA:3.40.190.10 92 177 4.1E-22 T 22-04-2016 YPO0799 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Pfam PF03466 LysR substrate binding domain 88 291 3.3E-40 T 22-04-2016 IPR005119 LysR, substrate-binding YPO0799 2f2cf99d5ccaaad756f56d2c01e76dd1 302 PANTHER PTHR30537:SF13 1 297 1.1E-203 T 22-04-2016 YPO0799 2f2cf99d5ccaaad756f56d2c01e76dd1 302 Gene3D G3DSA:1.10.10.10 4 79 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0799 2f2cf99d5ccaaad756f56d2c01e76dd1 302 PANTHER PTHR30537 1 297 1.1E-203 T 22-04-2016 YPO3206 6c06332a057275de8b84524376834884 414 PANTHER PTHR30337 1 412 4.3E-155 T 22-04-2016 YPO3206 6c06332a057275de8b84524376834884 414 Pfam PF00149 Calcineurin-like phosphoesterase 1 97 2.7E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YPO3206 6c06332a057275de8b84524376834884 414 PANTHER PTHR30337:SF0 1 412 4.3E-155 T 22-04-2016 YPO3206 6c06332a057275de8b84524376834884 414 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 378 1.0E-24 T 22-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YPO3206 6c06332a057275de8b84524376834884 414 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 4.6E-76 T 22-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 YPO3206 6c06332a057275de8b84524376834884 414 SUPERFAMILY SSF56300 1 340 2.66E-59 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO3206 6c06332a057275de8b84524376834884 414 Gene3D G3DSA:3.60.21.10 1 277 3.7E-65 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YPO2738 f547a3b3627e15553c14402ede9d2916 164 PANTHER PTHR34128:SF1 2 162 2.5E-78 T 22-04-2016 YPO2738 f547a3b3627e15553c14402ede9d2916 164 PANTHER PTHR34128 2 162 2.5E-78 T 22-04-2016 YPO2738 f547a3b3627e15553c14402ede9d2916 164 Gene3D G3DSA:2.40.50.140 26 131 3.6E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YPO2738 f547a3b3627e15553c14402ede9d2916 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.157 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 YPO2738 f547a3b3627e15553c14402ede9d2916 164 Pfam PF03100 CcmE 4 137 1.0E-44 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 YPO2738 f547a3b3627e15553c14402ede9d2916 164 SUPERFAMILY SSF82093 30 143 3.27E-41 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 YPO0511 aed4c330a494f4b0ccb7e9c866d9aae4 205 Pfam PF12059 Protein of unknown function (DUF3540) 133 205 3.3E-13 T 22-04-2016 IPR021927 Protein of unknown function DUF3540 YPO0511 aed4c330a494f4b0ccb7e9c866d9aae4 205 Pfam PF12059 Protein of unknown function (DUF3540) 55 127 1.9E-10 T 22-04-2016 IPR021927 Protein of unknown function DUF3540 YPO1965 2bc4dd72474fbd3819f9782b5e9a14d9 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 59.674 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YPO1965 2bc4dd72474fbd3819f9782b5e9a14d9 447 Pfam PF04996 Succinylarginine dihydrolase 4 445 1.8E-216 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YPO1965 2bc4dd72474fbd3819f9782b5e9a14d9 447 PANTHER PTHR30420:SF2 2 446 0.0 T 22-04-2016 YPO1965 2bc4dd72474fbd3819f9782b5e9a14d9 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 1.2E-252 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YPO1965 2bc4dd72474fbd3819f9782b5e9a14d9 447 SUPERFAMILY SSF55909 4 446 1.57E-201 T 22-04-2016 YPO1965 2bc4dd72474fbd3819f9782b5e9a14d9 447 PANTHER PTHR30420 2 446 0.0 T 22-04-2016 YPO1965 2bc4dd72474fbd3819f9782b5e9a14d9 447 Gene3D G3DSA:3.75.10.20 1 446 3.7E-224 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YPO2142 80ccbd69b2fdd279d3bd89eea6f40ac8 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 7.9E-282 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YPO2142 80ccbd69b2fdd279d3bd89eea6f40ac8 524 PANTHER PTHR10283:SF93 196 524 0.0 T 22-04-2016 YPO2142 80ccbd69b2fdd279d3bd89eea6f40ac8 524 PANTHER PTHR10283:SF93 12 168 0.0 T 22-04-2016 YPO2142 80ccbd69b2fdd279d3bd89eea6f40ac8 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 3.3E-280 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YPO2142 80ccbd69b2fdd279d3bd89eea6f40ac8 524 PANTHER PTHR10283 196 524 0.0 T 22-04-2016 YPO2142 80ccbd69b2fdd279d3bd89eea6f40ac8 524 PANTHER PTHR10283 12 168 0.0 T 22-04-2016 YPO2142 80ccbd69b2fdd279d3bd89eea6f40ac8 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 367.791 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YPO0263 b9ce5f32389b830307eb0e406ae8753a 243 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 192 2.0E-74 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPO0263 b9ce5f32389b830307eb0e406ae8753a 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPO0263 b9ce5f32389b830307eb0e406ae8753a 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 164 176 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPO0263 b9ce5f32389b830307eb0e406ae8753a 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPO0263 b9ce5f32389b830307eb0e406ae8753a 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPO0263 b9ce5f32389b830307eb0e406ae8753a 243 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 4.1E-18 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YPO0263 b9ce5f32389b830307eb0e406ae8753a 243 PANTHER PTHR30046:SF3 4 240 1.0E-165 T 22-04-2016 YPO0263 b9ce5f32389b830307eb0e406ae8753a 243 Pfam PF01514 Secretory protein of YscJ/FliF family 7 191 1.3E-28 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF YPO0263 b9ce5f32389b830307eb0e406ae8753a 243 PANTHER PTHR30046 4 240 1.0E-165 T 22-04-2016 YPO0702 f7c286147a7ecac54088d71edc05cd92 331 PANTHER PTHR37549:SF1 1 328 4.9E-95 T 22-04-2016 YPO0702 f7c286147a7ecac54088d71edc05cd92 331 PANTHER PTHR37549 1 328 4.9E-95 T 22-04-2016 YPO3286 24e2557701c5cebeb3cdf49da132cbc5 356 PANTHER PTHR21225 1 349 3.3E-224 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO3286 24e2557701c5cebeb3cdf49da132cbc5 356 SUPERFAMILY SSF51569 9 344 9.07E-136 T 22-04-2016 YPO3286 24e2557701c5cebeb3cdf49da132cbc5 356 Pfam PF00793 DAHP synthetase I family 39 340 3.4E-107 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YPO3286 24e2557701c5cebeb3cdf49da132cbc5 356 PIRSF PIRSF001361 1 354 2.9E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO3286 24e2557701c5cebeb3cdf49da132cbc5 356 PANTHER PTHR21225:SF0 1 349 3.3E-224 T 22-04-2016 YPO3286 24e2557701c5cebeb3cdf49da132cbc5 356 Gene3D G3DSA:3.20.20.70 10 347 2.8E-154 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3286 24e2557701c5cebeb3cdf49da132cbc5 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 347 1.6E-167 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YPO0323 7aaeb75657213b53e752f3e2b8973b8f 119 SUPERFAMILY SSF142906 1 115 1.09E-36 T 22-04-2016 YPO0323 7aaeb75657213b53e752f3e2b8973b8f 119 PANTHER PTHR35145 1 118 8.0E-43 T 22-04-2016 YPO0323 7aaeb75657213b53e752f3e2b8973b8f 119 Pfam PF04237 YjbR 11 102 3.9E-20 T 22-04-2016 IPR007351 Uncharacterised protein YjbR YPO3476 b6869f032553052ef6c96876079b5a87 168 PANTHER PTHR23091:SF237 3 167 2.6E-21 T 22-04-2016 YPO3476 b6869f032553052ef6c96876079b5a87 168 Pfam PF00583 Acetyltransferase (GNAT) family 49 123 5.0E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3476 b6869f032553052ef6c96876079b5a87 168 PANTHER PTHR23091 3 167 2.6E-21 T 22-04-2016 YPO3476 b6869f032553052ef6c96876079b5a87 168 SUPERFAMILY SSF55729 3 153 1.6E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3476 b6869f032553052ef6c96876079b5a87 168 Gene3D G3DSA:3.40.630.30 14 129 6.8E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2567 d178f931fdec855170e9f3736bcaefbf 717 Gene3D G3DSA:3.40.1390.20 225 365 1.5E-30 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like YPO2567 d178f931fdec855170e9f3736bcaefbf 717 Gene3D G3DSA:3.40.50.300 3 223 5.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2567 d178f931fdec855170e9f3736bcaefbf 717 Pfam PF13500 AAA domain 3 229 2.2E-51 T 22-04-2016 YPO2567 d178f931fdec855170e9f3736bcaefbf 717 SUPERFAMILY SSF75138 229 353 1.57E-25 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like YPO2567 d178f931fdec855170e9f3736bcaefbf 717 PANTHER PTHR23406:SF3 178 716 5.6E-58 T 22-04-2016 YPO2567 d178f931fdec855170e9f3736bcaefbf 717 Pfam PF07085 DRTGG domain 233 344 8.7E-29 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPO2567 d178f931fdec855170e9f3736bcaefbf 717 PIRSF PIRSF006107 1 714 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPO2567 d178f931fdec855170e9f3736bcaefbf 717 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.9E-136 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPO2567 d178f931fdec855170e9f3736bcaefbf 717 Gene3D G3DSA:3.40.50.10750 524 682 4.5E-67 T 22-04-2016 YPO2567 d178f931fdec855170e9f3736bcaefbf 717 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.1E-127 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YPO2567 d178f931fdec855170e9f3736bcaefbf 717 PANTHER PTHR23406 178 716 5.6E-58 T 22-04-2016 YPO2567 d178f931fdec855170e9f3736bcaefbf 717 SUPERFAMILY SSF52540 3 240 9.03E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2567 d178f931fdec855170e9f3736bcaefbf 717 SUPERFAMILY SSF53659 392 709 1.89E-93 T 22-04-2016 YPO2621 749882214483930664ba991f98bfc0e5 393 SUPERFAMILY SSF51905 7 180 5.28E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2621 749882214483930664ba991f98bfc0e5 393 SUPERFAMILY SSF51905 269 384 5.28E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2621 749882214483930664ba991f98bfc0e5 393 Pfam PF01494 FAD binding domain 8 341 4.0E-26 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 YPO2621 749882214483930664ba991f98bfc0e5 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 392 9.1E-125 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 YPO2621 749882214483930664ba991f98bfc0e5 393 PANTHER PTHR13789:SF233 1 393 1.7E-268 T 22-04-2016 YPO2621 749882214483930664ba991f98bfc0e5 393 Gene3D G3DSA:3.50.50.60 270 358 9.4E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2621 749882214483930664ba991f98bfc0e5 393 Gene3D G3DSA:3.50.50.60 7 185 9.4E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2621 749882214483930664ba991f98bfc0e5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 5.4E-18 T 22-04-2016 YPO2621 749882214483930664ba991f98bfc0e5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 5.4E-18 T 22-04-2016 YPO2621 749882214483930664ba991f98bfc0e5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 5.4E-18 T 22-04-2016 YPO2621 749882214483930664ba991f98bfc0e5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.4E-18 T 22-04-2016 YPO2621 749882214483930664ba991f98bfc0e5 393 PANTHER PTHR13789 1 393 1.7E-268 T 22-04-2016 YPO2377 c21de816a4d57cc0f8c505e33e36a53b 545 Gene3D G3DSA:3.40.720.10 297 539 4.9E-16 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YPO2377 c21de816a4d57cc0f8c505e33e36a53b 545 Pfam PF08019 Domain of unknown function (DUF1705) 56 208 1.4E-49 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 YPO2377 c21de816a4d57cc0f8c505e33e36a53b 545 SUPERFAMILY SSF53649 237 539 9.45E-23 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YPO2377 c21de816a4d57cc0f8c505e33e36a53b 545 PANTHER PTHR30443:SF0 1 545 3.0E-304 T 22-04-2016 YPO2377 c21de816a4d57cc0f8c505e33e36a53b 545 PANTHER PTHR30443 1 545 3.0E-304 T 22-04-2016 YPO2377 c21de816a4d57cc0f8c505e33e36a53b 545 Pfam PF00884 Sulfatase 237 525 1.4E-45 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YPO3160 a197bee84ce1f7652d5eabca07c765b2 106 PIRSF PIRSF003113 1 101 6.7E-33 T 22-04-2016 IPR002634 BolA protein YPO3160 a197bee84ce1f7652d5eabca07c765b2 106 PANTHER PTHR12735 1 105 1.8E-72 T 22-04-2016 YPO3160 a197bee84ce1f7652d5eabca07c765b2 106 Pfam PF01722 BolA-like protein 12 85 8.9E-30 T 22-04-2016 IPR002634 BolA protein YPO3160 a197bee84ce1f7652d5eabca07c765b2 106 Gene3D G3DSA:3.30.300.90 3 103 5.7E-32 T 22-04-2016 IPR002634 BolA protein YPO3160 a197bee84ce1f7652d5eabca07c765b2 106 SUPERFAMILY SSF82657 3 90 3.01E-29 T 22-04-2016 IPR002634 BolA protein YPO3160 a197bee84ce1f7652d5eabca07c765b2 106 PANTHER PTHR12735:SF23 1 105 1.8E-72 T 22-04-2016 YPO0801 4c2fd3c3d4f590e118e45d3d42428c44 211 Pfam PF01323 DSBA-like thioredoxin domain 9 185 1.1E-6 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 YPO0801 4c2fd3c3d4f590e118e45d3d42428c44 211 Gene3D G3DSA:1.10.472.60 48 167 9.4E-33 T 22-04-2016 IPR023169 UPF0413, central domain YPO0801 4c2fd3c3d4f590e118e45d3d42428c44 211 SUPERFAMILY SSF52833 4 192 6.1E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1945 28c3bdcf8c9f3c7efdcc28a785138438 387 Pfam PF02687 FtsX-like permease family 266 380 3.0E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPO1945 28c3bdcf8c9f3c7efdcc28a785138438 387 PANTHER PTHR30489 18 387 3.2E-56 T 22-04-2016 YPO1945 28c3bdcf8c9f3c7efdcc28a785138438 387 Pfam PF12704 MacB-like periplasmic core domain 40 203 3.8E-12 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YPO3475 f0e8f77e8c869b1f44ab5591feb6a0c4 95 PANTHER PTHR34477:SF1 1 91 2.4E-41 T 22-04-2016 YPO3475 f0e8f77e8c869b1f44ab5591feb6a0c4 95 Pfam PF01541 GIY-YIG catalytic domain 6 77 2.6E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPO3475 f0e8f77e8c869b1f44ab5591feb6a0c4 95 PANTHER PTHR34477 1 91 2.4E-41 T 22-04-2016 YPO3475 f0e8f77e8c869b1f44ab5591feb6a0c4 95 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 3 95 33.469 T 22-04-2016 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YPO3475 f0e8f77e8c869b1f44ab5591feb6a0c4 95 SUPERFAMILY SSF82771 5 76 6.41E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YPO1467 5b3836ca85c5aa580356acd991918f78 450 PANTHER PTHR35566:SF3 1 450 0.0 T 22-04-2016 YPO1467 5b3836ca85c5aa580356acd991918f78 450 PANTHER PTHR35566 1 450 0.0 T 22-04-2016 YPO1467 5b3836ca85c5aa580356acd991918f78 450 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 448 7.6E-139 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO1467 5b3836ca85c5aa580356acd991918f78 450 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 447 1.8E-135 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO3203 d348ec641e8807aa396deda22107d1a9 354 Pfam PF12849 PBP superfamily domain 67 319 8.7E-30 T 22-04-2016 IPR024370 PBP domain YPO3203 d348ec641e8807aa396deda22107d1a9 354 PANTHER PTHR30570 1 350 8.4E-252 T 22-04-2016 YPO3203 d348ec641e8807aa396deda22107d1a9 354 PANTHER PTHR30570:SF5 1 350 8.4E-252 T 22-04-2016 YPO3203 d348ec641e8807aa396deda22107d1a9 354 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 46 338 1.2E-68 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 YPO3203 d348ec641e8807aa396deda22107d1a9 354 Gene3D G3DSA:3.40.190.10 153 295 2.4E-34 T 22-04-2016 YPO3203 d348ec641e8807aa396deda22107d1a9 354 SUPERFAMILY SSF53850 70 351 1.63E-66 T 22-04-2016 YPO3203 d348ec641e8807aa396deda22107d1a9 354 Gene3D G3DSA:3.40.190.10 72 150 7.5E-8 T 22-04-2016 YPO3203 d348ec641e8807aa396deda22107d1a9 354 Gene3D G3DSA:3.40.190.10 296 347 7.5E-8 T 22-04-2016 YPO1955 e250d079ee45b226223a90391da0d0a7 299 PANTHER PTHR13256 70 284 1.5E-102 T 22-04-2016 YPO1955 e250d079ee45b226223a90391da0d0a7 299 Pfam PF13302 Acetyltransferase (GNAT) domain 112 237 4.7E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO1955 e250d079ee45b226223a90391da0d0a7 299 SUPERFAMILY SSF55729 89 261 5.09E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1955 e250d079ee45b226223a90391da0d0a7 299 Gene3D G3DSA:3.40.630.30 79 276 1.4E-50 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1955 e250d079ee45b226223a90391da0d0a7 299 PANTHER PTHR13256:SF22 70 284 1.5E-102 T 22-04-2016 YPO0441 a5a4adc6111358c8880a8ff9e68e2afc 233 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 1.9E-68 T 22-04-2016 IPR019305 Uncharacterised protein family Smp YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 7.4E-282 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 Pfam PF01578 Cytochrome C assembly protein 89 296 1.6E-54 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 4.9E-131 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PANTHER PTHR30009 1 418 0.0 T 22-04-2016 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PANTHER PTHR30009 473 656 0.0 T 22-04-2016 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.2E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PANTHER PTHR30009:SF0 1 418 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO2739 fa3bf10fe416a14048b549f4651da0eb 656 PANTHER PTHR30009:SF0 473 656 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 Pfam PF00765 Autoinducer synthase 13 187 6.3E-71 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 22-04-2016 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 Gene3D G3DSA:3.40.630.30 1 210 1.2E-62 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 141 162 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 94 106 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 119 140 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 PRINTS PR01549 Autoinducer synthesis protein signature 163 180 1.8E-64 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 PANTHER PTHR39322:SF1 2 216 9.7E-131 T 22-04-2016 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 PANTHER PTHR39322 2 216 9.7E-131 T 22-04-2016 YPO0984 a13902a6c643a531440160ad1e3fd1ed 216 SUPERFAMILY SSF55729 1 210 5.93E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO1442 4c6b5827ed6b591c5308d3b55b4c565f 226 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 222 26.187 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 YPO1442 4c6b5827ed6b591c5308d3b55b4c565f 226 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 219 9.0E-46 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 YPO1442 4c6b5827ed6b591c5308d3b55b4c565f 226 PANTHER PTHR38108:SF1 1 226 3.0E-82 T 22-04-2016 YPO1442 4c6b5827ed6b591c5308d3b55b4c565f 226 PANTHER PTHR38108 1 226 3.0E-82 T 22-04-2016 YPO0495 14967588ee9a29525a7fe229e3b6046f 780 Gene3D G3DSA:2.60.450.10 46 208 3.1E-24 T 22-04-2016 YPO0495 14967588ee9a29525a7fe229e3b6046f 780 Pfam PF04453 Organic solvent tolerance protein 307 693 6.2E-107 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 YPO0495 14967588ee9a29525a7fe229e3b6046f 780 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 759 20.715 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 YPO0495 14967588ee9a29525a7fe229e3b6046f 780 Pfam PF03968 OstA-like protein 53 193 2.9E-30 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal YPO0495 14967588ee9a29525a7fe229e3b6046f 780 PANTHER PTHR30189 1 778 4.3E-137 T 22-04-2016 YPO3733 6e9a54663c47e0c2d5c55b9e3712cc66 234 Pfam PF04493 Endonuclease V 15 207 3.3E-72 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 YPO3733 6e9a54663c47e0c2d5c55b9e3712cc66 234 PANTHER PTHR28511:SF1 5 227 2.4E-92 T 22-04-2016 YPO3733 6e9a54663c47e0c2d5c55b9e3712cc66 234 Hamap MF_00801 Endonuclease V [nfi]. 3 217 33.261 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 YPO3733 6e9a54663c47e0c2d5c55b9e3712cc66 234 PANTHER PTHR28511 5 227 2.4E-92 T 22-04-2016 YPO2638 385a5a8ccb4e00e888846c6ae8186d22 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 2.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO2638 385a5a8ccb4e00e888846c6ae8186d22 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 2.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO2638 385a5a8ccb4e00e888846c6ae8186d22 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 2.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO2638 385a5a8ccb4e00e888846c6ae8186d22 255 SUPERFAMILY SSF53474 3 253 7.36E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2638 385a5a8ccb4e00e888846c6ae8186d22 255 PANTHER PTHR10992 1 254 1.4E-80 T 22-04-2016 YPO2638 385a5a8ccb4e00e888846c6ae8186d22 255 Pfam PF12697 Alpha/beta hydrolase family 19 246 9.2E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO2638 385a5a8ccb4e00e888846c6ae8186d22 255 PANTHER PTHR10992:SF768 1 254 1.4E-80 T 22-04-2016 YPO2638 385a5a8ccb4e00e888846c6ae8186d22 255 Gene3D G3DSA:3.40.50.1820 10 253 6.1E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2654 02dc4ab532178ac7921e11f7c1eef281 149 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 4.7E-65 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 YPO2654 02dc4ab532178ac7921e11f7c1eef281 149 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 149 1.0E-76 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 YPO3552 1f5a345dfa6a114b4214c0621599a0e7 241 Gene3D G3DSA:1.10.3810.10 61 230 9.5E-61 T 22-04-2016 YPO3552 1f5a345dfa6a114b4214c0621599a0e7 241 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 7 232 42.33 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 YPO3552 1f5a345dfa6a114b4214c0621599a0e7 241 SUPERFAMILY SSF53955 51 231 2.45E-61 T 22-04-2016 IPR023346 Lysozyme-like domain YPO3552 1f5a345dfa6a114b4214c0621599a0e7 241 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 19 230 3.1E-83 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 YPO3552 1f5a345dfa6a114b4214c0621599a0e7 241 PANTHER PTHR30400:SF0 1 241 1.3E-124 T 22-04-2016 YPO3552 1f5a345dfa6a114b4214c0621599a0e7 241 PANTHER PTHR30400 1 241 1.3E-124 T 22-04-2016 YPO3552 1f5a345dfa6a114b4214c0621599a0e7 241 Pfam PF00912 Transglycosylase 60 227 1.2E-50 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YPO1559 2de0b8e259f91d99579e09848911e58e 379 Gene3D G3DSA:3.40.50.720 13 286 3.5E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1559 2de0b8e259f91d99579e09848911e58e 379 PANTHER PTHR10366:SF382 326 364 5.6E-154 T 22-04-2016 YPO1559 2de0b8e259f91d99579e09848911e58e 379 PANTHER PTHR10366:SF382 13 298 5.6E-154 T 22-04-2016 YPO1559 2de0b8e259f91d99579e09848911e58e 379 Pfam PF07993 Male sterility protein 16 247 4.5E-33 T 22-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 YPO1559 2de0b8e259f91d99579e09848911e58e 379 PANTHER PTHR10366 326 364 5.6E-154 T 22-04-2016 YPO1559 2de0b8e259f91d99579e09848911e58e 379 PANTHER PTHR10366 13 298 5.6E-154 T 22-04-2016 YPO1559 2de0b8e259f91d99579e09848911e58e 379 SUPERFAMILY SSF51735 12 298 2.43E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1559 2de0b8e259f91d99579e09848911e58e 379 SUPERFAMILY SSF51735 328 363 2.43E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO2897 bb3282ee938aeb2282dc15c03ef7e083 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 52.305 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 YPO2897 bb3282ee938aeb2282dc15c03ef7e083 164 PANTHER PTHR33221:SF1 2 152 5.1E-73 T 22-04-2016 YPO2897 bb3282ee938aeb2282dc15c03ef7e083 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.5E-67 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 YPO2897 bb3282ee938aeb2282dc15c03ef7e083 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site YPO2897 bb3282ee938aeb2282dc15c03ef7e083 164 Gene3D G3DSA:1.10.10.10 1 133 2.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2897 bb3282ee938aeb2282dc15c03ef7e083 164 Pfam PF02082 Transcriptional regulator 1 83 2.3E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YPO2897 bb3282ee938aeb2282dc15c03ef7e083 164 SUPERFAMILY SSF46785 2 133 1.17E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2897 bb3282ee938aeb2282dc15c03ef7e083 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.9E-47 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YPO2897 bb3282ee938aeb2282dc15c03ef7e083 164 PANTHER PTHR33221 2 152 5.1E-73 T 22-04-2016 YPO3590 b8c70136819ffc91dd6e2f667ea61a34 128 Gene3D G3DSA:3.30.1330.40 4 126 2.6E-45 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO3590 b8c70136819ffc91dd6e2f667ea61a34 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 8.2E-43 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO3590 b8c70136819ffc91dd6e2f667ea61a34 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 3.9E-52 T 22-04-2016 IPR006056 RidA family YPO3590 b8c70136819ffc91dd6e2f667ea61a34 128 PANTHER PTHR11803 1 127 3.2E-51 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YPO3590 b8c70136819ffc91dd6e2f667ea61a34 128 SUPERFAMILY SSF55298 5 127 7.38E-43 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO3590 b8c70136819ffc91dd6e2f667ea61a34 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 22-04-2016 IPR019897 RidA, conserved site YPO3805 5b79edac393f8648cc1534ce5f211543 255 Pfam PF00005 ABC transporter 23 182 3.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3805 5b79edac393f8648cc1534ce5f211543 255 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3805 5b79edac393f8648cc1534ce5f211543 255 Gene3D G3DSA:3.40.50.300 2 252 8.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3805 5b79edac393f8648cc1534ce5f211543 255 PANTHER PTHR24220:SF358 129 255 8.6E-126 T 22-04-2016 YPO3805 5b79edac393f8648cc1534ce5f211543 255 PANTHER PTHR24220:SF358 8 113 8.6E-126 T 22-04-2016 YPO3805 5b79edac393f8648cc1534ce5f211543 255 PANTHER PTHR24220 129 255 8.6E-126 T 22-04-2016 YPO3805 5b79edac393f8648cc1534ce5f211543 255 PANTHER PTHR24220 8 113 8.6E-126 T 22-04-2016 YPO3805 5b79edac393f8648cc1534ce5f211543 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 254 3.1E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPO3805 5b79edac393f8648cc1534ce5f211543 255 SMART SM00382 31 231 8.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3805 5b79edac393f8648cc1534ce5f211543 255 SUPERFAMILY SSF52540 5 253 1.13E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2357 3dbc9365b6e59ed26ac7fe7c4c818bff 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 8.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2357 3dbc9365b6e59ed26ac7fe7c4c818bff 296 PANTHER PTHR30465 7 296 3.3E-194 T 22-04-2016 YPO2357 3dbc9365b6e59ed26ac7fe7c4c818bff 296 SUPERFAMILY SSF161098 90 277 6.28E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2357 3dbc9365b6e59ed26ac7fe7c4c818bff 296 Gene3D G3DSA:1.10.3720.10 86 292 7.0E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2357 3dbc9365b6e59ed26ac7fe7c4c818bff 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 8.6E-7 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO2357 3dbc9365b6e59ed26ac7fe7c4c818bff 296 PANTHER PTHR30465:SF49 7 296 3.3E-194 T 22-04-2016 YPO1388 18c957a55b1940538ef9527dc39726a7 622 PANTHER PTHR35843 1 622 4.7E-93 T 22-04-2016 YPO1388 18c957a55b1940538ef9527dc39726a7 622 Gene3D G3DSA:3.30.1300.30 533 620 1.5E-14 T 22-04-2016 YPO1388 18c957a55b1940538ef9527dc39726a7 622 Gene3D G3DSA:3.30.1300.30 385 393 1.5E-14 T 22-04-2016 YPO1388 18c957a55b1940538ef9527dc39726a7 622 SUPERFAMILY SSF54523 533 620 3.14E-13 T 22-04-2016 YPO1388 18c957a55b1940538ef9527dc39726a7 622 Pfam PF03895 YadA-like C-terminal region 548 620 4.2E-12 T 22-04-2016 IPR005594 YadA-like, C-terminal YPO0006 08731e5149aa0e7698b62bab72d798fb 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.91 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup YPO0006 08731e5149aa0e7698b62bab72d798fb 622 PANTHER PTHR30540 16 622 2.7E-288 T 22-04-2016 YPO0006 08731e5149aa0e7698b62bab72d798fb 622 PANTHER PTHR30540:SF7 16 622 2.7E-288 T 22-04-2016 YPO0006 08731e5149aa0e7698b62bab72d798fb 622 Pfam PF02705 K+ potassium transporter 14 544 1.7E-210 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YPO0006 08731e5149aa0e7698b62bab72d798fb 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 549 5.7E-185 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YPO2757 917b86285f87478f6a762df87cbb2f51 407 SUPERFAMILY SSF53901 1 254 2.62E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2757 917b86285f87478f6a762df87cbb2f51 407 Gene3D G3DSA:3.40.47.10 6 260 7.8E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2757 917b86285f87478f6a762df87cbb2f51 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YPO2757 917b86285f87478f6a762df87cbb2f51 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 247 1.3E-40 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YPO2757 917b86285f87478f6a762df87cbb2f51 407 SUPERFAMILY SSF53901 216 405 3.7E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2757 917b86285f87478f6a762df87cbb2f51 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 362 3.2E-30 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YPO2757 917b86285f87478f6a762df87cbb2f51 407 Gene3D G3DSA:3.40.47.10 264 406 1.5E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YPO2757 917b86285f87478f6a762df87cbb2f51 407 PANTHER PTHR11712 1 405 2.2E-169 T 22-04-2016 YPO2757 917b86285f87478f6a762df87cbb2f51 407 SMART SM00825 Beta-ketoacyl synthase 4 407 2.4E-12 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 SMART SM00354 4 71 1.9E-4 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 Pfam PF13377 Periplasmic binding protein-like domain 173 338 6.6E-29 T 22-04-2016 YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 Gene3D G3DSA:1.10.260.40 4 49 5.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 PANTHER PTHR30146 4 359 2.6E-125 T 22-04-2016 YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 Gene3D G3DSA:3.40.50.2300 60 171 1.4E-14 T 22-04-2016 YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 PANTHER PTHR30146:SF4 4 359 2.6E-125 T 22-04-2016 YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 47 3.1E-8 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 SUPERFAMILY SSF53822 75 340 7.07E-42 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 SUPERFAMILY SSF47413 5 59 2.44E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0846 e6efe0543d72250e61459ec00b3a6b5e 360 Gene3D G3DSA:3.40.50.2300 172 339 1.6E-37 T 22-04-2016 YPO1397 bb450acc18195b04f70bd7ca2e98708d 478 PANTHER PTHR39479 1 478 0.0 T 22-04-2016 YPO1397 bb450acc18195b04f70bd7ca2e98708d 478 Pfam PF07063 Domain of unknown function (DUF1338) 11 424 3.3E-117 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 YPO1397 bb450acc18195b04f70bd7ca2e98708d 478 PANTHER PTHR39479:SF2 1 478 0.0 T 22-04-2016 YPO1397 bb450acc18195b04f70bd7ca2e98708d 478 SMART SM01150 13 424 5.3E-228 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 YPO1933 27f2211708b9bfce74ecf2f496fcb4d2 289 SUPERFAMILY SSF51556 22 289 8.51E-79 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO1933 27f2211708b9bfce74ecf2f496fcb4d2 289 PANTHER PTHR35563 1 289 1.1E-82 T 22-04-2016 YPO1933 27f2211708b9bfce74ecf2f496fcb4d2 289 Gene3D G3DSA:3.20.20.140 16 289 2.3E-94 T 22-04-2016 YPO1933 27f2211708b9bfce74ecf2f496fcb4d2 289 Pfam PF04909 Amidohydrolase 27 289 3.8E-48 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YPO1933 27f2211708b9bfce74ecf2f496fcb4d2 289 PANTHER PTHR35563:SF1 1 289 1.1E-82 T 22-04-2016 YPO3740 7c01c9e6a446ce1e3ea7b6532c8bf5ec 215 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 22 202 1.7E-56 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPO3740 7c01c9e6a446ce1e3ea7b6532c8bf5ec 215 SUPERFAMILY SSF51391 8 207 3.4E-63 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPO3740 7c01c9e6a446ce1e3ea7b6532c8bf5ec 215 Gene3D G3DSA:3.20.20.70 8 207 9.2E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3740 7c01c9e6a446ce1e3ea7b6532c8bf5ec 215 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 19.988 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPO3740 7c01c9e6a446ce1e3ea7b6532c8bf5ec 215 Pfam PF02581 Thiamine monophosphate synthase/TENI 21 189 5.0E-55 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPO3740 7c01c9e6a446ce1e3ea7b6532c8bf5ec 215 PANTHER PTHR20857 2 207 1.5E-72 T 22-04-2016 YPO0075 d51b23831703fcf0a70c52f3025c4843 162 PANTHER PTHR38102:SF2 1 162 8.1E-115 T 22-04-2016 YPO0075 d51b23831703fcf0a70c52f3025c4843 162 PIRSF PIRSF034445 1 152 5.6E-33 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 YPO0075 d51b23831703fcf0a70c52f3025c4843 162 PANTHER PTHR38102 1 162 8.1E-115 T 22-04-2016 YPO0075 d51b23831703fcf0a70c52f3025c4843 162 Pfam PF07813 LTXXQ motif family protein 45 142 2.5E-23 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 YPO3055 1a24278fc87b49941b2b0ebc1d90e0ef 64 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 62 28.52 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 YPO3055 1a24278fc87b49941b2b0ebc1d90e0ef 64 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 61 8.8E-38 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 YPO1443 f44389c162cc3e13908046abf71ae7b4 138 SUPERFAMILY SSF51735 2 135 7.09E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1443 f44389c162cc3e13908046abf71ae7b4 138 Pfam PF13380 CoA binding domain 14 130 3.9E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPO1443 f44389c162cc3e13908046abf71ae7b4 138 SMART SM00881 10 104 7.1E-24 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YPO1443 f44389c162cc3e13908046abf71ae7b4 138 PANTHER PTHR33303 1 133 1.1E-57 T 22-04-2016 YPO1443 f44389c162cc3e13908046abf71ae7b4 138 Gene3D G3DSA:3.40.50.720 2 135 4.8E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3982 c2cebe239815314cb8315f1541961456 165 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 3 162 3.2E-56 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPO3237 043eaf2f0ecbf755feb087b9261c125a 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 9.4E-63 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO3237 043eaf2f0ecbf755feb087b9261c125a 209 PANTHER PTHR30586 2 209 4.7E-147 T 22-04-2016 YPO3237 043eaf2f0ecbf755feb087b9261c125a 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.87 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YPO3237 043eaf2f0ecbf755feb087b9261c125a 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 206 1.2E-104 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YPO3237 043eaf2f0ecbf755feb087b9261c125a 209 PIRSF PIRSF006102 3 209 1.5E-70 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YPO3237 043eaf2f0ecbf755feb087b9261c125a 209 PANTHER PTHR30586:SF1 2 209 4.7E-147 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YPO0900 2e4b837908402d398794323c9fe6ded8 233 PANTHER PTHR20855:SF3 32 233 2.6E-69 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 YPO0900 2e4b837908402d398794323c9fe6ded8 233 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 32 233 4.6E-71 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 YPO0900 2e4b837908402d398794323c9fe6ded8 233 Pfam PF03006 Haemolysin-III related 29 226 3.7E-38 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 YPO0900 2e4b837908402d398794323c9fe6ded8 233 PANTHER PTHR20855 32 233 2.6E-69 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 YPO0792 31d25d69b71ca753a7d3f8fe136040e1 406 PANTHER PTHR23513:SF8 1 406 1.3E-217 T 22-04-2016 YPO0792 31d25d69b71ca753a7d3f8fe136040e1 406 PANTHER PTHR23513 1 406 1.3E-217 T 22-04-2016 YPO0792 31d25d69b71ca753a7d3f8fe136040e1 406 Gene3D G3DSA:1.20.1250.20 14 188 3.2E-13 T 22-04-2016 YPO0792 31d25d69b71ca753a7d3f8fe136040e1 406 Pfam PF07690 Major Facilitator Superfamily 19 343 4.4E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO0792 31d25d69b71ca753a7d3f8fe136040e1 406 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 44.294 T 22-04-2016 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 YPO0792 31d25d69b71ca753a7d3f8fe136040e1 406 Gene3D G3DSA:1.20.1250.20 210 403 6.1E-4 T 22-04-2016 YPO0792 31d25d69b71ca753a7d3f8fe136040e1 406 SUPERFAMILY SSF103473 14 401 1.57E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1385 10ced6011bea23e54455784824eb097f 588 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 8.4E-160 T 22-04-2016 IPR003776 YcaO-like domain YPO1385 10ced6011bea23e54455784824eb097f 588 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 8.8E-80 T 22-04-2016 IPR003776 YcaO-like domain YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 PANTHER PTHR11879 1 395 2.3E-281 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 PANTHER PTHR11879:SF11 1 395 2.3E-281 T 22-04-2016 YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 Pfam PF00155 Aminotransferase class I and II 27 392 4.1E-91 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 SUPERFAMILY SSF53383 1 396 5.97E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1410 b79bf534bb9bbc167993cbba9f5256b5 396 Gene3D G3DSA:3.40.640.10 45 315 1.4E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO0298 050afd9551a756d81f171b8a01f8ea3a 192 Pfam PF02342 TerD domain 1 187 2.2E-86 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPO0298 050afd9551a756d81f171b8a01f8ea3a 192 PANTHER PTHR32097 1 190 1.9E-92 T 22-04-2016 YPO0298 050afd9551a756d81f171b8a01f8ea3a 192 Gene3D G3DSA:2.60.60.30 19 184 4.6E-75 T 22-04-2016 YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 Pfam PF11713 Peptidase C80 family 772 926 1.7E-36 T 22-04-2016 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 Pfam PF11713 Peptidase C80 family 1084 1260 1.1E-31 T 22-04-2016 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 Gene3D G3DSA:2.150.10.10 2493 2603 7.3E-7 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 Gene3D G3DSA:2.150.10.10 2654 2761 4.1E-11 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 Gene3D G3DSA:2.150.10.10 2146 2382 7.9E-9 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 SUPERFAMILY SSF51120 2163 2284 3.01E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 SUPERFAMILY SSF69318 1791 2059 2.35E-17 T 22-04-2016 YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 SUPERFAMILY SSF51120 2652 2762 2.88E-8 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 SUPERFAMILY SSF51120 2493 2575 3.01E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 PANTHER PTHR36921 1261 2846 0.0 T 22-04-2016 YPO0947 92d8f6aded4e4e762b40af977bba9f86 3110 PANTHER PTHR36921 1 1238 0.0 T 22-04-2016 YPO1947 0f71c391e259d27f3c4909e55e050f13 165 PANTHER PTHR10681 22 149 9.0E-24 T 22-04-2016 YPO1947 0f71c391e259d27f3c4909e55e050f13 165 Gene3D G3DSA:3.40.30.10 5 163 7.1E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1947 0f71c391e259d27f3c4909e55e050f13 165 SUPERFAMILY SSF52833 25 161 1.68E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO1947 0f71c391e259d27f3c4909e55e050f13 165 Pfam PF00578 AhpC/TSA family 28 141 1.6E-19 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 YPO0932 61b2639dc9ac3b6fb53f5221bf9f2994 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 41.939 T 22-04-2016 IPR023483 Uncharacterised protein family SprT YPO0932 61b2639dc9ac3b6fb53f5221bf9f2994 170 Pfam PF10263 SprT-like family 21 165 8.1E-28 T 22-04-2016 IPR006640 SprT-like YPO0932 61b2639dc9ac3b6fb53f5221bf9f2994 170 PANTHER PTHR38773 2 170 5.9E-97 T 22-04-2016 YPO0932 61b2639dc9ac3b6fb53f5221bf9f2994 170 SMART SM00731 16 165 2.8E-69 T 22-04-2016 IPR006640 SprT-like YPO1544 6377f52f90382ea2df5efac1bbe4999c 245 SUPERFAMILY SSF51366 1 242 6.53E-66 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YPO1544 6377f52f90382ea2df5efac1bbe4999c 245 PANTHER PTHR21235 1 244 1.6E-116 T 22-04-2016 YPO1544 6377f52f90382ea2df5efac1bbe4999c 245 PANTHER PTHR21235:SF15 1 244 1.6E-116 T 22-04-2016 YPO1544 6377f52f90382ea2df5efac1bbe4999c 245 Pfam PF00977 Histidine biosynthesis protein 1 233 3.3E-77 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 YPO1544 6377f52f90382ea2df5efac1bbe4999c 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.291 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 YPO1544 6377f52f90382ea2df5efac1bbe4999c 245 Gene3D G3DSA:3.20.20.70 1 243 4.7E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1544 6377f52f90382ea2df5efac1bbe4999c 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 3.9E-79 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 YPO2792 18909ad1adbcaea7c93b9c0127d475c0 126 Pfam PF06836 Protein of unknown function (DUF1240) 32 125 1.3E-40 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPO1465 5c8029e3e764a4574d8e45250e7af4db 166 PANTHER PTHR35850:SF2 1 166 1.3E-93 T 22-04-2016 YPO1465 5c8029e3e764a4574d8e45250e7af4db 166 PANTHER PTHR35850 1 166 1.3E-93 T 22-04-2016 YPO1465 5c8029e3e764a4574d8e45250e7af4db 166 PIRSF PIRSF028301 1 165 6.8E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO1465 5c8029e3e764a4574d8e45250e7af4db 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 2.2E-53 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO1465 5c8029e3e764a4574d8e45250e7af4db 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 158 2.0E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO1957 5b9249e7be1416a06c33128d9a16134b 262 PANTHER PTHR30473:SF3 1 262 2.8E-226 T 22-04-2016 YPO1957 5b9249e7be1416a06c33128d9a16134b 262 SUPERFAMILY SSF52540 57 239 7.09E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1957 5b9249e7be1416a06c33128d9a16134b 262 Pfam PF02562 PhoH-like protein 57 261 2.3E-77 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 YPO1957 5b9249e7be1416a06c33128d9a16134b 262 PANTHER PTHR30473 1 262 2.8E-226 T 22-04-2016 YPO1957 5b9249e7be1416a06c33128d9a16134b 262 Gene3D G3DSA:3.40.50.300 57 261 1.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 Gene3D G3DSA:1.10.287.990 20 82 3.9E-24 T 22-04-2016 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 PIRSF PIRSF000349 1 192 2.3E-86 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 PANTHER PTHR11404:SF8 1 192 1.8E-110 T 22-04-2016 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 3.3E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 4.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.6E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 SUPERFAMILY SSF54719 82 191 1.15E-44 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 SUPERFAMILY SSF46609 1 83 3.27E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 PANTHER PTHR11404 1 192 1.8E-110 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2386 a520d20f90b788f77d3b54c991f1b1cc 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 6.2E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YPO2669 8c0a5580a2fd5f485556cbdb066bf7b6 228 PANTHER PTHR33620 1 228 1.3E-55 T 22-04-2016 YPO2669 8c0a5580a2fd5f485556cbdb066bf7b6 228 PIRSF PIRSF009467 2 228 3.7E-60 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YPO2669 8c0a5580a2fd5f485556cbdb066bf7b6 228 Pfam PF01730 UreF 37 185 2.1E-22 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YPO2669 8c0a5580a2fd5f485556cbdb066bf7b6 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 228 22.069 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YPO2706 85a549ccf3f5af4bae1fd26228deb64d 320 PANTHER PTHR35243 106 320 5.0E-44 T 22-04-2016 YPO2706 85a549ccf3f5af4bae1fd26228deb64d 320 Pfam PF11187 Protein of unknown function (DUF2974) 134 208 7.3E-5 T 22-04-2016 IPR024499 Protein of unknown function DUF2974 YPO2706 85a549ccf3f5af4bae1fd26228deb64d 320 PANTHER PTHR35243:SF2 106 320 5.0E-44 T 22-04-2016 YPO2706 85a549ccf3f5af4bae1fd26228deb64d 320 SUPERFAMILY SSF53474 87 229 1.39E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2706 85a549ccf3f5af4bae1fd26228deb64d 320 Gene3D G3DSA:3.40.50.1820 137 285 2.6E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0087 93b89324032f242f3a1073164b131315 144 Pfam PF05656 Protein of unknown function (DUF805) 7 132 5.7E-22 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 YPO0087 93b89324032f242f3a1073164b131315 144 PANTHER PTHR34980:SF1 1 143 2.3E-48 T 22-04-2016 YPO0087 93b89324032f242f3a1073164b131315 144 PANTHER PTHR34980 1 143 2.3E-48 T 22-04-2016 YPO3078 7787ccf3ff255e0d85b22454a4536a4f 809 PANTHER PTHR30287 1 800 6.1E-172 T 22-04-2016 YPO3078 7787ccf3ff255e0d85b22454a4536a4f 809 Pfam PF02687 FtsX-like permease family 247 364 8.5E-9 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPO3078 7787ccf3ff255e0d85b22454a4536a4f 809 Pfam PF02687 FtsX-like permease family 689 800 4.8E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YPO1771 5143178647af81c76bff67b2213baa99 454 Pfam PF03315 Serine dehydratase beta chain 3 155 1.2E-55 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 YPO1771 5143178647af81c76bff67b2213baa99 454 Gene3D G3DSA:3.30.1330.90 10 157 1.1E-54 T 22-04-2016 IPR029009 Allosteric substrate binding domain YPO1771 5143178647af81c76bff67b2213baa99 454 SUPERFAMILY SSF143548 16 157 2.33E-45 T 22-04-2016 IPR029009 Allosteric substrate binding domain YPO1771 5143178647af81c76bff67b2213baa99 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.1E-223 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 YPO1771 5143178647af81c76bff67b2213baa99 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 9.4E-97 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit YPO1771 5143178647af81c76bff67b2213baa99 454 PANTHER PTHR30182:SF4 2 453 0.0 T 22-04-2016 YPO1771 5143178647af81c76bff67b2213baa99 454 PANTHER PTHR30182 2 453 0.0 T 22-04-2016 YPO3168 016638a1b39311a059327744f581aef6 296 PANTHER PTHR11048 1 288 9.5E-160 T 22-04-2016 YPO3168 016638a1b39311a059327744f581aef6 296 Pfam PF01040 UbiA prenyltransferase family 19 267 1.8E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 YPO3168 016638a1b39311a059327744f581aef6 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 2.3E-91 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 YPO3168 016638a1b39311a059327744f581aef6 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site YPO3168 016638a1b39311a059327744f581aef6 296 PANTHER PTHR11048:SF20 1 288 9.5E-160 T 22-04-2016 YPO3168 016638a1b39311a059327744f581aef6 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 18.338 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 YPO3761 be3f866ea3256aad93926d701766fb6d 177 Gene3D G3DSA:3.40.50.360 2 72 1.7E-24 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO3761 be3f866ea3256aad93926d701766fb6d 177 Gene3D G3DSA:3.40.50.360 104 174 1.7E-24 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO3761 be3f866ea3256aad93926d701766fb6d 177 Pfam PF12724 Flavodoxin domain 4 151 1.2E-56 T 22-04-2016 IPR026816 Flavodoxin domain YPO3761 be3f866ea3256aad93926d701766fb6d 177 PANTHER PTHR38030 1 173 1.3E-108 T 22-04-2016 YPO3761 be3f866ea3256aad93926d701766fb6d 177 PANTHER PTHR38030:SF2 1 173 1.3E-108 T 22-04-2016 YPO3761 be3f866ea3256aad93926d701766fb6d 177 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YPO3761 be3f866ea3256aad93926d701766fb6d 177 SUPERFAMILY SSF52218 1 169 5.9E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO3302 5a22e148cb1017a56fd3e53400828800 142 PANTHER PTHR30353 5 142 1.9E-57 T 22-04-2016 IPR032818 DedA family YPO3302 5a22e148cb1017a56fd3e53400828800 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 10 109 2.0E-4 T 22-04-2016 IPR020143 Uncharacterised protein family, RP436 YPO3302 5a22e148cb1017a56fd3e53400828800 142 PANTHER PTHR30353:SF12 5 142 1.9E-57 T 22-04-2016 YPO3069 93984151e54ae59700665a06ca9ef6ef 486 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 481 31.299 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 YPO3069 93984151e54ae59700665a06ca9ef6ef 486 Gene3D G3DSA:1.25.40.10 306 453 5.0E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3069 93984151e54ae59700665a06ca9ef6ef 486 Pfam PF07720 Tetratricopeptide repeat 314 331 0.023 T 22-04-2016 IPR011716 Tetratricopeptide TPR-3 YPO3069 93984151e54ae59700665a06ca9ef6ef 486 PANTHER PTHR22726:SF10 27 349 2.6E-138 T 22-04-2016 YPO3069 93984151e54ae59700665a06ca9ef6ef 486 Pfam PF14559 Tetratricopeptide repeat 352 417 7.6E-8 T 22-04-2016 YPO3069 93984151e54ae59700665a06ca9ef6ef 486 Gene3D G3DSA:3.30.2010.10 66 148 1.7E-17 T 22-04-2016 YPO3069 93984151e54ae59700665a06ca9ef6ef 486 Pfam PF01435 Peptidase family M48 70 257 1.1E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YPO3069 93984151e54ae59700665a06ca9ef6ef 486 SUPERFAMILY SSF48452 307 432 2.31E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3069 93984151e54ae59700665a06ca9ef6ef 486 PANTHER PTHR22726 27 349 2.6E-138 T 22-04-2016 YPO1367 133e1570fd1e3e05e6402820997ef677 106 SUPERFAMILY SSF54736 21 105 5.23E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPO1367 133e1570fd1e3e05e6402820997ef677 106 Gene3D G3DSA:3.30.1390.10 4 106 3.7E-44 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPO1367 133e1570fd1e3e05e6402820997ef677 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 21 101 28.223 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YPO1367 133e1570fd1e3e05e6402820997ef677 106 PANTHER PTHR33473 1 106 2.6E-46 T 22-04-2016 YPO1367 133e1570fd1e3e05e6402820997ef677 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 7.5E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 YPO2160 3de3e9f7e6bc071032c4a935e9bc8869 215 Gene3D G3DSA:3.40.50.850 1 210 2.2E-64 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YPO2160 3de3e9f7e6bc071032c4a935e9bc8869 215 SUPERFAMILY SSF52499 2 211 1.16E-53 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YPO2160 3de3e9f7e6bc071032c4a935e9bc8869 215 PANTHER PTHR11080:SF2 1 215 3.9E-68 T 22-04-2016 YPO2160 3de3e9f7e6bc071032c4a935e9bc8869 215 PANTHER PTHR11080 1 215 3.9E-68 T 22-04-2016 YPO2160 3de3e9f7e6bc071032c4a935e9bc8869 215 Pfam PF00857 Isochorismatase family 4 205 3.0E-36 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YPO1430 2b2e469676390c734d470eee4b73bb4e 172 SUPERFAMILY SSF54637 3 169 4.97E-56 T 22-04-2016 IPR029069 HotDog domain YPO1430 2b2e469676390c734d470eee4b73bb4e 172 Gene3D G3DSA:3.10.129.10 2 169 1.0E-60 T 22-04-2016 IPR029069 HotDog domain YPO1430 2b2e469676390c734d470eee4b73bb4e 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.068 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPO1430 2b2e469676390c734d470eee4b73bb4e 172 Pfam PF07977 FabA-like domain 29 158 1.5E-52 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YPO1430 2b2e469676390c734d470eee4b73bb4e 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.9E-93 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YPO0904 05562fe16a978ff22cee7c73b2d5b5ac 145 Pfam PF13924 Lipocalin-like domain 7 143 6.7E-45 T 22-04-2016 IPR024311 Lipocalin-like domain YPO1575 edc67ee8259021f7cedd82a1b8fb1d83 170 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 1 170 5.1E-54 T 22-04-2016 IPR018636 Protein of unknown function DUF2058 YPO3995 36386217cef3b2c085f2ae8fe3df33c5 234 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 234 7.9E-79 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin YPO3995 36386217cef3b2c085f2ae8fe3df33c5 234 PANTHER PTHR38105:SF1 1 234 6.0E-136 T 22-04-2016 YPO3995 36386217cef3b2c085f2ae8fe3df33c5 234 SUPERFAMILY SSF56935 53 234 3.66E-10 T 22-04-2016 YPO3995 36386217cef3b2c085f2ae8fe3df33c5 234 Gene3D G3DSA:2.40.230.30 22 234 5.7E-69 T 22-04-2016 YPO3995 36386217cef3b2c085f2ae8fe3df33c5 234 PANTHER PTHR38105 1 234 6.0E-136 T 22-04-2016 YPO1606 91da0ff5075e9e7b233ee25d94e8860c 340 PANTHER PTHR11669:SF8 12 330 2.1E-180 T 22-04-2016 YPO1606 91da0ff5075e9e7b233ee25d94e8860c 340 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 205 7.0E-63 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO1606 91da0ff5075e9e7b233ee25d94e8860c 340 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 212 327 1.4E-41 T 22-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YPO1606 91da0ff5075e9e7b233ee25d94e8860c 340 Gene3D G3DSA:1.20.272.10 213 333 7.7E-44 T 22-04-2016 YPO1606 91da0ff5075e9e7b233ee25d94e8860c 340 Gene3D G3DSA:3.40.50.300 4 164 8.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1606 91da0ff5075e9e7b233ee25d94e8860c 340 SUPERFAMILY SSF52540 1 211 7.18E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1606 91da0ff5075e9e7b233ee25d94e8860c 340 PANTHER PTHR11669 12 330 2.1E-180 T 22-04-2016 YPO1606 91da0ff5075e9e7b233ee25d94e8860c 340 Pfam PF13177 DNA polymerase III, delta subunit 9 161 7.8E-41 T 22-04-2016 YPO1606 91da0ff5075e9e7b233ee25d94e8860c 340 SUPERFAMILY SSF48019 213 334 2.38E-36 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YPO0377 45b540ebaed1f44287cd191e672f54e6 66 PANTHER PTHR38602:SF1 1 64 3.9E-25 T 22-04-2016 YPO0377 45b540ebaed1f44287cd191e672f54e6 66 PANTHER PTHR38602 1 64 3.9E-25 T 22-04-2016 YPO0377 45b540ebaed1f44287cd191e672f54e6 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 2.5E-22 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 YPO3595 7ca9a99246759a2156347b755940c830 438 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 8 431 2.0E-112 T 22-04-2016 IPR017735 Type VI secretion system, FHA domain-containing protein YPO3595 7ca9a99246759a2156347b755940c830 438 SUPERFAMILY SSF49879 29 104 1.77E-5 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 YPO3405 762ff53bf9e81eb677881798a57551e5 256 PANTHER PTHR30413 3 255 3.2E-165 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPO3405 762ff53bf9e81eb677881798a57551e5 256 PANTHER PTHR30413:SF2 3 255 3.2E-165 T 22-04-2016 YPO3405 762ff53bf9e81eb677881798a57551e5 256 Pfam PF01061 ABC-2 type transporter 9 218 2.6E-37 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 YPO3405 762ff53bf9e81eb677881798a57551e5 256 PIRSF PIRSF006648 8 253 1.8E-24 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPO3405 762ff53bf9e81eb677881798a57551e5 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.7E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPO3405 762ff53bf9e81eb677881798a57551e5 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.7E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPO3405 762ff53bf9e81eb677881798a57551e5 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.7E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 Gene3D G3DSA:3.40.50.720 4 226 1.1E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 Pfam PF00106 short chain dehydrogenase 7 187 4.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 SUPERFAMILY SSF51735 6 226 6.47E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.7E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 PANTHER PTHR24322:SF343 10 128 9.2E-73 T 22-04-2016 YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 PANTHER PTHR24322:SF343 148 180 9.2E-73 T 22-04-2016 YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 PANTHER PTHR24322 10 128 9.2E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3199 c3edf8e2445c179dcb8c1cbb33a63c51 226 PANTHER PTHR24322 148 180 9.2E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 PANTHER PTHR30562 1 488 0.0 T 22-04-2016 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 8.4E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 8.4E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 8.4E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 8.4E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 Gene3D G3DSA:1.10.1040.10 282 488 3.4E-75 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 SUPERFAMILY SSF48179 283 487 9.18E-66 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 Gene3D G3DSA:3.40.50.720 6 281 1.2E-106 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 SUPERFAMILY SSF51735 3 282 5.12E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 463 3.5E-95 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 PANTHER PTHR30562:SF7 1 488 0.0 T 22-04-2016 YPO1280 7fa747b45bf9a1d6a4776fb10b54cf65 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 7.5E-42 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YPO3716 68fad138996df6310278ae767dae9920 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 6.5E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3716 68fad138996df6310278ae767dae9920 296 PANTHER PTHR32243 3 296 1.2E-145 T 22-04-2016 YPO3716 68fad138996df6310278ae767dae9920 296 SUPERFAMILY SSF161098 8 296 1.96E-68 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3716 68fad138996df6310278ae767dae9920 296 Gene3D G3DSA:1.10.3720.10 5 283 1.0E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3716 68fad138996df6310278ae767dae9920 296 PANTHER PTHR32243:SF4 3 296 1.2E-145 T 22-04-2016 YPO3480 15c0e4db20093ab3bb5ffcacc310d107 292 PANTHER PTHR30217:SF8 1 292 3.5E-221 T 22-04-2016 YPO3480 15c0e4db20093ab3bb5ffcacc310d107 292 Pfam PF01136 Peptidase family U32 92 209 1.3E-11 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO3480 15c0e4db20093ab3bb5ffcacc310d107 292 PANTHER PTHR30217 1 292 3.5E-221 T 22-04-2016 YPO0781 0a7d7772c57c4994e2dd94d3917e546d 116 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 5.4E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO0781 0a7d7772c57c4994e2dd94d3917e546d 116 SUPERFAMILY SSF54523 21 95 7.85E-13 T 22-04-2016 YPO0612 f1ae9e0a782554b887c0b0b3288bf273 414 Gene3D G3DSA:3.40.190.10 127 348 4.7E-30 T 22-04-2016 YPO0612 f1ae9e0a782554b887c0b0b3288bf273 414 PANTHER PTHR30061 1 414 3.1E-69 T 22-04-2016 YPO0612 f1ae9e0a782554b887c0b0b3288bf273 414 Pfam PF01547 Bacterial extracellular solute-binding protein 34 324 1.2E-25 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YPO0612 f1ae9e0a782554b887c0b0b3288bf273 414 PANTHER PTHR30061:SF1 1 414 3.1E-69 T 22-04-2016 YPO0612 f1ae9e0a782554b887c0b0b3288bf273 414 SUPERFAMILY SSF53850 22 411 2.72E-46 T 22-04-2016 YPO0187 e389ec1ebe26cda5ea1cdfc81ed5c529 329 Gene3D G3DSA:3.90.550.10 2 205 1.3E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO0187 e389ec1ebe26cda5ea1cdfc81ed5c529 329 SUPERFAMILY SSF53448 6 232 4.36E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO0187 e389ec1ebe26cda5ea1cdfc81ed5c529 329 Pfam PF00535 Glycosyl transferase family 2 7 134 7.6E-30 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPO0187 e389ec1ebe26cda5ea1cdfc81ed5c529 329 PANTHER PTHR22916:SF17 1 314 9.2E-107 T 22-04-2016 YPO0187 e389ec1ebe26cda5ea1cdfc81ed5c529 329 PANTHER PTHR22916 1 314 9.2E-107 T 22-04-2016 YPO1710 e66bd506189858e93c24a05368bc0e70 387 PANTHER PTHR33420 93 387 2.7E-192 T 22-04-2016 YPO1710 e66bd506189858e93c24a05368bc0e70 387 SUPERFAMILY SSF49401 251 386 1.29E-21 T 22-04-2016 IPR008966 Adhesion domain YPO1710 e66bd506189858e93c24a05368bc0e70 387 Pfam PF00419 Fimbrial protein 249 386 2.4E-13 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO1710 e66bd506189858e93c24a05368bc0e70 387 Gene3D G3DSA:2.60.40.1090 251 387 3.1E-20 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO1710 e66bd506189858e93c24a05368bc0e70 387 PANTHER PTHR33420:SF1 93 387 2.7E-192 T 22-04-2016 YPO1755 eca189c194d2d1dbdafd73a1e618fedb 153 PIRSF PIRSF020687 1 152 1.8E-73 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YPO1755 eca189c194d2d1dbdafd73a1e618fedb 153 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 144 2.0E-57 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YPO1755 eca189c194d2d1dbdafd73a1e618fedb 153 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 33.576 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YPO1755 eca189c194d2d1dbdafd73a1e618fedb 153 Pfam PF06173 Protein of unknown function (DUF986) 4 151 4.1E-66 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YPO0085 8bf821008795b685ed755a8dab024242 255 Gene3D G3DSA:3.20.20.70 1 251 7.8E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO0085 8bf821008795b685ed755a8dab024242 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.5E-95 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPO0085 8bf821008795b685ed755a8dab024242 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPO0085 8bf821008795b685ed755a8dab024242 255 PANTHER PTHR21139 1 255 4.2E-132 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPO0085 8bf821008795b685ed755a8dab024242 255 Pfam PF00121 Triosephosphate isomerase 5 246 4.7E-92 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPO0085 8bf821008795b685ed755a8dab024242 255 SUPERFAMILY SSF51351 1 250 2.23E-90 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPO0085 8bf821008795b685ed755a8dab024242 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.301 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YPO2507 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 PANTHER PTHR22911:SF37 8 294 2.4E-119 T 22-04-2016 YPO2507 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 PANTHER PTHR22911 8 294 2.4E-119 T 22-04-2016 YPO2507 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 Pfam PF00892 EamA-like transporter family 150 279 1.1E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO2507 aa6b1ae1d02cee1bbd612d5ded44c0dc 295 SUPERFAMILY SSF103481 187 281 9.02E-7 T 22-04-2016 YPO2581 ec3fb978818ce036a4ff329ee1dd94f4 309 Pfam PF13407 Periplasmic binding protein domain 24 277 1.0E-54 T 22-04-2016 IPR025997 Periplasmic binding protein YPO2581 ec3fb978818ce036a4ff329ee1dd94f4 309 PANTHER PTHR32196:SF31 13 262 2.1E-116 T 22-04-2016 YPO2581 ec3fb978818ce036a4ff329ee1dd94f4 309 PANTHER PTHR32196 13 262 2.1E-116 T 22-04-2016 YPO2581 ec3fb978818ce036a4ff329ee1dd94f4 309 SUPERFAMILY SSF53822 22 300 5.65E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO2581 ec3fb978818ce036a4ff329ee1dd94f4 309 Gene3D G3DSA:3.40.50.2300 23 139 5.4E-31 T 22-04-2016 YPO2581 ec3fb978818ce036a4ff329ee1dd94f4 309 Gene3D G3DSA:3.40.50.2300 140 300 2.6E-43 T 22-04-2016 YPO1145 ac4de76645876135c98894a466816851 259 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 36 255 1.7E-79 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 YPO1145 ac4de76645876135c98894a466816851 259 Pfam PF13531 Bacterial extracellular solute-binding protein 31 256 5.9E-46 T 22-04-2016 YPO1145 ac4de76645876135c98894a466816851 259 Gene3D G3DSA:3.40.190.10 219 259 9.1E-15 T 22-04-2016 YPO1145 ac4de76645876135c98894a466816851 259 Gene3D G3DSA:3.40.190.10 30 111 9.1E-15 T 22-04-2016 YPO1145 ac4de76645876135c98894a466816851 259 PIRSF PIRSF004846 2 259 1.1E-77 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 YPO1145 ac4de76645876135c98894a466816851 259 SUPERFAMILY SSF53850 29 258 1.14E-68 T 22-04-2016 YPO1145 ac4de76645876135c98894a466816851 259 PANTHER PTHR30632 8 258 2.4E-77 T 22-04-2016 YPO1145 ac4de76645876135c98894a466816851 259 Gene3D G3DSA:3.40.190.10 112 218 2.3E-44 T 22-04-2016 YPO1145 ac4de76645876135c98894a466816851 259 PANTHER PTHR30632:SF0 8 258 2.4E-77 T 22-04-2016 YPO3894 97869ff059a0c803867a6ad8611ade31 160 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 9 158 7.6E-64 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPO1994 337a682c39559e7759db4c7d6b9075c5 316 SUPERFAMILY SSF51182 27 204 6.52E-9 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO1958 ae9751440d88d1456a579271f9a3770b 366 Pfam PF01699 Sodium/calcium exchanger protein 42 192 2.9E-13 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YPO1958 ae9751440d88d1456a579271f9a3770b 366 Pfam PF01699 Sodium/calcium exchanger protein 223 363 1.7E-7 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YPO1958 ae9751440d88d1456a579271f9a3770b 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 11 364 7.7E-103 T 22-04-2016 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 YPO1958 ae9751440d88d1456a579271f9a3770b 366 PANTHER PTHR37958:SF1 7 366 1.2E-129 T 22-04-2016 YPO1958 ae9751440d88d1456a579271f9a3770b 366 PANTHER PTHR37958 7 366 1.2E-129 T 22-04-2016 YPO2031 1d0a7cd665114783f19a2ee797cb47c9 288 Gene3D G3DSA:1.10.3720.10 4 272 6.7E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2031 1d0a7cd665114783f19a2ee797cb47c9 288 PANTHER PTHR30193:SF10 1 288 1.3E-93 T 22-04-2016 YPO2031 1d0a7cd665114783f19a2ee797cb47c9 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 279 1.4E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2031 1d0a7cd665114783f19a2ee797cb47c9 288 PANTHER PTHR30193 1 288 1.3E-93 T 22-04-2016 YPO2031 1d0a7cd665114783f19a2ee797cb47c9 288 SUPERFAMILY SSF161098 50 272 2.75E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1088 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 PIRSF PIRSF000980 1 1123 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 SUPERFAMILY SSF52540 370 811 1.38E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 PANTHER PTHR30591 1 1106 0.0 T 22-04-2016 YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 Gene3D G3DSA:1.10.10.160 86 184 7.2E-32 T 22-04-2016 IPR013986 DExx box DNA helicase domain YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 SUPERFAMILY SSF52540 1 347 1.43E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 PANTHER PTHR30591:SF1 1 1106 0.0 T 22-04-2016 YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 1.7E-301 T 22-04-2016 YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 Gene3D G3DSA:3.40.50.300 657 753 1.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 Gene3D G3DSA:3.40.50.300 364 455 1.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 SUPERFAMILY SSF52980 819 1121 4.83E-98 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YPO1018 d790adfeda3d66030255c6cd36ca059f 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1123 13.601 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YPO0946 a6d3ae5121b2c3cb2bb2be501962fbae 376 PANTHER PTHR13932 5 376 3.5E-229 T 22-04-2016 YPO0946 a6d3ae5121b2c3cb2bb2be501962fbae 376 SUPERFAMILY SSF102114 5 376 1.96E-107 T 22-04-2016 YPO0946 a6d3ae5121b2c3cb2bb2be501962fbae 376 PANTHER PTHR13932:SF7 5 376 3.5E-229 T 22-04-2016 YPO0946 a6d3ae5121b2c3cb2bb2be501962fbae 376 Pfam PF04055 Radical SAM superfamily 11 179 1.5E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO0946 a6d3ae5121b2c3cb2bb2be501962fbae 376 SMART SM00729 6 223 3.6E-49 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPO0946 a6d3ae5121b2c3cb2bb2be501962fbae 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 1.8E-139 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- YPO0946 a6d3ae5121b2c3cb2bb2be501962fbae 376 Gene3D G3DSA:3.80.30.20 7 238 1.0E-27 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YPO0946 a6d3ae5121b2c3cb2bb2be501962fbae 376 Pfam PF06969 HemN C-terminal domain 306 364 4.7E-8 T 22-04-2016 IPR010723 HemN, C-terminal YPO2574 0ae44332cbe199ba7613458cd03399be 184 Pfam PF07274 Protein of unknown function (DUF1440) 22 165 1.4E-43 T 22-04-2016 IPR009898 Protein of unknown function DUF1440 YPO3149 43c0a970713d6d6585e786c2a2d00031 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 348 5.2E-17 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPO3149 43c0a970713d6d6585e786c2a2d00031 567 SUPERFAMILY SSF53850 122 562 1.1E-50 T 22-04-2016 YPO3149 43c0a970713d6d6585e786c2a2d00031 567 PANTHER PTHR30290 22 81 0.0 T 22-04-2016 YPO3149 43c0a970713d6d6585e786c2a2d00031 567 PANTHER PTHR30290 120 565 0.0 T 22-04-2016 YPO3149 43c0a970713d6d6585e786c2a2d00031 567 PANTHER PTHR30290:SF19 22 81 0.0 T 22-04-2016 YPO3149 43c0a970713d6d6585e786c2a2d00031 567 PANTHER PTHR30290:SF19 120 565 0.0 T 22-04-2016 YPO3149 43c0a970713d6d6585e786c2a2d00031 567 Gene3D G3DSA:3.90.76.10 131 274 8.4E-20 T 22-04-2016 YPO3149 43c0a970713d6d6585e786c2a2d00031 567 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 3.3E-39 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPO1927 fc418a1a2d9f4998456ad0c66e0ec467 180 Gene3D G3DSA:3.10.129.10 23 171 2.1E-44 T 22-04-2016 IPR029069 HotDog domain YPO1927 fc418a1a2d9f4998456ad0c66e0ec467 180 Pfam PF01575 MaoC like domain 33 145 1.9E-18 T 22-04-2016 IPR002539 MaoC-like domain YPO1927 fc418a1a2d9f4998456ad0c66e0ec467 180 PANTHER PTHR13078 1 176 2.4E-88 T 22-04-2016 YPO1927 fc418a1a2d9f4998456ad0c66e0ec467 180 SUPERFAMILY SSF54637 21 172 3.32E-46 T 22-04-2016 IPR029069 HotDog domain YPO3632 fa2b195855540b207d426bab3c0d74aa 306 PANTHER PTHR30606:SF7 2 306 1.6E-244 T 22-04-2016 YPO3632 fa2b195855540b207d426bab3c0d74aa 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 2.8E-136 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YPO3632 fa2b195855540b207d426bab3c0d74aa 306 PIRSF PIRSF026649 3 306 7.4E-93 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPO3632 fa2b195855540b207d426bab3c0d74aa 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 68.758 T 22-04-2016 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YPO3632 fa2b195855540b207d426bab3c0d74aa 306 PANTHER PTHR30606 2 306 1.6E-244 T 22-04-2016 YPO3632 fa2b195855540b207d426bab3c0d74aa 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.425 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YPO3632 fa2b195855540b207d426bab3c0d74aa 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 1.3E-101 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YPO3457 60f4ccaef790df74807f44f49d430e34 158 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 157 6.1E-54 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 YPO3457 60f4ccaef790df74807f44f49d430e34 158 Pfam PF06754 Phosphonate metabolism protein PhnG 7 156 1.8E-51 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 YPO1580 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 PRINTS PR01399 Enterobactin synthetase component D signature 60 80 2.1E-7 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 YPO1580 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 2.1E-7 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 YPO1580 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 Gene3D G3DSA:3.90.470.20 130 204 4.5E-6 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO1580 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 PANTHER PTHR38096 1 246 3.9E-82 T 22-04-2016 YPO1580 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 131 201 1.8E-11 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO1580 f1cb03d8e5bfcc94f86d5782b1e0a37e 246 SUPERFAMILY SSF56214 130 205 2.62E-14 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YPO3017 c8c6caae04fc40ae432b99daaaa658ac 292 Pfam PF01380 SIS domain 139 265 2.9E-20 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO3017 c8c6caae04fc40ae432b99daaaa658ac 292 Gene3D G3DSA:1.10.10.10 12 87 1.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3017 c8c6caae04fc40ae432b99daaaa658ac 292 SUPERFAMILY SSF53697 105 289 3.4E-43 T 22-04-2016 YPO3017 c8c6caae04fc40ae432b99daaaa658ac 292 Gene3D G3DSA:3.40.50.10490 119 275 7.1E-43 T 22-04-2016 YPO3017 c8c6caae04fc40ae432b99daaaa658ac 292 SUPERFAMILY SSF46689 12 87 1.25E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3017 c8c6caae04fc40ae432b99daaaa658ac 292 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 86 4.3E-23 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YPO3017 c8c6caae04fc40ae432b99daaaa658ac 292 PANTHER PTHR30514 12 282 8.2E-109 T 22-04-2016 YPO3017 c8c6caae04fc40ae432b99daaaa658ac 292 PANTHER PTHR30514:SF1 12 282 8.2E-109 T 22-04-2016 YPO0128 ad401ba1a963b57f1984f4d6a7a1da9a 233 Gene3D G3DSA:3.40.50.2020 50 232 4.0E-25 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO0128 ad401ba1a963b57f1984f4d6a7a1da9a 233 PANTHER PTHR11907:SF9 1 233 3.3E-79 T 22-04-2016 YPO0128 ad401ba1a963b57f1984f4d6a7a1da9a 233 Pfam PF00156 Phosphoribosyl transferase domain 143 229 3.0E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YPO0128 ad401ba1a963b57f1984f4d6a7a1da9a 233 PANTHER PTHR11907 1 233 3.3E-79 T 22-04-2016 YPO0128 ad401ba1a963b57f1984f4d6a7a1da9a 233 SUPERFAMILY SSF53271 46 231 1.31E-33 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YPO0648 814043820431b8a1da61e983a23c12c1 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 4.0E-40 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPO0648 814043820431b8a1da61e983a23c12c1 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.9E-31 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPO0648 814043820431b8a1da61e983a23c12c1 119 Gene3D G3DSA:3.30.1130.10 1 115 1.1E-42 T 22-04-2016 YPO0648 814043820431b8a1da61e983a23c12c1 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 5.4E-28 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPO0648 814043820431b8a1da61e983a23c12c1 119 SUPERFAMILY SSF55620 1 115 1.67E-36 T 22-04-2016 YPO0648 814043820431b8a1da61e983a23c12c1 119 SMART SM00905 4 114 3.5E-47 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YPO0648 814043820431b8a1da61e983a23c12c1 119 PANTHER PTHR20941 1 117 3.4E-38 T 22-04-2016 YPO0337 b86a7f3a413f01b980824643ef677b97 141 SUPERFAMILY SSF50203 19 130 1.23E-40 T 22-04-2016 IPR008992 Enterotoxin GO:0009405 YPO0337 b86a7f3a413f01b980824643ef677b97 141 Gene3D G3DSA:2.40.50.110 20 128 6.0E-22 T 22-04-2016 YPO0288 77a9afe418efb35ceecb3687b44115ef 162 Gene3D G3DSA:1.10.10.10 12 81 9.9E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0288 77a9afe418efb35ceecb3687b44115ef 162 PIRSF PIRSF030837 1 161 2.1E-87 T 22-04-2016 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YPO0288 77a9afe418efb35ceecb3687b44115ef 162 SUPERFAMILY SSF46785 9 86 3.97E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2687 a6775f88d4835f7d8a90dc4ff8a02fab 142 SUPERFAMILY SSF103481 41 141 2.48E-14 T 22-04-2016 YPO2687 a6775f88d4835f7d8a90dc4ff8a02fab 142 Pfam PF00892 EamA-like transporter family 4 140 2.6E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO2687 a6775f88d4835f7d8a90dc4ff8a02fab 142 PANTHER PTHR22911 4 140 6.3E-28 T 22-04-2016 YPO2776 afd5a9953aee8dc9b34ecbb49c298b39 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 1.7E-14 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO2776 afd5a9953aee8dc9b34ecbb49c298b39 238 PANTHER PTHR30450:SF5 1 237 2.2E-194 T 22-04-2016 YPO2776 afd5a9953aee8dc9b34ecbb49c298b39 238 SUPERFAMILY SSF161098 17 214 1.96E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2776 afd5a9953aee8dc9b34ecbb49c298b39 238 PANTHER PTHR30450 1 237 2.2E-194 T 22-04-2016 YPO2776 afd5a9953aee8dc9b34ecbb49c298b39 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 227 7.3E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2776 afd5a9953aee8dc9b34ecbb49c298b39 238 Gene3D G3DSA:1.10.3720.10 18 228 3.7E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1061 1d66b92fb90f5ffd35c987a7998a6f8c 132 SUPERFAMILY SSF54593 4 129 1.17E-31 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO1061 1d66b92fb90f5ffd35c987a7998a6f8c 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 5.0E-21 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPO1061 1d66b92fb90f5ffd35c987a7998a6f8c 132 Gene3D G3DSA:3.10.180.10 4 128 2.5E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO3026 e8aaf3cfbb997d1931b5a7516be4e5b9 203 Gene3D G3DSA:2.60.460.10 32 200 2.0E-76 T 22-04-2016 YPO3026 e8aaf3cfbb997d1931b5a7516be4e5b9 203 Pfam PF06572 Protein of unknown function (DUF1131) 30 199 9.7E-83 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 YPO3026 e8aaf3cfbb997d1931b5a7516be4e5b9 203 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 24 199 6.0E-101 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 PANTHER PTHR10566 1 458 0.0 T 22-04-2016 YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 Pfam PF03109 ABC1 family 113 231 4.2E-34 T 22-04-2016 IPR004147 UbiB domain YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.0E-178 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 Gene3D G3DSA:3.90.1200.10 251 296 8.6E-4 T 22-04-2016 YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 PANTHER PTHR10566:SF79 1 458 0.0 T 22-04-2016 YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.256 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 SUPERFAMILY SSF56112 94 158 1.59E-45 T 22-04-2016 IPR011009 Protein kinase-like domain YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 SUPERFAMILY SSF56112 193 435 1.59E-45 T 22-04-2016 IPR011009 Protein kinase-like domain YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 Gene3D G3DSA:3.30.200.20 192 227 5.3E-4 T 22-04-2016 YPO3779 a3d6826e5d0a2a10827181b175a7d273 543 Gene3D G3DSA:3.30.200.20 128 156 5.3E-4 T 22-04-2016 YPO2222 c05657f5b446b40adc9977c9af1cefa4 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 47.897 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YPO2222 c05657f5b446b40adc9977c9af1cefa4 196 Pfam PF00925 GTP cyclohydrolase II 4 170 9.9E-67 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YPO2222 c05657f5b446b40adc9977c9af1cefa4 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 2.1E-92 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YPO2222 c05657f5b446b40adc9977c9af1cefa4 196 PANTHER PTHR21327:SF14 1 196 3.0E-146 T 22-04-2016 YPO2222 c05657f5b446b40adc9977c9af1cefa4 196 SUPERFAMILY SSF142695 3 173 3.66E-65 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YPO2222 c05657f5b446b40adc9977c9af1cefa4 196 PANTHER PTHR21327 1 196 3.0E-146 T 22-04-2016 YPO0053 ef19789d99961099f794035dd616540e 159 SUPERFAMILY SSF52374 4 155 1.02E-43 T 22-04-2016 YPO0053 ef19789d99961099f794035dd616540e 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.471 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPO0053 ef19789d99961099f794035dd616540e 159 Pfam PF01467 Cytidylyltransferase-like 6 134 5.4E-23 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPO0053 ef19789d99961099f794035dd616540e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 6.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPO0053 ef19789d99961099f794035dd616540e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 6.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPO0053 ef19789d99961099f794035dd616540e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 6.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPO0053 ef19789d99961099f794035dd616540e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 6.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPO0053 ef19789d99961099f794035dd616540e 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 6.8E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPO0053 ef19789d99961099f794035dd616540e 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 1.2E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YPO0053 ef19789d99961099f794035dd616540e 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 77 0.01 T 22-04-2016 YPO0053 ef19789d99961099f794035dd616540e 159 Gene3D G3DSA:3.40.50.620 3 157 4.9E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0053 ef19789d99961099f794035dd616540e 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 4.7E-58 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YPO0053 ef19789d99961099f794035dd616540e 159 PANTHER PTHR21342:SF1 1 159 2.0E-83 T 22-04-2016 YPO0053 ef19789d99961099f794035dd616540e 159 PANTHER PTHR21342 1 159 2.0E-83 T 22-04-2016 YPO4109 3f41accfdfcd2dd2588371c606ca9405 251 Gene3D G3DSA:1.10.3720.10 25 225 3.0E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4109 3f41accfdfcd2dd2588371c606ca9405 251 PANTHER PTHR30614 1 229 9.2E-161 T 22-04-2016 YPO4109 3f41accfdfcd2dd2588371c606ca9405 251 SUPERFAMILY SSF161098 22 209 2.09E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4109 3f41accfdfcd2dd2588371c606ca9405 251 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 116 2.0E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YPO4109 3f41accfdfcd2dd2588371c606ca9405 251 PANTHER PTHR30614:SF5 1 229 9.2E-161 T 22-04-2016 YPO4109 3f41accfdfcd2dd2588371c606ca9405 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 223 8.6E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1953 66c312f19b5fdbbe1c3c82d20c4a42fa 444 SUPERFAMILY SSF53448 68 344 6.88E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1953 66c312f19b5fdbbe1c3c82d20c4a42fa 444 Pfam PF00535 Glycosyl transferase family 2 78 245 3.3E-36 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YPO1953 66c312f19b5fdbbe1c3c82d20c4a42fa 444 Gene3D G3DSA:3.90.550.10 75 321 3.0E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1953 66c312f19b5fdbbe1c3c82d20c4a42fa 444 PANTHER PTHR10859 60 425 5.5E-179 T 22-04-2016 YPO1953 66c312f19b5fdbbe1c3c82d20c4a42fa 444 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 438 9.7E-193 T 22-04-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- YPO1953 66c312f19b5fdbbe1c3c82d20c4a42fa 444 PANTHER PTHR10859:SF92 60 425 5.5E-179 T 22-04-2016 YPO1784 5b2acd55de23bff5385453ae4cdd0754 128 Gene3D G3DSA:2.60.40.1220 30 128 2.4E-31 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like YPO1784 5b2acd55de23bff5385453ae4cdd0754 128 SUPERFAMILY SSF81296 30 128 3.01E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set YPO1784 5b2acd55de23bff5385453ae4cdd0754 128 Pfam PF04234 CopC domain 31 127 2.6E-24 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 YPO1784 5b2acd55de23bff5385453ae4cdd0754 128 PANTHER PTHR34820:SF1 5 127 1.6E-13 T 22-04-2016 IPR032694 Copper transport protein YcnJ GO:0006825 YPO1784 5b2acd55de23bff5385453ae4cdd0754 128 PANTHER PTHR34820 5 127 1.6E-13 T 22-04-2016 YPO3013 434b7f2b577874e36cc9be67b7fb69fe 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 1.2E-113 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 YPO3013 434b7f2b577874e36cc9be67b7fb69fe 291 PANTHER PTHR30406:SF1 1 283 2.9E-155 T 22-04-2016 YPO3013 434b7f2b577874e36cc9be67b7fb69fe 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 275 2.0E-106 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 YPO3013 434b7f2b577874e36cc9be67b7fb69fe 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 267 6.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3013 434b7f2b577874e36cc9be67b7fb69fe 291 Gene3D G3DSA:1.10.3720.10 19 275 3.7E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3013 434b7f2b577874e36cc9be67b7fb69fe 291 SUPERFAMILY SSF161098 16 268 2.09E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3013 434b7f2b577874e36cc9be67b7fb69fe 291 PANTHER PTHR30406 1 283 2.9E-155 T 22-04-2016 YPO3045 db42b06b84c28839747feb4283f5e185 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 168 7.5E-34 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPO1438 376024af99ebce676fa2cb2c0e16c4d2 712 PANTHER PTHR30509 3 711 0.0 T 22-04-2016 YPO1438 376024af99ebce676fa2cb2c0e16c4d2 712 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 707 6.3E-290 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK YPO1438 376024af99ebce676fa2cb2c0e16c4d2 712 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 1.4E-113 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal YPO1438 376024af99ebce676fa2cb2c0e16c4d2 712 PANTHER PTHR30509:SF8 3 711 0.0 T 22-04-2016 YPO1438 376024af99ebce676fa2cb2c0e16c4d2 712 Pfam PF13515 Fusaric acid resistance protein-like 408 527 3.7E-23 T 22-04-2016 YPO1438 376024af99ebce676fa2cb2c0e16c4d2 712 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 707 0.0 T 22-04-2016 IPR010019 Integral membrane protein, YccS YPO2416 636d6eb7a21d564145a86e4d75591ed9 128 SUPERFAMILY SSF103481 42 124 4.58E-11 T 22-04-2016 YPO2416 636d6eb7a21d564145a86e4d75591ed9 128 PANTHER PTHR30561:SF9 25 127 7.8E-13 T 22-04-2016 YPO2416 636d6eb7a21d564145a86e4d75591ed9 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 126 23.171 T 22-04-2016 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF UniPathway: UPA00030 YPO2416 636d6eb7a21d564145a86e4d75591ed9 128 PANTHER PTHR30561 25 127 7.8E-13 T 22-04-2016 YPO3474 92197327365c6e978ebb5eabf98fc44e 672 Pfam PF05426 Alginate lyase 101 267 1.1E-4 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPO3474 92197327365c6e978ebb5eabf98fc44e 672 SUPERFAMILY SSF48230 13 328 3.2E-35 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YPO3474 92197327365c6e978ebb5eabf98fc44e 672 Gene3D G3DSA:1.50.10.110 97 344 1.0E-16 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YPO3474 92197327365c6e978ebb5eabf98fc44e 672 Pfam PF07940 Heparinase II/III-like protein 368 515 2.9E-19 T 22-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 YPO3171 6388ce34e6b92dc843fc591adc4199a2 303 Gene3D G3DSA:1.10.1040.10 175 290 1.5E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YPO3171 6388ce34e6b92dc843fc591adc4199a2 303 PANTHER PTHR21708:SF24 1 294 2.7E-86 T 22-04-2016 YPO3171 6388ce34e6b92dc843fc591adc4199a2 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 290 4.4E-84 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YPO3171 6388ce34e6b92dc843fc591adc4199a2 303 SUPERFAMILY SSF48179 168 289 2.14E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YPO3171 6388ce34e6b92dc843fc591adc4199a2 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.5E-23 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YPO3171 6388ce34e6b92dc843fc591adc4199a2 303 Gene3D G3DSA:3.40.50.720 1 174 6.2E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3171 6388ce34e6b92dc843fc591adc4199a2 303 PANTHER PTHR21708 1 294 2.7E-86 T 22-04-2016 YPO3171 6388ce34e6b92dc843fc591adc4199a2 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 3.5E-35 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YPO3171 6388ce34e6b92dc843fc591adc4199a2 303 SUPERFAMILY SSF51735 1 167 7.99E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.581 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Pfam PF04055 Radical SAM superfamily 26 124 7.8E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PANTHER PTHR11228 1 54 2.0E-61 T 22-04-2016 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PANTHER PTHR11228 73 222 2.0E-61 T 22-04-2016 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PANTHER PTHR11228:SF6 1 54 2.0E-61 T 22-04-2016 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PANTHER PTHR11228:SF6 73 222 2.0E-61 T 22-04-2016 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 SUPERFAMILY SSF102114 24 117 9.42E-7 T 22-04-2016 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 PIRSF PIRSF000370 1 223 5.9E-71 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Gene3D G3DSA:3.20.20.70 29 122 2.0E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 8.1E-13 T 22-04-2016 YPO3374 9f3f53d6841cbdf7c2e7c5bf7e32c8e9 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 4.3E-112 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 YPO0959 e85a7541f731657dd616955b81074b15 319 SUPERFAMILY SSF53822 23 314 2.69E-61 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YPO0959 e85a7541f731657dd616955b81074b15 319 Gene3D G3DSA:3.40.50.2300 142 313 9.3E-43 T 22-04-2016 YPO0959 e85a7541f731657dd616955b81074b15 319 PANTHER PTHR32196 5 319 1.5E-101 T 22-04-2016 YPO0959 e85a7541f731657dd616955b81074b15 319 PANTHER PTHR32196:SF9 5 319 1.5E-101 T 22-04-2016 YPO0959 e85a7541f731657dd616955b81074b15 319 Pfam PF13407 Periplasmic binding protein domain 27 290 4.1E-40 T 22-04-2016 IPR025997 Periplasmic binding protein YPO0959 e85a7541f731657dd616955b81074b15 319 Gene3D G3DSA:3.40.50.2300 26 141 1.1E-22 T 22-04-2016 YPO1243 6e562ba9ce64535dbafd93a4b15155ac 122 Pfam PF10618 Phage tail tube protein 6 121 2.6E-42 T 22-04-2016 IPR019596 Bacteriophage Mu, GpM, tail tube YPO1697 6337442f81d7147f80128714089469d2 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 151 9.6E-19 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO1697 6337442f81d7147f80128714089469d2 250 PANTHER PTHR30251 1 241 2.0E-141 T 22-04-2016 YPO1697 6337442f81d7147f80128714089469d2 250 PANTHER PTHR30251:SF4 1 241 2.0E-141 T 22-04-2016 YPO1697 6337442f81d7147f80128714089469d2 250 Gene3D G3DSA:2.60.40.360 28 155 1.0E-19 T 22-04-2016 IPR008962 PapD-like YPO1697 6337442f81d7147f80128714089469d2 250 SUPERFAMILY SSF49354 23 154 7.85E-27 T 22-04-2016 IPR008962 PapD-like YPO0184 2e57084693774a09201c9463ee71007f 284 Gene3D G3DSA:1.10.3720.10 80 278 3.7E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0184 2e57084693774a09201c9463ee71007f 284 PANTHER PTHR30151:SF0 1 284 4.7E-135 T 22-04-2016 YPO0184 2e57084693774a09201c9463ee71007f 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 278 2.2E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0184 2e57084693774a09201c9463ee71007f 284 SUPERFAMILY SSF161098 84 266 3.27E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0184 2e57084693774a09201c9463ee71007f 284 PANTHER PTHR30151 1 284 4.7E-135 T 22-04-2016 YPO0374 65b49c3b2ade39042c587ef213491509 428 Gene3D G3DSA:3.40.50.300 197 361 3.6E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0374 65b49c3b2ade39042c587ef213491509 428 SUPERFAMILY SSF52540 197 375 1.69E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0374 65b49c3b2ade39042c587ef213491509 428 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 4.6E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal YPO0374 65b49c3b2ade39042c587ef213491509 428 SUPERFAMILY SSF54980 366 422 5.83E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YPO0374 65b49c3b2ade39042c587ef213491509 428 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.4 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YPO0374 65b49c3b2ade39042c587ef213491509 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.7E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO0374 65b49c3b2ade39042c587ef213491509 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.7E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO0374 65b49c3b2ade39042c587ef213491509 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.7E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO0374 65b49c3b2ade39042c587ef213491509 428 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.0E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YPO0374 65b49c3b2ade39042c587ef213491509 428 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.8E-151 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YPO0374 65b49c3b2ade39042c587ef213491509 428 PANTHER PTHR10229 1 428 1.2E-181 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YPO0374 65b49c3b2ade39042c587ef213491509 428 PIRSF PIRSF006809 3 422 8.4E-147 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YPO0374 65b49c3b2ade39042c587ef213491509 428 PANTHER PTHR10229:SF0 1 428 1.2E-181 T 22-04-2016 YPO0374 65b49c3b2ade39042c587ef213491509 428 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.3E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain YPO3695 19e4733791a7e5190cb5047a5d1557de 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.104 T 22-04-2016 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 YPO3695 19e4733791a7e5190cb5047a5d1557de 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 1.1E-17 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPO3695 19e4733791a7e5190cb5047a5d1557de 136 PANTHER PTHR30437:SF5 1 134 1.7E-71 T 22-04-2016 YPO3695 19e4733791a7e5190cb5047a5d1557de 136 Gene3D G3DSA:3.10.50.30 46 136 2.0E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YPO3695 19e4733791a7e5190cb5047a5d1557de 136 PANTHER PTHR30437 1 134 1.7E-71 T 22-04-2016 YPO3695 19e4733791a7e5190cb5047a5d1557de 136 Pfam PF14760 Rnk N-terminus 4 43 1.6E-12 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YPO3695 19e4733791a7e5190cb5047a5d1557de 136 SUPERFAMILY SSF54534 49 126 6.15E-18 T 22-04-2016 YPO3695 19e4733791a7e5190cb5047a5d1557de 136 Gene3D G3DSA:1.10.286.20 1 43 1.9E-17 T 22-04-2016 YPO3737 8422cbfab1d8c3fe4b2fd001b715a042 169 PIRSF PIRSF016548 1 161 3.7E-51 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 YPO3737 8422cbfab1d8c3fe4b2fd001b715a042 169 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 149 1.7E-55 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 YPO3737 8422cbfab1d8c3fe4b2fd001b715a042 169 Hamap MF_01181 Regulator of sigma D [rsd]. 1 153 40.669 T 22-04-2016 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YPO1458 5ba887914dcdf99a74fef2883af1dec8 239 PANTHER PTHR11941 11 236 5.3E-39 T 22-04-2016 YPO1458 5ba887914dcdf99a74fef2883af1dec8 239 SUPERFAMILY SSF52096 11 230 2.19E-36 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1458 5ba887914dcdf99a74fef2883af1dec8 239 Gene3D G3DSA:3.90.226.10 12 228 1.8E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1458 5ba887914dcdf99a74fef2883af1dec8 239 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 229 3.0E-30 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPO1232 505afeecd78dd91db52c5cd8a21408ad 80 Pfam PF06183 DinI-like family 17 76 1.6E-21 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPO1232 505afeecd78dd91db52c5cd8a21408ad 80 PANTHER PTHR36572 2 79 8.9E-48 T 22-04-2016 YPO1232 505afeecd78dd91db52c5cd8a21408ad 80 PANTHER PTHR36572:SF1 2 79 8.9E-48 T 22-04-2016 YPO1232 505afeecd78dd91db52c5cd8a21408ad 80 Gene3D G3DSA:3.30.910.10 1 78 5.1E-24 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPO1232 505afeecd78dd91db52c5cd8a21408ad 80 SUPERFAMILY SSF54857 1 78 1.28E-23 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YPO1833 e5c6e8288215a49c165596dc1e84e010 158 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 10 130 2.9E-48 T 22-04-2016 IPR006440 Death on curing protein GO:0016301 YPO1833 e5c6e8288215a49c165596dc1e84e010 158 Pfam PF02661 Fic/DOC family 10 93 1.4E-9 T 22-04-2016 IPR003812 Fido domain YPO1833 e5c6e8288215a49c165596dc1e84e010 158 PANTHER PTHR39426 2 156 9.5E-50 T 22-04-2016 YPO1833 e5c6e8288215a49c165596dc1e84e010 158 PANTHER PTHR39426:SF1 2 156 9.5E-50 T 22-04-2016 YPO3783 0ddbde6aed8a12b4b74ccbb5d810ac0c 176 PANTHER PTHR30353:SF5 4 175 2.8E-61 T 22-04-2016 YPO3783 0ddbde6aed8a12b4b74ccbb5d810ac0c 176 Pfam PF09335 SNARE associated Golgi protein 41 164 6.3E-13 T 22-04-2016 IPR032816 SNARE associated Golgi protein YPO3783 0ddbde6aed8a12b4b74ccbb5d810ac0c 176 PANTHER PTHR30353 4 175 2.8E-61 T 22-04-2016 IPR032818 DedA family YPO2253 162b91dc88e46e2a0746eec5985ba44f 500 PANTHER PTHR38464 2 500 4.8E-244 T 22-04-2016 YPO2253 162b91dc88e46e2a0746eec5985ba44f 500 PIRSF PIRSF001478 1 500 3.1E-259 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPO2253 162b91dc88e46e2a0746eec5985ba44f 500 PANTHER PTHR38464:SF1 2 500 4.8E-244 T 22-04-2016 YPO2253 162b91dc88e46e2a0746eec5985ba44f 500 SUPERFAMILY SSF50443 329 498 1.96E-71 T 22-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YPO2253 162b91dc88e46e2a0746eec5985ba44f 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 1.0E-170 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPO2253 162b91dc88e46e2a0746eec5985ba44f 500 Pfam PF02610 L-arabinose isomerase 5 359 1.6E-177 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPO2253 162b91dc88e46e2a0746eec5985ba44f 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 1.4E-46 T 22-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPO2253 162b91dc88e46e2a0746eec5985ba44f 500 SUPERFAMILY SSF53743 1 326 1.15E-123 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 YPO2253 162b91dc88e46e2a0746eec5985ba44f 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.578 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YPO0581 a1b2a6d61f6de121cdaeef765ae90442 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 109 495 3.3E-155 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 YPO0581 a1b2a6d61f6de121cdaeef765ae90442 496 PANTHER PTHR30536:SF5 1 496 5.6E-292 T 22-04-2016 YPO0581 a1b2a6d61f6de121cdaeef765ae90442 496 SMART SM00858 11 82 1.0E-11 T 22-04-2016 IPR013974 SAF domain YPO0581 a1b2a6d61f6de121cdaeef765ae90442 496 PANTHER PTHR30536 1 496 5.6E-292 T 22-04-2016 YPO0581 a1b2a6d61f6de121cdaeef765ae90442 496 Pfam PF08666 SAF domain 11 80 1.3E-11 T 22-04-2016 IPR013974 SAF domain YPO0180 9140e549e62624487f2355e5307ffc62 326 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 226 267 - T 22-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- YPO0180 9140e549e62624487f2355e5307ffc62 326 PANTHER PTHR10794:SF46 1 324 1.7E-95 T 22-04-2016 YPO0180 9140e549e62624487f2355e5307ffc62 326 Gene3D G3DSA:3.40.50.1820 41 171 5.8E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0180 9140e549e62624487f2355e5307ffc62 326 Gene3D G3DSA:3.40.50.1820 247 323 5.8E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0180 9140e549e62624487f2355e5307ffc62 326 PIRSF PIRSF005211 1 326 2.8E-104 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- YPO0180 9140e549e62624487f2355e5307ffc62 326 SUPERFAMILY SSF53474 28 302 1.88E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0180 9140e549e62624487f2355e5307ffc62 326 Pfam PF00561 alpha/beta hydrolase fold 60 298 1.4E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YPO0180 9140e549e62624487f2355e5307ffc62 326 PANTHER PTHR10794 1 324 1.7E-95 T 22-04-2016 YPO0927 cd463e05e43739c8577206bda044f56f 250 Gene3D G3DSA:3.30.2010.10 65 146 2.4E-21 T 22-04-2016 YPO0927 cd463e05e43739c8577206bda044f56f 250 PANTHER PTHR22726:SF4 1 250 1.3E-154 T 22-04-2016 YPO0927 cd463e05e43739c8577206bda044f56f 250 PANTHER PTHR22726 1 250 1.3E-154 T 22-04-2016 YPO0927 cd463e05e43739c8577206bda044f56f 250 Pfam PF01435 Peptidase family M48 79 245 1.7E-24 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YPO1343 44bd1f2422da2a8bfc1ada109198c178 378 PANTHER PTHR30535 2 377 3.1E-92 T 22-04-2016 YPO1343 44bd1f2422da2a8bfc1ada109198c178 378 Pfam PF01497 Periplasmic binding protein 96 321 6.3E-28 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YPO1343 44bd1f2422da2a8bfc1ada109198c178 378 Gene3D G3DSA:3.40.50.1980 78 184 5.6E-12 T 22-04-2016 YPO1343 44bd1f2422da2a8bfc1ada109198c178 378 SUPERFAMILY SSF53807 39 346 7.06E-40 T 22-04-2016 YPO1343 44bd1f2422da2a8bfc1ada109198c178 378 PANTHER PTHR30535:SF5 2 377 3.1E-92 T 22-04-2016 YPO1343 44bd1f2422da2a8bfc1ada109198c178 378 Gene3D G3DSA:3.40.50.1980 185 355 5.7E-23 T 22-04-2016 YPO2402 2c2a3da785f41f0af1db2800ec125749 248 PANTHER PTHR24220 3 248 5.4E-127 T 22-04-2016 YPO2402 2c2a3da785f41f0af1db2800ec125749 248 SUPERFAMILY SSF52540 2 231 1.18E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2402 2c2a3da785f41f0af1db2800ec125749 248 SMART SM00382 26 223 2.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2402 2c2a3da785f41f0af1db2800ec125749 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.6E-111 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 YPO2402 2c2a3da785f41f0af1db2800ec125749 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2402 2c2a3da785f41f0af1db2800ec125749 248 PANTHER PTHR24220:SF85 3 248 5.4E-127 T 22-04-2016 YPO2402 2c2a3da785f41f0af1db2800ec125749 248 Gene3D G3DSA:3.40.50.300 1 235 6.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2402 2c2a3da785f41f0af1db2800ec125749 248 Pfam PF00005 ABC transporter 17 172 2.5E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 SUPERFAMILY SSF81338 11 259 8.11E-80 T 22-04-2016 IPR023271 Aquaporin-like YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 PANTHER PTHR19139 12 279 1.6E-98 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 PANTHER PTHR19139:SF100 12 279 1.6E-98 T 22-04-2016 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 7.8E-73 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 236 256 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.97E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 Gene3D G3DSA:1.20.1080.10 7 260 1.6E-87 T 22-04-2016 IPR023271 Aquaporin-like YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 ProSitePatterns PS00221 MIP family signature. 68 76 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 YPO0091 adf11d43f1c641ac0fa8f4e6857ef64f 282 Pfam PF00230 Major intrinsic protein 6 253 1.2E-71 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YPO3671 69f10834e54af12134fcea64116681bf 289 PANTHER PTHR23088:SF27 1 270 1.8E-110 T 22-04-2016 YPO3671 69f10834e54af12134fcea64116681bf 289 SUPERFAMILY SSF56317 2 267 2.49E-72 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO3671 69f10834e54af12134fcea64116681bf 289 PANTHER PTHR23088 1 270 1.8E-110 T 22-04-2016 YPO3671 69f10834e54af12134fcea64116681bf 289 Gene3D G3DSA:3.60.110.10 1 271 3.0E-77 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO3671 69f10834e54af12134fcea64116681bf 289 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 7.1E-48 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO3671 69f10834e54af12134fcea64116681bf 289 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site YPO2888 2c83255975abda464dd4e86eb85f8eb5 317 Pfam PF14581 SseB protein C-terminal domain 192 302 6.6E-35 T 22-04-2016 IPR027945 SseB protein, C-terminal YPO2888 2c83255975abda464dd4e86eb85f8eb5 317 Pfam PF07179 SseB protein N-terminal domain 48 176 5.1E-26 T 22-04-2016 IPR009839 SseB protein N-terminal domain YPO0687 b93293b419fa59597b97417d1814f07f 244 Gene3D G3DSA:1.25.40.10 31 212 3.9E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO0687 b93293b419fa59597b97417d1814f07f 244 SUPERFAMILY SSF48452 43 213 3.99E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2291 4778df281d96376263859028a9d2db4e 846 Pfam PF10139 Putative bacterial virulence factor 28 471 8.2E-134 T 22-04-2016 IPR017030 Virulence effector, SrfC YPO2291 4778df281d96376263859028a9d2db4e 846 Pfam PF10139 Putative bacterial virulence factor 485 838 3.4E-68 T 22-04-2016 IPR017030 Virulence effector, SrfC YPO1422 9330fcfe89fb3a120db61e2fa1e3ee55 192 SUPERFAMILY SSF159594 24 190 3.4E-27 T 22-04-2016 YPO1422 9330fcfe89fb3a120db61e2fa1e3ee55 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 32 185 2.6E-38 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component YPO1422 9330fcfe89fb3a120db61e2fa1e3ee55 192 Gene3D G3DSA:3.40.50.10610 14 189 4.0E-13 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component YPO2563 5d95865658b256d7c245198a2f5a412e 164 SUPERFAMILY SSF116960 1 164 1.23E-69 T 22-04-2016 YPO2563 5d95865658b256d7c245198a2f5a412e 164 PIRSF PIRSF006272 1 164 5.9E-75 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YPO2563 5d95865658b256d7c245198a2f5a412e 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 38.102 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YPO2563 5d95865658b256d7c245198a2f5a412e 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 1.0E-95 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YPO2563 5d95865658b256d7c245198a2f5a412e 164 Gene3D G3DSA:1.10.287.680 1 52 5.8E-31 T 22-04-2016 IPR023145 YfbU, helix-hairpin domain YPO2563 5d95865658b256d7c245198a2f5a412e 164 Pfam PF03887 YfbU domain 1 164 1.3E-69 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YPO2563 5d95865658b256d7c245198a2f5a412e 164 Gene3D G3DSA:1.10.3190.10 53 164 1.5E-50 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain YPO2069 c429c5527295710bb7e50addf2662870 98 PANTHER PTHR30561 1 98 5.6E-68 T 22-04-2016 YPO2069 c429c5527295710bb7e50addf2662870 98 PANTHER PTHR30561:SF6 1 98 5.6E-68 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 YPO2069 c429c5527295710bb7e50addf2662870 98 Pfam PF00893 Small Multidrug Resistance protein 1 88 1.1E-26 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YPO2069 c429c5527295710bb7e50addf2662870 98 SUPERFAMILY SSF103481 1 97 1.02E-17 T 22-04-2016 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PRINTS PR00601 Bacterioferritin signature 23 43 3.3E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PRINTS PR00601 Bacterioferritin signature 65 85 3.3E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PRINTS PR00601 Bacterioferritin signature 44 64 3.3E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PRINTS PR00601 Bacterioferritin signature 3 22 3.3E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PRINTS PR00601 Bacterioferritin signature 86 106 3.3E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PRINTS PR00601 Bacterioferritin signature 128 149 3.3E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PRINTS PR00601 Bacterioferritin signature 107 127 3.3E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 SUPERFAMILY SSF47240 1 153 2.24E-52 T 22-04-2016 IPR009078 Ferritin-like superfamily YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 Gene3D G3DSA:1.20.1260.10 1 156 1.2E-63 T 22-04-2016 IPR012347 Ferritin-related YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PANTHER PTHR30295 1 156 1.8E-53 T 22-04-2016 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PIRSF PIRSF002560 1 157 2.2E-70 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 4.3E-80 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 PANTHER PTHR30295:SF9 1 156 1.8E-53 T 22-04-2016 YPO0206 5c78bb18213f020c0e750cd3c31543fa 157 Pfam PF00210 Ferritin-like domain 8 143 2.5E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YPO2440 379838de1622bbfd1edf1f50031b71fd 296 PANTHER PTHR24220:SF533 12 281 1.0E-182 T 22-04-2016 YPO2440 379838de1622bbfd1edf1f50031b71fd 296 Pfam PF00005 ABC transporter 29 174 4.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2440 379838de1622bbfd1edf1f50031b71fd 296 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2440 379838de1622bbfd1edf1f50031b71fd 296 PANTHER PTHR24220 12 281 1.0E-182 T 22-04-2016 YPO2440 379838de1622bbfd1edf1f50031b71fd 296 SUPERFAMILY SSF52540 5 237 6.25E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2440 379838de1622bbfd1edf1f50031b71fd 296 SMART SM00382 36 222 9.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2440 379838de1622bbfd1edf1f50031b71fd 296 Gene3D G3DSA:3.40.50.300 9 243 1.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2847 4d9138918912aaeda1be0628781cdd46 444 SUPERFAMILY SSF111369 81 320 1.12E-56 T 22-04-2016 YPO2847 4d9138918912aaeda1be0628781cdd46 444 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 4 415 55.141 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA YPO2847 4d9138918912aaeda1be0628781cdd46 444 Pfam PF13437 HlyD family secretion protein 200 306 7.5E-7 T 22-04-2016 YPO2847 4d9138918912aaeda1be0628781cdd46 444 PANTHER PTHR30469 2 44 3.7E-202 T 22-04-2016 YPO2847 4d9138918912aaeda1be0628781cdd46 444 PANTHER PTHR30469 60 407 3.7E-202 T 22-04-2016 YPO2847 4d9138918912aaeda1be0628781cdd46 444 Pfam PF13533 Biotin-lipoyl like 89 137 1.8E-16 T 22-04-2016 YPO2847 4d9138918912aaeda1be0628781cdd46 444 Gene3D G3DSA:2.40.50.100 197 232 2.7E-24 T 22-04-2016 YPO2847 4d9138918912aaeda1be0628781cdd46 444 Gene3D G3DSA:2.40.50.100 88 122 2.7E-24 T 22-04-2016 YPO2847 4d9138918912aaeda1be0628781cdd46 444 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 396 2.6E-77 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO2847 4d9138918912aaeda1be0628781cdd46 444 PANTHER PTHR30469:SF12 2 44 3.7E-202 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA YPO2847 4d9138918912aaeda1be0628781cdd46 444 PANTHER PTHR30469:SF12 60 407 3.7E-202 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA YPO1189 0e08d5d468a7ff9f514ec66b19eed55a 358 PANTHER PTHR30482 116 358 2.0E-200 T 22-04-2016 YPO1189 0e08d5d468a7ff9f514ec66b19eed55a 358 PANTHER PTHR30482 1 94 2.0E-200 T 22-04-2016 YPO1189 0e08d5d468a7ff9f514ec66b19eed55a 358 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 5.9E-130 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC YPO1189 0e08d5d468a7ff9f514ec66b19eed55a 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 340 8.3E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO1189 0e08d5d468a7ff9f514ec66b19eed55a 358 PANTHER PTHR30482:SF4 116 358 2.0E-200 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC YPO1189 0e08d5d468a7ff9f514ec66b19eed55a 358 PANTHER PTHR30482:SF4 1 94 2.0E-200 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC YPO0261 f59a9363c77ee2d70457088c23baee9f 82 TIGRFAM TIGR02498 type_III_ssaH: type III secretion system protein, SsaH family 4 82 4.5E-37 T 22-04-2016 IPR010437 Type III secretion system SsaH YPO0261 f59a9363c77ee2d70457088c23baee9f 82 Pfam PF06287 Protein of unknown function (DUF1039) 17 81 5.8E-30 T 22-04-2016 IPR010437 Type III secretion system SsaH YPO3675 7a1bb389de0f99de94b2daf1d80d47a3 119 Pfam PF10828 Protein of unknown function (DUF2570) 15 109 2.1E-6 T 22-04-2016 IPR022538 Protein of unknown function DUF2570 YPO3742 125ce2e9f0ba625c7aabd43770eed9b5 271 SUPERFAMILY SSF110399 1 235 5.89E-84 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 YPO3742 125ce2e9f0ba625c7aabd43770eed9b5 271 Hamap MF_00443 Thiazole synthase [thiG]. 1 263 42.932 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 YPO3742 125ce2e9f0ba625c7aabd43770eed9b5 271 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 236 7.3E-105 T 22-04-2016 YPO3742 125ce2e9f0ba625c7aabd43770eed9b5 271 PANTHER PTHR34266:SF2 1 268 2.2E-163 T 22-04-2016 YPO3742 125ce2e9f0ba625c7aabd43770eed9b5 271 PANTHER PTHR34266 1 268 2.2E-163 T 22-04-2016 YPO3742 125ce2e9f0ba625c7aabd43770eed9b5 271 Gene3D G3DSA:3.20.20.70 1 265 8.3E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO2665 a3146419f9bca7692336c5cdbe6c0346 100 PANTHER PTHR33569 2 99 3.9E-39 T 22-04-2016 YPO2665 a3146419f9bca7692336c5cdbe6c0346 100 SUPERFAMILY SSF54111 1 99 7.19E-41 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2665 a3146419f9bca7692336c5cdbe6c0346 100 Pfam PF00547 Urease, gamma subunit 1 99 2.4E-42 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2665 a3146419f9bca7692336c5cdbe6c0346 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2665 a3146419f9bca7692336c5cdbe6c0346 100 PANTHER PTHR33569:SF1 2 99 3.9E-39 T 22-04-2016 YPO2665 a3146419f9bca7692336c5cdbe6c0346 100 Gene3D G3DSA:3.30.280.10 1 100 6.6E-43 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2665 a3146419f9bca7692336c5cdbe6c0346 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.942 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2665 a3146419f9bca7692336c5cdbe6c0346 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.9E-43 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO2665 a3146419f9bca7692336c5cdbe6c0346 100 PIRSF PIRSF001223 1 100 3.2E-48 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YPO1873 c8ffc6cf6f3f4bc00299952dbc1a4ef2 319 PANTHER PTHR32552 1 284 2.4E-38 T 22-04-2016 YPO1873 c8ffc6cf6f3f4bc00299952dbc1a4ef2 319 Gene3D G3DSA:3.30.420.10 105 265 1.9E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1873 c8ffc6cf6f3f4bc00299952dbc1a4ef2 319 Pfam PF00665 Integrase core domain 110 224 9.4E-22 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO1873 c8ffc6cf6f3f4bc00299952dbc1a4ef2 319 SUPERFAMILY SSF53098 111 274 1.23E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO1873 c8ffc6cf6f3f4bc00299952dbc1a4ef2 319 Pfam PF13565 Homeodomain-like domain 11 82 4.4E-8 T 22-04-2016 YPO2371 158dcdefc7d0dbd725fc47e3a71459f2 104 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 33 94 3.1E-17 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor YPO2371 158dcdefc7d0dbd725fc47e3a71459f2 104 SUPERFAMILY SSF141488 29 101 1.1E-22 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor YPO2044 10e6a5e0960bef21ab432978fb16c23d 557 Pfam PF08479 POTRA domain, ShlB-type 81 154 1.4E-18 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YPO2044 10e6a5e0960bef21ab432978fb16c23d 557 PANTHER PTHR34597:SF2 1 557 1.6E-248 T 22-04-2016 YPO2044 10e6a5e0960bef21ab432978fb16c23d 557 Gene3D G3DSA:2.40.160.50 183 557 3.0E-83 T 22-04-2016 YPO2044 10e6a5e0960bef21ab432978fb16c23d 557 Gene3D G3DSA:3.10.20.310 77 154 1.2E-12 T 22-04-2016 YPO2044 10e6a5e0960bef21ab432978fb16c23d 557 PANTHER PTHR34597 1 557 1.6E-248 T 22-04-2016 YPO2044 10e6a5e0960bef21ab432978fb16c23d 557 PIRSF PIRSF029745 5 557 7.1E-102 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YPO2044 10e6a5e0960bef21ab432978fb16c23d 557 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 162 557 3.2E-109 T 22-04-2016 IPR005565 Haemolysin activator HlyB YPO0176 3f487635ead1106145cce64aa8b7d947 135 Gene3D G3DSA:3.30.300.20 35 132 2.3E-42 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YPO0176 3f487635ead1106145cce64aa8b7d947 135 Pfam PF02566 OsmC-like protein 30 127 6.5E-19 T 22-04-2016 IPR003718 OsmC/Ohr family YPO0176 3f487635ead1106145cce64aa8b7d947 135 SUPERFAMILY SSF82784 1 131 4.06E-42 T 22-04-2016 IPR003718 OsmC/Ohr family YPO0176 3f487635ead1106145cce64aa8b7d947 135 PANTHER PTHR34352 1 135 4.2E-58 T 22-04-2016 YPO0176 3f487635ead1106145cce64aa8b7d947 135 Gene3D G3DSA:2.20.25.10 1 34 1.4E-19 T 22-04-2016 YPO1743 b0a5d474077e23f905507b5ccf2b4c67 457 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPO1743 b0a5d474077e23f905507b5ccf2b4c67 457 PANTHER PTHR11785 1 449 4.4E-285 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO1743 b0a5d474077e23f905507b5ccf2b4c67 457 Pfam PF00324 Amino acid permease 18 445 4.1E-118 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPO1743 b0a5d474077e23f905507b5ccf2b4c67 457 PANTHER PTHR11785:SF26 1 449 4.4E-285 T 22-04-2016 YPO1743 b0a5d474077e23f905507b5ccf2b4c67 457 PIRSF PIRSF006060 1 449 2.0E-77 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO2785 5ea3e45bd0811a8b5c935e0de8ef0b47 81 Pfam PF13693 Winged helix-turn-helix DNA-binding 5 75 1.1E-33 T 22-04-2016 YPO2785 5ea3e45bd0811a8b5c935e0de8ef0b47 81 Gene3D G3DSA:1.10.260.40 1 70 2.7E-37 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2785 5ea3e45bd0811a8b5c935e0de8ef0b47 81 SUPERFAMILY SSF47413 3 70 1.74E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO1796 24cc44fa7cf3876bcda9532bae2e5c2d 146 SUPERFAMILY SSF140566 2 120 1.7E-19 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPO1796 24cc44fa7cf3876bcda9532bae2e5c2d 146 Gene3D G3DSA:1.20.58.300 3 119 6.6E-14 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPO1796 24cc44fa7cf3876bcda9532bae2e5c2d 146 Pfam PF05130 FlgN protein 2 135 4.5E-27 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YPO1721 f86abf1752e1c8ea365bbf35274ac528 306 Gene3D G3DSA:1.10.3720.10 28 293 7.0E-62 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1721 f86abf1752e1c8ea365bbf35274ac528 306 PANTHER PTHR32243 25 306 4.0E-156 T 22-04-2016 YPO1721 f86abf1752e1c8ea365bbf35274ac528 306 PANTHER PTHR32243:SF8 25 306 4.0E-156 T 22-04-2016 YPO1721 f86abf1752e1c8ea365bbf35274ac528 306 SUPERFAMILY SSF161098 30 306 6.54E-71 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1721 f86abf1752e1c8ea365bbf35274ac528 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 300 2.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4070 874760c3d056522572283ad76ea8d294 241 Pfam PF11254 Protein of unknown function (DUF3053) 20 236 5.6E-89 T 22-04-2016 IPR021413 Protein of unknown function DUF3053 YPO3170 aadb9f1586c1daf1a08b52989355c525 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.3E-65 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YPO3170 aadb9f1586c1daf1a08b52989355c525 163 PANTHER PTHR30476 1 163 1.9E-95 T 22-04-2016 YPO3170 aadb9f1586c1daf1a08b52989355c525 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.101 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YPO3170 aadb9f1586c1daf1a08b52989355c525 163 PANTHER PTHR30476:SF0 1 163 1.9E-95 T 22-04-2016 YPO3170 aadb9f1586c1daf1a08b52989355c525 163 Gene3D G3DSA:3.30.70.990 9 97 7.2E-35 T 22-04-2016 YPO3170 aadb9f1586c1daf1a08b52989355c525 163 SUPERFAMILY SSF89963 2 89 2.22E-30 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YPO3170 aadb9f1586c1daf1a08b52989355c525 163 Gene3D G3DSA:3.30.70.860 98 163 2.2E-35 T 22-04-2016 YPO3170 aadb9f1586c1daf1a08b52989355c525 163 SUPERFAMILY SSF89963 91 163 3.14E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YPO2923 cde6988265113c54f2d00d34afe44375 200 Pfam PF14437 MafB19-like deaminase 38 183 6.4E-30 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 YPO2923 cde6988265113c54f2d00d34afe44375 200 Gene3D G3DSA:3.40.140.10 33 182 1.6E-57 T 22-04-2016 YPO2923 cde6988265113c54f2d00d34afe44375 200 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 87 124 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YPO2923 cde6988265113c54f2d00d34afe44375 200 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 42 183 47.333 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 YPO2923 cde6988265113c54f2d00d34afe44375 200 PANTHER PTHR11079 38 185 7.3E-48 T 22-04-2016 YPO2923 cde6988265113c54f2d00d34afe44375 200 SUPERFAMILY SSF53927 36 187 1.12E-54 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YPO3373 b7ea5b07e054961166ef0772eb8df7d6 119 Gene3D G3DSA:3.30.479.10 2 118 2.9E-40 T 22-04-2016 YPO3373 b7ea5b07e054961166ef0772eb8df7d6 119 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 1.3E-33 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPO3373 b7ea5b07e054961166ef0772eb8df7d6 119 PANTHER PTHR12589 5 119 1.1E-50 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPO3373 b7ea5b07e054961166ef0772eb8df7d6 119 PIRSF PIRSF006113 1 119 5.3E-54 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPO3373 b7ea5b07e054961166ef0772eb8df7d6 119 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 118 1.1E-34 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPO3373 b7ea5b07e054961166ef0772eb8df7d6 119 SUPERFAMILY SSF55620 3 119 1.56E-40 T 22-04-2016 YPO0318 4ac842e583554f79fd0efd627fb41598 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 65 7.7E-29 T 22-04-2016 IPR014318 Phage shock protein, PspG YPO0318 4ac842e583554f79fd0efd627fb41598 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 3.6E-25 T 22-04-2016 IPR014318 Phage shock protein, PspG YPO1477a 1e780979f8a6bda49bca958f25e5eb6f 106 Pfam PF13592 Winged helix-turn helix 15 61 9.0E-6 T 22-04-2016 IPR025959 Winged helix-turn helix domain YPO3836 3831f2924869941e764b49e39660f68f 296 TIGRFAM TIGR00688 rarD: protein RarD 8 261 7.0E-99 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 YPO3836 3831f2924869941e764b49e39660f68f 296 SUPERFAMILY SSF103481 42 146 1.96E-16 T 22-04-2016 YPO3836 3831f2924869941e764b49e39660f68f 296 Pfam PF00892 EamA-like transporter family 9 142 2.4E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO3836 3831f2924869941e764b49e39660f68f 296 SUPERFAMILY SSF103481 190 285 1.44E-6 T 22-04-2016 YPO3836 3831f2924869941e764b49e39660f68f 296 PANTHER PTHR22911:SF41 1 296 4.0E-161 T 22-04-2016 YPO3836 3831f2924869941e764b49e39660f68f 296 PANTHER PTHR22911 1 296 4.0E-161 T 22-04-2016 YPO0147 3fe5bb3c404aad71aff1ef2ef796f060 201 Gene3D G3DSA:3.20.20.140 10 98 7.2E-4 T 22-04-2016 YPO0147 3fe5bb3c404aad71aff1ef2ef796f060 201 Pfam PF05137 Fimbrial assembly protein (PilN) 101 171 1.3E-13 T 22-04-2016 IPR007813 Fimbrial assembly PilN YPO1663 20143e8e59d75d8b1cd81d6aa424b719 194 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 2 194 4.0E-112 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YPO1663 20143e8e59d75d8b1cd81d6aa424b719 194 PIRSF PIRSF003159 2 183 1.3E-89 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YPO1663 20143e8e59d75d8b1cd81d6aa424b719 194 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 2 188 46.077 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YPO1663 20143e8e59d75d8b1cd81d6aa424b719 194 Pfam PF05280 Flagellar transcriptional activator (FlhC) 2 174 1.1E-82 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YPO1663 20143e8e59d75d8b1cd81d6aa424b719 194 SUPERFAMILY SSF160930 6 162 8.24E-65 T 22-04-2016 YPO1067 a7b14e7c46d302569ed8a19fd616963f 242 Pfam PF17185 NlpE C-terminal OB domain 152 240 1.5E-36 T 22-04-2016 IPR033450 NlpE, C-terminal OB domain YPO1067 a7b14e7c46d302569ed8a19fd616963f 242 Pfam PF04170 NlpE N-terminal domain 53 137 6.4E-26 T 22-04-2016 IPR007298 Copper resistance lipoprotein NlpE YPO4086 2eab9c02246fb83367cd662adf15bd39 112 Pfam PF07119 Protein of unknown function (DUF1375) 13 76 1.2E-15 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 YPO4084 0a26af72d6d03f006ae30861e162b92f 154 SUPERFAMILY SSF49764 30 134 7.32E-20 T 22-04-2016 IPR008978 HSP20-like chaperone YPO4084 0a26af72d6d03f006ae30861e162b92f 154 PANTHER PTHR11527:SF127 1 142 6.4E-81 T 22-04-2016 YPO4084 0a26af72d6d03f006ae30861e162b92f 154 PANTHER PTHR11527 1 142 6.4E-81 T 22-04-2016 IPR031107 Small heat shock protein HSP20 YPO4084 0a26af72d6d03f006ae30861e162b92f 154 Gene3D G3DSA:2.60.40.790 22 134 1.7E-15 T 22-04-2016 IPR008978 HSP20-like chaperone YPO4084 0a26af72d6d03f006ae30861e162b92f 154 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 147 49.04 T 22-04-2016 IPR022848 Small heat shock protein IbpB YPO4084 0a26af72d6d03f006ae30861e162b92f 154 Pfam PF00011 Hsp20/alpha crystallin family 39 134 1.1E-16 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain YPO4113 b8c58bd392c4a764213d3419901d6fbb 240 PANTHER PTHR10010:SF14 1 224 9.1E-95 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YPO4113 b8c58bd392c4a764213d3419901d6fbb 240 Gene3D G3DSA:1.20.58.220 125 232 4.8E-31 T 22-04-2016 YPO4113 b8c58bd392c4a764213d3419901d6fbb 240 Pfam PF01895 PhoU domain 128 212 8.2E-17 T 22-04-2016 IPR026022 PhoU domain YPO4113 b8c58bd392c4a764213d3419901d6fbb 240 Pfam PF01895 PhoU domain 26 111 2.3E-22 T 22-04-2016 IPR026022 PhoU domain YPO4113 b8c58bd392c4a764213d3419901d6fbb 240 PANTHER PTHR10010 1 224 9.1E-95 T 22-04-2016 YPO4113 b8c58bd392c4a764213d3419901d6fbb 240 SUPERFAMILY SSF109755 13 230 3.98E-70 T 22-04-2016 YPO4113 b8c58bd392c4a764213d3419901d6fbb 240 Gene3D G3DSA:1.20.58.220 9 114 1.7E-37 T 22-04-2016 YPO4113 b8c58bd392c4a764213d3419901d6fbb 240 PIRSF PIRSF003107 7 226 3.2E-67 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YPO4113 b8c58bd392c4a764213d3419901d6fbb 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 5.9E-74 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YPO1525 bbb60b141bfe33944b240ec3fbeef41d 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.5E-70 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 YPO1525 bbb60b141bfe33944b240ec3fbeef41d 193 PANTHER PTHR11241:SF1 77 192 2.4E-70 T 22-04-2016 YPO1525 bbb60b141bfe33944b240ec3fbeef41d 193 PANTHER PTHR11241:SF1 1 58 2.4E-70 T 22-04-2016 YPO1525 bbb60b141bfe33944b240ec3fbeef41d 193 Gene3D G3DSA:2.70.40.10 1 192 4.5E-62 T 22-04-2016 IPR029054 dUTPase-like YPO1525 bbb60b141bfe33944b240ec3fbeef41d 193 PANTHER PTHR11241 77 192 2.4E-70 T 22-04-2016 YPO1525 bbb60b141bfe33944b240ec3fbeef41d 193 PANTHER PTHR11241 1 58 2.4E-70 T 22-04-2016 YPO1525 bbb60b141bfe33944b240ec3fbeef41d 193 Pfam PF00692 dUTPase 79 185 1.4E-10 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 YPO1525 bbb60b141bfe33944b240ec3fbeef41d 193 SUPERFAMILY SSF51283 1 193 5.83E-62 T 22-04-2016 IPR029054 dUTPase-like YPO1525 bbb60b141bfe33944b240ec3fbeef41d 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 35.137 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 YPO3202 128bac69272492c5ee7afdebb0f0c1de 439 PANTHER PTHR30588:SF0 2 439 5.6E-239 T 22-04-2016 YPO3202 128bac69272492c5ee7afdebb0f0c1de 439 Pfam PF05525 Branched-chain amino acid transport protein 7 426 2.8E-152 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YPO3202 128bac69272492c5ee7afdebb0f0c1de 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.2E-155 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YPO3202 128bac69272492c5ee7afdebb0f0c1de 439 PANTHER PTHR30588 2 439 5.6E-239 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YPO0082 e082bab057e29ce223f71e8b59e2c2ed 237 PANTHER PTHR33254:SF5 1 233 6.4E-101 T 22-04-2016 YPO0082 e082bab057e29ce223f71e8b59e2c2ed 237 Gene3D G3DSA:3.50.30.40 27 185 7.1E-47 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPO0082 e082bab057e29ce223f71e8b59e2c2ed 237 SUPERFAMILY SSF89562 27 188 6.54E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPO0082 e082bab057e29ce223f71e8b59e2c2ed 237 Pfam PF03737 Demethylmenaquinone methyltransferase 32 178 1.7E-37 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPO0082 e082bab057e29ce223f71e8b59e2c2ed 237 PANTHER PTHR33254 1 233 6.4E-101 T 22-04-2016 YPO0082 e082bab057e29ce223f71e8b59e2c2ed 237 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 8 229 1.4E-104 T 22-04-2016 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 YPO0042 5df98b44024c022b07b0817928b6b694 207 PANTHER PTHR30506 1 206 8.5E-136 T 22-04-2016 YPO0042 5df98b44024c022b07b0817928b6b694 207 PANTHER PTHR30506:SF2 1 206 8.5E-136 T 22-04-2016 YPO0042 5df98b44024c022b07b0817928b6b694 207 Pfam PF03458 UPF0126 domain 5 79 4.8E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YPO0042 5df98b44024c022b07b0817928b6b694 207 Pfam PF03458 UPF0126 domain 91 164 7.1E-21 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YPO2902 5d49eef17c0ea6c35b1ccf5da52db72f 224 PIRSF PIRSF008159 7 224 2.6E-76 T 22-04-2016 IPR016537 Uncharacterised conserved protein UCP008159, YPO2902 5d49eef17c0ea6c35b1ccf5da52db72f 224 Pfam PF06226 Protein of unknown function (DUF1007) 22 223 3.4E-64 T 22-04-2016 IPR010412 Protein of unknown function DUF1007 YPO2199 7ebbf9a1e865175791d1bcd23feff099 256 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 247 1.6E-101 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 YPO2199 7ebbf9a1e865175791d1bcd23feff099 256 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 250 24.547 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 YPO2446 9a37c0942957ab07cb114a4b482da73a 221 SUPERFAMILY SSF56784 6 216 5.38E-50 T 22-04-2016 IPR023214 HAD-like domain YPO2446 9a37c0942957ab07cb114a4b482da73a 221 PANTHER PTHR18901 1 217 8.1E-74 T 22-04-2016 YPO2446 9a37c0942957ab07cb114a4b482da73a 221 Gene3D G3DSA:1.10.150.240 21 91 3.2E-33 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO2446 9a37c0942957ab07cb114a4b482da73a 221 Gene3D G3DSA:3.40.50.1000 95 216 1.1E-38 T 22-04-2016 IPR023214 HAD-like domain YPO2446 9a37c0942957ab07cb114a4b482da73a 221 Gene3D G3DSA:3.40.50.1000 3 20 1.1E-38 T 22-04-2016 IPR023214 HAD-like domain YPO2446 9a37c0942957ab07cb114a4b482da73a 221 PANTHER PTHR18901:SF34 1 217 8.1E-74 T 22-04-2016 YPO2446 9a37c0942957ab07cb114a4b482da73a 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 1.1E-25 T 22-04-2016 IPR023214 HAD-like domain YPO2446 9a37c0942957ab07cb114a4b482da73a 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 191 5.3E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2446 9a37c0942957ab07cb114a4b482da73a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2446 9a37c0942957ab07cb114a4b482da73a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2446 9a37c0942957ab07cb114a4b482da73a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2446 9a37c0942957ab07cb114a4b482da73a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YPO2470 d19e185da0a918e3c90858422c288cf8 415 Pfam PF00924 Mechanosensitive ion channel 144 399 2.7E-55 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YPO2470 d19e185da0a918e3c90858422c288cf8 415 SUPERFAMILY SSF50182 188 253 2.84E-12 T 22-04-2016 IPR010920 LSM domain YPO2470 d19e185da0a918e3c90858422c288cf8 415 Gene3D G3DSA:2.30.30.60 203 253 4.1E-10 T 22-04-2016 YPO2470 d19e185da0a918e3c90858422c288cf8 415 PANTHER PTHR30414:SF0 1 415 1.4E-221 T 22-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 YPO2470 d19e185da0a918e3c90858422c288cf8 415 PANTHER PTHR30414 1 415 1.4E-221 T 22-04-2016 YPO1112 824628d2578f7787a8e0db6a45862640 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 1.1E-90 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPO1112 824628d2578f7787a8e0db6a45862640 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 3.9E-32 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YPO1112 824628d2578f7787a8e0db6a45862640 238 PANTHER PTHR11921 4 236 3.9E-135 T 22-04-2016 YPO1112 824628d2578f7787a8e0db6a45862640 238 Gene3D G3DSA:3.10.20.30 1 106 2.2E-37 T 22-04-2016 IPR012675 Beta-grasp domain YPO1112 824628d2578f7787a8e0db6a45862640 238 PANTHER PTHR11921:SF29 4 236 3.9E-135 T 22-04-2016 YPO1112 824628d2578f7787a8e0db6a45862640 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO1112 824628d2578f7787a8e0db6a45862640 238 SUPERFAMILY SSF46548 107 236 9.59E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YPO1112 824628d2578f7787a8e0db6a45862640 238 Gene3D G3DSA:1.10.1060.10 108 236 2.8E-47 T 22-04-2016 YPO1112 824628d2578f7787a8e0db6a45862640 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 1.2E-9 T 22-04-2016 YPO1112 824628d2578f7787a8e0db6a45862640 238 SUPERFAMILY SSF54292 1 106 4.18E-31 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YPO4117 f80e62d218e1d46734910de6fa285a29 346 Pfam PF12849 PBP superfamily domain 23 306 5.5E-61 T 22-04-2016 IPR024370 PBP domain YPO4117 f80e62d218e1d46734910de6fa285a29 346 PANTHER PTHR30570 1 340 2.4E-135 T 22-04-2016 YPO4117 f80e62d218e1d46734910de6fa285a29 346 Gene3D G3DSA:3.40.190.10 27 177 1.7E-55 T 22-04-2016 YPO4117 f80e62d218e1d46734910de6fa285a29 346 Gene3D G3DSA:3.40.190.10 181 338 8.1E-36 T 22-04-2016 YPO4117 f80e62d218e1d46734910de6fa285a29 346 PANTHER PTHR30570:SF0 1 340 2.4E-135 T 22-04-2016 YPO4117 f80e62d218e1d46734910de6fa285a29 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 9.2E-128 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 YPO4117 f80e62d218e1d46734910de6fa285a29 346 PIRSF PIRSF002756 1 338 9.7E-105 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 YPO4117 f80e62d218e1d46734910de6fa285a29 346 SUPERFAMILY SSF53850 28 339 3.31E-95 T 22-04-2016 YPO3245 1773cd52b1519fa9f929afc8a250b807 248 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 147 223 1.8E-12 T 22-04-2016 IPR004356 Adhesin operon regulatory protein GO:0006355 YPO1146 58ee3916fa5a67972363b3f011f7593f 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 3.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1146 58ee3916fa5a67972363b3f011f7593f 231 PANTHER PTHR30183 1 227 2.4E-92 T 22-04-2016 YPO1146 58ee3916fa5a67972363b3f011f7593f 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 5.8E-75 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 YPO1146 58ee3916fa5a67972363b3f011f7593f 231 SUPERFAMILY SSF161098 5 219 5.76E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1146 58ee3916fa5a67972363b3f011f7593f 231 Gene3D G3DSA:1.10.3720.10 7 226 5.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2302 d25d4a46bcfc594342ba9ec62b796d90 464 PANTHER PTHR10160 4 464 6.2E-253 T 22-04-2016 YPO2302 d25d4a46bcfc594342ba9ec62b796d90 464 SUPERFAMILY SSF52467 289 463 5.61E-77 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO2302 d25d4a46bcfc594342ba9ec62b796d90 464 Gene3D G3DSA:3.40.50.1220 288 463 4.3E-91 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YPO2302 d25d4a46bcfc594342ba9ec62b796d90 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 1.9E-199 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 YPO2302 d25d4a46bcfc594342ba9ec62b796d90 464 PIRSF PIRSF000204 1 464 1.6E-238 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 YPO2967 55f213166c8e62dd89903d6c95a25692 258 PANTHER PTHR38095 1 258 1.1E-38 T 22-04-2016 YPO2967 55f213166c8e62dd89903d6c95a25692 258 PANTHER PTHR38095:SF2 1 258 1.1E-38 T 22-04-2016 YPO2967 55f213166c8e62dd89903d6c95a25692 258 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 251 3.7E-27 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 YPO1909 5060155be02d554b2a6a8bda9b46c0de 366 Gene3D G3DSA:3.40.50.720 4 139 6.9E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1909 5060155be02d554b2a6a8bda9b46c0de 366 PIRSF PIRSF017494 4 363 3.1E-153 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YPO1909 5060155be02d554b2a6a8bda9b46c0de 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 5.5E-24 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YPO1909 5060155be02d554b2a6a8bda9b46c0de 366 SUPERFAMILY SSF51735 8 140 5.79E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1909 5060155be02d554b2a6a8bda9b46c0de 366 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 6 348 2.9E-161 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YPO0617 2cf3a24462016e990c21646a17252b10 508 PIRSF PIRSF001892 15 504 6.7E-175 T 22-04-2016 IPR028351 Cyclolysin transport protein CyaE GO:0005215 YPO0617 2cf3a24462016e990c21646a17252b10 508 Pfam PF02321 Outer membrane efflux protein 307 495 4.7E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPO0617 2cf3a24462016e990c21646a17252b10 508 Pfam PF02321 Outer membrane efflux protein 87 280 1.1E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPO0617 2cf3a24462016e990c21646a17252b10 508 PANTHER PTHR30203 1 497 0.0 T 22-04-2016 YPO0617 2cf3a24462016e990c21646a17252b10 508 PANTHER PTHR30203:SF8 1 497 0.0 T 22-04-2016 YPO0617 2cf3a24462016e990c21646a17252b10 508 SUPERFAMILY SSF56954 77 497 1.44E-74 T 22-04-2016 YPO0617 2cf3a24462016e990c21646a17252b10 508 SUPERFAMILY SSF56954 12 45 1.44E-74 T 22-04-2016 YPO0617 2cf3a24462016e990c21646a17252b10 508 Gene3D G3DSA:1.20.1600.10 75 498 5.3E-72 T 22-04-2016 YPO1017 d84abcb29ad88eaf2aae69bd8ecc6acf 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 27 47 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO1017 d84abcb29ad88eaf2aae69bd8ecc6acf 136 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 51 132 2.0E-27 T 22-04-2016 IPR022204 Prepilin peptidase dependent protein C YPO2273 ec1a4493e302f1d33de88f17af09c09c 140 SMART SM00530 9 63 2.9E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO2273 ec1a4493e302f1d33de88f17af09c09c 140 SUPERFAMILY SSF47413 5 65 3.66E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2273 ec1a4493e302f1d33de88f17af09c09c 140 Pfam PF01381 Helix-turn-helix 19 60 2.7E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO2273 ec1a4493e302f1d33de88f17af09c09c 140 Gene3D G3DSA:1.10.260.40 7 66 1.4E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2730 3600f3ec8a2a6fa39255db0247b76ed3 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 1.7E-12 T 22-04-2016 IPR013987 PhnA protein, N-terminal YPO2730 3600f3ec8a2a6fa39255db0247b76ed3 113 SUPERFAMILY SSF82057 41 112 9.61E-29 T 22-04-2016 YPO2730 3600f3ec8a2a6fa39255db0247b76ed3 113 Gene3D G3DSA:2.20.25.10 2 41 5.1E-18 T 22-04-2016 YPO2730 3600f3ec8a2a6fa39255db0247b76ed3 113 Gene3D G3DSA:2.30.30.40 44 112 7.5E-38 T 22-04-2016 YPO2730 3600f3ec8a2a6fa39255db0247b76ed3 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 2.9E-49 T 22-04-2016 IPR004624 PhnA protein YPO2730 3600f3ec8a2a6fa39255db0247b76ed3 113 SUPERFAMILY SSF57783 3 36 2.55E-12 T 22-04-2016 YPO2730 3600f3ec8a2a6fa39255db0247b76ed3 113 PANTHER PTHR30305 2 113 2.3E-85 T 22-04-2016 YPO2730 3600f3ec8a2a6fa39255db0247b76ed3 113 Pfam PF03831 PhnA domain 47 112 4.8E-34 T 22-04-2016 IPR013988 PhnA protein, C-terminal YPO3741a 87c3653c6ba803f264971dad7037dd9b 63 PANTHER PTHR34472 1 63 3.2E-14 T 22-04-2016 YPO3741a 87c3653c6ba803f264971dad7037dd9b 63 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 1 63 2.0E-20 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis YPO3741a 87c3653c6ba803f264971dad7037dd9b 63 PANTHER PTHR34472:SF1 1 63 3.2E-14 T 22-04-2016 YPO3741a 87c3653c6ba803f264971dad7037dd9b 63 Gene3D G3DSA:3.10.20.30 2 63 1.9E-19 T 22-04-2016 IPR012675 Beta-grasp domain YPO3741a 87c3653c6ba803f264971dad7037dd9b 63 Pfam PF02597 ThiS family 5 63 1.7E-12 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPO3741a 87c3653c6ba803f264971dad7037dd9b 63 SUPERFAMILY SSF54285 2 63 7.27E-15 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPO1513 7f0a287721cb51024bd8d83e486d6d30 231 PANTHER PTHR30249 1 230 1.1E-113 T 22-04-2016 YPO1513 7f0a287721cb51024bd8d83e486d6d30 231 PANTHER PTHR30249:SF5 1 230 1.1E-113 T 22-04-2016 YPO1513 7f0a287721cb51024bd8d83e486d6d30 231 Pfam PF04172 LrgB-like family 12 223 2.3E-78 T 22-04-2016 IPR007300 CidB/LrgB family YPO1513 7f0a287721cb51024bd8d83e486d6d30 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 5.0E-98 T 22-04-2016 IPR005261 Conserved hypothetical protein CHP00659 YPO3440 80832d8c5fe80fbfa6f86f99a27e29c2 364 PANTHER PTHR33529:SF2 2 361 6.2E-140 T 22-04-2016 YPO3440 80832d8c5fe80fbfa6f86f99a27e29c2 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.0E-115 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 YPO3440 80832d8c5fe80fbfa6f86f99a27e29c2 364 PANTHER PTHR33529 2 361 6.2E-140 T 22-04-2016 YPO3440 80832d8c5fe80fbfa6f86f99a27e29c2 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 1.3E-75 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 YPO2866 05ce6f02ce21efe9c77b62597c375f86 139 Pfam PF06836 Protein of unknown function (DUF1240) 45 139 1.3E-38 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPO3326 72fdfbf990e399e08e17887d40b0df9f 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 5.5E-45 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO3326 72fdfbf990e399e08e17887d40b0df9f 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.7E-127 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 YPO3326 72fdfbf990e399e08e17887d40b0df9f 231 PANTHER PTHR22789 1 231 5.0E-172 T 22-04-2016 YPO3326 72fdfbf990e399e08e17887d40b0df9f 231 PANTHER PTHR22789:SF7 1 231 5.0E-172 T 22-04-2016 YPO3326 72fdfbf990e399e08e17887d40b0df9f 231 SMART SM01007 7 198 4.7E-65 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO3326 72fdfbf990e399e08e17887d40b0df9f 231 Gene3D G3DSA:3.40.225.10 2 231 5.9E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO3326 72fdfbf990e399e08e17887d40b0df9f 231 SUPERFAMILY SSF53639 1 223 1.94E-68 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YPO3298 26eea08616e587f3751d820b362735a2 396 Pfam PF00571 CBS domain 248 296 0.0022 T 22-04-2016 IPR000644 CBS domain YPO3298 26eea08616e587f3751d820b362735a2 396 Gene3D G3DSA:3.10.580.10 161 288 2.5E-11 T 22-04-2016 YPO3298 26eea08616e587f3751d820b362735a2 396 Pfam PF03471 Transporter associated domain 314 387 2.5E-17 T 22-04-2016 IPR005170 Transporter-associated domain YPO3298 26eea08616e587f3751d820b362735a2 396 SUPERFAMILY SSF56176 310 393 7.36E-19 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YPO3298 26eea08616e587f3751d820b362735a2 396 SMART SM01091 312 389 3.4E-23 T 22-04-2016 IPR005170 Transporter-associated domain YPO3298 26eea08616e587f3751d820b362735a2 396 Pfam PF01595 Domain of unknown function DUF21 1 154 3.8E-42 T 22-04-2016 IPR002550 Domain of unknown function DUF21 YPO3298 26eea08616e587f3751d820b362735a2 396 Gene3D G3DSA:3.30.465.10 289 388 1.2E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YPO3298 26eea08616e587f3751d820b362735a2 396 SUPERFAMILY SSF54631 162 299 8.72E-23 T 22-04-2016 YPO3298 26eea08616e587f3751d820b362735a2 396 PANTHER PTHR22777 1 392 1.3E-145 T 22-04-2016 YPO3298 26eea08616e587f3751d820b362735a2 396 PANTHER PTHR22777:SF3 1 392 1.3E-145 T 22-04-2016 YPO2080 237dadbe122640e0e1b2bca9c57ad6ee 90 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 83 1.0E-42 T 22-04-2016 IPR027354 YcgL domain YPO2080 237dadbe122640e0e1b2bca9c57ad6ee 90 PANTHER PTHR38109 2 87 4.3E-40 T 22-04-2016 YPO2080 237dadbe122640e0e1b2bca9c57ad6ee 90 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.625 T 22-04-2016 IPR027354 YcgL domain YPO2080 237dadbe122640e0e1b2bca9c57ad6ee 90 Pfam PF05166 YcgL domain 3 75 1.6E-33 T 22-04-2016 IPR027354 YcgL domain YPO2080 237dadbe122640e0e1b2bca9c57ad6ee 90 SUPERFAMILY SSF160191 1 87 1.57E-38 T 22-04-2016 YPO2612 251a01542787168562a345ced797f852 242 PIRSF PIRSF039085 1 242 2.5E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPO2612 251a01542787168562a345ced797f852 242 SMART SM00382 27 214 7.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2612 251a01542787168562a345ced797f852 242 Gene3D G3DSA:3.40.50.300 2 237 9.4E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2612 251a01542787168562a345ced797f852 242 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO2612 251a01542787168562a345ced797f852 242 SUPERFAMILY SSF52540 2 236 3.3E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2612 251a01542787168562a345ced797f852 242 PANTHER PTHR24220:SF317 4 241 2.7E-193 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 YPO2612 251a01542787168562a345ced797f852 242 PANTHER PTHR24220 4 241 2.7E-193 T 22-04-2016 YPO2612 251a01542787168562a345ced797f852 242 Pfam PF00005 ABC transporter 19 166 6.7E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1387 07041af84d6aa64005c008422a5f0aae 364 Gene3D G3DSA:2.150.10.10 28 136 3.2E-9 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1387 07041af84d6aa64005c008422a5f0aae 364 SUPERFAMILY SSF54523 274 361 2.35E-17 T 22-04-2016 YPO1387 07041af84d6aa64005c008422a5f0aae 364 Pfam PF03895 YadA-like C-terminal region 289 361 4.0E-12 T 22-04-2016 IPR005594 YadA-like, C-terminal YPO1387 07041af84d6aa64005c008422a5f0aae 364 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 114 134 7.8E-8 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 YPO1387 07041af84d6aa64005c008422a5f0aae 364 SUPERFAMILY SSF101967 26 136 1.29E-9 T 22-04-2016 YPO1387 07041af84d6aa64005c008422a5f0aae 364 Gene3D G3DSA:3.30.1300.30 274 361 3.9E-19 T 22-04-2016 YPO1387 07041af84d6aa64005c008422a5f0aae 364 PANTHER PTHR35843 1 363 2.5E-86 T 22-04-2016 YPO1387 07041af84d6aa64005c008422a5f0aae 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 173 191 2.83E-6 T 22-04-2016 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YPO1387 07041af84d6aa64005c008422a5f0aae 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 267 283 2.83E-6 T 22-04-2016 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YPO1387 07041af84d6aa64005c008422a5f0aae 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 240 255 2.83E-6 T 22-04-2016 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YPO1387 07041af84d6aa64005c008422a5f0aae 364 PRINTS PR01756 Yersinia outer membrane adhesin signature 75 95 2.83E-6 T 22-04-2016 IPR008126 Outer membrane adhesion, Yersinia GO:0005518|GO:0007155|GO:0009405|GO:0019867 YPO2340 263c7d14007c84c2534f4e9b3340f1c6 256 Pfam PF00246 Zinc carboxypeptidase 35 178 1.3E-13 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YPO2340 263c7d14007c84c2534f4e9b3340f1c6 256 SUPERFAMILY SSF53187 155 244 4.3E-34 T 22-04-2016 YPO2340 263c7d14007c84c2534f4e9b3340f1c6 256 SUPERFAMILY SSF53187 28 128 4.3E-34 T 22-04-2016 YPO2340 263c7d14007c84c2534f4e9b3340f1c6 256 Gene3D G3DSA:3.40.630.10 25 239 1.1E-40 T 22-04-2016 YPO1930 c329e43ac2ca9f72cc02bb3fbb60128a 157 Gene3D G3DSA:2.60.40.10 37 83 3.2E-9 T 22-04-2016 IPR013783 Immunoglobulin-like fold YPO1930 c329e43ac2ca9f72cc02bb3fbb60128a 157 SUPERFAMILY SSF49478 39 88 5.89E-7 T 22-04-2016 YPO1841 a084d53b8395ba4a91aeb59074f27a72 466 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 455 2.7E-62 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 YPO1841 a084d53b8395ba4a91aeb59074f27a72 466 PANTHER PTHR30288:SF0 2 466 7.3E-107 T 22-04-2016 YPO1841 a084d53b8395ba4a91aeb59074f27a72 466 PANTHER PTHR30288 2 466 7.3E-107 T 22-04-2016 YPO1841 a084d53b8395ba4a91aeb59074f27a72 466 Pfam PF07196 Flagellin hook IN motif 128 185 5.6E-12 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 YPO1841 a084d53b8395ba4a91aeb59074f27a72 466 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 8.2E-22 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 YPO0410 4c035c9a1d1e437b5a7980f63aa6c92b 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 307 1.8E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO0410 4c035c9a1d1e437b5a7980f63aa6c92b 333 PANTHER PTHR32196 1 331 1.9E-167 T 22-04-2016 YPO0410 4c035c9a1d1e437b5a7980f63aa6c92b 333 PANTHER PTHR32196:SF24 1 331 1.9E-167 T 22-04-2016 YPO1485 44a1695fe1a380d00eaf46ade5a3883c 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 580 3.8E-173 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO1485 44a1695fe1a380d00eaf46ade5a3883c 587 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 584 1.5E-188 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO1485 44a1695fe1a380d00eaf46ade5a3883c 587 PANTHER PTHR35370:SF4 2 587 0.0 T 22-04-2016 YPO1485 44a1695fe1a380d00eaf46ade5a3883c 587 PIRSF PIRSF028304 1 586 1.2E-161 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO1485 44a1695fe1a380d00eaf46ade5a3883c 587 PANTHER PTHR35370 2 587 0.0 T 22-04-2016 YPO1939 aca552d52bdc358b38f21ff2e4c9720a 340 Gene3D G3DSA:3.40.710.10 27 331 7.6E-102 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO1939 aca552d52bdc358b38f21ff2e4c9720a 340 Pfam PF04960 Glutaminase 47 331 2.5E-95 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPO1939 aca552d52bdc358b38f21ff2e4c9720a 340 PANTHER PTHR12544:SF31 1 340 1.6E-223 T 22-04-2016 YPO1939 aca552d52bdc358b38f21ff2e4c9720a 340 SUPERFAMILY SSF56601 29 331 2.91E-100 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YPO1939 aca552d52bdc358b38f21ff2e4c9720a 340 TIGRFAM TIGR03814 Gln_ase: glutaminase A 32 331 1.4E-100 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPO1939 aca552d52bdc358b38f21ff2e4c9720a 340 PANTHER PTHR12544 1 340 1.6E-223 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPO1939 aca552d52bdc358b38f21ff2e4c9720a 340 Hamap MF_00313 Glutaminase [glsA]. 29 331 40.831 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YPO3835 1eecf44797e6cab923e34896d13623f5 156 PANTHER PTHR12418:SF35 9 155 1.9E-83 T 22-04-2016 YPO3835 1eecf44797e6cab923e34896d13623f5 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 154 2.8E-15 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain YPO3835 1eecf44797e6cab923e34896d13623f5 156 SUPERFAMILY SSF54637 13 155 1.0E-24 T 22-04-2016 IPR029069 HotDog domain YPO3835 1eecf44797e6cab923e34896d13623f5 156 PANTHER PTHR12418 9 155 1.9E-83 T 22-04-2016 YPO3835 1eecf44797e6cab923e34896d13623f5 156 Gene3D G3DSA:3.10.129.10 16 155 2.5E-30 T 22-04-2016 IPR029069 HotDog domain YPO3835 1eecf44797e6cab923e34896d13623f5 156 Pfam PF03061 Thioesterase superfamily 58 143 6.5E-16 T 22-04-2016 IPR006683 Thioesterase domain YPO2531 19bf57210be563d9495782c578aca76c 102 PANTHER PTHR35893 1 102 4.9E-67 T 22-04-2016 YPO2531 19bf57210be563d9495782c578aca76c 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 10 102 1.5E-30 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB YPO2531 19bf57210be563d9495782c578aca76c 102 PANTHER PTHR35893:SF1 1 102 4.9E-67 T 22-04-2016 YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 PANTHER PTHR10584:SF166 2 305 2.1E-86 T 22-04-2016 YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 SUPERFAMILY SSF53613 2 302 2.34E-73 T 22-04-2016 IPR029056 Ribokinase-like YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 Gene3D G3DSA:3.40.1190.20 2 306 1.1E-76 T 22-04-2016 IPR029056 Ribokinase-like YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 Pfam PF00294 pfkB family carbohydrate kinase 4 283 2.3E-51 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 PRINTS PR00990 Ribokinase signature 173 188 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 PRINTS PR00990 Ribokinase signature 105 118 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 PRINTS PR00990 Ribokinase signature 6 27 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 PRINTS PR00990 Ribokinase signature 217 228 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 PRINTS PR00990 Ribokinase signature 33 52 1.2E-22 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YPO3621 dedf47a76d0838d4a8f2589b999c17ea 310 PANTHER PTHR10584 2 305 2.1E-86 T 22-04-2016 YPO0570 6615b680e0a1bfd4a8d08bebaa96faec 101 PANTHER PTHR35893 1 101 8.4E-76 T 22-04-2016 YPO0570 6615b680e0a1bfd4a8d08bebaa96faec 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 4.9E-32 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB YPO0570 6615b680e0a1bfd4a8d08bebaa96faec 101 Gene3D G3DSA:1.20.120.20 8 75 8.2E-5 T 22-04-2016 YPO0570 6615b680e0a1bfd4a8d08bebaa96faec 101 PANTHER PTHR35893:SF2 1 101 8.4E-76 T 22-04-2016 YPO0315 b9bd905c07c6f452623aecbbf850cabe 169 PANTHER PTHR33202 1 169 5.6E-97 T 22-04-2016 YPO0315 b9bd905c07c6f452623aecbbf850cabe 169 PANTHER PTHR33202:SF6 1 169 5.6E-97 T 22-04-2016 YPO0315 b9bd905c07c6f452623aecbbf850cabe 169 Gene3D G3DSA:1.10.10.10 12 84 5.8E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0315 b9bd905c07c6f452623aecbbf850cabe 169 Pfam PF01475 Ferric uptake regulator family 20 138 2.5E-13 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YPO0315 b9bd905c07c6f452623aecbbf850cabe 169 SUPERFAMILY SSF46785 12 144 3.37E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2274 e28ac21857aaca7590e9e4ff873dea41 350 Pfam PF05144 Phage replication protein CRI 1 230 5.0E-69 T 22-04-2016 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 YPO2274 e28ac21857aaca7590e9e4ff873dea41 350 Pfam PF05155 Phage X family 253 336 4.4E-31 T 22-04-2016 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 YPO2274 e28ac21857aaca7590e9e4ff873dea41 350 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 2 338 2.3E-77 T 22-04-2016 IPR006516 Replication-associated protein G2P GO:0006260 YPO3732 7b40fd9ddb6d2cc5da20802724171567 196 Gene3D G3DSA:1.20.1590.10 1 194 1.6E-86 T 22-04-2016 IPR023381 YP001051499.1-like domain YPO3732 7b40fd9ddb6d2cc5da20802724171567 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 2.4E-76 T 22-04-2016 IPR007338 Protein of unknown function DUF416 YPO4080 ac7a27710294a2343f0534b107506076 687 SUPERFAMILY SSF51445 376 653 3.8E-77 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO4080 ac7a27710294a2343f0534b107506076 687 SUPERFAMILY SSF51445 182 320 3.8E-77 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO4080 ac7a27710294a2343f0534b107506076 687 PANTHER PTHR10357:SF11 436 682 1.1E-125 T 22-04-2016 YPO4080 ac7a27710294a2343f0534b107506076 687 PANTHER PTHR10357:SF11 225 322 1.1E-125 T 22-04-2016 YPO4080 ac7a27710294a2343f0534b107506076 687 PANTHER PTHR10357:SF11 161 209 1.1E-125 T 22-04-2016 YPO4080 ac7a27710294a2343f0534b107506076 687 PANTHER PTHR10357:SF11 351 412 1.1E-125 T 22-04-2016 YPO4080 ac7a27710294a2343f0534b107506076 687 Pfam PF00128 Alpha amylase, catalytic domain 228 606 1.1E-41 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO4080 ac7a27710294a2343f0534b107506076 687 Gene3D G3DSA:3.20.20.80 185 654 6.9E-90 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO4080 ac7a27710294a2343f0534b107506076 687 PANTHER PTHR10357 436 682 1.1E-125 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO4080 ac7a27710294a2343f0534b107506076 687 PANTHER PTHR10357 225 322 1.1E-125 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO4080 ac7a27710294a2343f0534b107506076 687 PANTHER PTHR10357 161 209 1.1E-125 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO4080 ac7a27710294a2343f0534b107506076 687 PANTHER PTHR10357 351 412 1.1E-125 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO4080 ac7a27710294a2343f0534b107506076 687 SMART SM00642 195 647 2.4E-81 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO4080 ac7a27710294a2343f0534b107506076 687 PIRSF PIRSF036917 1 686 0.0 T 22-04-2016 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 YPO2741 9df4b95254e50a22b2c95c85bb92c320 170 Pfam PF03918 Cytochrome C biogenesis protein 7 145 2.4E-56 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family YPO2741 9df4b95254e50a22b2c95c85bb92c320 170 PANTHER PTHR30009 1 150 3.4E-35 T 22-04-2016 YPO2741 9df4b95254e50a22b2c95c85bb92c320 170 PANTHER PTHR30009:SF7 1 150 3.4E-35 T 22-04-2016 YPO1154 2adf1b9e788be94357c3817cba7964c0 240 SUPERFAMILY SSF52540 3 213 3.33E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1154 2adf1b9e788be94357c3817cba7964c0 240 PANTHER PTHR21343 2 215 3.1E-123 T 22-04-2016 YPO1154 2adf1b9e788be94357c3817cba7964c0 240 Gene3D G3DSA:3.40.50.300 3 213 5.8E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1154 2adf1b9e788be94357c3817cba7964c0 240 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 30.125 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO1154 2adf1b9e788be94357c3817cba7964c0 240 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 4.1E-60 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO1154 2adf1b9e788be94357c3817cba7964c0 240 PANTHER PTHR21343:SF13 2 215 3.1E-123 T 22-04-2016 YPO1154 2adf1b9e788be94357c3817cba7964c0 240 PIRSF PIRSF006755 1 230 9.9E-84 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YPO1154 2adf1b9e788be94357c3817cba7964c0 240 Pfam PF13500 AAA domain 5 211 8.7E-36 T 22-04-2016 YPO0290 9ff2065f652337578ec23a3e533f8915 359 Pfam PF15608 PELOTA RNA binding domain 276 357 7.0E-29 T 22-04-2016 IPR028157 PELOTA RNA-binding domain KEGG: 00900+3.4.22.- YPO0290 9ff2065f652337578ec23a3e533f8915 359 PIRSF PIRSF020979 1 359 5.6E-197 T 22-04-2016 IPR011215 Phosphoribosyl transferase KEGG: 00900+3.4.22.- YPO0290 9ff2065f652337578ec23a3e533f8915 359 Pfam PF11202 Phosphoribosyl transferase (PRTase) 9 248 1.1E-90 T 22-04-2016 IPR011215 Phosphoribosyl transferase KEGG: 00900+3.4.22.- YPO3042 240411d9b22267edefdc750ec4cbb0ba 92 PIRSF PIRSF037266 1 92 1.3E-41 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 YPO3042 240411d9b22267edefdc750ec4cbb0ba 92 Pfam PF09904 Winged helix-turn helix 3 90 8.7E-39 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 Gene3D G3DSA:1.20.1250.20 13 182 2.3E-24 T 22-04-2016 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 5.8E-7 T 22-04-2016 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 5.8E-7 T 22-04-2016 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 5.8E-7 T 22-04-2016 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 5.8E-7 T 22-04-2016 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 Gene3D G3DSA:1.20.1250.20 257 454 1.5E-15 T 22-04-2016 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 Pfam PF07690 Major Facilitator Superfamily 16 405 5.7E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 PANTHER PTHR23501 1 472 0.0 T 22-04-2016 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 414 1.6E-71 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 SUPERFAMILY SSF103473 13 194 6.67E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 SUPERFAMILY SSF103473 244 452 6.67E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0009 1ffce76e3e947ba91b29058f74b16c2b 474 PANTHER PTHR23501:SF1 1 472 0.0 T 22-04-2016 YPO0192 d37417b7762adabd3ddffd605e045dc1 73 Pfam PF09526 Probable metal-binding protein (DUF2387) 10 59 7.9E-20 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 YPO0192 d37417b7762adabd3ddffd605e045dc1 73 Gene3D G3DSA:3.30.50.10 18 52 2.2E-4 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 YPO0192 d37417b7762adabd3ddffd605e045dc1 73 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 10 67 5.8E-30 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 1.6E-40 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 4 326 38.551 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 1.6E-6 T 22-04-2016 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 PANTHER PTHR22960 1 282 1.4E-137 T 22-04-2016 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 1.4E-104 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 SMART SM00729 13 217 9.7E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 Gene3D G3DSA:3.20.20.70 3 304 6.5E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 Pfam PF04055 Radical SAM superfamily 18 178 1.0E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YPO1159 49cd695bbb4ae87cab0ca67bc84073f5 326 SUPERFAMILY SSF102114 4 279 8.11E-70 T 22-04-2016 YPCD1.16c e7ed6e191e1f4e2f12809da8ebd46cda 107 SUPERFAMILY SSF103473 12 106 2.49E-7 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPCD1.16c e7ed6e191e1f4e2f12809da8ebd46cda 107 PANTHER PTHR23501:SF1 1 107 2.1E-63 T 22-04-2016 YPCD1.16c e7ed6e191e1f4e2f12809da8ebd46cda 107 PANTHER PTHR23501 1 107 2.1E-63 T 22-04-2016 YPCD1.16c e7ed6e191e1f4e2f12809da8ebd46cda 107 Gene3D G3DSA:1.20.1250.20 24 106 2.3E-6 T 22-04-2016 YPO2692 4898fe311c64abcb2ae3c8a1faf0d280 562 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.22 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPO2692 4898fe311c64abcb2ae3c8a1faf0d280 562 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 1.3E-260 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPO2692 4898fe311c64abcb2ae3c8a1faf0d280 562 PANTHER PTHR30607 2 562 0.0 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPO2692 4898fe311c64abcb2ae3c8a1faf0d280 562 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 3.4E-241 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPO2692 4898fe311c64abcb2ae3c8a1faf0d280 562 PIRSF PIRSF001294 1 560 7.7E-239 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YPO2710 6835bb76b6d4dbe5549725444545d022 545 Gene3D G3DSA:1.20.58.100 430 533 3.1E-35 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPO2710 6835bb76b6d4dbe5549725444545d022 545 SUPERFAMILY SSF56425 250 365 2.84E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPO2710 6835bb76b6d4dbe5549725444545d022 545 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 534 1.1E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPO2710 6835bb76b6d4dbe5549725444545d022 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 1.3E-9 T 22-04-2016 YPO2710 6835bb76b6d4dbe5549725444545d022 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 23 42 1.3E-9 T 22-04-2016 YPO2710 6835bb76b6d4dbe5549725444545d022 545 SUPERFAMILY SSF51905 18 267 1.75E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2710 6835bb76b6d4dbe5549725444545d022 545 SUPERFAMILY SSF51905 368 459 1.75E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2710 6835bb76b6d4dbe5549725444545d022 545 Gene3D G3DSA:3.50.50.60 361 422 1.7E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2710 6835bb76b6d4dbe5549725444545d022 545 Gene3D G3DSA:3.50.50.60 12 255 1.7E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO2710 6835bb76b6d4dbe5549725444545d022 545 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 21 532 8.0E-224 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YPO2710 6835bb76b6d4dbe5549725444545d022 545 Pfam PF00890 FAD binding domain 22 404 6.6E-101 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPO2710 6835bb76b6d4dbe5549725444545d022 545 Gene3D G3DSA:3.90.700.10 256 360 1.3E-36 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPO2710 6835bb76b6d4dbe5549725444545d022 545 PANTHER PTHR11632:SF27 1 545 3.9E-277 T 22-04-2016 YPO2710 6835bb76b6d4dbe5549725444545d022 545 PANTHER PTHR11632 1 545 3.9E-277 T 22-04-2016 YPO2710 6835bb76b6d4dbe5549725444545d022 545 SUPERFAMILY SSF46977 437 537 7.06E-32 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YPO1738 1f22c751b755f20f697a04d240aa498d 79 ProDom PD060536 YECJ YPO1738 1 79 2.0E-39 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ YPO1738 1f22c751b755f20f697a04d240aa498d 79 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 1.0E-47 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ YPO3690 98f56058f10323ad8d040ccc2fbae2c6 93 SUPERFAMILY SSF52038 1 87 1.31E-28 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) YPO3690 98f56058f10323ad8d040ccc2fbae2c6 93 Pfam PF01337 Barstar (barnase inhibitor) 6 80 3.5E-11 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) YPO3690 98f56058f10323ad8d040ccc2fbae2c6 93 Gene3D G3DSA:3.30.370.10 1 83 3.1E-22 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) YPO2234 0c93e9c2c7ec3eca09c0404b145080a9 688 Pfam PF02554 Carbon starvation protein CstA 32 407 7.1E-170 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 YPO2234 0c93e9c2c7ec3eca09c0404b145080a9 688 PANTHER PTHR30252 5 684 0.0 T 22-04-2016 YPO2234 0c93e9c2c7ec3eca09c0404b145080a9 688 PANTHER PTHR30252:SF2 5 684 0.0 T 22-04-2016 YPO2234 0c93e9c2c7ec3eca09c0404b145080a9 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 3.1E-32 T 22-04-2016 IPR025299 CstA, C-terminal domain YPO1700 d7ac4c99a1f640006063cf0fc2a8c1ae 184 PANTHER PTHR37089:SF4 1 184 5.2E-96 T 22-04-2016 YPO1700 d7ac4c99a1f640006063cf0fc2a8c1ae 184 SMART SM00972 121 181 5.4E-16 T 22-04-2016 IPR007893 Spore coat protein U YPO1700 d7ac4c99a1f640006063cf0fc2a8c1ae 184 PANTHER PTHR37089 1 184 5.2E-96 T 22-04-2016 YPO1700 d7ac4c99a1f640006063cf0fc2a8c1ae 184 Pfam PF05229 Spore Coat Protein U domain 27 181 6.3E-30 T 22-04-2016 IPR007893 Spore coat protein U YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 Gene3D G3DSA:2.40.128.90 31 311 3.5E-109 T 22-04-2016 IPR023619 Peptidase A26 GO:0004190 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PRINTS PR00482 Omptin serine protease signature 59 84 2.8E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PRINTS PR00482 Omptin serine protease signature 85 110 2.8E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PRINTS PR00482 Omptin serine protease signature 117 144 2.8E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PRINTS PR00482 Omptin serine protease signature 210 231 2.8E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PRINTS PR00482 Omptin serine protease signature 145 172 2.8E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PRINTS PR00482 Omptin serine protease signature 257 277 2.8E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PRINTS PR00482 Omptin serine protease signature 188 209 2.8E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PRINTS PR00482 Omptin serine protease signature 236 256 2.8E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PRINTS PR00482 Omptin serine protease signature 39 53 2.8E-69 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 PIRSF PIRSF001522 1 311 5.8E-127 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 SUPERFAMILY SSF69917 31 311 3.66E-99 T 22-04-2016 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 YPO1231 0c70407e943b1a3fa4d735e6de91bf13 311 Pfam PF01278 Omptin family 32 311 6.6E-117 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 YPO3037 a63b8f352b59e170a196b0a5b7e006de 155 PANTHER PTHR38604:SF1 1 155 1.1E-68 T 22-04-2016 YPO3037 a63b8f352b59e170a196b0a5b7e006de 155 PIRSF PIRSF006105 9 155 2.1E-52 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPO3037 a63b8f352b59e170a196b0a5b7e006de 155 Gene3D G3DSA:4.10.1020.10 68 135 6.8E-32 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain YPO3037 a63b8f352b59e170a196b0a5b7e006de 155 PANTHER PTHR38604 1 155 1.1E-68 T 22-04-2016 YPO3037 a63b8f352b59e170a196b0a5b7e006de 155 SUPERFAMILY SSF48695 54 150 7.49E-41 T 22-04-2016 IPR011031 Multihaem cytochrome YPO3037 a63b8f352b59e170a196b0a5b7e006de 155 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 42 149 4.9E-45 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPO1208 bfdc0ecf02903d617896502feb575372 175 Gene3D G3DSA:2.40.160.10 24 118 4.0E-5 T 22-04-2016 IPR023614 Porin domain YPO1208 bfdc0ecf02903d617896502feb575372 175 SUPERFAMILY SSF56925 33 175 1.96E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YPO1208 bfdc0ecf02903d617896502feb575372 175 Pfam PF07437 YfaZ precursor 1 175 3.0E-90 T 22-04-2016 IPR009998 YfaZ YPO0048 6b858efb91f2e0f54fb7b4ea0946b62b 404 PANTHER PTHR14359:SF20 4 400 3.1E-210 T 22-04-2016 YPO0048 6b858efb91f2e0f54fb7b4ea0946b62b 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 369 2.2E-74 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 YPO0048 6b858efb91f2e0f54fb7b4ea0946b62b 404 Gene3D G3DSA:3.40.50.1950 4 185 2.0E-68 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPO0048 6b858efb91f2e0f54fb7b4ea0946b62b 404 Pfam PF02441 Flavoprotein 7 135 8.9E-34 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPO0048 6b858efb91f2e0f54fb7b4ea0946b62b 404 PANTHER PTHR14359 4 400 3.1E-210 T 22-04-2016 YPO0048 6b858efb91f2e0f54fb7b4ea0946b62b 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 395 1.7E-163 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 YPO0048 6b858efb91f2e0f54fb7b4ea0946b62b 404 SUPERFAMILY SSF52507 3 181 8.76E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPO0048 6b858efb91f2e0f54fb7b4ea0946b62b 404 Gene3D G3DSA:3.40.50.10300 186 402 9.1E-89 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 YPO0048 6b858efb91f2e0f54fb7b4ea0946b62b 404 SUPERFAMILY SSF102645 185 400 2.75E-80 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 YPO1193 7a58ad963b423a40460e23673f0daba7 471 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 35 402 2.1E-96 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 29 46 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 94 112 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 73 92 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 113 132 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 47 66 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 6 25 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 342 357 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 385 404 7.1E-43 T 22-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 YPO1193 7a58ad963b423a40460e23673f0daba7 471 Gene3D G3DSA:3.40.640.10 84 356 2.5E-91 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PANTHER PTHR11999:SF70 1 470 7.5E-181 T 22-04-2016 YPO1193 7a58ad963b423a40460e23673f0daba7 471 SUPERFAMILY SSF53383 1 470 2.66E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1193 7a58ad963b423a40460e23673f0daba7 471 Gene3D G3DSA:3.90.1150.10 357 469 4.9E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1193 7a58ad963b423a40460e23673f0daba7 471 PANTHER PTHR11999 1 470 7.5E-181 T 22-04-2016 YPO1193 7a58ad963b423a40460e23673f0daba7 471 Gene3D G3DSA:1.20.1340.10 1 81 1.1E-30 T 22-04-2016 YPO1915 064699b09075ae01b36702a3b09782ee 426 PANTHER PTHR12778 19 411 1.8E-62 T 22-04-2016 YPO1915 064699b09075ae01b36702a3b09782ee 426 Pfam PF07690 Major Facilitator Superfamily 25 324 2.8E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO1915 064699b09075ae01b36702a3b09782ee 426 Gene3D G3DSA:1.20.1250.20 229 414 2.1E-10 T 22-04-2016 YPO1915 064699b09075ae01b36702a3b09782ee 426 SUPERFAMILY SSF103473 4 414 6.93E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO1342 f7a72c147559f63dbf34bd7e2803f270 308 PANTHER PTHR10264:SF78 3 267 2.6E-45 T 22-04-2016 YPO1342 f7a72c147559f63dbf34bd7e2803f270 308 Pfam PF01145 SPFH domain / Band 7 family 35 210 1.3E-24 T 22-04-2016 IPR001107 Band 7 domain YPO1342 f7a72c147559f63dbf34bd7e2803f270 308 PANTHER PTHR10264 3 267 2.6E-45 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YPO1342 f7a72c147559f63dbf34bd7e2803f270 308 SMART SM00244 31 194 0.003 T 22-04-2016 IPR001107 Band 7 domain YPO1342 f7a72c147559f63dbf34bd7e2803f270 308 SUPERFAMILY SSF117892 62 198 1.31E-13 T 22-04-2016 IPR001107 Band 7 domain YPO4077 8917dc8e0e061463c4536d914924e073 214 PANTHER PTHR30363 7 212 1.1E-115 T 22-04-2016 YPO4077 8917dc8e0e061463c4536d914924e073 214 SUPERFAMILY SSF46785 16 194 1.87E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO4077 8917dc8e0e061463c4536d914924e073 214 PANTHER PTHR30363:SF9 7 212 1.1E-115 T 22-04-2016 YPO4077 8917dc8e0e061463c4536d914924e073 214 Gene3D G3DSA:1.10.10.10 16 111 2.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2961 d3deba8417b2e84d169a8e0502299c32 174 Pfam PF09900 Predicted membrane protein (DUF2127) 23 161 2.2E-29 T 22-04-2016 IPR021125 Protein of unknown function DUF2127 YPO2961 d3deba8417b2e84d169a8e0502299c32 174 PIRSF PIRSF034455 1 170 3.1E-45 T 22-04-2016 IPR014591 Uncharacterised conserved protein UCP034455 YPO2437 e18ac6f85173ca1f415cb8f2c532f701 227 PANTHER PTHR33508 4 225 3.4E-142 T 22-04-2016 YPO2437 e18ac6f85173ca1f415cb8f2c532f701 227 Pfam PF01914 MarC family integral membrane protein 9 218 2.1E-62 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPO2437 e18ac6f85173ca1f415cb8f2c532f701 227 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 15 215 6.0E-37 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPO2437 e18ac6f85173ca1f415cb8f2c532f701 227 PANTHER PTHR33508:SF2 4 225 3.4E-142 T 22-04-2016 YPO0489 11cb7236efb7efeb74fdc5280c0a7443 154 Pfam PF12582 Protein of unknown function (DUF3757) 22 140 1.1E-27 T 22-04-2016 IPR022231 Protein of unknown function DUF3757 YPO1382 0e97b64c40203fc8f83f5c6b109acd34 224 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 53 115 9.4E-8 T 22-04-2016 IPR002654 Glycosyl transferase, family 25 YPO1084 c38e23f4b6eff80b8f8bcd899065017c 72 PANTHER PTHR10587:SF72 16 71 6.7E-18 T 22-04-2016 YPO1084 c38e23f4b6eff80b8f8bcd899065017c 72 Gene3D G3DSA:3.20.20.370 9 69 1.0E-14 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO1084 c38e23f4b6eff80b8f8bcd899065017c 72 SUPERFAMILY SSF88713 9 70 2.45E-13 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO1084 c38e23f4b6eff80b8f8bcd899065017c 72 PANTHER PTHR10587 16 71 6.7E-18 T 22-04-2016 YPO1966 cad24af0f4ad682afbbd80407032a8aa 330 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 330 147.608 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 YPO1966 cad24af0f4ad682afbbd80407032a8aa 330 SUPERFAMILY SSF53187 1 320 7.61E-88 T 22-04-2016 YPO1966 cad24af0f4ad682afbbd80407032a8aa 330 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 322 2.2E-73 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 YPO1966 cad24af0f4ad682afbbd80407032a8aa 330 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 9.6E-153 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 YPO1966 cad24af0f4ad682afbbd80407032a8aa 330 PANTHER PTHR15162 1 326 1.6E-112 T 22-04-2016 YPO1966 cad24af0f4ad682afbbd80407032a8aa 330 Gene3D G3DSA:3.40.630.10 39 235 5.6E-17 T 22-04-2016 YPO1966 cad24af0f4ad682afbbd80407032a8aa 330 PIRSF PIRSF017020 1 327 6.1E-125 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 YPO0093 281eeb45ea6cb9f5ad9c36d112b83061 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.09 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 YPO0093 281eeb45ea6cb9f5ad9c36d112b83061 79 Pfam PF06005 Protein of unknown function (DUF904) 1 78 1.7E-28 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 YPO0708 21cb0154d928ac507d165be6c9f7a892 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 8.1E-27 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 YPO0708 21cb0154d928ac507d165be6c9f7a892 89 PANTHER PTHR34040 1 89 7.1E-38 T 22-04-2016 YPO0708 21cb0154d928ac507d165be6c9f7a892 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 6.5E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0708 21cb0154d928ac507d165be6c9f7a892 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 6.5E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0708 21cb0154d928ac507d165be6c9f7a892 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 6.5E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0708 21cb0154d928ac507d165be6c9f7a892 89 PIRSF PIRSF004669 1 89 1.5E-30 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0708 21cb0154d928ac507d165be6c9f7a892 89 Pfam PF01313 Bacterial export proteins, family 3 8 77 2.6E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0708 21cb0154d928ac507d165be6c9f7a892 89 PANTHER PTHR34040:SF2 1 89 7.1E-38 T 22-04-2016 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 PIRSF PIRSF036918 1 606 6.3E-249 T 22-04-2016 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 SUPERFAMILY SSF81296 11 95 1.71E-5 T 22-04-2016 IPR014756 Immunoglobulin E-set YPO3200 a84895ce8c39af5cc377eff5a31943de 609 Pfam PF00128 Alpha amylase, catalytic domain 174 490 1.4E-74 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 SMART SM00642 124 518 4.1E-88 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 Gene3D G3DSA:2.60.40.1180 523 603 4.6E-6 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YPO3200 a84895ce8c39af5cc377eff5a31943de 609 PANTHER PTHR10357 40 135 1.8E-277 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 PANTHER PTHR10357 171 579 1.8E-277 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 SUPERFAMILY SSF51011 527 604 1.44E-8 T 22-04-2016 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 Gene3D G3DSA:3.20.20.80 114 519 1.1E-107 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 5 101 2.2E-7 T 22-04-2016 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 PANTHER PTHR10357:SF144 40 135 1.8E-277 T 22-04-2016 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 PANTHER PTHR10357:SF144 171 579 1.8E-277 T 22-04-2016 YPO3200 a84895ce8c39af5cc377eff5a31943de 609 SUPERFAMILY SSF51445 114 527 4.31E-92 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO0878 8648d78151eecbc4f1daf9c9feff25de 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 54 1.8E-18 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) YPO0878 8648d78151eecbc4f1daf9c9feff25de 66 PANTHER PTHR36154 1 66 5.3E-20 T 22-04-2016 YPO0878 8648d78151eecbc4f1daf9c9feff25de 66 SUPERFAMILY SSF46955 6 63 3.66E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 SMART SM00342 195 278 2.6E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 SUPERFAMILY SSF46689 181 224 4.3E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 SUPERFAMILY SSF46689 232 284 1.97E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 PANTHER PTHR11019 11 286 1.2E-75 T 22-04-2016 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 Pfam PF12833 Helix-turn-helix domain 202 280 1.3E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 Gene3D G3DSA:1.10.10.60 233 282 1.2E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 PANTHER PTHR11019:SF11 11 286 1.2E-75 T 22-04-2016 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 7.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 7.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YPO0401 00242f91f0f0129dc64f8fc10a76a251 291 Gene3D G3DSA:1.10.10.60 174 232 8.9E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0722 992466527ddc5f1b038b596f092d22c3 148 PIRSF PIRSF002889 1 148 1.9E-35 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YPO0722 992466527ddc5f1b038b596f092d22c3 148 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 146 6.3E-31 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YPO0722 992466527ddc5f1b038b596f092d22c3 148 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPO0722 992466527ddc5f1b038b596f092d22c3 148 PANTHER PTHR30435:SF12 3 148 9.4E-50 T 22-04-2016 YPO0722 992466527ddc5f1b038b596f092d22c3 148 PANTHER PTHR30435 3 148 9.4E-50 T 22-04-2016 YPO0722 992466527ddc5f1b038b596f092d22c3 148 Pfam PF00460 Flagella basal body rod protein 15 39 4.0E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO2873 a97a1fe4ffe602fd6d169b6f3b6ac9cd 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 4.0E-32 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 YPO2873 a97a1fe4ffe602fd6d169b6f3b6ac9cd 74 Gene3D G3DSA:2.10.290.10 2 70 2.6E-31 T 22-04-2016 IPR029037 YfgJ-like YPO2873 a97a1fe4ffe602fd6d169b6f3b6ac9cd 74 SUPERFAMILY SSF161187 2 70 1.96E-27 T 22-04-2016 IPR029037 YfgJ-like YPO2873 a97a1fe4ffe602fd6d169b6f3b6ac9cd 74 Pfam PF07191 zinc-ribbons 4 68 6.7E-29 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 YPO3789 53213a706738f4741a5ebc3923b04154 317 SUPERFAMILY SSF46785 1 109 6.53E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3789 53213a706738f4741a5ebc3923b04154 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3789 53213a706738f4741a5ebc3923b04154 317 Pfam PF03466 LysR substrate binding domain 87 288 2.8E-41 T 22-04-2016 IPR005119 LysR, substrate-binding YPO3789 53213a706738f4741a5ebc3923b04154 317 Gene3D G3DSA:1.10.10.10 1 86 4.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3789 53213a706738f4741a5ebc3923b04154 317 PANTHER PTHR30126:SF25 1 303 1.7E-203 T 22-04-2016 YPO3789 53213a706738f4741a5ebc3923b04154 317 SUPERFAMILY SSF53850 88 291 1.13E-38 T 22-04-2016 YPO3789 53213a706738f4741a5ebc3923b04154 317 Gene3D G3DSA:3.40.190.10 178 253 2.3E-17 T 22-04-2016 YPO3789 53213a706738f4741a5ebc3923b04154 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3789 53213a706738f4741a5ebc3923b04154 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3789 53213a706738f4741a5ebc3923b04154 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YPO3789 53213a706738f4741a5ebc3923b04154 317 Gene3D G3DSA:3.40.190.10 91 177 5.3E-16 T 22-04-2016 YPO3789 53213a706738f4741a5ebc3923b04154 317 PANTHER PTHR30126 1 303 1.7E-203 T 22-04-2016 YPO0569a 2f1a6977d911fc016aa8da3b0fa16fe6 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 16 127 1.3E-20 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III YPO0953 12aacaa0fe0d5397254647c73467f3b9 90 PANTHER PTHR36965:SF1 2 90 1.6E-54 T 22-04-2016 YPO0953 12aacaa0fe0d5397254647c73467f3b9 90 PIRSF PIRSF029827 1 90 3.3E-42 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPO0953 12aacaa0fe0d5397254647c73467f3b9 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 8.0E-38 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPO0953 12aacaa0fe0d5397254647c73467f3b9 90 Gene3D G3DSA:1.10.3880.10 1 89 2.7E-41 T 22-04-2016 YPO0953 12aacaa0fe0d5397254647c73467f3b9 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPO0953 12aacaa0fe0d5397254647c73467f3b9 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 26.812 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPO0953 12aacaa0fe0d5397254647c73467f3b9 90 PANTHER PTHR36965 2 90 1.6E-54 T 22-04-2016 YPO0953 12aacaa0fe0d5397254647c73467f3b9 90 SUPERFAMILY SSF111148 1 89 1.83E-38 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YPO1723 388c23806398ab95ba91157ef6e10f4e 555 Pfam PF06917 Periplasmic pectate lyase 14 539 2.6E-129 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YPO1723 388c23806398ab95ba91157ef6e10f4e 555 PIRSF PIRSF001432 1 555 2.2E-296 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YPO1936 d49a2cb497d7bb4d844f54051d10b9a3 386 Gene3D G3DSA:3.90.1150.10 247 384 8.8E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YPO1936 d49a2cb497d7bb4d844f54051d10b9a3 386 PANTHER PTHR11751 19 385 1.7E-121 T 22-04-2016 YPO1936 d49a2cb497d7bb4d844f54051d10b9a3 386 Gene3D G3DSA:3.40.640.10 58 246 1.7E-39 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YPO1936 d49a2cb497d7bb4d844f54051d10b9a3 386 SUPERFAMILY SSF53383 7 385 3.98E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YPO1936 d49a2cb497d7bb4d844f54051d10b9a3 386 PANTHER PTHR11751:SF294 19 385 1.7E-121 T 22-04-2016 YPO1936 d49a2cb497d7bb4d844f54051d10b9a3 386 Pfam PF00155 Aminotransferase class I and II 55 375 8.8E-31 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YPO0279 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 Pfam PF00005 ABC transporter 28 176 6.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO0279 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 PANTHER PTHR24220 13 262 6.1E-102 T 22-04-2016 YPO0279 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 SUPERFAMILY SSF52540 11 241 7.21E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0279 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 Gene3D G3DSA:3.40.50.300 13 246 3.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0279 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO0279 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 SMART SM00382 36 225 5.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0279 a2ec89fb7ed0d44f251f7f94b59f2d5f 266 PANTHER PTHR24220:SF558 13 262 6.1E-102 T 22-04-2016 YPO1484 ab9bc3fc415e3375ebf47e5aae60fc71 361 PANTHER PTHR37465:SF1 2 359 6.2E-71 T 22-04-2016 YPO1484 ab9bc3fc415e3375ebf47e5aae60fc71 361 Pfam PF05488 PAAR motif 18 73 1.1E-7 T 22-04-2016 IPR008727 PAAR motif YPO1484 ab9bc3fc415e3375ebf47e5aae60fc71 361 Pfam PF15607 Bacterial toxin 44 205 312 1.9E-26 T 22-04-2016 IPR028946 Bacterial toxin 44 YPO1484 ab9bc3fc415e3375ebf47e5aae60fc71 361 PANTHER PTHR37465 2 359 6.2E-71 T 22-04-2016 YPO2108 0fba62855a0cb842931a1489604a5325 370 PIRSF PIRSF034565 6 370 6.7E-176 T 22-04-2016 IPR017029 Putative phage head morphogenesis protein YPO2707 4665f03771e5ccc420aeb8a3ed513cc9 218 SMART SM00248 76 105 2400.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YPO2707 4665f03771e5ccc420aeb8a3ed513cc9 218 SMART SM00248 43 72 600.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YPO2707 4665f03771e5ccc420aeb8a3ed513cc9 218 SMART SM00248 143 172 0.6 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YPO2707 4665f03771e5ccc420aeb8a3ed513cc9 218 SMART SM00248 110 139 460.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YPO2707 4665f03771e5ccc420aeb8a3ed513cc9 218 PANTHER PTHR24198:SF36 31 202 1.5E-18 T 22-04-2016 YPO2707 4665f03771e5ccc420aeb8a3ed513cc9 218 PANTHER PTHR24198 31 202 1.5E-18 T 22-04-2016 YPO2707 4665f03771e5ccc420aeb8a3ed513cc9 218 Gene3D G3DSA:1.25.40.20 15 180 9.4E-25 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain YPO2707 4665f03771e5ccc420aeb8a3ed513cc9 218 SUPERFAMILY SSF48403 15 188 1.29E-30 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain YPO3612 76fbf8924b69c8478a5892194244c42c 135 SMART SM00530 21 76 2.3E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO3612 76fbf8924b69c8478a5892194244c42c 135 Pfam PF01381 Helix-turn-helix 22 76 1.2E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO3612 76fbf8924b69c8478a5892194244c42c 135 PANTHER PTHR10245 3 132 3.5E-52 T 22-04-2016 YPO3612 76fbf8924b69c8478a5892194244c42c 135 Gene3D G3DSA:1.10.260.40 14 80 5.4E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3612 76fbf8924b69c8478a5892194244c42c 135 SUPERFAMILY SSF47413 17 83 2.25E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO3612 76fbf8924b69c8478a5892194244c42c 135 PANTHER PTHR10245:SF43 3 132 3.5E-52 T 22-04-2016 YPO2511 1943185fbda7494b50a540868fa2e8ec 375 SUPERFAMILY SSF48452 71 167 3.4E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2511 1943185fbda7494b50a540868fa2e8ec 375 Gene3D G3DSA:1.25.40.10 85 168 4.4E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO2511 1943185fbda7494b50a540868fa2e8ec 375 PANTHER PTHR30336:SF3 82 375 1.1E-194 T 22-04-2016 YPO2511 1943185fbda7494b50a540868fa2e8ec 375 Gene3D G3DSA:3.40.50.620 200 318 4.2E-19 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2511 1943185fbda7494b50a540868fa2e8ec 375 PANTHER PTHR30336 82 375 1.1E-194 T 22-04-2016 YPO2511 1943185fbda7494b50a540868fa2e8ec 375 Pfam PF02698 DUF218 domain 204 320 9.8E-22 T 22-04-2016 IPR003848 Domain of unknown function DUF218 YPO0986 33a2b6572008272a44048a0977fc8206 458 Pfam PF10503 Esterase PHB depolymerase 290 341 6.0E-5 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 YPO0986 33a2b6572008272a44048a0977fc8206 458 PANTHER PTHR10655:SF24 149 444 3.9E-96 T 22-04-2016 YPO0986 33a2b6572008272a44048a0977fc8206 458 SUPERFAMILY SSF53474 187 392 1.2E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0986 33a2b6572008272a44048a0977fc8206 458 Gene3D G3DSA:3.40.50.1820 174 405 4.1E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO0986 33a2b6572008272a44048a0977fc8206 458 PANTHER PTHR10655 149 444 3.9E-96 T 22-04-2016 YPO0001 43a4ab7b81d5c1e934889625011c9261 146 Pfam PF00258 Flavodoxin 7 138 3.4E-28 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YPO0001 43a4ab7b81d5c1e934889625011c9261 146 PANTHER PTHR19384 1 146 8.4E-63 T 22-04-2016 YPO0001 43a4ab7b81d5c1e934889625011c9261 146 SUPERFAMILY SSF52218 1 146 2.86E-41 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO0001 43a4ab7b81d5c1e934889625011c9261 146 PANTHER PTHR19384:SF81 1 146 8.4E-63 T 22-04-2016 YPO0001 43a4ab7b81d5c1e934889625011c9261 146 Gene3D G3DSA:3.40.50.360 1 146 1.4E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO0001 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 82 92 3.0E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO0001 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 5 18 3.0E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO0001 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 51 62 3.0E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO0001 43a4ab7b81d5c1e934889625011c9261 146 PRINTS PR00369 Flavodoxin signature 106 125 3.0E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YPO3777 502143d9bba060312c92054fac12ce10 220 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 19.365 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YPO3777 502143d9bba060312c92054fac12ce10 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.2E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 YPO3777 502143d9bba060312c92054fac12ce10 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.2E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 YPO3777 502143d9bba060312c92054fac12ce10 220 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.2E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 YPO3777 502143d9bba060312c92054fac12ce10 220 PANTHER PTHR33162 2 195 1.4E-98 T 22-04-2016 YPO3777 502143d9bba060312c92054fac12ce10 220 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.6E-32 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YPO3777 502143d9bba060312c92054fac12ce10 220 PANTHER PTHR33162:SF4 2 195 1.4E-98 T 22-04-2016 YPO2168 9b272fd0c12ddcb3fd5d8b4698dee850 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.2E-27 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPO2168 9b272fd0c12ddcb3fd5d8b4698dee850 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 YPO2168 9b272fd0c12ddcb3fd5d8b4698dee850 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 6.5E-105 T 22-04-2016 YPO2168 9b272fd0c12ddcb3fd5d8b4698dee850 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 YPO2168 9b272fd0c12ddcb3fd5d8b4698dee850 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 1.9E-89 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 YPO2168 9b272fd0c12ddcb3fd5d8b4698dee850 268 SUPERFAMILY SSF56219 1 268 1.83E-88 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPO2168 9b272fd0c12ddcb3fd5d8b4698dee850 268 PANTHER PTHR22748:SF7 1 268 1.5E-139 T 22-04-2016 YPO2168 9b272fd0c12ddcb3fd5d8b4698dee850 268 PANTHER PTHR22748 1 268 1.5E-139 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 YPO2168 9b272fd0c12ddcb3fd5d8b4698dee850 268 Gene3D G3DSA:3.60.10.10 1 267 6.3E-86 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YPO3489 cd9ae0fa8be8e53c473bfe648b2f363e 294 PANTHER PTHR23083 31 38 1.4E-25 T 22-04-2016 YPO3489 cd9ae0fa8be8e53c473bfe648b2f363e 294 PANTHER PTHR23083 58 287 1.4E-25 T 22-04-2016 YPO3489 cd9ae0fa8be8e53c473bfe648b2f363e 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.2E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 YPO3489 cd9ae0fa8be8e53c473bfe648b2f363e 294 SMART SM00028 62 95 0.0033 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO3489 cd9ae0fa8be8e53c473bfe648b2f363e 294 SMART SM00028 96 129 2.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO3489 cd9ae0fa8be8e53c473bfe648b2f363e 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.022 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YPO3489 cd9ae0fa8be8e53c473bfe648b2f363e 294 SUPERFAMILY SSF48452 27 283 9.36E-75 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3489 cd9ae0fa8be8e53c473bfe648b2f363e 294 PIRSF PIRSF004654 1 292 1.4E-116 T 22-04-2016 IPR023605 Lipoprotein NlpI YPO3489 cd9ae0fa8be8e53c473bfe648b2f363e 294 Gene3D G3DSA:1.25.40.10 49 288 1.3E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1979 10872f65d1e5d1756b3390f7b6e2f987 338 SUPERFAMILY SSF51735 1 330 8.19E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1979 10872f65d1e5d1756b3390f7b6e2f987 338 Gene3D G3DSA:3.40.50.720 1 183 1.1E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1979 10872f65d1e5d1756b3390f7b6e2f987 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 233 3.9E-33 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YPO1979 10872f65d1e5d1756b3390f7b6e2f987 338 PANTHER PTHR10366:SF409 289 336 1.6E-203 T 22-04-2016 YPO1979 10872f65d1e5d1756b3390f7b6e2f987 338 PANTHER PTHR10366:SF409 2 265 1.6E-203 T 22-04-2016 YPO1979 10872f65d1e5d1756b3390f7b6e2f987 338 PANTHER PTHR10366 289 336 1.6E-203 T 22-04-2016 YPO1979 10872f65d1e5d1756b3390f7b6e2f987 338 PANTHER PTHR10366 2 265 1.6E-203 T 22-04-2016 YPO1979 10872f65d1e5d1756b3390f7b6e2f987 338 Gene3D G3DSA:3.90.25.10 184 335 5.9E-13 T 22-04-2016 YPO2934 d403c294ac943a8c9af4f669877573e1 449 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 447 3.3E-138 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO2934 d403c294ac943a8c9af4f669877573e1 449 PANTHER PTHR35566 1 449 0.0 T 22-04-2016 YPO2934 d403c294ac943a8c9af4f669877573e1 449 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 1.1E-140 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO2934 d403c294ac943a8c9af4f669877573e1 449 PANTHER PTHR35566:SF2 1 449 0.0 T 22-04-2016 YPO2476 6d1ce2fb5143cba8ab871caf1172f722 291 PANTHER PTHR32243 3 291 1.8E-170 T 22-04-2016 YPO2476 6d1ce2fb5143cba8ab871caf1172f722 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 278 2.8E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2476 6d1ce2fb5143cba8ab871caf1172f722 291 PANTHER PTHR32243:SF27 3 291 1.8E-170 T 22-04-2016 YPO2476 6d1ce2fb5143cba8ab871caf1172f722 291 Gene3D G3DSA:1.10.3720.10 59 287 1.1E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2476 6d1ce2fb5143cba8ab871caf1172f722 291 SUPERFAMILY SSF161098 53 277 2.73E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0859 589c07aca832cbb11a7a1415a32532f3 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 328 3.3E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO0859 589c07aca832cbb11a7a1415a32532f3 336 PANTHER PTHR32196:SF21 44 336 4.2E-111 T 22-04-2016 YPO0859 589c07aca832cbb11a7a1415a32532f3 336 PANTHER PTHR32196 44 336 4.2E-111 T 22-04-2016 YPO3179 9f85ea1aba9f6537569324de4ee61718 161 PANTHER PTHR36305 1 161 1.5E-78 T 22-04-2016 YPO3179 9f85ea1aba9f6537569324de4ee61718 161 SUPERFAMILY SSF101307 8 157 1.14E-50 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 YPO3179 9f85ea1aba9f6537569324de4ee61718 161 Gene3D G3DSA:1.10.3760.10 73 151 4.2E-4 T 22-04-2016 IPR027416 YutG-like domain YPO3179 9f85ea1aba9f6537569324de4ee61718 161 PIRSF PIRSF006162 4 161 4.5E-62 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YPO3179 9f85ea1aba9f6537569324de4ee61718 161 Pfam PF04608 Phosphatidylglycerophosphatase A 15 155 8.4E-55 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 YPO1904 3ef987a9c575c3d36a7d0b8a6dec8af4 61 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 54 8.5E-26 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) YPO1904 3ef987a9c575c3d36a7d0b8a6dec8af4 61 PANTHER PTHR36154 1 58 1.4E-16 T 22-04-2016 YPO0274 97f6a7ce92d8fbdb59b3e5953bbe00fc 404 PANTHER PTHR30574:SF6 1 344 1.6E-258 T 22-04-2016 YPO0274 97f6a7ce92d8fbdb59b3e5953bbe00fc 404 PANTHER PTHR30574 1 344 1.6E-258 T 22-04-2016 YPO0274 97f6a7ce92d8fbdb59b3e5953bbe00fc 404 Pfam PF04143 Sulphur transport 5 160 9.3E-25 T 22-04-2016 IPR007272 Sulphur transport domain YPO0274 97f6a7ce92d8fbdb59b3e5953bbe00fc 404 Pfam PF04143 Sulphur transport 237 394 1.0E-24 T 22-04-2016 IPR007272 Sulphur transport domain YPO3111 05dbf3556760569d72901631177a03f8 427 PANTHER PTHR10742 14 411 1.3E-27 T 22-04-2016 YPO3111 05dbf3556760569d72901631177a03f8 427 SUPERFAMILY SSF51905 13 294 2.76E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3111 05dbf3556760569d72901631177a03f8 427 Pfam PF13450 NAD(P)-binding Rossmann-like domain 15 79 1.4E-7 T 22-04-2016 YPO3111 05dbf3556760569d72901631177a03f8 427 Gene3D G3DSA:3.50.50.60 197 295 2.4E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO3111 05dbf3556760569d72901631177a03f8 427 Gene3D G3DSA:3.50.50.60 14 106 2.4E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YPO0140 45ce53a4442fb25d1dfc86181590990f 135 Gene3D G3DSA:3.10.290.10 9 105 6.0E-39 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO0140 45ce53a4442fb25d1dfc86181590990f 135 Pfam PF01479 S4 domain 11 57 1.0E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO0140 45ce53a4442fb25d1dfc86181590990f 135 PIRSF PIRSF016821 8 135 1.1E-42 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 YPO0140 45ce53a4442fb25d1dfc86181590990f 135 SUPERFAMILY SSF55174 10 106 7.59E-31 T 22-04-2016 YPO0140 45ce53a4442fb25d1dfc86181590990f 135 PANTHER PTHR11079 4 64 1.5E-29 T 22-04-2016 YPO0140 45ce53a4442fb25d1dfc86181590990f 135 PANTHER PTHR11079 111 117 1.5E-29 T 22-04-2016 YPO0140 45ce53a4442fb25d1dfc86181590990f 135 SMART SM00363 11 72 9.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YPO0140 45ce53a4442fb25d1dfc86181590990f 135 PANTHER PTHR11079:SF70 4 64 1.5E-29 T 22-04-2016 YPO0140 45ce53a4442fb25d1dfc86181590990f 135 PANTHER PTHR11079:SF70 111 117 1.5E-29 T 22-04-2016 YPO1153 ba592b4a440304ac04ac4fa1a673b420 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 20 266 29.225 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 YPO1153 ba592b4a440304ac04ac4fa1a673b420 267 Gene3D G3DSA:3.40.50.150 21 191 5.0E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1153 ba592b4a440304ac04ac4fa1a673b420 267 PANTHER PTHR10108:SF855 228 263 1.3E-50 T 22-04-2016 YPO1153 ba592b4a440304ac04ac4fa1a673b420 267 PANTHER PTHR10108:SF855 28 177 1.3E-50 T 22-04-2016 YPO1153 ba592b4a440304ac04ac4fa1a673b420 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 28 266 1.1E-65 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 YPO1153 ba592b4a440304ac04ac4fa1a673b420 267 Pfam PF08241 Methyltransferase domain 63 154 1.4E-24 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YPO1153 ba592b4a440304ac04ac4fa1a673b420 267 SUPERFAMILY SSF53335 26 261 8.59E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1153 ba592b4a440304ac04ac4fa1a673b420 267 PANTHER PTHR10108 228 263 1.3E-50 T 22-04-2016 YPO1153 ba592b4a440304ac04ac4fa1a673b420 267 PANTHER PTHR10108 28 177 1.3E-50 T 22-04-2016 YPO3238 1f3ecbb0d1b05592e076cb737ead17d9 266 SMART SM00900 151 249 1.4E-36 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YPO3238 1f3ecbb0d1b05592e076cb737ead17d9 266 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 10 261 36.735 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 YPO3238 1f3ecbb0d1b05592e076cb737ead17d9 266 Pfam PF04205 FMN-binding domain 151 246 6.2E-17 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YPO3238 1f3ecbb0d1b05592e076cb737ead17d9 266 PANTHER PTHR37838 2 266 4.5E-119 T 22-04-2016 YPO3238 1f3ecbb0d1b05592e076cb737ead17d9 266 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 9 257 5.1E-102 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 YPO3238 1f3ecbb0d1b05592e076cb737ead17d9 266 PANTHER PTHR37838:SF1 2 266 4.5E-119 T 22-04-2016 YPO3238 1f3ecbb0d1b05592e076cb737ead17d9 266 PIRSF PIRSF009437 2 264 7.2E-102 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 YPO1615 c12852cccd0de8160b7c6b9329141d40 343 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 YPO1615 c12852cccd0de8160b7c6b9329141d40 343 SUPERFAMILY SSF51445 3 317 4.0E-86 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO1615 c12852cccd0de8160b7c6b9329141d40 343 PANTHER PTHR30480 4 322 5.7E-143 T 22-04-2016 YPO1615 c12852cccd0de8160b7c6b9329141d40 343 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.643 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 YPO1615 c12852cccd0de8160b7c6b9329141d40 343 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 11 292 1.0E-94 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO1615 c12852cccd0de8160b7c6b9329141d40 343 PANTHER PTHR30480:SF7 4 322 5.7E-143 T 22-04-2016 YPO1615 c12852cccd0de8160b7c6b9329141d40 343 Gene3D G3DSA:3.20.20.300 3 319 2.3E-96 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 709 726 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 PANTHER PTHR32552 17 726 0.0 T 22-04-2016 YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 Gene3D G3DSA:2.170.130.10 23 143 1.4E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 PANTHER PTHR32552:SF30 17 726 0.0 T 22-04-2016 YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 140 9.7E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 Pfam PF00593 TonB dependent receptor 479 722 4.2E-17 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 SUPERFAMILY SSF56935 25 430 5.13E-92 T 22-04-2016 YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 SUPERFAMILY SSF56935 461 724 5.13E-92 T 22-04-2016 YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 Gene3D G3DSA:2.40.170.20 144 726 4.0E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YPO0994 754c62554d940b1aa79d11fc33ca9d47 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 40 726 1.6E-128 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YPO2823 1166f89c1b01b145da1791c91c840b95 60 PANTHER PTHR36154 1 58 1.5E-15 T 22-04-2016 YPO2823 1166f89c1b01b145da1791c91c840b95 60 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 4 55 7.6E-5 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) YPO0729 771eee27b9b60a97a27510e20edc795e 221 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 218 25.355 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO0729 771eee27b9b60a97a27510e20edc795e 221 PRINTS PR01008 Flagellar L-ring protein signature 160 176 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO0729 771eee27b9b60a97a27510e20edc795e 221 PRINTS PR01008 Flagellar L-ring protein signature 66 78 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO0729 771eee27b9b60a97a27510e20edc795e 221 PRINTS PR01008 Flagellar L-ring protein signature 134 149 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO0729 771eee27b9b60a97a27510e20edc795e 221 PRINTS PR01008 Flagellar L-ring protein signature 181 195 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO0729 771eee27b9b60a97a27510e20edc795e 221 PRINTS PR01008 Flagellar L-ring protein signature 197 211 4.3E-23 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO0729 771eee27b9b60a97a27510e20edc795e 221 Pfam PF02107 Flagellar L-ring protein 45 218 6.2E-58 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YPO0729 771eee27b9b60a97a27510e20edc795e 221 PANTHER PTHR34933:SF2 1 219 8.0E-120 T 22-04-2016 YPO0729 771eee27b9b60a97a27510e20edc795e 221 PANTHER PTHR34933 1 219 8.0E-120 T 22-04-2016 YPO2646 48a23a23f7e76e2df74b5ae26cc9655e 388 SUPERFAMILY SSF161098 174 356 2.88E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2646 48a23a23f7e76e2df74b5ae26cc9655e 388 Gene3D G3DSA:1.10.3720.10 171 357 3.4E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2646 48a23a23f7e76e2df74b5ae26cc9655e 388 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 360 2.6E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2646 48a23a23f7e76e2df74b5ae26cc9655e 388 PANTHER PTHR30177 92 376 1.5E-142 T 22-04-2016 YPO2646 48a23a23f7e76e2df74b5ae26cc9655e 388 PANTHER PTHR30177:SF2 92 376 1.5E-142 T 22-04-2016 YPO3479 c869f32e94e2333fe4129edb7b712a59 331 SUPERFAMILY SSF51391 11 160 3.66E-5 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YPO3479 c869f32e94e2333fe4129edb7b712a59 331 Pfam PF01136 Peptidase family U32 76 330 4.5E-67 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO3479 c869f32e94e2333fe4129edb7b712a59 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YPO3479 c869f32e94e2333fe4129edb7b712a59 331 PANTHER PTHR30217 240 330 7.2E-227 T 22-04-2016 YPO3479 c869f32e94e2333fe4129edb7b712a59 331 PANTHER PTHR30217 1 218 7.2E-227 T 22-04-2016 YPO3479 c869f32e94e2333fe4129edb7b712a59 331 PANTHER PTHR30217:SF3 240 330 7.2E-227 T 22-04-2016 YPO3479 c869f32e94e2333fe4129edb7b712a59 331 PANTHER PTHR30217:SF3 1 218 7.2E-227 T 22-04-2016 YPO2009 3563c3bdc8bce5240cee69c1f7e6629a 169 PANTHER PTHR32552:SF23 26 169 8.4E-78 T 22-04-2016 YPO2009 3563c3bdc8bce5240cee69c1f7e6629a 169 SUPERFAMILY SSF53098 27 166 2.58E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2009 3563c3bdc8bce5240cee69c1f7e6629a 169 PANTHER PTHR32552 26 169 8.4E-78 T 22-04-2016 YPO2009 3563c3bdc8bce5240cee69c1f7e6629a 169 Gene3D G3DSA:3.30.420.10 28 162 9.9E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YPO2009 3563c3bdc8bce5240cee69c1f7e6629a 169 Pfam PF00665 Integrase core domain 26 124 3.1E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YPO2644 d16e7cb85e10926ce7975baf55bf2c12 245 Pfam PF01522 Polysaccharide deacetylase 10 96 3.8E-8 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO2644 d16e7cb85e10926ce7975baf55bf2c12 245 PANTHER PTHR10587:SF72 3 237 5.0E-117 T 22-04-2016 YPO2644 d16e7cb85e10926ce7975baf55bf2c12 245 SUPERFAMILY SSF88713 1 239 7.51E-67 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YPO2644 d16e7cb85e10926ce7975baf55bf2c12 245 Gene3D G3DSA:3.20.20.370 1 239 1.7E-79 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YPO2644 d16e7cb85e10926ce7975baf55bf2c12 245 PANTHER PTHR10587 3 237 5.0E-117 T 22-04-2016 YPO1770 98895e449c1d7d6e84e03baf6ac73c2c 165 SUPERFAMILY SSF50475 11 162 5.89E-44 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPO1770 98895e449c1d7d6e84e03baf6ac73c2c 165 Gene3D G3DSA:2.30.110.10 11 163 1.3E-45 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YPO1770 98895e449c1d7d6e84e03baf6ac73c2c 165 PANTHER PTHR30466:SF2 1 164 1.7E-83 T 22-04-2016 YPO1770 98895e449c1d7d6e84e03baf6ac73c2c 165 SMART SM00903 15 162 3.7E-49 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 YPO1770 98895e449c1d7d6e84e03baf6ac73c2c 165 Pfam PF01613 Flavin reductase like domain 15 163 2.9E-24 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 YPO1770 98895e449c1d7d6e84e03baf6ac73c2c 165 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 164 1.1E-75 T 22-04-2016 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 UniPathway: UPA00208 YPO1770 98895e449c1d7d6e84e03baf6ac73c2c 165 PANTHER PTHR30466 1 164 1.7E-83 T 22-04-2016 YPO3363 6d4cb754275994ea8dede80990d14cf7 105 Pfam PF12084 Protein of unknown function (DUF3561) 1 104 7.2E-47 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 YPO3363 6d4cb754275994ea8dede80990d14cf7 105 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 1 105 1.0E-54 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 YPO0260a 088530e06a9f075ffde068419e75bd7a 71 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 3 71 9.3E-21 T 22-04-2016 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 YPO0260a 088530e06a9f075ffde068419e75bd7a 71 SUPERFAMILY SSF140129 1 67 8.11E-18 T 22-04-2016 YPO0260a 088530e06a9f075ffde068419e75bd7a 71 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 1 71 2.4E-31 T 22-04-2016 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 YPO2401 e619165d83a7a63429af46117a99bc58 441 SUPERFAMILY SSF101960 48 436 1.06E-112 T 22-04-2016 YPO2401 e619165d83a7a63429af46117a99bc58 441 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 150 427 4.4E-88 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 YPO2401 e619165d83a7a63429af46117a99bc58 441 PANTHER PTHR30508 48 439 2.4E-152 T 22-04-2016 YPO2401 e619165d83a7a63429af46117a99bc58 441 Pfam PF01458 Uncharacterized protein family (UPF0051) 188 411 4.2E-74 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YPO2401 e619165d83a7a63429af46117a99bc58 441 PANTHER PTHR30508:SF0 48 439 2.4E-152 T 22-04-2016 YPO0620 fc106bbad2dc449ccc99027908b55c23 108 Pfam PF17090 Uncharacterised protein family 43 106 4.7E-11 T 22-04-2016 IPR031381 Uncharacterised protein YtcA YPO0746 bf7668f10766a1f8f62a7edcccb9694e 288 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 236 1.7E-11 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YPO0746 bf7668f10766a1f8f62a7edcccb9694e 288 PANTHER PTHR30433:SF4 1 280 1.0E-98 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YPO0746 bf7668f10766a1f8f62a7edcccb9694e 288 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 9.7E-113 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YPO0746 bf7668f10766a1f8f62a7edcccb9694e 288 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site YPO0746 bf7668f10766a1f8f62a7edcccb9694e 288 PANTHER PTHR30433 1 280 1.0E-98 T 22-04-2016 YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 SUPERFAMILY SSF109998 203 240 1.44E-33 T 22-04-2016 IPR027304 Trigger factor/SurA domain YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 SUPERFAMILY SSF109998 39 169 1.44E-33 T 22-04-2016 IPR027304 Trigger factor/SurA domain YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 PANTHER PTHR10657 1 175 4.1E-249 T 22-04-2016 YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 PANTHER PTHR10657 203 518 4.1E-249 T 22-04-2016 YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 Gene3D G3DSA:3.10.50.40 261 382 6.6E-28 T 22-04-2016 YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 Pfam PF13624 SurA N-terminal domain 1 166 5.8E-50 T 22-04-2016 YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 PANTHER PTHR10657:SF13 1 175 4.1E-249 T 22-04-2016 YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 PANTHER PTHR10657:SF13 203 518 4.1E-249 T 22-04-2016 YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 Pfam PF13145 PPIC-type PPIASE domain 249 370 1.9E-23 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 SUPERFAMILY SSF54534 225 357 3.47E-22 T 22-04-2016 YPO3153 2c02dc23f046703af0ff57fe70a89f48 628 Gene3D G3DSA:1.10.3120.10 42 124 5.6E-5 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YPO1016 65a45e1b8a4158650227a9878b8fda64 156 Pfam PF10713 Protein of unknown function (DUF2509) 18 154 1.2E-42 T 22-04-2016 IPR019652 Protein of unknown function DUF2509 YPO1440 bd7e99934fdfd5cd920df31d1c3ddc3d 661 Gene3D G3DSA:3.40.50.300 475 651 1.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1440 bd7e99934fdfd5cd920df31d1c3ddc3d 661 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 2.3E-65 T 22-04-2016 IPR022161 DNA helicase IV, N-terminal domain YPO1440 bd7e99934fdfd5cd920df31d1c3ddc3d 661 PANTHER PTHR11070 99 659 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YPO1440 bd7e99934fdfd5cd920df31d1c3ddc3d 661 SUPERFAMILY SSF52540 195 652 1.37E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1440 bd7e99934fdfd5cd920df31d1c3ddc3d 661 Gene3D G3DSA:3.40.50.300 195 333 5.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1440 bd7e99934fdfd5cd920df31d1c3ddc3d 661 Gene3D G3DSA:3.40.50.300 372 469 5.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1440 bd7e99934fdfd5cd920df31d1c3ddc3d 661 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 467 5.8E-39 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YPO1440 bd7e99934fdfd5cd920df31d1c3ddc3d 661 PANTHER PTHR11070:SF26 99 659 0.0 T 22-04-2016 YPO1440 bd7e99934fdfd5cd920df31d1c3ddc3d 661 Pfam PF13361 UvrD-like helicase C-terminal domain 564 636 4.9E-13 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YPO2874 6c9cc5766dbdec78b26edfc2a0cb6d4c 318 Pfam PF03547 Membrane transport protein 14 150 1.6E-8 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YPO2874 6c9cc5766dbdec78b26edfc2a0cb6d4c 318 Pfam PF03547 Membrane transport protein 169 307 3.8E-10 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YPO2874 6c9cc5766dbdec78b26edfc2a0cb6d4c 318 PANTHER PTHR31752 90 314 9.5E-112 T 22-04-2016 YPO2874 6c9cc5766dbdec78b26edfc2a0cb6d4c 318 PANTHER PTHR31752:SF13 90 314 9.5E-112 T 22-04-2016 YPO4112 57a1c11d3b798748d2e5787564dac035 223 PANTHER PTHR35024:SF2 2 216 1.7E-112 T 22-04-2016 YPO4112 57a1c11d3b798748d2e5787564dac035 223 PANTHER PTHR35024 2 216 1.7E-112 T 22-04-2016 YPO4112 57a1c11d3b798748d2e5787564dac035 223 Pfam PF04519 Polymer-forming cytoskeletal 87 183 1.3E-17 T 22-04-2016 IPR007607 Protein of unknown function DUF583 YPO2546 2aa43b20da3c7458c4462c4b08fa1675 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 20.052 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YPO2546 2aa43b20da3c7458c4462c4b08fa1675 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 1.3E-22 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YPO2546 2aa43b20da3c7458c4462c4b08fa1675 100 PANTHER PTHR11434 3 100 1.4E-66 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YPO2546 2aa43b20da3c7458c4462c4b08fa1675 100 PANTHER PTHR11434:SF4 3 100 1.4E-66 T 22-04-2016 YPO3699 4ab295a4cb80c05ece8157dcdac214a5 158 SUPERFAMILY SSF69318 40 109 2.35E-7 T 22-04-2016 YPO3699 4ab295a4cb80c05ece8157dcdac214a5 158 Pfam PF16743 Periplasmic lysozyme inhibitor of I-type lysozyme 25 147 4.6E-43 T 22-04-2016 IPR031948 Periplasmic lysozyme inhibitor of I-type lysozyme YPO2999 cedb589de3768756bf0178781466de47 401 PANTHER PTHR30572:SF3 1 369 3.5E-161 T 22-04-2016 YPO2999 cedb589de3768756bf0178781466de47 401 SUPERFAMILY SSF111369 54 265 1.11E-20 T 22-04-2016 YPO2999 cedb589de3768756bf0178781466de47 401 Gene3D G3DSA:2.40.50.100 63 96 2.1E-17 T 22-04-2016 YPO2999 cedb589de3768756bf0178781466de47 401 Gene3D G3DSA:2.40.50.100 185 217 2.1E-17 T 22-04-2016 YPO2999 cedb589de3768756bf0178781466de47 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 269 3.7E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO2999 cedb589de3768756bf0178781466de47 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 381 1.5E-48 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YPO2999 cedb589de3768756bf0178781466de47 401 PANTHER PTHR30572 1 369 3.5E-161 T 22-04-2016 YPO3307 a349d14299f68b80755c3040a235e6ea 356 Gene3D G3DSA:3.40.50.300 28 270 5.6E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3307 a349d14299f68b80755c3040a235e6ea 356 Gene3D G3DSA:3.30.250.10 272 328 8.9E-28 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal YPO3307 a349d14299f68b80755c3040a235e6ea 356 SUPERFAMILY SSF54752 272 327 1.96E-20 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal YPO3307 a349d14299f68b80755c3040a235e6ea 356 PANTHER PTHR22942:SF1 1 337 3.9E-205 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO3307 a349d14299f68b80755c3040a235e6ea 356 PANTHER PTHR22942 1 337 3.9E-205 T 22-04-2016 YPO3307 a349d14299f68b80755c3040a235e6ea 356 PRINTS PR00142 RecA protein signature 212 240 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO3307 a349d14299f68b80755c3040a235e6ea 356 PRINTS PR00142 RecA protein signature 167 196 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO3307 a349d14299f68b80755c3040a235e6ea 356 PRINTS PR00142 RecA protein signature 95 124 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO3307 a349d14299f68b80755c3040a235e6ea 356 PRINTS PR00142 RecA protein signature 129 158 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO3307 a349d14299f68b80755c3040a235e6ea 356 PRINTS PR00142 RecA protein signature 245 274 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO3307 a349d14299f68b80755c3040a235e6ea 356 PRINTS PR00142 RecA protein signature 299 316 1.2E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO3307 a349d14299f68b80755c3040a235e6ea 356 Pfam PF00154 recA bacterial DNA recombination protein 9 270 2.5E-141 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO3307 a349d14299f68b80755c3040a235e6ea 356 SMART SM00382 59 230 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3307 a349d14299f68b80755c3040a235e6ea 356 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 3.2E-170 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO3307 a349d14299f68b80755c3040a235e6ea 356 ProSitePatterns PS00321 recA signature. 215 223 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 YPO3307 a349d14299f68b80755c3040a235e6ea 356 SUPERFAMILY SSF52540 6 269 5.12E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3307 a349d14299f68b80755c3040a235e6ea 356 Hamap MF_00268 Protein RecA [recA]. 7 331 50.697 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YPO0804 4dedf112a87f60990a5f90893b8a4079 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 95 5.1E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0804 4dedf112a87f60990a5f90893b8a4079 238 Gene3D G3DSA:1.10.10.10 3 95 4.4E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0804 4dedf112a87f60990a5f90893b8a4079 238 SUPERFAMILY SSF46894 2 95 2.07E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO0804 4dedf112a87f60990a5f90893b8a4079 238 SMART SM00862 22 95 2.9E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0804 4dedf112a87f60990a5f90893b8a4079 238 PANTHER PTHR26402 4 238 2.1E-45 T 22-04-2016 YPO0804 4dedf112a87f60990a5f90893b8a4079 238 PANTHER PTHR26402:SF589 4 238 2.1E-45 T 22-04-2016 YPO0652 a868bf7e31aff251648b6f4f3cb87080 435 SUPERFAMILY SSF55154 1 218 1.8E-55 T 22-04-2016 IPR033469 CYTH-like domain YPO0652 a868bf7e31aff251648b6f4f3cb87080 435 PANTHER PTHR39569 2 435 8.0E-157 T 22-04-2016 YPO0652 a868bf7e31aff251648b6f4f3cb87080 435 SMART SM01118 2 202 9.8E-42 T 22-04-2016 IPR023577 CYTH domain YPO0652 a868bf7e31aff251648b6f4f3cb87080 435 Pfam PF01928 CYTH domain 4 196 3.6E-30 T 22-04-2016 IPR023577 CYTH domain YPO0652 a868bf7e31aff251648b6f4f3cb87080 435 Gene3D G3DSA:2.40.320.10 1 209 1.6E-39 T 22-04-2016 IPR023577 CYTH domain YPO0652 a868bf7e31aff251648b6f4f3cb87080 435 PANTHER PTHR39569:SF1 2 435 8.0E-157 T 22-04-2016 YPO3263 5343742174d168c20e8a4fd3d5578db8 399 SUPERFAMILY SSF103473 9 390 6.41E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO3263 5343742174d168c20e8a4fd3d5578db8 399 PANTHER PTHR23501:SF79 2 399 4.5E-219 T 22-04-2016 YPO3263 5343742174d168c20e8a4fd3d5578db8 399 Gene3D G3DSA:1.20.1250.20 219 389 9.4E-14 T 22-04-2016 YPO3263 5343742174d168c20e8a4fd3d5578db8 399 Gene3D G3DSA:1.20.1250.20 13 194 1.6E-26 T 22-04-2016 YPO3263 5343742174d168c20e8a4fd3d5578db8 399 PANTHER PTHR23501 2 399 4.5E-219 T 22-04-2016 YPO3263 5343742174d168c20e8a4fd3d5578db8 399 Pfam PF07690 Major Facilitator Superfamily 19 276 1.1E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO3694 8c8f2f814ecf1c5303e73918ea04ae38 128 Pfam PF07361 Cytochrome b562 25 128 5.6E-32 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YPO3694 8c8f2f814ecf1c5303e73918ea04ae38 128 SUPERFAMILY SSF47175 23 128 5.18E-36 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YPO3694 8c8f2f814ecf1c5303e73918ea04ae38 128 PIRSF PIRSF000029 1 128 1.8E-60 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YPO3694 8c8f2f814ecf1c5303e73918ea04ae38 128 Gene3D G3DSA:1.20.120.10 23 128 4.3E-40 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YPO2508 670bc43e41fc261eb6f49edc08973467 165 PANTHER PTHR23091:SF210 1 165 4.6E-54 T 22-04-2016 YPO2508 670bc43e41fc261eb6f49edc08973467 165 SUPERFAMILY SSF55729 1 160 1.05E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2508 670bc43e41fc261eb6f49edc08973467 165 Gene3D G3DSA:3.40.630.30 1 160 7.6E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO2508 670bc43e41fc261eb6f49edc08973467 165 PANTHER PTHR23091 1 165 4.6E-54 T 22-04-2016 YPO2508 670bc43e41fc261eb6f49edc08973467 165 Pfam PF13673 Acetyltransferase (GNAT) domain 37 136 7.2E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO0879 85bb15d4c69a779b008b3515fa1f7b90 108 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 16 103 2.4E-8 T 22-04-2016 IPR009241 Toxin HigB-like YPO0299 7d0f1f75ad0ecfea0514ba015ca1f8fa 191 PANTHER PTHR32097 1 191 2.9E-91 T 22-04-2016 YPO0299 7d0f1f75ad0ecfea0514ba015ca1f8fa 191 Gene3D G3DSA:2.60.60.30 22 184 2.6E-72 T 22-04-2016 YPO0299 7d0f1f75ad0ecfea0514ba015ca1f8fa 191 Pfam PF02342 TerD domain 1 187 2.3E-84 T 22-04-2016 IPR003325 TerD domain GO:0006950 YPO3602 a82f341f55302031c5ad3f8c0881c251 465 PANTHER PTHR37024 1 463 0.0 T 22-04-2016 YPO3602 a82f341f55302031c5ad3f8c0881c251 465 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 12 460 3.2E-158 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 YPO3602 a82f341f55302031c5ad3f8c0881c251 465 Pfam PF06812 ImpA, N-terminal, type VI secretion system 18 115 2.4E-11 T 22-04-2016 IPR010657 ImpA, N-terminal YPO3602 a82f341f55302031c5ad3f8c0881c251 465 PANTHER PTHR37024:SF2 1 463 0.0 T 22-04-2016 YPO3602 a82f341f55302031c5ad3f8c0881c251 465 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 218 457 3.4E-78 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 YPO1656 2608f8b608e62b1fc044d913a96e4b23 63 Pfam PF10781 Dextransucrase DSRB 1 60 9.0E-38 T 22-04-2016 IPR019717 Dextransucrase DSRB YPO1656 2608f8b608e62b1fc044d913a96e4b23 63 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 27.389 T 22-04-2016 IPR019717 Dextransucrase DSRB YPO1179 5534780c015cc6efd68a642d6e5890b0 113 Pfam PF01844 HNH endonuclease 27 75 8.2E-10 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 YPO1179 5534780c015cc6efd68a642d6e5890b0 113 SMART SM00507 15 70 3.0E-4 T 22-04-2016 IPR003615 HNH nuclease YPO1624 a1f00152dd38ddd23ae095932cda2cc1 179 PANTHER PTHR35603 1 177 4.0E-98 T 22-04-2016 YPO1624 a1f00152dd38ddd23ae095932cda2cc1 179 PANTHER PTHR35603:SF2 1 177 4.0E-98 T 22-04-2016 YPO1624 a1f00152dd38ddd23ae095932cda2cc1 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.8E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YPO0717 e34ede3bd225624dcd702bcca735fa11 446 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 437 6.7E-160 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO0717 e34ede3bd225624dcd702bcca735fa11 446 Gene3D G3DSA:3.40.50.300 130 392 9.2E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0717 e34ede3bd225624dcd702bcca735fa11 446 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 357 8.5E-67 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO0717 e34ede3bd225624dcd702bcca735fa11 446 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO0717 e34ede3bd225624dcd702bcca735fa11 446 SMART SM00382 159 341 3.5E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO0717 e34ede3bd225624dcd702bcca735fa11 446 PANTHER PTHR15184 1 437 3.6E-231 T 22-04-2016 YPO0717 e34ede3bd225624dcd702bcca735fa11 446 PANTHER PTHR15184:SF9 1 437 3.6E-231 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YPO0717 e34ede3bd225624dcd702bcca735fa11 446 SUPERFAMILY SSF52540 95 363 5.17E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1294 61b7d98b1c978477a7e1316676eaac94 524 Gene3D G3DSA:3.40.50.300 33 249 1.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1294 61b7d98b1c978477a7e1316676eaac94 524 SUPERFAMILY SSF52540 34 249 3.72E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1294 61b7d98b1c978477a7e1316676eaac94 524 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1294 61b7d98b1c978477a7e1316676eaac94 524 PANTHER PTHR24220 38 409 9.7E-189 T 22-04-2016 YPO1294 61b7d98b1c978477a7e1316676eaac94 524 PANTHER PTHR24220:SF392 38 409 9.7E-189 T 22-04-2016 YPO1294 61b7d98b1c978477a7e1316676eaac94 524 Pfam PF00005 ABC transporter 304 454 7.5E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1294 61b7d98b1c978477a7e1316676eaac94 524 Pfam PF00005 ABC transporter 54 199 9.6E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO1294 61b7d98b1c978477a7e1316676eaac94 524 SMART SM00382 308 503 0.0032 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1294 61b7d98b1c978477a7e1316676eaac94 524 SMART SM00382 61 250 1.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO1294 61b7d98b1c978477a7e1316676eaac94 524 SUPERFAMILY SSF52540 304 516 2.62E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1294 61b7d98b1c978477a7e1316676eaac94 524 Gene3D G3DSA:3.40.50.300 298 517 4.2E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1756 1ee267dbebcf429d562b8552261c37fd 295 PANTHER PTHR32502:SF5 8 294 4.9E-186 T 22-04-2016 YPO1756 1ee267dbebcf429d562b8552261c37fd 295 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 23 293 1.2E-142 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 YPO1756 1ee267dbebcf429d562b8552261c37fd 295 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 24 293 6.1E-112 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 YPO1756 1ee267dbebcf429d562b8552261c37fd 295 PANTHER PTHR32502 8 294 4.9E-186 T 22-04-2016 YPO2217 2b25ad630e90fa094f10b62eae337fe3 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 2.5E-44 T 22-04-2016 IPR019633 Protein of unknown function DUF2498 YPO2815 3256ca64bb06b6c706e56de6736bfb27 210 PANTHER PTHR10434:SF21 1 187 3.5E-57 T 22-04-2016 YPO2815 3256ca64bb06b6c706e56de6736bfb27 210 SMART SM00563 38 157 6.4E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPO2815 3256ca64bb06b6c706e56de6736bfb27 210 PANTHER PTHR10434 1 187 3.5E-57 T 22-04-2016 YPO2815 3256ca64bb06b6c706e56de6736bfb27 210 Pfam PF01553 Acyltransferase 24 154 4.4E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YPO2815 3256ca64bb06b6c706e56de6736bfb27 210 Gene3D G3DSA:3.40.1130.10 29 163 4.1E-16 T 22-04-2016 YPO2815 3256ca64bb06b6c706e56de6736bfb27 210 SUPERFAMILY SSF69593 5 184 8.37E-35 T 22-04-2016 YPO2362 50ee570cc0dc1171a3bce4fd3aa2ef06 196 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 5.9E-47 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 YPO2181 716b1d30738b3e2399bab674bbe47108 214 Pfam PF01914 MarC family integral membrane protein 10 210 5.3E-73 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPO2181 716b1d30738b3e2399bab674bbe47108 214 PANTHER PTHR33508 4 214 2.0E-103 T 22-04-2016 YPO2181 716b1d30738b3e2399bab674bbe47108 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 2.5E-79 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YPO2181 716b1d30738b3e2399bab674bbe47108 214 PANTHER PTHR33508:SF1 4 214 2.0E-103 T 22-04-2016 YPO0074 0fc2f049b776239777b1db8eeb885724 232 SMART SM00862 152 228 2.6E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0074 0fc2f049b776239777b1db8eeb885724 232 Gene3D G3DSA:1.10.10.10 129 230 2.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0074 0fc2f049b776239777b1db8eeb885724 232 SMART SM00448 2 111 7.7E-47 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0074 0fc2f049b776239777b1db8eeb885724 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.1E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO0074 0fc2f049b776239777b1db8eeb885724 232 Gene3D G3DSA:3.40.50.2300 2 125 8.5E-42 T 22-04-2016 YPO0074 0fc2f049b776239777b1db8eeb885724 232 PANTHER PTHR26402:SF117 2 231 2.7E-81 T 22-04-2016 YPO0074 0fc2f049b776239777b1db8eeb885724 232 Pfam PF00072 Response regulator receiver domain 4 112 9.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO0074 0fc2f049b776239777b1db8eeb885724 232 SUPERFAMILY SSF52172 1 188 6.55E-42 T 22-04-2016 IPR011006 CheY-like superfamily YPO0074 0fc2f049b776239777b1db8eeb885724 232 PANTHER PTHR26402 2 231 2.7E-81 T 22-04-2016 YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 218 233 1.5E-20 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 195 205 1.5E-20 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 138 155 1.5E-20 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 206 217 1.5E-20 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 Pfam PF01478 Type IV leader peptidase family 129 236 9.7E-24 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 PANTHER PTHR30487:SF0 1 31 3.9E-89 T 22-04-2016 YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 PANTHER PTHR30487:SF0 52 278 3.9E-89 T 22-04-2016 YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 13 118 7.4E-26 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 PANTHER PTHR30487 1 31 3.9E-89 T 22-04-2016 YPO0806 61d1961ea61633bf261b4dfc25633cbd 280 PANTHER PTHR30487 52 278 3.9E-89 T 22-04-2016 YPO2324 0226f01764f920d2bea4a723edb56a37 318 Pfam PF04198 Putative sugar-binding domain 58 314 4.0E-69 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YPO2324 0226f01764f920d2bea4a723edb56a37 318 SUPERFAMILY SSF100950 58 314 2.47E-64 T 22-04-2016 YPO2324 0226f01764f920d2bea4a723edb56a37 318 Pfam PF13384 Homeodomain-like domain 7 45 3.3E-6 T 22-04-2016 YPO2324 0226f01764f920d2bea4a723edb56a37 318 Gene3D G3DSA:3.40.50.1360 56 313 1.5E-71 T 22-04-2016 YPO2324 0226f01764f920d2bea4a723edb56a37 318 PANTHER PTHR34294 1 318 1.2E-164 T 22-04-2016 YPO2324 0226f01764f920d2bea4a723edb56a37 318 PANTHER PTHR34294:SF2 1 318 1.2E-164 T 22-04-2016 YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 234 1.6E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 PANTHER PTHR30251:SF5 6 244 1.5E-151 T 22-04-2016 YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 PRINTS PR00969 Pili chaperone signature 82 103 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 PRINTS PR00969 Pili chaperone signature 171 186 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 PRINTS PR00969 Pili chaperone signature 112 129 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 PRINTS PR00969 Pili chaperone signature 36 45 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 PRINTS PR00969 Pili chaperone signature 135 150 2.8E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 153 6.5E-39 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 PANTHER PTHR30251 6 244 1.5E-151 T 22-04-2016 YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 Gene3D G3DSA:2.60.40.360 36 154 3.7E-44 T 22-04-2016 IPR008962 PapD-like YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 SUPERFAMILY SSF49354 36 153 3.4E-38 T 22-04-2016 IPR008962 PapD-like YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 Gene3D G3DSA:2.60.40.1070 159 247 7.9E-24 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 SUPERFAMILY SSF49584 160 247 4.32E-20 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YPO4041 3328b1590b7c9a0360b4cb8502306ee9 255 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YPO3629 cd3d032ee3bde668d5d50b02cde25e30 451 PANTHER PTHR11119:SF43 1 446 4.3E-297 T 22-04-2016 YPO3629 cd3d032ee3bde668d5d50b02cde25e30 451 PANTHER PTHR11119 1 446 4.3E-297 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO3629 cd3d032ee3bde668d5d50b02cde25e30 451 Pfam PF00860 Permease family 28 411 8.2E-82 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO0594 9b0aebb8668e69fbc7815e9a5885ab9a 327 SMART SM00327 3 180 5.3E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0594 9b0aebb8668e69fbc7815e9a5885ab9a 327 Gene3D G3DSA:3.40.50.410 6 179 1.4E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0594 9b0aebb8668e69fbc7815e9a5885ab9a 327 SUPERFAMILY SSF53300 5 179 1.32E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0594 9b0aebb8668e69fbc7815e9a5885ab9a 327 Pfam PF15616 TerY-C metal binding domain 217 287 1.1E-22 T 22-04-2016 IPR028274 TerY-C metal binding domain YPO0594 9b0aebb8668e69fbc7815e9a5885ab9a 327 Pfam PF00092 von Willebrand factor type A domain 6 170 5.4E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO1506 0bbc48a4b2e63e833059c5fcc4311715 388 Pfam PF04235 Protein of unknown function (DUF418) 216 374 3.5E-46 T 22-04-2016 IPR007349 Domain of unknown function DUF418 YPO1506 0bbc48a4b2e63e833059c5fcc4311715 388 PANTHER PTHR30590:SF2 1 388 5.2E-149 T 22-04-2016 YPO1506 0bbc48a4b2e63e833059c5fcc4311715 388 PANTHER PTHR30590 1 388 5.2E-149 T 22-04-2016 YPO2333 f2ff96e64a13aab6da920760ef0253ea 112 PANTHER PTHR30561 2 112 1.4E-59 T 22-04-2016 YPO2333 f2ff96e64a13aab6da920760ef0253ea 112 SUPERFAMILY SSF103481 8 107 9.29E-20 T 22-04-2016 YPO2333 f2ff96e64a13aab6da920760ef0253ea 112 PANTHER PTHR30561:SF1 2 112 1.4E-59 T 22-04-2016 YPO2333 f2ff96e64a13aab6da920760ef0253ea 112 Pfam PF00893 Small Multidrug Resistance protein 5 96 2.6E-28 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YPO3436 548a6532d6c35c1be91a6206539fa0d3 364 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 134 5.2E-16 T 22-04-2016 YPO3436 548a6532d6c35c1be91a6206539fa0d3 364 Gene3D G3DSA:3.30.565.10 11 200 4.9E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3436 548a6532d6c35c1be91a6206539fa0d3 364 SUPERFAMILY SSF55874 22 194 4.98E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0391 1499bb89bf8de5bb5427f4361fbf254b 441 Pfam PF01555 DNA methylase 24 96 6.1E-6 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 YPO0391 1499bb89bf8de5bb5427f4361fbf254b 441 Gene3D G3DSA:3.40.50.150 42 107 1.4E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0391 1499bb89bf8de5bb5427f4361fbf254b 441 Gene3D G3DSA:3.40.50.150 241 274 1.4E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0391 1499bb89bf8de5bb5427f4361fbf254b 441 SUPERFAMILY SSF53335 61 284 2.68E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0391 1499bb89bf8de5bb5427f4361fbf254b 441 PANTHER PTHR13370 2 156 4.4E-16 T 22-04-2016 YPO3706 2057e8de581ed1fae9dc4a9cd68fb3cd 493 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 491 4.3E-210 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO3706 2057e8de581ed1fae9dc4a9cd68fb3cd 493 PANTHER PTHR35565:SF1 1 493 0.0 T 22-04-2016 YPO3706 2057e8de581ed1fae9dc4a9cd68fb3cd 493 PANTHER PTHR35565 1 493 0.0 T 22-04-2016 YPO3706 2057e8de581ed1fae9dc4a9cd68fb3cd 493 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 491 2.7E-175 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO0757 5c65c3b8a251e84cbf489f83b73fce71 387 SUPERFAMILY SSF51445 6 334 8.6E-52 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YPO0757 5c65c3b8a251e84cbf489f83b73fce71 387 Gene3D G3DSA:3.20.20.80 14 334 2.8E-47 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YPO0757 5c65c3b8a251e84cbf489f83b73fce71 387 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 30 295 6.0E-12 T 22-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 YPO0992 3517b7d754f922ba5b2dfcd05de99089 582 PANTHER PTHR34384:SF2 1 582 0.0 T 22-04-2016 YPO0992 3517b7d754f922ba5b2dfcd05de99089 582 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 551 7.9E-35 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YPO0992 3517b7d754f922ba5b2dfcd05de99089 582 PANTHER PTHR34384 1 582 0.0 T 22-04-2016 YPO0992 3517b7d754f922ba5b2dfcd05de99089 582 Pfam PF04183 IucA / IucC family 132 374 4.0E-68 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 YPO2754 f32c869cfa4b0cc99d6822c955b7b40d 180 Pfam PF04315 Elongation factor P hydroxylase 11 169 7.8E-78 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- YPO0271 618f9ff72138d3366b3d2d895f17c5da 97 Pfam PF01313 Bacterial export proteins, family 3 14 86 4.5E-26 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0271 618f9ff72138d3366b3d2d895f17c5da 97 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 62 84 4.0E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0271 618f9ff72138d3366b3d2d895f17c5da 97 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 47 62 4.0E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0271 618f9ff72138d3366b3d2d895f17c5da 97 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 26 47 4.0E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0271 618f9ff72138d3366b3d2d895f17c5da 97 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 14 92 6.3E-31 T 22-04-2016 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 YPO0271 618f9ff72138d3366b3d2d895f17c5da 97 PIRSF PIRSF004669 9 96 3.3E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO0271 618f9ff72138d3366b3d2d895f17c5da 97 PANTHER PTHR34040 10 97 2.6E-47 T 22-04-2016 YPO0271 618f9ff72138d3366b3d2d895f17c5da 97 PANTHER PTHR34040:SF1 10 97 2.6E-47 T 22-04-2016 YPO0714 fb64a180825d21bb5640b68932004013 546 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 16 538 2.7E-59 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO0714 fb64a180825d21bb5640b68932004013 546 PANTHER PTHR30046:SF0 13 540 7.1E-106 T 22-04-2016 YPO0714 fb64a180825d21bb5640b68932004013 546 PANTHER PTHR30046 13 540 7.1E-106 T 22-04-2016 YPO0714 fb64a180825d21bb5640b68932004013 546 Pfam PF08345 Flagellar M-ring protein C-terminal 252 403 2.6E-35 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal YPO0714 fb64a180825d21bb5640b68932004013 546 Pfam PF01514 Secretory protein of YscJ/FliF family 26 218 5.0E-58 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF YPO0714 fb64a180825d21bb5640b68932004013 546 PIRSF PIRSF004862 1 540 1.0E-107 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO0714 fb64a180825d21bb5640b68932004013 546 PRINTS PR01009 Flagellar M-ring protein signature 117 135 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO0714 fb64a180825d21bb5640b68932004013 546 PRINTS PR01009 Flagellar M-ring protein signature 149 163 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO0714 fb64a180825d21bb5640b68932004013 546 PRINTS PR01009 Flagellar M-ring protein signature 334 358 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO0714 fb64a180825d21bb5640b68932004013 546 PRINTS PR01009 Flagellar M-ring protein signature 193 211 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO0714 fb64a180825d21bb5640b68932004013 546 PRINTS PR01009 Flagellar M-ring protein signature 265 283 2.4E-25 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YPO3827 ab6eeea0e1971aa4817a823fc5ae39ae 371 PANTHER PTHR23344:SF7 12 371 2.9E-121 T 22-04-2016 YPO3827 ab6eeea0e1971aa4817a823fc5ae39ae 371 SUPERFAMILY SSF51695 40 364 7.59E-91 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO3827 ab6eeea0e1971aa4817a823fc5ae39ae 371 PANTHER PTHR23344 12 371 2.9E-121 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPO3827 ab6eeea0e1971aa4817a823fc5ae39ae 371 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 44 358 4.2E-71 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPO3827 ab6eeea0e1971aa4817a823fc5ae39ae 371 Gene3D G3DSA:3.20.20.190 40 365 3.7E-91 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO0293 dd8c8ac74dd349732831d7b5b8d9d81c 353 Pfam PF15632 ATP-grasp in the biosynthetic pathway with Ter operon 4 340 2.7E-110 T 22-04-2016 IPR011226 ATP-grasp family YPO0293 dd8c8ac74dd349732831d7b5b8d9d81c 353 Gene3D G3DSA:3.30.470.20 217 309 7.2E-12 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO0293 dd8c8ac74dd349732831d7b5b8d9d81c 353 PIRSF PIRSF029120 1 353 2.6E-175 T 22-04-2016 IPR011226 ATP-grasp family YPO0293 dd8c8ac74dd349732831d7b5b8d9d81c 353 SUPERFAMILY SSF56059 109 314 4.28E-20 T 22-04-2016 YPO1163 9593fdcd733a4a89ba9be36dc46f5b4b 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 5.9E-62 T 22-04-2016 YPO1163 9593fdcd733a4a89ba9be36dc46f5b4b 236 PANTHER PTHR23291:SF42 2 236 5.1E-103 T 22-04-2016 YPO1163 9593fdcd733a4a89ba9be36dc46f5b4b 236 PANTHER PTHR23291 2 236 5.1E-103 T 22-04-2016 IPR006214 Bax inhibitor 1-related YPO0837 aae9c5e0bdb7119ead5e604be9b04ba4 146 PANTHER PTHR33799:SF1 2 146 1.5E-61 T 22-04-2016 YPO0837 aae9c5e0bdb7119ead5e604be9b04ba4 146 PANTHER PTHR33799 2 146 1.5E-61 T 22-04-2016 YPO0837 aae9c5e0bdb7119ead5e604be9b04ba4 146 Gene3D G3DSA:3.40.50.510 1 132 9.4E-39 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPO0837 aae9c5e0bdb7119ead5e604be9b04ba4 146 SUPERFAMILY SSF53062 1 130 3.92E-35 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPO0837 aae9c5e0bdb7119ead5e604be9b04ba4 146 Pfam PF03610 PTS system fructose IIA component 3 115 4.5E-27 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YPO4115 89affb6eef1f9bf8686cfa0e48def073 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 294 1.5E-84 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 YPO4115 89affb6eef1f9bf8686cfa0e48def073 295 PANTHER PTHR30425 5 295 1.1E-137 T 22-04-2016 YPO4115 89affb6eef1f9bf8686cfa0e48def073 295 SUPERFAMILY SSF161098 31 286 7.85E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4115 89affb6eef1f9bf8686cfa0e48def073 295 PANTHER PTHR30425:SF0 5 295 1.1E-137 T 22-04-2016 YPO4115 89affb6eef1f9bf8686cfa0e48def073 295 Gene3D G3DSA:1.10.3720.10 28 294 1.1E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4115 89affb6eef1f9bf8686cfa0e48def073 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 1.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1820a 92b4e8651b29e0425f30e0652f3a0dd6 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 3.3E-33 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 YPO1820a 92b4e8651b29e0425f30e0652f3a0dd6 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 7.9E-30 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO1820a 92b4e8651b29e0425f30e0652f3a0dd6 89 PIRSF PIRSF004669 1 89 1.5E-32 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO1820a 92b4e8651b29e0425f30e0652f3a0dd6 89 PANTHER PTHR34040 1 89 1.0E-35 T 22-04-2016 YPO1820a 92b4e8651b29e0425f30e0652f3a0dd6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.5E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO1820a 92b4e8651b29e0425f30e0652f3a0dd6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.5E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO1820a 92b4e8651b29e0425f30e0652f3a0dd6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.5E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YPO1820a 92b4e8651b29e0425f30e0652f3a0dd6 89 PANTHER PTHR34040:SF2 1 89 1.0E-35 T 22-04-2016 YPO3905 8dea072c2c76b963285744c559e087f8 330 PANTHER PTHR32196 1 330 1.4E-231 T 22-04-2016 YPO3905 8dea072c2c76b963285744c559e087f8 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 4.0E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3905 8dea072c2c76b963285744c559e087f8 330 PANTHER PTHR32196:SF23 1 330 1.4E-231 T 22-04-2016 YPO2652 6471f5a7320909583b366b4246ce6fe9 121 Pfam PF06392 Acid shock protein repeat 47 67 4.5E-6 T 22-04-2016 IPR009435 Acid shock GO:0010447|GO:0042597 YPO2652 6471f5a7320909583b366b4246ce6fe9 121 Hamap MF_00546 Acid shock protein [asr]. 1 121 18.436 T 22-04-2016 IPR023497 Acid shock protein YPO3507 c02094da221709d9151e961bfd9fac8a 220 PANTHER PTHR26402 1 218 3.7E-165 T 22-04-2016 YPO3507 c02094da221709d9151e961bfd9fac8a 220 Gene3D G3DSA:1.10.10.10 126 218 1.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3507 c02094da221709d9151e961bfd9fac8a 220 SMART SM00448 1 112 5.2E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3507 c02094da221709d9151e961bfd9fac8a 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 5.9E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO3507 c02094da221709d9151e961bfd9fac8a 220 Pfam PF00072 Response regulator receiver domain 4 113 2.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YPO3507 c02094da221709d9151e961bfd9fac8a 220 SMART SM00862 145 216 2.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YPO3507 c02094da221709d9151e961bfd9fac8a 220 Gene3D G3DSA:3.40.50.2300 1 125 6.3E-37 T 22-04-2016 YPO3507 c02094da221709d9151e961bfd9fac8a 220 PANTHER PTHR26402:SF595 1 218 3.7E-165 T 22-04-2016 YPO3507 c02094da221709d9151e961bfd9fac8a 220 SUPERFAMILY SSF52172 1 175 2.2E-39 T 22-04-2016 IPR011006 CheY-like superfamily YPO0406 3c5c37fde0e5e5aeeece468d94594923 163 Pfam PF10696 Protein of unknown function (DUF2501) 82 160 4.5E-29 T 22-04-2016 IPR019637 Protein of unknown function DUF2501 YPO1273 264872dfba8745ba53f942d3127ce1a8 602 SUPERFAMILY SSF53850 50 591 2.63E-116 T 22-04-2016 YPO1273 264872dfba8745ba53f942d3127ce1a8 602 PIRSF PIRSF002741 5 593 3.3E-147 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YPO1273 264872dfba8745ba53f942d3127ce1a8 602 PANTHER PTHR30290:SF2 1 353 1.2E-263 T 22-04-2016 YPO1273 264872dfba8745ba53f942d3127ce1a8 602 PANTHER PTHR30290:SF2 380 600 1.2E-263 T 22-04-2016 YPO1273 264872dfba8745ba53f942d3127ce1a8 602 Gene3D G3DSA:3.10.105.10 321 560 1.2E-52 T 22-04-2016 YPO1273 264872dfba8745ba53f942d3127ce1a8 602 PANTHER PTHR30290 1 353 1.2E-263 T 22-04-2016 YPO1273 264872dfba8745ba53f942d3127ce1a8 602 PANTHER PTHR30290 380 600 1.2E-263 T 22-04-2016 YPO1273 264872dfba8745ba53f942d3127ce1a8 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 502 8.5E-77 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YPO1273 264872dfba8745ba53f942d3127ce1a8 602 Gene3D G3DSA:3.40.190.10 159 320 8.2E-33 T 22-04-2016 YPO0434 963cb2982386d9c45c8128f0a2054080 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YPO0434 963cb2982386d9c45c8128f0a2054080 262 Pfam PF01026 TatD related DNase 5 256 2.1E-65 T 22-04-2016 IPR001130 TatD family GO:0016788 YPO0434 963cb2982386d9c45c8128f0a2054080 262 Gene3D G3DSA:3.20.20.140 2 257 1.8E-76 T 22-04-2016 YPO0434 963cb2982386d9c45c8128f0a2054080 262 SUPERFAMILY SSF51556 4 258 5.65E-76 T 22-04-2016 IPR032466 Metal-dependent hydrolase YPO0434 963cb2982386d9c45c8128f0a2054080 262 PANTHER PTHR10060 4 259 3.4E-88 T 22-04-2016 IPR001130 TatD family GO:0016788 YPO0434 963cb2982386d9c45c8128f0a2054080 262 PIRSF PIRSF005902 1 259 3.5E-67 T 22-04-2016 IPR001130 TatD family GO:0016788 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.2E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 SMART SM00420 6 58 1.3E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 Gene3D G3DSA:3.40.50.1360 76 222 3.7E-8 T 22-04-2016 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 SUPERFAMILY SSF100950 74 233 8.89E-26 T 22-04-2016 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 Gene3D G3DSA:1.10.10.10 5 57 2.4E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 PANTHER PTHR30363 1 255 1.4E-170 T 22-04-2016 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 SUPERFAMILY SSF46785 5 65 7.76E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.8E-49 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 PANTHER PTHR30363:SF5 1 255 1.4E-170 T 22-04-2016 YPO1938 0fb781fe57d46b8be78aabd3c85a45fb 256 SMART SM01134 73 233 5.7E-64 T 22-04-2016 YPO0513 0cfa0f9d11e853e46f8efd4be4e4addd 451 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 447 2.1E-138 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO0513 0cfa0f9d11e853e46f8efd4be4e4addd 451 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 444 7.1E-118 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YPO0513 0cfa0f9d11e853e46f8efd4be4e4addd 451 PANTHER PTHR35566 1 451 8.0E-195 T 22-04-2016 YPO0513 0cfa0f9d11e853e46f8efd4be4e4addd 451 PANTHER PTHR35566:SF1 1 451 8.0E-195 T 22-04-2016 YPO0392a 5ab8b4f8739d0b533d38b8612f1fd996 87 PANTHER PTHR33609 1 87 2.2E-32 T 22-04-2016 YPO0392a 5ab8b4f8739d0b533d38b8612f1fd996 87 Gene3D G3DSA:1.10.10.60 8 82 1.6E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0392a 5ab8b4f8739d0b533d38b8612f1fd996 87 Pfam PF01527 Transposase 2 70 3.4E-19 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YPO0392a 5ab8b4f8739d0b533d38b8612f1fd996 87 SUPERFAMILY SSF46689 1 68 2.33E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO0912 066f8c61ca88b7c6ee170bc042f943bd 109 SUPERFAMILY SSF102829 6 94 1.96E-23 T 22-04-2016 IPR007838 Cell division protein ZapA-like YPO0912 066f8c61ca88b7c6ee170bc042f943bd 109 PANTHER PTHR34981:SF1 2 109 7.9E-31 T 22-04-2016 YPO0912 066f8c61ca88b7c6ee170bc042f943bd 109 PANTHER PTHR34981 2 109 7.9E-31 T 22-04-2016 YPO0912 066f8c61ca88b7c6ee170bc042f943bd 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 32.76 T 22-04-2016 IPR023771 Cell division protein ZapA, eubacteria YPO0912 066f8c61ca88b7c6ee170bc042f943bd 109 Pfam PF05164 Cell division protein ZapA 6 90 2.0E-17 T 22-04-2016 IPR007838 Cell division protein ZapA-like YPO2434 d5ce5a01af607ab6f54f1ace5673e1e4 70 Pfam PF13619 KTSC domain 7 64 4.9E-24 T 22-04-2016 IPR025309 KTSC domain YPMT1.60c 9cecd545d17601f8424cabaea09744b6 76 SUPERFAMILY SSF52507 9 72 1.22E-19 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPMT1.60c 9cecd545d17601f8424cabaea09744b6 76 Gene3D G3DSA:3.40.50.1950 9 71 1.8E-19 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPMT1.60c 9cecd545d17601f8424cabaea09744b6 76 PANTHER PTHR14359:SF20 2 74 1.9E-25 T 22-04-2016 YPMT1.60c 9cecd545d17601f8424cabaea09744b6 76 Pfam PF02441 Flavoprotein 13 66 9.3E-13 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YPMT1.60c 9cecd545d17601f8424cabaea09744b6 76 PANTHER PTHR14359 2 74 1.9E-25 T 22-04-2016 YPO3450 60098bfea136e6d1f25b802dba9e389f 349 PANTHER PTHR30465 207 349 7.0E-252 T 22-04-2016 YPO3450 60098bfea136e6d1f25b802dba9e389f 349 PANTHER PTHR30465 2 183 7.0E-252 T 22-04-2016 YPO3450 60098bfea136e6d1f25b802dba9e389f 349 Gene3D G3DSA:1.10.3720.10 216 346 7.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3450 60098bfea136e6d1f25b802dba9e389f 349 Gene3D G3DSA:1.10.3720.10 102 177 7.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3450 60098bfea136e6d1f25b802dba9e389f 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 349 4.2E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3450 60098bfea136e6d1f25b802dba9e389f 349 PANTHER PTHR30465:SF77 207 349 7.0E-252 T 22-04-2016 YPO3450 60098bfea136e6d1f25b802dba9e389f 349 PANTHER PTHR30465:SF77 2 183 7.0E-252 T 22-04-2016 YPO3450 60098bfea136e6d1f25b802dba9e389f 349 SUPERFAMILY SSF161098 106 174 1.02E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO3450 60098bfea136e6d1f25b802dba9e389f 349 SUPERFAMILY SSF161098 213 337 1.02E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1673 a85e88ffba92571d07594be52f0c98c7 958 PIRSF PIRSF035905 1 945 0.0 T 22-04-2016 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein YPO1673 a85e88ffba92571d07594be52f0c98c7 958 PANTHER PTHR38434:SF1 1 950 4.4E-213 T 22-04-2016 YPO1673 a85e88ffba92571d07594be52f0c98c7 958 Pfam PF10101 Predicted membrane protein (DUF2339) 177 935 8.3E-139 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane YPO1673 a85e88ffba92571d07594be52f0c98c7 958 PANTHER PTHR38434 1 950 4.4E-213 T 22-04-2016 YPO3175 20ee1947b3d7ffa5d4092b75adc36825 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 14 69 4.7E-23 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPO3175 20ee1947b3d7ffa5d4092b75adc36825 84 Pfam PF02609 Exonuclease VII small subunit 15 66 2.7E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPO3175 20ee1947b3d7ffa5d4092b75adc36825 84 PIRSF PIRSF006488 2 84 4.5E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPO3175 20ee1947b3d7ffa5d4092b75adc36825 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 16.129 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPO3175 20ee1947b3d7ffa5d4092b75adc36825 84 Gene3D G3DSA:1.10.287.1040 10 82 5.1E-29 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPO3175 20ee1947b3d7ffa5d4092b75adc36825 84 PANTHER PTHR34137 2 84 7.5E-29 T 22-04-2016 YPO3175 20ee1947b3d7ffa5d4092b75adc36825 84 SUPERFAMILY SSF116842 9 75 4.71E-21 T 22-04-2016 YPO3175 20ee1947b3d7ffa5d4092b75adc36825 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 14 56 3.0E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YPO1819 dc5dd5a3ebd53ea12aad493a6b67e2c0 260 PANTHER PTHR30065 2 260 1.8E-103 T 22-04-2016 YPO1819 dc5dd5a3ebd53ea12aad493a6b67e2c0 260 PANTHER PTHR30065:SF1 2 260 1.8E-103 T 22-04-2016 YPO1819 dc5dd5a3ebd53ea12aad493a6b67e2c0 260 Pfam PF01311 Bacterial export proteins, family 1 14 246 1.1E-65 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO1819 dc5dd5a3ebd53ea12aad493a6b67e2c0 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 255 3.8E-74 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 YPO1819 dc5dd5a3ebd53ea12aad493a6b67e2c0 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 4.3E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO1819 dc5dd5a3ebd53ea12aad493a6b67e2c0 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 4.3E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO1819 dc5dd5a3ebd53ea12aad493a6b67e2c0 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 4.3E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO1819 dc5dd5a3ebd53ea12aad493a6b67e2c0 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 4.3E-29 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 Gene3D G3DSA:3.40.50.300 10 316 1.8E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 PIRSF PIRSF000545 1 316 5.1E-148 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 PANTHER PTHR10285 278 316 2.7E-174 T 22-04-2016 YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 PANTHER PTHR10285 1 262 2.7E-174 T 22-04-2016 YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 9.0E-170 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 SUPERFAMILY SSF52540 10 315 1.49E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 188.755 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 PANTHER PTHR10285:SF7 278 316 2.7E-174 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 PANTHER PTHR10285:SF7 1 262 2.7E-174 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YPO3758 1a5cbc0702113c26a2f389f0a9bd97bb 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 5.7E-16 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 YPO2759 8ab41a95b98cc1faffa085ca160887d7 176 SUPERFAMILY SSF49401 30 176 2.04E-36 T 22-04-2016 IPR008966 Adhesion domain YPO2759 8ab41a95b98cc1faffa085ca160887d7 176 Pfam PF00419 Fimbrial protein 32 175 6.6E-16 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO2759 8ab41a95b98cc1faffa085ca160887d7 176 Gene3D G3DSA:2.60.40.1090 29 176 9.8E-43 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO2759 8ab41a95b98cc1faffa085ca160887d7 176 PANTHER PTHR33420:SF7 5 176 2.6E-88 T 22-04-2016 YPO2759 8ab41a95b98cc1faffa085ca160887d7 176 PANTHER PTHR33420 5 176 2.6E-88 T 22-04-2016 YPO1250a fc3e89d50a35d64f401aad9fe93d6b72 86 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 76 1.3E-15 T 22-04-2016 IPR018755 Bacteriophage Mu, Gp48 YPO1250a fc3e89d50a35d64f401aad9fe93d6b72 86 PANTHER PTHR40610 3 86 2.5E-52 T 22-04-2016 YPO2697 2fd4e4363b9c29ec1af08f4bcc7aa8f8 248 Gene3D G3DSA:3.40.1390.30 109 215 4.5E-28 T 22-04-2016 YPO2697 2fd4e4363b9c29ec1af08f4bcc7aa8f8 248 PANTHER PTHR13799 1 244 3.7E-88 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPO2697 2fd4e4363b9c29ec1af08f4bcc7aa8f8 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 236 4.5E-57 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPO2697 2fd4e4363b9c29ec1af08f4bcc7aa8f8 248 Gene3D G3DSA:3.40.1390.30 2 108 7.9E-38 T 22-04-2016 YPO2697 2fd4e4363b9c29ec1af08f4bcc7aa8f8 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 247 2.8E-70 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPO2697 2fd4e4363b9c29ec1af08f4bcc7aa8f8 248 SUPERFAMILY SSF102705 2 247 6.67E-83 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPO1777 2b9e9010922e57c059cbed20553c9504 106 Gene3D G3DSA:1.10.10.710 20 78 1.3E-27 T 22-04-2016 IPR009813 Uncharacterised protein family YebG YPO1777 2b9e9010922e57c059cbed20553c9504 106 Pfam PF07130 YebG protein 1 74 4.7E-35 T 22-04-2016 IPR009813 Uncharacterised protein family YebG YPO1325 aafa8f2eca90811cc339f20904de3cab 271 Pfam PF01569 PAP2 superfamily 136 259 4.2E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1325 aafa8f2eca90811cc339f20904de3cab 271 SUPERFAMILY SSF48317 47 260 5.23E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1325 aafa8f2eca90811cc339f20904de3cab 271 Gene3D G3DSA:1.20.144.10 111 240 2.3E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1785 d9e179be035d32ee4faf25b65098da5f 294 PANTHER PTHR34820:SF2 1 294 8.9E-91 T 22-04-2016 YPO1785 d9e179be035d32ee4faf25b65098da5f 294 PANTHER PTHR34820 1 294 8.9E-91 T 22-04-2016 YPO1785 d9e179be035d32ee4faf25b65098da5f 294 Pfam PF05425 Copper resistance protein D 189 287 1.7E-19 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 YPO1121 ae7e45946dbc6ca4f186dcc7e90f104b 228 PANTHER PTHR30625:SF3 2 227 5.1E-80 T 22-04-2016 YPO1121 ae7e45946dbc6ca4f186dcc7e90f104b 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 5.6E-42 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YPO1121 ae7e45946dbc6ca4f186dcc7e90f104b 228 PANTHER PTHR30625 2 227 5.1E-80 T 22-04-2016 YPO1121 ae7e45946dbc6ca4f186dcc7e90f104b 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 6.2E-94 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 YPO3460 70479a91ceed14c4c2e2ce9fea86bc3c 293 PIRSF PIRSF011468 1 288 2.5E-164 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 YPO3460 70479a91ceed14c4c2e2ce9fea86bc3c 293 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 2.1E-145 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 YPO2418 eac49ddf601f6bb057eef2148b2f5434 554 PANTHER PTHR33908:SF3 9 544 2.5E-177 T 22-04-2016 YPO2418 eac49ddf601f6bb057eef2148b2f5434 554 PANTHER PTHR33908 9 544 2.5E-177 T 22-04-2016 YPO2418 eac49ddf601f6bb057eef2148b2f5434 554 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 11 239 3.8E-38 T 22-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 YPO2418 eac49ddf601f6bb057eef2148b2f5434 554 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 3 553 43.835 T 22-04-2016 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 UniPathway: UPA00037 YPO1241 568c095c349f1cd8ee0f5c744167b43c 64 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 1 42 1.0E-18 T 22-04-2016 IPR024400 Protein of unknown function DUF2635 YPO1241 568c095c349f1cd8ee0f5c744167b43c 64 Pfam PF10948 Protein of unknown function (DUF2635) 3 47 1.6E-22 T 22-04-2016 IPR024400 Protein of unknown function DUF2635 YPO3963 94c95df70ff360754f356b9434e8792c 330 PANTHER PTHR32196:SF21 17 326 5.1E-114 T 22-04-2016 YPO3963 94c95df70ff360754f356b9434e8792c 330 PANTHER PTHR32196 17 326 5.1E-114 T 22-04-2016 YPO3963 94c95df70ff360754f356b9434e8792c 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 6.6E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3903 b6f5aae124cdecea55536015df89bb56 112 Pfam PF04219 Protein of unknown function, DUF 10 98 1.4E-39 T 22-04-2016 IPR007335 Protein of unknown function DUF413 YPO2748 a7a2a993065e46ee459ad42a9bc80ec8 163 Gene3D G3DSA:3.40.50.1240 1 156 1.1E-41 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO2748 a7a2a993065e46ee459ad42a9bc80ec8 163 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 4.0E-49 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YPO2748 a7a2a993065e46ee459ad42a9bc80ec8 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 73 1.6E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPO2748 a7a2a993065e46ee459ad42a9bc80ec8 163 SMART SM00855 2 115 0.0046 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YPO2748 a7a2a993065e46ee459ad42a9bc80ec8 163 SUPERFAMILY SSF53254 1 141 3.43E-19 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YPO2748 a7a2a993065e46ee459ad42a9bc80ec8 163 PANTHER PTHR23029 1 87 2.7E-21 T 22-04-2016 YPO2748 a7a2a993065e46ee459ad42a9bc80ec8 163 PANTHER PTHR23029:SF49 1 87 2.7E-21 T 22-04-2016 YPO4031 14b6a8f952b49a6ce6f0dfd6e899cb4a 81 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 1.9E-19 T 22-04-2016 IPR007684 Zinc finger, Ogr/Delta-type YPO0149 1bad9af8b502889263465c6d8345d5a9 122 Pfam PF10748 Protein of unknown function (DUF2531) 29 101 3.7E-6 T 22-04-2016 IPR019684 Protein of unknown function DUF2531 YPO1792 2ca8f60b45e62b8ba9742339ce2044ca 140 Pfam PF06366 Flagellar protein FlhE 35 140 1.7E-36 T 22-04-2016 IPR009420 Flagellar protein FlhE YPO2313 108a0c77a0c84d164c2aba99aadf99af 118 SUPERFAMILY SSF81298 2 108 3.53E-37 T 22-04-2016 YPO2499 63ed43e22b727223831b8f18a32585b9 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 321 8.2E-52 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO2499 63ed43e22b727223831b8f18a32585b9 330 PANTHER PTHR32196 1 330 9.1E-124 T 22-04-2016 YPO2499 63ed43e22b727223831b8f18a32585b9 330 PANTHER PTHR32196:SF21 1 330 9.1E-124 T 22-04-2016 YPO3031 e6301cecabd54f763475bc38ad36d8db 141 SUPERFAMILY SSF55729 1 130 8.1E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3031 e6301cecabd54f763475bc38ad36d8db 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 56.391 T 22-04-2016 IPR023072 Acetyltransferase, YpeA GO:0016747 YPO3031 e6301cecabd54f763475bc38ad36d8db 141 PANTHER PTHR23091:SF274 1 129 2.1E-25 T 22-04-2016 YPO3031 e6301cecabd54f763475bc38ad36d8db 141 Gene3D G3DSA:3.40.630.30 1 121 1.5E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO3031 e6301cecabd54f763475bc38ad36d8db 141 Pfam PF00583 Acetyltransferase (GNAT) family 48 124 4.5E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3031 e6301cecabd54f763475bc38ad36d8db 141 PANTHER PTHR23091 1 129 2.1E-25 T 22-04-2016 YPO3837 89d3aea2faf63f3ace63ceff76ad1b27 316 Gene3D G3DSA:1.20.58.340 240 316 1.8E-28 T 22-04-2016 YPO3837 89d3aea2faf63f3ace63ceff76ad1b27 316 Pfam PF01544 CorA-like Mg2+ transporter protein 25 312 1.3E-53 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 YPO3837 89d3aea2faf63f3ace63ceff76ad1b27 316 SUPERFAMILY SSF144083 251 314 1.31E-20 T 22-04-2016 YPO3837 89d3aea2faf63f3ace63ceff76ad1b27 316 PANTHER PTHR21535 7 316 9.4E-166 T 22-04-2016 YPO3837 89d3aea2faf63f3ace63ceff76ad1b27 316 SUPERFAMILY SSF143865 1 255 7.85E-37 T 22-04-2016 YPO3837 89d3aea2faf63f3ace63ceff76ad1b27 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 4 316 1.2E-106 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 YPO3837 89d3aea2faf63f3ace63ceff76ad1b27 316 PANTHER PTHR21535:SF37 7 316 9.4E-166 T 22-04-2016 YPO3741 15dc8c350ec438a37bae5ce4f185ef11 265 Pfam PF00899 ThiF family 15 258 1.1E-61 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPO3741 15dc8c350ec438a37bae5ce4f185ef11 265 SUPERFAMILY SSF69572 5 263 2.62E-79 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YPO3741 15dc8c350ec438a37bae5ce4f185ef11 265 PANTHER PTHR10953 1 262 2.1E-149 T 22-04-2016 YPO3741 15dc8c350ec438a37bae5ce4f185ef11 265 PANTHER PTHR10953:SF158 1 262 2.1E-149 T 22-04-2016 YPO3741 15dc8c350ec438a37bae5ce4f185ef11 265 Gene3D G3DSA:3.40.50.720 7 262 2.2E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO1693 663f1ef6d044793a039eac39b1f3afb2 129 PANTHER PTHR39203 1 129 1.1E-50 T 22-04-2016 YPO1693 663f1ef6d044793a039eac39b1f3afb2 129 Gene3D G3DSA:3.10.400.10 2 128 5.7E-48 T 22-04-2016 YPO1693 663f1ef6d044793a039eac39b1f3afb2 129 PIRSF PIRSF021320 1 129 2.8E-41 T 22-04-2016 IPR009326 Protein of unknown function DUF984 YPO1693 663f1ef6d044793a039eac39b1f3afb2 129 Pfam PF04266 ASCH domain 23 126 3.5E-22 T 22-04-2016 IPR007374 ASCH domain YPO1693 663f1ef6d044793a039eac39b1f3afb2 129 SMART SM01022 14 127 7.9E-38 T 22-04-2016 IPR007374 ASCH domain YPO1693 663f1ef6d044793a039eac39b1f3afb2 129 SUPERFAMILY SSF88697 3 127 2.73E-43 T 22-04-2016 IPR015947 PUA-like domain YPO1650 6eddd314ad9345ac8db952220cb49a1e 300 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 26 299 8.5E-113 T 22-04-2016 IPR021266 Kdo hydroxylase YPO2306 c6dc960b8606619e2a74ada8d5abbf34 463 PANTHER PTHR11785 1 462 7.6E-233 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO2306 c6dc960b8606619e2a74ada8d5abbf34 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 462 4.1E-169 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 YPO2306 c6dc960b8606619e2a74ada8d5abbf34 463 PIRSF PIRSF006060 1 461 3.0E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO2306 c6dc960b8606619e2a74ada8d5abbf34 463 Pfam PF13520 Amino acid permease 5 417 3.9E-74 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO2306 c6dc960b8606619e2a74ada8d5abbf34 463 PANTHER PTHR11785:SF77 1 462 7.6E-233 T 22-04-2016 YPO3459 0487552cc358da8ceedc81ef5e8a5e37 392 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 351 2.1E-155 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 YPO3459 0487552cc358da8ceedc81ef5e8a5e37 392 PIRSF PIRSF007313 1 360 1.6E-162 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 YPO0665 4d02a3d3b4b4bbdbef1812f1fe0b0b59 141 PANTHER PTHR38774:SF1 1 140 1.3E-61 T 22-04-2016 YPO0665 4d02a3d3b4b4bbdbef1812f1fe0b0b59 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 2.0E-41 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 YPO0665 4d02a3d3b4b4bbdbef1812f1fe0b0b59 141 PANTHER PTHR38774 1 140 1.3E-61 T 22-04-2016 YPO3051 20c8aba404b21411c0eaab19685a8f19 166 SUPERFAMILY SSF48452 17 132 1.9E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3051 20c8aba404b21411c0eaab19685a8f19 166 Gene3D G3DSA:1.25.40.10 15 158 6.2E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO3051 20c8aba404b21411c0eaab19685a8f19 166 Pfam PF12688 Tetratrico peptide repeat 44 162 8.8E-11 T 22-04-2016 YPO2082 945dc0dc66cae458d1a4d758598de209 218 Gene3D G3DSA:3.90.850.10 13 216 6.7E-74 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO2082 945dc0dc66cae458d1a4d758598de209 218 PANTHER PTHR11820 16 210 6.4E-82 T 22-04-2016 YPO2082 945dc0dc66cae458d1a4d758598de209 218 SUPERFAMILY SSF56529 11 212 3.92E-67 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO2082 945dc0dc66cae458d1a4d758598de209 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 207 1.5E-52 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YPO3638 e2c171b5e7c81246b05cb9d523a75a09 201 Pfam PF01380 SIS domain 40 169 5.0E-20 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YPO3638 e2c171b5e7c81246b05cb9d523a75a09 201 PANTHER PTHR38418 6 200 8.1E-18 T 22-04-2016 YPO3638 e2c171b5e7c81246b05cb9d523a75a09 201 Gene3D G3DSA:3.40.50.10490 18 191 6.4E-34 T 22-04-2016 YPO3638 e2c171b5e7c81246b05cb9d523a75a09 201 SUPERFAMILY SSF53697 17 190 1.32E-34 T 22-04-2016 YPO3223 3c0672d89d34f0e33c3b0e33497fb81c 133 Pfam PF07417 Transcriptional regulator Crl 5 122 3.1E-54 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 YPO3223 3c0672d89d34f0e33c3b0e33497fb81c 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 32.56 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 YPO1717 fc8fe09d46023afbbc71d832b2fedfbd 182 PIRSF PIRSF030780 1 182 1.8E-106 T 22-04-2016 IPR016956 Inner membrane protein YdjM YPO1717 fc8fe09d46023afbbc71d832b2fedfbd 182 PANTHER PTHR35531:SF1 1 182 2.4E-67 T 22-04-2016 YPO1717 fc8fe09d46023afbbc71d832b2fedfbd 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 163 9.7E-36 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPO1717 fc8fe09d46023afbbc71d832b2fedfbd 182 PANTHER PTHR35531 1 182 2.4E-67 T 22-04-2016 YPO3194 384323a82ef4ea13f5ec605410948793 200 PANTHER PTHR10681 1 194 3.2E-84 T 22-04-2016 YPO3194 384323a82ef4ea13f5ec605410948793 200 SUPERFAMILY SSF52833 1 194 3.69E-65 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3194 384323a82ef4ea13f5ec605410948793 200 Gene3D G3DSA:3.40.30.10 4 159 1.1E-56 T 22-04-2016 IPR012336 Thioredoxin-like fold YPO3194 384323a82ef4ea13f5ec605410948793 200 PIRSF PIRSF000239 1 199 6.1E-58 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 YPO3194 384323a82ef4ea13f5ec605410948793 200 Pfam PF00578 AhpC/TSA family 5 139 1.8E-35 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 YPO3194 384323a82ef4ea13f5ec605410948793 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 6.3E-11 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YPO3194 384323a82ef4ea13f5ec605410948793 200 Gene3D G3DSA:3.30.1020.10 160 193 2.5E-12 T 22-04-2016 YPO3002 72d727b4639428e294474d724d5e85e0 486 PANTHER PTHR11819:SF160 1 486 0.0 T 22-04-2016 YPO3002 72d727b4639428e294474d724d5e85e0 486 PANTHER PTHR11819 1 486 0.0 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO3840 666920baa373b571102b75c3907a5ae5 228 Gene3D G3DSA:1.10.357.10 18 176 9.3E-17 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPO3840 666920baa373b571102b75c3907a5ae5 228 SUPERFAMILY SSF46689 19 80 4.61E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YPO3840 666920baa373b571102b75c3907a5ae5 228 PANTHER PTHR30055:SF40 11 215 2.3E-78 T 22-04-2016 YPO3840 666920baa373b571102b75c3907a5ae5 228 PANTHER PTHR30055 11 215 2.3E-78 T 22-04-2016 YPO3840 666920baa373b571102b75c3907a5ae5 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 69 3.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YPO0663 1851068d1f89a867194e7c29120d99e7 465 Pfam PF02321 Outer membrane efflux protein 233 424 7.9E-34 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPO0663 1851068d1f89a867194e7c29120d99e7 465 Pfam PF02321 Outer membrane efflux protein 25 210 2.9E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YPO0663 1851068d1f89a867194e7c29120d99e7 465 SUPERFAMILY SSF56954 25 441 2.88E-93 T 22-04-2016 YPO0663 1851068d1f89a867194e7c29120d99e7 465 PANTHER PTHR30026 1 450 8.4E-172 T 22-04-2016 YPO0663 1851068d1f89a867194e7c29120d99e7 465 PANTHER PTHR30026:SF3 1 450 8.4E-172 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 YPO0663 1851068d1f89a867194e7c29120d99e7 465 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 440 1.1E-129 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 YPO0663 1851068d1f89a867194e7c29120d99e7 465 Gene3D G3DSA:1.20.1600.10 11 431 3.1E-90 T 22-04-2016 YPO0897 d49ca5fb44c56e7bd6256343949746e1 88 PANTHER PTHR39585:SF1 1 88 1.3E-40 T 22-04-2016 YPO0897 d49ca5fb44c56e7bd6256343949746e1 88 Gene3D G3DSA:1.10.150.250 3 85 2.5E-32 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase YPO0897 d49ca5fb44c56e7bd6256343949746e1 88 PANTHER PTHR39585 1 88 1.3E-40 T 22-04-2016 YPO0897 d49ca5fb44c56e7bd6256343949746e1 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 6.6E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase YPO0897 d49ca5fb44c56e7bd6256343949746e1 88 SUPERFAMILY SSF109910 2 78 1.2E-27 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase YPO1804 43e257bb9bdbe60253bbf26ac64651f6 232 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 1 231 1.7E-102 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 YPO1804 43e257bb9bdbe60253bbf26ac64651f6 232 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 118 215 1.8E-29 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO1804 43e257bb9bdbe60253bbf26ac64651f6 232 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 108 2.4E-35 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO1804 43e257bb9bdbe60253bbf26ac64651f6 232 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 154 232 7.6E-27 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1804 43e257bb9bdbe60253bbf26ac64651f6 232 PANTHER PTHR30435 1 232 5.9E-115 T 22-04-2016 YPO1804 43e257bb9bdbe60253bbf26ac64651f6 232 PANTHER PTHR30435:SF19 1 232 5.9E-115 T 22-04-2016 YPO1804 43e257bb9bdbe60253bbf26ac64651f6 232 SUPERFAMILY SSF117143 65 194 5.62E-36 T 22-04-2016 YPO2350 ba832b7e4258813a7a771d75fb96373a 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 2.2E-35 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 YPO2350 ba832b7e4258813a7a771d75fb96373a 75 Pfam PF06667 Phage shock protein B 4 74 8.5E-33 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 YPO0718 7fd145a6f1582a3923834b70521a1bcf 124 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 118 6.5E-23 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YPO0718 7fd145a6f1582a3923834b70521a1bcf 124 Pfam PF02050 Flagellar FliJ protein 5 115 2.3E-8 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YPO1228 8b1a278f5016b23fa329183e66bfbccc 342 PANTHER PTHR15032:SF4 9 342 3.2E-126 T 22-04-2016 YPO1228 8b1a278f5016b23fa329183e66bfbccc 342 PANTHER PTHR15032 9 342 3.2E-126 T 22-04-2016 YPO1228 8b1a278f5016b23fa329183e66bfbccc 342 SUPERFAMILY SSF56281 85 305 2.88E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1228 8b1a278f5016b23fa329183e66bfbccc 342 Gene3D G3DSA:3.60.15.10 68 341 1.9E-82 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO1228 8b1a278f5016b23fa329183e66bfbccc 342 PIRSF PIRSF038896 2 342 1.0E-99 T 22-04-2016 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 YPO1228 8b1a278f5016b23fa329183e66bfbccc 342 Pfam PF12706 Beta-lactamase superfamily domain 103 299 7.4E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase YPO2030 ac9ace51bea95333ab157c10f119dcb7 278 PANTHER PTHR32243:SF39 2 277 9.7E-218 T 22-04-2016 YPO2030 ac9ace51bea95333ab157c10f119dcb7 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 262 1.3E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2030 ac9ace51bea95333ab157c10f119dcb7 278 Gene3D G3DSA:1.10.3720.10 18 267 6.7E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO2030 ac9ace51bea95333ab157c10f119dcb7 278 PANTHER PTHR32243 2 277 9.7E-218 T 22-04-2016 YPO2030 ac9ace51bea95333ab157c10f119dcb7 278 SUPERFAMILY SSF161098 8 270 1.83E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1732 9751792c2ef67ad730cc6715efce5009 270 SUPERFAMILY SSF55486 34 245 1.54E-44 T 22-04-2016 YPO1732 9751792c2ef67ad730cc6715efce5009 270 Pfam PF06167 Glucose-regulated metallo-peptidase M90 12 243 1.5E-63 T 22-04-2016 IPR010384 MtfA family YPO1732 9751792c2ef67ad730cc6715efce5009 270 Gene3D G3DSA:3.40.390.10 27 244 3.7E-27 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YPO1732 9751792c2ef67ad730cc6715efce5009 270 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 68.235 T 22-04-2016 IPR010384 MtfA family YPO1732 9751792c2ef67ad730cc6715efce5009 270 PANTHER PTHR30164 1 270 1.0E-118 T 22-04-2016 YPO3707 7ac72b11336ce431be1d8b2108e18c5f 165 PANTHER PTHR35850:SF2 1 165 8.5E-97 T 22-04-2016 YPO3707 7ac72b11336ce431be1d8b2108e18c5f 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 160 1.1E-54 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO3707 7ac72b11336ce431be1d8b2108e18c5f 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 2.8E-54 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO3707 7ac72b11336ce431be1d8b2108e18c5f 165 PIRSF PIRSF028301 1 165 9.1E-61 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO3707 7ac72b11336ce431be1d8b2108e18c5f 165 PANTHER PTHR35850 1 165 8.5E-97 T 22-04-2016 YPO0894 ccb354cdbdab3bdf3ac35a1b65ba8202 492 Pfam PF06123 Inner membrane protein CreD 13 435 7.1E-150 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD YPO0894 ccb354cdbdab3bdf3ac35a1b65ba8202 492 PANTHER PTHR30092 1 449 3.4E-201 T 22-04-2016 YPO0894 ccb354cdbdab3bdf3ac35a1b65ba8202 492 PIRSF PIRSF004548 1 466 1.8E-196 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD YPO2937 21cb8aca0e0885cc009500b2a0f7967b 161 PANTHER PTHR36152:SF1 1 161 9.5E-92 T 22-04-2016 YPO2937 21cb8aca0e0885cc009500b2a0f7967b 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 145 2.8E-20 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2937 21cb8aca0e0885cc009500b2a0f7967b 161 SUPERFAMILY SSF141452 2 159 9.02E-52 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2937 21cb8aca0e0885cc009500b2a0f7967b 161 Gene3D G3DSA:2.30.110.20 1 159 1.9E-62 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2937 21cb8aca0e0885cc009500b2a0f7967b 161 PANTHER PTHR36152 1 161 9.5E-92 T 22-04-2016 YPO2937 21cb8aca0e0885cc009500b2a0f7967b 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 1.6E-40 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YPO2761 130d9fcfe2bfdce69643dcf5e17f3941 305 SUPERFAMILY SSF103481 186 283 1.01E-15 T 22-04-2016 YPO2761 130d9fcfe2bfdce69643dcf5e17f3941 305 SUPERFAMILY SSF103481 42 138 5.89E-10 T 22-04-2016 YPO2761 130d9fcfe2bfdce69643dcf5e17f3941 305 Pfam PF00892 EamA-like transporter family 4 135 3.3E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO2761 130d9fcfe2bfdce69643dcf5e17f3941 305 Pfam PF00892 EamA-like transporter family 150 280 2.7E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO2761 130d9fcfe2bfdce69643dcf5e17f3941 305 PANTHER PTHR12715:SF12 3 305 5.5E-108 T 22-04-2016 YPO2761 130d9fcfe2bfdce69643dcf5e17f3941 305 PANTHER PTHR12715 3 305 5.5E-108 T 22-04-2016 YPO0568 fe61e57ca43f80704b575b3c5da9bb89 122 PANTHER PTHR33452 1 122 5.8E-85 T 22-04-2016 YPO0568 fe61e57ca43f80704b575b3c5da9bb89 122 PANTHER PTHR33452:SF8 1 122 5.8E-85 T 22-04-2016 YPO0568 fe61e57ca43f80704b575b3c5da9bb89 122 Pfam PF07681 DoxX 1 79 8.0E-16 T 22-04-2016 IPR032808 DoxX family YPO3003 7c2c3685c6f5d243ab0ccb01dc83d91d 65 PANTHER PTHR40034:SF1 1 65 1.3E-20 T 22-04-2016 YPO3003 7c2c3685c6f5d243ab0ccb01dc83d91d 65 Pfam PF11755 Protein of unknown function (DUF3311) 7 64 2.5E-17 T 22-04-2016 IPR021741 Protein of unknown function DUF3311 YPO3003 7c2c3685c6f5d243ab0ccb01dc83d91d 65 PANTHER PTHR40034 1 65 1.3E-20 T 22-04-2016 YPO3765 e2dd652845e97a9dab4e43f1d704de13 443 Gene3D G3DSA:3.90.230.10 161 439 1.1E-48 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO3765 e2dd652845e97a9dab4e43f1d704de13 443 PANTHER PTHR10804 1 440 2.2E-270 T 22-04-2016 YPO3765 e2dd652845e97a9dab4e43f1d704de13 443 SUPERFAMILY SSF55920 163 438 9.81E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO3765 e2dd652845e97a9dab4e43f1d704de13 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.618 T 22-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 YPO3765 e2dd652845e97a9dab4e43f1d704de13 443 PANTHER PTHR10804:SF101 1 440 2.2E-270 T 22-04-2016 YPO3765 e2dd652845e97a9dab4e43f1d704de13 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPO3765 e2dd652845e97a9dab4e43f1d704de13 443 Pfam PF00557 Metallopeptidase family M24 168 430 5.6E-41 T 22-04-2016 IPR000994 Peptidase M24, structural domain YPO3797 846f47e304178f3c6bc8a58cf962c506 163 Pfam PF04449 CS1 type fimbrial major subunit 25 160 1.9E-34 T 22-04-2016 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 YPO0258 d3dc154b8872c93270bb8a00d57c438a 404 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 5 402 3.0E-120 T 22-04-2016 IPR012843 Type III secretion system YscD/HrpQ YPO0258 d3dc154b8872c93270bb8a00d57c438a 404 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 397 9.7E-17 T 22-04-2016 IPR032034 Yop protein translocation protein D, periplasmic domain YPO1983 f48c034b63cd13cc14d4ea51e3d478c3 384 Gene3D G3DSA:3.90.550.10 113 260 9.0E-5 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1983 f48c034b63cd13cc14d4ea51e3d478c3 384 PANTHER PTHR12726 1 384 1.1E-69 T 22-04-2016 YPO1983 f48c034b63cd13cc14d4ea51e3d478c3 384 Pfam PF13506 Glycosyl transferase family 21 97 265 1.2E-39 T 22-04-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|UniPathway: UPA00222 YPO1983 f48c034b63cd13cc14d4ea51e3d478c3 384 SUPERFAMILY SSF53448 68 288 9.11E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO2912 2aa3697cf11ea100909d45c09668a297 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 241 8.5E-25 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO2912 2aa3697cf11ea100909d45c09668a297 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 22-04-2016 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 YPO2912 2aa3697cf11ea100909d45c09668a297 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 265 511 4.7E-59 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 YPO2912 2aa3697cf11ea100909d45c09668a297 540 Gene3D G3DSA:3.60.110.10 4 242 1.8E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO2912 2aa3697cf11ea100909d45c09668a297 540 SUPERFAMILY SSF52402 251 520 1.01E-77 T 22-04-2016 YPO2912 2aa3697cf11ea100909d45c09668a297 540 SUPERFAMILY SSF56317 4 242 1.44E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO2912 2aa3697cf11ea100909d45c09668a297 540 PANTHER PTHR23090 2 535 4.3E-202 T 22-04-2016 YPO2912 2aa3697cf11ea100909d45c09668a297 540 Pfam PF02540 NAD synthase 264 511 1.5E-71 T 22-04-2016 IPR022310 NAD/GMP synthase YPO2912 2aa3697cf11ea100909d45c09668a297 540 Gene3D G3DSA:3.40.50.620 258 518 2.3E-76 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3401 82cae30b2b77543640202152d264cfec 266 Pfam PF02548 Ketopantoate hydroxymethyltransferase 5 260 4.8E-106 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPO3401 82cae30b2b77543640202152d264cfec 266 PANTHER PTHR20881 1 266 3.2E-195 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPO3401 82cae30b2b77543640202152d264cfec 266 SUPERFAMILY SSF51621 5 265 4.22E-105 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO3401 82cae30b2b77543640202152d264cfec 266 PANTHER PTHR20881:SF3 1 266 3.2E-195 T 22-04-2016 YPO3401 82cae30b2b77543640202152d264cfec 266 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 5 265 42.161 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPO3401 82cae30b2b77543640202152d264cfec 266 PIRSF PIRSF000388 1 266 2.0E-99 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPO3401 82cae30b2b77543640202152d264cfec 266 Gene3D G3DSA:3.20.20.60 2 266 4.0E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YPO3401 82cae30b2b77543640202152d264cfec 266 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 266 4.9E-118 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YPO1510 f286c5b6dcd787918034bf58bae5c456 245 Gene3D G3DSA:3.40.50.620 38 169 1.9E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1510 f286c5b6dcd787918034bf58bae5c456 245 PANTHER PTHR30336:SF0 2 242 5.4E-133 T 22-04-2016 YPO1510 f286c5b6dcd787918034bf58bae5c456 245 PIRSF PIRSF005011 1 245 5.6E-150 T 22-04-2016 IPR023604 Uncharacterised protein family SanA YPO1510 f286c5b6dcd787918034bf58bae5c456 245 PANTHER PTHR30336 2 242 5.4E-133 T 22-04-2016 YPO1510 f286c5b6dcd787918034bf58bae5c456 245 Pfam PF02698 DUF218 domain 48 170 1.5E-17 T 22-04-2016 IPR003848 Domain of unknown function DUF218 YPO2442 518286dc81da5b21af433b91689c2e51 297 SUPERFAMILY SSF81345 5 266 2.62E-45 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO2442 518286dc81da5b21af433b91689c2e51 297 Pfam PF00950 ABC 3 transport family 14 268 1.8E-98 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YPO2442 518286dc81da5b21af433b91689c2e51 297 PANTHER PTHR30477:SF9 5 297 4.8E-213 T 22-04-2016 YPO2442 518286dc81da5b21af433b91689c2e51 297 PANTHER PTHR30477 5 297 4.8E-213 T 22-04-2016 YPO2442 518286dc81da5b21af433b91689c2e51 297 Gene3D G3DSA:1.10.3470.10 57 267 8.9E-12 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YPO1722 bd7bf8930dab033b662994f9233a31d0 296 SUPERFAMILY SSF160964 4 39 6.41E-5 T 22-04-2016 YPO1722 bd7bf8930dab033b662994f9233a31d0 296 PANTHER PTHR30193:SF1 3 292 5.1E-158 T 22-04-2016 YPO1722 bd7bf8930dab033b662994f9233a31d0 296 SUPERFAMILY SSF161098 50 273 1.1E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1722 bd7bf8930dab033b662994f9233a31d0 296 PANTHER PTHR30193 3 292 5.1E-158 T 22-04-2016 YPO1722 bd7bf8930dab033b662994f9233a31d0 296 Gene3D G3DSA:1.10.3720.10 56 282 8.5E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1722 bd7bf8930dab033b662994f9233a31d0 296 Gene3D G3DSA:1.20.58.370 4 39 7.0E-5 T 22-04-2016 YPO1722 bd7bf8930dab033b662994f9233a31d0 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 275 6.8E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0751 ed6ab4a9b1df816f550219a42833df8e 123 Pfam PF05656 Protein of unknown function (DUF805) 19 121 8.2E-15 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 YPO2701 770e65b99a96b0442c8998b6fdf2dee8 243 PANTHER PTHR41293:SF1 2 243 7.2E-126 T 22-04-2016 YPO2701 770e65b99a96b0442c8998b6fdf2dee8 243 PANTHER PTHR41293 2 243 7.2E-126 T 22-04-2016 YPO2701 770e65b99a96b0442c8998b6fdf2dee8 243 Pfam PF06149 Protein of unknown function (DUF969) 7 224 3.0E-88 T 22-04-2016 IPR010374 Protein of unknown function DUF969 YPO1186 e65634d85213d45337a9c7e10aab6a82 157 PANTHER PTHR37805 1 156 9.1E-86 T 22-04-2016 YPO1186 e65634d85213d45337a9c7e10aab6a82 157 PANTHER PTHR37805:SF1 1 156 9.1E-86 T 22-04-2016 YPO1186 e65634d85213d45337a9c7e10aab6a82 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 3.1E-27 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 YPO1186 e65634d85213d45337a9c7e10aab6a82 157 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 2.6E-25 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 YPO3087 0d3137168b103d43878cea70806de169 269 PANTHER PTHR40590 1 268 4.6E-123 T 22-04-2016 YPO3087 0d3137168b103d43878cea70806de169 269 Pfam PF01963 TraB family 31 267 7.3E-40 T 22-04-2016 IPR002816 Pheromone shutdown, TraB YPO3193 bccf4dc457fecf5eff86f2c29a3ced77 193 PANTHER PTHR38764:SF1 2 193 4.9E-93 T 22-04-2016 YPO3193 bccf4dc457fecf5eff86f2c29a3ced77 193 Pfam PF04336 Protein of unknown function, DUF479 81 185 2.1E-31 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YPO3193 bccf4dc457fecf5eff86f2c29a3ced77 193 PANTHER PTHR38764 2 193 4.9E-93 T 22-04-2016 YPO3193 bccf4dc457fecf5eff86f2c29a3ced77 193 PIRSF PIRSF011489 1 193 2.6E-78 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YPO3193 bccf4dc457fecf5eff86f2c29a3ced77 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 58.179 T 22-04-2016 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YPO2684 89ee44525dc995d1e0d000c8038df0fe 122 PANTHER PTHR37549:SF1 1 122 5.9E-53 T 22-04-2016 YPO2684 89ee44525dc995d1e0d000c8038df0fe 122 PANTHER PTHR37549 1 122 5.9E-53 T 22-04-2016 YPO0938 628af073ee1e0d677594a5767701e871 294 PANTHER PTHR23088 1 288 2.4E-156 T 22-04-2016 YPO0938 628af073ee1e0d677594a5767701e871 294 SUPERFAMILY SSF56317 1 285 1.7E-81 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO0938 628af073ee1e0d677594a5767701e871 294 PANTHER PTHR23088:SF11 1 288 2.4E-156 T 22-04-2016 YPO0938 628af073ee1e0d677594a5767701e871 294 Pfam PF00795 Carbon-nitrogen hydrolase 5 268 3.3E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO0938 628af073ee1e0d677594a5767701e871 294 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 285 3.1E-146 T 22-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 YPO0938 628af073ee1e0d677594a5767701e871 294 Gene3D G3DSA:3.60.110.10 1 285 4.7E-94 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YPO0883 9e9f0f1b84e8635ff6d6d7c08f12f3a1 120 Gene3D G3DSA:1.10.260.40 63 117 1.2E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO0883 9e9f0f1b84e8635ff6d6d7c08f12f3a1 120 SMART SM00530 63 118 1.6E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO0883 9e9f0f1b84e8635ff6d6d7c08f12f3a1 120 Pfam PF01381 Helix-turn-helix 65 114 3.6E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO0883 9e9f0f1b84e8635ff6d6d7c08f12f3a1 120 SUPERFAMILY SSF47413 63 115 8.16E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO1740 aeac2f980bc0f88363b02167a077333c 91 Pfam PF13974 YebO-like protein 17 91 5.6E-29 T 22-04-2016 IPR025594 YebO-like protein YPO1122 9c836096e8015734fed22a593e746e5c 142 PANTHER PTHR30558:SF7 1 141 6.9E-72 T 22-04-2016 YPO1122 9c836096e8015734fed22a593e746e5c 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 8.1E-38 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 YPO1122 9c836096e8015734fed22a593e746e5c 142 PANTHER PTHR30558 1 141 6.9E-72 T 22-04-2016 YPO1122 9c836096e8015734fed22a593e746e5c 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 2.1E-24 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 YPO3601 79914da96ac73f21e0d8bd8505d1182f 228 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 41 228 1.4E-81 T 22-04-2016 IPR017738 Type VI secretion system-associated, VCA0118 YPO3601 79914da96ac73f21e0d8bd8505d1182f 228 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 43 228 8.0E-63 T 22-04-2016 IPR017738 Type VI secretion system-associated, VCA0118 YPO3423 b4d6a2d59942a2ee4c8c0157da5c70ed 183 Gene3D G3DSA:3.40.80.10 3 179 1.0E-65 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO3423 b4d6a2d59942a2ee4c8c0157da5c70ed 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 31 166 4.8E-19 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO3423 b4d6a2d59942a2ee4c8c0157da5c70ed 183 PANTHER PTHR30417:SF4 1 182 1.5E-95 T 22-04-2016 YPO3423 b4d6a2d59942a2ee4c8c0157da5c70ed 183 SMART SM00644 16 166 1.4E-51 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO3423 b4d6a2d59942a2ee4c8c0157da5c70ed 183 SUPERFAMILY SSF55846 2 181 4.45E-66 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YPO3423 b4d6a2d59942a2ee4c8c0157da5c70ed 183 PANTHER PTHR30417 1 182 1.5E-95 T 22-04-2016 YPO2280 e3d224b4e3db7f229f12865852d72acc 414 PANTHER PTHR30332 8 413 3.0E-77 T 22-04-2016 YPO2280 e3d224b4e3db7f229f12865852d72acc 414 Pfam PF00263 Bacterial type II and III secretion system protein 243 373 1.5E-23 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YPO1812 d13ca793866f50482c0a1e19c8b4d451 353 PANTHER PTHR32196:SF39 1 350 5.9E-197 T 22-04-2016 YPO1812 d13ca793866f50482c0a1e19c8b4d451 353 PANTHER PTHR32196 1 350 5.9E-197 T 22-04-2016 YPO1812 d13ca793866f50482c0a1e19c8b4d451 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 325 2.6E-25 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO1943 0e2b3654ef53d081586750df26dd8f2e 470 Pfam PF04945 YHS domain 409 455 2.6E-18 T 22-04-2016 IPR007029 YHS domain YPO1943 0e2b3654ef53d081586750df26dd8f2e 470 Pfam PF10080 Predicted membrane protein (DUF2318) 298 401 1.3E-28 T 22-04-2016 IPR018758 Domain of unknown function DUF2318, membrane YPO0863 58c3ffdd4f03bddc3c730ec581f6f9f3 285 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 59 151 5.8E-9 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family YPO0863 58c3ffdd4f03bddc3c730ec581f6f9f3 285 SUPERFAMILY SSF54001 58 154 5.89E-28 T 22-04-2016 YPO0863 58c3ffdd4f03bddc3c730ec581f6f9f3 285 SUPERFAMILY SSF54001 196 232 5.89E-28 T 22-04-2016 YPO0863 58c3ffdd4f03bddc3c730ec581f6f9f3 285 Gene3D G3DSA:2.30.30.330 191 232 1.6E-24 T 22-04-2016 YPO0863 58c3ffdd4f03bddc3c730ec581f6f9f3 285 Gene3D G3DSA:2.30.30.330 58 150 1.6E-24 T 22-04-2016 YPO1072 aa465b4bf5d0659069b05f7d8df2924f 217 Gene3D G3DSA:1.10.3720.10 9 214 6.2E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1072 aa465b4bf5d0659069b05f7d8df2924f 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 8.5E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1072 aa465b4bf5d0659069b05f7d8df2924f 217 PANTHER PTHR30450:SF1 1 217 1.1E-123 T 22-04-2016 YPO1072 aa465b4bf5d0659069b05f7d8df2924f 217 PANTHER PTHR30450 1 217 1.1E-123 T 22-04-2016 YPO1072 aa465b4bf5d0659069b05f7d8df2924f 217 SUPERFAMILY SSF161098 9 201 1.06E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO0503 bcab395e1dd4e9cd70c4ba8ee20d2b52 147 PANTHER PTHR38595 1 147 2.7E-83 T 22-04-2016 YPO0503 bcab395e1dd4e9cd70c4ba8ee20d2b52 147 PANTHER PTHR38595:SF1 1 147 2.7E-83 T 22-04-2016 YPO0503 bcab395e1dd4e9cd70c4ba8ee20d2b52 147 Pfam PF04965 Gene 25-like lysozyme 25 121 1.7E-12 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO2349 e715f5d9e9ca77ae5439b912fd45ffaa 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 3.9E-40 T 22-04-2016 IPR014320 Phage shock protein, PspC YPO2349 e715f5d9e9ca77ae5439b912fd45ffaa 119 Pfam PF04024 PspC domain 8 64 7.5E-18 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal YPO2349 e715f5d9e9ca77ae5439b912fd45ffaa 119 PANTHER PTHR33885 1 119 1.1E-40 T 22-04-2016 YPO2694 884f6e6c26299d299b4c21e471205f42 160 PANTHER PTHR30087 25 155 3.6E-38 T 22-04-2016 YPO2694 884f6e6c26299d299b4c21e471205f42 160 PANTHER PTHR30087:SF0 25 155 3.6E-38 T 22-04-2016 YPO2694 884f6e6c26299d299b4c21e471205f42 160 Pfam PF08349 Protein of unknown function (DUF1722) 41 157 2.3E-36 T 22-04-2016 IPR013560 Domain of unknown function DUF1722 YPO2950 6d6554771077ba8e397b4e26d1cd41bc 343 SUPERFAMILY SSF49401 207 340 6.15E-18 T 22-04-2016 IPR008966 Adhesion domain YPO2950 6d6554771077ba8e397b4e26d1cd41bc 343 Pfam PF00419 Fimbrial protein 201 342 2.1E-15 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO2950 6d6554771077ba8e397b4e26d1cd41bc 343 Gene3D G3DSA:2.60.40.1090 208 340 3.7E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YPO3970 1e22881da2d08e14898ceeebc5c3d62e 148 SUPERFAMILY SSF52402 3 139 1.17E-31 T 22-04-2016 YPO3970 1e22881da2d08e14898ceeebc5c3d62e 148 PIRSF PIRSF006276 1 141 4.8E-54 T 22-04-2016 IPR006015 Universal stress protein A YPO3970 1e22881da2d08e14898ceeebc5c3d62e 148 Gene3D G3DSA:3.40.50.620 3 139 2.6E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3970 1e22881da2d08e14898ceeebc5c3d62e 148 Pfam PF00582 Universal stress protein family 3 138 7.6E-21 T 22-04-2016 IPR006016 UspA GO:0006950 YPO0814 fdca7eaa505c021f803ceb787ae6872f 338 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 99 127 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 YPO0814 fdca7eaa505c021f803ceb787ae6872f 338 PANTHER PTHR30012 1 338 6.9E-121 T 22-04-2016 YPO0814 fdca7eaa505c021f803ceb787ae6872f 338 Pfam PF00482 Type II secretion system (T2SS), protein F 208 327 9.9E-22 T 22-04-2016 IPR018076 Type II secretion system F domain YPO0814 fdca7eaa505c021f803ceb787ae6872f 338 Pfam PF00482 Type II secretion system (T2SS), protein F 5 127 1.4E-29 T 22-04-2016 IPR018076 Type II secretion system F domain YPO0814 fdca7eaa505c021f803ceb787ae6872f 338 PANTHER PTHR30012:SF6 1 338 6.9E-121 T 22-04-2016 YPO0814 fdca7eaa505c021f803ceb787ae6872f 338 PRINTS PR00812 Bacterial general secretion pathway protein F signature 318 337 1.9E-26 T 22-04-2016 IPR003004 GspF/PilC family YPO0814 fdca7eaa505c021f803ceb787ae6872f 338 PRINTS PR00812 Bacterial general secretion pathway protein F signature 302 316 1.9E-26 T 22-04-2016 IPR003004 GspF/PilC family YPO0814 fdca7eaa505c021f803ceb787ae6872f 338 PRINTS PR00812 Bacterial general secretion pathway protein F signature 99 127 1.9E-26 T 22-04-2016 IPR003004 GspF/PilC family YPO2777 e2c71c08a045190666eaab4354f9fac7 265 SMART SM00382 38 237 1.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO2777 e2c71c08a045190666eaab4354f9fac7 265 PANTHER PTHR24220:SF347 15 265 2.4E-188 T 22-04-2016 YPO2777 e2c71c08a045190666eaab4354f9fac7 265 Pfam PF00005 ABC transporter 29 189 2.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO2777 e2c71c08a045190666eaab4354f9fac7 265 Gene3D G3DSA:3.40.50.300 14 260 6.0E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2777 e2c71c08a045190666eaab4354f9fac7 265 PANTHER PTHR24220 15 265 2.4E-188 T 22-04-2016 YPO2777 e2c71c08a045190666eaab4354f9fac7 265 PIRSF PIRSF039085 10 265 1.0E-118 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YPO2777 e2c71c08a045190666eaab4354f9fac7 265 SUPERFAMILY SSF52540 14 259 5.57E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2777 e2c71c08a045190666eaab4354f9fac7 265 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO1408 72e2c11b3421f3a80ce7600f89cb8355 182 Gene3D G3DSA:3.30.1380.10 65 182 4.8E-29 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO1408 72e2c11b3421f3a80ce7600f89cb8355 182 PANTHER PTHR37425 1 182 7.3E-80 T 22-04-2016 YPO1408 72e2c11b3421f3a80ce7600f89cb8355 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.4E-60 T 22-04-2016 IPR010275 Protein of unknown function DUF882 YPO1408 72e2c11b3421f3a80ce7600f89cb8355 182 SUPERFAMILY SSF55166 66 182 1.07E-30 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO3844 c4e330644aeedcabc03a027930ffe023 234 Pfam PF04340 Protein of unknown function, DUF484 13 231 1.8E-72 T 22-04-2016 IPR007435 Protein of unknown function DUF484 YPO3844 c4e330644aeedcabc03a027930ffe023 234 PANTHER PTHR38765 2 234 4.5E-95 T 22-04-2016 YPO3232 b9c412f4bd724962e374c4e678738685 315 PANTHER PTHR23344:SF2 19 310 7.0E-141 T 22-04-2016 YPO3232 b9c412f4bd724962e374c4e678738685 315 SUPERFAMILY SSF51695 25 307 1.99E-44 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO3232 b9c412f4bd724962e374c4e678738685 315 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 153 5.7E-16 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YPO3232 b9c412f4bd724962e374c4e678738685 315 PANTHER PTHR23344 19 310 7.0E-141 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YPO3232 b9c412f4bd724962e374c4e678738685 315 Gene3D G3DSA:3.20.20.190 6 310 7.9E-48 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YPO2867 08ba7d3ca7f02bc7ce2751dfd88afac6 132 Pfam PF06836 Protein of unknown function (DUF1240) 38 132 9.8E-39 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPO1695 043a51b1ecad45fd3d83981b5317456c 329 Pfam PF05229 Spore Coat Protein U domain 37 171 1.3E-13 T 22-04-2016 IPR007893 Spore coat protein U YPO1695 043a51b1ecad45fd3d83981b5317456c 329 Pfam PF05229 Spore Coat Protein U domain 196 325 2.2E-25 T 22-04-2016 IPR007893 Spore coat protein U YPO1695 043a51b1ecad45fd3d83981b5317456c 329 PANTHER PTHR37089:SF1 1 329 3.7E-218 T 22-04-2016 YPO1695 043a51b1ecad45fd3d83981b5317456c 329 PANTHER PTHR37089 1 329 3.7E-218 T 22-04-2016 YPO1695 043a51b1ecad45fd3d83981b5317456c 329 SMART SM00972 271 326 3.5E-12 T 22-04-2016 IPR007893 Spore coat protein U YPO1695 043a51b1ecad45fd3d83981b5317456c 329 SMART SM00972 104 172 1.1E-11 T 22-04-2016 IPR007893 Spore coat protein U YPO3659 3498d541131ac6eac554eb954bf0396c 154 PANTHER PTHR23151 1 154 6.7E-54 T 22-04-2016 YPO3659 3498d541131ac6eac554eb954bf0396c 154 Pfam PF00364 Biotin-requiring enzyme 82 153 7.3E-25 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YPO3659 3498d541131ac6eac554eb954bf0396c 154 Gene3D G3DSA:2.40.50.100 79 154 2.1E-32 T 22-04-2016 YPO3659 3498d541131ac6eac554eb954bf0396c 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 6.0E-65 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YPO3659 3498d541131ac6eac554eb954bf0396c 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 22-04-2016 IPR001882 Biotin-binding site YPO3659 3498d541131ac6eac554eb954bf0396c 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 4.3E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YPO3659 3498d541131ac6eac554eb954bf0396c 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 4.3E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YPO3659 3498d541131ac6eac554eb954bf0396c 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 4.3E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YPO3659 3498d541131ac6eac554eb954bf0396c 154 SUPERFAMILY SSF51230 79 154 8.38E-27 T 22-04-2016 IPR011053 Single hybrid motif YPO3787 c7b951aca09ac7c64909cfe9830bc0cc 267 Gene3D G3DSA:3.40.50.1820 22 255 8.3E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3787 c7b951aca09ac7c64909cfe9830bc0cc 267 SUPERFAMILY SSF53474 22 255 2.84E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO3787 c7b951aca09ac7c64909cfe9830bc0cc 267 PANTHER PTHR17630:SF42 15 255 1.1E-128 T 22-04-2016 YPO3787 c7b951aca09ac7c64909cfe9830bc0cc 267 PANTHER PTHR17630 15 255 1.1E-128 T 22-04-2016 YPO3787 c7b951aca09ac7c64909cfe9830bc0cc 267 Pfam PF01738 Dienelactone hydrolase family 32 255 4.9E-75 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 YPO2503 710e5692e794bb2ff559a7022e6fd069 222 Pfam PF16809 NleF caspase inhibitor 35 178 1.3E-55 T 22-04-2016 IPR031829 Effector protein NleF YPO2449 fa7872d021d21cf4c8025f8467c2b1d8 204 Gene3D G3DSA:1.10.10.10 142 195 8.5E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2449 fa7872d021d21cf4c8025f8467c2b1d8 204 SUPERFAMILY SSF46894 134 198 2.86E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YPO2449 fa7872d021d21cf4c8025f8467c2b1d8 204 SMART SM00421 140 197 1.1E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO2449 fa7872d021d21cf4c8025f8467c2b1d8 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 193 1.2E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YPO0076 daa2a046b81ff4fa049b4f90e8d74b16 319 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 20 317 9.9E-68 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 YPO0076 daa2a046b81ff4fa049b4f90e8d74b16 319 PANTHER PTHR34611:SF3 13 319 1.8E-208 T 22-04-2016 YPO0076 daa2a046b81ff4fa049b4f90e8d74b16 319 Pfam PF04754 Putative transposase, YhgA-like 19 220 5.7E-86 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like YPO0076 daa2a046b81ff4fa049b4f90e8d74b16 319 PANTHER PTHR34611 13 319 1.8E-208 T 22-04-2016 YPO3161 8b346dbcbdbf3ea28143d930a6911c6a 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 2.1E-54 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG YPO3161 8b346dbcbdbf3ea28143d930a6911c6a 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 3.6E-5 T 22-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site YPO0265 5d3936aec202ff6b0e41f344441cfd1e 215 Pfam PF06188 HrpE/YscL/FliH and V-type ATPase subunit E 19 188 4.5E-7 T 22-04-2016 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E YPO0265 5d3936aec202ff6b0e41f344441cfd1e 215 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 28 195 1.3E-37 T 22-04-2016 IPR012842 Type III secretion system HrpE/YscL YPO1192 7c7600da93ad00477e26b02f916f59b1 285 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 175 273 4.4E-7 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 YPO1192 7c7600da93ad00477e26b02f916f59b1 285 PIRSF PIRSF030125 7 285 5.7E-110 T 22-04-2016 IPR016946 Uncharacterised conserved protein UCP030125 YPO3260 df0e7726cd12dc5665bdfc5646977d40 67 Pfam PF13318 Protein of unknown function (DUF4089) 16 65 2.1E-17 T 22-04-2016 IPR025148 Protein of unknown function DUF4089 YPO1330 75c82b9022afd1236d35c1e9dbb02cb8 161 Pfam PF10722 Putative bacterial sensory transduction regulator 9 132 1.4E-14 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN YPO0417 d35e0b9c79b5df55e9d275d216e27c5d 410 Pfam PF04932 O-Antigen ligase 194 338 2.6E-16 T 22-04-2016 IPR007016 O-antigen ligase-related YPO0417 d35e0b9c79b5df55e9d275d216e27c5d 410 PANTHER PTHR37422 4 410 3.6E-180 T 22-04-2016 YPO0417 d35e0b9c79b5df55e9d275d216e27c5d 410 PANTHER PTHR37422:SF1 4 410 3.6E-180 T 22-04-2016 YPO2814 e6e729b52f98333010a0b90359c13a20 587 PANTHER PTHR11614 1 305 1.7E-219 T 22-04-2016 YPO2814 e6e729b52f98333010a0b90359c13a20 587 Pfam PF12146 Serine aminopeptidase, S33 32 268 6.2E-64 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 YPO2814 e6e729b52f98333010a0b90359c13a20 587 Gene3D G3DSA:3.40.50.1820 17 283 9.0E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2814 e6e729b52f98333010a0b90359c13a20 587 PANTHER PTHR11614:SF106 1 305 1.7E-219 T 22-04-2016 YPO2814 e6e729b52f98333010a0b90359c13a20 587 Pfam PF12147 Putative methyltransferase 276 583 7.3E-151 T 22-04-2016 IPR022744 Methyltransferase domain, putative YPO2814 e6e729b52f98333010a0b90359c13a20 587 SUPERFAMILY SSF53474 9 282 2.19E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO2814 e6e729b52f98333010a0b90359c13a20 587 SUPERFAMILY SSF53335 393 578 6.38E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2814 e6e729b52f98333010a0b90359c13a20 587 Gene3D G3DSA:3.40.50.150 394 568 5.4E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0465 99be1463cb551adb0dfd174d1c63237f 462 Pfam PF07690 Major Facilitator Superfamily 82 408 7.2E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YPO0465 99be1463cb551adb0dfd174d1c63237f 462 SUPERFAMILY SSF103473 19 442 5.49E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO0465 99be1463cb551adb0dfd174d1c63237f 462 PANTHER PTHR23508 1 462 0.0 T 22-04-2016 YPO0465 99be1463cb551adb0dfd174d1c63237f 462 PANTHER PTHR23508:SF5 1 462 0.0 T 22-04-2016 YPO0465 99be1463cb551adb0dfd174d1c63237f 462 Gene3D G3DSA:1.20.1250.20 38 245 8.9E-22 T 22-04-2016 YPO0465 99be1463cb551adb0dfd174d1c63237f 462 Gene3D G3DSA:1.20.1250.20 263 446 2.2E-19 T 22-04-2016 YPO3163 e66439416b87d761f7e1d31323ca966c 255 SUPERFAMILY SSF111364 26 255 1.27E-32 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 YPO3163 e66439416b87d761f7e1d31323ca966c 255 Gene3D G3DSA:2.40.230.20 21 94 3.5E-5 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 YPO3163 e66439416b87d761f7e1d31323ca966c 255 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 255 9.0E-52 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 YPO2278 0b718933684b1fea05d0c183a26a02a7 95 Pfam PF10734 Protein of unknown function (DUF2523) 9 88 1.7E-18 T 22-04-2016 IPR019670 Protein of unkown function DUF2523 YPO1578 fbd4a2b90f09b2a0464c30bd021f9900 168 PANTHER PTHR35011:SF2 2 168 5.1E-53 T 22-04-2016 YPO1578 fbd4a2b90f09b2a0464c30bd021f9900 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 153 1.8E-22 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component YPO1578 fbd4a2b90f09b2a0464c30bd021f9900 168 PANTHER PTHR35011 2 168 5.1E-53 T 22-04-2016 YPO2320 b3c2a8a961abc48fa6c59a3bad968f1f 107 Gene3D G3DSA:1.10.260.40 33 97 4.4E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2320 b3c2a8a961abc48fa6c59a3bad968f1f 107 SUPERFAMILY SSF47413 29 102 2.28E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YPO2320 b3c2a8a961abc48fa6c59a3bad968f1f 107 SMART SM00530 41 96 2.9E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO2320 b3c2a8a961abc48fa6c59a3bad968f1f 107 Pfam PF01381 Helix-turn-helix 42 93 6.0E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YPO1881 1f22ac3464eaa53777df7d2283f78fe1 119 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 43 108 2.6E-23 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 YPO1881 1f22ac3464eaa53777df7d2283f78fe1 119 Pfam PF04717 Type VI secretion system, phage-baseplate injector 43 108 2.9E-24 T 22-04-2016 IPR006531 Gp5 N-terminal YPO1539 c5a933213b11189272ebe3db38075353 296 PANTHER PTHR22572:SF118 5 293 8.4E-148 T 22-04-2016 YPO1539 c5a933213b11189272ebe3db38075353 296 SUPERFAMILY SSF53448 1 284 5.63E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1539 c5a933213b11189272ebe3db38075353 296 Gene3D G3DSA:3.90.550.10 4 276 2.9E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YPO1539 c5a933213b11189272ebe3db38075353 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 272 3.8E-114 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 YPO1539 c5a933213b11189272ebe3db38075353 296 Pfam PF00483 Nucleotidyl transferase 5 272 2.7E-24 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YPO1539 c5a933213b11189272ebe3db38075353 296 PANTHER PTHR22572 5 293 8.4E-148 T 22-04-2016 YPO2004 e5ece41c888b3461daf3950f325dc424 231 SUPERFAMILY SSF81342 16 133 2.2E-5 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YPO2004 e5ece41c888b3461daf3950f325dc424 231 Pfam PF14358 Domain of unknown function (DUF4405) 73 131 1.8E-13 T 22-04-2016 IPR025517 Domain of unknown function DUF4405 YPO3386 ab1f8dae3ccaf204036cd9bd633f66cf 204 PANTHER PTHR30506 1 204 4.5E-98 T 22-04-2016 YPO3386 ab1f8dae3ccaf204036cd9bd633f66cf 204 PANTHER PTHR30506:SF3 1 204 4.5E-98 T 22-04-2016 YPO3386 ab1f8dae3ccaf204036cd9bd633f66cf 204 Pfam PF03458 UPF0126 domain 92 161 1.2E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YPO3386 ab1f8dae3ccaf204036cd9bd633f66cf 204 Pfam PF03458 UPF0126 domain 4 78 1.3E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YPO0629 c729730cb4b9116eb163155a5ddb4d8c 100 PANTHER PTHR39169:SF1 1 100 3.0E-47 T 22-04-2016 YPO0629 c729730cb4b9116eb163155a5ddb4d8c 100 SUPERFAMILY SSF54909 3 96 1.98E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YPO0629 c729730cb4b9116eb163155a5ddb4d8c 100 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 1.0E-42 T 22-04-2016 IPR014910 Putative monooxygenase YdhR KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- YPO0629 c729730cb4b9116eb163155a5ddb4d8c 100 PANTHER PTHR39169 1 100 3.0E-47 T 22-04-2016 YPO3290 d7311382eecbf0a3acc726fb46f771de 255 Pfam PF04338 Protein of unknown function, DUF481 50 254 3.7E-56 T 22-04-2016 IPR007433 Protein of unknown function DUF481 YPO2408 2a23e27f0094943077626fe2ef86c6c9 367 Pfam PF01594 Domain of unknown function DUF20 17 346 8.2E-50 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPO2408 2a23e27f0094943077626fe2ef86c6c9 367 PANTHER PTHR21716 1 366 4.3E-177 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YPO2408 2a23e27f0094943077626fe2ef86c6c9 367 PANTHER PTHR21716:SF20 1 366 4.3E-177 T 22-04-2016 YPO3575 5f27a101a37945e59adc77b280409d37 272 PANTHER PTHR24220:SF368 13 272 2.4E-202 T 22-04-2016 YPO3575 5f27a101a37945e59adc77b280409d37 272 Gene3D G3DSA:3.40.50.300 10 242 2.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3575 5f27a101a37945e59adc77b280409d37 272 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3575 5f27a101a37945e59adc77b280409d37 272 Pfam PF00005 ABC transporter 29 175 4.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3575 5f27a101a37945e59adc77b280409d37 272 SMART SM00382 36 233 3.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3575 5f27a101a37945e59adc77b280409d37 272 PANTHER PTHR24220 13 272 2.4E-202 T 22-04-2016 YPO3575 5f27a101a37945e59adc77b280409d37 272 SUPERFAMILY SSF52540 11 240 4.44E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 SUPERFAMILY SSF116726 206 271 1.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 55.344 T 22-04-2016 IPR023018 Transport protein YidE, putative YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 Pfam PF06826 Predicted Permease Membrane Region 10 179 8.4E-47 T 22-04-2016 IPR006512 YidE/YbjL duplication YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 8.8E-46 T 22-04-2016 IPR006512 YidE/YbjL duplication YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 Gene3D G3DSA:3.30.70.1450 213 276 1.1E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 PANTHER PTHR30445:SF1 1 550 1.0E-287 T 22-04-2016 YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 Gene3D G3DSA:3.30.70.1450 290 359 4.0E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 2.9E-44 T 22-04-2016 IPR006512 YidE/YbjL duplication YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 1.3E-49 T 22-04-2016 IPR006512 YidE/YbjL duplication YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 Pfam PF02080 TrkA-C domain 211 272 8.8E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 Pfam PF02080 TrkA-C domain 293 359 1.1E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 SUPERFAMILY SSF116726 272 358 2.88E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YPO4083 48efd09aa2001e01ac4457cb2a9db95a 552 PANTHER PTHR30445 1 550 1.0E-287 T 22-04-2016 YPO1244 b280376cd13dd29660634f55a98231d7 99 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 88 1.4E-15 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative YPO1976 b4860953b2cacb2ff2cbbf8aa9eaf32e 658 PANTHER PTHR11236:SF17 366 650 8.8E-135 T 22-04-2016 YPO1976 b4860953b2cacb2ff2cbbf8aa9eaf32e 658 Pfam PF00425 chorismate binding enzyme 394 640 7.0E-42 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YPO1976 b4860953b2cacb2ff2cbbf8aa9eaf32e 658 SUPERFAMILY SSF56322 151 354 3.53E-47 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO1976 b4860953b2cacb2ff2cbbf8aa9eaf32e 658 SUPERFAMILY SSF56322 381 650 3.53E-47 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO1976 b4860953b2cacb2ff2cbbf8aa9eaf32e 658 Gene3D G3DSA:3.60.120.10 355 652 6.1E-44 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO1976 b4860953b2cacb2ff2cbbf8aa9eaf32e 658 Gene3D G3DSA:3.60.120.10 186 309 6.1E-44 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YPO1976 b4860953b2cacb2ff2cbbf8aa9eaf32e 658 PANTHER PTHR11236 366 650 8.8E-135 T 22-04-2016 YPO4020 540025bc7d27be19070c427e6b506077 309 PANTHER PTHR22911:SF73 1 307 1.3E-174 T 22-04-2016 YPO4020 540025bc7d27be19070c427e6b506077 309 Pfam PF00892 EamA-like transporter family 162 293 2.8E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO4020 540025bc7d27be19070c427e6b506077 309 PANTHER PTHR22911 1 307 1.3E-174 T 22-04-2016 YPO2122 68cbfe6ce8958998e8e514e530a9db24 250 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 247 1.5E-64 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail YPO2122 68cbfe6ce8958998e8e514e530a9db24 250 Pfam PF05100 Phage minor tail protein L 28 247 3.0E-86 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail YPO2048 68ab3ea4683d09af03cea10c78da3804 254 Pfam PF03932 CutC family 3 201 2.2E-73 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 YPO2048 68ab3ea4683d09af03cea10c78da3804 254 SUPERFAMILY SSF110395 3 244 1.96E-75 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 YPO2048 68ab3ea4683d09af03cea10c78da3804 254 PANTHER PTHR12598:SF0 1 254 9.4E-109 T 22-04-2016 YPO2048 68ab3ea4683d09af03cea10c78da3804 254 Gene3D G3DSA:3.20.20.380 1 244 1.2E-89 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 YPO2048 68ab3ea4683d09af03cea10c78da3804 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 245 38.45 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 YPO2048 68ab3ea4683d09af03cea10c78da3804 254 PANTHER PTHR12598 1 254 9.4E-109 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 YPO0691 ef3781b6f8cf77e9e07945a272ae8bab 410 Gene3D G3DSA:3.40.50.300 181 368 1.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0691 ef3781b6f8cf77e9e07945a272ae8bab 410 SUPERFAMILY SSF52540 179 365 1.72E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4100 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 30 1.0E-10 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO4100 9240acf8a3d6a0bb107ba66b40cbdf89 46 Pfam PF00468 Ribosomal protein L34 1 44 3.7E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO4100 9240acf8a3d6a0bb107ba66b40cbdf89 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.9E-26 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO4100 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO4100 9240acf8a3d6a0bb107ba66b40cbdf89 46 PANTHER PTHR14503 1 46 8.9E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO4100 9240acf8a3d6a0bb107ba66b40cbdf89 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.553 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YPO1476 88a31fe297ed48e969dc2cbc4b85f156 727 Gene3D G3DSA:2.70.70.10 30 155 1.6E-11 T 22-04-2016 YPO1476 88a31fe297ed48e969dc2cbc4b85f156 727 SUPERFAMILY SSF51261 31 157 3.03E-7 T 22-04-2016 IPR011055 Duplicated hybrid motif YPO1476 88a31fe297ed48e969dc2cbc4b85f156 727 SUPERFAMILY SSF53955 482 568 7.87E-7 T 22-04-2016 IPR023346 Lysozyme-like domain YPO1476 88a31fe297ed48e969dc2cbc4b85f156 727 Pfam PF01551 Peptidase family M23 42 155 9.0E-6 T 22-04-2016 IPR016047 Peptidase M23 YPO3061 c6be80c07ff35d366b3984cf971daf95 352 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 40.118 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC YPO3061 c6be80c07ff35d366b3984cf971daf95 352 PIRSF PIRSF026343 9 346 6.6E-114 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC YPO3061 c6be80c07ff35d366b3984cf971daf95 352 Pfam PF06804 NlpB/DapX lipoprotein 40 343 6.3E-112 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein YP02742 1ee398e8338b074a04c29f3f0badebd6 408 PANTHER PTHR30009:SF10 1 309 3.5E-182 T 22-04-2016 YP02742 1ee398e8338b074a04c29f3f0badebd6 408 SUPERFAMILY SSF48452 162 268 8.73E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YP02742 1ee398e8338b074a04c29f3f0badebd6 408 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 112 8.2E-31 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI YP02742 1ee398e8338b074a04c29f3f0badebd6 408 Pfam PF14559 Tetratricopeptide repeat 175 242 3.8E-11 T 22-04-2016 YP02742 1ee398e8338b074a04c29f3f0badebd6 408 PANTHER PTHR30009 1 309 3.5E-182 T 22-04-2016 YP02742 1ee398e8338b074a04c29f3f0badebd6 408 Gene3D G3DSA:1.25.40.10 193 284 1.1E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YPO1487 ee302c63fa0edc9c68620b572c7484bf 162 PANTHER PTHR37625:SF1 1 162 2.4E-88 T 22-04-2016 YPO1487 ee302c63fa0edc9c68620b572c7484bf 162 PANTHER PTHR37625 1 162 2.4E-88 T 22-04-2016 YPO1487 ee302c63fa0edc9c68620b572c7484bf 162 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 1 153 3.8E-40 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPO1487 ee302c63fa0edc9c68620b572c7484bf 162 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 1 143 1.3E-23 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YPO0688 d71e5b6158a96229af4994d465e0b558 277 Pfam PF00482 Type II secretion system (T2SS), protein F 135 263 5.5E-10 T 22-04-2016 IPR018076 Type II secretion system F domain YPO0688 d71e5b6158a96229af4994d465e0b558 277 PANTHER PTHR35007:SF2 1 274 8.6E-84 T 22-04-2016 YPO0688 d71e5b6158a96229af4994d465e0b558 277 PANTHER PTHR35007 1 274 8.6E-84 T 22-04-2016 YPO2039 96934f7f93e48777ddc83537f61b4092 187 Pfam PF07273 Protein of unknown function (DUF1439) 29 180 1.2E-58 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 YPO2954 614883efac4dd8f139288bdf408ed9b1 160 Gene3D G3DSA:3.40.1000.10 6 156 5.5E-35 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO2954 614883efac4dd8f139288bdf408ed9b1 160 SUPERFAMILY SSF55724 5 155 6.8E-37 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO2954 614883efac4dd8f139288bdf408ed9b1 160 Pfam PF08786 Domain of unknown function (DUF1795) 12 151 1.4E-33 T 22-04-2016 IPR014894 Protein DcrB YPO3233 dc87ff17e4cb656d9527b16afe02a46d 75 Pfam PF04400 Protein of unknown function (DUF539) 23 65 1.6E-22 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM YPO3233 dc87ff17e4cb656d9527b16afe02a46d 75 PANTHER PTHR40691 3 75 8.0E-30 T 22-04-2016 YPO0640 47d7f9b6a4984b6a8dccf9526c337498 156 Gene3D G3DSA:3.40.1580.10 46 144 3.9E-5 T 22-04-2016 IPR018958 SMI1/KNR4-like domain YPO0640 47d7f9b6a4984b6a8dccf9526c337498 156 SUPERFAMILY SSF160631 49 148 3.73E-7 T 22-04-2016 YPO1459 1d00674e3ab2b8f7340011d107b2a656 253 Gene3D G3DSA:3.90.226.10 2 230 4.7E-44 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1459 1d00674e3ab2b8f7340011d107b2a656 253 SUPERFAMILY SSF52096 10 243 4.25E-47 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YPO1459 1d00674e3ab2b8f7340011d107b2a656 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 247 1.5E-47 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YPO1459 1d00674e3ab2b8f7340011d107b2a656 253 PANTHER PTHR11941:SF67 1 251 7.2E-176 T 22-04-2016 YPO1459 1d00674e3ab2b8f7340011d107b2a656 253 PANTHER PTHR11941 1 251 7.2E-176 T 22-04-2016 YPO1459 1d00674e3ab2b8f7340011d107b2a656 253 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 YPO3297 7bd69aafb30b38fd88d5f4e68101411b 297 Pfam PF01578 Cytochrome C assembly protein 71 295 2.3E-41 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YPO3297 7bd69aafb30b38fd88d5f4e68101411b 297 PANTHER PTHR38034 36 297 1.7E-107 T 22-04-2016 YPO0264 47f1744901cbf7d24a937a8e5152d094 197 Pfam PF13327 Type III secretion system subunit 10 171 1.8E-64 T 22-04-2016 IPR025292 Type III secretion system protein YPO0396 942b47c0569e650db4cfd79e93b069f1 470 Pfam PF13558 Putative exonuclease SbcCD, C subunit 326 414 1.7E-16 T 22-04-2016 YPO0396 942b47c0569e650db4cfd79e93b069f1 470 Gene3D G3DSA:3.40.50.300 348 429 3.9E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0396 942b47c0569e650db4cfd79e93b069f1 470 Gene3D G3DSA:3.40.50.300 161 173 3.9E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1015 4a453af15485f010da579c7d4fecad4d 202 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO1015 4a453af15485f010da579c7d4fecad4d 202 PIRSF PIRSF004525 6 202 2.9E-74 T 22-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted YPO1015 4a453af15485f010da579c7d4fecad4d 202 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 39 0.0013 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YPO2351 f5f42e15e3bf86b2a221bedbae1aaf73 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 8.4E-96 T 22-04-2016 IPR014319 Phage shock protein, PspA YPO2351 f5f42e15e3bf86b2a221bedbae1aaf73 221 PANTHER PTHR31088:SF7 2 219 6.1E-132 T 22-04-2016 YPO2351 f5f42e15e3bf86b2a221bedbae1aaf73 221 Pfam PF04012 PspA/IM30 family 2 216 2.6E-46 T 22-04-2016 IPR007157 PspA/IM30 YPO2351 f5f42e15e3bf86b2a221bedbae1aaf73 221 PANTHER PTHR31088 2 219 6.1E-132 T 22-04-2016 YPO1401 1274ba978f804618d5d737b5306fe3ac 297 Pfam PF03881 Fructosamine kinase 29 273 9.2E-8 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase YPO1401 1274ba978f804618d5d737b5306fe3ac 297 SUPERFAMILY SSF56112 15 269 1.56E-16 T 22-04-2016 IPR011009 Protein kinase-like domain YPO2347 ebae9848eb5e44f37b4babba29f71369 353 Pfam PF05128 Domain of unknown function (DUF697) 183 342 3.4E-57 T 22-04-2016 IPR021147 Protein of unknown function DUF697 YPO2347 ebae9848eb5e44f37b4babba29f71369 353 PANTHER PTHR39342 1 351 3.9E-151 T 22-04-2016 YPO2347 ebae9848eb5e44f37b4babba29f71369 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 348 39.45 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 YPO2347 ebae9848eb5e44f37b4babba29f71369 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 57 342 9.5E-134 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 YPO2347 ebae9848eb5e44f37b4babba29f71369 353 PANTHER PTHR39342:SF1 1 351 3.9E-151 T 22-04-2016 YPO4055 1bcabcfceff15781d554e34b16605c43 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 307 1.7E-120 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YPO4055 1bcabcfceff15781d554e34b16605c43 309 Gene3D G3DSA:3.90.1670.10 27 308 2.5E-102 T 22-04-2016 IPR024064 FdhE-like YPO4055 1bcabcfceff15781d554e34b16605c43 309 PANTHER PTHR37689 6 309 6.9E-116 T 22-04-2016 YPO4055 1bcabcfceff15781d554e34b16605c43 309 SUPERFAMILY SSF144020 26 308 2.62E-95 T 22-04-2016 IPR024064 FdhE-like YPO4055 1bcabcfceff15781d554e34b16605c43 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 308 50.121 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YPO4055 1bcabcfceff15781d554e34b16605c43 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 306 3.1E-114 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YPO4055 1bcabcfceff15781d554e34b16605c43 309 PANTHER PTHR37689:SF1 6 309 6.9E-116 T 22-04-2016 YPO4055 1bcabcfceff15781d554e34b16605c43 309 PIRSF PIRSF018296 1 309 1.1E-135 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YPO0102 3ba4822792f1ee183c4e8db8bda7b287 194 Pfam PF14016 Protein of unknown function (DUF4232) 50 172 9.9E-13 T 22-04-2016 IPR025326 Protein of unknown function DUF4232 YPO3635 b68deb1ef8825e3a9c1009350ede4707 329 PANTHER PTHR32196 1 328 7.3E-158 T 22-04-2016 YPO3635 b68deb1ef8825e3a9c1009350ede4707 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 9.8E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3635 b68deb1ef8825e3a9c1009350ede4707 329 PANTHER PTHR32196:SF35 1 328 7.3E-158 T 22-04-2016 YPO1616 6be613777a2c2558c790c84c287d8c3e 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 50.987 T 22-04-2016 IPR022987 Uncharacterised protein family UPF0227 YPO1616 6be613777a2c2558c790c84c287d8c3e 180 PANTHER PTHR35602:SF2 1 180 4.0E-143 T 22-04-2016 YPO1616 6be613777a2c2558c790c84c287d8c3e 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.6E-71 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPO1616 6be613777a2c2558c790c84c287d8c3e 180 SUPERFAMILY SSF53474 1 176 4.39E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YPO1616 6be613777a2c2558c790c84c287d8c3e 180 PANTHER PTHR35602 1 180 4.0E-143 T 22-04-2016 YPO0981 f5417c70bc7bb2cdf9664ed1f02e4ceb 87 PANTHER PTHR33293:SF2 1 86 8.9E-16 T 22-04-2016 YPO0981 f5417c70bc7bb2cdf9664ed1f02e4ceb 87 Pfam PF12759 InsA C-terminal domain 42 86 1.1E-23 T 22-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPO0981 f5417c70bc7bb2cdf9664ed1f02e4ceb 87 PANTHER PTHR33293 1 86 8.9E-16 T 22-04-2016 YPO0981 f5417c70bc7bb2cdf9664ed1f02e4ceb 87 Pfam PF03811 InsA N-terminal domain 1 35 5.2E-17 T 22-04-2016 IPR003220 InsA N-terminal domain GO:0006313 YPO3684 38506d3759974918c4e845c06455592b 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.2E-20 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 YPO3684 38506d3759974918c4e845c06455592b 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 23.167 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 YPO0624 e47c076c099f711aa3b0ce09e3563041 483 PANTHER PTHR33451 1 473 7.7E-221 T 22-04-2016 YPO0624 e47c076c099f711aa3b0ce09e3563041 483 PANTHER PTHR33451:SF4 1 473 7.7E-221 T 22-04-2016 YPO0624 e47c076c099f711aa3b0ce09e3563041 483 Pfam PF03553 Na+/H+ antiporter family 17 188 2.7E-10 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 YPO0562 199f51d9b17450c382f8bf624eaebc4b 176 Pfam PF05258 Protein of unknown function (DUF721) 28 100 1.2E-13 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 YPO1271 839f279ac9e76dcbbce83bd0cc6cdfe8 342 Gene3D G3DSA:1.10.3720.10 136 338 1.8E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1271 839f279ac9e76dcbbce83bd0cc6cdfe8 342 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 13 50 1.2E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO1271 839f279ac9e76dcbbce83bd0cc6cdfe8 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 339 2.0E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO1271 839f279ac9e76dcbbce83bd0cc6cdfe8 342 PANTHER PTHR30325 2 342 7.6E-207 T 22-04-2016 YPO1271 839f279ac9e76dcbbce83bd0cc6cdfe8 342 SUPERFAMILY SSF161098 137 322 1.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YPO4021 d93640804bdd830d0569d1dab1f40894 414 Gene3D G3DSA:3.30.470.20 106 363 5.7E-13 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YPO4021 d93640804bdd830d0569d1dab1f40894 414 SUPERFAMILY SSF56059 107 308 1.33E-27 T 22-04-2016 YPO4021 d93640804bdd830d0569d1dab1f40894 414 Pfam PF13535 ATP-grasp domain 144 285 1.1E-13 T 22-04-2016 YPO4021 d93640804bdd830d0569d1dab1f40894 414 PANTHER PTHR23132 101 281 8.2E-15 T 22-04-2016 YPO3854 226136f33cfd7c7aa108b1d04b0b693a 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YPO3854 226136f33cfd7c7aa108b1d04b0b693a 463 PIRSF PIRSF006060 1 461 3.5E-60 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO3854 226136f33cfd7c7aa108b1d04b0b693a 463 Pfam PF00324 Amino acid permease 18 430 4.8E-101 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YPO3854 226136f33cfd7c7aa108b1d04b0b693a 463 PANTHER PTHR11785 1 462 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YPO3854 226136f33cfd7c7aa108b1d04b0b693a 463 PANTHER PTHR11785:SF28 1 462 0.0 T 22-04-2016 YPO1824 655446394ff80fa2f02100fb9f4bc8d8 156 Pfam PF03748 Flagellar basal body-associated protein FliL 54 154 2.0E-21 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 YPO1824 655446394ff80fa2f02100fb9f4bc8d8 156 PANTHER PTHR35091:SF1 1 156 7.0E-64 T 22-04-2016 YPO1824 655446394ff80fa2f02100fb9f4bc8d8 156 PANTHER PTHR35091 1 156 7.0E-64 T 22-04-2016 YPO1825 397524a12ab35cf7b866387b98321789 450 PANTHER PTHR37533:SF2 1 450 1.1E-138 T 22-04-2016 YPO1825 397524a12ab35cf7b866387b98321789 450 PRINTS PR01007 Flagellar hook-length control protein signature 305 327 1.8E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPO1825 397524a12ab35cf7b866387b98321789 450 PRINTS PR01007 Flagellar hook-length control protein signature 330 348 1.8E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPO1825 397524a12ab35cf7b866387b98321789 450 PRINTS PR01007 Flagellar hook-length control protein signature 282 304 1.8E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPO1825 397524a12ab35cf7b866387b98321789 450 PRINTS PR01007 Flagellar hook-length control protein signature 348 363 1.8E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPO1825 397524a12ab35cf7b866387b98321789 450 PRINTS PR01007 Flagellar hook-length control protein signature 74 91 1.8E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPO1825 397524a12ab35cf7b866387b98321789 450 PRINTS PR01007 Flagellar hook-length control protein signature 363 386 1.8E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YPO1825 397524a12ab35cf7b866387b98321789 450 Pfam PF02120 Flagellar hook-length control protein FliK 315 397 2.4E-20 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal YPO1825 397524a12ab35cf7b866387b98321789 450 PANTHER PTHR37533 1 450 1.1E-138 T 22-04-2016 YPO3857 d3426ed6d449328527badf9c1da76fb2 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 68.082 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 YPO3857 d3426ed6d449328527badf9c1da76fb2 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 357 7.8E-181 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 YPO1461 37b0720718cdaa32fa807c0deefd4b4d 162 Pfam PF13924 Lipocalin-like domain 27 160 1.3E-31 T 22-04-2016 IPR024311 Lipocalin-like domain YPO0259 42815b59139c45c61689ed9295d0d68c 73 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 4 70 4.7E-25 T 22-04-2016 IPR012671 Type III secretion system, secretion protein E GO:0009405 YPO0259 42815b59139c45c61689ed9295d0d68c 73 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 4 69 3.1E-24 T 22-04-2016 IPR012671 Type III secretion system, secretion protein E GO:0009405 YPO1090 f683142b355dc51b4013a2b5a8444476 319 Gene3D G3DSA:3.90.580.10 33 90 6.8E-6 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YPO1090 f683142b355dc51b4013a2b5a8444476 319 Gene3D G3DSA:3.40.1360.10 202 304 6.5E-4 T 22-04-2016 YPO1090 f683142b355dc51b4013a2b5a8444476 319 SMART SM00778 31 67 2.4E-19 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- YPO1090 f683142b355dc51b4013a2b5a8444476 319 Pfam PF13362 Toprim domain 204 301 1.9E-19 T 22-04-2016 IPR006171 Toprim domain YPO1090 f683142b355dc51b4013a2b5a8444476 319 SUPERFAMILY SSF57783 15 91 1.96E-10 T 22-04-2016 YPO1090 f683142b355dc51b4013a2b5a8444476 319 Pfam PF08273 Zinc-binding domain of primase-helicase 32 67 1.2E-18 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- YPO2864 743f4b796755b5dc19012d0d4c3e056a 131 Pfam PF06836 Protein of unknown function (DUF1240) 37 131 2.1E-37 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPO2323 53a5da3e930347aa81dd6d80e69d9368 201 PANTHER PTHR10204 1 201 1.1E-117 T 22-04-2016 YPO2323 53a5da3e930347aa81dd6d80e69d9368 201 SUPERFAMILY SSF52218 1 199 1.36E-58 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO2323 53a5da3e930347aa81dd6d80e69d9368 201 Gene3D G3DSA:3.40.50.360 1 199 4.1E-68 T 22-04-2016 IPR029039 Flavoprotein-like domain YPO2323 53a5da3e930347aa81dd6d80e69d9368 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 33.026 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 YPO2323 53a5da3e930347aa81dd6d80e69d9368 201 PANTHER PTHR10204:SF16 1 201 1.1E-117 T 22-04-2016 YPO2323 53a5da3e930347aa81dd6d80e69d9368 201 Pfam PF02525 Flavodoxin-like fold 3 195 2.5E-47 T 22-04-2016 IPR003680 Flavodoxin-like fold YPO1423a 19f0d2c0523dd0c12d1811a5cb49f90a 55 Gene3D G3DSA:1.10.10.620 1 52 2.9E-28 T 22-04-2016 IPR023200 Ribosome modulation factor-like domain YPO1423a 19f0d2c0523dd0c12d1811a5cb49f90a 55 Pfam PF04957 Ribosome modulation factor 1 52 7.9E-31 T 22-04-2016 IPR007040 Ribosome modulation factor YPO1423a 19f0d2c0523dd0c12d1811a5cb49f90a 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 2.0E-25 T 22-04-2016 IPR007040 Ribosome modulation factor YPO1423a 19f0d2c0523dd0c12d1811a5cb49f90a 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.624 T 22-04-2016 IPR007040 Ribosome modulation factor YPO3677 e2b0887e5ba25c7810335f2adef5db76 100 Pfam PF16083 LydA holin phage, holin superfamily III 15 92 1.1E-24 T 22-04-2016 IPR032126 LydA-like holin YPO1234 c92f6cd5e3fa12f16bdbd2a0f462533e 159 Pfam PF06530 Phage antitermination protein Q 20 140 8.1E-41 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 PANTHER PTHR30034:SF1 43 131 6.9E-14 T 22-04-2016 YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 59 127 1.8E-19 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 SUPERFAMILY SSF101801 56 131 2.88E-19 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 56 130 6.6E-26 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 75 91 2.0E-16 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 58 74 2.0E-16 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 104 119 2.0E-16 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 91 104 2.0E-16 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 Gene3D G3DSA:2.30.330.10 47 131 2.0E-26 T 22-04-2016 YPO0710 fd60ab7fa4a82b95b2db792517e4583d 137 PANTHER PTHR30034 43 131 6.9E-14 T 22-04-2016 YPO2611 1ebea9e2c51dafa0db5bda58d20550aa 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 2.3E-54 T 22-04-2016 IPR009912 Zinc-ribbon containing domain YPO2211 c5cdeb65a87c35762e57ec7e5dcaa097 299 PANTHER PTHR30007 16 289 4.3E-110 T 22-04-2016 YPO2211 c5cdeb65a87c35762e57ec7e5dcaa097 299 Pfam PF02811 PHP domain 18 108 3.1E-8 T 22-04-2016 IPR004013 PHP domain GO:0003824 YPO2211 c5cdeb65a87c35762e57ec7e5dcaa097 299 SMART SM00481 17 84 4.8E-20 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 YPO2211 c5cdeb65a87c35762e57ec7e5dcaa097 299 Gene3D G3DSA:3.20.20.140 171 274 1.2E-41 T 22-04-2016 YPO2211 c5cdeb65a87c35762e57ec7e5dcaa097 299 Gene3D G3DSA:3.20.20.140 17 102 1.2E-41 T 22-04-2016 YPO2211 c5cdeb65a87c35762e57ec7e5dcaa097 299 PANTHER PTHR30007:SF4 16 289 4.3E-110 T 22-04-2016 YPO2211 c5cdeb65a87c35762e57ec7e5dcaa097 299 SUPERFAMILY SSF89550 16 97 3.34E-52 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YPO2211 c5cdeb65a87c35762e57ec7e5dcaa097 299 SUPERFAMILY SSF89550 179 289 3.34E-52 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YPO1786 c48700b1528922b1d97fa13e1a8ceb01 118 Pfam PF10709 Protein of unknown function (DUF2511) 30 116 4.5E-45 T 22-04-2016 IPR019648 Protein of unknown function DUF2511 YPO3676 22a59811feaf495fccb3844e695ee12c 133 SUPERFAMILY SSF55166 3 129 8.89E-30 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO3676 22a59811feaf495fccb3844e695ee12c 133 Gene3D G3DSA:3.30.1380.10 10 90 7.1E-5 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO3676 22a59811feaf495fccb3844e695ee12c 133 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 60 127 3.2E-17 T 22-04-2016 YPO1797 d0d9e829897fb299a527342a81fd3e31 100 SUPERFAMILY SSF101498 3 92 4.97E-13 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YPO1797 d0d9e829897fb299a527342a81fd3e31 100 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 93 7.4E-19 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YPO1797 d0d9e829897fb299a527342a81fd3e31 100 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 91 3.6E-10 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YPO1008 9fe015ca031a999ef2d4a052325d2087 518 Pfam PF03806 AbgT putative transporter family 14 514 3.2E-159 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 YPO1008 9fe015ca031a999ef2d4a052325d2087 518 PANTHER PTHR30282 1 517 0.0 T 22-04-2016 YPO1008 9fe015ca031a999ef2d4a052325d2087 518 PANTHER PTHR30282:SF1 1 517 0.0 T 22-04-2016 YPO4064 334db1c51b5267746b59476e7d03ec97 150 Pfam PF10517 Electron transfer DM13 54 149 6.2E-22 T 22-04-2016 IPR019545 DM13 domain YPO2091 bdc37a5d0965e6b0b66458abf78e6b02 129 Pfam PF06530 Phage antitermination protein Q 2 124 1.7E-29 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 YPO2802 30d3c6f307a14dd085ad1f41ce6f4892 176 Pfam PF14345 GDYXXLXY protein 16 165 1.3E-34 T 22-04-2016 IPR025833 GDYXXLXY protein YPO0684 05174660794412d7a6166c32071c3ba5 518 SUPERFAMILY SSF53300 160 222 3.85E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0684 05174660794412d7a6166c32071c3ba5 518 SUPERFAMILY SSF53300 370 498 3.85E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0684 05174660794412d7a6166c32071c3ba5 518 Gene3D G3DSA:3.40.50.410 372 476 1.9E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO0684 05174660794412d7a6166c32071c3ba5 518 Gene3D G3DSA:3.40.50.410 160 224 1.9E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A YPO3819 89ac6633759986a9c5b769701740ec8e 208 Pfam PF07947 YhhN-like protein 26 206 4.9E-44 T 22-04-2016 IPR012506 YhhN-like GO:0016021 YPO2073 f74659843bfaaf3383c1ac7c26cd8f08 195 Pfam PF03843 Outer membrane lipoprotein Slp family 24 168 2.4E-47 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YPO2073 f74659843bfaaf3383c1ac7c26cd8f08 195 PANTHER PTHR37530 5 195 1.8E-68 T 22-04-2016 YPO2073 f74659843bfaaf3383c1ac7c26cd8f08 195 PIRSF PIRSF004982 11 191 3.0E-47 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YPO2073 f74659843bfaaf3383c1ac7c26cd8f08 195 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 21 190 3.2E-61 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YPO3994 05d74d1cf2321ac67797ce71a57c0527 572 PIRSF PIRSF001432 1 565 2.2E-279 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YPO3994 05d74d1cf2321ac67797ce71a57c0527 572 Pfam PF06917 Periplasmic pectate lyase 19 572 0.0 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YPO2166 8a8f2a6f339b06866761f056e0c9aa84 96 Pfam PF07383 Protein of unknown function (DUF1496) 36 94 8.8E-25 T 22-04-2016 IPR009971 Protein of unknown function DUF1496 YPO0843 de268af37d90ea40f248ad744256f18a 495 PANTHER PTHR35339 25 495 2.3E-185 T 22-04-2016 YPO0843 de268af37d90ea40f248ad744256f18a 495 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 63 408 6.9E-86 T 22-04-2016 IPR016624 Uncharacterised conserved protein UCP014753 YPO2549 56fc6812360c8a20be42c9fe714225e0 325 PANTHER PTHR11432 1 323 8.2E-244 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YPO2549 56fc6812360c8a20be42c9fe714225e0 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 YPO2549 56fc6812360c8a20be42c9fe714225e0 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 YPO2549 56fc6812360c8a20be42c9fe714225e0 325 Pfam PF00146 NADH dehydrogenase 17 316 1.9E-120 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YPO2549 56fc6812360c8a20be42c9fe714225e0 325 PANTHER PTHR11432:SF8 1 323 8.2E-244 T 22-04-2016 YPO2549 56fc6812360c8a20be42c9fe714225e0 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.932 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YPO3813 5fa2954969d3fc66102013b5e1c896fc 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YPO3813 5fa2954969d3fc66102013b5e1c896fc 222 Gene3D G3DSA:3.40.50.300 1 215 7.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3813 5fa2954969d3fc66102013b5e1c896fc 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 7.0E-94 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 YPO3813 5fa2954969d3fc66102013b5e1c896fc 222 SMART SM00382 27 214 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YPO3813 5fa2954969d3fc66102013b5e1c896fc 222 Pfam PF00005 ABC transporter 18 165 7.8E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YPO3813 5fa2954969d3fc66102013b5e1c896fc 222 PANTHER PTHR24220:SF470 3 215 6.3E-126 T 22-04-2016 YPO3813 5fa2954969d3fc66102013b5e1c896fc 222 SUPERFAMILY SSF52540 1 216 2.18E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3813 5fa2954969d3fc66102013b5e1c896fc 222 PANTHER PTHR24220 3 215 6.3E-126 T 22-04-2016 YPO0429 8c7b3332eb91e56a2a436faef2c2c78a 147 SUPERFAMILY SSF55729 3 145 2.74E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO0429 8c7b3332eb91e56a2a436faef2c2c78a 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 142 1.4E-44 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 YPO0429 8c7b3332eb91e56a2a436faef2c2c78a 147 Gene3D G3DSA:3.40.630.30 3 145 1.6E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YPO0429 8c7b3332eb91e56a2a436faef2c2c78a 147 PANTHER PTHR23091:SF247 3 146 1.8E-35 T 22-04-2016 YPO0429 8c7b3332eb91e56a2a436faef2c2c78a 147 PANTHER PTHR23091 3 146 1.8E-35 T 22-04-2016 YPO0429 8c7b3332eb91e56a2a436faef2c2c78a 147 Pfam PF00583 Acetyltransferase (GNAT) family 49 120 2.5E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YPO3242 d8435b5d272d43ee75044fbc9608f3f8 257 Pfam PF13230 Glutamine amidotransferases class-II 1 253 1.2E-113 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 YPO3242 d8435b5d272d43ee75044fbc9608f3f8 257 SUPERFAMILY SSF56235 2 252 3.75E-51 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO3242 d8435b5d272d43ee75044fbc9608f3f8 257 PANTHER PTHR11907 1 257 3.0E-133 T 22-04-2016 YPO3242 d8435b5d272d43ee75044fbc9608f3f8 257 Gene3D G3DSA:3.60.20.10 1 248 1.3E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YPO3242 d8435b5d272d43ee75044fbc9608f3f8 257 PANTHER PTHR11907:SF10 1 257 3.0E-133 T 22-04-2016 YPO1040 b989c9d2c8daa1939c9314eed8647913 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 2.7E-57 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 YPO1040 b989c9d2c8daa1939c9314eed8647913 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.444 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 YPO1040 b989c9d2c8daa1939c9314eed8647913 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 2.0E-67 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 YPO1774 fd6cca415565595131f78e5e75b11a49 85 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 1.8E-27 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 YPO1774 fd6cca415565595131f78e5e75b11a49 85 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.122 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 YPO1774 fd6cca415565595131f78e5e75b11a49 85 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 46 6.0E-19 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 YPO1097 7f72326531575144b7e613e534e20887 362 Pfam PF14130 Domain of unknown function (DUF4297) 16 222 1.3E-55 T 22-04-2016 IPR025382 Domain of unknown function DUF4297 YPO0399 09237d1434703fe95a64c545123e2aa1 398 Pfam PF05987 Bacterial protein of unknown function (DUF898) 12 390 5.7E-101 T 22-04-2016 IPR010295 Protein of unknown function DUF898 YPO1613 8e345356000c2dcec065be27b5371e0d 191 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 190 35.658 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB YPO1613 8e345356000c2dcec065be27b5371e0d 191 Pfam PF13036 Peptidoglycan-synthase activator LpoB 8 188 2.1E-48 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB YPO1613 8e345356000c2dcec065be27b5371e0d 191 PANTHER PTHR40593 1 191 4.2E-102 T 22-04-2016 YPO1613 8e345356000c2dcec065be27b5371e0d 191 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 2 190 5.4E-59 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB YPO0432 c80a6aefd715a6c926b9b092ada92bbd 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.0E-12 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 YPO0432 c80a6aefd715a6c926b9b092ada92bbd 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 18.072 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 YPO0432 c80a6aefd715a6c926b9b092ada92bbd 53 PIRSF PIRSF036466 1 53 1.6E-18 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 YPO0262 32ccc5c3faeb60fe4802a0c4d9cde4a0 83 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 45 83 2.2E-22 T 22-04-2016 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 YPO0983 299fa75be9dcaa0bc702874c11944895 216 PANTHER PTHR10794 11 206 1.2E-29 T 22-04-2016 YPO0983 299fa75be9dcaa0bc702874c11944895 216 Pfam PF02517 CAAX protease self-immunity 114 206 4.9E-19 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 YPO3332 ec5d0af835cdf215e2df688cdbd2341b 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 316 9.2E-24 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YPO3332 ec5d0af835cdf215e2df688cdbd2341b 345 PANTHER PTHR32196 1 340 7.0E-194 T 22-04-2016 YPO3332 ec5d0af835cdf215e2df688cdbd2341b 345 PANTHER PTHR32196:SF39 1 340 7.0E-194 T 22-04-2016 YPO0882 1cb1afc3a976bd9cb74d6e378a11db15 98 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 97 2.4E-30 T 22-04-2016 IPR031451 mRNA interferase MqsR GO:0009372|GO:0017148|GO:0042710 YPO2731 4d72f620e0affb5adb7e04e0a255c226 679 Pfam PF09972 Predicted membrane protein (DUF2207) 52 607 2.8E-68 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane YPO1348 c5b119ca4c861d700e04fed32e42b816 281 PANTHER PTHR22911:SF6 2 280 1.5E-67 T 22-04-2016 YPO1348 c5b119ca4c861d700e04fed32e42b816 281 SUPERFAMILY SSF103481 177 277 8.37E-12 T 22-04-2016 YPO1348 c5b119ca4c861d700e04fed32e42b816 281 SUPERFAMILY SSF103481 38 136 3.92E-14 T 22-04-2016 YPO1348 c5b119ca4c861d700e04fed32e42b816 281 Pfam PF00892 EamA-like transporter family 146 270 8.9E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO1348 c5b119ca4c861d700e04fed32e42b816 281 Pfam PF00892 EamA-like transporter family 4 133 5.7E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YPO1348 c5b119ca4c861d700e04fed32e42b816 281 PANTHER PTHR22911 2 280 1.5E-67 T 22-04-2016 YPO0193 4f19fc96f9480c0039b50ad545b167eb 195 Gene3D G3DSA:3.10.50.40 126 141 5.4E-16 T 22-04-2016 YPO0193 4f19fc96f9480c0039b50ad545b167eb 195 Gene3D G3DSA:3.10.50.40 2 80 5.4E-16 T 22-04-2016 YPO0193 4f19fc96f9480c0039b50ad545b167eb 195 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 7.4E-9 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YPO0193 4f19fc96f9480c0039b50ad545b167eb 195 SUPERFAMILY SSF54534 2 140 2.36E-32 T 22-04-2016 YPO0193 4f19fc96f9480c0039b50ad545b167eb 195 PANTHER PTHR10516 129 194 1.1E-71 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO0193 4f19fc96f9480c0039b50ad545b167eb 195 PANTHER PTHR10516 1 83 1.1E-71 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO0193 4f19fc96f9480c0039b50ad545b167eb 195 PANTHER PTHR10516:SF316 129 194 1.1E-71 T 22-04-2016 YPO0193 4f19fc96f9480c0039b50ad545b167eb 195 PANTHER PTHR10516:SF316 1 83 1.1E-71 T 22-04-2016 YPO3895 a6c87679cd152bea5537929e8b20c72e 161 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 9 159 3.6E-66 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPO0563 f1ff304ce5ab0e3b56e714c7570e6281 177 Hamap MF_01332 Secretion monitor [secM]. 1 177 43.822 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YPO0563 f1ff304ce5ab0e3b56e714c7570e6281 177 PIRSF PIRSF004572 1 177 1.1E-86 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YPO0563 f1ff304ce5ab0e3b56e714c7570e6281 177 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 174 3.5E-58 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YPO0563 f1ff304ce5ab0e3b56e714c7570e6281 177 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 177 3.0E-91 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YPO2326 b656dcc0445635f51d95774152e4a74c 123 Pfam PF07027 Protein of unknown function (DUF1318) 35 123 6.2E-30 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 YPO2326 b656dcc0445635f51d95774152e4a74c 123 PIRSF PIRSF025560 1 123 1.0E-44 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 YPO1157 7f49cc6200c1de1e495a8d5ae32bc862 81 Gene3D G3DSA:1.10.720.30 14 71 7.3E-33 T 22-04-2016 IPR003034 SAP domain YPO1157 7f49cc6200c1de1e495a8d5ae32bc862 81 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 7 68 8.5E-35 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 YPO0244 224c4e179e59c56496c9b177c58da1c6 145 PANTHER PTHR38692:SF1 1 145 1.0E-76 T 22-04-2016 YPO0244 224c4e179e59c56496c9b177c58da1c6 145 Pfam PF04361 Protein of unknown function (DUF494) 4 145 1.2E-51 T 22-04-2016 IPR007456 Smg YPO0244 224c4e179e59c56496c9b177c58da1c6 145 PANTHER PTHR38692 1 145 1.0E-76 T 22-04-2016 YPO0244 224c4e179e59c56496c9b177c58da1c6 145 Hamap MF_00598 Protein Smg [smg]. 1 145 24.702 T 22-04-2016 IPR007456 Smg YPO1757 07c23e56a12d22fc79c4984bc930474e 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 1.2E-123 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YPO1757 07c23e56a12d22fc79c4984bc930474e 265 PANTHER PTHR32502:SF4 1 265 3.6E-178 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YPO1757 07c23e56a12d22fc79c4984bc930474e 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 4.3E-74 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YPO1757 07c23e56a12d22fc79c4984bc930474e 265 PANTHER PTHR32502 1 265 3.6E-178 T 22-04-2016 YPO0304 ca74a8fb952f8280a6db20029aef5a46 85 SUPERFAMILY SSF103473 21 83 1.7E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain YPO2426 c738566ad5e8d541cb366667f0470f95 152 Pfam PF10697 Protein of unknown function (DUF2502) 23 102 9.3E-34 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 YPO1713 432951570d7c285e4ee4f5e7e166b2f1 388 Pfam PF14583 Oligogalacturonate lyase 1 386 1.2E-259 T 22-04-2016 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6|UniPathway: UPA00545 YPO1713 432951570d7c285e4ee4f5e7e166b2f1 388 SUPERFAMILY SSF82171 15 382 2.75E-30 T 22-04-2016 YPO1713 432951570d7c285e4ee4f5e7e166b2f1 388 Gene3D G3DSA:2.130.10.10 7 384 7.7E-78 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YPO1799 45b7ae7312658bc95de91bf697f30e79 137 PANTHER PTHR30435 2 135 1.4E-54 T 22-04-2016 YPO1799 45b7ae7312658bc95de91bf697f30e79 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 4.8E-42 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YPO1799 45b7ae7312658bc95de91bf697f30e79 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YPO1799 45b7ae7312658bc95de91bf697f30e79 137 Pfam PF00460 Flagella basal body rod protein 9 39 3.0E-12 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YPO1799 45b7ae7312658bc95de91bf697f30e79 137 PIRSF PIRSF002889 1 137 4.0E-41 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YPO1799 45b7ae7312658bc95de91bf697f30e79 137 PANTHER PTHR30435:SF12 2 135 1.4E-54 T 22-04-2016 YPO2901 0655428662fdac58aaf86e97d0fc6e87 340 Pfam PF03824 High-affinity nickel-transport protein 75 326 8.4E-42 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 YPO2901 0655428662fdac58aaf86e97d0fc6e87 340 PANTHER PTHR40659 5 339 2.2E-99 T 22-04-2016 YPO2346 edb11f99935fcc9dab09632702c036ed 152 Pfam PF08808 RES domain 2 147 1.4E-24 T 22-04-2016 IPR014914 RES domain YPO2346 edb11f99935fcc9dab09632702c036ed 152 SMART SM00953 15 140 7.6E-34 T 22-04-2016 IPR014914 RES domain YPO3704 40c108a557f1fb6247796c98ca9ce043 357 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 5 354 1.0E-119 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO3704 40c108a557f1fb6247796c98ca9ce043 357 PANTHER PTHR35370 1 350 3.9E-111 T 22-04-2016 YPO3704 40c108a557f1fb6247796c98ca9ce043 357 PANTHER PTHR35370:SF4 1 350 3.9E-111 T 22-04-2016 YPO3704 40c108a557f1fb6247796c98ca9ce043 357 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 351 9.2E-127 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YPO0196 45380dc076f602c4d083132ba0aafc2e 244 PANTHER PTHR35568 14 241 1.4E-182 T 22-04-2016 YPO0196 45380dc076f602c4d083132ba0aafc2e 244 Pfam PF13309 HTH domain 175 232 3.4E-19 T 22-04-2016 YPO0196 45380dc076f602c4d083132ba0aafc2e 244 Pfam PF08348 YheO-like PAS domain 33 141 2.7E-35 T 22-04-2016 IPR013559 YheO-like YPO0196 45380dc076f602c4d083132ba0aafc2e 244 PANTHER PTHR35568:SF3 14 241 1.4E-182 T 22-04-2016 YPO0196 45380dc076f602c4d083132ba0aafc2e 244 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 145 5.0E-63 T 22-04-2016 IPR013559 YheO-like YPO3176 299d19dceef93ef020d8030047eff0bf 306 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 88 104 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPO3176 299d19dceef93ef020d8030047eff0bf 306 PANTHER PTHR12001:SF23 9 287 2.6E-107 T 22-04-2016 YPO3176 299d19dceef93ef020d8030047eff0bf 306 PANTHER PTHR12001 9 287 2.6E-107 T 22-04-2016 IPR017446 Polyprenyl synthetase-related YPO3176 299d19dceef93ef020d8030047eff0bf 306 Gene3D G3DSA:1.10.600.10 8 301 3.3E-89 T 22-04-2016 IPR008949 Isoprenoid synthase domain YPO3176 299d19dceef93ef020d8030047eff0bf 306 SUPERFAMILY SSF48576 9 290 4.32E-86 T 22-04-2016 IPR008949 Isoprenoid synthase domain YPO3176 299d19dceef93ef020d8030047eff0bf 306 Pfam PF00348 Polyprenyl synthetase 38 278 2.8E-56 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPO3176 299d19dceef93ef020d8030047eff0bf 306 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YPO2637 c501220ea87ba14bcd81957c49e79617 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 6.5E-8 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 YPO0112 68e7a3c221b6fdb87eaec8ec265331f5 151 PANTHER PTHR37290:SF1 2 145 1.3E-88 T 22-04-2016 YPO0112 68e7a3c221b6fdb87eaec8ec265331f5 151 Pfam PF05360 yiaA/B two helix domain 12 64 6.3E-21 T 22-04-2016 IPR008024 YiaAB two helix YPO0112 68e7a3c221b6fdb87eaec8ec265331f5 151 Pfam PF05360 yiaA/B two helix domain 75 127 2.5E-22 T 22-04-2016 IPR008024 YiaAB two helix YPO0112 68e7a3c221b6fdb87eaec8ec265331f5 151 PANTHER PTHR37290 2 145 1.3E-88 T 22-04-2016 YPO1421 1f1442ee1471d69c09828adbd36b2cb6 541 PANTHER PTHR30462 2 541 0.0 T 22-04-2016 YPO1421 1f1442ee1471d69c09828adbd36b2cb6 541 PANTHER PTHR30462:SF2 2 541 0.0 T 22-04-2016 YPO1421 1f1442ee1471d69c09828adbd36b2cb6 541 Pfam PF02470 MlaD protein 283 384 7.6E-13 T 22-04-2016 IPR003399 Mce/MlaD YPO1421 1f1442ee1471d69c09828adbd36b2cb6 541 Pfam PF02470 MlaD protein 36 127 4.1E-11 T 22-04-2016 IPR003399 Mce/MlaD YPO1421 1f1442ee1471d69c09828adbd36b2cb6 541 Pfam PF02470 MlaD protein 153 211 3.8E-8 T 22-04-2016 IPR003399 Mce/MlaD YPO2564 3cceeccd8c6e7fe998c062118c6e9e68 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 35.697 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 YPO2564 3cceeccd8c6e7fe998c062118c6e9e68 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 8.5E-58 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 YPO0133 06dc8a80f190855b1b1a7a7d03d50f2a 75 SMART SM00899 1 72 4.1E-7 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YPO0133 06dc8a80f190855b1b1a7a7d03d50f2a 75 PANTHER PTHR33238 3 75 3.5E-22 T 22-04-2016 YPO0133 06dc8a80f190855b1b1a7a7d03d50f2a 75 SUPERFAMILY SSF50037 6 70 3.36E-14 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal YPO0133 06dc8a80f190855b1b1a7a7d03d50f2a 75 Pfam PF04023 FeoA domain 8 63 2.9E-6 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YPO3961 b8f191d6e81432d104ec117c3d68c3b5 227 Pfam PF07385 Protein of unknown function (DUF1498) 1 223 1.5E-100 T 22-04-2016 IPR010864 Protein of unknown function DUF1498 KEGG: 00040+5.3.1.15 YPO3961 b8f191d6e81432d104ec117c3d68c3b5 227 SUPERFAMILY SSF51182 82 175 9.45E-5 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO3276 18e525c0c396ccaeaced5caa8156be4a 243 Gene3D G3DSA:3.60.140.10 3 242 2.3E-92 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPO3276 18e525c0c396ccaeaced5caa8156be4a 243 SUPERFAMILY SSF64438 3 242 1.72E-86 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPO3276 18e525c0c396ccaeaced5caa8156be4a 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 2.3E-74 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPO3276 18e525c0c396ccaeaced5caa8156be4a 243 PANTHER PTHR30616:SF3 1 243 3.1E-156 T 22-04-2016 YPO3276 18e525c0c396ccaeaced5caa8156be4a 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 1.5E-67 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPO3276 18e525c0c396ccaeaced5caa8156be4a 243 PANTHER PTHR30616 1 243 3.1E-156 T 22-04-2016 YPO2262 0ceac885ac3cc2137de253d70b19cd42 514 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 470 3.6E-141 T 22-04-2016 IPR010352 Protein of unknown function DUF945 YPO1995 d9cf048577e9e9a84617e95e6190c2ec 310 SUPERFAMILY SSF51182 40 209 2.71E-5 T 22-04-2016 IPR011051 RmlC-like cupin domain YPO0467 59f1180573866770b8d27befde75fc61 203 PANTHER PTHR30178:SF6 1 203 1.4E-141 T 22-04-2016 YPO0467 59f1180573866770b8d27befde75fc61 203 PANTHER PTHR30178 1 203 1.4E-141 T 22-04-2016 YPO0467 59f1180573866770b8d27befde75fc61 203 Pfam PF01184 GPR1/FUN34/yaaH family 4 180 2.8E-44 T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 YPO3010 36b1637c771018f69f9c337a13bfb74d 410 Gene3D G3DSA:3.80.10.10 59 178 1.1E-9 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPO3010 36b1637c771018f69f9c337a13bfb74d 410 SUPERFAMILY SSF52058 63 181 5.44E-9 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like YPO1552 e1d7a3da24dac2925053ba157a96ed51 144 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 54 135 4.7E-14 T 22-04-2016 IPR032032 Type VI secretion system (T6SS), amidase immunity protein YPO0277 56e327385b41c2a8229945c3511d5f4c 428 PANTHER PTHR35334:SF5 1 428 0.0 T 22-04-2016 YPO0277 56e327385b41c2a8229945c3511d5f4c 428 PANTHER PTHR35334 1 428 0.0 T 22-04-2016 YPO2118 c3b98d9721b922d4ca6d958399f75e60 73 Pfam PF08809 Phage related hypothetical protein (DUF1799) 3 67 1.9E-21 T 22-04-2016 IPR014915 Bacteriophage TLS, TfmB YPO0586 f2e69ba2d1b39804de49bf43176175ae 169 PANTHER PTHR30399:SF4 1 167 5.3E-114 T 22-04-2016 YPO0586 f2e69ba2d1b39804de49bf43176175ae 169 Pfam PF01863 Protein of unknown function DUF45 46 149 1.9E-11 T 22-04-2016 IPR002725 Protein of unknown function DUF45 YPO0586 f2e69ba2d1b39804de49bf43176175ae 169 PANTHER PTHR30399 1 167 5.3E-114 T 22-04-2016 YPO0498 59c5d1d278d4da5a6f6e6a04169a79ea 247 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 184 247 8.4E-11 T 22-04-2016 IPR018754 Protein of unknown function DUF2285 YPO1941 af16b4ccfe5a3691e790e1e7819a90a7 639 PANTHER PTHR31632:SF4 368 613 3.0E-125 T 22-04-2016 YPO1941 af16b4ccfe5a3691e790e1e7819a90a7 639 PANTHER PTHR31632 368 613 3.0E-125 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YPO1941 af16b4ccfe5a3691e790e1e7819a90a7 639 Pfam PF03239 Iron permease FTR1 family 156 556 1.4E-95 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YPO0142 97b0518deeb16f7bce8b12c1b3702497 715 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 22 704 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 YPO0142 97b0518deeb16f7bce8b12c1b3702497 715 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 710 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 YPO2915 6ddb68b2e2351cf33c93199a3f8c7ba7 331 Pfam PF13942 YfhG lipoprotein 44 217 5.6E-78 T 22-04-2016 IPR025262 Quorum-sensing regulator protein G YPO2915 6ddb68b2e2351cf33c93199a3f8c7ba7 331 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 1 219 8.0E-120 T 22-04-2016 YPO0130 d0346e7fedfbc017499471a4b06034e8 89 Pfam PF07338 Protein of unknown function (DUF1471) 36 89 4.8E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO0130 d0346e7fedfbc017499471a4b06034e8 89 Gene3D G3DSA:3.30.1660.10 18 89 1.3E-26 T 22-04-2016 IPR025543 Dodecin-like YPO0130 d0346e7fedfbc017499471a4b06034e8 89 SUPERFAMILY SSF159871 3 89 2.35E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YPO0130 d0346e7fedfbc017499471a4b06034e8 89 PANTHER PTHR34156:SF9 2 89 3.0E-52 T 22-04-2016 YPO0130 d0346e7fedfbc017499471a4b06034e8 89 PANTHER PTHR34156 2 89 3.0E-52 T 22-04-2016 YPO2100 024bbb4b2781f0152d6ba005ea6352db 265 Pfam PF03374 Phage antirepressor protein KilAC domain 157 256 2.4E-25 T 22-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 YPO2504 17acfc09e1255a46e2b399361cf703dc 180 Pfam PF16809 NleF caspase inhibitor 37 179 2.7E-59 T 22-04-2016 IPR031829 Effector protein NleF YPO2275 21515c1ad03a543e1ca35ec7d35ab9b1 105 ProDom PD071248 DNA-BINDING SINGLE STRANDED DNA PHAGE PROTIEN GPV HELIX-DESTABILIZING SINGLE-STRANDED REPLICATION 5 104 2.0E-51 T 22-04-2016 YPO0373 287688b229177e55911b4c10816a0f22 101 Gene3D G3DSA:2.30.30.100 1 74 1.1E-37 T 22-04-2016 YPO0373 287688b229177e55911b4c10816a0f22 101 SUPERFAMILY SSF50182 7 69 5.02E-24 T 22-04-2016 IPR010920 LSM domain YPO0373 287688b229177e55911b4c10816a0f22 101 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.244 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 YPO0373 287688b229177e55911b4c10816a0f22 101 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.8E-29 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 YPO3614 19b780f3306f3543544988847ab708e5 140 Gene3D G3DSA:3.40.1000.10 1 138 9.5E-43 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO3614 19b780f3306f3543544988847ab708e5 140 Pfam PF08786 Domain of unknown function (DUF1795) 6 133 7.0E-35 T 22-04-2016 IPR014894 Protein DcrB YPO3614 19b780f3306f3543544988847ab708e5 140 SUPERFAMILY SSF55724 1 137 6.8E-44 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO2987 cbbc10c404dd962bdc5c232f854c4878 115 Pfam PF14282 FlxA-like protein 13 107 2.3E-23 T 22-04-2016 IPR025577 FlxA-like protein YPO1741 06be050030ade4d14f88e674e8c99b61 99 Pfam PF10765 Protein of unknown function (DUF2591) 29 97 5.1E-14 T 22-04-2016 IPR019701 Bacteriophage P22, NinX YPO3987 8d2dc9f79e88b75ba959c54c927ac2c1 740 Pfam PF05170 AsmA family 1 622 2.5E-115 T 22-04-2016 IPR007844 AsmA YPO3987 8d2dc9f79e88b75ba959c54c927ac2c1 740 PANTHER PTHR30441 112 732 4.8E-181 T 22-04-2016 YPO3987 8d2dc9f79e88b75ba959c54c927ac2c1 740 PANTHER PTHR30441 6 90 4.8E-181 T 22-04-2016 YPO3987 8d2dc9f79e88b75ba959c54c927ac2c1 740 PANTHER PTHR30441:SF2 112 732 4.8E-181 T 22-04-2016 YPO3987 8d2dc9f79e88b75ba959c54c927ac2c1 740 PANTHER PTHR30441:SF2 6 90 4.8E-181 T 22-04-2016 YPO3226 48949eddca3d42d2eb7132ad7ead68e5 101 Pfam PF16083 LydA holin phage, holin superfamily III 15 93 1.2E-21 T 22-04-2016 IPR032126 LydA-like holin YPO1863 bba318e8d59d26d4c87a289382df2b95 113 Pfam PF06942 GlpM protein 5 111 2.7E-50 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC YPO1863 bba318e8d59d26d4c87a289382df2b95 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 14 111 2.0E-49 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC YPO2380 2f0c7cc8fe3d0d3e28e689c7806436e0 984 PANTHER PTHR11219 100 692 4.3E-288 T 22-04-2016 YPO2380 2f0c7cc8fe3d0d3e28e689c7806436e0 984 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 609 689 2.3E-26 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 YPO2380 2f0c7cc8fe3d0d3e28e689c7806436e0 984 PANTHER PTHR11219:SF45 100 692 4.3E-288 T 22-04-2016 YPO1328 4fb9b927e55646cc660570b6c2cda65a 104 Pfam PF07214 Protein of unknown function (DUF1418) 1 97 9.6E-41 T 22-04-2016 IPR010815 Protein of unknown function DUF1418 YPO3782 d0aa0e377f6c02fe9212c6b2c44f6f6f 477 PANTHER PTHR30563 1 476 8.2E-154 T 22-04-2016 YPO3782 d0aa0e377f6c02fe9212c6b2c44f6f6f 477 Pfam PF02646 RmuC family 147 443 4.0E-105 T 22-04-2016 IPR003798 DNA recombination RmuC YPO2865 d1208f2456da1237a858d89259f0d144 131 Pfam PF06836 Protein of unknown function (DUF1240) 37 131 6.6E-40 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPO1701 bfbc34f443a6ae4ce1f6f43d05d1ffbc 883 PANTHER PTHR30462:SF0 1 882 0.0 T 22-04-2016 YPO1701 bfbc34f443a6ae4ce1f6f43d05d1ffbc 883 Pfam PF02470 MlaD protein 754 813 2.7E-8 T 22-04-2016 IPR003399 Mce/MlaD YPO1701 bfbc34f443a6ae4ce1f6f43d05d1ffbc 883 Pfam PF02470 MlaD protein 163 220 1.7E-6 T 22-04-2016 IPR003399 Mce/MlaD YPO1701 bfbc34f443a6ae4ce1f6f43d05d1ffbc 883 Pfam PF02470 MlaD protein 395 452 4.0E-6 T 22-04-2016 IPR003399 Mce/MlaD YPO1701 bfbc34f443a6ae4ce1f6f43d05d1ffbc 883 Pfam PF02470 MlaD protein 280 348 3.5E-6 T 22-04-2016 IPR003399 Mce/MlaD YPO1701 bfbc34f443a6ae4ce1f6f43d05d1ffbc 883 Pfam PF02470 MlaD protein 641 729 2.6E-10 T 22-04-2016 IPR003399 Mce/MlaD YPO1701 bfbc34f443a6ae4ce1f6f43d05d1ffbc 883 Pfam PF02470 MlaD protein 46 137 1.2E-15 T 22-04-2016 IPR003399 Mce/MlaD YPO1701 bfbc34f443a6ae4ce1f6f43d05d1ffbc 883 PANTHER PTHR30462 1 882 0.0 T 22-04-2016 YPO2991 717136bbc80a327119bc0dd8cad4d5d4 244 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 1 240 28.707 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 YPO2991 717136bbc80a327119bc0dd8cad4d5d4 244 PANTHER PTHR37468 1 242 2.3E-107 T 22-04-2016 YPO2991 717136bbc80a327119bc0dd8cad4d5d4 244 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 6 222 6.1E-46 T 22-04-2016 YPO0572 fc9b2680001628c9c3ad61856e0d4b52 126 Pfam PF06476 Protein of unknown function (DUF1090) 13 120 3.2E-38 T 22-04-2016 IPR009468 Protein of unknown function DUF1090 YPO4107 3a1faeaa1df2c0f1cab04adee9143b7b 442 PANTHER PTHR11119:SF9 5 434 5.1E-182 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 YPO4107 3a1faeaa1df2c0f1cab04adee9143b7b 442 PIRSF PIRSF005353 3 442 5.8E-178 T 22-04-2016 IPR026033 Purine permease PbuG-like YPO4107 3a1faeaa1df2c0f1cab04adee9143b7b 442 Pfam PF00860 Permease family 29 402 9.3E-44 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO4107 3a1faeaa1df2c0f1cab04adee9143b7b 442 PANTHER PTHR11119 5 434 5.1E-182 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YPO0284 dac91b2b712cd37355d2a46f50e668a2 216 PANTHER PTHR15020 1 206 6.2E-42 T 22-04-2016 YPO0284 dac91b2b712cd37355d2a46f50e668a2 216 SUPERFAMILY SSF51735 4 206 5.89E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0284 dac91b2b712cd37355d2a46f50e668a2 216 Gene3D G3DSA:3.40.50.720 4 207 4.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO0284 dac91b2b712cd37355d2a46f50e668a2 216 Pfam PF13460 NAD(P)H-binding 8 195 4.8E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YPO3336 8612e2f47a223bc535c30bb523e9f4fe 101 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 19 79 2.6E-23 T 22-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system YPO2631 05eb4d389b90934f6fa35e0c7f2248a5 473 Pfam PF03573 outer membrane porin, OprD family 39 442 5.2E-21 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 YPO2631 05eb4d389b90934f6fa35e0c7f2248a5 473 Gene3D G3DSA:2.40.160.10 44 473 9.7E-50 T 22-04-2016 IPR023614 Porin domain YPO1354 d6a0a01660040c52746bb85e6203b804 191 Pfam PF12883 Protein of unknown function (DUF3828) 41 174 1.9E-13 T 22-04-2016 IPR024289 Domain of unknown function DUF3828 YPO1612 3c8c3e826b9b647bccea1df2ab2736ad 129 Pfam PF07233 Protein of unknown function (DUF1425) 38 127 2.0E-26 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 YPO3856 b074fa787470256b8392c6bcde71eac0 454 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 38.509 T 22-04-2016 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 UniPathway: UPA00566 YPO3856 b074fa787470256b8392c6bcde71eac0 454 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 442 8.3E-264 T 22-04-2016 YPO1798 ae9d031608ab5e2a3973171ba6a8d462 232 PANTHER PTHR36307 1 231 8.0E-33 T 22-04-2016 YPO1798 ae9d031608ab5e2a3973171ba6a8d462 232 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 98 230 6.2E-44 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPO1798 ae9d031608ab5e2a3973171ba6a8d462 232 SMART SM00858 108 170 1.4E-14 T 22-04-2016 IPR013974 SAF domain YPO1798 ae9d031608ab5e2a3973171ba6a8d462 232 Pfam PF13144 Chaperone for flagella basal body P-ring formation 38 230 4.3E-55 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPO3611 fb172ee63fa8f9f56e46c8b02d18c03d 63 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 10 55 3.4E-18 T 22-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 YPO2087 7fffdbd80003438762fa6380f3cbfb36 86 Pfam PF06806 Putative excisionase (DUF1233) 4 73 9.4E-37 T 22-04-2016 IPR009634 Bacteriophage 933W, Xis excisionase YPO1882 40089f009c491763e1646387a9efa849 96 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 12 90 2.3E-23 T 22-04-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system YPO3893 e34278c68bc4d83b4f8d3c383c34e49a 153 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 151 5.8E-64 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPO2012 6ea173bd679e4c8409a08dfc97cd0ebe 90 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 4.5E-45 T 22-04-2016 IPR019698 Protein of unknown function DUF2583 YPO0177 a49dc447456fc4accdbb24c44f3291db 143 Pfam PF06836 Protein of unknown function (DUF1240) 50 143 7.0E-33 T 22-04-2016 IPR010665 Protein of unknown function DUF1240 YPO0287 3dd3bf506c475b3de7ee269a88761137 266 Gene3D G3DSA:3.20.20.220 4 265 3.2E-41 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPO0287 3dd3bf506c475b3de7ee269a88761137 266 SUPERFAMILY SSF51730 4 265 5.49E-50 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YPO0287 3dd3bf506c475b3de7ee269a88761137 266 Pfam PF02219 Methylenetetrahydrofolate reductase 4 265 2.7E-34 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YPO0086 bce2a289f2b4b107932c5269e31becf7 211 Pfam PF07305 Protein of unknown function (DUF1454) 18 210 3.5E-84 T 22-04-2016 IPR009918 Protein of unknown function DUF1454 YPO1144 5e69b7b4777c4a7fe9ce935630257dcb 50 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 46 1.1E-30 T 22-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 YPO1144 5e69b7b4777c4a7fe9ce935630257dcb 50 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 47 19.556 T 22-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 YPO2464 a1acb0306e570724bba7f81c2c927e5c 316 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 4 300 9.0E-128 T 22-04-2016 IPR013398 CRISPR-associated protein Csy2 YPO2464 a1acb0306e570724bba7f81c2c927e5c 316 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 5 299 2.5E-104 T 22-04-2016 IPR013398 CRISPR-associated protein Csy2 YPO3817 13e373c4376a9f46072abdc975ed5a96 139 Pfam PF10694 Protein of unknown function (DUF2500) 5 132 2.1E-40 T 22-04-2016 IPR019635 Protein of unknown function DUF2500 YPO0744 96aa02e5e934b5d4b1c872663637c23b 156 Pfam PF03748 Flagellar basal body-associated protein FliL 57 156 1.2E-10 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 YPO1250 230a61bdb769fe904b159db9c93b5587 378 Pfam PF04865 Baseplate J-like protein 66 340 1.2E-84 T 22-04-2016 IPR006949 Baseplate protein J-like YPO1250 230a61bdb769fe904b159db9c93b5587 378 PANTHER PTHR37829 2 378 2.0E-114 T 22-04-2016 YPO3641 61fa7ac68d136268efbdc5c5a11e3256 391 SUPERFAMILY SSF46565 249 289 4.45E-5 T 22-04-2016 IPR001623 DnaJ domain YPO1739 737f27cfbc9d665e9abdf22917cbaa14 72 Pfam PF13996 YobH-like protein 2 65 2.4E-33 T 22-04-2016 IPR025611 YobH-like protein YPO3345 2934c28aa439000c764c9932a2262ec6 92 Pfam PF04703 FaeA-like protein 39 75 1.5E-4 T 22-04-2016 IPR006793 FaeA-like protein GO:0006355|GO:0009289 YPO3345 2934c28aa439000c764c9932a2262ec6 92 Gene3D G3DSA:1.10.10.10 9 92 1.2E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1070 18c0b35e96b10ae902fa39657e505a34 135 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 134 36.594 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 YPO1070 18c0b35e96b10ae902fa39657e505a34 135 Pfam PF16358 RcsF lipoprotein 39 133 4.8E-52 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 YPO0641 e26465c484bbacd8d592841f99787f66 134 SUPERFAMILY SSF160631 31 125 3.53E-5 T 22-04-2016 YPO3499 4e9233c3ab1cc6066fe66ea1f11db51f 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.5E-26 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPO3499 4e9233c3ab1cc6066fe66ea1f11db51f 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 9.1E-22 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPO3499 4e9233c3ab1cc6066fe66ea1f11db51f 111 PANTHER PTHR34182 2 111 4.3E-37 T 22-04-2016 YPO3499 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.7E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPO3499 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.7E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPO3499 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.7E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPO3499 4e9233c3ab1cc6066fe66ea1f11db51f 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.7E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YPO3823 8d6c31a4104b0f9724bb75abf31402f1 175 Pfam PF08786 Domain of unknown function (DUF1795) 41 171 3.1E-26 T 22-04-2016 IPR014894 Protein DcrB YPO2330 624f8099109caab3808a571829ff4c92 150 PANTHER PTHR35535 1 150 1.4E-42 T 22-04-2016 YPO2330 624f8099109caab3808a571829ff4c92 150 Pfam PF03724 META domain 40 140 7.1E-19 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ YPO0602 9c1426beb8dbd5f0c1b404db42e6f747 143 Pfam PF15599 Immunity protein 63 49 129 1.8E-29 T 22-04-2016 IPR028952 Immunity protein 63 YPO1249 2dccdb4d893c145932fd3180b7abacde 151 Pfam PF07409 Phage protein GP46 30 136 3.4E-41 T 22-04-2016 IPR010877 Bacteriophage Mu, Gp46 YPO0817 bb4a6d12d97c5e7c6cd6886d6ac40649 167 Pfam PF11356 Type II secretion system protein C 27 164 3.9E-11 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal YPO1251 71ed0b9a193a1111dcb86f3749db5144 115 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 3 112 1.3E-19 T 22-04-2016 IPR018755 Bacteriophage Mu, Gp48 YPO0899 496e15cb0b679ef7cd711179aafe063a 165 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 3 159 6.3E-68 T 22-04-2016 IPR018681 Protein of unknown function DUF2165, transmembrane YPO2247 ecf740b9d862cdfd5fcd28b626a3198c 147 Pfam PF10754 Protein of unknown function (DUF2569) 7 145 1.1E-45 T 22-04-2016 IPR019690 Protein of unknown function DUF2569 YPO3935 d0bd39ecca66b83b9bcd42122b749d53 154 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 2 152 1.2E-65 T 22-04-2016 IPR010351 Protein of unknown function DUF943 YPO2134 f7e8e9cb136fd02162bc79eb1ba04abe 139 PANTHER PTHR34413 7 139 4.8E-24 T 22-04-2016 YPO2134 f7e8e9cb136fd02162bc79eb1ba04abe 139 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 63 139 2.6E-17 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPO0450 15aa3bdb4df73834110726c17f80446f 207 Pfam PF13689 Domain of unknown function (DUF4154) 63 201 5.5E-33 T 22-04-2016 IPR025293 Protein of unknown function DUF4154 YPO2226 adaa0a2159deba84730598d72ceca993 100 Gene3D G3DSA:1.10.1220.10 3 52 9.1E-8 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YPO2226 adaa0a2159deba84730598d72ceca993 100 SUPERFAMILY SSF47598 2 45 4.08E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YPO2102 b321292440ad4551043e66edcf834d2a 149 Pfam PF10045 Uncharacterized conserved protein (DUF2280) 1 102 7.3E-48 T 22-04-2016 IPR018738 Protein of unknown function DUF2280 YPO2005 42466f0f266e0b2956f030b01c3ce9f5 280 Pfam PF13316 Protein of unknown function (DUF4087) 26 120 1.0E-38 T 22-04-2016 IPR025145 Protein of unknown function DUF4087 YPO2279 5d0af8e0bdf159e2c0bfaf7b0b98bb79 341 Gene3D G3DSA:3.40.50.300 1 197 3.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2279 5d0af8e0bdf159e2c0bfaf7b0b98bb79 341 Pfam PF05707 Zonular occludens toxin (Zot) 4 196 1.7E-26 T 22-04-2016 IPR008900 Zona occludens toxin YPO4049 0b055bfa28d5a81e8683d1a003970298 193 Pfam PF13988 Protein of unknown function (DUF4225) 2 161 1.0E-59 T 22-04-2016 IPR025320 Protein of unknown function DUF4225 YPO4128 671f1d6ac4dff2c4555e30eac6cc0319 127 Pfam PF03899 ATP synthase I chain 13 109 3.0E-18 T 22-04-2016 IPR005598 ATP synthase protein I YPO2090 649761ebb219e9801692a943a4f86464 201 Pfam PF05766 Bacteriophage Lambda NinG protein 3 196 5.0E-83 T 22-04-2016 IPR008713 Bacteriophage lambda NinG YPO3710 7baf0474ab1c1ceb0a05337c610cdf3e 309 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 80 212 3.8E-53 T 22-04-2016 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 YPO3128 3ea94065115fd7e6a8e6aebc948fd956 51 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 2.3E-23 T 22-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related YPO0400 6a192d58f63b614a8ffb2f473ec9f119 178 Gene3D G3DSA:1.10.1200.20 83 135 7.5E-5 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 YPO1363 424828927a78b70b5d9706f068f6e46f 315 PANTHER PTHR38785 2 315 5.3E-128 T 22-04-2016 YPO1363 424828927a78b70b5d9706f068f6e46f 315 Pfam PF04393 Protein of unknown function (DUF535) 33 310 4.4E-103 T 22-04-2016 IPR007488 Protein of unknown function DUF535 YPO2755 d387f0dfcbb6edfdcd6243c7249ee153 92 Pfam PF08891 YfcL protein 4 86 4.8E-37 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL YPO2755 d387f0dfcbb6edfdcd6243c7249ee153 92 Gene3D G3DSA:1.10.357.10 5 91 4.1E-4 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YPO2981 bfae9dcde066e749afbcdd2edf8ae569 137 Pfam PF10697 Protein of unknown function (DUF2502) 39 126 7.2E-36 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 YPO2159 600ee7ff8004f50290f191e5727eb39b 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 83 1.4E-27 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 YPO2224 907966836e7afc654960492c9311b78c 103 Pfam PF06305 Protein of unknown function (DUF1049) 23 86 3.4E-19 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 YPO2224 907966836e7afc654960492c9311b78c 103 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 21.939 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 YPO1302 14b42bb119c063557c68da418adda833 162 ProDom PD022058 PSAF MYFF 1 162 2.0E-89 T 22-04-2016 YPO3137 5b8872371b181aea2a9a0dd8083c0c1b 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 117 3.6E-62 T 22-04-2016 IPR019693 Biofilm formation regulator YbaJ YPO0703 3aa355b95fb471a9672fbbb5d737722c 189 Pfam PF11153 Protein of unknown function (DUF2931) 9 188 1.0E-38 T 22-04-2016 IPR021326 Protein of unknown function DUF2931 YPO2657 f004c8fcb81ac54de4443e8eb95b2475 69 Pfam PF04899 MbeD/MobD like 1 58 1.0E-8 T 22-04-2016 IPR006983 MbeD/MobD-like YPO0608 f6444766ea069a385acdb5668956cc58 459 Pfam PF10091 Putative glucoamylase 257 410 1.4E-7 T 22-04-2016 IPR019282 Domain of unknown function DUF2329 YPO2099 277f130de958cc101d0b7d5ea7cc1c8e 152 Pfam PF03245 Bacteriophage Rz lysis protein 26 151 1.8E-45 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 YPO3265 2bcc2054386d42e562e2e551b588c99e 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 105 5.2E-17 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD YPO2760 6c73359c526560ca9f376b022da7bf19 345 PIRSF PIRSF020588 1 344 2.5E-154 T 22-04-2016 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 YPO2229 fa44309a42341fee4ce3296e18590a4c 71 Pfam PF05433 Glycine zipper 2TM domain 34 70 5.6E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YPO3799 4c74362b75a80bf4151aaaf376126bbf 228 SUPERFAMILY SSF49354 20 126 8.9E-7 T 22-04-2016 IPR008962 PapD-like YPO0352 8c05ccdd1ce547391c84b8842f78fc61 128 Pfam PF13698 Domain of unknown function (DUF4156) 37 127 2.2E-32 T 22-04-2016 IPR025294 Protein of unknown function DUF4156 YPO1174 3161400aa1293ca39c53826bf16a6bbe 309 Pfam PF13349 Putative adhesin 85 200 3.5E-8 T 22-04-2016 IPR025164 Putative adhesin YPO0686 41f4d59bd569cd69ab8e37a5983b1dca 156 Pfam PF07811 TadE-like protein 14 55 6.1E-9 T 22-04-2016 IPR012495 TadE-like YPO3486 15fd16183de4dc73b238fb8e97643066 122 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 24 113 3.6E-20 T 22-04-2016 IPR009241 Toxin HigB-like YPO2231 824ebe1eafc90d1c7d3606d3eb2a56f8 82 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 2.0E-26 T 22-04-2016 IPR018680 Protein of unknown function DUF2164 YPO0685 d2326f4b6f3f64cdf1948c2e2e038ed6 168 Pfam PF16964 Putative tight adherence pilin protein F 1 168 1.7E-33 T 22-04-2016 IPR031582 Putative tight adherence pilin protein F YPO3681 c247e88430134801492dd7220f904c5d 833 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 74 263 1.0E-14 T 22-04-2016 IPR018003 Insecticidal toxin complex/plasmid virulence protein YPO1864 72fd037fea58b3d2916bce6e7fbdfdbb 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 1.5E-37 T 22-04-2016 IPR019705 Protein of unknown function DUF2594 YPO3952 f5c1c6865d34c0ac858ec3d3a2bd0b54 77 PANTHER PTHR34319 2 77 1.7E-37 T 22-04-2016 YPO2117 76ae8ea76fbe858c5a256776e82ee264 103 Pfam PF08748 Phage tail assembly chaperone 1 103 7.0E-25 T 22-04-2016 IPR014859 Phage tail assembly chaperone