##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM2280v1
#!genome-build-accession NCBI_Assembly:GCF_000022805.1
##sequence-region NC_017154.1 1 4640720
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=637382
NC_017154.1	RefSeq	region	1	4640720	.	+	.	ID=id0;Dbxref=taxon:637382;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=D106004
NC_017154.1	RefSeq	gene	270	710	.	-	.	ID=gene0;Name=YPD4_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00005;old_locus_tag=YPD4_0001
NC_017154.1	Protein Homology	CDS	270	710	.	-	0	ID=cds0;Parent=gene0;Dbxref=Genbank:WP_002212258.1;Name=WP_002212258.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=FMN-binding protein MioC;protein_id=WP_002212258.1;transl_table=11
NC_017154.1	RefSeq	gene	803	1264	.	-	.	ID=gene1;Name=YPD4_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00010;old_locus_tag=YPD4_0002
NC_017154.1	Protein Homology	CDS	803	1264	.	-	0	ID=cds1;Parent=gene1;Dbxref=Genbank:WP_002212257.1;Name=WP_002212257.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212257.1;transl_table=11
NC_017154.1	RefSeq	gene	1434	2426	.	+	.	ID=gene2;Name=YPD4_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00015;old_locus_tag=YPD4_0003
NC_017154.1	Protein Homology	CDS	1434	2426	.	+	0	ID=cds2;Parent=gene2;Dbxref=Genbank:WP_002212256.1;Name=WP_002212256.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11
NC_017154.1	RefSeq	gene	2525	3991	.	-	.	ID=gene3;Name=YPD4_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00020;old_locus_tag=YPD4_0004
NC_017154.1	Protein Homology	CDS	2525	3991	.	-	0	ID=cds3;Parent=gene3;Dbxref=Genbank:WP_002212255.1;Name=WP_002212255.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=protein ViaA;protein_id=WP_002212255.1;transl_table=11
NC_017154.1	RefSeq	gene	3995	5548	.	-	.	ID=gene4;Name=YPD4_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00025;old_locus_tag=YPD4_0005
NC_017154.1	Protein Homology	CDS	3995	5548	.	-	0	ID=cds4;Parent=gene4;Dbxref=Genbank:WP_002212254.1;Name=WP_002212254.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=ATPase RavA;protein_id=WP_002212254.1;transl_table=11
NC_017154.1	RefSeq	gene	5822	7690	.	+	.	ID=gene5;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=YPD4_RS00030;old_locus_tag=YPD4_0006
NC_017154.1	Protein Homology	CDS	5822	7690	.	+	0	ID=cds5;Parent=gene5;Dbxref=Genbank:WP_002212253.1;Name=WP_002212253.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=low affinity potassium transport system protein kup;protein_id=WP_002212253.1;transl_table=11
NC_017154.1	RefSeq	gene	7895	8314	.	+	.	ID=gene6;Name=YPD4_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00035;old_locus_tag=YPD4_0007
NC_017154.1	Protein Homology	CDS	7895	8314	.	+	0	ID=cds6;Parent=gene6;Dbxref=Genbank:WP_002212252.1;Name=WP_002212252.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11
NC_017154.1	RefSeq	gene	8365	9291	.	+	.	ID=gene7;Name=YPD4_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00040;old_locus_tag=YPD4_0008
NC_017154.1	Protein Homology	CDS	8365	9291	.	+	0	ID=cds7;Parent=gene7;Dbxref=Genbank:WP_002212251.1;Name=WP_002212251.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;product=ribokinase;protein_id=WP_002212251.1;transl_table=11
NC_017154.1	RefSeq	gene	9344	9514	.	+	.	ID=gene8;Name=YPD4_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00045
NC_017154.1	Protein Homology	CDS	9344	9514	.	+	0	ID=cds8;Parent=gene8;Dbxref=Genbank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215906.1;transl_table=11
NC_017154.1	RefSeq	gene	9511	10935	.	-	.	ID=gene9;Name=YPD4_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00050;old_locus_tag=YPD4_0009
NC_017154.1	Protein Homology	CDS	9511	10935	.	-	0	ID=cds9;Parent=gene9;Dbxref=Genbank:WP_002212250.1;Name=WP_002212250.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002212250.1;transl_table=11
NC_017154.1	RefSeq	gene	11015	11704	.	-	.	ID=gene10;Name=YPD4_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00055;old_locus_tag=YPD4_0010
NC_017154.1	Protein Homology	CDS	11015	11704	.	-	0	ID=cds10;Parent=gene10;Dbxref=Genbank:WP_002215905.1;Name=WP_002215905.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002215905.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	11815	17485	.	+	.	ID=id1;gbkey=repeat_region
NC_017154.1	RefSeq	gene	12261	13809	.	+	.	ID=gene11;Name=YPD4_RS00065;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS00065;old_locus_tag=YPD4_r1
NC_017154.1	RefSeq	rRNA	12261	13809	.	+	.	ID=rna0;Parent=gene11;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	exon	12261	13809	.	+	.	ID=id2;Parent=rna0;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	gene	13943	14018	.	+	.	ID=gene12;Name=YPD4_RS00070;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS00070;old_locus_tag=YPD4_t1
NC_017154.1	tRNAscan-SE	tRNA	13943	14018	.	+	.	ID=rna1;Parent=gene12;anticodon=(pos:13977..13979);gbkey=tRNA;product=tRNA-Glu
NC_017154.1	tRNAscan-SE	exon	13943	14018	.	+	.	ID=id3;Parent=rna1;anticodon=(pos:13977..13979);gbkey=tRNA;product=tRNA-Glu
NC_017154.1	RefSeq	gene	14262	17195	.	+	.	ID=gene13;Name=YPD4_RS00075;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS00075;old_locus_tag=YPD4_r2
NC_017154.1	RefSeq	rRNA	14262	17195	.	+	.	ID=rna2;Parent=gene13;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	exon	14262	17195	.	+	.	ID=id4;Parent=rna2;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	gene	17287	17402	.	+	.	ID=gene14;Name=YPD4_RS00080;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS00080
NC_017154.1	cmsearch	rRNA	17287	17402	.	+	.	ID=rna3;Parent=gene14;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	cmsearch	exon	17287	17402	.	+	.	ID=id5;Parent=rna3;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	RefSeq	gene	17553	17783	.	+	.	ID=gene15;Name=YPD4_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22425
NC_017154.1	Protein Homology	CDS	17553	17783	.	+	0	ID=cds11;Parent=gene15;Dbxref=Genbank:WP_025473721.1;Name=WP_025473721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025473721.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	17831	19150	.	+	.	ID=id6;gbkey=repeat_region
NC_017154.1	RefSeq	gene	17905	19113	.	+	.	ID=gene16;Name=YPD4_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00085;old_locus_tag=YPD4_0011
NC_017154.1	Protein Homology	CDS	17905	19113	.	+	0	ID=cds12;Parent=gene16;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	19171	19701	.	-	.	ID=gene17;Name=YPD4_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00090;old_locus_tag=YPD4_0012
NC_017154.1	Protein Homology	CDS	19171	19701	.	-	0	ID=cds13;Parent=gene17;Dbxref=Genbank:WP_002217538.1;Name=WP_002217538.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002217538.1;transl_table=11
NC_017154.1	RefSeq	gene	19701	20288	.	-	.	ID=gene18;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=YPD4_RS00095;old_locus_tag=YPD4_0013
NC_017154.1	Protein Homology	CDS	19701	20288	.	-	0	ID=cds14;Parent=gene18;Dbxref=Genbank:WP_002213171.1;Name=WP_002213171.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;product=molybdenum cofactor guanylyltransferase;protein_id=WP_002213171.1;transl_table=11
NC_017154.1	RefSeq	gene	20442	20711	.	+	.	ID=gene19;Name=YPD4_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00100
NC_017154.1	Protein Homology	CDS	20442	20711	.	+	0	ID=cds15;Parent=gene19;Dbxref=Genbank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213170.1;transl_table=11
NC_017154.1	RefSeq	gene	20791	21777	.	+	.	ID=gene20;Name=YPD4_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00105;old_locus_tag=YPD4_0014
NC_017154.1	Protein Homology	CDS	20791	21777	.	+	0	ID=cds16;Parent=gene20;Dbxref=Genbank:WP_002213169.1;Name=WP_002213169.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_002213169.1;transl_table=11
NC_017154.1	RefSeq	gene	21805	22427	.	+	.	ID=gene21;Name=YPD4_RS00110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS00110;pseudo=true
NC_017154.1	Protein Homology	CDS	21805	22427	.	+	0	ID=cds17;Parent=gene21;exception=annotated by transcript or proteomic data;gbkey=CDS;product=protein disulfide isomerase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	22919	25717	.	+	.	ID=gene22;Name=YPD4_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00115;old_locus_tag=YPD4_0016
NC_017154.1	Protein Homology	CDS	22919	25717	.	+	0	ID=cds18;Parent=gene22;Dbxref=Genbank:WP_002213164.1;Name=WP_002213164.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_002213164.1;transl_table=11
NC_017154.1	RefSeq	gene	25969	26136	.	+	.	ID=gene23;Name=YPD4_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00120
NC_017154.1	Protein Homology	CDS	25969	26136	.	+	0	ID=cds19;Parent=gene23;Dbxref=Genbank:WP_044023320.1;Name=WP_044023320.1;gbkey=CDS;product=transposase;protein_id=WP_044023320.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	25972	26698	.	+	.	ID=id7;gbkey=repeat_region
NC_017154.1	RefSeq	gene	26126	26584	.	+	.	ID=gene24;Name=YPD4_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00125;old_locus_tag=YPD4_0017
NC_017154.1	Protein Homology	CDS	26126	26584	.	+	0	ID=cds20;Parent=gene24;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	26836	27486	.	-	.	ID=gene25;Name=YPD4_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00130;old_locus_tag=YPD4_0018
NC_017154.1	Protein Homology	CDS	26836	27486	.	-	0	ID=cds21;Parent=gene25;Dbxref=Genbank:WP_002213160.1;Name=WP_002213160.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002213160.1;transl_table=11
NC_017154.1	RefSeq	gene	28231	28797	.	+	.	ID=gene26;Name=YPD4_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00135;old_locus_tag=YPD4_0019
NC_017154.1	Protein Homology	CDS	28231	28797	.	+	0	ID=cds22;Parent=gene26;Dbxref=Genbank:WP_002213158.1;Name=WP_002213158.1;gbkey=CDS;product=der GTPase-activating protein YihI;protein_id=WP_002213158.1;transl_table=11
NC_017154.1	RefSeq	gene	28980	30353	.	+	.	ID=gene27;Name=YPD4_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00140;old_locus_tag=YPD4_0020
NC_017154.1	Protein Homology	CDS	28980	30353	.	+	0	ID=cds23;Parent=gene27;Dbxref=Genbank:WP_002213155.1;Name=WP_002213155.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002213155.1;transl_table=11
NC_017154.1	RefSeq	gene	30407	31819	.	-	.	ID=gene28;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=YPD4_RS00145;old_locus_tag=YPD4_0021
NC_017154.1	Protein Homology	CDS	30407	31819	.	-	0	ID=cds24;Parent=gene28;Dbxref=Genbank:WP_002213152.1;Name=WP_002213152.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_002213152.1;transl_table=11
NC_017154.1	RefSeq	gene	31827	32876	.	-	.	ID=gene29;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=YPD4_RS00150;old_locus_tag=YPD4_0022
NC_017154.1	Protein Homology	CDS	31827	32876	.	-	0	ID=cds25;Parent=gene29;Dbxref=Genbank:WP_002213151.1;Name=WP_002213151.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_002213151.1;transl_table=11
NC_017154.1	RefSeq	gene	33129	34538	.	-	.	ID=gene30;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=YPD4_RS00155;old_locus_tag=YPD4_0023
NC_017154.1	Protein Homology	CDS	33129	34538	.	-	0	ID=cds26;Parent=gene30;Dbxref=Genbank:WP_002213150.1;Name=WP_002213150.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_002213150.1;transl_table=11
NC_017154.1	RefSeq	gene	34724	34855	.	-	.	ID=gene31;Name=YPD4_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00160
NC_017154.1	Protein Homology	CDS	34724	34855	.	-	0	ID=cds27;Parent=gene31;Dbxref=Genbank:WP_002422228.1;Name=WP_002422228.1;gbkey=CDS;product=membrane protein;protein_id=WP_002422228.1;transl_table=11
NC_017154.1	RefSeq	gene	35100	36923	.	+	.	ID=gene32;Name=YPD4_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00165;old_locus_tag=YPD4_0024
NC_017154.1	Protein Homology	CDS	35100	36923	.	+	0	ID=cds28;Parent=gene32;Dbxref=Genbank:WP_002217380.1;Name=WP_002217380.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002217380.1;transl_table=11
NC_017154.1	RefSeq	gene	37245	37835	.	+	.	ID=gene33;Name=YPD4_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00170;old_locus_tag=YPD4_0025
NC_017154.1	Protein Homology	CDS	37245	37835	.	+	0	ID=cds29;Parent=gene33;Dbxref=Genbank:WP_002209011.1;Name=WP_002209011.1;gbkey=CDS;product=phosphatase;protein_id=WP_002209011.1;transl_table=11
NC_017154.1	RefSeq	gene	37932	38816	.	+	.	ID=gene34;Name=YPD4_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00175;old_locus_tag=YPD4_0026
NC_017154.1	Protein Homology	CDS	37932	38816	.	+	0	ID=cds30;Parent=gene34;Dbxref=Genbank:WP_002209010.1;Name=WP_002209010.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209010.1;transl_table=11
NC_017154.1	RefSeq	gene	38823	39260	.	+	.	ID=gene35;Name=YPD4_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00180;old_locus_tag=YPD4_0027
NC_017154.1	Protein Homology	CDS	38823	39260	.	+	0	ID=cds31;Parent=gene35;Dbxref=Genbank:WP_002209009.1;Name=WP_002209009.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	39266	41223	.	+	.	ID=id8;gbkey=repeat_region
NC_017154.1	RefSeq	gene	39334	40113	.	-	.	ID=gene36;Name=YPD4_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00185;old_locus_tag=YPD4_0028
NC_017154.1	Protein Homology	CDS	39334	40113	.	-	0	ID=cds32;Parent=gene36;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	40113	41135	.	-	.	ID=gene37;Name=YPD4_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00190;old_locus_tag=YPD4_0029
NC_017154.1	Protein Homology	CDS	40113	41135	.	-	0	ID=cds33;Parent=gene37;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	41405	42328	.	+	.	ID=gene38;Name=YPD4_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00195;old_locus_tag=YPD4_0030
NC_017154.1	Protein Homology	CDS	41405	42328	.	+	0	ID=cds34;Parent=gene38;Dbxref=Genbank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209008.1;transl_table=11
NC_017154.1	RefSeq	gene	42463	44172	.	-	.	ID=gene39;Name=YPD4_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00200;old_locus_tag=YPD4_0031
NC_017154.1	Protein Homology	CDS	42463	44172	.	-	0	ID=cds35;Parent=gene39;Dbxref=Genbank:WP_002209007.1;Name=WP_002209007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209007.1;transl_table=11
NC_017154.1	RefSeq	gene	44320	45706	.	-	.	ID=gene40;Name=YPD4_RS00205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS00205;pseudo=true
NC_017154.1	Protein Homology	CDS	44320	45706	.	-	0	ID=cds36;Parent=gene40;Note=high-affinity transporter for xanthine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=xanthine permease XanP;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	45944	47158	.	+	.	ID=gene41;Name=YPD4_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00210;old_locus_tag=YPD4_0034
NC_017154.1	Protein Homology	CDS	45944	47158	.	+	0	ID=cds37;Parent=gene41;Dbxref=Genbank:WP_002209005.1;Name=WP_002209005.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;product=sodium/glutamate symport carrier protein GltS;protein_id=WP_002209005.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	47256	47435	.	+	.	ID=id9;gbkey=repeat_region
NC_017154.1	RefSeq	gene	47524	49605	.	-	.	ID=gene42;Name=YPD4_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00215;old_locus_tag=YPD4_0035
NC_017154.1	Protein Homology	CDS	47524	49605	.	-	0	ID=cds38;Parent=gene42;Dbxref=Genbank:WP_002209004.1;Name=WP_002209004.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_002209004.1;transl_table=11
NC_017154.1	RefSeq	gene	49606	50265	.	-	.	ID=gene43;Name=YPD4_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00220;old_locus_tag=YPD4_0036
NC_017154.1	Protein Homology	CDS	49606	50265	.	-	0	ID=cds39;Parent=gene43;Dbxref=Genbank:WP_002361605.1;Name=WP_002361605.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA methyltransferase;protein_id=WP_002361605.1;transl_table=11
NC_017154.1	RefSeq	gene	50304	52412	.	-	.	ID=gene44;Name=YPD4_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00225;old_locus_tag=YPD4_0037
NC_017154.1	Protein Homology	CDS	50304	52412	.	-	0	ID=cds40;Parent=gene44;Dbxref=Genbank:WP_002209002.1;Name=WP_002209002.1;gbkey=CDS;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_002209002.1;transl_table=11
NC_017154.1	RefSeq	gene	52432	52707	.	-	.	ID=gene45;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=YPD4_RS00230
NC_017154.1	Protein Homology	CDS	52432	52707	.	-	0	ID=cds41;Parent=gene45;Dbxref=Genbank:WP_002209001.1;Name=WP_002209001.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_002209001.1;transl_table=11
NC_017154.1	RefSeq	gene	52762	53385	.	-	.	ID=gene46;Name=YPD4_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00235;old_locus_tag=YPD4_0038
NC_017154.1	Protein Homology	CDS	52762	53385	.	-	0	ID=cds42;Parent=gene46;Dbxref=Genbank:WP_002209000.1;Name=WP_002209000.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11
NC_017154.1	RefSeq	gene	53786	55489	.	+	.	ID=gene47;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=YPD4_RS00240;old_locus_tag=YPD4_0039
NC_017154.1	Protein Homology	CDS	53786	55489	.	+	0	ID=cds43;Parent=gene47;Dbxref=Genbank:WP_002215674.1;Name=WP_002215674.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;gbkey=CDS;gene=ligB;product=DNA ligase B;protein_id=WP_002215674.1;transl_table=11
NC_017154.1	RefSeq	gene	55502	56125	.	-	.	ID=gene48;Name=YPD4_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00245;old_locus_tag=YPD4_0040
NC_017154.1	Protein Homology	CDS	55502	56125	.	-	0	ID=cds44;Parent=gene48;Dbxref=Genbank:WP_002215676.1;Name=WP_002215676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215676.1;transl_table=11
NC_017154.1	RefSeq	gene	56528	57391	.	-	.	ID=gene49;Name=YPD4_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00250;old_locus_tag=YPD4_0041
NC_017154.1	Protein Homology	CDS	56528	57391	.	-	0	ID=cds45;Parent=gene49;Dbxref=Genbank:WP_002208998.1;Name=WP_002208998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208998.1;transl_table=11
NC_017154.1	RefSeq	gene	57518	58234	.	+	.	ID=gene50;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=YPD4_RS00255;old_locus_tag=YPD4_0042
NC_017154.1	Protein Homology	CDS	57518	58234	.	+	0	ID=cds46;Parent=gene50;Dbxref=Genbank:WP_002208997.1;Name=WP_002208997.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11
NC_017154.1	RefSeq	gene	58401	59048	.	+	.	ID=gene51;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=YPD4_RS00260;old_locus_tag=YPD4_0043
NC_017154.1	Protein Homology	CDS	58401	59048	.	+	0	ID=cds47;Parent=gene51;Dbxref=Genbank:WP_002208996.1;Name=WP_002208996.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_002208996.1;transl_table=11
NC_017154.1	RefSeq	gene	59183	59779	.	-	.	ID=gene52;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=YPD4_RS00265;old_locus_tag=YPD4_0044
NC_017154.1	Protein Homology	CDS	59183	59779	.	-	0	ID=cds48;Parent=gene52;Dbxref=Genbank:WP_002208995.1;Name=WP_002208995.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_002208995.1;transl_table=11
NC_017154.1	RefSeq	gene	59901	60359	.	-	.	ID=gene53;Name=YPD4_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00270;old_locus_tag=YPD4_0045
NC_017154.1	Protein Homology	CDS	59901	60359	.	-	0	ID=cds49;Parent=gene53;Dbxref=Genbank:WP_011566231.1;Name=WP_011566231.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_011566231.1;transl_table=11
NC_017154.1	RefSeq	gene	60337	61554	.	-	.	ID=gene54;Name=YPD4_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00275;old_locus_tag=YPD4_0046
NC_017154.1	Protein Homology	CDS	60337	61554	.	-	0	ID=cds50;Parent=gene54;Dbxref=Genbank:WP_002208993.1;Name=WP_002208993.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_002208993.1;transl_table=11
NC_017154.1	RefSeq	gene	61748	62416	.	+	.	ID=gene55;Name=YPD4_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00280;old_locus_tag=YPD4_0047
NC_017154.1	Protein Homology	CDS	61748	62416	.	+	0	ID=cds51;Parent=gene55;Dbxref=Genbank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_002208992.1;transl_table=11
NC_017154.1	RefSeq	gene	62679	62915	.	+	.	ID=gene56;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=YPD4_RS00285
NC_017154.1	Protein Homology	CDS	62679	62915	.	+	0	ID=cds52;Parent=gene56;Dbxref=Genbank:WP_002208991.1;Name=WP_002208991.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11
NC_017154.1	RefSeq	gene	62927	63094	.	+	.	ID=gene57;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=YPD4_RS00290
NC_017154.1	Protein Homology	CDS	62927	63094	.	+	0	ID=cds53;Parent=gene57;Dbxref=Genbank:WP_002208990.1;Name=WP_002208990.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11
NC_017154.1	RefSeq	gene	63177	63986	.	+	.	ID=gene58;Name=YPD4_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00295;old_locus_tag=YPD4_0048
NC_017154.1	Protein Homology	CDS	63177	63986	.	+	0	ID=cds54;Parent=gene58;Dbxref=Genbank:WP_002208989.1;Name=WP_002208989.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_002208989.1;transl_table=11
NC_017154.1	RefSeq	gene	63992	64471	.	-	.	ID=gene59;Name=YPD4_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00300;old_locus_tag=YPD4_0049
NC_017154.1	Protein Homology	CDS	63992	64471	.	-	0	ID=cds55;Parent=gene59;Dbxref=Genbank:WP_002208988.1;Name=WP_002208988.1;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=WP_002208988.1;transl_table=11
NC_017154.1	RefSeq	gene	64468	65250	.	-	.	ID=gene60;Name=YPD4_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00305;old_locus_tag=YPD4_0050
NC_017154.1	Protein Homology	CDS	64468	65250	.	-	0	ID=cds56;Parent=gene60;Dbxref=Genbank:WP_002208987.1;Name=WP_002208987.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208987.1;transl_table=11
NC_017154.1	RefSeq	gene	65251	66528	.	-	.	ID=gene61;Name=YPD4_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00310;old_locus_tag=YPD4_0051
NC_017154.1	Protein Homology	CDS	65251	66528	.	-	0	ID=cds57;Parent=gene61;Dbxref=Genbank:WP_002208986.1;Name=WP_002208986.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002208986.1;transl_table=11
NC_017154.1	RefSeq	gene	66948	67913	.	-	.	ID=gene62;Name=YPD4_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00315;old_locus_tag=YPD4_0052
NC_017154.1	Protein Homology	CDS	66948	67913	.	-	0	ID=cds58;Parent=gene62;Dbxref=Genbank:WP_002208985.1;Name=WP_002208985.1;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208985.1;transl_table=11
NC_017154.1	RefSeq	gene	67913	68977	.	-	.	ID=gene63;Name=YPD4_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00320;old_locus_tag=YPD4_0053
NC_017154.1	Protein Homology	CDS	67913	68977	.	-	0	ID=cds59;Parent=gene63;Dbxref=Genbank:WP_002208984.1;Name=WP_002208984.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208984.1;transl_table=11
NC_017154.1	RefSeq	gene	69008	69940	.	-	.	ID=gene64;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=YPD4_RS00325;old_locus_tag=YPD4_0054
NC_017154.1	Protein Homology	CDS	69008	69940	.	-	0	ID=cds60;Parent=gene64;Dbxref=Genbank:WP_002208983.1;Name=WP_002208983.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_002208983.1;transl_table=11
NC_017154.1	RefSeq	gene	70186	71397	.	+	.	ID=gene65;Name=YPD4_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00330;old_locus_tag=YPD4_0055
NC_017154.1	Protein Homology	CDS	70186	71397	.	+	0	ID=cds61;Parent=gene65;Dbxref=Genbank:WP_002208982.1;Name=WP_002208982.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=WP_002208982.1;transl_table=11
NC_017154.1	RefSeq	gene	71407	72432	.	+	.	ID=gene66;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=YPD4_RS00335;old_locus_tag=YPD4_0056
NC_017154.1	Protein Homology	CDS	71407	72432	.	+	0	ID=cds62;Parent=gene66;Dbxref=Genbank:WP_002208981.1;Name=WP_002208981.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=WP_002208981.1;transl_table=11
NC_017154.1	RefSeq	gene	72570	73504	.	-	.	ID=gene67;Name=YPD4_RS00340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS00340;pseudo=true
NC_017154.1	Protein Homology	CDS	72570	73504	.	-	0	ID=cds63;Parent=gene67;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar deacetylase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	73528	74898	.	-	.	ID=gene68;Name=YPD4_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00345;old_locus_tag=YPD4_0059
NC_017154.1	Protein Homology	CDS	73528	74898	.	-	0	ID=cds64;Parent=gene68;Dbxref=Genbank:WP_002208980.1;Name=WP_002208980.1;gbkey=CDS;product=peptidase M37;protein_id=WP_002208980.1;transl_table=11
NC_017154.1	RefSeq	gene	74908	76455	.	-	.	ID=gene69;Name=YPD4_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00350;old_locus_tag=YPD4_0060
NC_017154.1	Protein Homology	CDS	74908	76455	.	-	0	ID=cds65;Parent=gene69;Dbxref=Genbank:WP_002208979.1;Name=WP_002208979.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_002208979.1;transl_table=11
NC_017154.1	RefSeq	gene	76852	77286	.	+	.	ID=gene70;Name=YPD4_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00355;old_locus_tag=YPD4_0061
NC_017154.1	Protein Homology	CDS	76852	77286	.	+	0	ID=cds66;Parent=gene70;Dbxref=Genbank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208978.1;transl_table=11
NC_017154.1	RefSeq	gene	77405	77653	.	+	.	ID=gene71;Name=YPD4_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00360
NC_017154.1	Protein Homology	CDS	77405	77653	.	+	0	ID=cds67;Parent=gene71;Dbxref=Genbank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208977.1;transl_table=11
NC_017154.1	RefSeq	gene	77741	78217	.	+	.	ID=gene72;Name=YPD4_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00365;old_locus_tag=YPD4_0062
NC_017154.1	Protein Homology	CDS	77741	78217	.	+	0	ID=cds68;Parent=gene72;Dbxref=Genbank:WP_002208976.1;Name=WP_002208976.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=protein-export protein SecB;protein_id=WP_002208976.1;transl_table=11
NC_017154.1	RefSeq	gene	78217	79236	.	+	.	ID=gene73;Name=YPD4_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00370;old_locus_tag=YPD4_0063
NC_017154.1	Protein Homology	CDS	78217	79236	.	+	0	ID=cds69;Parent=gene73;Dbxref=Genbank:WP_002208975.1;Name=WP_002208975.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=WP_002208975.1;transl_table=11
NC_017154.1	RefSeq	gene	79296	79436	.	+	.	ID=gene74;Name=YPD4_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00375
NC_017154.1	Protein Homology	CDS	79296	79436	.	+	0	ID=cds70;Parent=gene74;Dbxref=Genbank:WP_002228146.1;Name=WP_002228146.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228146.1;transl_table=11
NC_017154.1	RefSeq	gene	79502	80323	.	+	.	ID=gene75;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=YPD4_RS00380;old_locus_tag=YPD4_0064
NC_017154.1	Protein Homology	CDS	79502	80323	.	+	0	ID=cds71;Parent=gene75;Dbxref=Genbank:WP_002208974.1;Name=WP_002208974.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_002208974.1;transl_table=11
NC_017154.1	RefSeq	gene	80446	80934	.	-	.	ID=gene76;Name=YPD4_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00385;old_locus_tag=YPD4_0065
NC_017154.1	Protein Homology	CDS	80446	80934	.	-	0	ID=cds72;Parent=gene76;Dbxref=Genbank:WP_002208973.1;Name=WP_002208973.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_002208973.1;transl_table=11
NC_017154.1	RefSeq	gene	81123	82187	.	+	.	ID=gene77;Name=YPD4_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00390;old_locus_tag=YPD4_0066
NC_017154.1	Protein Homology	CDS	81123	82187	.	+	0	ID=cds73;Parent=gene77;Dbxref=Genbank:WP_002208972.1;Name=WP_002208972.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;product=O6-methylguanine-DNA methyltransferase;protein_id=WP_002208972.1;transl_table=11
NC_017154.1	RefSeq	gene	82236	83612	.	-	.	ID=gene78;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=YPD4_RS00395;old_locus_tag=YPD4_0067
NC_017154.1	Protein Homology	CDS	82236	83612	.	-	0	ID=cds74;Parent=gene78;Dbxref=Genbank:WP_014462183.1;Name=WP_014462183.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_014462183.1;transl_table=11
NC_017154.1	RefSeq	gene	83609	84307	.	-	.	ID=gene79;Name=YPD4_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00400;old_locus_tag=YPD4_0068
NC_017154.1	Protein Homology	CDS	83609	84307	.	-	0	ID=cds75;Parent=gene79;Dbxref=Genbank:WP_002208970.1;Name=WP_002208970.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208970.1;transl_table=11
NC_017154.1	RefSeq	gene	84481	84969	.	+	.	ID=gene80;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=YPD4_RS00405;old_locus_tag=YPD4_0069
NC_017154.1	Protein Homology	CDS	84481	84969	.	+	0	ID=cds76;Parent=gene80;Dbxref=Genbank:WP_002208969.1;Name=WP_002208969.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=universal stress protein;protein_id=WP_002208969.1;transl_table=11
NC_017154.1	RefSeq	gene	85647	86606	.	+	.	ID=gene81;Name=YPD4_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00410;old_locus_tag=YPD4_0070
NC_017154.1	Protein Homology	CDS	85647	86606	.	+	0	ID=cds77;Parent=gene81;Dbxref=Genbank:WP_002208968.1;Name=WP_002208968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208968.1;transl_table=11
NC_017154.1	RefSeq	gene	87168	88070	.	+	.	ID=gene82;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=YPD4_RS00415;old_locus_tag=YPD4_0071
NC_017154.1	Protein Homology	CDS	87168	88070	.	+	0	ID=cds78;Parent=gene82;Dbxref=Genbank:WP_002208967.1;Name=WP_002208967.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;gbkey=CDS;gene=fieF;product=cation-efflux pump FieF;protein_id=WP_002208967.1;transl_table=11
NC_017154.1	RefSeq	gene	88288	89271	.	+	.	ID=gene83;Name=YPD4_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00420;old_locus_tag=YPD4_0072
NC_017154.1	Protein Homology	CDS	88288	89271	.	+	0	ID=cds79;Parent=gene83;Dbxref=Genbank:WP_002208966.1;Name=WP_002208966.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_002208966.1;transl_table=11
NC_017154.1	RefSeq	gene	89492	90481	.	+	.	ID=gene84;Name=YPD4_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00425;old_locus_tag=YPD4_0073
NC_017154.1	Protein Homology	CDS	89492	90481	.	+	0	ID=cds80;Parent=gene84;Dbxref=Genbank:WP_002208965.1;Name=WP_002208965.1;gbkey=CDS;product=sulfate transporter subunit;protein_id=WP_002208965.1;transl_table=11
NC_017154.1	RefSeq	gene	90731	91390	.	-	.	ID=gene85;Name=YPD4_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00430;old_locus_tag=YPD4_0074
NC_017154.1	Protein Homology	CDS	90731	91390	.	-	0	ID=cds81;Parent=gene85;Dbxref=Genbank:WP_025473238.1;Name=WP_025473238.1;gbkey=CDS;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_025473238.1;transl_table=11
NC_017154.1	RefSeq	gene	91625	93052	.	-	.	ID=gene86;Name=YPD4_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00435;old_locus_tag=YPD4_0075
NC_017154.1	Protein Homology	CDS	91625	93052	.	-	0	ID=cds82;Parent=gene86;Dbxref=Genbank:WP_002208963.1;Name=WP_002208963.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208963.1;transl_table=11
NC_017154.1	RefSeq	gene	93118	93831	.	-	.	ID=gene87;Name=YPD4_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00440;old_locus_tag=YPD4_0076
NC_017154.1	Protein Homology	CDS	93118	93831	.	-	0	ID=cds83;Parent=gene87;Dbxref=Genbank:WP_002208962.1;Name=WP_002208962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208962.1;transl_table=11
NC_017154.1	RefSeq	gene	93828	94565	.	-	.	ID=gene88;Name=YPD4_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00445;old_locus_tag=YPD4_0077
NC_017154.1	Protein Homology	CDS	93828	94565	.	-	0	ID=cds84;Parent=gene88;Dbxref=Genbank:WP_002208961.1;Name=WP_002208961.1;gbkey=CDS;product=GlcNAc-PI de-N-acetylase;protein_id=WP_002208961.1;transl_table=11
NC_017154.1	RefSeq	gene	94702	95937	.	+	.	ID=gene89;Name=YPD4_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00450;old_locus_tag=YPD4_0078
NC_017154.1	Protein Homology	CDS	94702	95937	.	+	0	ID=cds85;Parent=gene89;Dbxref=Genbank:WP_002208960.1;Name=WP_002208960.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208960.1;transl_table=11
NC_017154.1	RefSeq	gene	96169	96936	.	-	.	ID=gene90;Name=YPD4_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00455;old_locus_tag=YPD4_0079
NC_017154.1	Protein Homology	CDS	96169	96936	.	-	0	ID=cds86;Parent=gene90;Dbxref=Genbank:WP_002208959.1;Name=WP_002208959.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_002208959.1;transl_table=11
NC_017154.1	RefSeq	gene	97065	97700	.	-	.	ID=gene91;Name=YPD4_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00460;old_locus_tag=YPD4_0080
NC_017154.1	Protein Homology	CDS	97065	97700	.	-	0	ID=cds87;Parent=gene91;Dbxref=Genbank:WP_002215864.1;Name=WP_002215864.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215864.1;transl_table=11
NC_017154.1	RefSeq	gene	97848	98282	.	+	.	ID=gene92;Name=YPD4_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00465;old_locus_tag=YPD4_0081
NC_017154.1	Protein Homology	CDS	97848	98282	.	+	0	ID=cds88;Parent=gene92;Dbxref=Genbank:WP_002208957.1;Name=WP_002208957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208957.1;transl_table=11
NC_017154.1	RefSeq	gene	98623	99369	.	-	.	ID=gene93;Name=YPD4_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00470;old_locus_tag=YPD4_0082
NC_017154.1	Protein Homology	CDS	98623	99369	.	-	0	ID=cds89;Parent=gene93;Dbxref=Genbank:WP_002208956.1;Name=WP_002208956.1;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=WP_002208956.1;transl_table=11
NC_017154.1	RefSeq	gene	99524	100534	.	-	.	ID=gene94;Name=YPD4_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00475;old_locus_tag=YPD4_0083
NC_017154.1	Protein Homology	CDS	99524	100534	.	-	0	ID=cds90;Parent=gene94;Dbxref=Genbank:WP_002223912.1;Name=WP_002223912.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002223912.1;transl_table=11
NC_017154.1	RefSeq	gene	100771	102294	.	-	.	ID=gene95;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=YPD4_RS00480;old_locus_tag=YPD4_0084
NC_017154.1	Protein Homology	CDS	100771	102294	.	-	0	ID=cds91;Parent=gene95;Dbxref=Genbank:WP_002218876.1;Name=WP_002218876.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=WP_002218876.1;transl_table=11
NC_017154.1	RefSeq	gene	102471	103319	.	-	.	ID=gene96;Name=YPD4_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00485;old_locus_tag=YPD4_0085
NC_017154.1	Protein Homology	CDS	102471	103319	.	-	0	ID=cds92;Parent=gene96;Dbxref=Genbank:WP_002208954.1;Name=WP_002208954.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=WP_002208954.1;transl_table=11
NC_017154.1	RefSeq	gene	103329	103568	.	-	.	ID=gene97;Name=YPD4_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00490
NC_017154.1	Protein Homology	CDS	103329	103568	.	-	0	ID=cds93;Parent=gene97;Dbxref=Genbank:WP_002215868.1;Name=WP_002215868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215868.1;transl_table=11
NC_017154.1	RefSeq	gene	103947	104186	.	+	.	ID=gene98;Name=YPD4_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00495
NC_017154.1	Protein Homology	CDS	103947	104186	.	+	0	ID=cds94;Parent=gene98;Dbxref=Genbank:WP_002208953.1;Name=WP_002208953.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=cell division protein ZapB;protein_id=WP_002208953.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	104280	104998	.	+	.	ID=id10;gbkey=repeat_region
NC_017154.1	RefSeq	gene	104394	104852	.	-	.	ID=gene99;Name=YPD4_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00500;old_locus_tag=YPD4_0086
NC_017154.1	Protein Homology	CDS	104394	104852	.	-	0	ID=cds95;Parent=gene99;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	105237	107351	.	-	.	ID=gene100;Name=YPD4_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00505;old_locus_tag=YPD4_0087
NC_017154.1	Protein Homology	CDS	105237	107351	.	-	0	ID=cds96;Parent=gene100;Dbxref=Genbank:WP_002218877.1;Name=WP_002218877.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002218877.1;transl_table=11
NC_017154.1	RefSeq	gene	107344	108636	.	-	.	ID=gene101;Name=YPD4_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00510;old_locus_tag=YPD4_0088
NC_017154.1	Protein Homology	CDS	107344	108636	.	-	0	ID=cds97;Parent=gene101;Dbxref=Genbank:WP_002208949.1;Name=WP_002208949.1;gbkey=CDS;product=colicin V secretion protein CvaA;protein_id=WP_002208949.1;transl_table=11
NC_017154.1	RefSeq	gene	108849	109088	.	+	.	ID=gene102;Name=YPD4_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00515
NC_017154.1	Protein Homology	CDS	108849	109088	.	+	0	ID=cds98;Parent=gene102;Dbxref=Genbank:WP_002215873.1;Name=WP_002215873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215873.1;transl_table=11
NC_017154.1	RefSeq	gene	109263	109412	.	+	.	ID=gene103;Name=YPD4_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00520
NC_017154.1	Protein Homology	CDS	109263	109412	.	+	0	ID=cds99;Parent=gene103;Dbxref=Genbank:WP_002208947.1;Name=WP_002208947.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208947.1;transl_table=11
NC_017154.1	RefSeq	gene	109718	110302	.	+	.	ID=gene104;Name=YPD4_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00525;old_locus_tag=YPD4_0089
NC_017154.1	Protein Homology	CDS	109718	110302	.	+	0	ID=cds100;Parent=gene104;Dbxref=Genbank:WP_002228141.1;Name=WP_002228141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228141.1;transl_table=11
NC_017154.1	RefSeq	gene	110419	110904	.	-	.	ID=gene105;Name=YPD4_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00530;old_locus_tag=YPD4_0090
NC_017154.1	Protein Homology	CDS	110419	110904	.	-	0	ID=cds101;Parent=gene105;Dbxref=Genbank:WP_002208945.1;Name=WP_002208945.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;product=regulator of ribonuclease activity A;protein_id=WP_002208945.1;transl_table=11
NC_017154.1	RefSeq	gene	111046	111963	.	-	.	ID=gene106;Name=YPD4_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00535;old_locus_tag=YPD4_0091
NC_017154.1	Protein Homology	CDS	111046	111963	.	-	0	ID=cds102;Parent=gene106;Dbxref=Genbank:WP_002208944.1;Name=WP_002208944.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_002208944.1;transl_table=11
NC_017154.1	RefSeq	gene	112199	113530	.	-	.	ID=gene107;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=YPD4_RS00540;old_locus_tag=YPD4_0092
NC_017154.1	Protein Homology	CDS	112199	113530	.	-	0	ID=cds103;Parent=gene107;Dbxref=Genbank:WP_002208943.1;Name=WP_002208943.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_002208943.1;transl_table=11
NC_017154.1	RefSeq	gene	113601	114125	.	-	.	ID=gene108;Name=YPD4_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00545;old_locus_tag=YPD4_0093
NC_017154.1	Protein Homology	CDS	113601	114125	.	-	0	ID=cds104;Parent=gene108;Dbxref=Genbank:WP_002208942.1;Name=WP_002208942.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11
NC_017154.1	RefSeq	gene	114225	115070	.	-	.	ID=gene109;Name=YPD4_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00550;old_locus_tag=YPD4_0094
NC_017154.1	Protein Homology	CDS	114225	115070	.	-	0	ID=cds105;Parent=gene109;Dbxref=Genbank:WP_002208941.1;Name=WP_002208941.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_002208941.1;transl_table=11
NC_017154.1	RefSeq	gene	115136	116164	.	-	.	ID=gene110;Name=YPD4_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00555;old_locus_tag=YPD4_0095
NC_017154.1	Protein Homology	CDS	115136	116164	.	-	0	ID=cds106;Parent=gene110;Dbxref=Genbank:WP_002216730.1;Name=WP_002216730.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216730.1;transl_table=11
NC_017154.1	RefSeq	gene	116287	116430	.	-	.	ID=gene111;Name=YPD4_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00560
NC_017154.1	Protein Homology	CDS	116287	116430	.	-	0	ID=cds107;Parent=gene111;Dbxref=Genbank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002216732.1;transl_table=11
NC_017154.1	RefSeq	gene	116517	118715	.	-	.	ID=gene112;Name=YPD4_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00565;old_locus_tag=YPD4_0096
NC_017154.1	Protein Homology	CDS	116517	118715	.	-	0	ID=cds108;Parent=gene112;Dbxref=Genbank:WP_002208938.1;Name=WP_002208938.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002208938.1;transl_table=11
NC_017154.1	RefSeq	gene	118958	119173	.	+	.	ID=gene113;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=YPD4_RS00570
NC_017154.1	Protein Homology	CDS	118958	119173	.	+	0	ID=cds109;Parent=gene113;Dbxref=Genbank:WP_002216737.1;Name=WP_002216737.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11
NC_017154.1	RefSeq	gene	119716	120171	.	-	.	ID=gene114;Name=YPD4_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00575;old_locus_tag=YPD4_0097
NC_017154.1	Protein Homology	CDS	119716	120171	.	-	0	ID=cds110;Parent=gene114;Dbxref=Genbank:WP_002208936.1;Name=WP_002208936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208936.1;transl_table=11
NC_017154.1	RefSeq	gene	120222	120383	.	+	.	ID=gene115;Name=YPD4_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00580
NC_017154.1	Protein Homology	CDS	120222	120383	.	+	0	ID=cds111;Parent=gene115;Dbxref=Genbank:WP_002216739.1;Name=WP_002216739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216739.1;transl_table=11
NC_017154.1	RefSeq	gene	120520	120837	.	-	.	ID=gene116;Name=YPD4_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00585;old_locus_tag=YPD4_0098
NC_017154.1	Protein Homology	CDS	120520	120837	.	-	0	ID=cds112;Parent=gene116;Dbxref=Genbank:WP_002208935.1;Name=WP_002208935.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_002208935.1;transl_table=11
NC_017154.1	RefSeq	gene	121215	122374	.	+	.	ID=gene117;Name=YPD4_RS00590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS00590;old_locus_tag=YPD4_0099;pseudo=true
NC_017154.1	Protein Homology	CDS	121215	122374	.	+	0	ID=cds113;Parent=gene117;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cystathionine gamma-synthase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	122377	124812	.	+	.	ID=gene118;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=YPD4_RS00595;old_locus_tag=YPD4_0100
NC_017154.1	Protein Homology	CDS	122377	124812	.	+	0	ID=cds114;Parent=gene118;Dbxref=Genbank:WP_002208934.1;Name=WP_002208934.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11
NC_017154.1	RefSeq	gene	125045	125938	.	+	.	ID=gene119;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=YPD4_RS00600;old_locus_tag=YPD4_0101
NC_017154.1	Protein Homology	CDS	125045	125938	.	+	0	ID=cds115;Parent=gene119;Dbxref=Genbank:WP_014462184.1;Name=WP_014462184.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=WP_014462184.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	125963	127591	.	+	.	ID=id11;gbkey=repeat_region
NC_017154.1	RefSeq	gene	126100	126885	.	-	.	ID=gene120;Name=YPD4_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00605;old_locus_tag=YPD4_0102
NC_017154.1	Protein Homology	CDS	126100	126885	.	-	0	ID=cds116;Parent=gene120;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11
NC_017154.1	RefSeq	gene	126939	127106	.	-	.	ID=gene121;Name=YPD4_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00610
NC_017154.1	Protein Homology	CDS	126939	127106	.	-	0	ID=cds117;Parent=gene121;Dbxref=Genbank:WP_002353484.1;Name=WP_002353484.1;gbkey=CDS;product=transposase;protein_id=WP_002353484.1;transl_table=11
NC_017154.1	RefSeq	gene	127646	128404	.	-	.	ID=gene122;Name=YPD4_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00615;old_locus_tag=YPD4_0104
NC_017154.1	Protein Homology	CDS	127646	128404	.	-	0	ID=cds118;Parent=gene122;Dbxref=Genbank:WP_002208930.1;Name=WP_002208930.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208930.1;transl_table=11
NC_017154.1	RefSeq	gene	128439	129275	.	-	.	ID=gene123;Name=YPD4_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00620;old_locus_tag=YPD4_0105
NC_017154.1	Protein Homology	CDS	128439	129275	.	-	0	ID=cds119;Parent=gene123;Dbxref=Genbank:WP_002216348.1;Name=WP_002216348.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=rhomboid protease GlpG;protein_id=WP_002216348.1;transl_table=11
NC_017154.1	RefSeq	gene	129293	129622	.	-	.	ID=gene124;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=YPD4_RS00625
NC_017154.1	Protein Homology	CDS	129293	129622	.	-	0	ID=cds120;Parent=gene124;Dbxref=Genbank:WP_002208928.1;Name=WP_002208928.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002208928.1;transl_table=11
NC_017154.1	RefSeq	gene	129997	132708	.	-	.	ID=gene125;Name=YPD4_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00630;old_locus_tag=YPD4_0107
NC_017154.1	Protein Homology	CDS	129997	132708	.	-	0	ID=cds121;Parent=gene125;Dbxref=Genbank:WP_002208926.1;Name=WP_002208926.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208926.1;transl_table=11
NC_017154.1	RefSeq	gene	133026	133376	.	+	.	ID=gene126;Name=YPD4_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00635;old_locus_tag=YPD4_0108
NC_017154.1	GeneMarkS+	CDS	133026	133376	.	+	0	ID=cds122;Parent=gene126;Dbxref=Genbank:WP_002215922.1;Name=WP_002215922.1;gbkey=CDS;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_002215922.1;transl_table=11
NC_017154.1	RefSeq	gene	133406	135430	.	+	.	ID=gene127;Name=YPD4_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00640;old_locus_tag=YPD4_0109
NC_017154.1	Protein Homology	CDS	133406	135430	.	+	0	ID=cds123;Parent=gene127;Dbxref=Genbank:WP_002430067.1;Name=WP_002430067.1;gbkey=CDS;product=maltodextrin phosphorylase;protein_id=WP_002430067.1;transl_table=11
NC_017154.1	RefSeq	gene	135443	137539	.	+	.	ID=gene128;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=YPD4_RS00645;old_locus_tag=YPD4_0110
NC_017154.1	Protein Homology	CDS	135443	137539	.	+	0	ID=cds124;Parent=gene128;Dbxref=Genbank:WP_002208925.1;Name=WP_002208925.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11
NC_017154.1	RefSeq	gene	137868	138443	.	-	.	ID=gene129;Name=YPD4_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00650;old_locus_tag=YPD4_0111
NC_017154.1	Protein Homology	CDS	137868	138443	.	-	0	ID=cds125;Parent=gene129;Dbxref=Genbank:WP_002208924.1;Name=WP_002208924.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_002208924.1;transl_table=11
NC_017154.1	RefSeq	gene	138503	139204	.	-	.	ID=gene130;Name=YPD4_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00655;old_locus_tag=YPD4_0112
NC_017154.1	Protein Homology	CDS	138503	139204	.	-	0	ID=cds126;Parent=gene130;Dbxref=Genbank:WP_002208923.1;Name=WP_002208923.1;gbkey=CDS;product=competence protein ComF;protein_id=WP_002208923.1;transl_table=11
NC_017154.1	RefSeq	gene	139291	140067	.	+	.	ID=gene131;Name=YPD4_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00660;old_locus_tag=YPD4_0113
NC_017154.1	Protein Homology	CDS	139291	140067	.	+	0	ID=cds127;Parent=gene131;Dbxref=Genbank:WP_002208922.1;Name=WP_002208922.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_002208922.1;transl_table=11
NC_017154.1	RefSeq	gene	140237	140506	.	+	.	ID=gene132;Name=YPD4_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00665
NC_017154.1	Protein Homology	CDS	140237	140506	.	+	0	ID=cds128;Parent=gene132;Dbxref=Genbank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208921.1;transl_table=11
NC_017154.1	RefSeq	gene	140644	140901	.	-	.	ID=gene133;Name=YPD4_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00670
NC_017154.1	Protein Homology	CDS	140644	140901	.	-	0	ID=cds129;Parent=gene133;Dbxref=Genbank:WP_002208920.1;Name=WP_002208920.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;product=ferrous iron transporter C;protein_id=WP_002208920.1;transl_table=11
NC_017154.1	RefSeq	gene	140937	143252	.	-	.	ID=gene134;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=YPD4_RS00675;old_locus_tag=YPD4_0114
NC_017154.1	Protein Homology	CDS	140937	143252	.	-	0	ID=cds130;Parent=gene134;Dbxref=Genbank:WP_002208919.1;Name=WP_002208919.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=iron transporter;protein_id=WP_002208919.1;transl_table=11
NC_017154.1	RefSeq	gene	143344	143571	.	-	.	ID=gene135;Name=YPD4_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00680
NC_017154.1	Protein Homology	CDS	143344	143571	.	-	0	ID=cds131;Parent=gene135;Dbxref=Genbank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;product=iron transporter;protein_id=WP_002208918.1;transl_table=11
NC_017154.1	RefSeq	gene	143566	143712	.	+	.	ID=gene136;Name=YPD4_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00685
NC_017154.1	Protein Homology	CDS	143566	143712	.	+	0	ID=cds132;Parent=gene136;Dbxref=Genbank:WP_002215925.1;Name=WP_002215925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215925.1;transl_table=11
NC_017154.1	RefSeq	gene	144095	146470	.	-	.	ID=gene137;Name=YPD4_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00690;old_locus_tag=YPD4_0115
NC_017154.1	Protein Homology	CDS	144095	146470	.	-	0	ID=cds133;Parent=gene137;Dbxref=Genbank:WP_002208916.1;Name=WP_002208916.1;gbkey=CDS;product=transcription accessory protein;protein_id=WP_002208916.1;transl_table=11
NC_017154.1	RefSeq	gene	147004	147519	.	+	.	ID=gene138;Name=YPD4_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00695;old_locus_tag=YPD4_0116
NC_017154.1	Protein Homology	CDS	147004	147519	.	+	0	ID=cds134;Parent=gene138;Dbxref=Genbank:WP_002208915.1;Name=WP_002208915.1;gbkey=CDS;product=transcription elongation factor GreB;protein_id=WP_002208915.1;transl_table=11
NC_017154.1	RefSeq	gene	147655	148374	.	+	.	ID=gene139;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=YPD4_RS00700;old_locus_tag=YPD4_0117
NC_017154.1	Protein Homology	CDS	147655	148374	.	+	0	ID=cds135;Parent=gene139;Dbxref=Genbank:WP_002208914.1;Name=WP_002208914.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_002208914.1;transl_table=11
NC_017154.1	RefSeq	gene	148371	149723	.	+	.	ID=gene140;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=YPD4_RS00705;old_locus_tag=YPD4_0118
NC_017154.1	Protein Homology	CDS	148371	149723	.	+	0	ID=cds136;Parent=gene140;Dbxref=Genbank:WP_002208913.1;Name=WP_002208913.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_002208913.1;transl_table=11
NC_017154.1	RefSeq	gene	149858	151477	.	-	.	ID=gene141;Name=YPD4_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00710;old_locus_tag=YPD4_0119
NC_017154.1	Protein Homology	CDS	149858	151477	.	-	0	ID=cds137;Parent=gene141;Dbxref=Genbank:WP_002208912.1;Name=WP_002208912.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=WP_002208912.1;transl_table=11
NC_017154.1	RefSeq	gene	151674	152555	.	-	.	ID=gene142;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=YPD4_RS00715;old_locus_tag=YPD4_0120
NC_017154.1	Protein Homology	CDS	151674	152555	.	-	0	ID=cds138;Parent=gene142;Dbxref=Genbank:WP_002208911.1;Name=WP_002208911.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=molecular chaperone Hsp33;protein_id=WP_002208911.1;transl_table=11
NC_017154.1	RefSeq	gene	152718	153125	.	-	.	ID=gene143;Name=YPD4_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00720;old_locus_tag=YPD4_0121
NC_017154.1	Protein Homology	CDS	152718	153125	.	-	0	ID=cds139;Parent=gene143;Dbxref=Genbank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;product=heat-shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11
NC_017154.1	RefSeq	gene	153154	153834	.	-	.	ID=gene144;Name=YPD4_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00725;old_locus_tag=YPD4_0122
NC_017154.1	Protein Homology	CDS	153154	153834	.	-	0	ID=cds140;Parent=gene144;Dbxref=Genbank:WP_014462187.1;Name=WP_014462187.1;gbkey=CDS;product=nucleotidase;protein_id=WP_014462187.1;transl_table=11
NC_017154.1	RefSeq	gene	153978	156125	.	-	.	ID=gene145;Name=YPD4_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00730;old_locus_tag=YPD4_0123
NC_017154.1	Protein Homology	CDS	153978	156125	.	-	0	ID=cds141;Parent=gene145;Dbxref=Genbank:WP_002208908.1;Name=WP_002208908.1;gbkey=CDS;product=intracellular growth attenuator protein IgaA;protein_id=WP_002208908.1;transl_table=11
NC_017154.1	RefSeq	gene	156405	156599	.	+	.	ID=gene146;Name=YPD4_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00735
NC_017154.1	Protein Homology	CDS	156405	156599	.	+	0	ID=cds142;Parent=gene146;Dbxref=Genbank:WP_002216768.1;Name=WP_002216768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216768.1;transl_table=11
NC_017154.1	RefSeq	gene	156712	157257	.	+	.	ID=gene147;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=YPD4_RS00740;old_locus_tag=YPD4_0124
NC_017154.1	Protein Homology	CDS	156712	157257	.	+	0	ID=cds143;Parent=gene147;Dbxref=Genbank:WP_002208907.1;Name=WP_002208907.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase;protein_id=WP_002208907.1;transl_table=11
NC_017154.1	RefSeq	gene	157393	159948	.	-	.	ID=gene148;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=YPD4_RS00745;old_locus_tag=YPD4_0125
NC_017154.1	Protein Homology	CDS	157393	159948	.	-	0	ID=cds144;Parent=gene148;Dbxref=Genbank:WP_002208906.1;Name=WP_002208906.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=WP_002208906.1;transl_table=11
NC_017154.1	RefSeq	gene	160068	160964	.	+	.	ID=gene149;Name=YPD4_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00750;old_locus_tag=YPD4_0126
NC_017154.1	Protein Homology	CDS	160068	160964	.	+	0	ID=cds145;Parent=gene149;Dbxref=Genbank:WP_002208905.1;Name=WP_002208905.1;gbkey=CDS;product=pilus assembly protein HofM;protein_id=WP_002208905.1;transl_table=11
NC_017154.1	RefSeq	gene	160964	161569	.	+	.	ID=gene150;Name=YPD4_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00755;old_locus_tag=YPD4_0127
NC_017154.1	Protein Homology	CDS	160964	161569	.	+	0	ID=cds146;Parent=gene150;Dbxref=Genbank:WP_002208904.1;Name=WP_002208904.1;gbkey=CDS;product=pilus assembly protein PilN;protein_id=WP_002208904.1;transl_table=11
NC_017154.1	RefSeq	gene	161562	162143	.	+	.	ID=gene151;Name=YPD4_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00760;old_locus_tag=YPD4_0128
NC_017154.1	Protein Homology	CDS	161562	162143	.	+	0	ID=cds147;Parent=gene151;Dbxref=Genbank:WP_002217890.1;Name=WP_002217890.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217890.1;transl_table=11
NC_017154.1	RefSeq	gene	162178	162537	.	+	.	ID=gene152;Name=YPD4_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00765
NC_017154.1	Protein Homology	CDS	162178	162537	.	+	0	ID=cds148;Parent=gene152;Dbxref=Genbank:WP_002223837.1;Name=WP_002223837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223837.1;transl_table=11
NC_017154.1	RefSeq	gene	162540	162929	.	-	.	ID=gene153;Name=YPD4_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00770;old_locus_tag=YPD4_0129
NC_017154.1	Protein Homology	CDS	162540	162929	.	-	0	ID=cds149;Parent=gene153;Dbxref=Genbank:WP_002208901.1;Name=WP_002208901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208901.1;transl_table=11
NC_017154.1	RefSeq	gene	162964	164088	.	+	.	ID=gene154;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=YPD4_RS00775;pseudo=true
NC_017154.1	Protein Homology	CDS	162964	164088	.	+	0	ID=cds150;Parent=gene154;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=hofQ;product=porin;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	164437	164958	.	+	.	ID=gene155;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=YPD4_RS00780;old_locus_tag=YPD4_0132
NC_017154.1	Protein Homology	CDS	164437	164958	.	+	0	ID=cds151;Parent=gene155;Dbxref=Genbank:WP_002208899.1;Name=WP_002208899.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_002208899.1;transl_table=11
NC_017154.1	RefSeq	gene	165015	166103	.	+	.	ID=gene156;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=YPD4_RS00785;old_locus_tag=YPD4_0133
NC_017154.1	Protein Homology	CDS	165015	166103	.	+	0	ID=cds152;Parent=gene156;Dbxref=Genbank:WP_002208898.1;Name=WP_002208898.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11
NC_017154.1	RefSeq	gene	166357	167346	.	+	.	ID=gene157;Name=YPD4_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00790;old_locus_tag=YPD4_0134
NC_017154.1	Protein Homology	CDS	166357	167346	.	+	0	ID=cds153;Parent=gene157;Dbxref=Genbank:WP_002208897.1;Name=WP_002208897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208897.1;transl_table=11
NC_017154.1	RefSeq	gene	167430	168245	.	+	.	ID=gene158;Name=YPD4_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00795;old_locus_tag=YPD4_0135
NC_017154.1	Protein Homology	CDS	167430	168245	.	+	0	ID=cds154;Parent=gene158;Dbxref=Genbank:WP_002208895.1;Name=WP_002208895.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_002208895.1;transl_table=11
NC_017154.1	RefSeq	gene	168548	169225	.	+	.	ID=gene159;Name=YPD4_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00800;old_locus_tag=YPD4_0136
NC_017154.1	Protein Homology	CDS	168548	169225	.	+	0	ID=cds155;Parent=gene159;Dbxref=Genbank:WP_002215694.1;Name=WP_002215694.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11
NC_017154.1	RefSeq	gene	169218	169916	.	+	.	ID=gene160;Name=YPD4_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00805;old_locus_tag=YPD4_0137
NC_017154.1	Protein Homology	CDS	169218	169916	.	+	0	ID=cds156;Parent=gene160;Dbxref=Genbank:WP_002208892.1;Name=WP_002208892.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_002208892.1;transl_table=11
NC_017154.1	RefSeq	gene	169918	170958	.	+	.	ID=gene161;Name=YPD4_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00810;old_locus_tag=YPD4_0138
NC_017154.1	Protein Homology	CDS	169918	170958	.	+	0	ID=cds157;Parent=gene161;Dbxref=Genbank:WP_002208891.1;Name=WP_002208891.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_002208891.1;transl_table=11
NC_017154.1	RefSeq	gene	171113	172525	.	-	.	ID=gene162;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YPD4_RS00815;old_locus_tag=YPD4_0139
NC_017154.1	Protein Homology	CDS	171113	172525	.	-	0	ID=cds158;Parent=gene162;Dbxref=Genbank:WP_002208890.1;Name=WP_002208890.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;gbkey=CDS;gene=cysG;product=siroheme synthase 2;protein_id=WP_002208890.1;transl_table=11
NC_017154.1	RefSeq	gene	172613	173419	.	-	.	ID=gene163;Name=YPD4_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00820;old_locus_tag=YPD4_0140
NC_017154.1	Protein Homology	CDS	172613	173419	.	-	0	ID=cds159;Parent=gene163;Dbxref=Genbank:WP_002208888.1;Name=WP_002208888.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=WP_002208888.1;transl_table=11
NC_017154.1	RefSeq	gene	173622	173948	.	-	.	ID=gene164;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=YPD4_RS00825;old_locus_tag=YPD4_0141
NC_017154.1	Protein Homology	CDS	173622	173948	.	-	0	ID=cds160;Parent=gene164;Dbxref=Genbank:WP_002208887.1;Name=WP_002208887.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=WP_002208887.1;transl_table=11
NC_017154.1	RefSeq	gene	173945	176491	.	-	.	ID=gene165;Name=YPD4_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00830;old_locus_tag=YPD4_0142
NC_017154.1	Protein Homology	CDS	173945	176491	.	-	0	ID=cds161;Parent=gene165;Dbxref=Genbank:WP_002208886.1;Name=WP_002208886.1;gbkey=CDS;product=nitrite reductase subunit NirD;protein_id=WP_002208886.1;transl_table=11
NC_017154.1	RefSeq	gene	176813	178111	.	+	.	ID=gene166;Name=YPD4_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00835;old_locus_tag=YPD4_0143
NC_017154.1	Protein Homology	CDS	176813	178111	.	+	0	ID=cds162;Parent=gene166;Dbxref=Genbank:WP_002228747.1;Name=WP_002228747.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;product=cytosine deaminase;protein_id=WP_002228747.1;transl_table=11
NC_017154.1	RefSeq	gene	178196	179380	.	-	.	ID=gene167;Name=YPD4_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00840;old_locus_tag=YPD4_0144
NC_017154.1	Protein Homology	CDS	178196	179380	.	-	0	ID=cds163;Parent=gene167;Dbxref=Genbank:WP_002215690.1;Name=WP_002215690.1;gbkey=CDS;product=protein TsgA;protein_id=WP_002215690.1;transl_table=11
NC_017154.1	RefSeq	gene	179866	181926	.	+	.	ID=gene168;Name=YPD4_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00845;old_locus_tag=YPD4_0145
NC_017154.1	Protein Homology	CDS	179866	181926	.	+	0	ID=cds164;Parent=gene168;Dbxref=Genbank:WP_002208882.1;Name=WP_002208882.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002208882.1;transl_table=11
NC_017154.1	RefSeq	gene	182027	183013	.	-	.	ID=gene169;Name=YPD4_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00850;old_locus_tag=YPD4_0146
NC_017154.1	Protein Homology	CDS	182027	183013	.	-	0	ID=cds165;Parent=gene169;Dbxref=Genbank:WP_002208881.1;Name=WP_002208881.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002208881.1;transl_table=11
NC_017154.1	RefSeq	gene	183262	184575	.	-	.	ID=gene170;Name=YPD4_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00855;old_locus_tag=YPD4_0147
NC_017154.1	Protein Homology	CDS	183262	184575	.	-	0	ID=cds166;Parent=gene170;Dbxref=Genbank:WP_002208880.1;Name=WP_002208880.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002208880.1;transl_table=11
NC_017154.1	RefSeq	gene	185091	185660	.	+	.	ID=gene171;Name=YPD4_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00860;old_locus_tag=YPD4_0148
NC_017154.1	Protein Homology	CDS	185091	185660	.	+	0	ID=cds167;Parent=gene171;Dbxref=Genbank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208878.1;transl_table=11
NC_017154.1	RefSeq	gene	185986	187527	.	+	.	ID=gene172;Name=YPD4_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00865;old_locus_tag=YPD4_0149
NC_017154.1	Protein Homology	CDS	185986	187527	.	+	0	ID=cds168;Parent=gene172;Dbxref=Genbank:WP_002215686.1;Name=WP_002215686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215686.1;transl_table=11
NC_017154.1	RefSeq	gene	187770	188345	.	+	.	ID=gene173;Name=YPD4_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00870;old_locus_tag=YPD4_0150
NC_017154.1	Protein Homology	CDS	187770	188345	.	+	0	ID=cds169;Parent=gene173;Dbxref=Genbank:WP_002212294.1;Name=WP_002212294.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=anthranilate synthase subunit II;protein_id=WP_002212294.1;transl_table=11
NC_017154.1	RefSeq	gene	188478	189695	.	+	.	ID=gene174;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=YPD4_RS00875;old_locus_tag=YPD4_0151
NC_017154.1	Protein Homology	CDS	188478	189695	.	+	0	ID=cds170;Parent=gene174;Dbxref=Genbank:WP_002212295.1;Name=WP_002212295.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=acetylornithine aminotransferase;protein_id=WP_002212295.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	189732	189901	.	+	.	ID=id12;gbkey=repeat_region
NC_017154.1	RefSeq	gene	189921	192041	.	-	.	ID=gene175;Name=YPD4_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00880;old_locus_tag=YPD4_0152
NC_017154.1	Protein Homology	CDS	189921	192041	.	-	0	ID=cds171;Parent=gene175;Dbxref=Genbank:WP_002212296.1;Name=WP_002212296.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212296.1;transl_table=11
NC_017154.1	RefSeq	gene	192127	192759	.	-	.	ID=gene176;Name=YPD4_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00885;old_locus_tag=YPD4_0153
NC_017154.1	Protein Homology	CDS	192127	192759	.	-	0	ID=cds172;Parent=gene176;Dbxref=Genbank:WP_002212297.1;Name=WP_002212297.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212297.1;transl_table=11
NC_017154.1	RefSeq	gene	193095	193502	.	+	.	ID=gene177;Name=YPD4_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00890;old_locus_tag=YPD4_0154
NC_017154.1	Protein Homology	CDS	193095	193502	.	+	0	ID=cds173;Parent=gene177;Dbxref=Genbank:WP_002212298.1;Name=WP_002212298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212298.1;transl_table=11
NC_017154.1	RefSeq	gene	193574	194005	.	+	.	ID=gene178;Name=YPD4_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00895;old_locus_tag=YPD4_0155
NC_017154.1	Protein Homology	CDS	193574	194005	.	+	0	ID=cds174;Parent=gene178;Dbxref=Genbank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228139.1;transl_table=11
NC_017154.1	RefSeq	gene	194183	195052	.	-	.	ID=gene179;Name=YPD4_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00900;old_locus_tag=YPD4_0156
NC_017154.1	Protein Homology	CDS	194183	195052	.	-	0	ID=cds175;Parent=gene179;Dbxref=Genbank:WP_002212300.1;Name=WP_002212300.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11
NC_017154.1	RefSeq	gene	195201	195437	.	-	.	ID=gene180;Name=YPD4_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00905
NC_017154.1	Protein Homology	CDS	195201	195437	.	-	0	ID=cds176;Parent=gene180;Dbxref=Genbank:WP_002212301.1;Name=WP_002212301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212301.1;transl_table=11
NC_017154.1	RefSeq	gene	195434	196414	.	-	.	ID=gene181;Name=YPD4_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00910;old_locus_tag=YPD4_0157
NC_017154.1	Protein Homology	CDS	195434	196414	.	-	0	ID=cds177;Parent=gene181;Dbxref=Genbank:WP_002212302.1;Name=WP_002212302.1;gbkey=CDS;product=hydrolase;protein_id=WP_002212302.1;transl_table=11
NC_017154.1	RefSeq	gene	196516	197118	.	+	.	ID=gene182;Name=YPD4_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00915;old_locus_tag=YPD4_0158
NC_017154.1	Protein Homology	CDS	196516	197118	.	+	0	ID=cds178;Parent=gene182;Dbxref=Genbank:WP_002212303.1;Name=WP_002212303.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_002212303.1;transl_table=11
NC_017154.1	RefSeq	gene	197321	198382	.	+	.	ID=gene183;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=YPD4_RS00920;old_locus_tag=YPD4_0159
NC_017154.1	Protein Homology	CDS	197321	198382	.	+	0	ID=cds179;Parent=gene183;Dbxref=Genbank:WP_002212305.1;Name=WP_002212305.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine ABC transporter substrate-binding protein;protein_id=WP_002212305.1;transl_table=11
NC_017154.1	RefSeq	gene	198391	199158	.	+	.	ID=gene184;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=YPD4_RS00925;old_locus_tag=YPD4_0160
NC_017154.1	Protein Homology	CDS	198391	199158	.	+	0	ID=cds180;Parent=gene184;Dbxref=Genbank:WP_002212307.1;Name=WP_002212307.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine import ATP-binding protein TauB;protein_id=WP_002212307.1;transl_table=11
NC_017154.1	RefSeq	gene	199155	200009	.	+	.	ID=gene185;Name=YPD4_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00930;old_locus_tag=YPD4_0161
NC_017154.1	Protein Homology	CDS	199155	200009	.	+	0	ID=cds181;Parent=gene185;Dbxref=Genbank:WP_002212309.1;Name=WP_002212309.1;gbkey=CDS;product=taurine ABC transporter permease;protein_id=WP_002212309.1;transl_table=11
NC_017154.1	RefSeq	gene	200006	200854	.	+	.	ID=gene186;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=YPD4_RS00935;old_locus_tag=YPD4_0162
NC_017154.1	Protein Homology	CDS	200006	200854	.	+	0	ID=cds182;Parent=gene186;Dbxref=Genbank:WP_002212310.1;Name=WP_002212310.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11
NC_017154.1	RefSeq	gene	200867	201847	.	-	.	ID=gene187;Name=YPD4_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00940;old_locus_tag=YPD4_0163
NC_017154.1	Protein Homology	CDS	200867	201847	.	-	0	ID=cds183;Parent=gene187;Dbxref=Genbank:WP_002212311.1;Name=WP_002212311.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002212311.1;transl_table=11
NC_017154.1	RefSeq	gene	201940	202929	.	-	.	ID=gene188;Name=YPD4_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00945;old_locus_tag=YPD4_0164
NC_017154.1	Protein Homology	CDS	201940	202929	.	-	0	ID=cds184;Parent=gene188;Dbxref=Genbank:WP_002212312.1;Name=WP_002212312.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002212312.1;transl_table=11
NC_017154.1	RefSeq	gene	203064	204982	.	-	.	ID=gene189;Name=YPD4_RS00950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS00950;pseudo=true
NC_017154.1	Protein Homology	CDS	203064	204982	.	-	0	ID=cds185;Parent=gene189;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	205233	205781	.	+	.	ID=gene190;Name=YPD4_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00955;old_locus_tag=YPD4_0167
NC_017154.1	Protein Homology	CDS	205233	205781	.	+	0	ID=cds186;Parent=gene190;Dbxref=Genbank:WP_002215966.1;Name=WP_002215966.1;Note=required for KefB activity;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_002215966.1;transl_table=11
NC_017154.1	RefSeq	gene	205785	207593	.	+	.	ID=gene191;Name=YPD4_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00960;old_locus_tag=YPD4_0168
NC_017154.1	Protein Homology	CDS	205785	207593	.	+	0	ID=cds187;Parent=gene191;Dbxref=Genbank:WP_002212314.1;Name=WP_002212314.1;Note=involved in potassium efflux;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_002212314.1;transl_table=11
NC_017154.1	RefSeq	gene	207609	207830	.	+	.	ID=gene192;Name=YPD4_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00965
NC_017154.1	Protein Homology	CDS	207609	207830	.	+	0	ID=cds188;Parent=gene192;Dbxref=Genbank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212315.1;transl_table=11
NC_017154.1	RefSeq	gene	207925	208512	.	+	.	ID=gene193;Name=YPD4_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00970;old_locus_tag=YPD4_0169
NC_017154.1	Protein Homology	CDS	207925	208512	.	+	0	ID=cds189;Parent=gene193;Dbxref=Genbank:WP_002212316.1;Name=WP_002212316.1;Note=rotamase;gbkey=CDS;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212316.1;transl_table=11
NC_017154.1	RefSeq	gene	208733	208951	.	-	.	ID=gene194;Name=YPD4_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00975
NC_017154.1	Protein Homology	CDS	208733	208951	.	-	0	ID=cds190;Parent=gene194;Dbxref=Genbank:WP_002212317.1;Name=WP_002212317.1;Note=required for phi X174 lysis;gbkey=CDS;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11
NC_017154.1	RefSeq	gene	209266	210066	.	+	.	ID=gene195;Name=YPD4_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00980;old_locus_tag=YPD4_0170
NC_017154.1	Protein Homology	CDS	209266	210066	.	+	0	ID=cds191;Parent=gene195;Dbxref=Genbank:WP_002212318.1;Name=WP_002212318.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11
NC_017154.1	RefSeq	gene	210320	211042	.	+	.	ID=gene196;Name=YPD4_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00985;old_locus_tag=YPD4_0171
NC_017154.1	Protein Homology	CDS	210320	211042	.	+	0	ID=cds192;Parent=gene196;Dbxref=Genbank:WP_002212319.1;Name=WP_002212319.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212319.1;transl_table=11
NC_017154.1	RefSeq	gene	211042	211437	.	+	.	ID=gene197;Name=YPD4_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00990;old_locus_tag=YPD4_0172
NC_017154.1	Protein Homology	CDS	211042	211437	.	+	0	ID=cds193;Parent=gene197;Dbxref=Genbank:WP_002212320.1;Name=WP_002212320.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfurtransferase TusD;protein_id=WP_002212320.1;transl_table=11
NC_017154.1	RefSeq	gene	211437	211802	.	+	.	ID=gene198;Name=YPD4_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS00995;old_locus_tag=YPD4_0173
NC_017154.1	Protein Homology	CDS	211437	211802	.	+	0	ID=cds194;Parent=gene198;Dbxref=Genbank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;product=protein TusC;protein_id=WP_002212321.1;transl_table=11
NC_017154.1	RefSeq	gene	211822	212109	.	+	.	ID=gene199;Name=YPD4_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01000
NC_017154.1	Protein Homology	CDS	211822	212109	.	+	0	ID=cds195;Parent=gene199;Dbxref=Genbank:WP_002212322.1;Name=WP_002212322.1;gbkey=CDS;product=protein TusB;protein_id=WP_002212322.1;transl_table=11
NC_017154.1	RefSeq	gene	212247	212621	.	+	.	ID=gene200;Name=YPD4_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01005;old_locus_tag=YPD4_0174
NC_017154.1	Protein Homology	CDS	212247	212621	.	+	0	ID=cds196;Parent=gene200;Dbxref=Genbank:WP_002212323.1;Name=WP_002212323.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11
NC_017154.1	RefSeq	gene	212718	213188	.	+	.	ID=gene201;Name=YPD4_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01010;old_locus_tag=YPD4_0175
NC_017154.1	Protein Homology	CDS	212718	213188	.	+	0	ID=cds197;Parent=gene201;Dbxref=Genbank:WP_002212324.1;Name=WP_002212324.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11
NC_017154.1	RefSeq	gene	213282	215390	.	+	.	ID=gene202;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=YPD4_RS01015;old_locus_tag=YPD4_0176
NC_017154.1	Protein Homology	CDS	213282	215390	.	+	0	ID=cds198;Parent=gene202;Dbxref=Genbank:WP_002212325.1;Name=WP_002212325.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_002212325.1;transl_table=11
NC_017154.1	RefSeq	gene	215463	216647	.	+	.	ID=gene203;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPD4_RS01020;old_locus_tag=YPD4_0177
NC_017154.1	Protein Homology	CDS	215463	216647	.	+	0	ID=cds199;Parent=gene203;Dbxref=Genbank:WP_002212326.1;Name=WP_002212326.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002212326.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	216697	217425	.	+	.	ID=id13;gbkey=repeat_region
NC_017154.1	RefSeq	gene	216850	217308	.	+	.	ID=gene204;Name=YPD4_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01025;old_locus_tag=YPD4_0178
NC_017154.1	Protein Homology	CDS	216850	217308	.	+	0	ID=cds200;Parent=gene204;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	217496	217690	.	+	.	ID=gene205;Name=YPD4_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01030
NC_017154.1	Protein Homology	CDS	217496	217690	.	+	0	ID=cds201;Parent=gene205;Dbxref=Genbank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11
NC_017154.1	RefSeq	gene	217769	218242	.	+	.	ID=gene206;Name=YPD4_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01035;old_locus_tag=YPD4_0179
NC_017154.1	Protein Homology	CDS	217769	218242	.	+	0	ID=cds202;Parent=gene206;Dbxref=Genbank:WP_002212327.1;Name=WP_002212327.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_002212327.1;transl_table=11
NC_017154.1	RefSeq	gene	218657	218968	.	+	.	ID=gene207;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=YPD4_RS01040;old_locus_tag=YPD4_0180
NC_017154.1	Protein Homology	CDS	218657	218968	.	+	0	ID=cds203;Parent=gene207;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11
NC_017154.1	RefSeq	gene	219001	219630	.	+	.	ID=gene208;Name=YPD4_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01045;old_locus_tag=YPD4_0181
NC_017154.1	Protein Homology	CDS	219001	219630	.	+	0	ID=cds204;Parent=gene208;Dbxref=Genbank:WP_002218932.1;Name=WP_002218932.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11
NC_017154.1	RefSeq	gene	219647	220252	.	+	.	ID=gene209;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=YPD4_RS01050;old_locus_tag=YPD4_0182
NC_017154.1	Protein Homology	CDS	219647	220252	.	+	0	ID=cds205;Parent=gene209;Dbxref=Genbank:WP_002218934.1;Name=WP_002218934.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_002218934.1;transl_table=11
NC_017154.1	RefSeq	gene	220249	220551	.	+	.	ID=gene210;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=YPD4_RS01055;old_locus_tag=YPD4_0183
NC_017154.1	Protein Homology	CDS	220249	220551	.	+	0	ID=cds206;Parent=gene210;Dbxref=Genbank:WP_002213423.1;Name=WP_002213423.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11
NC_017154.1	RefSeq	gene	220568	221392	.	+	.	ID=gene211;Name=YPD4_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01060;old_locus_tag=YPD4_0184
NC_017154.1	Protein Homology	CDS	220568	221392	.	+	0	ID=cds207;Parent=gene211;Dbxref=Genbank:WP_002213425.1;Name=WP_002213425.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11
NC_017154.1	RefSeq	gene	221407	221685	.	+	.	ID=gene212;Name=YPD4_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01065
NC_017154.1	Protein Homology	CDS	221407	221685	.	+	0	ID=cds208;Parent=gene212;Dbxref=Genbank:WP_002213430.1;Name=WP_002213430.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11
NC_017154.1	RefSeq	gene	221700	222032	.	+	.	ID=gene213;Name=YPD4_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01070;old_locus_tag=YPD4_0185
NC_017154.1	Protein Homology	CDS	221700	222032	.	+	0	ID=cds209;Parent=gene213;Dbxref=Genbank:WP_002223844.1;Name=WP_002223844.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11
NC_017154.1	RefSeq	gene	222050	222748	.	+	.	ID=gene214;Name=YPD4_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01075;old_locus_tag=YPD4_0186
NC_017154.1	Protein Homology	CDS	222050	222748	.	+	0	ID=cds210;Parent=gene214;Dbxref=Genbank:WP_002221644.1;Name=WP_002221644.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11
NC_017154.1	RefSeq	gene	222761	223171	.	+	.	ID=gene215;Name=YPD4_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01080;old_locus_tag=YPD4_0187
NC_017154.1	Protein Homology	CDS	222761	223171	.	+	0	ID=cds211;Parent=gene215;Dbxref=Genbank:WP_002218940.1;Name=WP_002218940.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_002218940.1;transl_table=11
NC_017154.1	RefSeq	gene	223171	223362	.	+	.	ID=gene216;Name=YPD4_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01085
NC_017154.1	Protein Homology	CDS	223171	223362	.	+	0	ID=cds212;Parent=gene216;Dbxref=Genbank:WP_002218942.1;Name=WP_002218942.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_002218942.1;transl_table=11
NC_017154.1	RefSeq	gene	223362	223616	.	+	.	ID=gene217;Name=YPD4_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01090
NC_017154.1	Protein Homology	CDS	223362	223616	.	+	0	ID=cds213;Parent=gene217;Dbxref=Genbank:WP_002228135.1;Name=WP_002228135.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_002228135.1;transl_table=11
NC_017154.1	RefSeq	gene	223797	224168	.	+	.	ID=gene218;Name=YPD4_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01095;old_locus_tag=YPD4_0188
NC_017154.1	Protein Homology	CDS	223797	224168	.	+	0	ID=cds214;Parent=gene218;Dbxref=Genbank:WP_002213325.1;Name=WP_002213325.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11
NC_017154.1	RefSeq	gene	224179	224493	.	+	.	ID=gene219;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=YPD4_RS01100;old_locus_tag=YPD4_0189
NC_017154.1	Protein Homology	CDS	224179	224493	.	+	0	ID=cds215;Parent=gene219;Dbxref=Genbank:WP_002213327.1;Name=WP_002213327.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11
NC_017154.1	RefSeq	gene	224508	225047	.	+	.	ID=gene220;Name=YPD4_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01105;old_locus_tag=YPD4_0190
NC_017154.1	Protein Homology	CDS	224508	225047	.	+	0	ID=cds216;Parent=gene220;Dbxref=Genbank:WP_002213329.1;Name=WP_002213329.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11
NC_017154.1	RefSeq	gene	225061	225366	.	+	.	ID=gene221;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=YPD4_RS01110;old_locus_tag=YPD4_0191
NC_017154.1	Protein Homology	CDS	225061	225366	.	+	0	ID=cds217;Parent=gene221;Dbxref=Genbank:WP_002213330.1;Name=WP_002213330.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11
NC_017154.1	RefSeq	gene	225400	225792	.	+	.	ID=gene222;Name=YPD4_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01115;old_locus_tag=YPD4_0192
NC_017154.1	Protein Homology	CDS	225400	225792	.	+	0	ID=cds218;Parent=gene222;Dbxref=Genbank:WP_002213332.1;Name=WP_002213332.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11
NC_017154.1	RefSeq	gene	225807	226340	.	+	.	ID=gene223;Name=YPD4_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01120;old_locus_tag=YPD4_0193
NC_017154.1	Protein Homology	CDS	225807	226340	.	+	0	ID=cds219;Parent=gene223;Dbxref=Genbank:WP_002213334.1;Name=WP_002213334.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11
NC_017154.1	RefSeq	gene	226350	226703	.	+	.	ID=gene224;Name=YPD4_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01125;old_locus_tag=YPD4_0194
NC_017154.1	Protein Homology	CDS	226350	226703	.	+	0	ID=cds220;Parent=gene224;Dbxref=Genbank:WP_002213336.1;Name=WP_002213336.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11
NC_017154.1	RefSeq	gene	226718	227221	.	+	.	ID=gene225;Name=YPD4_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01130;old_locus_tag=YPD4_0195
NC_017154.1	Protein Homology	CDS	226718	227221	.	+	0	ID=cds221;Parent=gene225;Dbxref=Genbank:WP_002213337.1;Name=WP_002213337.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11
NC_017154.1	RefSeq	gene	227224	227403	.	+	.	ID=gene226;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=YPD4_RS01135
NC_017154.1	Protein Homology	CDS	227224	227403	.	+	0	ID=cds222;Parent=gene226;Dbxref=Genbank:WP_002213339.1;Name=WP_002213339.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11
NC_017154.1	RefSeq	gene	227407	227841	.	+	.	ID=gene227;Name=YPD4_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01140;old_locus_tag=YPD4_0196
NC_017154.1	Protein Homology	CDS	227407	227841	.	+	0	ID=cds223;Parent=gene227;Dbxref=Genbank:WP_002213341.1;Name=WP_002213341.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11
NC_017154.1	RefSeq	gene	227849	229181	.	+	.	ID=gene228;Name=secY;gbkey=Gene;gene=secY;gene_biotype=pseudogene;locus_tag=YPD4_RS01145;old_locus_tag=YPD4_0197;pseudo=true
NC_017154.1	Protein Homology	CDS	227849	229181	.	+	0	ID=cds224;Parent=gene228;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	229215	229331	.	+	.	ID=gene229;Name=YPD4_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01150
NC_017154.1	Protein Homology	CDS	229215	229331	.	+	0	ID=cds225;Parent=gene229;Dbxref=Genbank:WP_002227352.1;Name=WP_002227352.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11
NC_017154.1	RefSeq	gene	229479	229835	.	+	.	ID=gene230;Name=YPD4_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01155;old_locus_tag=YPD4_0198
NC_017154.1	Protein Homology	CDS	229479	229835	.	+	0	ID=cds226;Parent=gene230;Dbxref=Genbank:WP_002213346.1;Name=WP_002213346.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11
NC_017154.1	RefSeq	gene	229852	230241	.	+	.	ID=gene231;Name=YPD4_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01160;old_locus_tag=YPD4_0199
NC_017154.1	Protein Homology	CDS	229852	230241	.	+	0	ID=cds227;Parent=gene231;Dbxref=Genbank:WP_002218948.1;Name=WP_002218948.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_002218948.1;transl_table=11
NC_017154.1	RefSeq	gene	230272	230892	.	+	.	ID=gene232;Name=YPD4_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01165;old_locus_tag=YPD4_0200
NC_017154.1	Protein Homology	CDS	230272	230892	.	+	0	ID=cds228;Parent=gene232;Dbxref=Genbank:WP_002218949.1;Name=WP_002218949.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_002218949.1;transl_table=11
NC_017154.1	RefSeq	gene	230918	231907	.	+	.	ID=gene233;Name=YPD4_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01170;old_locus_tag=YPD4_0201
NC_017154.1	Protein Homology	CDS	230918	231907	.	+	0	ID=cds229;Parent=gene233;Dbxref=Genbank:WP_002209013.1;Name=WP_002209013.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11
NC_017154.1	RefSeq	gene	231948	232337	.	+	.	ID=gene234;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=YPD4_RS01175;old_locus_tag=YPD4_0202
NC_017154.1	Protein Homology	CDS	231948	232337	.	+	0	ID=cds230;Parent=gene234;Dbxref=Genbank:WP_002209014.1;Name=WP_002209014.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11
NC_017154.1	RefSeq	gene	232784	233209	.	+	.	ID=gene235;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=YPD4_RS01180;old_locus_tag=YPD4_0203
NC_017154.1	Protein Homology	CDS	232784	233209	.	+	0	ID=cds231;Parent=gene235;Dbxref=Genbank:WP_002215702.1;Name=WP_002215702.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=Zn(II)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11
NC_017154.1	RefSeq	gene	233297	233497	.	+	.	ID=gene236;Name=YPD4_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01185
NC_017154.1	Protein Homology	CDS	233297	233497	.	+	0	ID=cds232;Parent=gene236;Dbxref=Genbank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209016.1;transl_table=11
NC_017154.1	RefSeq	gene	233607	234020	.	-	.	ID=gene237;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=YPD4_RS01190;old_locus_tag=YPD4_0204
NC_017154.1	Protein Homology	CDS	233607	234020	.	-	0	ID=cds233;Parent=gene237;Dbxref=Genbank:WP_002209017.1;Name=WP_002209017.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=WP_002209017.1;transl_table=11
NC_017154.1	RefSeq	gene	234159	235535	.	-	.	ID=gene238;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=YPD4_RS01195;old_locus_tag=YPD4_0205
NC_017154.1	Protein Homology	CDS	234159	235535	.	-	0	ID=cds234;Parent=gene238;Dbxref=Genbank:WP_002209018.1;Name=WP_002209018.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=WP_002209018.1;transl_table=11
NC_017154.1	RefSeq	gene	235591	236880	.	-	.	ID=gene239;Name=YPD4_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01200;old_locus_tag=YPD4_0206
NC_017154.1	Protein Homology	CDS	235591	236880	.	-	0	ID=cds235;Parent=gene239;Dbxref=Genbank:WP_002215705.1;Name=WP_002215705.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase B;protein_id=WP_002215705.1;transl_table=11
NC_017154.1	RefSeq	gene	236974	237921	.	-	.	ID=gene240;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=YPD4_RS01205;old_locus_tag=YPD4_0207
NC_017154.1	Protein Homology	CDS	236974	237921	.	-	0	ID=cds236;Parent=gene240;Dbxref=Genbank:WP_002209020.1;Name=WP_002209020.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_002209020.1;transl_table=11
NC_017154.1	RefSeq	gene	237946	238458	.	-	.	ID=gene241;Name=YPD4_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01210;old_locus_tag=YPD4_0208
NC_017154.1	Protein Homology	CDS	237946	238458	.	-	0	ID=cds237;Parent=gene241;Dbxref=Genbank:WP_002209021.1;Name=WP_002209021.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11
NC_017154.1	RefSeq	gene	238593	239714	.	+	.	ID=gene242;Name=YPD4_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01215;old_locus_tag=YPD4_0209
NC_017154.1	Protein Homology	CDS	238593	239714	.	+	0	ID=cds238;Parent=gene242;Dbxref=Genbank:WP_002209022.1;Name=WP_002209022.1;gbkey=CDS;product=DNA processing protein DprA;protein_id=WP_002209022.1;transl_table=11
NC_017154.1	RefSeq	gene	239686	240159	.	+	.	ID=gene243;Name=YPD4_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01220;old_locus_tag=YPD4_0210
NC_017154.1	Protein Homology	CDS	239686	240159	.	+	0	ID=cds239;Parent=gene243;Dbxref=Genbank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;product=protein Smg;protein_id=WP_002209023.1;transl_table=11
NC_017154.1	RefSeq	gene	240200	240739	.	+	.	ID=gene244;Name=YPD4_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01225;old_locus_tag=YPD4_0211
NC_017154.1	Protein Homology	CDS	240200	240739	.	+	0	ID=cds240;Parent=gene244;Dbxref=Genbank:WP_002228134.1;Name=WP_002228134.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228134.1;transl_table=11
NC_017154.1	RefSeq	gene	240741	241313	.	+	.	ID=gene245;Name=YPD4_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01230;old_locus_tag=YPD4_0212
NC_017154.1	Protein Homology	CDS	240741	241313	.	+	0	ID=cds241;Parent=gene245;Dbxref=Genbank:WP_002209025.1;Name=WP_002209025.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=threonylcarbamoyl-AMP synthase;protein_id=WP_002209025.1;transl_table=11
NC_017154.1	RefSeq	gene	241322	242143	.	+	.	ID=gene246;Name=YPD4_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01235;old_locus_tag=YPD4_0213
NC_017154.1	Protein Homology	CDS	241322	242143	.	+	0	ID=cds242;Parent=gene246;Dbxref=Genbank:WP_002209026.1;Name=WP_002209026.1;gbkey=CDS;product=shikimate dehydrogenase (NADP+);protein_id=WP_002209026.1;transl_table=11
NC_017154.1	RefSeq	gene	242198	242683	.	-	.	ID=gene247;Name=YPD4_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01240;old_locus_tag=YPD4_0214
NC_017154.1	Protein Homology	CDS	242198	242683	.	-	0	ID=cds243;Parent=gene247;Dbxref=Genbank:WP_002215709.1;Name=WP_002215709.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002215709.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	242727	244683	.	+	.	ID=id14;gbkey=repeat_region
NC_017154.1	RefSeq	gene	242795	243574	.	-	.	ID=gene248;Name=YPD4_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01245;old_locus_tag=YPD4_0215
NC_017154.1	Protein Homology	CDS	242795	243574	.	-	0	ID=cds244;Parent=gene248;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	243574	244575	.	-	.	ID=gene249;Name=YPD4_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01250;old_locus_tag=YPD4_0216
NC_017154.1	Protein Homology	CDS	243574	244575	.	-	0	ID=cds245;Parent=gene249;Dbxref=Genbank:WP_044023390.1;Name=WP_044023390.1;gbkey=CDS;product=transposase;protein_id=WP_044023390.1;transl_table=11
NC_017154.1	RefSeq	gene	244655	245641	.	+	.	ID=gene250;Name=YPD4_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01255;old_locus_tag=YPD4_0217
NC_017154.1	Protein Homology	CDS	244655	245641	.	+	0	ID=cds246;Parent=gene250;Dbxref=Genbank:WP_002209028.1;Name=WP_002209028.1;gbkey=CDS;product=hydrolase;protein_id=WP_002209028.1;transl_table=11
NC_017154.1	RefSeq	gene	245715	247370	.	-	.	ID=gene251;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=YPD4_RS01260;old_locus_tag=YPD4_0218
NC_017154.1	Protein Homology	CDS	245715	247370	.	-	0	ID=cds247;Parent=gene251;Dbxref=Genbank:WP_002209029.1;Name=WP_002209029.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=cation/acetate symporter ActP;protein_id=WP_002209029.1;transl_table=11
NC_017154.1	RefSeq	gene	247367	247678	.	-	.	ID=gene252;Name=YPD4_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01265;old_locus_tag=YPD4_0219
NC_017154.1	Protein Homology	CDS	247367	247678	.	-	0	ID=cds248;Parent=gene252;Dbxref=Genbank:WP_002209030.1;Name=WP_002209030.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209030.1;transl_table=11
NC_017154.1	RefSeq	gene	247735	249693	.	-	.	ID=gene253;Name=YPD4_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01270;old_locus_tag=YPD4_0220
NC_017154.1	Protein Homology	CDS	247735	249693	.	-	0	ID=cds249;Parent=gene253;Dbxref=Genbank:WP_002209031.1;Name=WP_002209031.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=WP_002209031.1;transl_table=11
NC_017154.1	RefSeq	gene	250594	251910	.	+	.	ID=gene254;Name=YPD4_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01275;old_locus_tag=YPD4_0221
NC_017154.1	Protein Homology	CDS	250594	251910	.	+	0	ID=cds250;Parent=gene254;Dbxref=Genbank:WP_002209033.1;Name=WP_002209033.1;gbkey=CDS;product=proton glutamate symport protein;protein_id=WP_002209033.1;transl_table=11
NC_017154.1	RefSeq	gene	252088	252720	.	-	.	ID=gene255;Name=YPD4_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01280;old_locus_tag=YPD4_0222
NC_017154.1	Protein Homology	CDS	252088	252720	.	-	0	ID=cds251;Parent=gene255;Dbxref=Genbank:WP_002209034.1;Name=WP_002209034.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209034.1;transl_table=11
NC_017154.1	RefSeq	gene	252733	255552	.	-	.	ID=gene256;Name=YPD4_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01285;old_locus_tag=YPD4_0223
NC_017154.1	Protein Homology	CDS	252733	255552	.	-	0	ID=cds252;Parent=gene256;Dbxref=Genbank:WP_002209035.1;Name=WP_002209035.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=two-component system sensor histidine kinase/response regulator;protein_id=WP_002209035.1;transl_table=11
NC_017154.1	RefSeq	gene	255796	257295	.	+	.	ID=gene257;Name=YPD4_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01290;old_locus_tag=YPD4_0224
NC_017154.1	Protein Homology	CDS	255796	257295	.	+	0	ID=cds253;Parent=gene257;Dbxref=Genbank:WP_002353603.1;Name=WP_002353603.1;gbkey=CDS;product=type II secretory pathway protein;protein_id=WP_002353603.1;transl_table=11
NC_017154.1	RefSeq	gene	257297	258511	.	+	.	ID=gene258;Name=YPD4_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01295;old_locus_tag=YPD4_0225
NC_017154.1	Protein Homology	CDS	257297	258511	.	+	0	ID=cds254;Parent=gene258;Dbxref=Genbank:WP_002209037.1;Name=WP_002209037.1;gbkey=CDS;product=type III secretion protein SsaD;protein_id=WP_002209037.1;transl_table=11
NC_017154.1	RefSeq	gene	258530	258751	.	+	.	ID=gene259;Name=YPD4_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01300
NC_017154.1	Protein Homology	CDS	258530	258751	.	+	0	ID=cds255;Parent=gene259;Dbxref=Genbank:WP_002209038.1;Name=WP_002209038.1;gbkey=CDS;product=type III secretion system protein%2C YseE family;protein_id=WP_002209038.1;transl_table=11
NC_017154.1	RefSeq	gene	258925	259545	.	+	.	ID=gene260;Name=YPD4_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01305;old_locus_tag=YPD4_0226
NC_017154.1	Protein Homology	CDS	258925	259545	.	+	0	ID=cds256;Parent=gene260;Dbxref=Genbank:WP_002216326.1;Name=WP_002216326.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002216326.1;transl_table=11
NC_017154.1	RefSeq	gene	259555	259770	.	+	.	ID=gene261;Name=YPD4_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01310
NC_017154.1	Protein Homology	CDS	259555	259770	.	+	0	ID=cds257;Parent=gene261;Dbxref=Genbank:WP_002216328.1;Name=WP_002216328.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002216328.1;transl_table=11
NC_017154.1	RefSeq	gene	259767	260015	.	+	.	ID=gene262;Name=YPD4_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01315
NC_017154.1	Protein Homology	CDS	259767	260015	.	+	0	ID=cds258;Parent=gene262;Dbxref=Genbank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;product=type III secretion system protein%2C SsaH family;protein_id=WP_002209040.1;transl_table=11
NC_017154.1	RefSeq	gene	260113	260364	.	+	.	ID=gene263;Name=YPD4_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01320
NC_017154.1	Protein Homology	CDS	260113	260364	.	+	0	ID=cds259;Parent=gene263;Dbxref=Genbank:WP_002209041.1;Name=WP_002209041.1;gbkey=CDS;product=type III secretion apparatus protein%2C YscI/HrpB;protein_id=WP_002209041.1;transl_table=11
NC_017154.1	RefSeq	gene	260361	261092	.	+	.	ID=gene264;Name=YPD4_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01325;old_locus_tag=YPD4_0227
NC_017154.1	Protein Homology	CDS	260361	261092	.	+	0	ID=cds260;Parent=gene264;Dbxref=Genbank:WP_002209042.1;Name=WP_002209042.1;gbkey=CDS;product=type III secretion protein SsaJ;protein_id=WP_002209042.1;transl_table=11
NC_017154.1	RefSeq	gene	261267	261860	.	+	.	ID=gene265;Name=YPD4_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01330;old_locus_tag=YPD4_0228
NC_017154.1	Protein Homology	CDS	261267	261860	.	+	0	ID=cds261;Parent=gene265;Dbxref=Genbank:WP_002209043.1;Name=WP_002209043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209043.1;transl_table=11
NC_017154.1	RefSeq	gene	261857	262504	.	+	.	ID=gene266;Name=YPD4_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01335;old_locus_tag=YPD4_0229
NC_017154.1	Protein Homology	CDS	261857	262504	.	+	0	ID=cds262;Parent=gene266;Dbxref=Genbank:WP_002216333.1;Name=WP_002216333.1;gbkey=CDS;product=type III secretion protein HrpE;protein_id=WP_002216333.1;transl_table=11
NC_017154.1	RefSeq	gene	262491	264545	.	+	.	ID=gene267;Name=YPD4_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01340;old_locus_tag=YPD4_0230
NC_017154.1	Protein Homology	CDS	262491	264545	.	+	0	ID=cds263;Parent=gene267;Dbxref=Genbank:WP_002356788.1;Name=WP_002356788.1;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;gbkey=CDS;product=secretion system apparatus protein SsaV;protein_id=WP_002356788.1;transl_table=11
NC_017154.1	RefSeq	gene	264532	265869	.	+	.	ID=gene268;Name=YPD4_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01345;old_locus_tag=YPD4_0231
NC_017154.1	Protein Homology	CDS	264532	265869	.	+	0	ID=cds264;Parent=gene268;Dbxref=Genbank:WP_002209046.1;Name=WP_002209046.1;gbkey=CDS;product=type III secretion system ATPase;protein_id=WP_002209046.1;transl_table=11
NC_017154.1	RefSeq	gene	265866	266267	.	+	.	ID=gene269;Name=YPD4_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01350;old_locus_tag=YPD4_0232
NC_017154.1	Protein Homology	CDS	265866	266267	.	+	0	ID=cds265;Parent=gene269;Dbxref=Genbank:WP_002209047.1;Name=WP_002209047.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209047.1;transl_table=11
NC_017154.1	RefSeq	gene	266248	266646	.	+	.	ID=gene270;Name=YPD4_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01355;old_locus_tag=YPD4_0233
NC_017154.1	Protein Homology	CDS	266248	266646	.	+	0	ID=cds266;Parent=gene270;Dbxref=Genbank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11
NC_017154.1	RefSeq	gene	266624	267586	.	+	.	ID=gene271;Name=YPD4_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01360;old_locus_tag=YPD4_0234
NC_017154.1	Protein Homology	CDS	266624	267586	.	+	0	ID=cds267;Parent=gene271;Dbxref=Genbank:WP_002209049.1;Name=WP_002209049.1;gbkey=CDS;product=type III secretion protein SsaQ;protein_id=WP_002209049.1;transl_table=11
NC_017154.1	RefSeq	gene	267713	268363	.	+	.	ID=gene272;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPD4_RS01365;old_locus_tag=YPD4_0235
NC_017154.1	Protein Homology	CDS	267713	268363	.	+	0	ID=cds268;Parent=gene272;Dbxref=Genbank:WP_002221023.1;Name=WP_002221023.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=flagellar biosynthesis protein FliP;protein_id=WP_002221023.1;transl_table=11
NC_017154.1	RefSeq	gene	268360	268653	.	+	.	ID=gene273;Name=YPD4_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01370
NC_017154.1	Protein Homology	CDS	268360	268653	.	+	0	ID=cds269;Parent=gene273;Dbxref=Genbank:WP_002209051.1;Name=WP_002209051.1;gbkey=CDS;product=type III secretion system protein SsaS;protein_id=WP_002209051.1;transl_table=11
NC_017154.1	RefSeq	gene	268655	269449	.	+	.	ID=gene274;Name=YPD4_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01375
NC_017154.1	Protein Homology	CDS	268655	269449	.	+	0	ID=cds270;Parent=gene274;Dbxref=Genbank:WP_002209052.1;Name=WP_002209052.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209052.1;transl_table=11
NC_017154.1	RefSeq	gene	269439	270505	.	+	.	ID=gene275;Name=YPD4_RS01380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS01380;pseudo=true
NC_017154.1	Protein Homology	CDS	269439	270505	.	+	0	ID=cds271;Parent=gene275;exception=annotated by transcript or proteomic data;gbkey=CDS;product=secretion system apparatus protein SsaU;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	270624	270795	.	+	.	ID=id15;gbkey=repeat_region
NC_017154.1	RefSeq	gene	270888	272102	.	+	.	ID=gene276;Name=YPD4_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01385;old_locus_tag=YPD4_0239
NC_017154.1	Protein Homology	CDS	270888	272102	.	+	0	ID=cds272;Parent=gene276;Dbxref=Genbank:WP_002209054.1;Name=WP_002209054.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209054.1;transl_table=11
NC_017154.1	RefSeq	gene	272099	272368	.	+	.	ID=gene277;Name=YPD4_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01390
NC_017154.1	Protein Homology	CDS	272099	272368	.	+	0	ID=cds273;Parent=gene277;Dbxref=Genbank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209055.1;transl_table=11
NC_017154.1	RefSeq	gene	272446	273429	.	-	.	ID=gene278;Name=YPD4_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01395;old_locus_tag=YPD4_0240
NC_017154.1	Protein Homology	CDS	272446	273429	.	-	0	ID=cds274;Parent=gene278;Dbxref=Genbank:WP_002209056.1;Name=WP_002209056.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209056.1;transl_table=11
NC_017154.1	RefSeq	gene	273599	274885	.	+	.	ID=gene279;Name=YPD4_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01400;old_locus_tag=YPD4_0241
NC_017154.1	Protein Homology	CDS	273599	274885	.	+	0	ID=cds275;Parent=gene279;Dbxref=Genbank:WP_002209057.1;Name=WP_002209057.1;gbkey=CDS;product=transporter;protein_id=WP_002209057.1;transl_table=11
NC_017154.1	RefSeq	gene	274931	276112	.	+	.	ID=gene280;Name=YPD4_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01405;old_locus_tag=YPD4_0242
NC_017154.1	Protein Homology	CDS	274931	276112	.	+	0	ID=cds276;Parent=gene280;Dbxref=Genbank:WP_002215044.1;Name=WP_002215044.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002215044.1;transl_table=11
NC_017154.1	RefSeq	gene	276254	277054	.	-	.	ID=gene281;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;locus_tag=YPD4_RS01410;old_locus_tag=YPD4_0243
NC_017154.1	Protein Homology	CDS	276254	277054	.	-	0	ID=cds277;Parent=gene281;Dbxref=Genbank:WP_002209058.1;Name=WP_002209058.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin import ATP-binding protein HmuV;protein_id=WP_002209058.1;transl_table=11
NC_017154.1	RefSeq	gene	277047	278051	.	-	.	ID=gene282;Name=YPD4_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01415;old_locus_tag=YPD4_0244
NC_017154.1	Protein Homology	CDS	277047	278051	.	-	0	ID=cds278;Parent=gene282;Dbxref=Genbank:WP_002209059.1;Name=WP_002209059.1;gbkey=CDS;product=hemin ABC transporter permease;protein_id=WP_002209059.1;transl_table=11
NC_017154.1	RefSeq	gene	278048	278887	.	-	.	ID=gene283;Name=YPD4_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01420;old_locus_tag=YPD4_0245
NC_017154.1	Protein Homology	CDS	278048	278887	.	-	0	ID=cds279;Parent=gene283;Dbxref=Genbank:WP_002209060.1;Name=WP_002209060.1;gbkey=CDS;product=hemin-binding periplasmic protein HmuT;protein_id=WP_002209060.1;transl_table=11
NC_017154.1	RefSeq	gene	278884	279921	.	-	.	ID=gene284;Name=YPD4_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01425;old_locus_tag=YPD4_0246
NC_017154.1	Protein Homology	CDS	278884	279921	.	-	0	ID=cds280;Parent=gene284;Dbxref=Genbank:WP_002209061.1;Name=WP_002209061.1;gbkey=CDS;product=hemin transporter HmuS;protein_id=WP_002209061.1;transl_table=11
NC_017154.1	RefSeq	gene	280040	282069	.	-	.	ID=gene285;Name=YPD4_RS01430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS01430;pseudo=true
NC_017154.1	Protein Homology	CDS	280040	282069	.	-	0	ID=cds281;Parent=gene285;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ligand-gated channel protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	282484	283134	.	-	.	ID=gene286;Name=YPD4_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01435;old_locus_tag=YPD4_0249
NC_017154.1	Protein Homology	CDS	282484	283134	.	-	0	ID=cds282;Parent=gene286;Dbxref=Genbank:WP_002209064.1;Name=WP_002209064.1;gbkey=CDS;product=NmrA family protein;protein_id=WP_002209064.1;transl_table=11
NC_017154.1	RefSeq	gene	283168	283677	.	-	.	ID=gene287;Name=YPD4_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01440;old_locus_tag=YPD4_0250
NC_017154.1	Protein Homology	CDS	283168	283677	.	-	0	ID=cds283;Parent=gene287;Dbxref=Genbank:WP_002209065.1;Name=WP_002209065.1;gbkey=CDS;product=heme utilization carrier protein;protein_id=WP_002209065.1;transl_table=11
NC_017154.1	RefSeq	gene	283710	285023	.	-	.	ID=gene288;Name=YPD4_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01445;old_locus_tag=YPD4_0251
NC_017154.1	Protein Homology	CDS	283710	285023	.	-	0	ID=cds284;Parent=gene288;Dbxref=Genbank:WP_002209066.1;Name=WP_002209066.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=heme utilization radical SAM enzyme HutW;protein_id=WP_002209066.1;transl_table=11
NC_017154.1	RefSeq	gene	285364	286164	.	-	.	ID=gene289;Name=YPD4_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01450;old_locus_tag=YPD4_0252
NC_017154.1	Protein Homology	CDS	285364	286164	.	-	0	ID=cds285;Parent=gene289;Dbxref=Genbank:WP_002209067.1;Name=WP_002209067.1;gbkey=CDS;product=methylenetetrahydrofolate reductase;protein_id=WP_002209067.1;transl_table=11
NC_017154.1	RefSeq	gene	286479	286967	.	-	.	ID=gene290;Name=YPD4_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01455;old_locus_tag=YPD4_0253
NC_017154.1	Protein Homology	CDS	286479	286967	.	-	0	ID=cds286;Parent=gene290;Dbxref=Genbank:WP_002209068.1;Name=WP_002209068.1;gbkey=CDS;product=tellurium resistance protein TerW;protein_id=WP_002209068.1;transl_table=11
NC_017154.1	RefSeq	gene	287364	288323	.	-	.	ID=gene291;Name=YPD4_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01460;old_locus_tag=YPD4_0254
NC_017154.1	Protein Homology	CDS	287364	288323	.	-	0	ID=cds287;Parent=gene291;Dbxref=Genbank:WP_002209069.1;Name=WP_002209069.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209069.1;transl_table=11
NC_017154.1	RefSeq	gene	288323	289402	.	-	.	ID=gene292;Name=YPD4_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01465;old_locus_tag=YPD4_0255
NC_017154.1	Protein Homology	CDS	288323	289402	.	-	0	ID=cds288;Parent=gene292;Dbxref=Genbank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209070.1;transl_table=11
NC_017154.1	RefSeq	gene	289395	290207	.	-	.	ID=gene293;Name=YPD4_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01470;old_locus_tag=YPD4_0256
NC_017154.1	Protein Homology	CDS	289395	290207	.	-	0	ID=cds289;Parent=gene293;Dbxref=Genbank:WP_002209071.1;Name=WP_002209071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209071.1;transl_table=11
NC_017154.1	RefSeq	gene	290200	291336	.	-	.	ID=gene294;Name=YPD4_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01475;old_locus_tag=YPD4_0257
NC_017154.1	Protein Homology	CDS	290200	291336	.	-	0	ID=cds290;Parent=gene294;Dbxref=Genbank:WP_002209072.1;Name=WP_002209072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209072.1;transl_table=11
NC_017154.1	RefSeq	gene	291348	292409	.	-	.	ID=gene295;Name=YPD4_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01480;old_locus_tag=YPD4_0258
NC_017154.1	Protein Homology	CDS	291348	292409	.	-	0	ID=cds291;Parent=gene295;Dbxref=Genbank:WP_002209073.1;Name=WP_002209073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209073.1;transl_table=11
NC_017154.1	RefSeq	gene	292685	293278	.	+	.	ID=gene296;Name=YPD4_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01485;old_locus_tag=YPD4_0259
NC_017154.1	Protein Homology	CDS	292685	293278	.	+	0	ID=cds292;Parent=gene296;Dbxref=Genbank:WP_002228131.1;Name=WP_002228131.1;gbkey=CDS;product=tellurium resistance protein TerZ;protein_id=WP_002228131.1;transl_table=11
NC_017154.1	RefSeq	gene	293278	294463	.	+	.	ID=gene297;Name=YPD4_RS01490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS01490;pseudo=true
NC_017154.1	Protein Homology	CDS	293278	294463	.	+	0	ID=cds293;Parent=gene297;exception=annotated by transcript or proteomic data;gbkey=CDS;product=tellurium resistance protein TerA;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	294496	294951	.	+	.	ID=gene298;Name=YPD4_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01495;old_locus_tag=YPD4_0262
NC_017154.1	Protein Homology	CDS	294496	294951	.	+	0	ID=cds294;Parent=gene298;Dbxref=Genbank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209076.1;transl_table=11
NC_017154.1	RefSeq	gene	294973	296010	.	+	.	ID=gene299;Name=YPD4_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01500;old_locus_tag=YPD4_0263
NC_017154.1	Protein Homology	CDS	294973	296010	.	+	0	ID=cds295;Parent=gene299;Dbxref=Genbank:WP_002209077.1;Name=WP_002209077.1;gbkey=CDS;product=tellurium resistance protein TerC;protein_id=WP_002209077.1;transl_table=11
NC_017154.1	RefSeq	gene	296074	296652	.	+	.	ID=gene300;Name=YPD4_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01505;old_locus_tag=YPD4_0264
NC_017154.1	Protein Homology	CDS	296074	296652	.	+	0	ID=cds296;Parent=gene300;Dbxref=Genbank:WP_002209078.1;Name=WP_002209078.1;gbkey=CDS;product=chemical-damaging agent resistance protein C;protein_id=WP_002209078.1;transl_table=11
NC_017154.1	RefSeq	gene	296836	297411	.	+	.	ID=gene301;Name=YPD4_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01510;old_locus_tag=YPD4_0265
NC_017154.1	Protein Homology	CDS	296836	297411	.	+	0	ID=cds297;Parent=gene301;Dbxref=Genbank:WP_002209079.1;Name=WP_002209079.1;gbkey=CDS;product=tellurium resistance protein TerE;protein_id=WP_002209079.1;transl_table=11
NC_017154.1	RefSeq	gene	298124	298762	.	+	.	ID=gene302;Name=YPD4_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01515;old_locus_tag=YPD4_0266
NC_017154.1	Protein Homology	CDS	298124	298762	.	+	0	ID=cds298;Parent=gene302;Dbxref=Genbank:WP_002209080.1;Name=WP_002209080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209080.1;transl_table=11
NC_017154.1	RefSeq	gene	299013	301391	.	+	.	ID=gene303;Name=YPD4_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01520;old_locus_tag=YPD4_0267
NC_017154.1	Protein Homology	CDS	299013	301391	.	+	0	ID=cds299;Parent=gene303;Dbxref=Genbank:WP_002209081.1;Name=WP_002209081.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209081.1;transl_table=11
NC_017154.1	RefSeq	gene	301463	302206	.	+	.	ID=gene304;Name=YPD4_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01525;old_locus_tag=YPD4_0268
NC_017154.1	Protein Homology	CDS	301463	302206	.	+	0	ID=cds300;Parent=gene304;Dbxref=Genbank:WP_002209082.1;Name=WP_002209082.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209082.1;transl_table=11
NC_017154.1	RefSeq	gene	302217	302471	.	+	.	ID=gene305;Name=YPD4_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01530
NC_017154.1	Protein Homology	CDS	302217	302471	.	+	0	ID=cds301;Parent=gene305;Dbxref=Genbank:WP_002214631.1;Name=WP_002214631.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214631.1;transl_table=11
NC_017154.1	RefSeq	gene	303664	304983	.	+	.	ID=gene306;Name=YPD4_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01535;old_locus_tag=YPD4_0269
NC_017154.1	Protein Homology	CDS	303664	304983	.	+	0	ID=cds302;Parent=gene306;Dbxref=Genbank:WP_002214633.1;Name=WP_002214633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214633.1;transl_table=11
NC_017154.1	RefSeq	gene	305500	305703	.	+	.	ID=gene307;Name=YPD4_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01540
NC_017154.1	Protein Homology	CDS	305500	305703	.	+	0	ID=cds303;Parent=gene307;Dbxref=Genbank:WP_002228683.1;Name=WP_002228683.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228683.1;transl_table=11
NC_017154.1	RefSeq	gene	305992	308049	.	+	.	ID=gene308;Name=YPD4_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01545;old_locus_tag=YPD4_0270
NC_017154.1	Protein Homology	CDS	305992	308049	.	+	0	ID=cds304;Parent=gene308;Dbxref=Genbank:WP_002209085.1;Name=WP_002209085.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002209085.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	308072	308246	.	+	.	ID=id16;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	308385	310523	.	+	.	ID=id17;gbkey=repeat_region
NC_017154.1	RefSeq	gene	308393	312202	.	-	.	ID=gene309;Name=YPD4_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01550;old_locus_tag=YPD4_0271
NC_017154.1	Protein Homology	CDS	308393	312202	.	-	0	ID=cds305;Parent=gene309;Dbxref=Genbank:WP_002221634.1;Name=WP_002221634.1;gbkey=CDS;product=autotransporter;protein_id=WP_002221634.1;transl_table=11
NC_017154.1	RefSeq	gene	313034	313558	.	+	.	ID=gene310;Name=YPD4_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01555;old_locus_tag=YPD4_0272
NC_017154.1	Protein Homology	CDS	313034	313558	.	+	0	ID=cds306;Parent=gene310;Dbxref=Genbank:WP_002209087.1;Name=WP_002209087.1;gbkey=CDS;product=Chorismate pyruvate-lyase;protein_id=WP_002209087.1;transl_table=11
NC_017154.1	RefSeq	gene	313724	314590	.	+	.	ID=gene311;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=YPD4_RS01560;old_locus_tag=YPD4_0273
NC_017154.1	Protein Homology	CDS	313724	314590	.	+	0	ID=cds307;Parent=gene311;Dbxref=Genbank:WP_002209088.1;Name=WP_002209088.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_002209088.1;transl_table=11
NC_017154.1	RefSeq	gene	314771	317248	.	-	.	ID=gene312;Name=YPD4_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01565;old_locus_tag=YPD4_0274
NC_017154.1	Protein Homology	CDS	314771	317248	.	-	0	ID=cds308;Parent=gene312;Dbxref=Genbank:WP_002214644.1;Name=WP_002214644.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002214644.1;transl_table=11
NC_017154.1	RefSeq	gene	317376	317747	.	+	.	ID=gene313;Name=YPD4_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01570;old_locus_tag=YPD4_0275
NC_017154.1	Protein Homology	CDS	317376	317747	.	+	0	ID=cds309;Parent=gene313;Dbxref=Genbank:WP_002209089.1;Name=WP_002209089.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11
NC_017154.1	RefSeq	gene	317872	318480	.	+	.	ID=gene314;Name=YPD4_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01575;old_locus_tag=YPD4_0276
NC_017154.1	Protein Homology	CDS	317872	318480	.	+	0	ID=cds310;Parent=gene314;Dbxref=Genbank:WP_002209090.1;Name=WP_002209090.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_002209090.1;transl_table=11
NC_017154.1	RefSeq	gene	318682	319191	.	-	.	ID=gene315;Name=YPD4_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01580;old_locus_tag=YPD4_0277
NC_017154.1	Protein Homology	CDS	318682	319191	.	-	0	ID=cds311;Parent=gene315;Dbxref=Genbank:WP_002214647.1;Name=WP_002214647.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214647.1;transl_table=11
NC_017154.1	RefSeq	gene	319446	320483	.	+	.	ID=gene316;Name=YPD4_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01585;old_locus_tag=YPD4_0278
NC_017154.1	Protein Homology	CDS	319446	320483	.	+	0	ID=cds312;Parent=gene316;Dbxref=Genbank:WP_002209092.1;Name=WP_002209092.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_002209092.1;transl_table=11
NC_017154.1	RefSeq	gene	321008	321226	.	+	.	ID=gene317;Name=YPD4_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01590
NC_017154.1	Protein Homology	CDS	321008	321226	.	+	0	ID=cds313;Parent=gene317;Dbxref=Genbank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002209093.1;transl_table=11
NC_017154.1	RefSeq	gene	321571	322554	.	-	.	ID=gene318;Name=YPD4_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01595;old_locus_tag=YPD4_0279
NC_017154.1	Protein Homology	CDS	321571	322554	.	-	0	ID=cds314;Parent=gene318;Dbxref=Genbank:WP_002209094.1;Name=WP_002209094.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002209094.1;transl_table=11
NC_017154.1	RefSeq	gene	322886	324292	.	+	.	ID=gene319;Name=YPD4_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01600;old_locus_tag=YPD4_0280
NC_017154.1	Protein Homology	CDS	322886	324292	.	+	0	ID=cds315;Parent=gene319;Dbxref=Genbank:WP_002209095.1;Name=WP_002209095.1;Note=unwinds double stranded DNA;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11
NC_017154.1	RefSeq	gene	324389	325468	.	+	.	ID=gene320;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YPD4_RS01605;old_locus_tag=YPD4_0281
NC_017154.1	Protein Homology	CDS	324389	325468	.	+	0	ID=cds316;Parent=gene320;Dbxref=Genbank:WP_002209096.1;Name=WP_002209096.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=WP_002209096.1;transl_table=11
NC_017154.1	RefSeq	gene	325654	326847	.	+	.	ID=gene321;Name=YPD4_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01610;old_locus_tag=YPD4_0282
NC_017154.1	Protein Homology	CDS	325654	326847	.	+	0	ID=cds317;Parent=gene321;Dbxref=Genbank:WP_002209097.1;Name=WP_002209097.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002209097.1;transl_table=11
NC_017154.1	RefSeq	gene	327374	327733	.	+	.	ID=gene322;Name=YPD4_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01615;old_locus_tag=YPD4_0283
NC_017154.1	Protein Homology	CDS	327374	327733	.	+	0	ID=cds318;Parent=gene322;Dbxref=Genbank:WP_002209098.1;Name=WP_002209098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209098.1;transl_table=11
NC_017154.1	RefSeq	gene	327826	330669	.	-	.	ID=gene323;Name=YPD4_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01620;old_locus_tag=YPD4_0284
NC_017154.1	Protein Homology	CDS	327826	330669	.	-	0	ID=cds319;Parent=gene323;Dbxref=Genbank:WP_002209099.1;Name=WP_002209099.1;gbkey=CDS;product=UvrABC system protein A;protein_id=WP_002209099.1;transl_table=11
NC_017154.1	RefSeq	gene	331127	331675	.	+	.	ID=gene324;Name=YPD4_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01625;old_locus_tag=YPD4_0285
NC_017154.1	Protein Homology	CDS	331127	331675	.	+	0	ID=cds320;Parent=gene324;Dbxref=Genbank:WP_002209100.1;Name=WP_002209100.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_002209100.1;transl_table=11
NC_017154.1	RefSeq	gene	331921	332235	.	-	.	ID=gene325;Name=YPD4_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01630;old_locus_tag=YPD4_0286
NC_017154.1	Protein Homology	CDS	331921	332235	.	-	0	ID=cds321;Parent=gene325;Dbxref=Genbank:WP_002209101.1;Name=WP_002209101.1;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11
NC_017154.1	RefSeq	gene	332249	333397	.	-	.	ID=gene326;Name=YPD4_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01635;old_locus_tag=YPD4_0287
NC_017154.1	Protein Homology	CDS	332249	333397	.	-	0	ID=cds322;Parent=gene326;Dbxref=Genbank:WP_002209102.1;Name=WP_002209102.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_002209102.1;transl_table=11
NC_017154.1	RefSeq	gene	333464	334288	.	-	.	ID=gene327;Name=YPD4_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01640;old_locus_tag=YPD4_0288
NC_017154.1	Protein Homology	CDS	333464	334288	.	-	0	ID=cds323;Parent=gene327;Dbxref=Genbank:WP_002209103.1;Name=WP_002209103.1;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=WP_002209103.1;transl_table=11
NC_017154.1	RefSeq	gene	334301	335558	.	-	.	ID=gene328;Name=YPD4_RS01645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS01645;old_locus_tag=YPD4_0289;pseudo=true
NC_017154.1	Protein Homology	CDS	334301	335558	.	-	0	ID=cds324;Parent=gene328;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar isomerase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	335555	337012	.	-	.	ID=gene329;Name=YPD4_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01650;old_locus_tag=YPD4_0290
NC_017154.1	Protein Homology	CDS	335555	337012	.	-	0	ID=cds325;Parent=gene329;Dbxref=Genbank:WP_002209105.1;Name=WP_002209105.1;gbkey=CDS;product=rhamnulokinase;protein_id=WP_002209105.1;transl_table=11
NC_017154.1	RefSeq	gene	337011	337217	.	+	.	ID=gene330;Name=YPD4_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01655
NC_017154.1	Protein Homology	CDS	337011	337217	.	+	0	ID=cds326;Parent=gene330;Dbxref=Genbank:WP_002209106.1;Name=WP_002209106.1;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_002209106.1;transl_table=11
NC_017154.1	RefSeq	gene	337214	337357	.	+	.	ID=gene331;Name=YPD4_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01660
NC_017154.1	Protein Homology	CDS	337214	337357	.	+	0	ID=cds327;Parent=gene331;Dbxref=Genbank:WP_002209107.1;Name=WP_002209107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209107.1;transl_table=11
NC_017154.1	RefSeq	gene	337439	338260	.	+	.	ID=gene332;Name=YPD4_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01665;old_locus_tag=YPD4_0291
NC_017154.1	Protein Homology	CDS	337439	338260	.	+	0	ID=cds328;Parent=gene332;Dbxref=Genbank:WP_002209108.1;Name=WP_002209108.1;gbkey=CDS;product=transcriptional activator RhaS;protein_id=WP_002209108.1;transl_table=11
NC_017154.1	RefSeq	gene	338393	339265	.	+	.	ID=gene333;Name=YPD4_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01670;old_locus_tag=YPD4_0292
NC_017154.1	Protein Homology	CDS	338393	339265	.	+	0	ID=cds329;Parent=gene333;Dbxref=Genbank:WP_002209110.1;Name=WP_002209110.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;product=HTH-type transcriptional activator RhaR;protein_id=WP_002209110.1;transl_table=11
NC_017154.1	RefSeq	gene	339414	340448	.	-	.	ID=gene334;Name=YPD4_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01675;old_locus_tag=YPD4_0293
NC_017154.1	Protein Homology	CDS	339414	340448	.	-	0	ID=cds330;Parent=gene334;Dbxref=Genbank:WP_002209111.1;Name=WP_002209111.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=l-rhamnose-proton symporter;protein_id=WP_002209111.1;transl_table=11
NC_017154.1	RefSeq	gene	340602	340868	.	+	.	ID=gene335;Name=YPD4_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01680
NC_017154.1	Protein Homology	CDS	340602	340868	.	+	0	ID=cds331;Parent=gene335;Dbxref=Genbank:WP_002217947.1;Name=WP_002217947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217947.1;transl_table=11
NC_017154.1	RefSeq	gene	341304	341729	.	-	.	ID=gene336;Name=YPD4_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01685;old_locus_tag=YPD4_0294
NC_017154.1	Protein Homology	CDS	341304	341729	.	-	0	ID=cds332;Parent=gene336;Dbxref=Genbank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;product=subtilase;protein_id=WP_002209112.1;transl_table=11
NC_017154.1	RefSeq	gene	341959	342126	.	+	.	ID=gene337;Name=YPD4_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01690
NC_017154.1	Protein Homology	CDS	341959	342126	.	+	0	ID=cds333;Parent=gene337;Dbxref=Genbank:WP_002209114.1;Name=WP_002209114.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209114.1;transl_table=11
NC_017154.1	RefSeq	gene	342156	344711	.	+	.	ID=gene338;Name=YPD4_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01695;old_locus_tag=YPD4_0295
NC_017154.1	Protein Homology	CDS	342156	344711	.	+	0	ID=cds334;Parent=gene338;Dbxref=Genbank:WP_002209115.1;Name=WP_002209115.1;gbkey=CDS;product=viral enhancin protein;protein_id=WP_002209115.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	345140	345243	.	+	.	ID=id18;gbkey=repeat_region
NC_017154.1	RefSeq	gene	345145	345220	.	-	.	ID=gene339;Name=YPD4_RS01700;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS01700;old_locus_tag=YPD4_t2
NC_017154.1	tRNAscan-SE	tRNA	345145	345220	.	-	.	ID=rna4;Parent=gene339;anticodon=(pos:complement(345185..345187));gbkey=tRNA;product=tRNA-Phe
NC_017154.1	tRNAscan-SE	exon	345145	345220	.	-	.	ID=id19;Parent=rna4;anticodon=(pos:complement(345185..345187));gbkey=tRNA;product=tRNA-Phe
NC_017154.1	RefSeq	gene	345365	345940	.	-	.	ID=gene340;Name=YPD4_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01705;old_locus_tag=YPD4_0296
NC_017154.1	Protein Homology	CDS	345365	345940	.	-	0	ID=cds335;Parent=gene340;Dbxref=Genbank:WP_002209117.1;Name=WP_002209117.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11
NC_017154.1	RefSeq	gene	346360	348375	.	+	.	ID=gene341;Name=YPD4_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01710;old_locus_tag=YPD4_0297
NC_017154.1	Protein Homology	CDS	346360	348375	.	+	0	ID=cds336;Parent=gene341;Dbxref=Genbank:WP_002209118.1;Name=WP_002209118.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=oxidoreductase Fe-S-binding subunit;protein_id=WP_002209118.1;transl_table=11
NC_017154.1	RefSeq	gene	348398	348955	.	+	.	ID=gene342;Name=YPD4_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01715;old_locus_tag=YPD4_0298
NC_017154.1	Protein Homology	CDS	348398	348955	.	+	0	ID=cds337;Parent=gene342;Dbxref=Genbank:WP_002209119.1;Name=WP_002209119.1;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209119.1;transl_table=11
NC_017154.1	RefSeq	gene	348978	351125	.	+	.	ID=gene343;Name=YPD4_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01720;old_locus_tag=YPD4_0299
NC_017154.1	Protein Homology	CDS	348978	351125	.	+	0	ID=cds338;Parent=gene343;Dbxref=Genbank:WP_002209120.1;Name=WP_002209120.1;Note=selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate;gbkey=CDS;product=formate dehydrogenase;protein_id=WP_002209120.1;transl_table=11
NC_017154.1	RefSeq	gene	351187	352974	.	-	.	ID=gene344;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=YPD4_RS01725;old_locus_tag=YPD4_0300
NC_017154.1	Protein Homology	CDS	351187	352974	.	-	0	ID=cds339;Parent=gene344;Dbxref=Genbank:WP_002209121.1;Name=WP_002209121.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein DsbD;protein_id=WP_002209121.1;transl_table=11
NC_017154.1	RefSeq	gene	352950	353272	.	-	.	ID=gene345;Name=YPD4_RS01730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS01730;pseudo=true
NC_017154.1	Protein Homology	CDS	352950	353272	.	-	0	ID=cds340;Parent=gene345;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cation tolerance protein CutA;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	353493	354794	.	-	.	ID=gene346;Name=YPD4_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01735;old_locus_tag=YPD4_0301
NC_017154.1	Protein Homology	CDS	353493	354794	.	-	0	ID=cds341;Parent=gene346;Dbxref=Genbank:WP_002209123.1;Name=WP_002209123.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002209123.1;transl_table=11
NC_017154.1	RefSeq	gene	354914	356380	.	-	.	ID=gene347;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=YPD4_RS01740;old_locus_tag=YPD4_0302
NC_017154.1	Protein Homology	CDS	354914	356380	.	-	0	ID=cds342;Parent=gene347;Dbxref=Genbank:WP_044023325.1;Name=WP_044023325.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_044023325.1;transl_table=11
NC_017154.1	RefSeq	gene	356797	357375	.	+	.	ID=gene348;Name=YPD4_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01745;old_locus_tag=YPD4_0303
NC_017154.1	Protein Homology	CDS	356797	357375	.	+	0	ID=cds343;Parent=gene348;Dbxref=Genbank:WP_002209126.1;Name=WP_002209126.1;gbkey=CDS;product=exclusion suppressor FxsA;protein_id=WP_002209126.1;transl_table=11
NC_017154.1	RefSeq	gene	357630	357923	.	+	.	ID=gene349;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=YPD4_RS01750
NC_017154.1	Protein Homology	CDS	357630	357923	.	+	0	ID=cds344;Parent=gene349;Dbxref=Genbank:WP_002209127.1;Name=WP_002209127.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_002209127.1;transl_table=11
NC_017154.1	RefSeq	gene	357970	359616	.	+	.	ID=gene350;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=YPD4_RS01755;old_locus_tag=YPD4_0304
NC_017154.1	Protein Homology	CDS	357970	359616	.	+	0	ID=cds345;Parent=gene350;Dbxref=Genbank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_002209128.1;transl_table=11
NC_017154.1	RefSeq	gene	360240	360638	.	+	.	ID=gene351;Name=YPD4_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01760;old_locus_tag=YPD4_0305
NC_017154.1	Protein Homology	CDS	360240	360638	.	+	0	ID=cds346;Parent=gene351;Dbxref=Genbank:WP_002209129.1;Name=WP_002209129.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209129.1;transl_table=11
NC_017154.1	RefSeq	gene	360923	361951	.	-	.	ID=gene352;Name=YPD4_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01765;old_locus_tag=YPD4_0306
NC_017154.1	Protein Homology	CDS	360923	361951	.	-	0	ID=cds347;Parent=gene352;Dbxref=Genbank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11
NC_017154.1	RefSeq	gene	361987	362553	.	+	.	ID=gene353;Name=YPD4_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01770;old_locus_tag=YPD4_0307
NC_017154.1	Protein Homology	CDS	361987	362553	.	+	0	ID=cds348;Parent=gene353;Dbxref=Genbank:WP_002209131.1;Name=WP_002209131.1;gbkey=CDS;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11
NC_017154.1	RefSeq	gene	362800	363114	.	+	.	ID=gene354;Name=YPD4_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01775
NC_017154.1	Protein Homology	CDS	362800	363114	.	+	0	ID=cds349;Parent=gene354;Dbxref=Genbank:WP_002228124.1;Name=WP_002228124.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=WP_002228124.1;transl_table=11
NC_017154.1	RefSeq	gene	363279	363635	.	-	.	ID=gene355;Name=YPD4_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01780;old_locus_tag=YPD4_0309
NC_017154.1	Protein Homology	CDS	363279	363635	.	-	0	ID=cds350;Parent=gene355;Dbxref=Genbank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;product=fumarate reductase subunit D;protein_id=WP_002209134.1;transl_table=11
NC_017154.1	RefSeq	gene	363652	364044	.	-	.	ID=gene356;Name=YPD4_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01785;old_locus_tag=YPD4_0310
NC_017154.1	Protein Homology	CDS	363652	364044	.	-	0	ID=cds351;Parent=gene356;Dbxref=Genbank:WP_002209135.1;Name=WP_002209135.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase subunit C;protein_id=WP_002209135.1;transl_table=11
NC_017154.1	RefSeq	gene	364061	364795	.	-	.	ID=gene357;Name=YPD4_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01790;old_locus_tag=YPD4_0311
NC_017154.1	Protein Homology	CDS	364061	364795	.	-	0	ID=cds352;Parent=gene357;Dbxref=Genbank:WP_002209136.1;Name=WP_002209136.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11
NC_017154.1	RefSeq	gene	364788	366611	.	-	.	ID=gene358;Name=YPD4_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01795;old_locus_tag=YPD4_0312
NC_017154.1	Protein Homology	CDS	364788	366611	.	-	0	ID=cds353;Parent=gene358;Dbxref=Genbank:WP_002209137.1;Name=WP_002209137.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase flavoprotein subunit;protein_id=WP_002209137.1;transl_table=11
NC_017154.1	RefSeq	gene	366718	366909	.	+	.	ID=gene359;Name=YPD4_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01800
NC_017154.1	Protein Homology	CDS	366718	366909	.	+	0	ID=cds354;Parent=gene359;Dbxref=Genbank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209138.1;transl_table=11
NC_017154.1	RefSeq	gene	367069	368046	.	+	.	ID=gene360;Name=YPD4_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01805;old_locus_tag=YPD4_0313
NC_017154.1	Protein Homology	CDS	367069	368046	.	+	0	ID=cds355;Parent=gene360;Dbxref=Genbank:WP_002209139.1;Name=WP_002209139.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11
NC_017154.1	RefSeq	gene	368167	371508	.	-	.	ID=gene361;Name=YPD4_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01810;old_locus_tag=YPD4_0314
NC_017154.1	Protein Homology	CDS	368167	371508	.	-	0	ID=cds356;Parent=gene361;Dbxref=Genbank:WP_002209140.1;Name=WP_002209140.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_002209140.1;transl_table=11
NC_017154.1	RefSeq	gene	371550	372431	.	-	.	ID=gene362;Name=YPD4_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01815;old_locus_tag=YPD4_0315
NC_017154.1	Protein Homology	CDS	371550	372431	.	-	0	ID=cds357;Parent=gene362;Dbxref=Genbank:WP_002209141.1;Name=WP_002209141.1;gbkey=CDS;product=phosphatidylserine decarboxylase proenzyme;protein_id=WP_002209141.1;transl_table=11
NC_017154.1	RefSeq	gene	372756	373808	.	-	.	ID=gene363;Name=YPD4_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01820;old_locus_tag=YPD4_0316
NC_017154.1	Protein Homology	CDS	372756	373808	.	-	0	ID=cds358;Parent=gene363;Dbxref=Genbank:WP_002209142.1;Name=WP_002209142.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=GTPase RsgA;protein_id=WP_002209142.1;transl_table=11
NC_017154.1	RefSeq	gene	373815	374009	.	-	.	ID=gene364;Name=YPD4_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01825
NC_017154.1	Protein Homology	CDS	373815	374009	.	-	0	ID=cds359;Parent=gene364;Dbxref=Genbank:WP_015683799.1;Name=WP_015683799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683799.1;transl_table=11
NC_017154.1	RefSeq	gene	374008	374553	.	+	.	ID=gene365;Name=YPD4_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01830;old_locus_tag=YPD4_0317
NC_017154.1	Protein Homology	CDS	374008	374553	.	+	0	ID=cds360;Parent=gene365;Dbxref=Genbank:WP_002209143.1;Name=WP_002209143.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_002209143.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	374565	374907	.	+	.	ID=id20;gbkey=repeat_region
NC_017154.1	RefSeq	gene	375111	375186	.	+	.	ID=gene366;Name=YPD4_RS01840;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS01840;old_locus_tag=YPD4_t3
NC_017154.1	tRNAscan-SE	tRNA	375111	375186	.	+	.	ID=rna5;Parent=gene366;anticodon=(pos:375144..375146);gbkey=tRNA;product=tRNA-Gly
NC_017154.1	tRNAscan-SE	exon	375111	375186	.	+	.	ID=id21;Parent=rna5;anticodon=(pos:375144..375146);gbkey=tRNA;product=tRNA-Gly
NC_017154.1	RefSeq	gene	375278	375353	.	+	.	ID=gene367;Name=YPD4_RS01845;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS01845;old_locus_tag=YPD4_t4
NC_017154.1	tRNAscan-SE	tRNA	375278	375353	.	+	.	ID=rna6;Parent=gene367;anticodon=(pos:375311..375313);gbkey=tRNA;product=tRNA-Gly
NC_017154.1	tRNAscan-SE	exon	375278	375353	.	+	.	ID=id22;Parent=rna6;anticodon=(pos:375311..375313);gbkey=tRNA;product=tRNA-Gly
NC_017154.1	RefSeq	gene	375665	376900	.	-	.	ID=gene368;Name=YPD4_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01850;old_locus_tag=YPD4_0318
NC_017154.1	Protein Homology	CDS	375665	376900	.	-	0	ID=cds361;Parent=gene368;Dbxref=Genbank:WP_002209144.1;Name=WP_002209144.1;gbkey=CDS;product=epoxyqueuosine reductase;protein_id=WP_002209144.1;transl_table=11
NC_017154.1	RefSeq	gene	376899	378413	.	+	.	ID=gene369;Name=YPD4_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01855;old_locus_tag=YPD4_0319
NC_017154.1	Protein Homology	CDS	376899	378413	.	+	0	ID=cds362;Parent=gene369;Dbxref=Genbank:WP_002209145.1;Name=WP_002209145.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002209145.1;transl_table=11
NC_017154.1	RefSeq	gene	378424	378894	.	+	.	ID=gene370;Name=YPD4_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01860;old_locus_tag=YPD4_0320
NC_017154.1	Protein Homology	CDS	378424	378894	.	+	0	ID=cds363;Parent=gene370;Dbxref=Genbank:WP_002209146.1;Name=WP_002209146.1;Note=needed for nucleoid integrity%3B possibly involved in cell wall synthesis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_002209146.1;transl_table=11
NC_017154.1	RefSeq	gene	378902	380815	.	+	.	ID=gene371;Name=YPD4_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01865;old_locus_tag=YPD4_0321
NC_017154.1	Protein Homology	CDS	378902	380815	.	+	0	ID=cds364;Parent=gene371;Dbxref=Genbank:WP_002232017.1;Name=WP_002232017.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002232017.1;transl_table=11
NC_017154.1	RefSeq	gene	380831	382738	.	+	.	ID=gene372;Name=YPD4_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01870;old_locus_tag=YPD4_0322
NC_017154.1	Protein Homology	CDS	380831	382738	.	+	0	ID=cds365;Parent=gene372;Dbxref=Genbank:WP_002209148.1;Name=WP_002209148.1;gbkey=CDS;product=DNA mismatch repair protein MutL;protein_id=WP_002209148.1;transl_table=11
NC_017154.1	RefSeq	gene	382731	383672	.	+	.	ID=gene373;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=YPD4_RS01875;old_locus_tag=YPD4_0323
NC_017154.1	Protein Homology	CDS	382731	383672	.	+	0	ID=cds366;Parent=gene373;Dbxref=Genbank:WP_002209149.1;Name=WP_002209149.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_002209149.1;transl_table=11
NC_017154.1	RefSeq	gene	383788	384093	.	+	.	ID=gene374;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=YPD4_RS01880;old_locus_tag=YPD4_0324
NC_017154.1	Protein Homology	CDS	383788	384093	.	+	0	ID=cds367;Parent=gene374;Dbxref=Genbank:WP_002209151.1;Name=WP_002209151.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11
NC_017154.1	RefSeq	gene	384192	385478	.	+	.	ID=gene375;Name=YPD4_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01885;old_locus_tag=YPD4_0325
NC_017154.1	Protein Homology	CDS	384192	385478	.	+	0	ID=cds368;Parent=gene375;Dbxref=Genbank:WP_002209152.1;Name=WP_002209152.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_002209152.1;transl_table=11
NC_017154.1	RefSeq	gene	385719	386978	.	+	.	ID=gene376;Name=YPD4_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01890;old_locus_tag=YPD4_0326
NC_017154.1	Protein Homology	CDS	385719	386978	.	+	0	ID=cds369;Parent=gene376;Dbxref=Genbank:WP_002209154.1;Name=WP_002209154.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209154.1;transl_table=11
NC_017154.1	RefSeq	gene	386982	387986	.	+	.	ID=gene377;Name=YPD4_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01895;old_locus_tag=YPD4_0327
NC_017154.1	Protein Homology	CDS	386982	387986	.	+	0	ID=cds370;Parent=gene377;Dbxref=Genbank:WP_002209155.1;Name=WP_002209155.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209155.1;transl_table=11
NC_017154.1	RefSeq	gene	388158	388358	.	+	.	ID=gene378;Name=YPD4_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01900
NC_017154.1	Protein Homology	CDS	388158	388358	.	+	0	ID=cds371;Parent=gene378;Dbxref=Genbank:WP_002217227.1;Name=WP_002217227.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217227.1;transl_table=11
NC_017154.1	RefSeq	gene	388458	389756	.	+	.	ID=gene379;Name=YPD4_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01905;old_locus_tag=YPD4_0328
NC_017154.1	Protein Homology	CDS	388458	389756	.	+	0	ID=cds372;Parent=gene379;Dbxref=Genbank:WP_002209157.1;Name=WP_002209157.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_002209157.1;transl_table=11
NC_017154.1	RefSeq	gene	390125	390550	.	+	.	ID=gene380;Name=YPD4_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01910;old_locus_tag=YPD4_0329
NC_017154.1	Protein Homology	CDS	390125	390550	.	+	0	ID=cds373;Parent=gene380;Dbxref=Genbank:WP_002217229.1;Name=WP_002217229.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002217229.1;transl_table=11
NC_017154.1	RefSeq	gene	390791	393324	.	+	.	ID=gene381;Name=YPD4_RS01915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS01915;pseudo=true
NC_017154.1	Protein Homology	CDS	390791	393324	.	+	0	ID=cds374;Parent=gene381;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;exception=annotated by transcript or proteomic data;gbkey=CDS;product=exoribonuclease R;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	393443	394183	.	+	.	ID=gene382;Name=YPD4_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01920;old_locus_tag=YPD4_0332
NC_017154.1	Protein Homology	CDS	393443	394183	.	+	0	ID=cds375;Parent=gene382;Dbxref=Genbank:WP_002209161.1;Name=WP_002209161.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11
NC_017154.1	RefSeq	gene	394413	396044	.	+	.	ID=gene383;Name=YPD4_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01925;old_locus_tag=YPD4_0333
NC_017154.1	Protein Homology	CDS	394413	396044	.	+	0	ID=cds376;Parent=gene383;Dbxref=Genbank:WP_002353634.1;Name=WP_002353634.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;product=isovaleryl CoA dehydrogenase;protein_id=WP_002353634.1;transl_table=11
NC_017154.1	RefSeq	gene	396116	396427	.	-	.	ID=gene384;Name=YPD4_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01930;old_locus_tag=YPD4_0334
NC_017154.1	Protein Homology	CDS	396116	396427	.	-	0	ID=cds377;Parent=gene384;Dbxref=Genbank:WP_002215294.1;Name=WP_002215294.1;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;gbkey=CDS;product=transporter;protein_id=WP_002215294.1;transl_table=11
NC_017154.1	RefSeq	gene	396618	396716	.	+	.	ID=gene385;Name=YPD4_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01935
NC_017154.1	Protein Homology	CDS	396618	396716	.	+	0	ID=cds378;Parent=gene385;Dbxref=Genbank:WP_002215296.1;Name=WP_002215296.1;gbkey=CDS;product=phospholipase;protein_id=WP_002215296.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	396696	398656	.	+	.	ID=id23;gbkey=repeat_region
NC_017154.1	RefSeq	gene	396767	397546	.	-	.	ID=gene386;Name=YPD4_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01940;old_locus_tag=YPD4_0335
NC_017154.1	Protein Homology	CDS	396767	397546	.	-	0	ID=cds379;Parent=gene386;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	397596	398567	.	-	.	ID=gene387;Name=YPD4_RS01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS01945;old_locus_tag=YPD4_0336;partial=true;pseudo=true;start_range=.,397596
NC_017154.1	Protein Homology	CDS	397596	398567	.	-	0	ID=cds380;Parent=gene387;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=transposase;pseudo=true;start_range=.,397596;transl_table=11
NC_017154.1	RefSeq	gene	398701	400764	.	+	.	ID=gene388;Name=YPD4_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01950;old_locus_tag=YPD4_0337
NC_017154.1	Protein Homology	CDS	398701	400764	.	+	0	ID=cds381;Parent=gene388;Dbxref=Genbank:WP_002209166.1;Name=WP_002209166.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209166.1;transl_table=11
NC_017154.1	RefSeq	gene	400761	402077	.	+	.	ID=gene389;Name=YPD4_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01955;old_locus_tag=YPD4_0338
NC_017154.1	Protein Homology	CDS	400761	402077	.	+	0	ID=cds382;Parent=gene389;Dbxref=Genbank:WP_002209167.1;Name=WP_002209167.1;gbkey=CDS;product=mcrBC 5-methylcytosine restriction system component family protein;protein_id=WP_002209167.1;transl_table=11
NC_017154.1	RefSeq	gene	402144	402374	.	+	.	ID=gene390;Name=YPD4_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01960
NC_017154.1	Protein Homology	CDS	402144	402374	.	+	0	ID=cds383;Parent=gene390;Dbxref=Genbank:WP_002215297.1;Name=WP_002215297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215297.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	402268	402480	.	+	.	ID=id24;gbkey=repeat_region
NC_017154.1	RefSeq	gene	402699	402962	.	-	.	ID=gene391;Name=YPD4_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01965
NC_017154.1	Protein Homology	CDS	402699	402962	.	-	0	ID=cds384;Parent=gene391;Dbxref=Genbank:WP_002209168.1;Name=WP_002209168.1;gbkey=CDS;product=transposase;protein_id=WP_002209168.1;transl_table=11
NC_017154.1	RefSeq	gene	403101	404426	.	+	.	ID=gene392;Name=YPD4_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01970;old_locus_tag=YPD4_0339
NC_017154.1	Protein Homology	CDS	403101	404426	.	+	0	ID=cds385;Parent=gene392;Dbxref=Genbank:WP_002209169.1;Name=WP_002209169.1;gbkey=CDS;product=restriction endonuclease subunit M;protein_id=WP_002209169.1;transl_table=11
NC_017154.1	RefSeq	gene	404476	405198	.	+	.	ID=gene393;Name=YPD4_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01975;old_locus_tag=YPD4_0340
NC_017154.1	Protein Homology	CDS	404476	405198	.	+	0	ID=cds386;Parent=gene393;Dbxref=Genbank:WP_002209170.1;Name=WP_002209170.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209170.1;transl_table=11
NC_017154.1	RefSeq	gene	405170	406543	.	+	.	ID=gene394;Name=YPD4_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01980;old_locus_tag=YPD4_0341
NC_017154.1	Protein Homology	CDS	405170	406543	.	+	0	ID=cds387;Parent=gene394;Dbxref=Genbank:WP_002209171.1;Name=WP_002209171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209171.1;transl_table=11
NC_017154.1	RefSeq	gene	406887	407174	.	-	.	ID=gene395;Name=YPD4_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01985
NC_017154.1	Protein Homology	CDS	406887	407174	.	-	0	ID=cds388;Parent=gene395;Dbxref=Genbank:WP_002215301.1;Name=WP_002215301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215301.1;transl_table=11
NC_017154.1	RefSeq	gene	407376	407573	.	-	.	ID=gene396;Name=YPD4_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01990
NC_017154.1	Protein Homology	CDS	407376	407573	.	-	0	ID=cds389;Parent=gene396;Dbxref=Genbank:WP_002209172.1;Name=WP_002209172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209172.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	407512	407674	.	+	.	ID=id25;gbkey=repeat_region
NC_017154.1	RefSeq	gene	407614	407709	.	+	.	ID=gene397;Name=YPD4_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS01995
NC_017154.1	Protein Homology	CDS	407614	407709	.	+	0	ID=cds390;Parent=gene397;Dbxref=Genbank:WP_002215302.1;Name=WP_002215302.1;gbkey=CDS;product=transposase;protein_id=WP_002215302.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	407689	407851	.	+	.	ID=id26;gbkey=repeat_region
NC_017154.1	RefSeq	gene	407815	409203	.	+	.	ID=gene398;Name=YPD4_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02000;old_locus_tag=YPD4_0342
NC_017154.1	Protein Homology	CDS	407815	409203	.	+	0	ID=cds391;Parent=gene398;Dbxref=Genbank:WP_002209173.1;Name=WP_002209173.1;gbkey=CDS;product=ATPase involved in DNA repair;protein_id=WP_002209173.1;transl_table=11
NC_017154.1	RefSeq	gene	409200	410354	.	+	.	ID=gene399;Name=YPD4_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02005;old_locus_tag=YPD4_0343
NC_017154.1	Protein Homology	CDS	409200	410354	.	+	0	ID=cds392;Parent=gene399;Dbxref=Genbank:WP_002209174.1;Name=WP_002209174.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209174.1;transl_table=11
NC_017154.1	RefSeq	gene	410366	410491	.	-	.	ID=gene400;Name=YPD4_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02010
NC_017154.1	Protein Homology	CDS	410366	410491	.	-	0	ID=cds393;Parent=gene400;Dbxref=Genbank:WP_002209175.1;Name=WP_002209175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209175.1;transl_table=11
NC_017154.1	RefSeq	gene	410500	411546	.	-	.	ID=gene401;Name=YPD4_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02015;old_locus_tag=YPD4_0344
NC_017154.1	Protein Homology	CDS	410500	411546	.	-	0	ID=cds394;Parent=gene401;Dbxref=Genbank:WP_002209176.1;Name=WP_002209176.1;gbkey=CDS;product=peptidase M48;protein_id=WP_002209176.1;transl_table=11
NC_017154.1	RefSeq	gene	411557	412753	.	-	.	ID=gene402;Name=YPD4_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02020;old_locus_tag=YPD4_0345
NC_017154.1	Protein Homology	CDS	411557	412753	.	-	0	ID=cds395;Parent=gene402;Dbxref=Genbank:WP_002209177.1;Name=WP_002209177.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209177.1;transl_table=11
NC_017154.1	RefSeq	gene	413459	413995	.	+	.	ID=gene403;Name=YPD4_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02025;old_locus_tag=YPD4_0346
NC_017154.1	Protein Homology	CDS	413459	413995	.	+	0	ID=cds396;Parent=gene403;Dbxref=Genbank:WP_002209178.1;Name=WP_002209178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209178.1;transl_table=11
NC_017154.1	RefSeq	gene	413997	414872	.	+	.	ID=gene404;Name=YPD4_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02030;old_locus_tag=YPD4_0347
NC_017154.1	Protein Homology	CDS	413997	414872	.	+	0	ID=cds397;Parent=gene404;Dbxref=Genbank:WP_002209179.1;Name=WP_002209179.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209179.1;transl_table=11
NC_017154.1	RefSeq	gene	414865	415209	.	-	.	ID=gene405;Name=YPD4_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02035;old_locus_tag=YPD4_0348
NC_017154.1	Protein Homology	CDS	414865	415209	.	-	0	ID=cds398;Parent=gene405;Dbxref=Genbank:WP_002209180.1;Name=WP_002209180.1;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209180.1;transl_table=11
NC_017154.1	RefSeq	gene	415302	415622	.	-	.	ID=gene406;Name=YPD4_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02040;old_locus_tag=YPD4_0349
NC_017154.1	Protein Homology	CDS	415302	415622	.	-	0	ID=cds399;Parent=gene406;Dbxref=Genbank:WP_002209181.1;Name=WP_002209181.1;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209181.1;transl_table=11
NC_017154.1	RefSeq	gene	415963	417045	.	-	.	ID=gene407;Name=YPD4_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02045;old_locus_tag=YPD4_0350
NC_017154.1	Protein Homology	CDS	415963	417045	.	-	0	ID=cds400;Parent=gene407;Dbxref=Genbank:WP_002209182.1;Name=WP_002209182.1;gbkey=CDS;product=PTS fructose transporter subunit IIC;protein_id=WP_002209182.1;transl_table=11
NC_017154.1	RefSeq	gene	417410	419968	.	+	.	ID=gene408;Name=YPD4_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02050;old_locus_tag=YPD4_0351
NC_017154.1	Protein Homology	CDS	417410	419968	.	+	0	ID=cds401;Parent=gene408;Dbxref=Genbank:WP_002228120.1;Name=WP_002228120.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002228120.1;transl_table=11
NC_017154.1	RefSeq	gene	420030	420521	.	-	.	ID=gene409;Name=YPD4_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02055;old_locus_tag=YPD4_0352
NC_017154.1	Protein Homology	CDS	420030	420521	.	-	0	ID=cds402;Parent=gene409;Dbxref=Genbank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;product=glycoprotein/receptor precursor;protein_id=WP_002209184.1;transl_table=11
NC_017154.1	RefSeq	gene	420822	421112	.	-	.	ID=gene410;Name=YPD4_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02060
NC_017154.1	Protein Homology	CDS	420822	421112	.	-	0	ID=cds403;Parent=gene410;Dbxref=Genbank:WP_002209186.1;Name=WP_002209186.1;gbkey=CDS;product=autoinducer 2-degrading protein LsrG;protein_id=WP_002209186.1;transl_table=11
NC_017154.1	RefSeq	gene	421176	422051	.	-	.	ID=gene411;Name=YPD4_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02065;old_locus_tag=YPD4_0353
NC_017154.1	Protein Homology	CDS	421176	422051	.	-	0	ID=cds404;Parent=gene411;Dbxref=Genbank:WP_002209188.1;Name=WP_002209188.1;Note=involved in autoinducer 2 transport and processing;gbkey=CDS;product=aldolase;protein_id=WP_002209188.1;transl_table=11
NC_017154.1	RefSeq	gene	422107	423126	.	-	.	ID=gene412;Name=YPD4_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02070;old_locus_tag=YPD4_0354
NC_017154.1	Protein Homology	CDS	422107	423126	.	-	0	ID=cds405;Parent=gene412;Dbxref=Genbank:WP_002209189.1;Name=WP_002209189.1;Note=with lsrACD is involved in the transport of autoinducer 2 into the cell;gbkey=CDS;product=autoinducer 2-binding protein LsrB;protein_id=WP_002209189.1;transl_table=11
NC_017154.1	RefSeq	gene	423185	424186	.	-	.	ID=gene413;Name=YPD4_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02075;old_locus_tag=YPD4_0355
NC_017154.1	Protein Homology	CDS	423185	424186	.	-	0	ID=cds406;Parent=gene413;Dbxref=Genbank:WP_002209190.1;Name=WP_002209190.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;product=autoinducer 2 import system permease LsrD;protein_id=WP_002209190.1;transl_table=11
NC_017154.1	RefSeq	gene	424183	425238	.	-	.	ID=gene414;Name=YPD4_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02080;old_locus_tag=YPD4_0356
NC_017154.1	Protein Homology	CDS	424183	425238	.	-	0	ID=cds407;Parent=gene414;Dbxref=Genbank:WP_002209191.1;Name=WP_002209191.1;Note=with LsrADB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import system permease LsrC;protein_id=WP_002209191.1;transl_table=11
NC_017154.1	RefSeq	gene	425232	426815	.	-	.	ID=gene415;Name=YPD4_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02085;old_locus_tag=YPD4_0357
NC_017154.1	Protein Homology	CDS	425232	426815	.	-	0	ID=cds408;Parent=gene415;Dbxref=Genbank:WP_002209192.1;Name=WP_002209192.1;Note=with LsrCDB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=WP_002209192.1;transl_table=11
NC_017154.1	RefSeq	gene	426925	427131	.	-	.	ID=gene416;Name=YPD4_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02090
NC_017154.1	Protein Homology	CDS	426925	427131	.	-	0	ID=cds409;Parent=gene416;Dbxref=Genbank:WP_002221620.1;Name=WP_002221620.1;gbkey=CDS;product=membrane protein;protein_id=WP_002221620.1;transl_table=11
NC_017154.1	RefSeq	gene	427160	428147	.	+	.	ID=gene417;Name=YPD4_RS02095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS02095;pseudo=true
NC_017154.1	Protein Homology	CDS	427160	428147	.	+	0	ID=cds410;Parent=gene417;Note=regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator LsrR;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	428318	429910	.	+	.	ID=gene418;Name=YPD4_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02100;old_locus_tag=YPD4_0359
NC_017154.1	Protein Homology	CDS	428318	429910	.	+	0	ID=cds411;Parent=gene418;Dbxref=Genbank:WP_002209194.1;Name=WP_002209194.1;gbkey=CDS;product=autoinducer 2 kinase LsrK;protein_id=WP_002209194.1;transl_table=11
NC_017154.1	RefSeq	gene	430256	431419	.	+	.	ID=gene419;Name=YPD4_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02105;old_locus_tag=YPD4_0360
NC_017154.1	Protein Homology	CDS	430256	431419	.	+	0	ID=cds412;Parent=gene419;Dbxref=Genbank:WP_002209196.1;Name=WP_002209196.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002209196.1;transl_table=11
NC_017154.1	RefSeq	gene	431467	432699	.	+	.	ID=gene420;Name=YPD4_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02110;old_locus_tag=YPD4_0361
NC_017154.1	Protein Homology	CDS	431467	432699	.	+	0	ID=cds413;Parent=gene420;Dbxref=Genbank:WP_002209197.1;Name=WP_002209197.1;gbkey=CDS;product=O-antigen biosynthesis protein;protein_id=WP_002209197.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	432719	432887	.	+	.	ID=id27;gbkey=repeat_region
NC_017154.1	RefSeq	gene	433285	433482	.	+	.	ID=gene421;Name=YPD4_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22430
NC_017154.1	Protein Homology	CDS	433285	433482	.	+	0	ID=cds414;Parent=gene421;Dbxref=Genbank:WP_002215224.1;Name=WP_002215224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215224.1;transl_table=11
NC_017154.1	RefSeq	gene	433509	433742	.	+	.	ID=gene422;Name=YPD4_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02120
NC_017154.1	Protein Homology	CDS	433509	433742	.	+	0	ID=cds415;Parent=gene422;Dbxref=Genbank:WP_002209198.1;Name=WP_002209198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209198.1;transl_table=11
NC_017154.1	RefSeq	gene	433794	434876	.	+	.	ID=gene423;Name=YPD4_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02125;old_locus_tag=YPD4_0362
NC_017154.1	Protein Homology	CDS	433794	434876	.	+	0	ID=cds416;Parent=gene423;Dbxref=Genbank:WP_002209199.1;Name=WP_002209199.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209199.1;transl_table=11
NC_017154.1	RefSeq	gene	434876	437962	.	+	.	ID=gene424;Name=YPD4_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02130;old_locus_tag=YPD4_0363
NC_017154.1	Protein Homology	CDS	434876	437962	.	+	0	ID=cds417;Parent=gene424;Dbxref=Genbank:WP_002209200.1;Name=WP_002209200.1;gbkey=CDS;product=multidrug transporter AcrB;protein_id=WP_002209200.1;transl_table=11
NC_017154.1	RefSeq	gene	437998	438189	.	-	.	ID=gene425;Name=YPD4_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02135
NC_017154.1	Protein Homology	CDS	437998	438189	.	-	0	ID=cds418;Parent=gene425;Dbxref=Genbank:WP_002215226.1;Name=WP_002215226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215226.1;transl_table=11
NC_017154.1	RefSeq	gene	438323	438619	.	-	.	ID=gene426;Name=YPD4_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02140
NC_017154.1	Protein Homology	CDS	438323	438619	.	-	0	ID=cds419;Parent=gene426;Dbxref=Genbank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11
NC_017154.1	RefSeq	gene	438802	439125	.	-	.	ID=gene427;Name=YPD4_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02145
NC_017154.1	Protein Homology	CDS	438802	439125	.	-	0	ID=cds420;Parent=gene427;Dbxref=Genbank:WP_002353658.1;Name=WP_002353658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002353658.1;transl_table=11
NC_017154.1	RefSeq	gene	439458	440543	.	+	.	ID=gene428;Name=YPD4_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02150;old_locus_tag=YPD4_0364
NC_017154.1	Protein Homology	CDS	439458	440543	.	+	0	ID=cds421;Parent=gene428;Dbxref=Genbank:WP_002209202.1;Name=WP_002209202.1;gbkey=CDS;product=pectinesterase;protein_id=WP_002209202.1;transl_table=11
NC_017154.1	RefSeq	gene	441084	442256	.	-	.	ID=gene429;Name=YPD4_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02155;old_locus_tag=YPD4_0365
NC_017154.1	Protein Homology	CDS	441084	442256	.	-	0	ID=cds422;Parent=gene429;Dbxref=Genbank:WP_002209204.1;Name=WP_002209204.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209204.1;transl_table=11
NC_017154.1	RefSeq	gene	442505	442837	.	+	.	ID=gene430;Name=YPD4_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02160;old_locus_tag=YPD4_0366
NC_017154.1	Protein Homology	CDS	442505	442837	.	+	0	ID=cds423;Parent=gene430;Dbxref=Genbank:WP_002215232.1;Name=WP_002215232.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215232.1;transl_table=11
NC_017154.1	RefSeq	gene	443007	443093	.	-	.	ID=gene431;Name=YPD4_RS02165;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS02165;old_locus_tag=YPD4_t5
NC_017154.1	tRNAscan-SE	tRNA	443007	443093	.	-	.	ID=rna7;Parent=gene431;anticodon=(pos:complement(443057..443059));gbkey=tRNA;product=tRNA-Leu
NC_017154.1	tRNAscan-SE	exon	443007	443093	.	-	.	ID=id28;Parent=rna7;anticodon=(pos:complement(443057..443059));gbkey=tRNA;product=tRNA-Leu
NC_017154.1	RefSeq	gene	443350	444393	.	-	.	ID=gene432;Name=YPD4_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02170;old_locus_tag=YPD4_0367
NC_017154.1	Protein Homology	CDS	443350	444393	.	-	0	ID=cds424;Parent=gene432;Dbxref=Genbank:WP_002209206.1;Name=WP_002209206.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase C;protein_id=WP_002209206.1;transl_table=11
NC_017154.1	RefSeq	gene	444506	444943	.	+	.	ID=gene433;Name=YPD4_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02175;old_locus_tag=YPD4_0368
NC_017154.1	Protein Homology	CDS	444506	444943	.	+	0	ID=cds425;Parent=gene433;Dbxref=Genbank:WP_002209207.1;Name=WP_002209207.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_002209207.1;transl_table=11
NC_017154.1	RefSeq	gene	444888	445331	.	+	.	ID=gene434;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=YPD4_RS02180
NC_017154.1	Protein Homology	CDS	444888	445331	.	+	0	ID=cds426;Parent=gene434;Dbxref=Genbank:WP_002216075.1;Name=WP_002216075.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11
NC_017154.1	RefSeq	gene	445510	447099	.	+	.	ID=gene435;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=YPD4_RS02185;old_locus_tag=YPD4_0370
NC_017154.1	Protein Homology	CDS	445510	447099	.	+	0	ID=cds427;Parent=gene435;Dbxref=Genbank:WP_002209209.1;Name=WP_002209209.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_002209209.1;transl_table=11
NC_017154.1	RefSeq	gene	447426	448040	.	+	.	ID=gene436;Name=YPD4_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02190;old_locus_tag=YPD4_0371
NC_017154.1	Protein Homology	CDS	447426	448040	.	+	0	ID=cds428;Parent=gene436;Dbxref=Genbank:WP_002209210.1;Name=WP_002209210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209210.1;transl_table=11
NC_017154.1	RefSeq	gene	448207	448368	.	+	.	ID=gene437;Name=YPD4_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02195
NC_017154.1	Protein Homology	CDS	448207	448368	.	+	0	ID=cds429;Parent=gene437;Dbxref=Genbank:WP_002209211.1;Name=WP_002209211.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209211.1;transl_table=11
NC_017154.1	RefSeq	gene	448445	449713	.	+	.	ID=gene438;Name=YPD4_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02200;old_locus_tag=YPD4_0372
NC_017154.1	Protein Homology	CDS	448445	449713	.	+	0	ID=cds430;Parent=gene438;Dbxref=Genbank:WP_002209212.1;Name=WP_002209212.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002209212.1;transl_table=11
NC_017154.1	RefSeq	gene	449750	450538	.	+	.	ID=gene439;Name=YPD4_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02205;old_locus_tag=YPD4_0373
NC_017154.1	Protein Homology	CDS	449750	450538	.	+	0	ID=cds431;Parent=gene439;Dbxref=Genbank:WP_002228116.1;Name=WP_002228116.1;gbkey=CDS;product=DNAse;protein_id=WP_002228116.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	450730	450901	.	+	.	ID=id29;gbkey=repeat_region
NC_017154.1	RefSeq	gene	451067	452344	.	+	.	ID=gene440;Name=YPD4_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02210;old_locus_tag=YPD4_0374
NC_017154.1	Protein Homology	CDS	451067	452344	.	+	0	ID=cds432;Parent=gene440;Dbxref=Genbank:WP_032465614.1;Name=WP_032465614.1;gbkey=CDS;product=nucleoside transporter NupC;protein_id=WP_032465614.1;transl_table=11
NC_017154.1	RefSeq	gene	452920	453717	.	+	.	ID=gene441;Name=YPD4_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02215;old_locus_tag=YPD4_0375
NC_017154.1	Protein Homology	CDS	452920	453717	.	+	0	ID=cds433;Parent=gene441;Dbxref=Genbank:WP_002216078.1;Name=WP_002216078.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase 2;protein_id=WP_002216078.1;transl_table=11
NC_017154.1	RefSeq	gene	453838	454380	.	+	.	ID=gene442;Name=YPD4_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02220;old_locus_tag=YPD4_0376
NC_017154.1	Protein Homology	CDS	453838	454380	.	+	0	ID=cds434;Parent=gene442;Dbxref=Genbank:WP_002353659.1;Name=WP_002353659.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_002353659.1;transl_table=11
NC_017154.1	RefSeq	gene	454377	455156	.	+	.	ID=gene443;Name=YPD4_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02225;old_locus_tag=YPD4_0377
NC_017154.1	Protein Homology	CDS	454377	455156	.	+	0	ID=cds435;Parent=gene443;Dbxref=Genbank:WP_002231521.1;Name=WP_002231521.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_002231521.1;transl_table=11
NC_017154.1	RefSeq	gene	455288	456511	.	+	.	ID=gene444;Name=YPD4_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02230;old_locus_tag=YPD4_0378
NC_017154.1	Protein Homology	CDS	455288	456511	.	+	0	ID=cds436;Parent=gene444;Dbxref=Genbank:WP_002209216.1;Name=WP_002209216.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_002209216.1;transl_table=11
NC_017154.1	RefSeq	gene	456636	457355	.	+	.	ID=gene445;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=YPD4_RS02235;old_locus_tag=YPD4_0379
NC_017154.1	Protein Homology	CDS	456636	457355	.	+	0	ID=cds437;Parent=gene445;Dbxref=Genbank:WP_002209217.1;Name=WP_002209217.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_002209217.1;transl_table=11
NC_017154.1	RefSeq	gene	457467	458168	.	-	.	ID=gene446;Name=YPD4_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02240;old_locus_tag=YPD4_0380
NC_017154.1	Protein Homology	CDS	457467	458168	.	-	0	ID=cds438;Parent=gene446;Dbxref=Genbank:WP_002209218.1;Name=WP_002209218.1;gbkey=CDS;product=protein Smp;protein_id=WP_002209218.1;transl_table=11
NC_017154.1	RefSeq	gene	458400	459380	.	+	.	ID=gene447;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=YPD4_RS02245;old_locus_tag=YPD4_0381
NC_017154.1	Protein Homology	CDS	458400	459380	.	+	0	ID=cds439;Parent=gene447;Dbxref=Genbank:WP_002209219.1;Name=WP_002209219.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_002209219.1;transl_table=11
NC_017154.1	RefSeq	gene	459468	460850	.	+	.	ID=gene448;Name=YPD4_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02250;old_locus_tag=YPD4_0382
NC_017154.1	Protein Homology	CDS	459468	460850	.	+	0	ID=cds440;Parent=gene448;Dbxref=Genbank:WP_002209220.1;Name=WP_002209220.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11
NC_017154.1	RefSeq	gene	461009	462280	.	+	.	ID=gene449;Name=YPD4_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02255;old_locus_tag=YPD4_0383
NC_017154.1	Protein Homology	CDS	461009	462280	.	+	0	ID=cds441;Parent=gene449;Dbxref=Genbank:WP_002209221.1;Name=WP_002209221.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_002209221.1;transl_table=11
NC_017154.1	RefSeq	gene	462437	463567	.	+	.	ID=gene450;Name=YPD4_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02260;old_locus_tag=YPD4_0384
NC_017154.1	Protein Homology	CDS	462437	463567	.	+	0	ID=cds442;Parent=gene450;Dbxref=Genbank:WP_002218755.1;Name=WP_002218755.1;gbkey=CDS;product=cell division protein Fic;protein_id=WP_002218755.1;transl_table=11
NC_017154.1	RefSeq	gene	463713	465355	.	-	.	ID=gene451;Name=YPD4_RS02265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS02265;pseudo=true
NC_017154.1	Protein Homology	CDS	463713	465355	.	-	0	ID=cds443;Parent=gene451;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	465559	466065	.	-	.	ID=gene452;Name=YPD4_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02270;old_locus_tag=YPD4_0387
NC_017154.1	Protein Homology	CDS	465559	466065	.	-	0	ID=cds444;Parent=gene452;Dbxref=Genbank:WP_002215967.1;Name=WP_002215967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215967.1;transl_table=11
NC_017154.1	RefSeq	gene	466071	467372	.	-	.	ID=gene453;Name=YPD4_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02275;old_locus_tag=YPD4_0388
NC_017154.1	Protein Homology	CDS	466071	467372	.	-	0	ID=cds445;Parent=gene453;Dbxref=Genbank:WP_002209224.1;Name=WP_002209224.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209224.1;transl_table=11
NC_017154.1	RefSeq	gene	467369	467992	.	-	.	ID=gene454;Name=YPD4_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02280;old_locus_tag=YPD4_0389
NC_017154.1	Protein Homology	CDS	467369	467992	.	-	0	ID=cds446;Parent=gene454;Dbxref=Genbank:WP_002209225.1;Name=WP_002209225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209225.1;transl_table=11
NC_017154.1	RefSeq	gene	468367	471093	.	-	.	ID=gene455;Name=YPD4_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02285;old_locus_tag=YPD4_0390
NC_017154.1	Protein Homology	CDS	468367	471093	.	-	0	ID=cds447;Parent=gene455;Dbxref=Genbank:WP_002209226.1;Name=WP_002209226.1;gbkey=CDS;product=carbonate dehydratase;protein_id=WP_002209226.1;transl_table=11
NC_017154.1	RefSeq	gene	471663	473582	.	+	.	ID=gene456;Name=YPD4_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02290;old_locus_tag=YPD4_0391
NC_017154.1	Protein Homology	CDS	471663	473582	.	+	0	ID=cds448;Parent=gene456;Dbxref=Genbank:WP_002209227.1;Name=WP_002209227.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002209227.1;transl_table=11
NC_017154.1	RefSeq	gene	473818	474210	.	+	.	ID=gene457;Name=YPD4_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02295;old_locus_tag=YPD4_0392
NC_017154.1	Protein Homology	CDS	473818	474210	.	+	0	ID=cds449;Parent=gene457;Dbxref=Genbank:WP_002209228.1;Name=WP_002209228.1;gbkey=CDS;product=Trp operon repressor;protein_id=WP_002209228.1;transl_table=11
NC_017154.1	RefSeq	gene	474207	474749	.	-	.	ID=gene458;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=YPD4_RS02300;old_locus_tag=YPD4_0393
NC_017154.1	Protein Homology	CDS	474207	474749	.	-	0	ID=cds450;Parent=gene458;Dbxref=Genbank:WP_002209229.1;Name=WP_002209229.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase;protein_id=WP_002209229.1;transl_table=11
NC_017154.1	RefSeq	gene	474843	475490	.	+	.	ID=gene459;Name=YPD4_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02305;old_locus_tag=YPD4_0394
NC_017154.1	Protein Homology	CDS	474843	475490	.	+	0	ID=cds451;Parent=gene459;Dbxref=Genbank:WP_002209230.1;Name=WP_002209230.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;product=phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11
NC_017154.1	RefSeq	gene	475487	476353	.	-	.	ID=gene460;Name=YPD4_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02310;old_locus_tag=YPD4_0395
NC_017154.1	Protein Homology	CDS	475487	476353	.	-	0	ID=cds452;Parent=gene460;Dbxref=Genbank:WP_002209231.1;Name=WP_002209231.1;Note=AraC family%3B binds to the right arm of the replication origin oriC;gbkey=CDS;product=RobA family efflux pump transcriptional activator;protein_id=WP_002209231.1;transl_table=11
NC_017154.1	RefSeq	gene	476579	477046	.	+	.	ID=gene461;Name=YPD4_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02315;old_locus_tag=YPD4_0396
NC_017154.1	Protein Homology	CDS	476579	477046	.	+	0	ID=cds453;Parent=gene461;Dbxref=Genbank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209232.1;transl_table=11
NC_017154.1	RefSeq	gene	477220	477936	.	-	.	ID=gene462;Name=YPD4_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02320;old_locus_tag=YPD4_0397
NC_017154.1	Protein Homology	CDS	477220	477936	.	-	0	ID=cds454;Parent=gene462;Dbxref=Genbank:WP_002209234.1;Name=WP_002209234.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209234.1;transl_table=11
NC_017154.1	RefSeq	gene	479040	481498	.	+	.	ID=gene463;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=pseudogene;locus_tag=YPD4_RS02325;pseudo=true
NC_017154.1	Protein Homology	CDS	479040	481498	.	+	0	ID=cds455;Parent=gene463;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=thrA;product=aspartate kinase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	481501	482430	.	+	.	ID=gene464;Name=YPD4_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02330;old_locus_tag=YPD4_0400
NC_017154.1	Protein Homology	CDS	481501	482430	.	+	0	ID=cds456;Parent=gene464;Dbxref=Genbank:WP_002209238.1;Name=WP_002209238.1;gbkey=CDS;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11
NC_017154.1	RefSeq	gene	482434	483723	.	+	.	ID=gene465;Name=YPD4_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02335;old_locus_tag=YPD4_0401
NC_017154.1	Protein Homology	CDS	482434	483723	.	+	0	ID=cds457;Parent=gene465;Dbxref=Genbank:WP_002209239.1;Name=WP_002209239.1;gbkey=CDS;product=threonine synthase;protein_id=WP_002209239.1;transl_table=11
NC_017154.1	RefSeq	gene	484540	485316	.	-	.	ID=gene466;Name=YPD4_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02340;old_locus_tag=YPD4_0402
NC_017154.1	Protein Homology	CDS	484540	485316	.	-	0	ID=cds458;Parent=gene466;Dbxref=Genbank:WP_002209240.1;Name=WP_002209240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209240.1;transl_table=11
NC_017154.1	RefSeq	gene	485848	486801	.	+	.	ID=gene467;Name=YPD4_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02345;old_locus_tag=YPD4_0403
NC_017154.1	Protein Homology	CDS	485848	486801	.	+	0	ID=cds459;Parent=gene467;Dbxref=Genbank:WP_002209241.1;Name=WP_002209241.1;gbkey=CDS;product=transaldolase;protein_id=WP_002209241.1;transl_table=11
NC_017154.1	RefSeq	gene	487089	487676	.	+	.	ID=gene468;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=YPD4_RS02350;old_locus_tag=YPD4_0404
NC_017154.1	Protein Homology	CDS	487089	487676	.	+	0	ID=cds460;Parent=gene468;Dbxref=Genbank:WP_002209243.1;Name=WP_002209243.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=WP_002209243.1;transl_table=11
NC_017154.1	RefSeq	gene	487804	489192	.	+	.	ID=gene469;Name=YPD4_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02355;old_locus_tag=YPD4_0405
NC_017154.1	Protein Homology	CDS	487804	489192	.	+	0	ID=cds461;Parent=gene469;Dbxref=Genbank:WP_002209244.1;Name=WP_002209244.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209244.1;transl_table=11
NC_017154.1	RefSeq	gene	489262	491709	.	-	.	ID=gene470;Name=YPD4_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02360;old_locus_tag=YPD4_0406
NC_017154.1	Protein Homology	CDS	489262	491709	.	-	0	ID=cds462;Parent=gene470;Dbxref=Genbank:WP_002209245.1;Name=WP_002209245.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_002209245.1;transl_table=11
NC_017154.1	RefSeq	gene	491998	492609	.	-	.	ID=gene471;Name=YPD4_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02365;old_locus_tag=YPD4_0407
NC_017154.1	Protein Homology	CDS	491998	492609	.	-	0	ID=cds463;Parent=gene471;Dbxref=Genbank:WP_002209246.1;Name=WP_002209246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209246.1;transl_table=11
NC_017154.1	RefSeq	gene	492983	494893	.	+	.	ID=gene472;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=YPD4_RS02370;old_locus_tag=YPD4_0408
NC_017154.1	Protein Homology	CDS	492983	494893	.	+	0	ID=cds464;Parent=gene472;Dbxref=Genbank:WP_002209248.1;Name=WP_002209248.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_002209248.1;transl_table=11
NC_017154.1	RefSeq	gene	495005	496144	.	+	.	ID=gene473;Name=YPD4_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02375;old_locus_tag=YPD4_0409
NC_017154.1	Protein Homology	CDS	495005	496144	.	+	0	ID=cds465;Parent=gene473;Dbxref=Genbank:WP_002209249.1;Name=WP_002209249.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_002209249.1;transl_table=11
NC_017154.1	RefSeq	gene	496387	497572	.	+	.	ID=gene474;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=pseudogene;locus_tag=YPD4_RS02380;old_locus_tag=YPD4_0410;pseudo=true
NC_017154.1	Protein Homology	CDS	496387	497572	.	+	0	ID=cds466;Parent=gene474;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=nhaA;product=sodium:proton antiporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	497702	498601	.	+	.	ID=gene475;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=YPD4_RS02385;old_locus_tag=YPD4_0411
NC_017154.1	Protein Homology	CDS	497702	498601	.	+	0	ID=cds467;Parent=gene475;Dbxref=Genbank:WP_002220713.1;Name=WP_002220713.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional regulator;protein_id=WP_002220713.1;transl_table=11
NC_017154.1	RefSeq	gene	498732	498995	.	-	.	ID=gene476;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=YPD4_RS02390
NC_017154.1	Protein Homology	CDS	498732	498995	.	-	0	ID=cds468;Parent=gene476;Dbxref=Genbank:WP_002220715.1;Name=WP_002220715.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_002220715.1;transl_table=11
NC_017154.1	RefSeq	gene	499017	499193	.	-	.	ID=gene477;Name=YPD4_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02395
NC_017154.1	Protein Homology	CDS	499017	499193	.	-	0	ID=cds469;Parent=gene477;Dbxref=Genbank:WP_002228113.1;Name=WP_002228113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228113.1;transl_table=11
NC_017154.1	RefSeq	gene	499410	500348	.	+	.	ID=gene478;Name=YPD4_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02400;old_locus_tag=YPD4_0412
NC_017154.1	Protein Homology	CDS	499410	500348	.	+	0	ID=cds470;Parent=gene478;Dbxref=Genbank:WP_002210510.1;Name=WP_002210510.1;gbkey=CDS;product=riboflavin biosynthesis protein RibF;protein_id=WP_002210510.1;transl_table=11
NC_017154.1	RefSeq	gene	500380	503196	.	+	.	ID=gene479;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=YPD4_RS02405;old_locus_tag=YPD4_0413
NC_017154.1	Protein Homology	CDS	500380	503196	.	+	0	ID=cds471;Parent=gene479;Dbxref=Genbank:WP_002210509.1;Name=WP_002210509.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_002210509.1;transl_table=11
NC_017154.1	RefSeq	gene	503196	503705	.	+	.	ID=gene480;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=YPD4_RS02410;old_locus_tag=YPD4_0414
NC_017154.1	Protein Homology	CDS	503196	503705	.	+	0	ID=cds472;Parent=gene480;Dbxref=Genbank:WP_002210508.1;Name=WP_002210508.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_002210508.1;transl_table=11
NC_017154.1	RefSeq	gene	503773	504231	.	+	.	ID=gene481;Name=YPD4_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02415;old_locus_tag=YPD4_0415
NC_017154.1	Protein Homology	CDS	503773	504231	.	+	0	ID=cds473;Parent=gene481;Dbxref=Genbank:WP_002228112.1;Name=WP_002228112.1;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228112.1;transl_table=11
NC_017154.1	RefSeq	gene	504212	505165	.	+	.	ID=gene482;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=YPD4_RS02420;old_locus_tag=YPD4_0416
NC_017154.1	Protein Homology	CDS	504212	505165	.	+	0	ID=cds474;Parent=gene482;Dbxref=Genbank:WP_002210506.1;Name=WP_002210506.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_002210506.1;transl_table=11
NC_017154.1	RefSeq	gene	505233	505358	.	+	.	ID=gene483;Name=YPD4_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02425
NC_017154.1	Protein Homology	CDS	505233	505358	.	+	0	ID=cds475;Parent=gene483;Dbxref=Genbank:WP_002210505.1;Name=WP_002210505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210505.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	505241	505378	.	+	.	ID=id30;gbkey=repeat_region
NC_017154.1	RefSeq	gene	505387	505557	.	+	.	ID=gene484;Name=YPD4_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02430
NC_017154.1	Protein Homology	CDS	505387	505557	.	+	0	ID=cds476;Parent=gene484;Dbxref=Genbank:WP_002216778.1;Name=WP_002216778.1;gbkey=CDS;product=invasin;protein_id=WP_002216778.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	505394	506116	.	+	.	ID=id31;gbkey=repeat_region
NC_017154.1	RefSeq	gene	505547	506005	.	+	.	ID=gene485;Name=YPD4_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02435;old_locus_tag=YPD4_0417
NC_017154.1	Protein Homology	CDS	505547	506005	.	+	0	ID=cds477;Parent=gene485;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	506458	507279	.	+	.	ID=gene486;Name=YPD4_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02440;old_locus_tag=YPD4_0418
NC_017154.1	Protein Homology	CDS	506458	507279	.	+	0	ID=cds478;Parent=gene486;Dbxref=Genbank:WP_002210504.1;Name=WP_002210504.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_002210504.1;transl_table=11
NC_017154.1	RefSeq	gene	507752	508927	.	+	.	ID=gene487;Name=YPD4_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02445;old_locus_tag=YPD4_0419
NC_017154.1	Protein Homology	CDS	507752	508927	.	+	0	ID=cds479;Parent=gene487;Dbxref=Genbank:WP_002224759.1;Name=WP_002224759.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl-phosphate synthase small chain;protein_id=WP_002224759.1;transl_table=11
NC_017154.1	RefSeq	gene	508943	512176	.	+	.	ID=gene488;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=YPD4_RS02450;old_locus_tag=YPD4_0420
NC_017154.1	Protein Homology	CDS	508943	512176	.	+	0	ID=cds480;Parent=gene488;Dbxref=Genbank:WP_002210502.1;Name=WP_002210502.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl-phosphate synthase large chain;protein_id=WP_002210502.1;transl_table=11
NC_017154.1	RefSeq	gene	512404	513018	.	-	.	ID=gene489;Name=YPD4_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02455;old_locus_tag=YPD4_0421
NC_017154.1	Protein Homology	CDS	512404	513018	.	-	0	ID=cds481;Parent=gene489;Dbxref=Genbank:WP_002210501.1;Name=WP_002210501.1;gbkey=CDS;product=lysine transporter LysE;protein_id=WP_002210501.1;transl_table=11
NC_017154.1	RefSeq	gene	513342	514142	.	+	.	ID=gene490;Name=YPD4_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02460;old_locus_tag=YPD4_0422
NC_017154.1	Protein Homology	CDS	513342	514142	.	+	0	ID=cds482;Parent=gene490;Dbxref=Genbank:WP_002210499.1;Name=WP_002210499.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210499.1;transl_table=11
NC_017154.1	RefSeq	gene	514139	514594	.	+	.	ID=gene491;Name=YPD4_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02465;old_locus_tag=YPD4_0423
NC_017154.1	Protein Homology	CDS	514139	514594	.	+	0	ID=cds483;Parent=gene491;Dbxref=Genbank:WP_002210498.1;Name=WP_002210498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210498.1;transl_table=11
NC_017154.1	RefSeq	gene	514744	515226	.	+	.	ID=gene492;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=YPD4_RS02470;old_locus_tag=YPD4_0424
NC_017154.1	Protein Homology	CDS	514744	515226	.	+	0	ID=cds484;Parent=gene492;Dbxref=Genbank:WP_002210497.1;Name=WP_002210497.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	515288	516008	.	+	.	ID=id32;gbkey=repeat_region
NC_017154.1	RefSeq	gene	515293	515448	.	+	.	ID=gene493;Name=YPD4_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02475
NC_017154.1	Protein Homology	CDS	515293	515448	.	+	0	ID=cds485;Parent=gene493;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	515438	515896	.	+	.	ID=gene494;Name=YPD4_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02480;old_locus_tag=YPD4_0425
NC_017154.1	Protein Homology	CDS	515438	515896	.	+	0	ID=cds486;Parent=gene494;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	516431	516652	.	+	.	ID=gene495;Name=YPD4_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02485
NC_017154.1	Protein Homology	CDS	516431	516652	.	+	0	ID=cds487;Parent=gene495;Dbxref=Genbank:WP_002210494.1;Name=WP_002210494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210494.1;transl_table=11
NC_017154.1	RefSeq	gene	516779	517243	.	+	.	ID=gene496;Name=YPD4_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02490;old_locus_tag=YPD4_0426
NC_017154.1	Protein Homology	CDS	516779	517243	.	+	0	ID=cds488;Parent=gene496;Dbxref=Genbank:WP_002210493.1;Name=WP_002210493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210493.1;transl_table=11
NC_017154.1	RefSeq	gene	517333	518202	.	-	.	ID=gene497;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=YPD4_RS02495;old_locus_tag=YPD4_0427
NC_017154.1	Protein Homology	CDS	517333	518202	.	-	0	ID=cds489;Parent=gene497;Dbxref=Genbank:WP_002210492.1;Name=WP_002210492.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=bis(5'-nucleosyl)-tetraphosphatase symmetrical;protein_id=WP_002210492.1;transl_table=11
NC_017154.1	RefSeq	gene	518219	518596	.	-	.	ID=gene498;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=YPD4_RS02500;old_locus_tag=YPD4_0428
NC_017154.1	Protein Homology	CDS	518219	518596	.	-	0	ID=cds490;Parent=gene498;Dbxref=Genbank:WP_002210491.1;Name=WP_002210491.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=protein ApaG;protein_id=WP_002210491.1;transl_table=11
NC_017154.1	RefSeq	gene	518610	519428	.	-	.	ID=gene499;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=YPD4_RS02505;old_locus_tag=YPD4_0429
NC_017154.1	Protein Homology	CDS	518610	519428	.	-	0	ID=cds491;Parent=gene499;Dbxref=Genbank:WP_002210490.1;Name=WP_002210490.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=ribosomal RNA small subunit methyltransferase A;protein_id=WP_002210490.1;transl_table=11
NC_017154.1	RefSeq	gene	519421	520416	.	-	.	ID=gene500;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=YPD4_RS02510;old_locus_tag=YPD4_0430
NC_017154.1	Protein Homology	CDS	519421	520416	.	-	0	ID=cds492;Parent=gene500;Dbxref=Genbank:WP_002210489.1;Name=WP_002210489.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_002210489.1;transl_table=11
NC_017154.1	RefSeq	gene	520400	521704	.	-	.	ID=gene501;Name=YPD4_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02515;old_locus_tag=YPD4_0431
NC_017154.1	Protein Homology	CDS	520400	521704	.	-	0	ID=cds493;Parent=gene501;Dbxref=Genbank:WP_002210488.1;Name=WP_002210488.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=chaperone SurA;protein_id=WP_002210488.1;transl_table=11
NC_017154.1	RefSeq	gene	521772	524114	.	-	.	ID=gene502;Name=YPD4_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02520;old_locus_tag=YPD4_0432
NC_017154.1	Protein Homology	CDS	521772	524114	.	-	0	ID=cds494;Parent=gene502;Dbxref=Genbank:WP_002228111.1;Name=WP_002228111.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS-assembly protein LptD;protein_id=WP_002228111.1;transl_table=11
NC_017154.1	RefSeq	gene	524299	525132	.	+	.	ID=gene503;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=YPD4_RS02525;old_locus_tag=YPD4_0433
NC_017154.1	Protein Homology	CDS	524299	525132	.	+	0	ID=cds495;Parent=gene503;Dbxref=Genbank:WP_002210486.1;Name=WP_002210486.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=dnaJ-like protein DjlA;protein_id=WP_002210486.1;transl_table=11
NC_017154.1	RefSeq	gene	525430	526050	.	-	.	ID=gene504;Name=YPD4_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02530;old_locus_tag=YPD4_0434
NC_017154.1	Protein Homology	CDS	525430	526050	.	-	0	ID=cds496;Parent=gene504;Dbxref=Genbank:WP_002210485.1;Name=WP_002210485.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=WP_002210485.1;transl_table=11
NC_017154.1	RefSeq	gene	527273	528016	.	-	.	ID=gene505;Name=YPD4_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02535;old_locus_tag=YPD4_0435
NC_017154.1	Protein Homology	CDS	527273	528016	.	-	0	ID=cds497;Parent=gene505;Dbxref=Genbank:WP_002214747.1;Name=WP_002214747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214747.1;transl_table=11
NC_017154.1	RefSeq	gene	528346	529359	.	+	.	ID=gene506;Name=YPD4_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02540;old_locus_tag=YPD4_0436
NC_017154.1	Protein Homology	CDS	528346	529359	.	+	0	ID=cds498;Parent=gene506;Dbxref=Genbank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210482.1;transl_table=11
NC_017154.1	RefSeq	gene	529370	529930	.	+	.	ID=gene507;Name=YPD4_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02545;old_locus_tag=YPD4_0437
NC_017154.1	Protein Homology	CDS	529370	529930	.	+	0	ID=cds499;Parent=gene507;Dbxref=Genbank:WP_002210481.1;Name=WP_002210481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210481.1;transl_table=11
NC_017154.1	RefSeq	gene	529939	531441	.	+	.	ID=gene508;Name=YPD4_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02550;old_locus_tag=YPD4_0438
NC_017154.1	Protein Homology	CDS	529939	531441	.	+	0	ID=cds500;Parent=gene508;Dbxref=Genbank:WP_002210480.1;Name=WP_002210480.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002210480.1;transl_table=11
NC_017154.1	RefSeq	gene	531604	532122	.	+	.	ID=gene509;Name=YPD4_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02555;old_locus_tag=YPD4_0439
NC_017154.1	Protein Homology	CDS	531604	532122	.	+	0	ID=cds501;Parent=gene509;Dbxref=Genbank:WP_002210479.1;Name=WP_002210479.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210479.1;transl_table=11
NC_017154.1	RefSeq	gene	532196	532639	.	+	.	ID=gene510;Name=YPD4_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02560;old_locus_tag=YPD4_0440
NC_017154.1	Protein Homology	CDS	532196	532639	.	+	0	ID=cds502;Parent=gene510;Dbxref=Genbank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;product=lysozyme;protein_id=WP_002210478.1;transl_table=11
NC_017154.1	RefSeq	gene	532672	534516	.	+	.	ID=gene511;Name=YPD4_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02565;old_locus_tag=YPD4_0441
NC_017154.1	Protein Homology	CDS	532672	534516	.	+	0	ID=cds503;Parent=gene511;Dbxref=Genbank:WP_002210477.1;Name=WP_002210477.1;gbkey=CDS;product=type VI secretion protein TssF;protein_id=WP_002210477.1;transl_table=11
NC_017154.1	RefSeq	gene	534509	535492	.	+	.	ID=gene512;Name=YPD4_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02570;old_locus_tag=YPD4_0442
NC_017154.1	Protein Homology	CDS	534509	535492	.	+	0	ID=cds504;Parent=gene512;Dbxref=Genbank:WP_002210476.1;Name=WP_002210476.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210476.1;transl_table=11
NC_017154.1	RefSeq	gene	535510	538098	.	+	.	ID=gene513;Name=YPD4_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02575;old_locus_tag=YPD4_0443
NC_017154.1	Protein Homology	CDS	535510	538098	.	+	0	ID=cds505;Parent=gene513;Dbxref=Genbank:WP_002210475.1;Name=WP_002210475.1;gbkey=CDS;product=peptidase;protein_id=WP_002210475.1;transl_table=11
NC_017154.1	RefSeq	gene	538202	540550	.	+	.	ID=gene514;Name=YPD4_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02580;old_locus_tag=YPD4_0444
NC_017154.1	Protein Homology	CDS	538202	540550	.	+	0	ID=cds506;Parent=gene514;Dbxref=Genbank:WP_002210474.1;Name=WP_002210474.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210474.1;transl_table=11
NC_017154.1	RefSeq	gene	540563	541135	.	+	.	ID=gene515;Name=YPD4_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02585;old_locus_tag=YPD4_0445
NC_017154.1	Protein Homology	CDS	540563	541135	.	+	0	ID=cds507;Parent=gene515;Dbxref=Genbank:WP_002228110.1;Name=WP_002228110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228110.1;transl_table=11
NC_017154.1	RefSeq	gene	541160	542782	.	+	.	ID=gene516;Name=YPD4_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02590;old_locus_tag=YPD4_0446
NC_017154.1	Protein Homology	CDS	541160	542782	.	+	0	ID=cds508;Parent=gene516;Dbxref=Genbank:WP_002228109.1;Name=WP_002228109.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228109.1;transl_table=11
NC_017154.1	RefSeq	gene	542808	543911	.	+	.	ID=gene517;Name=YPD4_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02595;old_locus_tag=YPD4_0447
NC_017154.1	Protein Homology	CDS	542808	543911	.	+	0	ID=cds509;Parent=gene517;Dbxref=Genbank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214739.1;transl_table=11
NC_017154.1	RefSeq	gene	543904	544521	.	+	.	ID=gene518;Name=YPD4_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02600;old_locus_tag=YPD4_0448
NC_017154.1	Protein Homology	CDS	543904	544521	.	+	0	ID=cds510;Parent=gene518;Dbxref=Genbank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210473.1;transl_table=11
NC_017154.1	RefSeq	gene	544527	544892	.	+	.	ID=gene519;Name=YPD4_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02605;old_locus_tag=YPD4_0449
NC_017154.1	Protein Homology	CDS	544527	544892	.	+	0	ID=cds511;Parent=gene519;Dbxref=Genbank:WP_002214737.1;Name=WP_002214737.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214737.1;transl_table=11
NC_017154.1	RefSeq	gene	544885	545376	.	+	.	ID=gene520;Name=YPD4_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02610;old_locus_tag=YPD4_0450
NC_017154.1	Protein Homology	CDS	544885	545376	.	+	0	ID=cds512;Parent=gene520;Dbxref=Genbank:WP_002210471.1;Name=WP_002210471.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210471.1;transl_table=11
NC_017154.1	RefSeq	gene	545496	546851	.	+	.	ID=gene521;Name=YPD4_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02615;old_locus_tag=YPD4_0451
NC_017154.1	Protein Homology	CDS	545496	546851	.	+	0	ID=cds513;Parent=gene521;Dbxref=Genbank:WP_002210470.1;Name=WP_002210470.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210470.1;transl_table=11
NC_017154.1	RefSeq	gene	546848	548458	.	+	.	ID=gene522;Name=YPD4_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02620;old_locus_tag=YPD4_0452
NC_017154.1	Protein Homology	CDS	546848	548458	.	+	0	ID=cds514;Parent=gene522;Dbxref=Genbank:WP_002210469.1;Name=WP_002210469.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210469.1;transl_table=11
NC_017154.1	RefSeq	gene	548520	551960	.	+	.	ID=gene523;Name=YPD4_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02625;old_locus_tag=YPD4_0453
NC_017154.1	Protein Homology	CDS	548520	551960	.	+	0	ID=cds515;Parent=gene523;Dbxref=Genbank:WP_002214734.1;Name=WP_002214734.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214734.1;transl_table=11
NC_017154.1	RefSeq	gene	551982	552335	.	+	.	ID=gene524;Name=YPD4_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02630;old_locus_tag=YPD4_0454
NC_017154.1	Protein Homology	CDS	551982	552335	.	+	0	ID=cds516;Parent=gene524;Dbxref=Genbank:WP_002210468.1;Name=WP_002210468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210468.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	552378	552548	.	+	.	ID=id33;gbkey=repeat_region
NC_017154.1	RefSeq	gene	552591	555497	.	-	.	ID=gene525;Name=YPD4_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02635;old_locus_tag=YPD4_0455
NC_017154.1	Protein Homology	CDS	552591	555497	.	-	0	ID=cds517;Parent=gene525;Dbxref=Genbank:WP_002220588.1;Name=WP_002220588.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=RNA polymerase-associated protein RapA;protein_id=WP_002220588.1;transl_table=11
NC_017154.1	RefSeq	gene	555958	558327	.	-	.	ID=gene526;Name=YPD4_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02640;old_locus_tag=YPD4_0456
NC_017154.1	Protein Homology	CDS	555958	558327	.	-	0	ID=cds518;Parent=gene526;Dbxref=Genbank:WP_002210466.1;Name=WP_002210466.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;product=DNA polymerase II;protein_id=WP_002210466.1;transl_table=11
NC_017154.1	RefSeq	gene	558523	559290	.	+	.	ID=gene527;Name=YPD4_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02645;old_locus_tag=YPD4_0457
NC_017154.1	Protein Homology	CDS	558523	559290	.	+	0	ID=cds519;Parent=gene527;Dbxref=Genbank:WP_002210465.1;Name=WP_002210465.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210465.1;transl_table=11
NC_017154.1	RefSeq	gene	559359	560069	.	-	.	ID=gene528;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=YPD4_RS02650;old_locus_tag=YPD4_0458
NC_017154.1	Protein Homology	CDS	559359	560069	.	-	0	ID=cds520;Parent=gene528;Dbxref=Genbank:WP_002210464.1;Name=WP_002210464.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine import ATP-binding protein ThiQ;protein_id=WP_002210464.1;transl_table=11
NC_017154.1	RefSeq	gene	560056	561663	.	-	.	ID=gene529;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=YPD4_RS02655;old_locus_tag=YPD4_0459
NC_017154.1	Protein Homology	CDS	560056	561663	.	-	0	ID=cds521;Parent=gene529;Dbxref=Genbank:WP_015683849.1;Name=WP_015683849.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine transporter membrane protein;protein_id=WP_015683849.1;transl_table=11
NC_017154.1	RefSeq	gene	561639	562685	.	-	.	ID=gene530;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=YPD4_RS02660;old_locus_tag=YPD4_0460
NC_017154.1	Protein Homology	CDS	561639	562685	.	-	0	ID=cds522;Parent=gene530;Dbxref=Genbank:WP_002210462.1;Name=WP_002210462.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;product=thiamine ABC transporter substrate-binding protein;protein_id=WP_002210462.1;transl_table=11
NC_017154.1	RefSeq	gene	563186	563470	.	+	.	ID=gene531;Name=YPD4_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02665
NC_017154.1	Protein Homology	CDS	563186	563470	.	+	0	ID=cds523;Parent=gene531;Dbxref=Genbank:WP_002214269.1;Name=WP_002214269.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214269.1;transl_table=11
NC_017154.1	RefSeq	gene	563571	565232	.	-	.	ID=gene532;Name=YPD4_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02670;old_locus_tag=YPD4_0461
NC_017154.1	Protein Homology	CDS	563571	565232	.	-	0	ID=cds524;Parent=gene532;Dbxref=Genbank:WP_002210461.1;Name=WP_002210461.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210461.1;transl_table=11
NC_017154.1	RefSeq	gene	565470	565643	.	+	.	ID=gene533;Name=YPD4_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02675
NC_017154.1	Protein Homology	CDS	565470	565643	.	+	0	ID=cds525;Parent=gene533;Dbxref=Genbank:WP_002214268.1;Name=WP_002214268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214268.1;transl_table=11
NC_017154.1	RefSeq	gene	565896	566828	.	+	.	ID=gene534;Name=YPD4_RS02680;end_range=566828,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS02680;old_locus_tag=YPD4_0462;partial=true;pseudo=true
NC_017154.1	Protein Homology	CDS	565896	566828	.	+	0	ID=cds526;Parent=gene534;end_range=566828,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=sugar transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	566828	568786	.	+	.	ID=id34;gbkey=repeat_region
NC_017154.1	RefSeq	gene	566896	567675	.	-	.	ID=gene535;Name=YPD4_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02685;old_locus_tag=YPD4_0463
NC_017154.1	Protein Homology	CDS	566896	567675	.	-	0	ID=cds527;Parent=gene535;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	567675	568697	.	-	.	ID=gene536;Name=YPD4_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02690;old_locus_tag=YPD4_0464
NC_017154.1	Protein Homology	CDS	567675	568697	.	-	0	ID=cds528;Parent=gene536;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	568785	569036	.	+	.	ID=gene537;Name=YPD4_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02695
NC_017154.1	Protein Homology	CDS	568785	569036	.	+	0	ID=cds529;Parent=gene537;Dbxref=Genbank:WP_002397472.1;Name=WP_002397472.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002397472.1;transl_table=11
NC_017154.1	RefSeq	gene	569277	569879	.	-	.	ID=gene538;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=YPD4_RS02700;old_locus_tag=YPD4_0465
NC_017154.1	Protein Homology	CDS	569277	569879	.	-	0	ID=cds530;Parent=gene538;Dbxref=Genbank:WP_002210456.1;Name=WP_002210456.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002210456.1;transl_table=11
NC_017154.1	RefSeq	gene	569894	571324	.	-	.	ID=gene539;Name=YPD4_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02705;old_locus_tag=YPD4_0466
NC_017154.1	Protein Homology	CDS	569894	571324	.	-	0	ID=cds531;Parent=gene539;Dbxref=Genbank:WP_002210455.1;Name=WP_002210455.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002210455.1;transl_table=11
NC_017154.1	RefSeq	gene	571326	572417	.	-	.	ID=gene540;Name=YPD4_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02710;old_locus_tag=YPD4_0467
NC_017154.1	Protein Homology	CDS	571326	572417	.	-	0	ID=cds532;Parent=gene540;Dbxref=Genbank:WP_002210454.1;Name=WP_002210454.1;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=WP_002210454.1;transl_table=11
NC_017154.1	RefSeq	gene	572420	573982	.	-	.	ID=gene541;Name=YPD4_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02715;old_locus_tag=YPD4_0468
NC_017154.1	Protein Homology	CDS	572420	573982	.	-	0	ID=cds533;Parent=gene541;Dbxref=Genbank:WP_002210453.1;Name=WP_002210453.1;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	574016	574740	.	+	.	ID=id35;gbkey=repeat_region
NC_017154.1	RefSeq	gene	574129	574374	.	-	.	ID=gene542;Name=YPD4_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02720
NC_017154.1	Protein Homology	CDS	574129	574374	.	-	0	ID=cds534;Parent=gene542;Dbxref=Genbank:WP_002230125.1;Name=WP_002230125.1;gbkey=CDS;product=transposase;protein_id=WP_002230125.1;transl_table=11
NC_017154.1	RefSeq	gene	574371	574637	.	-	.	ID=gene543;Name=YPD4_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02725
NC_017154.1	Protein Homology	CDS	574371	574637	.	-	0	ID=cds535;Parent=gene543;Dbxref=Genbank:WP_044023327.1;Name=WP_044023327.1;gbkey=CDS;product=transposase;protein_id=WP_044023327.1;transl_table=11
NC_017154.1	RefSeq	gene	574576	574746	.	-	.	ID=gene544;Name=YPD4_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02730
NC_017154.1	Protein Homology	CDS	574576	574746	.	-	0	ID=cds536;Parent=gene544;Dbxref=Genbank:WP_002216432.1;Name=WP_002216432.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216432.1;transl_table=11
NC_017154.1	RefSeq	gene	575908	576864	.	+	.	ID=gene545;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=YPD4_RS02735;old_locus_tag=YPD4_0469
NC_017154.1	Protein Homology	CDS	575908	576864	.	+	0	ID=cds537;Parent=gene545;Dbxref=Genbank:WP_002216434.1;Name=WP_002216434.1;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;gbkey=CDS;gene=leuO;product=leucine transcriptional activator;protein_id=WP_002216434.1;transl_table=11
NC_017154.1	RefSeq	gene	577198	577404	.	+	.	ID=gene546;Name=YPD4_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02740
NC_017154.1	Protein Homology	CDS	577198	577404	.	+	0	ID=cds538;Parent=gene546;Dbxref=Genbank:WP_002216435.1;Name=WP_002216435.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216435.1;transl_table=11
NC_017154.1	RefSeq	gene	577401	579206	.	+	.	ID=gene547;Name=YPD4_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02745;old_locus_tag=YPD4_0470
NC_017154.1	Protein Homology	CDS	577401	579206	.	+	0	ID=cds539;Parent=gene547;Dbxref=Genbank:WP_002216437.1;Name=WP_002216437.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002216437.1;transl_table=11
NC_017154.1	RefSeq	gene	579237	579347	.	+	.	ID=gene548;Name=YPD4_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02750
NC_017154.1	Protein Homology	CDS	579237	579347	.	+	0	ID=cds540;Parent=gene548;Dbxref=Genbank:WP_002228104.1;Name=WP_002228104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228104.1;transl_table=11
NC_017154.1	RefSeq	gene	579666	581393	.	+	.	ID=gene549;Name=YPD4_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02755;old_locus_tag=YPD4_0471
NC_017154.1	Protein Homology	CDS	579666	581393	.	+	0	ID=cds541;Parent=gene549;Dbxref=Genbank:WP_002228103.1;Name=WP_002228103.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002228103.1;transl_table=11
NC_017154.1	RefSeq	gene	581396	581890	.	+	.	ID=gene550;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=YPD4_RS02760;old_locus_tag=YPD4_0472
NC_017154.1	Protein Homology	CDS	581396	581890	.	+	0	ID=cds542;Parent=gene550;Dbxref=Genbank:WP_002210448.1;Name=WP_002210448.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase;protein_id=WP_002210448.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	581938	582658	.	+	.	ID=id36;gbkey=repeat_region
NC_017154.1	RefSeq	gene	582089	582547	.	+	.	ID=gene551;Name=YPD4_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02765;old_locus_tag=YPD4_0473
NC_017154.1	Protein Homology	CDS	582089	582547	.	+	0	ID=cds543;Parent=gene551;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	582869	582985	.	-	.	ID=gene552;Name=YPD4_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02770
NC_017154.1	Protein Homology	CDS	582869	582985	.	-	0	ID=cds544;Parent=gene552;Dbxref=Genbank:WP_002217242.1;Name=WP_002217242.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217242.1;transl_table=11
NC_017154.1	RefSeq	gene	583052	584062	.	+	.	ID=gene553;Name=YPD4_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02775;old_locus_tag=YPD4_0474
NC_017154.1	Protein Homology	CDS	583052	584062	.	+	0	ID=cds545;Parent=gene553;Dbxref=Genbank:WP_002210447.1;Name=WP_002210447.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210447.1;transl_table=11
NC_017154.1	RefSeq	gene	584193	584633	.	-	.	ID=gene554;Name=YPD4_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02780;old_locus_tag=YPD4_0475
NC_017154.1	Protein Homology	CDS	584193	584633	.	-	0	ID=cds546;Parent=gene554;Dbxref=Genbank:WP_002210446.1;Name=WP_002210446.1;gbkey=CDS;product=alanine transporter;protein_id=WP_002210446.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	584994	585166	.	+	.	ID=id37;gbkey=repeat_region
NC_017154.1	RefSeq	gene	585745	586203	.	+	.	ID=gene555;Name=YPD4_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02785;old_locus_tag=YPD4_0476
NC_017154.1	Protein Homology	CDS	585745	586203	.	+	0	ID=cds547;Parent=gene555;Dbxref=Genbank:WP_002210443.1;Name=WP_002210443.1;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_002210443.1;transl_table=11
NC_017154.1	RefSeq	gene	586206	587168	.	+	.	ID=gene556;Name=YPD4_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02790;old_locus_tag=YPD4_0477
NC_017154.1	Protein Homology	CDS	586206	587168	.	+	0	ID=cds548;Parent=gene556;Dbxref=Genbank:WP_002210442.1;Name=WP_002210442.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase H;protein_id=WP_002210442.1;transl_table=11
NC_017154.1	RefSeq	gene	587165	587482	.	+	.	ID=gene557;Name=YPD4_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02795;old_locus_tag=YPD4_0478
NC_017154.1	Protein Homology	CDS	587165	587482	.	+	0	ID=cds549;Parent=gene557;Dbxref=Genbank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11
NC_017154.1	RefSeq	gene	587548	589311	.	+	.	ID=gene558;Name=YPD4_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02800;old_locus_tag=YPD4_0479
NC_017154.1	Protein Homology	CDS	587548	589311	.	+	0	ID=cds550;Parent=gene558;Dbxref=Genbank:WP_002210440.1;Name=WP_002210440.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=penicillin-binding protein 3;protein_id=WP_002210440.1;transl_table=11
NC_017154.1	RefSeq	gene	589298	590785	.	+	.	ID=gene559;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=YPD4_RS02805;old_locus_tag=YPD4_0480
NC_017154.1	Protein Homology	CDS	589298	590785	.	+	0	ID=cds551;Parent=gene559;Dbxref=Genbank:WP_002210439.1;Name=WP_002210439.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=WP_002210439.1;transl_table=11
NC_017154.1	RefSeq	gene	590782	592158	.	+	.	ID=gene560;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=YPD4_RS02810;old_locus_tag=YPD4_0481
NC_017154.1	Protein Homology	CDS	590782	592158	.	+	0	ID=cds552;Parent=gene560;Dbxref=Genbank:WP_002210438.1;Name=WP_002210438.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_002210438.1;transl_table=11
NC_017154.1	RefSeq	gene	592152	593234	.	+	.	ID=gene561;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=YPD4_RS02815;old_locus_tag=YPD4_0482
NC_017154.1	Protein Homology	CDS	592152	593234	.	+	0	ID=cds553;Parent=gene561;Dbxref=Genbank:WP_002210437.1;Name=WP_002210437.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_002210437.1;transl_table=11
NC_017154.1	RefSeq	gene	593237	594553	.	+	.	ID=gene562;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=YPD4_RS02820;old_locus_tag=YPD4_0483
NC_017154.1	Protein Homology	CDS	593237	594553	.	+	0	ID=cds554;Parent=gene562;Dbxref=Genbank:WP_002210436.1;Name=WP_002210436.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_002210436.1;transl_table=11
NC_017154.1	RefSeq	gene	594553	595755	.	+	.	ID=gene563;Name=YPD4_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02825;old_locus_tag=YPD4_0484
NC_017154.1	Protein Homology	CDS	594553	595755	.	+	0	ID=cds555;Parent=gene563;Dbxref=Genbank:WP_002210435.1;Name=WP_002210435.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11
NC_017154.1	RefSeq	gene	595752	596822	.	+	.	ID=gene564;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=YPD4_RS02830;old_locus_tag=YPD4_0485
NC_017154.1	Protein Homology	CDS	595752	596822	.	+	0	ID=cds556;Parent=gene564;Dbxref=Genbank:WP_002210434.1;Name=WP_002210434.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_002210434.1;transl_table=11
NC_017154.1	RefSeq	gene	596960	598435	.	+	.	ID=gene565;Name=YPD4_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02835;old_locus_tag=YPD4_0486
NC_017154.1	Protein Homology	CDS	596960	598435	.	+	0	ID=cds557;Parent=gene565;Dbxref=Genbank:WP_002216457.1;Name=WP_002216457.1;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_002216457.1;transl_table=11
NC_017154.1	RefSeq	gene	598428	599348	.	+	.	ID=gene566;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=YPD4_RS02840;old_locus_tag=YPD4_0487
NC_017154.1	Protein Homology	CDS	598428	599348	.	+	0	ID=cds558;Parent=gene566;Dbxref=Genbank:WP_002210432.1;Name=WP_002210432.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11
NC_017154.1	RefSeq	gene	599350	600177	.	+	.	ID=gene567;Name=YPD4_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02845;old_locus_tag=YPD4_0488
NC_017154.1	Protein Homology	CDS	599350	600177	.	+	0	ID=cds559;Parent=gene567;Dbxref=Genbank:WP_002228100.1;Name=WP_002228100.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_002228100.1;transl_table=11
NC_017154.1	RefSeq	gene	600204	601460	.	+	.	ID=gene568;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=YPD4_RS02850;old_locus_tag=YPD4_0489
NC_017154.1	Protein Homology	CDS	600204	601460	.	+	0	ID=cds560;Parent=gene568;Dbxref=Genbank:WP_002210431.1;Name=WP_002210431.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11
NC_017154.1	RefSeq	gene	601533	602684	.	+	.	ID=gene569;Name=YPD4_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02855;old_locus_tag=YPD4_0490
NC_017154.1	Protein Homology	CDS	601533	602684	.	+	0	ID=cds561;Parent=gene569;Dbxref=Genbank:WP_002210430.1;Name=WP_002210430.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_002210430.1;transl_table=11
NC_017154.1	RefSeq	gene	602784	603704	.	+	.	ID=gene570;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=YPD4_RS02860;old_locus_tag=YPD4_0491
NC_017154.1	Protein Homology	CDS	602784	603704	.	+	0	ID=cds562;Parent=gene570;Dbxref=Genbank:WP_002228285.1;Name=WP_002228285.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11
NC_017154.1	RefSeq	gene	603871	604395	.	-	.	ID=gene571;Name=YPD4_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02865;old_locus_tag=YPD4_0492
NC_017154.1	Protein Homology	CDS	603871	604395	.	-	0	ID=cds563;Parent=gene571;Dbxref=Genbank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210428.1;transl_table=11
NC_017154.1	RefSeq	gene	604424	604957	.	+	.	ID=gene572;Name=YPD4_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02870;old_locus_tag=YPD4_0493
NC_017154.1	Protein Homology	CDS	604424	604957	.	+	0	ID=cds564;Parent=gene572;Dbxref=Genbank:WP_002210427.1;Name=WP_002210427.1;gbkey=CDS;product=secretion monitor;protein_id=WP_002210427.1;transl_table=11
NC_017154.1	RefSeq	gene	605035	607749	.	+	.	ID=gene573;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=YPD4_RS02875;old_locus_tag=YPD4_0494
NC_017154.1	Protein Homology	CDS	605035	607749	.	+	0	ID=cds565;Parent=gene573;Dbxref=Genbank:WP_002210426.1;Name=WP_002210426.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=protein translocase subunit SecA;protein_id=WP_002210426.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	607792	607967	.	+	.	ID=id38;gbkey=repeat_region
NC_017154.1	RefSeq	gene	608044	608430	.	+	.	ID=gene574;Name=YPD4_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02880;old_locus_tag=YPD4_0495
NC_017154.1	Protein Homology	CDS	608044	608430	.	+	0	ID=cds566;Parent=gene574;Dbxref=Genbank:WP_002210424.1;Name=WP_002210424.1;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002210424.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	608495	610581	.	+	.	ID=id39;gbkey=repeat_region
NC_017154.1	RefSeq	gene	608692	609471	.	-	.	ID=gene575;Name=YPD4_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02885;old_locus_tag=YPD4_0496
NC_017154.1	Protein Homology	CDS	608692	609471	.	-	0	ID=cds567;Parent=gene575;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	609471	610493	.	-	.	ID=gene576;Name=YPD4_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02890;old_locus_tag=YPD4_0497
NC_017154.1	Protein Homology	CDS	609471	610493	.	-	0	ID=cds568;Parent=gene576;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	610507	610686	.	-	.	ID=gene577;Name=YPD4_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02895
NC_017154.1	Protein Homology	CDS	610507	610686	.	-	0	ID=cds569;Parent=gene577;Dbxref=Genbank:WP_002210422.1;Name=WP_002210422.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002210422.1;transl_table=11
NC_017154.1	RefSeq	gene	610771	611166	.	-	.	ID=gene578;Name=YPD4_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02900;old_locus_tag=YPD4_0498
NC_017154.1	Protein Homology	CDS	610771	611166	.	-	0	ID=cds570;Parent=gene578;Dbxref=Genbank:WP_002210421.1;Name=WP_002210421.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210421.1;transl_table=11
NC_017154.1	RefSeq	gene	611470	611754	.	-	.	ID=gene579;Name=YPD4_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02905
NC_017154.1	Protein Homology	CDS	611470	611754	.	-	0	ID=cds571;Parent=gene579;Dbxref=Genbank:WP_002210420.1;Name=WP_002210420.1;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002210420.1;transl_table=11
NC_017154.1	RefSeq	gene	611751	612146	.	-	.	ID=gene580;Name=YPD4_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02910;old_locus_tag=YPD4_0499
NC_017154.1	Protein Homology	CDS	611751	612146	.	-	0	ID=cds572;Parent=gene580;Dbxref=Genbank:WP_002210419.1;Name=WP_002210419.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210419.1;transl_table=11
NC_017154.1	RefSeq	gene	612149	612454	.	-	.	ID=gene581;Name=YPD4_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02915;old_locus_tag=YPD4_0500
NC_017154.1	Protein Homology	CDS	612149	612454	.	-	0	ID=cds573;Parent=gene581;Dbxref=Genbank:WP_002210418.1;Name=WP_002210418.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210418.1;transl_table=11
NC_017154.1	RefSeq	gene	612459	612605	.	-	.	ID=gene582;Name=YPD4_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02920
NC_017154.1	Protein Homology	CDS	612459	612605	.	-	0	ID=cds574;Parent=gene582;Dbxref=Genbank:WP_002210417.1;Name=WP_002210417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210417.1;transl_table=11
NC_017154.1	RefSeq	gene	612609	612989	.	-	.	ID=gene583;Name=YPD4_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02925;old_locus_tag=YPD4_0501
NC_017154.1	Protein Homology	CDS	612609	612989	.	-	0	ID=cds575;Parent=gene583;Dbxref=Genbank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210416.1;transl_table=11
NC_017154.1	RefSeq	gene	613216	613605	.	-	.	ID=gene584;Name=YPD4_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02930;old_locus_tag=YPD4_0502
NC_017154.1	Protein Homology	CDS	613216	613605	.	-	0	ID=cds576;Parent=gene584;Dbxref=Genbank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;product=modulator protein MzrA;protein_id=WP_002210415.1;transl_table=11
NC_017154.1	RefSeq	gene	613602	614300	.	-	.	ID=gene585;Name=YPD4_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02935;old_locus_tag=YPD4_0503
NC_017154.1	Protein Homology	CDS	613602	614300	.	-	0	ID=cds577;Parent=gene585;Dbxref=Genbank:WP_002210414.1;Name=WP_002210414.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210414.1;transl_table=11
NC_017154.1	RefSeq	gene	614578	615111	.	-	.	ID=gene586;Name=YPD4_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02940;old_locus_tag=YPD4_0504
NC_017154.1	Protein Homology	CDS	614578	615111	.	-	0	ID=cds578;Parent=gene586;Dbxref=Genbank:WP_002218957.1;Name=WP_002218957.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218957.1;transl_table=11
NC_017154.1	RefSeq	gene	615360	616154	.	-	.	ID=gene587;Name=YPD4_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02945;old_locus_tag=YPD4_0505
NC_017154.1	Protein Homology	CDS	615360	616154	.	-	0	ID=cds579;Parent=gene587;Dbxref=Genbank:WP_002210412.1;Name=WP_002210412.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210412.1;transl_table=11
NC_017154.1	RefSeq	gene	616417	617718	.	-	.	ID=gene588;Name=YPD4_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02950;old_locus_tag=YPD4_0506
NC_017154.1	Protein Homology	CDS	616417	617718	.	-	0	ID=cds580;Parent=gene588;Dbxref=Genbank:WP_002353699.1;Name=WP_002353699.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_002353699.1;transl_table=11
NC_017154.1	RefSeq	gene	617768	617935	.	+	.	ID=gene589;Name=YPD4_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02955
NC_017154.1	Protein Homology	CDS	617768	617935	.	+	0	ID=cds581;Parent=gene589;Dbxref=Genbank:WP_002362425.1;Name=WP_002362425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002362425.1;transl_table=11
NC_017154.1	RefSeq	gene	618466	619875	.	+	.	ID=gene590;Name=YPD4_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02960;old_locus_tag=YPD4_0507
NC_017154.1	Protein Homology	CDS	618466	619875	.	+	0	ID=cds582;Parent=gene590;Dbxref=Genbank:WP_002210410.1;Name=WP_002210410.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=uronate isomerase;protein_id=WP_002210410.1;transl_table=11
NC_017154.1	RefSeq	gene	620074	621525	.	+	.	ID=gene591;Name=YPD4_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02965;old_locus_tag=YPD4_0508
NC_017154.1	Protein Homology	CDS	620074	621525	.	+	0	ID=cds583;Parent=gene591;Dbxref=Genbank:WP_002210409.1;Name=WP_002210409.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_002210409.1;transl_table=11
NC_017154.1	RefSeq	gene	621536	623025	.	+	.	ID=gene592;Name=YPD4_RS02970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS02970;old_locus_tag=YPD4_0509;pseudo=true
NC_017154.1	Protein Homology	CDS	621536	623025	.	+	0	ID=cds584;Parent=gene592;exception=annotated by transcript or proteomic data;gbkey=CDS;product=altronate hydrolase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	623178	623708	.	+	.	ID=gene593;Name=YPD4_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02975;old_locus_tag=YPD4_0510
NC_017154.1	Protein Homology	CDS	623178	623708	.	+	0	ID=cds585;Parent=gene593;Dbxref=Genbank:WP_002210407.1;Name=WP_002210407.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210407.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	623715	624438	.	+	.	ID=id40;gbkey=repeat_region
NC_017154.1	RefSeq	gene	623826	624284	.	-	.	ID=gene594;Name=YPD4_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02980;old_locus_tag=YPD4_0511
NC_017154.1	Protein Homology	CDS	623826	624284	.	-	0	ID=cds586;Parent=gene594;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	624485	625742	.	-	.	ID=gene595;Name=YPD4_RS02985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS02985;old_locus_tag=YPD4_0512;pseudo=true
NC_017154.1	Protein Homology	CDS	624485	625742	.	-	0	ID=cds587;Parent=gene595;exception=annotated by transcript or proteomic data;gbkey=CDS;product=serine/threonine protein kinase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	626277	627272	.	-	.	ID=gene596;Name=YPD4_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02990;old_locus_tag=YPD4_0513
NC_017154.1	Protein Homology	CDS	626277	627272	.	-	0	ID=cds588;Parent=gene596;Dbxref=Genbank:WP_002210405.1;Name=WP_002210405.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210405.1;transl_table=11
NC_017154.1	RefSeq	gene	627475	627984	.	-	.	ID=gene597;Name=YPD4_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS02995;old_locus_tag=YPD4_0514
NC_017154.1	Protein Homology	CDS	627475	627984	.	-	0	ID=cds589;Parent=gene597;Dbxref=Genbank:WP_002210404.1;Name=WP_002210404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210404.1;transl_table=11
NC_017154.1	RefSeq	gene	628223	631036	.	-	.	ID=gene598;Name=YPD4_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03000;old_locus_tag=YPD4_0515
NC_017154.1	Protein Homology	CDS	628223	631036	.	-	0	ID=cds590;Parent=gene598;Dbxref=Genbank:WP_002353701.1;Name=WP_002353701.1;gbkey=CDS;product=autotransporter;protein_id=WP_002353701.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	629355	629695	.	+	.	ID=id41;gbkey=repeat_region
NC_017154.1	RefSeq	gene	631676	632863	.	+	.	ID=gene599;Name=YPD4_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03005;old_locus_tag=YPD4_0516
NC_017154.1	Protein Homology	CDS	631676	632863	.	+	0	ID=cds591;Parent=gene599;Dbxref=Genbank:WP_002210402.1;Name=WP_002210402.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase G;protein_id=WP_002210402.1;transl_table=11
NC_017154.1	RefSeq	gene	632979	635000	.	-	.	ID=gene600;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=YPD4_RS03010;old_locus_tag=YPD4_0517
NC_017154.1	Protein Homology	CDS	632979	635000	.	-	0	ID=cds592;Parent=gene600;Dbxref=Genbank:WP_002210401.1;Name=WP_002210401.1;Note=catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=WP_002210401.1;transl_table=11
NC_017154.1	RefSeq	gene	635213	635782	.	-	.	ID=gene601;Name=YPD4_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03015;old_locus_tag=YPD4_0518
NC_017154.1	Protein Homology	CDS	635213	635782	.	-	0	ID=cds593;Parent=gene601;Dbxref=Genbank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210400.1;transl_table=11
NC_017154.1	RefSeq	gene	635878	636111	.	+	.	ID=gene602;Name=YPD4_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03020
NC_017154.1	Protein Homology	CDS	635878	636111	.	+	0	ID=cds594;Parent=gene602;Dbxref=Genbank:WP_002214938.1;Name=WP_002214938.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214938.1;transl_table=11
NC_017154.1	RefSeq	gene	636173	637672	.	-	.	ID=gene603;Name=YPD4_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03025;old_locus_tag=YPD4_0519
NC_017154.1	Protein Homology	CDS	636173	637672	.	-	0	ID=cds595;Parent=gene603;Dbxref=Genbank:WP_015683852.1;Name=WP_015683852.1;gbkey=CDS;product=kinase;protein_id=WP_015683852.1;transl_table=11
NC_017154.1	RefSeq	gene	637704	639437	.	-	.	ID=gene604;Name=YPD4_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03030;old_locus_tag=YPD4_0520
NC_017154.1	Protein Homology	CDS	637704	639437	.	-	0	ID=cds596;Parent=gene604;Dbxref=Genbank:WP_002210398.1;Name=WP_002210398.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210398.1;transl_table=11
NC_017154.1	RefSeq	gene	639493	640476	.	-	.	ID=gene605;Name=YPD4_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03035;old_locus_tag=YPD4_0521
NC_017154.1	Protein Homology	CDS	639493	640476	.	-	0	ID=cds597;Parent=gene605;Dbxref=Genbank:WP_002228095.1;Name=WP_002228095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228095.1;transl_table=11
NC_017154.1	RefSeq	gene	640578	641216	.	-	.	ID=gene606;Name=YPD4_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03040;old_locus_tag=YPD4_0522
NC_017154.1	Protein Homology	CDS	640578	641216	.	-	0	ID=cds598;Parent=gene606;Dbxref=Genbank:WP_002228094.1;Name=WP_002228094.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002228094.1;transl_table=11
NC_017154.1	RefSeq	gene	641218	641859	.	-	.	ID=gene607;Name=YPD4_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03045;old_locus_tag=YPD4_0523
NC_017154.1	Protein Homology	CDS	641218	641859	.	-	0	ID=cds599;Parent=gene607;Dbxref=Genbank:WP_002210396.1;Name=WP_002210396.1;gbkey=CDS;product=tellurium resistance protein TerX;protein_id=WP_002210396.1;transl_table=11
NC_017154.1	RefSeq	gene	641892	642530	.	-	.	ID=gene608;Name=YPD4_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03050;old_locus_tag=YPD4_0524
NC_017154.1	Protein Homology	CDS	641892	642530	.	-	0	ID=cds600;Parent=gene608;Dbxref=Genbank:WP_002210395.1;Name=WP_002210395.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002210395.1;transl_table=11
NC_017154.1	RefSeq	gene	643245	644933	.	+	.	ID=gene609;Name=YPD4_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03055;old_locus_tag=YPD4_0525
NC_017154.1	Protein Homology	CDS	643245	644933	.	+	0	ID=cds601;Parent=gene609;Dbxref=Genbank:WP_002210394.1;Name=WP_002210394.1;gbkey=CDS;product=outer membrane transporter CdiB;protein_id=WP_002210394.1;transl_table=11
NC_017154.1	RefSeq	gene	644978	654866	.	+	.	ID=gene610;Name=YPD4_RS03060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03060;old_locus_tag=YPD4_0526;pseudo=true
NC_017154.1	Protein Homology	CDS	644978	654866	.	+	0	ID=cds602;Parent=gene610;exception=annotated by transcript or proteomic data;gbkey=CDS;product=adhesin;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	650080	650827	.	+	.	ID=id42;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	651455	651598	.	+	.	ID=id43;gbkey=repeat_region
NC_017154.1	RefSeq	gene	654863	655096	.	+	.	ID=gene611;Name=YPD4_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03065
NC_017154.1	Protein Homology	CDS	654863	655096	.	+	0	ID=cds603;Parent=gene611;Dbxref=Genbank:WP_002214946.1;Name=WP_002214946.1;gbkey=CDS;product=immunity protein CdiI;protein_id=WP_002214946.1;transl_table=11
NC_017154.1	RefSeq	gene	655158	655307	.	+	.	ID=gene612;Name=YPD4_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03070
NC_017154.1	Protein Homology	CDS	655158	655307	.	+	0	ID=cds604;Parent=gene612;Dbxref=Genbank:WP_002214947.1;Name=WP_002214947.1;gbkey=CDS;product=adhesin;protein_id=WP_002214947.1;transl_table=11
NC_017154.1	RefSeq	gene	655362	655589	.	+	.	ID=gene613;Name=YPD4_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03075
NC_017154.1	Protein Homology	CDS	655362	655589	.	+	0	ID=cds605;Parent=gene613;Dbxref=Genbank:WP_002214949.1;Name=WP_002214949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214949.1;transl_table=11
NC_017154.1	RefSeq	gene	655670	656101	.	+	.	ID=gene614;Name=YPD4_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03080
NC_017154.1	Protein Homology	CDS	655670	656101	.	+	0	ID=cds606;Parent=gene614;Dbxref=Genbank:WP_002228093.1;Name=WP_002228093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228093.1;transl_table=11
NC_017154.1	RefSeq	gene	656134	656889	.	+	.	ID=gene615;Name=YPD4_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03085;old_locus_tag=YPD4_0527
NC_017154.1	Protein Homology	CDS	656134	656889	.	+	0	ID=cds607;Parent=gene615;Dbxref=Genbank:WP_002214952.1;Name=WP_002214952.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002214952.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	656139	656886	.	+	.	ID=id44;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	656923	657066	.	+	.	ID=id45;gbkey=repeat_region
NC_017154.1	RefSeq	gene	656953	657117	.	+	.	ID=gene616;Name=YPD4_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03090
NC_017154.1	Protein Homology	CDS	656953	657117	.	+	0	ID=cds608;Parent=gene616;Dbxref=Genbank:WP_002228290.1;Name=WP_002228290.1;gbkey=CDS;product=adhesin;protein_id=WP_002228290.1;transl_table=11
NC_017154.1	RefSeq	gene	657385	659670	.	-	.	ID=gene617;Name=YPD4_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03095;old_locus_tag=YPD4_0528
NC_017154.1	Protein Homology	CDS	657385	659670	.	-	0	ID=cds609;Parent=gene617;Dbxref=Genbank:WP_002210389.1;Name=WP_002210389.1;gbkey=CDS;product=autotransporter;protein_id=WP_002210389.1;transl_table=11
NC_017154.1	RefSeq	gene	659730	660725	.	-	.	ID=gene618;Name=YPD4_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03100;old_locus_tag=YPD4_0529
NC_017154.1	Protein Homology	CDS	659730	660725	.	-	0	ID=cds610;Parent=gene618;Dbxref=Genbank:WP_002210388.1;Name=WP_002210388.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210388.1;transl_table=11
NC_017154.1	RefSeq	gene	660827	662131	.	-	.	ID=gene619;Name=YPD4_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03105;old_locus_tag=YPD4_0530
NC_017154.1	Protein Homology	CDS	660827	662131	.	-	0	ID=cds611;Parent=gene619;Dbxref=Genbank:WP_015683854.1;Name=WP_015683854.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683854.1;transl_table=11
NC_017154.1	RefSeq	gene	662533	663648	.	+	.	ID=gene620;Name=YPD4_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03110;old_locus_tag=YPD4_0531
NC_017154.1	Protein Homology	CDS	662533	663648	.	+	0	ID=cds612;Parent=gene620;Dbxref=Genbank:WP_002353714.1;Name=WP_002353714.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002353714.1;transl_table=11
NC_017154.1	RefSeq	gene	663731	667084	.	+	.	ID=gene621;Name=YPD4_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03115;old_locus_tag=YPD4_0532
NC_017154.1	Protein Homology	CDS	663731	667084	.	+	0	ID=cds613;Parent=gene621;Dbxref=Genbank:WP_002214212.1;Name=WP_002214212.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214212.1;transl_table=11
NC_017154.1	RefSeq	gene	667193	668179	.	+	.	ID=gene622;Name=YPD4_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03120;old_locus_tag=YPD4_0533
NC_017154.1	Protein Homology	CDS	667193	668179	.	+	0	ID=cds614;Parent=gene622;Dbxref=Genbank:WP_002210384.1;Name=WP_002210384.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210384.1;transl_table=11
NC_017154.1	RefSeq	gene	668256	669500	.	+	.	ID=gene623;Name=YPD4_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03125;old_locus_tag=YPD4_0534
NC_017154.1	Protein Homology	CDS	668256	669500	.	+	0	ID=cds615;Parent=gene623;Dbxref=Genbank:WP_002214214.1;Name=WP_002214214.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002214214.1;transl_table=11
NC_017154.1	RefSeq	gene	669554	670435	.	+	.	ID=gene624;Name=YPD4_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03130;old_locus_tag=YPD4_0535
NC_017154.1	Protein Homology	CDS	669554	670435	.	+	0	ID=cds616;Parent=gene624;Dbxref=Genbank:WP_002210382.1;Name=WP_002210382.1;gbkey=CDS;product=permease;protein_id=WP_002210382.1;transl_table=11
NC_017154.1	RefSeq	gene	670435	671253	.	+	.	ID=gene625;Name=YPD4_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03135;old_locus_tag=YPD4_0536
NC_017154.1	Protein Homology	CDS	670435	671253	.	+	0	ID=cds617;Parent=gene625;Dbxref=Genbank:WP_002210381.1;Name=WP_002210381.1;gbkey=CDS;product=permease;protein_id=WP_002210381.1;transl_table=11
NC_017154.1	RefSeq	gene	671250	671765	.	+	.	ID=gene626;Name=YPD4_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03140;old_locus_tag=YPD4_0537
NC_017154.1	Protein Homology	CDS	671250	671765	.	+	0	ID=cds618;Parent=gene626;Dbxref=Genbank:WP_002210380.1;Name=WP_002210380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210380.1;transl_table=11
NC_017154.1	RefSeq	gene	671816	673999	.	+	.	ID=gene627;Name=YPD4_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03145;old_locus_tag=YPD4_0538
NC_017154.1	Protein Homology	CDS	671816	673999	.	+	0	ID=cds619;Parent=gene627;Dbxref=Genbank:WP_002210379.1;Name=WP_002210379.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210379.1;transl_table=11
NC_017154.1	RefSeq	gene	674063	675589	.	-	.	ID=gene628;Name=YPD4_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03150;old_locus_tag=YPD4_0539
NC_017154.1	Protein Homology	CDS	674063	675589	.	-	0	ID=cds620;Parent=gene628;Dbxref=Genbank:WP_002214220.1;Name=WP_002214220.1;gbkey=CDS;product=transporter;protein_id=WP_002214220.1;transl_table=11
NC_017154.1	RefSeq	gene	675594	677495	.	-	.	ID=gene629;Name=YPD4_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03155;old_locus_tag=YPD4_0540
NC_017154.1	Protein Homology	CDS	675594	677495	.	-	0	ID=cds621;Parent=gene629;Dbxref=Genbank:WP_002210377.1;Name=WP_002210377.1;gbkey=CDS;product=fusaric acid resistance protein;protein_id=WP_002210377.1;transl_table=11
NC_017154.1	RefSeq	gene	677479	678528	.	-	.	ID=gene630;Name=YPD4_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03160;old_locus_tag=YPD4_0541
NC_017154.1	Protein Homology	CDS	677479	678528	.	-	0	ID=cds622;Parent=gene630;Dbxref=Genbank:WP_002210376.1;Name=WP_002210376.1;gbkey=CDS;product=multidrug resistance protein MdtN;protein_id=WP_002210376.1;transl_table=11
NC_017154.1	RefSeq	gene	678538	678873	.	-	.	ID=gene631;Name=YPD4_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03165
NC_017154.1	Protein Homology	CDS	678538	678873	.	-	0	ID=cds623;Parent=gene631;Dbxref=Genbank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214224.1;transl_table=11
NC_017154.1	RefSeq	gene	678870	679070	.	-	.	ID=gene632;Name=YPD4_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03170
NC_017154.1	Protein Homology	CDS	678870	679070	.	-	0	ID=cds624;Parent=gene632;Dbxref=Genbank:WP_002210374.1;Name=WP_002210374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210374.1;transl_table=11
NC_017154.1	RefSeq	gene	679243	679350	.	-	.	ID=gene633;Name=YPD4_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03175
NC_017154.1	Protein Homology	CDS	679243	679350	.	-	0	ID=cds625;Parent=gene633;Dbxref=Genbank:WP_002214227.1;Name=WP_002214227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214227.1;transl_table=11
NC_017154.1	RefSeq	gene	679836	681068	.	+	.	ID=gene634;Name=YPD4_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03180;old_locus_tag=YPD4_0542
NC_017154.1	Protein Homology	CDS	679836	681068	.	+	0	ID=cds626;Parent=gene634;Dbxref=Genbank:WP_002210373.1;Name=WP_002210373.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002210373.1;transl_table=11
NC_017154.1	RefSeq	gene	681061	682512	.	+	.	ID=gene635;Name=YPD4_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03185;old_locus_tag=YPD4_0543
NC_017154.1	Protein Homology	CDS	681061	682512	.	+	0	ID=cds627;Parent=gene635;Dbxref=Genbank:WP_002214229.1;Name=WP_002214229.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002214229.1;transl_table=11
NC_017154.1	RefSeq	gene	682525	682962	.	+	.	ID=gene636;Name=YPD4_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03190;old_locus_tag=YPD4_0544
NC_017154.1	Protein Homology	CDS	682525	682962	.	+	0	ID=cds628;Parent=gene636;Dbxref=Genbank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;product=polyketide cyclase;protein_id=WP_002210371.1;transl_table=11
NC_017154.1	RefSeq	gene	683096	683722	.	+	.	ID=gene637;Name=YPD4_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03195;old_locus_tag=YPD4_0545
NC_017154.1	Protein Homology	CDS	683096	683722	.	+	0	ID=cds629;Parent=gene637;Dbxref=Genbank:WP_002214230.1;Name=WP_002214230.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002214230.1;transl_table=11
NC_017154.1	RefSeq	gene	683738	684118	.	+	.	ID=gene638;Name=YPD4_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03200;old_locus_tag=YPD4_0546
NC_017154.1	Protein Homology	CDS	683738	684118	.	+	0	ID=cds630;Parent=gene638;Dbxref=Genbank:WP_002210370.1;Name=WP_002210370.1;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210370.1;transl_table=11
NC_017154.1	RefSeq	gene	684403	684807	.	+	.	ID=gene639;Name=YPD4_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03205;old_locus_tag=YPD4_0547
NC_017154.1	Protein Homology	CDS	684403	684807	.	+	0	ID=cds631;Parent=gene639;Dbxref=Genbank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;product=enamine deaminase RidA;protein_id=WP_002210369.1;transl_table=11
NC_017154.1	RefSeq	gene	685022	685324	.	-	.	ID=gene640;Name=YPD4_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03210;old_locus_tag=YPD4_0548
NC_017154.1	Protein Homology	CDS	685022	685324	.	-	0	ID=cds632;Parent=gene640;Dbxref=Genbank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11
NC_017154.1	RefSeq	gene	685584	686300	.	-	.	ID=gene641;Name=YPD4_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03215;old_locus_tag=YPD4_0549
NC_017154.1	Protein Homology	CDS	685584	686300	.	-	0	ID=cds633;Parent=gene641;Dbxref=Genbank:WP_002210367.1;Name=WP_002210367.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002210367.1;transl_table=11
NC_017154.1	RefSeq	gene	686462	687394	.	+	.	ID=gene642;Name=YPD4_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03220;old_locus_tag=YPD4_0550
NC_017154.1	Protein Homology	CDS	686462	687394	.	+	0	ID=cds634;Parent=gene642;Dbxref=Genbank:WP_002210366.1;Name=WP_002210366.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210366.1;transl_table=11
NC_017154.1	RefSeq	gene	687845	688048	.	+	.	ID=gene643;Name=YPD4_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03225
NC_017154.1	Protein Homology	CDS	687845	688048	.	+	0	ID=cds635;Parent=gene643;Dbxref=Genbank:WP_002210365.1;Name=WP_002210365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210365.1;transl_table=11
NC_017154.1	RefSeq	gene	688144	688356	.	+	.	ID=gene644;Name=YPD4_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03230
NC_017154.1	Protein Homology	CDS	688144	688356	.	+	0	ID=cds636;Parent=gene644;Dbxref=Genbank:WP_002218980.1;Name=WP_002218980.1;gbkey=CDS;product=cell filamentation protein Fic;protein_id=WP_002218980.1;transl_table=11
NC_017154.1	RefSeq	gene	688353	688511	.	-	.	ID=gene645;Name=YPD4_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03235
NC_017154.1	Protein Homology	CDS	688353	688511	.	-	0	ID=cds637;Parent=gene645;Dbxref=Genbank:WP_002210363.1;Name=WP_002210363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210363.1;transl_table=11
NC_017154.1	RefSeq	gene	688709	688909	.	-	.	ID=gene646;Name=YPD4_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03240
NC_017154.1	Protein Homology	CDS	688709	688909	.	-	0	ID=cds638;Parent=gene646;Dbxref=Genbank:WP_002214239.1;Name=WP_002214239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214239.1;transl_table=11
NC_017154.1	RefSeq	gene	689067	689297	.	+	.	ID=gene647;Name=YPD4_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03245
NC_017154.1	Protein Homology	CDS	689067	689297	.	+	0	ID=cds639;Parent=gene647;Dbxref=Genbank:WP_002214241.1;Name=WP_002214241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214241.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	689311	689863	.	+	.	ID=id46;gbkey=repeat_region
NC_017154.1	RefSeq	gene	689430	690812	.	+	.	ID=gene648;Name=YPD4_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03250;old_locus_tag=YPD4_0551
NC_017154.1	Protein Homology	CDS	689430	690812	.	+	0	ID=cds640;Parent=gene648;Dbxref=Genbank:WP_002210362.1;Name=WP_002210362.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002210362.1;transl_table=11
NC_017154.1	RefSeq	gene	690821	691291	.	+	.	ID=gene649;Name=YPD4_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03255;old_locus_tag=YPD4_0552
NC_017154.1	Protein Homology	CDS	690821	691291	.	+	0	ID=cds641;Parent=gene649;Dbxref=Genbank:WP_002210361.1;Name=WP_002210361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210361.1;transl_table=11
NC_017154.1	RefSeq	gene	691318	691773	.	+	.	ID=gene650;Name=YPD4_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03260;old_locus_tag=YPD4_0553
NC_017154.1	Protein Homology	CDS	691318	691773	.	+	0	ID=cds642;Parent=gene650;Dbxref=Genbank:WP_002210360.1;Name=WP_002210360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210360.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	691778	691998	.	+	.	ID=id47;gbkey=repeat_region
NC_017154.1	RefSeq	gene	691790	692080	.	+	.	ID=gene651;Name=YPD4_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03265
NC_017154.1	Protein Homology	CDS	691790	692080	.	+	0	ID=cds643;Parent=gene651;Dbxref=Genbank:WP_002217366.1;Name=WP_002217366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217366.1;transl_table=11
NC_017154.1	RefSeq	gene	692058	692396	.	+	.	ID=gene652;Name=YPD4_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03270;old_locus_tag=YPD4_0554
NC_017154.1	Protein Homology	CDS	692058	692396	.	+	0	ID=cds644;Parent=gene652;Dbxref=Genbank:WP_002217368.1;Name=WP_002217368.1;gbkey=CDS;product=terminase;protein_id=WP_002217368.1;transl_table=11
NC_017154.1	RefSeq	gene	692642	692718	.	-	.	ID=gene653;Name=YPD4_RS03275;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS03275;old_locus_tag=YPD4_t6
NC_017154.1	tRNAscan-SE	tRNA	692642	692718	.	-	.	ID=rna8;Parent=gene653;anticodon=(pos:complement(692682..692684));gbkey=tRNA;product=tRNA-Met
NC_017154.1	tRNAscan-SE	exon	692642	692718	.	-	.	ID=id48;Parent=rna8;anticodon=(pos:complement(692682..692684));gbkey=tRNA;product=tRNA-Met
NC_017154.1	RefSeq	gene	692914	694752	.	-	.	ID=gene654;Name=YPD4_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03280;old_locus_tag=YPD4_0555
NC_017154.1	Protein Homology	CDS	692914	694752	.	-	0	ID=cds645;Parent=gene654;Dbxref=Genbank:WP_002210359.1;Name=WP_002210359.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_002210359.1;transl_table=11
NC_017154.1	RefSeq	gene	694910	696659	.	-	.	ID=gene655;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=pseudogene;locus_tag=YPD4_RS03285;pseudo=true
NC_017154.1	Protein Homology	CDS	694910	696659	.	-	0	ID=cds646;Parent=gene655;Note=synthesizes RNA primers at the replication forks;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=dnaG;product=DNA primase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	696795	697010	.	-	.	ID=gene656;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=YPD4_RS03290
NC_017154.1	Protein Homology	CDS	696795	697010	.	-	0	ID=cds647;Parent=gene656;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11
NC_017154.1	RefSeq	gene	697416	698429	.	+	.	ID=gene657;Name=YPD4_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03295;old_locus_tag=YPD4_0558
NC_017154.1	Protein Homology	CDS	697416	698429	.	+	0	ID=cds648;Parent=gene657;Dbxref=Genbank:WP_002212201.1;Name=WP_002212201.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA N6-adenosine threonylcarbamoyltransferase;protein_id=WP_002212201.1;transl_table=11
NC_017154.1	RefSeq	gene	698675	699325	.	-	.	ID=gene658;Name=YPD4_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03300;old_locus_tag=YPD4_0559
NC_017154.1	Protein Homology	CDS	698675	699325	.	-	0	ID=cds649;Parent=gene658;Dbxref=Genbank:WP_002217581.1;Name=WP_002217581.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002217581.1;transl_table=11
NC_017154.1	RefSeq	gene	699433	699792	.	+	.	ID=gene659;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=YPD4_RS03305;old_locus_tag=YPD4_0560
NC_017154.1	Protein Homology	CDS	699433	699792	.	+	0	ID=cds650;Parent=gene659;Dbxref=Genbank:WP_002212199.1;Name=WP_002212199.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_002212199.1;transl_table=11
NC_017154.1	RefSeq	gene	700066	700884	.	+	.	ID=gene660;Name=YPD4_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03310;old_locus_tag=YPD4_0561
NC_017154.1	Protein Homology	CDS	700066	700884	.	+	0	ID=cds651;Parent=gene660;Dbxref=Genbank:WP_002212198.1;Name=WP_002212198.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=undecaprenyl-diphosphatase;protein_id=WP_002212198.1;transl_table=11
NC_017154.1	RefSeq	gene	701120	702359	.	-	.	ID=gene661;Name=YPD4_RS03315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03315;pseudo=true
NC_017154.1	Protein Homology	CDS	701120	702359	.	-	0	ID=cds652;Parent=gene661;exception=annotated by transcript or proteomic data;gbkey=CDS;product=tRNA nucleotidyl transferase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	702519	703142	.	-	.	ID=gene662;Name=YPD4_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03320;old_locus_tag=YPD4_0564
NC_017154.1	Protein Homology	CDS	702519	703142	.	-	0	ID=cds653;Parent=gene662;Dbxref=Genbank:WP_002212196.1;Name=WP_002212196.1;gbkey=CDS;product=signal transduction protein;protein_id=WP_002212196.1;transl_table=11
NC_017154.1	RefSeq	gene	703446	704753	.	+	.	ID=gene663;Name=YPD4_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03325;old_locus_tag=YPD4_0565
NC_017154.1	Protein Homology	CDS	703446	704753	.	+	0	ID=cds654;Parent=gene663;Dbxref=Genbank:WP_002212195.1;Name=WP_002212195.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212195.1;transl_table=11
NC_017154.1	RefSeq	gene	704924	707779	.	+	.	ID=gene664;Name=YPD4_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03330;old_locus_tag=YPD4_0566
NC_017154.1	Protein Homology	CDS	704924	707779	.	+	0	ID=cds655;Parent=gene664;Dbxref=Genbank:WP_002212194.1;Name=WP_002212194.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=glutamate--ammonia-ligase adenylyltransferase;protein_id=WP_002212194.1;transl_table=11
NC_017154.1	RefSeq	gene	707914	709344	.	+	.	ID=gene665;Name=YPD4_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03335;old_locus_tag=YPD4_0567
NC_017154.1	Protein Homology	CDS	707914	709344	.	+	0	ID=cds656;Parent=gene665;Dbxref=Genbank:WP_002212193.1;Name=WP_002212193.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=bifunctional protein HldE;protein_id=WP_002212193.1;transl_table=11
NC_017154.1	RefSeq	gene	709381	710632	.	+	.	ID=gene666;Name=YPD4_RS03340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03340;old_locus_tag=YPD4_0568;pseudo=true
NC_017154.1	Protein Homology	CDS	709381	710632	.	+	0	ID=cds657;Parent=gene666;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	710669	710843	.	+	.	ID=id49;gbkey=repeat_region
NC_017154.1	RefSeq	gene	710957	711238	.	-	.	ID=gene667;Name=YPD4_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03345
NC_017154.1	Protein Homology	CDS	710957	711238	.	-	0	ID=cds658;Parent=gene667;Dbxref=Genbank:WP_002212191.1;Name=WP_002212191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212191.1;transl_table=11
NC_017154.1	RefSeq	gene	711274	711618	.	-	.	ID=gene668;Name=YPD4_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03350
NC_017154.1	Protein Homology	CDS	711274	711618	.	-	0	ID=cds659;Parent=gene668;Dbxref=Genbank:WP_014465988.1;Name=WP_014465988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_014465988.1;transl_table=11
NC_017154.1	RefSeq	gene	711807	712460	.	+	.	ID=gene669;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=YPD4_RS03355;old_locus_tag=YPD4_0569
NC_017154.1	Protein Homology	CDS	711807	712460	.	+	0	ID=cds660;Parent=gene669;Dbxref=Genbank:WP_002212190.1;Name=WP_002212190.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11
NC_017154.1	RefSeq	gene	712919	713701	.	+	.	ID=gene670;Name=YPD4_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03360;old_locus_tag=YPD4_0570
NC_017154.1	Protein Homology	CDS	712919	713701	.	+	0	ID=cds661;Parent=gene670;Dbxref=Genbank:WP_002212189.1;Name=WP_002212189.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;product=LigB family dioxygenase;protein_id=WP_002212189.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	713702	714072	.	+	.	ID=id50;gbkey=repeat_region
NC_017154.1	RefSeq	gene	714108	715269	.	-	.	ID=gene671;Name=YPD4_RS03365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03365;pseudo=true
NC_017154.1	Protein Homology	CDS	714108	715269	.	-	0	ID=cds662;Parent=gene671;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	715279	715962	.	-	.	ID=gene672;Name=YPD4_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03370;old_locus_tag=YPD4_0573
NC_017154.1	Protein Homology	CDS	715279	715962	.	-	0	ID=cds663;Parent=gene672;Dbxref=Genbank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;product=membrane protein;protein_id=WP_002357252.1;transl_table=11
NC_017154.1	RefSeq	gene	716031	716201	.	+	.	ID=gene673;Name=YPD4_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03375
NC_017154.1	Protein Homology	CDS	716031	716201	.	+	0	ID=cds664;Parent=gene673;Dbxref=Genbank:WP_002223694.1;Name=WP_002223694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223694.1;transl_table=11
NC_017154.1	RefSeq	gene	716266	717663	.	-	.	ID=gene674;Name=YPD4_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03380;old_locus_tag=YPD4_0574
NC_017154.1	Protein Homology	CDS	716266	717663	.	-	0	ID=cds665;Parent=gene674;Dbxref=Genbank:WP_002212186.1;Name=WP_002212186.1;gbkey=CDS;product=outer membrane channel protein;protein_id=WP_002212186.1;transl_table=11
NC_017154.1	RefSeq	gene	718059	718691	.	+	.	ID=gene675;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=YPD4_RS03385;old_locus_tag=YPD4_0575
NC_017154.1	Protein Homology	CDS	718059	718691	.	+	0	ID=cds666;Parent=gene675;Dbxref=Genbank:WP_002212184.1;Name=WP_002212184.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_002212184.1;transl_table=11
NC_017154.1	RefSeq	gene	718725	719150	.	+	.	ID=gene676;Name=YPD4_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03390;old_locus_tag=YPD4_0576
NC_017154.1	Protein Homology	CDS	718725	719150	.	+	0	ID=cds667;Parent=gene676;Dbxref=Genbank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002212183.1;transl_table=11
NC_017154.1	RefSeq	gene	719232	720059	.	+	.	ID=gene677;Name=YPD4_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03395;old_locus_tag=YPD4_0577
NC_017154.1	Protein Homology	CDS	719232	720059	.	+	0	ID=cds668;Parent=gene677;Dbxref=Genbank:WP_002217438.1;Name=WP_002217438.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002217438.1;transl_table=11
NC_017154.1	RefSeq	gene	720059	720640	.	+	.	ID=gene678;Name=YPD4_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03400;old_locus_tag=YPD4_0578
NC_017154.1	Protein Homology	CDS	720059	720640	.	+	0	ID=cds669;Parent=gene678;Dbxref=Genbank:WP_002212182.1;Name=WP_002212182.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_002212182.1;transl_table=11
NC_017154.1	RefSeq	gene	720742	722637	.	+	.	ID=gene679;Name=YPD4_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03405;old_locus_tag=YPD4_0579
NC_017154.1	Protein Homology	CDS	720742	722637	.	+	0	ID=cds670;Parent=gene679;Dbxref=Genbank:WP_002212181.1;Name=WP_002212181.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=WP_002212181.1;transl_table=11
NC_017154.1	RefSeq	gene	722641	723552	.	+	.	ID=gene680;Name=YPD4_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03410;old_locus_tag=YPD4_0580
NC_017154.1	Protein Homology	CDS	722641	723552	.	+	0	ID=cds671;Parent=gene680;Dbxref=Genbank:WP_002212180.1;Name=WP_002212180.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212180.1;transl_table=11
NC_017154.1	RefSeq	gene	723610	724194	.	-	.	ID=gene681;Name=YPD4_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03415;old_locus_tag=YPD4_0581
NC_017154.1	Protein Homology	CDS	723610	724194	.	-	0	ID=cds672;Parent=gene681;Dbxref=Genbank:WP_002212179.1;Name=WP_002212179.1;Note=involved in drug resistance;gbkey=CDS;product=NADPH quinone reductase MdaB;protein_id=WP_002212179.1;transl_table=11
NC_017154.1	RefSeq	gene	724498	726771	.	+	.	ID=gene682;Name=YPD4_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03420;old_locus_tag=YPD4_0582
NC_017154.1	Protein Homology	CDS	724498	726771	.	+	0	ID=cds673;Parent=gene682;Dbxref=Genbank:WP_002212178.1;Name=WP_002212178.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=WP_002212178.1;transl_table=11
NC_017154.1	RefSeq	gene	727060	727791	.	+	.	ID=gene683;Name=YPD4_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03425;old_locus_tag=YPD4_0583
NC_017154.1	Protein Homology	CDS	727060	727791	.	+	0	ID=cds674;Parent=gene683;Dbxref=Genbank:WP_002212177.1;Name=WP_002212177.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002212177.1;transl_table=11
NC_017154.1	RefSeq	gene	727970	729394	.	+	.	ID=gene684;Name=YPD4_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03430;old_locus_tag=YPD4_0584
NC_017154.1	Protein Homology	CDS	727970	729394	.	+	0	ID=cds675;Parent=gene684;Dbxref=Genbank:WP_002212176.1;Name=WP_002212176.1;Note=septal ring component that protects the divisome from stress;gbkey=CDS;product=cell division protein FtsP;protein_id=WP_002212176.1;transl_table=11
NC_017154.1	RefSeq	gene	729702	732046	.	+	.	ID=gene685;Name=YPD4_RS03435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03435;pseudo=true
NC_017154.1	Protein Homology	CDS	729702	732046	.	+	0	ID=cds676;Parent=gene685;exception=annotated by transcript or proteomic data;gbkey=CDS;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	732068	732901	.	-	.	ID=gene686;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=YPD4_RS03440;old_locus_tag=YPD4_0587
NC_017154.1	Protein Homology	CDS	732068	732901	.	-	0	ID=cds677;Parent=gene686;Dbxref=Genbank:WP_002212175.1;Name=WP_002212175.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase A;protein_id=WP_002212175.1;transl_table=11
NC_017154.1	RefSeq	gene	733048	733257	.	+	.	ID=gene687;Name=YPD4_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03445
NC_017154.1	Protein Homology	CDS	733048	733257	.	+	0	ID=cds678;Parent=gene687;Dbxref=Genbank:WP_002216186.1;Name=WP_002216186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216186.1;transl_table=11
NC_017154.1	RefSeq	gene	733320	734477	.	-	.	ID=gene688;Name=YPD4_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03450;old_locus_tag=YPD4_0588
NC_017154.1	Protein Homology	CDS	733320	734477	.	-	0	ID=cds679;Parent=gene688;Dbxref=Genbank:WP_002212174.1;Name=WP_002212174.1;gbkey=CDS;product=aldehyde oxidoreductase;protein_id=WP_002212174.1;transl_table=11
NC_017154.1	RefSeq	gene	734875	735768	.	+	.	ID=gene689;Name=YPD4_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03455;old_locus_tag=YPD4_0589
NC_017154.1	Protein Homology	CDS	734875	735768	.	+	0	ID=cds680;Parent=gene689;Dbxref=Genbank:WP_002213786.1;Name=WP_002213786.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002213786.1;transl_table=11
NC_017154.1	RefSeq	gene	735860	736522	.	-	.	ID=gene690;Name=YPD4_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03460;old_locus_tag=YPD4_0590
NC_017154.1	Protein Homology	CDS	735860	736522	.	-	0	ID=cds681;Parent=gene690;Dbxref=Genbank:WP_002212173.1;Name=WP_002212173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212173.1;transl_table=11
NC_017154.1	RefSeq	gene	736715	737926	.	-	.	ID=gene691;Name=YPD4_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03465;old_locus_tag=YPD4_0591
NC_017154.1	Protein Homology	CDS	736715	737926	.	-	0	ID=cds682;Parent=gene691;Dbxref=Genbank:WP_002212172.1;Name=WP_002212172.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11
NC_017154.1	RefSeq	gene	738729	739442	.	+	.	ID=gene692;Name=YPD4_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03470
NC_017154.1	Protein Homology	CDS	738729	739442	.	+	0	ID=cds683;Parent=gene692;Dbxref=Genbank:WP_002353766.1;Name=WP_002353766.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_002353766.1;transl_table=11
NC_017154.1	RefSeq	gene	739446	739877	.	+	.	ID=gene693;Name=YPD4_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03475;old_locus_tag=YPD4_0593
NC_017154.1	Protein Homology	CDS	739446	739877	.	+	0	ID=cds684;Parent=gene693;Dbxref=Genbank:WP_002212170.1;Name=WP_002212170.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_002212170.1;transl_table=11
NC_017154.1	RefSeq	gene	739974	741530	.	-	.	ID=gene694;Name=YPD4_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03480;old_locus_tag=YPD4_0594
NC_017154.1	Protein Homology	CDS	739974	741530	.	-	0	ID=cds685;Parent=gene694;Dbxref=Genbank:WP_002212169.1;Name=WP_002212169.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212169.1;transl_table=11
NC_017154.1	RefSeq	gene	741555	742127	.	-	.	ID=gene695;Name=YPD4_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03485;old_locus_tag=YPD4_0595
NC_017154.1	Protein Homology	CDS	741555	742127	.	-	0	ID=cds686;Parent=gene695;Dbxref=Genbank:WP_002212168.1;Name=WP_002212168.1;gbkey=CDS;product=pseudopilin;protein_id=WP_002212168.1;transl_table=11
NC_017154.1	RefSeq	gene	742111	742584	.	-	.	ID=gene696;Name=YPD4_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03490;old_locus_tag=YPD4_0596
NC_017154.1	Protein Homology	CDS	742111	742584	.	-	0	ID=cds687;Parent=gene696;Dbxref=Genbank:WP_002357277.1;Name=WP_002357277.1;gbkey=CDS;product=pilus biosynthesis protein TadE;protein_id=WP_002357277.1;transl_table=11
NC_017154.1	RefSeq	gene	742581	743351	.	-	.	ID=gene697;Name=YPD4_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03495;old_locus_tag=YPD4_0597
NC_017154.1	Protein Homology	CDS	742581	743351	.	-	0	ID=cds688;Parent=gene697;Dbxref=Genbank:WP_002212166.1;Name=WP_002212166.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212166.1;transl_table=11
NC_017154.1	RefSeq	gene	743335	744169	.	-	.	ID=gene698;Name=YPD4_RS03500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03500;pseudo=true
NC_017154.1	Protein Homology	CDS	743335	744169	.	-	0	ID=cds689;Parent=gene698;exception=annotated by transcript or proteomic data;gbkey=CDS;product=tight adherance operon protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	744166	745041	.	-	.	ID=gene699;Name=YPD4_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03505;old_locus_tag=YPD4_0599
NC_017154.1	Protein Homology	CDS	744166	745041	.	-	0	ID=cds690;Parent=gene699;Dbxref=Genbank:WP_002212164.1;Name=WP_002212164.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212164.1;transl_table=11
NC_017154.1	RefSeq	gene	745038	746324	.	-	.	ID=gene700;Name=YPD4_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03510;old_locus_tag=YPD4_0600
NC_017154.1	Protein Homology	CDS	745038	746324	.	-	0	ID=cds691;Parent=gene700;Dbxref=Genbank:WP_002213785.1;Name=WP_002213785.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002213785.1;transl_table=11
NC_017154.1	RefSeq	gene	746336	747463	.	-	.	ID=gene701;Name=YPD4_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03515;old_locus_tag=YPD4_0601
NC_017154.1	Protein Homology	CDS	746336	747463	.	-	0	ID=cds692;Parent=gene701;Dbxref=Genbank:WP_002213784.1;Name=WP_002213784.1;gbkey=CDS;product=pilus assembly protein CpaE;protein_id=WP_002213784.1;transl_table=11
NC_017154.1	RefSeq	gene	747474	747764	.	-	.	ID=gene702;Name=YPD4_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03520
NC_017154.1	Protein Homology	CDS	747474	747764	.	-	0	ID=cds693;Parent=gene702;Dbxref=Genbank:WP_002213782.1;Name=WP_002213782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213782.1;transl_table=11
NC_017154.1	RefSeq	gene	747761	748210	.	-	.	ID=gene703;Name=YPD4_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03525;old_locus_tag=YPD4_0602
NC_017154.1	Protein Homology	CDS	747761	748210	.	-	0	ID=cds694;Parent=gene703;Dbxref=Genbank:WP_002228297.1;Name=WP_002228297.1;gbkey=CDS;product=secretion protein;protein_id=WP_002228297.1;transl_table=11
NC_017154.1	RefSeq	gene	748225	749079	.	-	.	ID=gene704;Name=YPD4_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03530;old_locus_tag=YPD4_0603
NC_017154.1	Protein Homology	CDS	748225	749079	.	-	0	ID=cds695;Parent=gene704;Dbxref=Genbank:WP_002213778.1;Name=WP_002213778.1;gbkey=CDS;product=pilus assembly protein CpaC;protein_id=WP_002213778.1;transl_table=11
NC_017154.1	RefSeq	gene	749076	749942	.	-	.	ID=gene705;Name=YPD4_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03535;old_locus_tag=YPD4_0604
NC_017154.1	Protein Homology	CDS	749076	749942	.	-	0	ID=cds696;Parent=gene705;Dbxref=Genbank:WP_002211460.1;Name=WP_002211460.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211460.1;transl_table=11
NC_017154.1	RefSeq	gene	749994	750416	.	-	.	ID=gene706;Name=YPD4_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03540;old_locus_tag=YPD4_0605
NC_017154.1	Protein Homology	CDS	749994	750416	.	-	0	ID=cds697;Parent=gene706;Dbxref=Genbank:WP_002211459.1;Name=WP_002211459.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211459.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	750466	751895	.	+	.	ID=id51;gbkey=repeat_region
NC_017154.1	RefSeq	gene	750616	751074	.	+	.	ID=gene707;Name=YPD4_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03545;old_locus_tag=YPD4_0606
NC_017154.1	Protein Homology	CDS	750616	751074	.	+	0	ID=cds698;Parent=gene707;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	751164	751337	.	+	.	ID=gene708;Name=YPD4_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03550
NC_017154.1	Protein Homology	CDS	751164	751337	.	+	0	ID=cds699;Parent=gene708;Dbxref=Genbank:WP_002216755.1;Name=WP_002216755.1;gbkey=CDS;product=invasin;protein_id=WP_002216755.1;transl_table=11
NC_017154.1	RefSeq	gene	751327	751785	.	+	.	ID=gene709;Name=YPD4_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03555;old_locus_tag=YPD4_0607
NC_017154.1	Protein Homology	CDS	751327	751785	.	+	0	ID=cds700;Parent=gene709;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	752138	754618	.	+	.	ID=gene710;Name=YPD4_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03560;old_locus_tag=YPD4_0608
NC_017154.1	Protein Homology	CDS	752138	754618	.	+	0	ID=cds701;Parent=gene710;Dbxref=Genbank:WP_002211458.1;Name=WP_002211458.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002211458.1;transl_table=11
NC_017154.1	RefSeq	gene	754636	755355	.	+	.	ID=gene711;Name=YPD4_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03565;old_locus_tag=YPD4_0609
NC_017154.1	Protein Homology	CDS	754636	755355	.	+	0	ID=cds702;Parent=gene711;Dbxref=Genbank:WP_002211457.1;Name=WP_002211457.1;gbkey=CDS;product=fimbrial chaperone protein;protein_id=WP_002211457.1;transl_table=11
NC_017154.1	RefSeq	gene	755380	756486	.	+	.	ID=gene712;Name=YPD4_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03570;old_locus_tag=YPD4_0610
NC_017154.1	Protein Homology	CDS	755380	756486	.	+	0	ID=cds703;Parent=gene712;Dbxref=Genbank:WP_002211456.1;Name=WP_002211456.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211456.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	756533	756670	.	+	.	ID=id52;gbkey=repeat_region
NC_017154.1	RefSeq	gene	756698	757777	.	-	.	ID=gene713;Name=YPD4_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03575;old_locus_tag=YPD4_0611
NC_017154.1	Protein Homology	CDS	756698	757777	.	-	0	ID=cds704;Parent=gene713;Dbxref=Genbank:WP_002211455.1;Name=WP_002211455.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211455.1;transl_table=11
NC_017154.1	RefSeq	gene	758633	759628	.	+	.	ID=gene714;Name=YPD4_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03580;old_locus_tag=YPD4_0612
NC_017154.1	Protein Homology	CDS	758633	759628	.	+	0	ID=cds705;Parent=gene714;Dbxref=Genbank:WP_002211454.1;Name=WP_002211454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211454.1;transl_table=11
NC_017154.1	RefSeq	gene	759720	760289	.	-	.	ID=gene715;Name=YPD4_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03585
NC_017154.1	Protein Homology	CDS	759720	760289	.	-	0	ID=cds706;Parent=gene715;Dbxref=Genbank:WP_002228082.1;Name=WP_002228082.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002228082.1;transl_table=11
NC_017154.1	RefSeq	gene	760519	762616	.	-	.	ID=gene716;Name=YPD4_RS03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03590;pseudo=true
NC_017154.1	Protein Homology	CDS	760519	762616	.	-	0	ID=cds707;Parent=gene716;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	762603	763736	.	-	.	ID=gene717;Name=YPD4_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03595;old_locus_tag=YPD4_0615
NC_017154.1	Protein Homology	CDS	762603	763736	.	-	0	ID=cds708;Parent=gene717;Dbxref=Genbank:WP_002211451.1;Name=WP_002211451.1;gbkey=CDS;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211451.1;transl_table=11
NC_017154.1	RefSeq	gene	763736	764509	.	-	.	ID=gene718;Name=YPD4_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03600;old_locus_tag=YPD4_0616
NC_017154.1	Protein Homology	CDS	763736	764509	.	-	0	ID=cds709;Parent=gene718;Dbxref=Genbank:WP_002213766.1;Name=WP_002213766.1;gbkey=CDS;product=flagellar biosynthesis protein FliR;protein_id=WP_002213766.1;transl_table=11
NC_017154.1	RefSeq	gene	764516	764788	.	-	.	ID=gene719;Name=YPD4_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03605
NC_017154.1	Protein Homology	CDS	764516	764788	.	-	0	ID=cds710;Parent=gene719;Dbxref=Genbank:WP_002211449.1;Name=WP_002211449.1;gbkey=CDS;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211449.1;transl_table=11
NC_017154.1	RefSeq	gene	764790	765560	.	-	.	ID=gene720;Name=YPD4_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03610;old_locus_tag=YPD4_0617
NC_017154.1	Protein Homology	CDS	764790	765560	.	-	0	ID=cds711;Parent=gene720;Dbxref=Genbank:WP_002211448.1;Name=WP_002211448.1;gbkey=CDS;product=flagellar biosynthesis protein FliP;protein_id=WP_002211448.1;transl_table=11
NC_017154.1	RefSeq	gene	765557	765970	.	-	.	ID=gene721;Name=YPD4_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03615;old_locus_tag=YPD4_0618
NC_017154.1	Protein Homology	CDS	765557	765970	.	-	0	ID=cds712;Parent=gene721;Dbxref=Genbank:WP_002211447.1;Name=WP_002211447.1;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=WP_002211447.1;transl_table=11
NC_017154.1	RefSeq	gene	765963	766862	.	-	.	ID=gene722;Name=YPD4_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03620;old_locus_tag=YPD4_0619
NC_017154.1	Protein Homology	CDS	765963	766862	.	-	0	ID=cds713;Parent=gene722;Dbxref=Genbank:WP_002211446.1;Name=WP_002211446.1;gbkey=CDS;product=flagellar motor switch protein FliM;protein_id=WP_002211446.1;transl_table=11
NC_017154.1	RefSeq	gene	767385	768413	.	+	.	ID=gene723;Name=YPD4_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03625;old_locus_tag=YPD4_0620
NC_017154.1	Protein Homology	CDS	767385	768413	.	+	0	ID=cds714;Parent=gene723;Dbxref=Genbank:WP_002211445.1;Name=WP_002211445.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002211445.1;transl_table=11
NC_017154.1	RefSeq	gene	768430	768810	.	+	.	ID=gene724;Name=YPD4_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03630;old_locus_tag=YPD4_0621
NC_017154.1	Protein Homology	CDS	768430	768810	.	+	0	ID=cds715;Parent=gene724;Dbxref=Genbank:WP_002211444.1;Name=WP_002211444.1;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=WP_002211444.1;transl_table=11
NC_017154.1	RefSeq	gene	768820	770460	.	+	.	ID=gene725;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=YPD4_RS03635;old_locus_tag=YPD4_0622
NC_017154.1	Protein Homology	CDS	768820	770460	.	+	0	ID=cds716;Parent=gene725;Dbxref=Genbank:WP_002211443.1;Name=WP_002211443.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=fliF;product=flagellar M-ring protein FliF;protein_id=WP_002211443.1;transl_table=11
NC_017154.1	RefSeq	gene	770432	771475	.	+	.	ID=gene726;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPD4_RS03640;old_locus_tag=YPD4_0623
NC_017154.1	Protein Homology	CDS	770432	771475	.	+	0	ID=cds717;Parent=gene726;Dbxref=Genbank:WP_002211442.1;Name=WP_002211442.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211442.1;transl_table=11
NC_017154.1	RefSeq	gene	771480	772196	.	+	.	ID=gene727;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPD4_RS03645;old_locus_tag=YPD4_0624
NC_017154.1	Protein Homology	CDS	771480	772196	.	+	0	ID=cds718;Parent=gene727;Dbxref=Genbank:WP_002213763.1;Name=WP_002213763.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=WP_002213763.1;transl_table=11
NC_017154.1	RefSeq	gene	772189	773529	.	+	.	ID=gene728;Name=YPD4_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03650;old_locus_tag=YPD4_0625
NC_017154.1	Protein Homology	CDS	772189	773529	.	+	0	ID=cds719;Parent=gene728;Dbxref=Genbank:WP_002211440.1;Name=WP_002211440.1;gbkey=CDS;product=flagellum-specific ATP synthase;protein_id=WP_002211440.1;transl_table=11
NC_017154.1	RefSeq	gene	773533	773970	.	+	.	ID=gene729;Name=YPD4_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03655;old_locus_tag=YPD4_0626
NC_017154.1	Protein Homology	CDS	773533	773970	.	+	0	ID=cds720;Parent=gene729;Dbxref=Genbank:WP_002223686.1;Name=WP_002223686.1;gbkey=CDS;product=flagellar export protein FliJ;protein_id=WP_002223686.1;transl_table=11
NC_017154.1	RefSeq	gene	774298	774723	.	-	.	ID=gene730;Name=YPD4_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03660;old_locus_tag=YPD4_0627
NC_017154.1	Protein Homology	CDS	774298	774723	.	-	0	ID=cds721;Parent=gene730;Dbxref=Genbank:WP_002211438.1;Name=WP_002211438.1;gbkey=CDS;product=flagellar protein FlgN;protein_id=WP_002211438.1;transl_table=11
NC_017154.1	RefSeq	gene	774730	774996	.	-	.	ID=gene731;Name=YPD4_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03665
NC_017154.1	Protein Homology	CDS	774730	774996	.	-	0	ID=cds722;Parent=gene731;Dbxref=Genbank:WP_002211437.1;Name=WP_002211437.1;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211437.1;transl_table=11
NC_017154.1	RefSeq	gene	775225	776073	.	-	.	ID=gene732;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YPD4_RS03670;old_locus_tag=YPD4_0628
NC_017154.1	Protein Homology	CDS	775225	776073	.	-	0	ID=cds723;Parent=gene732;Dbxref=Genbank:WP_002211436.1;Name=WP_002211436.1;Note=required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002211436.1;transl_table=11
NC_017154.1	RefSeq	gene	776131	776577	.	+	.	ID=gene733;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=YPD4_RS03675;old_locus_tag=YPD4_0629
NC_017154.1	Protein Homology	CDS	776131	776577	.	+	0	ID=cds724;Parent=gene733;Dbxref=Genbank:WP_002211435.1;Name=WP_002211435.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211435.1;transl_table=11
NC_017154.1	RefSeq	gene	776580	777005	.	+	.	ID=gene734;Name=YPD4_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03680;old_locus_tag=YPD4_0630
NC_017154.1	Protein Homology	CDS	776580	777005	.	+	0	ID=cds725;Parent=gene734;Dbxref=Genbank:WP_002211434.1;Name=WP_002211434.1;gbkey=CDS;product=flagellar basal body rod protein FlgC;protein_id=WP_002211434.1;transl_table=11
NC_017154.1	RefSeq	gene	777008	777664	.	+	.	ID=gene735;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPD4_RS03685;old_locus_tag=YPD4_0631
NC_017154.1	Protein Homology	CDS	777008	777664	.	+	0	ID=cds726;Parent=gene735;Dbxref=Genbank:WP_002211433.1;Name=WP_002211433.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein FlgD;protein_id=WP_002211433.1;transl_table=11
NC_017154.1	RefSeq	gene	777719	778960	.	+	.	ID=gene736;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPD4_RS03690;old_locus_tag=YPD4_0632
NC_017154.1	Protein Homology	CDS	777719	778960	.	+	0	ID=cds727;Parent=gene736;Dbxref=Genbank:WP_002211432.1;Name=WP_002211432.1;Note=the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211432.1;transl_table=11
NC_017154.1	RefSeq	gene	778960	779148	.	+	.	ID=gene737;Name=YPD4_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03695
NC_017154.1	Protein Homology	CDS	778960	779148	.	+	0	ID=cds728;Parent=gene737;Dbxref=Genbank:WP_002213760.1;Name=WP_002213760.1;gbkey=CDS;product=flagellar basal-body rod protein FlgF;protein_id=WP_002213760.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	779073	779791	.	+	.	ID=id53;gbkey=repeat_region
NC_017154.1	RefSeq	gene	779184	779642	.	-	.	ID=gene738;Name=YPD4_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03700;old_locus_tag=YPD4_0633
NC_017154.1	Protein Homology	CDS	779184	779642	.	-	0	ID=cds729;Parent=gene738;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	779632	779805	.	-	.	ID=gene739;Name=YPD4_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03705
NC_017154.1	Protein Homology	CDS	779632	779805	.	-	0	ID=cds730;Parent=gene739;Dbxref=Genbank:WP_025470745.1;Name=WP_025470745.1;gbkey=CDS;product=transposase;protein_id=WP_025470745.1;transl_table=11
NC_017154.1	RefSeq	gene	779809	780402	.	+	.	ID=gene740;Name=YPD4_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03710;old_locus_tag=YPD4_0634
NC_017154.1	Protein Homology	CDS	779809	780402	.	+	0	ID=cds731;Parent=gene740;Dbxref=Genbank:WP_002211431.1;Name=WP_002211431.1;gbkey=CDS;product=flagellar basal body rod protein FlgF;protein_id=WP_002211431.1;transl_table=11
NC_017154.1	RefSeq	gene	780470	781255	.	+	.	ID=gene741;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YPD4_RS03715;old_locus_tag=YPD4_0635
NC_017154.1	Protein Homology	CDS	780470	781255	.	+	0	ID=cds732;Parent=gene741;Dbxref=Genbank:WP_002211430.1;Name=WP_002211430.1;Note=makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_002211430.1;transl_table=11
NC_017154.1	RefSeq	gene	781290	781955	.	+	.	ID=gene742;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=YPD4_RS03720;old_locus_tag=YPD4_0636
NC_017154.1	Protein Homology	CDS	781290	781955	.	+	0	ID=cds733;Parent=gene742;Dbxref=Genbank:WP_002211429.1;Name=WP_002211429.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH;gbkey=CDS;gene=flgH;product=flagellar L-ring protein FlgH;protein_id=WP_002211429.1;transl_table=11
NC_017154.1	RefSeq	gene	782002	783144	.	+	.	ID=gene743;Name=YPD4_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03725;old_locus_tag=YPD4_0637
NC_017154.1	Protein Homology	CDS	782002	783144	.	+	0	ID=cds734;Parent=gene743;Dbxref=Genbank:WP_042468851.1;Name=WP_042468851.1;gbkey=CDS;product=flagellar P-ring protein FlgI;protein_id=WP_042468851.1;transl_table=11
NC_017154.1	RefSeq	gene	783154	783447	.	+	.	ID=gene744;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPD4_RS03730
NC_017154.1	Protein Homology	CDS	783154	783447	.	+	0	ID=cds735;Parent=gene744;Dbxref=Genbank:WP_002211427.1;Name=WP_002211427.1;Note=FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase;protein_id=WP_002211427.1;transl_table=11
NC_017154.1	RefSeq	gene	783560	784921	.	+	.	ID=gene745;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPD4_RS03735;old_locus_tag=YPD4_0638
NC_017154.1	Protein Homology	CDS	783560	784921	.	+	0	ID=cds736;Parent=gene745;Dbxref=Genbank:WP_002211426.1;Name=WP_002211426.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211426.1;transl_table=11
NC_017154.1	RefSeq	gene	784950	785873	.	+	.	ID=gene746;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPD4_RS03740;old_locus_tag=YPD4_0639
NC_017154.1	Protein Homology	CDS	784950	785873	.	+	0	ID=cds737;Parent=gene746;Dbxref=Genbank:WP_002211425.1;Name=WP_002211425.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211425.1;transl_table=11
NC_017154.1	RefSeq	gene	785885	786898	.	+	.	ID=gene747;Name=YPD4_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03745;old_locus_tag=YPD4_0640
NC_017154.1	Protein Homology	CDS	785885	786898	.	+	0	ID=cds738;Parent=gene747;Dbxref=Genbank:WP_002211424.1;Name=WP_002211424.1;gbkey=CDS;product=flagellar hook associated protein lafW;protein_id=WP_002211424.1;transl_table=11
NC_017154.1	RefSeq	gene	787062	787508	.	-	.	ID=gene748;Name=YPD4_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03750;old_locus_tag=YPD4_0641
NC_017154.1	Protein Homology	CDS	787062	787508	.	-	0	ID=cds739;Parent=gene748;Dbxref=Genbank:WP_002211423.1;Name=WP_002211423.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211423.1;transl_table=11
NC_017154.1	RefSeq	gene	787489	788535	.	-	.	ID=gene749;Name=YPD4_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03755;old_locus_tag=YPD4_0642
NC_017154.1	Protein Homology	CDS	787489	788535	.	-	0	ID=cds740;Parent=gene749;Dbxref=Genbank:WP_002211422.1;Name=WP_002211422.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211422.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	789159	789690	.	+	.	ID=id54;gbkey=repeat_region
NC_017154.1	RefSeq	gene	789161	790375	.	+	.	ID=gene750;Name=YPD4_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03760;old_locus_tag=YPD4_0643
NC_017154.1	Protein Homology	CDS	789161	790375	.	+	0	ID=cds741;Parent=gene750;Dbxref=Genbank:WP_002213753.1;Name=WP_002213753.1;gbkey=CDS;product=flagellin;protein_id=WP_002213753.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	790067	790444	.	+	.	ID=id55;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	790645	791416	.	+	.	ID=id56;gbkey=repeat_region
NC_017154.1	RefSeq	gene	790890	792089	.	+	.	ID=gene751;Name=YPD4_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03765;old_locus_tag=YPD4_0644
NC_017154.1	Protein Homology	CDS	790890	792089	.	+	0	ID=cds742;Parent=gene751;Dbxref=Genbank:WP_002211420.1;Name=WP_002211420.1;gbkey=CDS;product=flagellin;protein_id=WP_002211420.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	791522	792901	.	+	.	ID=id57;gbkey=repeat_region
NC_017154.1	RefSeq	gene	792372	793577	.	+	.	ID=gene752;Name=YPD4_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03770;old_locus_tag=YPD4_0645
NC_017154.1	Protein Homology	CDS	792372	793577	.	+	0	ID=cds743;Parent=gene752;Dbxref=Genbank:WP_002211419.1;Name=WP_002211419.1;gbkey=CDS;product=flagellin;protein_id=WP_002211419.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	793010	793585	.	+	.	ID=id58;gbkey=repeat_region
NC_017154.1	RefSeq	gene	793797	795074	.	+	.	ID=gene753;Name=YPD4_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03775;old_locus_tag=YPD4_0646
NC_017154.1	Protein Homology	CDS	793797	795074	.	+	0	ID=cds744;Parent=gene753;Dbxref=Genbank:WP_002211418.1;Name=WP_002211418.1;gbkey=CDS;product=flagellar hook-associated protein;protein_id=WP_002211418.1;transl_table=11
NC_017154.1	RefSeq	gene	795084	795464	.	+	.	ID=gene754;Name=YPD4_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03780;old_locus_tag=YPD4_0647
NC_017154.1	Protein Homology	CDS	795084	795464	.	+	0	ID=cds745;Parent=gene754;Dbxref=Genbank:WP_002211417.1;Name=WP_002211417.1;gbkey=CDS;product=flagellar export chaperone FliS;protein_id=WP_002211417.1;transl_table=11
NC_017154.1	RefSeq	gene	795466	795792	.	+	.	ID=gene755;Name=YPD4_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03785;old_locus_tag=YPD4_0648
NC_017154.1	Protein Homology	CDS	795466	795792	.	+	0	ID=cds746;Parent=gene755;Dbxref=Genbank:WP_002211416.1;Name=WP_002211416.1;gbkey=CDS;product=flagellar protein lafD;protein_id=WP_002211416.1;transl_table=11
NC_017154.1	RefSeq	gene	795794	796957	.	+	.	ID=gene756;Name=YPD4_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03790;old_locus_tag=YPD4_0649
NC_017154.1	Protein Homology	CDS	795794	796957	.	+	0	ID=cds747;Parent=gene756;Dbxref=Genbank:WP_002353781.1;Name=WP_002353781.1;gbkey=CDS;product=flagellar hook-length control protein;protein_id=WP_002353781.1;transl_table=11
NC_017154.1	RefSeq	gene	796996	797466	.	+	.	ID=gene757;Name=YPD4_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03795;old_locus_tag=YPD4_0650
NC_017154.1	Protein Homology	CDS	796996	797466	.	+	0	ID=cds748;Parent=gene757;Dbxref=Genbank:WP_002211414.1;Name=WP_002211414.1;gbkey=CDS;product=flagellar protein;protein_id=WP_002211414.1;transl_table=11
NC_017154.1	RefSeq	gene	797472	798167	.	+	.	ID=gene758;Name=YPD4_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03800;old_locus_tag=YPD4_0651
NC_017154.1	Protein Homology	CDS	797472	798167	.	+	0	ID=cds749;Parent=gene758;Dbxref=Genbank:WP_002211413.1;Name=WP_002211413.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;product=DNA-directed RNA polymerase sigma-70 factor;protein_id=WP_002211413.1;transl_table=11
NC_017154.1	RefSeq	gene	798183	799049	.	+	.	ID=gene759;Name=YPD4_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03805;old_locus_tag=YPD4_0652
NC_017154.1	Protein Homology	CDS	798183	799049	.	+	0	ID=cds750;Parent=gene759;Dbxref=Genbank:WP_002213750.1;Name=WP_002213750.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_002213750.1;transl_table=11
NC_017154.1	RefSeq	gene	799049	799960	.	+	.	ID=gene760;Name=YPD4_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03810;old_locus_tag=YPD4_0653
NC_017154.1	Protein Homology	CDS	799049	799960	.	+	0	ID=cds751;Parent=gene760;Dbxref=Genbank:WP_002211411.1;Name=WP_002211411.1;gbkey=CDS;product=flagellar motor protein B;protein_id=WP_002211411.1;transl_table=11
NC_017154.1	RefSeq	gene	800029	800217	.	+	.	ID=gene761;Name=YPD4_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03815
NC_017154.1	Protein Homology	CDS	800029	800217	.	+	0	ID=cds752;Parent=gene761;Dbxref=Genbank:WP_002213749.1;Name=WP_002213749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213749.1;transl_table=11
NC_017154.1	RefSeq	gene	800420	801016	.	+	.	ID=gene762;Name=YPD4_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03820;old_locus_tag=YPD4_0654
NC_017154.1	Protein Homology	CDS	800420	801016	.	+	0	ID=cds753;Parent=gene762;Dbxref=Genbank:WP_002211410.1;Name=WP_002211410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211410.1;transl_table=11
NC_017154.1	RefSeq	gene	801013	801468	.	+	.	ID=gene763;Name=YPD4_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03825;old_locus_tag=YPD4_0655
NC_017154.1	Protein Homology	CDS	801013	801468	.	+	0	ID=cds754;Parent=gene763;Dbxref=Genbank:WP_002211409.1;Name=WP_002211409.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211409.1;transl_table=11
NC_017154.1	RefSeq	gene	801566	801823	.	+	.	ID=gene764;Name=YPD4_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03830
NC_017154.1	Protein Homology	CDS	801566	801823	.	+	0	ID=cds755;Parent=gene764;Dbxref=Genbank:WP_002353780.1;Name=WP_002353780.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353780.1;transl_table=11
NC_017154.1	RefSeq	gene	801976	802445	.	-	.	ID=gene765;Name=YPD4_RS03835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03835;pseudo=true
NC_017154.1	Protein Homology	CDS	801976	802445	.	-	0	ID=cds756;Parent=gene765;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	802695	802997	.	-	.	ID=gene766;Name=YPD4_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03840
NC_017154.1	Protein Homology	CDS	802695	802997	.	-	0	ID=cds757;Parent=gene766;Dbxref=Genbank:WP_002213746.1;Name=WP_002213746.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213746.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	803555	805002	.	+	.	ID=id59;gbkey=repeat_region
NC_017154.1	RefSeq	gene	803610	804125	.	+	.	ID=gene767;Name=YPD4_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03845;old_locus_tag=YPD4_0656
NC_017154.1	Protein Homology	CDS	803610	804125	.	+	0	ID=cds758;Parent=gene767;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11
NC_017154.1	RefSeq	gene	804179	804965	.	+	.	ID=gene768;Name=YPD4_RS03850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03850;pseudo=true
NC_017154.1	Protein Homology	CDS	804179	804965	.	+	0	ID=cds759;Parent=gene768;exception=annotated by transcript or proteomic data;gbkey=CDS;product=integrase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	804855	806018	.	-	.	ID=gene769;Name=YPD4_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03855;old_locus_tag=YPD4_0658
NC_017154.1	Protein Homology	CDS	804855	806018	.	-	0	ID=cds760;Parent=gene769;Dbxref=Genbank:WP_002211407.1;Name=WP_002211407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211407.1;transl_table=11
NC_017154.1	RefSeq	gene	806312	807332	.	+	.	ID=gene770;Name=YPD4_RS03860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03860;pseudo=true
NC_017154.1	Protein Homology	CDS	806312	807332	.	+	0	ID=cds761;Parent=gene770;exception=annotated by transcript or proteomic data;gbkey=CDS;product=LacI family transcriptional regulator;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	807614	808984	.	+	.	ID=gene771;Name=YPD4_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03865;old_locus_tag=YPD4_0660
NC_017154.1	Protein Homology	CDS	807614	808984	.	+	0	ID=cds762;Parent=gene771;Dbxref=Genbank:WP_002211405.1;Name=WP_002211405.1;gbkey=CDS;product=transporter divalent anion:Na+ symporter (DASS) family;protein_id=WP_002211405.1;transl_table=11
NC_017154.1	RefSeq	gene	809164	809577	.	-	.	ID=gene772;Name=YPD4_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03870;old_locus_tag=YPD4_0661
NC_017154.1	Protein Homology	CDS	809164	809577	.	-	0	ID=cds763;Parent=gene772;Dbxref=Genbank:WP_002211404.1;Name=WP_002211404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211404.1;transl_table=11
NC_017154.1	RefSeq	gene	810121	810363	.	-	.	ID=gene773;Name=YPD4_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03875
NC_017154.1	Protein Homology	CDS	810121	810363	.	-	0	ID=cds764;Parent=gene773;Dbxref=Genbank:WP_002211403.1;Name=WP_002211403.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211403.1;transl_table=11
NC_017154.1	RefSeq	gene	810638	814954	.	-	.	ID=gene774;Name=YPD4_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03880;old_locus_tag=YPD4_0662
NC_017154.1	Protein Homology	CDS	810638	814954	.	-	0	ID=cds765;Parent=gene774;Dbxref=Genbank:WP_002211402.1;Name=WP_002211402.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002211402.1;transl_table=11
NC_017154.1	RefSeq	gene	814968	816287	.	-	.	ID=gene775;Name=YPD4_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03885;old_locus_tag=YPD4_0663
NC_017154.1	Protein Homology	CDS	814968	816287	.	-	0	ID=cds766;Parent=gene775;Dbxref=Genbank:WP_002211401.1;Name=WP_002211401.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211401.1;transl_table=11
NC_017154.1	RefSeq	gene	816313	818538	.	-	.	ID=gene776;Name=YPD4_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03890;old_locus_tag=YPD4_0664
NC_017154.1	Protein Homology	CDS	816313	818538	.	-	0	ID=cds767;Parent=gene776;Dbxref=Genbank:WP_002211400.1;Name=WP_002211400.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002211400.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	819074	821234	.	+	.	ID=id60;gbkey=repeat_region
NC_017154.1	RefSeq	gene	819124	822893	.	-	.	ID=gene777;Name=YPD4_RS03895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS03895;old_locus_tag=YPD4_0666;pseudo=true
NC_017154.1	Protein Homology	CDS	819124	822893	.	-	0	ID=cds768;Parent=gene777;exception=annotated by transcript or proteomic data;gbkey=CDS;product=autotransporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	823499	825660	.	+	.	ID=id61;gbkey=repeat_region
NC_017154.1	RefSeq	gene	823549	825549	.	-	.	ID=gene778;Name=YPD4_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03900;old_locus_tag=YPD4_0667
NC_017154.1	Protein Homology	CDS	823549	825549	.	-	0	ID=cds769;Parent=gene778;Dbxref=Genbank:WP_002228666.1;Name=WP_002228666.1;gbkey=CDS;product=adhesin;protein_id=WP_002228666.1;transl_table=11
NC_017154.1	RefSeq	gene	825654	827312	.	-	.	ID=gene779;Name=YPD4_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03905;old_locus_tag=YPD4_0668
NC_017154.1	Protein Homology	CDS	825654	827312	.	-	0	ID=cds770;Parent=gene779;Dbxref=Genbank:WP_002213742.1;Name=WP_002213742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213742.1;transl_table=11
NC_017154.1	RefSeq	gene	828313	829656	.	-	.	ID=gene780;Name=YPD4_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03910;old_locus_tag=YPD4_0669
NC_017154.1	Protein Homology	CDS	828313	829656	.	-	0	ID=cds771;Parent=gene780;Dbxref=Genbank:WP_002223676.1;Name=WP_002223676.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002223676.1;transl_table=11
NC_017154.1	RefSeq	gene	831196	831594	.	+	.	ID=gene781;Name=YPD4_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03915;old_locus_tag=YPD4_0670
NC_017154.1	Protein Homology	CDS	831196	831594	.	+	0	ID=cds772;Parent=gene781;Dbxref=Genbank:WP_002228079.1;Name=WP_002228079.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228079.1;transl_table=11
NC_017154.1	RefSeq	gene	832030	832905	.	+	.	ID=gene782;Name=YPD4_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03920;old_locus_tag=YPD4_0671
NC_017154.1	Protein Homology	CDS	832030	832905	.	+	0	ID=cds773;Parent=gene782;Dbxref=Genbank:WP_002211395.1;Name=WP_002211395.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211395.1;transl_table=11
NC_017154.1	RefSeq	gene	833228	834985	.	-	.	ID=gene783;Name=YPD4_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03925;old_locus_tag=YPD4_0672
NC_017154.1	Protein Homology	CDS	833228	834985	.	-	0	ID=cds774;Parent=gene783;Dbxref=Genbank:WP_002211394.1;Name=WP_002211394.1;gbkey=CDS;product=sulfate ABC transporter permease;protein_id=WP_002211394.1;transl_table=11
NC_017154.1	RefSeq	gene	834982	836751	.	-	.	ID=gene784;Name=YPD4_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03930;old_locus_tag=YPD4_0673
NC_017154.1	Protein Homology	CDS	834982	836751	.	-	0	ID=cds775;Parent=gene784;Dbxref=Genbank:WP_044023331.1;Name=WP_044023331.1;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=WP_044023331.1;transl_table=11
NC_017154.1	RefSeq	gene	836751	838055	.	-	.	ID=gene785;Name=YPD4_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03935;old_locus_tag=YPD4_0674
NC_017154.1	Protein Homology	CDS	836751	838055	.	-	0	ID=cds776;Parent=gene785;Dbxref=Genbank:WP_002211392.1;Name=WP_002211392.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211392.1;transl_table=11
NC_017154.1	RefSeq	gene	838045	838809	.	-	.	ID=gene786;Name=YPD4_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03940;old_locus_tag=YPD4_0675
NC_017154.1	Protein Homology	CDS	838045	838809	.	-	0	ID=cds777;Parent=gene786;Dbxref=Genbank:WP_002214925.1;Name=WP_002214925.1;gbkey=CDS;product=thioesterase;protein_id=WP_002214925.1;transl_table=11
NC_017154.1	RefSeq	gene	838802	839929	.	-	.	ID=gene787;Name=YPD4_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03945;old_locus_tag=YPD4_0676
NC_017154.1	Protein Homology	CDS	838802	839929	.	-	0	ID=cds778;Parent=gene787;Dbxref=Genbank:WP_002211390.1;Name=WP_002211390.1;gbkey=CDS;product=thiazolinyl imide reductase;protein_id=WP_002211390.1;transl_table=11
NC_017154.1	RefSeq	gene	839926	841002	.	-	.	ID=gene788;Name=YPD4_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03950;old_locus_tag=YPD4_0677
NC_017154.1	Protein Homology	CDS	839926	841002	.	-	0	ID=cds779;Parent=gene788;Dbxref=Genbank:WP_002211389.1;Name=WP_002211389.1;gbkey=CDS;product=saccharopine dehydrogenase;protein_id=WP_002211389.1;transl_table=11
NC_017154.1	RefSeq	gene	840999	846791	.	-	.	ID=gene789;Name=YPD4_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03955;old_locus_tag=YPD4_0678
NC_017154.1	Protein Homology	CDS	840999	846791	.	-	0	ID=cds780;Parent=gene789;Dbxref=Genbank:WP_015683867.1;Name=WP_015683867.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_015683867.1;transl_table=11
NC_017154.1	RefSeq	gene	846804	848492	.	-	.	ID=gene790;Name=YPD4_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03960;old_locus_tag=YPD4_0679
NC_017154.1	Protein Homology	CDS	846804	848492	.	-	0	ID=cds781;Parent=gene790;Dbxref=Genbank:WP_002214915.1;Name=WP_002214915.1;gbkey=CDS;product=high molecular weight siderophore biosynthesis protein;protein_id=WP_002214915.1;transl_table=11
NC_017154.1	RefSeq	gene	848500	854958	.	-	.	ID=gene791;Name=YPD4_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03965;old_locus_tag=YPD4_0680
NC_017154.1	Protein Homology	CDS	848500	854958	.	-	0	ID=cds782;Parent=gene791;Dbxref=Genbank:WP_002211387.1;Name=WP_002211387.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_002211387.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	855096	857055	.	+	.	ID=id62;gbkey=repeat_region
NC_017154.1	RefSeq	gene	855166	855945	.	-	.	ID=gene792;Name=YPD4_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03970;old_locus_tag=YPD4_0681
NC_017154.1	Protein Homology	CDS	855166	855945	.	-	0	ID=cds783;Parent=gene792;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	855945	856967	.	-	.	ID=gene793;Name=YPD4_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03975;old_locus_tag=YPD4_0682
NC_017154.1	Protein Homology	CDS	855945	856967	.	-	0	ID=cds784;Parent=gene793;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	856981	860394	.	-	.	ID=gene794;Name=YPD4_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03980;old_locus_tag=YPD4_0683
NC_017154.1	Protein Homology	CDS	856981	860394	.	-	0	ID=cds785;Parent=gene794;Dbxref=Genbank:WP_002211631.1;Name=WP_002211631.1;gbkey=CDS;product=peptide synthetase;protein_id=WP_002211631.1;transl_table=11
NC_017154.1	RefSeq	gene	860545	862617	.	-	.	ID=gene795;Name=YPD4_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03985;old_locus_tag=YPD4_0684
NC_017154.1	Protein Homology	CDS	860545	862617	.	-	0	ID=cds786;Parent=gene795;Dbxref=Genbank:WP_002211632.1;Name=WP_002211632.1;gbkey=CDS;product=ligand-gated channel;protein_id=WP_002211632.1;transl_table=11
NC_017154.1	RefSeq	gene	863005	864237	.	-	.	ID=gene796;Name=YPD4_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03990;old_locus_tag=YPD4_0685
NC_017154.1	Protein Homology	CDS	863005	864237	.	-	0	ID=cds787;Parent=gene796;Dbxref=Genbank:WP_002211633.1;Name=WP_002211633.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;product=peptidase T;protein_id=WP_002211633.1;transl_table=11
NC_017154.1	RefSeq	gene	864315	865871	.	-	.	ID=gene797;Name=YPD4_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS03995;old_locus_tag=YPD4_0686
NC_017154.1	Protein Homology	CDS	864315	865871	.	-	0	ID=cds788;Parent=gene797;Dbxref=Genbank:WP_002211634.1;Name=WP_002211634.1;gbkey=CDS;product=aminobenzoyl-glutamate transporter;protein_id=WP_002211634.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	866498	866722	.	+	.	ID=id63;gbkey=repeat_region
NC_017154.1	RefSeq	gene	866590	868407	.	+	.	ID=gene798;Name=YPD4_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04000;old_locus_tag=YPD4_0687
NC_017154.1	Protein Homology	CDS	866590	868407	.	+	0	ID=cds789;Parent=gene798;Dbxref=Genbank:WP_002211636.1;Name=WP_002211636.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211636.1;transl_table=11
NC_017154.1	RefSeq	gene	868615	869490	.	+	.	ID=gene799;Name=YPD4_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04005;old_locus_tag=YPD4_0688
NC_017154.1	Protein Homology	CDS	868615	869490	.	+	0	ID=cds790;Parent=gene799;Dbxref=Genbank:WP_002214025.1;Name=WP_002214025.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214025.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	869961	870185	.	+	.	ID=id64;gbkey=repeat_region
NC_017154.1	RefSeq	gene	870053	871933	.	+	.	ID=gene800;Name=YPD4_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04010;old_locus_tag=YPD4_0689
NC_017154.1	Protein Homology	CDS	870053	871933	.	+	0	ID=cds791;Parent=gene800;Dbxref=Genbank:WP_002211637.1;Name=WP_002211637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211637.1;transl_table=11
NC_017154.1	RefSeq	gene	872036	883153	.	-	.	ID=gene801;Name=YPD4_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04015;old_locus_tag=YPD4_0690
NC_017154.1	Protein Homology	CDS	872036	883153	.	-	0	ID=cds792;Parent=gene801;Dbxref=Genbank:WP_002211638.1;Name=WP_002211638.1;gbkey=CDS;product=autotransporter;protein_id=WP_002211638.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	874988	875616	.	+	.	ID=id65;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	875921	876306	.	+	.	ID=id66;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	876950	877405	.	+	.	ID=id67;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	877730	878115	.	+	.	ID=id68;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	878636	879264	.	+	.	ID=id69;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	879594	879922	.	+	.	ID=id70;gbkey=repeat_region
NC_017154.1	RefSeq	gene	884007	884594	.	-	.	ID=gene802;Name=YPD4_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04020;old_locus_tag=YPD4_0691
NC_017154.1	Protein Homology	CDS	884007	884594	.	-	0	ID=cds793;Parent=gene802;Dbxref=Genbank:WP_002211640.1;Name=WP_002211640.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211640.1;transl_table=11
NC_017154.1	RefSeq	gene	884872	886362	.	+	.	ID=gene803;Name=YPD4_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04025;old_locus_tag=YPD4_0692
NC_017154.1	Protein Homology	CDS	884872	886362	.	+	0	ID=cds794;Parent=gene803;Dbxref=Genbank:WP_002211641.1;Name=WP_002211641.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002211641.1;transl_table=11
NC_017154.1	RefSeq	gene	886497	889616	.	-	.	ID=gene804;Name=YPD4_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04030;old_locus_tag=YPD4_0693
NC_017154.1	Protein Homology	CDS	886497	889616	.	-	0	ID=cds795;Parent=gene804;Dbxref=Genbank:WP_002211642.1;Name=WP_002211642.1;gbkey=CDS;product=multidrug RND transporter;protein_id=WP_002211642.1;transl_table=11
NC_017154.1	RefSeq	gene	889629	890906	.	-	.	ID=gene805;Name=YPD4_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04035;old_locus_tag=YPD4_0694
NC_017154.1	Protein Homology	CDS	889629	890906	.	-	0	ID=cds796;Parent=gene805;Dbxref=Genbank:WP_002211643.1;Name=WP_002211643.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002211643.1;transl_table=11
NC_017154.1	RefSeq	gene	891345	891542	.	+	.	ID=gene806;Name=YPD4_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04040
NC_017154.1	Protein Homology	CDS	891345	891542	.	+	0	ID=cds797;Parent=gene806;Dbxref=Genbank:WP_002214016.1;Name=WP_002214016.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214016.1;transl_table=11
NC_017154.1	RefSeq	gene	891546	893912	.	+	.	ID=gene807;Name=YPD4_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04045;old_locus_tag=YPD4_0695
NC_017154.1	Protein Homology	CDS	891546	893912	.	+	0	ID=cds798;Parent=gene807;Dbxref=Genbank:WP_002214014.1;Name=WP_002214014.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002214014.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	894075	895517	.	+	.	ID=id71;gbkey=repeat_region
NC_017154.1	RefSeq	gene	894108	894893	.	-	.	ID=gene808;Name=YPD4_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04050;old_locus_tag=YPD4_0696
NC_017154.1	Protein Homology	CDS	894108	894893	.	-	0	ID=cds799;Parent=gene808;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11
NC_017154.1	RefSeq	gene	894947	895570	.	-	.	ID=gene809;Name=YPD4_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04055;old_locus_tag=YPD4_0697
NC_017154.1	Protein Homology	CDS	894947	895570	.	-	0	ID=cds800;Parent=gene809;Dbxref=Genbank:WP_042468771.1;Name=WP_042468771.1;gbkey=CDS;product=transposase;protein_id=WP_042468771.1;transl_table=11
NC_017154.1	RefSeq	gene	895734	897158	.	+	.	ID=gene810;Name=YPD4_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04060;old_locus_tag=YPD4_0698
NC_017154.1	Protein Homology	CDS	895734	897158	.	+	0	ID=cds801;Parent=gene810;Dbxref=Genbank:WP_002211645.1;Name=WP_002211645.1;gbkey=CDS;product=sodium:galactoside symporter;protein_id=WP_002211645.1;transl_table=11
NC_017154.1	RefSeq	gene	897417	899597	.	-	.	ID=gene811;Name=YPD4_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04065;old_locus_tag=YPD4_0699
NC_017154.1	Protein Homology	CDS	897417	899597	.	-	0	ID=cds802;Parent=gene811;Dbxref=Genbank:WP_002211646.1;Name=WP_002211646.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002211646.1;transl_table=11
NC_017154.1	RefSeq	gene	899669	900997	.	-	.	ID=gene812;Name=YPD4_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04070;old_locus_tag=YPD4_0700
NC_017154.1	Protein Homology	CDS	899669	900997	.	-	0	ID=cds803;Parent=gene812;Dbxref=Genbank:WP_002211647.1;Name=WP_002211647.1;gbkey=CDS;product=lysine 6-monooxygenase;protein_id=WP_002211647.1;transl_table=11
NC_017154.1	RefSeq	gene	900994	902742	.	-	.	ID=gene813;Name=YPD4_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04075;old_locus_tag=YPD4_0701
NC_017154.1	Protein Homology	CDS	900994	902742	.	-	0	ID=cds804;Parent=gene813;Dbxref=Genbank:WP_002211648.1;Name=WP_002211648.1;gbkey=CDS;product=aerobactin synthase IucC;protein_id=WP_002211648.1;transl_table=11
NC_017154.1	RefSeq	gene	902739	903689	.	-	.	ID=gene814;Name=YPD4_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04080;old_locus_tag=YPD4_0702
NC_017154.1	Protein Homology	CDS	902739	903689	.	-	0	ID=cds805;Parent=gene814;Dbxref=Genbank:WP_002211649.1;Name=WP_002211649.1;gbkey=CDS;product=N(6)-hydroxylysine O-acetyltransferase;protein_id=WP_002211649.1;transl_table=11
NC_017154.1	RefSeq	gene	903673	904743	.	-	.	ID=gene815;Name=YPD4_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04085;old_locus_tag=YPD4_0703
NC_017154.1	Protein Homology	CDS	903673	904743	.	-	0	ID=cds806;Parent=gene815;Dbxref=Genbank:WP_002228662.1;Name=WP_002228662.1;gbkey=CDS;product=aerobactin siderophore biosynthesis proteiniucA;protein_id=WP_002228662.1;transl_table=11
NC_017154.1	RefSeq	gene	904836	905444	.	-	.	ID=gene816;Name=YPD4_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04090;old_locus_tag=YPD4_0704
NC_017154.1	Protein Homology	CDS	904836	905444	.	-	0	ID=cds807;Parent=gene816;Dbxref=Genbank:WP_002214005.1;Name=WP_002214005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214005.1;transl_table=11
NC_017154.1	RefSeq	gene	905584	906808	.	+	.	ID=gene817;Name=YPD4_RS04095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS04095;pseudo=true
NC_017154.1	Protein Homology	CDS	905584	906808	.	+	0	ID=cds808;Parent=gene817;exception=annotated by transcript or proteomic data;gbkey=CDS;product=MFS transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	907098	907931	.	-	.	ID=gene818;Name=YPD4_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04100;old_locus_tag=YPD4_0706
NC_017154.1	Protein Homology	CDS	907098	907931	.	-	0	ID=cds809;Parent=gene818;Dbxref=Genbank:WP_002211652.1;Name=WP_002211652.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002211652.1;transl_table=11
NC_017154.1	RefSeq	gene	908308	909684	.	-	.	ID=gene819;Name=YPD4_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04105;old_locus_tag=YPD4_0707
NC_017154.1	Protein Homology	CDS	908308	909684	.	-	0	ID=cds810;Parent=gene819;Dbxref=Genbank:WP_002211654.1;Name=WP_002211654.1;gbkey=CDS;product=peptidase;protein_id=WP_002211654.1;transl_table=11
NC_017154.1	RefSeq	gene	910246	910989	.	+	.	ID=gene820;Name=YPD4_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04110;old_locus_tag=YPD4_0708
NC_017154.1	Protein Homology	CDS	910246	910989	.	+	0	ID=cds811;Parent=gene820;Dbxref=Genbank:WP_002211655.1;Name=WP_002211655.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211655.1;transl_table=11
NC_017154.1	RefSeq	gene	910970	911620	.	-	.	ID=gene821;Name=YPD4_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04115;old_locus_tag=YPD4_0709
NC_017154.1	Protein Homology	CDS	910970	911620	.	-	0	ID=cds812;Parent=gene821;Dbxref=Genbank:WP_002215903.1;Name=WP_002215903.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002215903.1;transl_table=11
NC_017154.1	RefSeq	gene	912795	913445	.	+	.	ID=gene822;Name=YPD4_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04120
NC_017154.1	Protein Homology	CDS	912795	913445	.	+	0	ID=cds813;Parent=gene822;Dbxref=Genbank:WP_002215902.1;Name=WP_002215902.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002215902.1;transl_table=11
NC_017154.1	RefSeq	gene	913896	914291	.	+	.	ID=gene823;Name=YPD4_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04125;old_locus_tag=YPD4_0711
NC_017154.1	Protein Homology	CDS	913896	914291	.	+	0	ID=cds814;Parent=gene823;Dbxref=Genbank:WP_002215900.1;Name=WP_002215900.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215900.1;transl_table=11
NC_017154.1	RefSeq	gene	914359	914622	.	+	.	ID=gene824;Name=YPD4_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04130
NC_017154.1	Protein Homology	CDS	914359	914622	.	+	0	ID=cds815;Parent=gene824;Dbxref=Genbank:WP_002215899.1;Name=WP_002215899.1;gbkey=CDS;product=transposase;protein_id=WP_002215899.1;transl_table=11
NC_017154.1	RefSeq	gene	914796	915167	.	+	.	ID=gene825;Name=YPD4_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04135
NC_017154.1	Protein Homology	CDS	914796	915167	.	+	0	ID=cds816;Parent=gene825;Dbxref=Genbank:WP_002215898.1;Name=WP_002215898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215898.1;transl_table=11
NC_017154.1	RefSeq	gene	915210	915365	.	+	.	ID=gene826;Name=YPD4_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04140
NC_017154.1	Protein Homology	CDS	915210	915365	.	+	0	ID=cds817;Parent=gene826;Dbxref=Genbank:WP_002211661.1;Name=WP_002211661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211661.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	916140	923007	.	+	.	ID=id72;gbkey=repeat_region
NC_017154.1	RefSeq	gene	916567	917067	.	+	.	ID=gene827;Name=YPD4_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04145;old_locus_tag=YPD4_0712
NC_017154.1	Protein Homology	CDS	916567	917067	.	+	0	ID=cds818;Parent=gene827;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11
NC_017154.1	RefSeq	gene	917110	918654	.	+	.	ID=gene828;Name=YPD4_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04150;old_locus_tag=YPD4_0713
NC_017154.1	Protein Homology	CDS	917110	918654	.	+	0	ID=cds819;Parent=gene828;Dbxref=Genbank:WP_002215896.1;Name=WP_002215896.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215896.1;transl_table=11
NC_017154.1	RefSeq	gene	918666	920018	.	+	.	ID=gene829;Name=YPD4_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04155;old_locus_tag=YPD4_0714
NC_017154.1	Protein Homology	CDS	918666	920018	.	+	0	ID=cds820;Parent=gene829;Dbxref=Genbank:WP_002211664.1;Name=WP_002211664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211664.1;transl_table=11
NC_017154.1	RefSeq	gene	920015	920701	.	+	.	ID=gene830;Name=YPD4_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04160;old_locus_tag=YPD4_0715
NC_017154.1	Protein Homology	CDS	920015	920701	.	+	0	ID=cds821;Parent=gene830;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11
NC_017154.1	RefSeq	gene	920701	922436	.	+	.	ID=gene831;Name=YPD4_RS04165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS04165;pseudo=true
NC_017154.1	Protein Homology	CDS	920701	922436	.	+	0	ID=cds822;Parent=gene831;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	922440	922931	.	+	.	ID=gene832;Name=YPD4_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04170;old_locus_tag=YPD4_0718
NC_017154.1	Protein Homology	CDS	922440	922931	.	+	0	ID=cds823;Parent=gene832;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	923300	925004	.	+	.	ID=id73;gbkey=repeat_region
NC_017154.1	RefSeq	gene	923319	925961	.	+	.	ID=gene833;Name=YPD4_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04175;old_locus_tag=YPD4_0719
NC_017154.1	Protein Homology	CDS	923319	925961	.	+	0	ID=cds824;Parent=gene833;Dbxref=Genbank:WP_002211927.1;Name=WP_002211927.1;gbkey=CDS;product=ATPase;protein_id=WP_002211927.1;transl_table=11
NC_017154.1	RefSeq	gene	925964	928312	.	+	.	ID=gene834;Name=YPD4_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04180;old_locus_tag=YPD4_0720
NC_017154.1	Protein Homology	CDS	925964	928312	.	+	0	ID=cds825;Parent=gene834;Dbxref=Genbank:WP_002211928.1;Name=WP_002211928.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002211928.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	927671	929794	.	+	.	ID=id74;gbkey=repeat_region
NC_017154.1	RefSeq	gene	928328	930625	.	+	.	ID=gene835;Name=YPD4_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04185;old_locus_tag=YPD4_0721
NC_017154.1	Protein Homology	CDS	928328	930625	.	+	0	ID=cds826;Parent=gene835;Dbxref=Genbank:WP_015683871.1;Name=WP_015683871.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683871.1;transl_table=11
NC_017154.1	RefSeq	gene	930612	931379	.	+	.	ID=gene836;Name=YPD4_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04190;old_locus_tag=YPD4_0722
NC_017154.1	Protein Homology	CDS	930612	931379	.	+	0	ID=cds827;Parent=gene836;Dbxref=Genbank:WP_002210008.1;Name=WP_002210008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210008.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	931414	932048	.	+	.	ID=id75;gbkey=repeat_region
NC_017154.1	RefSeq	gene	931628	931750	.	+	.	ID=gene837;Name=YPD4_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04195
NC_017154.1	Protein Homology	CDS	931628	931750	.	+	0	ID=cds828;Parent=gene837;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11
NC_017154.1	RefSeq	gene	931804	932172	.	+	.	ID=gene838;Name=YPD4_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04200;old_locus_tag=YPD4_0723
NC_017154.1	Protein Homology	CDS	931804	932172	.	+	0	ID=cds829;Parent=gene838;Dbxref=Genbank:WP_002263919.1;Name=WP_002263919.1;gbkey=CDS;product=transposase;protein_id=WP_002263919.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	932170	933379	.	+	.	ID=id76;gbkey=repeat_region
NC_017154.1	RefSeq	gene	932780	933415	.	+	.	ID=gene839;Name=YPD4_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04205;old_locus_tag=YPD4_0724
NC_017154.1	Protein Homology	CDS	932780	933415	.	+	0	ID=cds830;Parent=gene839;Dbxref=Genbank:WP_002210005.1;Name=WP_002210005.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210005.1;transl_table=11
NC_017154.1	RefSeq	gene	933601	933747	.	+	.	ID=gene840;Name=YPD4_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04210
NC_017154.1	Protein Homology	CDS	933601	933747	.	+	0	ID=cds831;Parent=gene840;Dbxref=Genbank:WP_002210004.1;Name=WP_002210004.1;gbkey=CDS;product=integrase;protein_id=WP_002210004.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	933995	934098	.	+	.	ID=id77;gbkey=repeat_region
NC_017154.1	RefSeq	gene	934000	934075	.	-	.	ID=gene841;Name=YPD4_RS04215;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS04215;old_locus_tag=YPD4_t7
NC_017154.1	tRNAscan-SE	tRNA	934000	934075	.	-	.	ID=rna9;Parent=gene841;anticodon=(pos:complement(934040..934042));gbkey=tRNA;product=tRNA-Phe
NC_017154.1	tRNAscan-SE	exon	934000	934075	.	-	.	ID=id78;Parent=rna9;anticodon=(pos:complement(934040..934042));gbkey=tRNA;product=tRNA-Phe
NC_017154.1	RefSeq	gene	934744	936906	.	+	.	ID=gene842;Name=YPD4_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04220;old_locus_tag=YPD4_0725
NC_017154.1	Protein Homology	CDS	934744	936906	.	+	0	ID=cds832;Parent=gene842;Dbxref=Genbank:WP_002210002.1;Name=WP_002210002.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_002210002.1;transl_table=11
NC_017154.1	RefSeq	gene	937462	938421	.	+	.	ID=gene843;Name=YPD4_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04225;old_locus_tag=YPD4_0726
NC_017154.1	Protein Homology	CDS	937462	938421	.	+	0	ID=cds833;Parent=gene843;Dbxref=Genbank:WP_002210001.1;Name=WP_002210001.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210001.1;transl_table=11
NC_017154.1	RefSeq	gene	938467	939966	.	+	.	ID=gene844;Name=YPD4_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04230;old_locus_tag=YPD4_0727
NC_017154.1	Protein Homology	CDS	938467	939966	.	+	0	ID=cds834;Parent=gene844;Dbxref=Genbank:WP_002210000.1;Name=WP_002210000.1;gbkey=CDS;product=lantibiotic ABC transporter permease;protein_id=WP_002210000.1;transl_table=11
NC_017154.1	RefSeq	gene	940047	940982	.	+	.	ID=gene845;Name=YPD4_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04235;old_locus_tag=YPD4_0728
NC_017154.1	Protein Homology	CDS	940047	940982	.	+	0	ID=cds835;Parent=gene845;Dbxref=Genbank:WP_002371953.1;Name=WP_002371953.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002371953.1;transl_table=11
NC_017154.1	RefSeq	gene	941065	943098	.	-	.	ID=gene846;Name=YPD4_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04240;old_locus_tag=YPD4_0729
NC_017154.1	Protein Homology	CDS	941065	943098	.	-	0	ID=cds836;Parent=gene846;Dbxref=Genbank:WP_002209998.1;Name=WP_002209998.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002209998.1;transl_table=11
NC_017154.1	RefSeq	gene	943202	944302	.	-	.	ID=gene847;Name=YPD4_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04245;old_locus_tag=YPD4_0730
NC_017154.1	Protein Homology	CDS	943202	944302	.	-	0	ID=cds837;Parent=gene847;Dbxref=Genbank:WP_002209997.1;Name=WP_002209997.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002209997.1;transl_table=11
NC_017154.1	RefSeq	gene	944602	945678	.	-	.	ID=gene848;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=YPD4_RS04250;old_locus_tag=YPD4_0731
NC_017154.1	Protein Homology	CDS	944602	945678	.	-	0	ID=cds838;Parent=gene848;Dbxref=Genbank:WP_002209995.1;Name=WP_002209995.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_002209995.1;transl_table=11
NC_017154.1	RefSeq	gene	945861	946133	.	-	.	ID=gene849;Name=YPD4_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04255
NC_017154.1	Protein Homology	CDS	945861	946133	.	-	0	ID=cds839;Parent=gene849;Dbxref=Genbank:WP_002209994.1;Name=WP_002209994.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=Fe(2+)-trafficking protein;protein_id=WP_002209994.1;transl_table=11
NC_017154.1	RefSeq	gene	946311	947426	.	-	.	ID=gene850;Name=YPD4_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04260;old_locus_tag=YPD4_0732
NC_017154.1	Protein Homology	CDS	946311	947426	.	-	0	ID=cds840;Parent=gene850;Dbxref=Genbank:WP_002228057.1;Name=WP_002228057.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_002228057.1;transl_table=11
NC_017154.1	RefSeq	gene	947764	948483	.	+	.	ID=gene851;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=YPD4_RS04265;old_locus_tag=YPD4_0733
NC_017154.1	Protein Homology	CDS	947764	948483	.	+	0	ID=cds841;Parent=gene851;Dbxref=Genbank:WP_002209991.1;Name=WP_002209991.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=WP_002209991.1;transl_table=11
NC_017154.1	RefSeq	gene	948483	948809	.	+	.	ID=gene852;Name=YPD4_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04270;old_locus_tag=YPD4_0734
NC_017154.1	Protein Homology	CDS	948483	948809	.	+	0	ID=cds842;Parent=gene852;Dbxref=Genbank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209990.1;transl_table=11
NC_017154.1	RefSeq	gene	948920	949846	.	+	.	ID=gene853;Name=YPD4_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04275;old_locus_tag=YPD4_0735
NC_017154.1	Protein Homology	CDS	948920	949846	.	+	0	ID=cds843;Parent=gene853;Dbxref=Genbank:WP_002209989.1;Name=WP_002209989.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_002209989.1;transl_table=11
NC_017154.1	RefSeq	gene	949958	950488	.	+	.	ID=gene854;Name=YPD4_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04280;old_locus_tag=YPD4_0736
NC_017154.1	Protein Homology	CDS	949958	950488	.	+	0	ID=cds844;Parent=gene854;Dbxref=Genbank:WP_002228656.1;Name=WP_002228656.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228656.1;transl_table=11
NC_017154.1	RefSeq	gene	950461	950691	.	+	.	ID=gene855;Name=YPD4_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04285
NC_017154.1	Protein Homology	CDS	950461	950691	.	+	0	ID=cds845;Parent=gene855;Dbxref=Genbank:WP_002228655.1;Name=WP_002228655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228655.1;transl_table=11
NC_017154.1	RefSeq	gene	951190	960522	.	+	.	ID=gene856;Name=YPD4_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04290;old_locus_tag=YPD4_0737
NC_017154.1	Protein Homology	CDS	951190	960522	.	+	0	ID=cds846;Parent=gene856;Dbxref=Genbank:WP_002224905.1;Name=WP_002224905.1;gbkey=CDS;product=phage minor structural protein;protein_id=WP_002224905.1;transl_table=11
NC_017154.1	RefSeq	gene	960712	961842	.	-	.	ID=gene857;Name=YPD4_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04295;old_locus_tag=YPD4_0738
NC_017154.1	Protein Homology	CDS	960712	961842	.	-	0	ID=cds847;Parent=gene857;Dbxref=Genbank:WP_002209987.1;Name=WP_002209987.1;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002209987.1;transl_table=11
NC_017154.1	RefSeq	gene	961835	962429	.	-	.	ID=gene858;Name=YPD4_RS04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS04300;pseudo=true
NC_017154.1	Protein Homology	CDS	961835	962429	.	-	0	ID=cds848;Parent=gene858;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=nucleoside-triphosphate diphosphatase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	962529	962819	.	-	.	ID=gene859;Name=YPD4_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04305;old_locus_tag=YPD4_0740
NC_017154.1	Protein Homology	CDS	962529	962819	.	-	0	ID=cds849;Parent=gene859;Dbxref=Genbank:WP_002215612.1;Name=WP_002215612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215612.1;transl_table=11
NC_017154.1	RefSeq	gene	962816	963370	.	-	.	ID=gene860;Name=YPD4_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04310;old_locus_tag=YPD4_0741
NC_017154.1	Protein Homology	CDS	962816	963370	.	-	0	ID=cds850;Parent=gene860;Dbxref=Genbank:WP_002209984.1;Name=WP_002209984.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209984.1;transl_table=11
NC_017154.1	RefSeq	gene	963658	964479	.	-	.	ID=gene861;Name=YPD4_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04315;old_locus_tag=YPD4_0742
NC_017154.1	Protein Homology	CDS	963658	964479	.	-	0	ID=cds851;Parent=gene861;Dbxref=Genbank:WP_002209983.1;Name=WP_002209983.1;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_002209983.1;transl_table=11
NC_017154.1	RefSeq	gene	964612	965310	.	-	.	ID=gene862;Name=YPD4_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04320;old_locus_tag=YPD4_0743
NC_017154.1	Protein Homology	CDS	964612	965310	.	-	0	ID=cds852;Parent=gene862;Dbxref=Genbank:WP_002215609.1;Name=WP_002215609.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_002215609.1;transl_table=11
NC_017154.1	RefSeq	gene	965330	966454	.	+	.	ID=gene863;Name=YPD4_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04325;old_locus_tag=YPD4_0744
NC_017154.1	Protein Homology	CDS	965330	966454	.	+	0	ID=cds853;Parent=gene863;Dbxref=Genbank:WP_002209981.1;Name=WP_002209981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209981.1;transl_table=11
NC_017154.1	RefSeq	gene	966563	967678	.	-	.	ID=gene864;Name=YPD4_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04330;old_locus_tag=YPD4_0745
NC_017154.1	Protein Homology	CDS	966563	967678	.	-	0	ID=cds854;Parent=gene864;Dbxref=Genbank:WP_002209980.1;Name=WP_002209980.1;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;gbkey=CDS;product=agmatine deiminase;protein_id=WP_002209980.1;transl_table=11
NC_017154.1	RefSeq	gene	967682	968566	.	-	.	ID=gene865;Name=YPD4_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04335;old_locus_tag=YPD4_0746
NC_017154.1	Protein Homology	CDS	967682	968566	.	-	0	ID=cds855;Parent=gene865;Dbxref=Genbank:WP_002209979.1;Name=WP_002209979.1;gbkey=CDS;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11
NC_017154.1	RefSeq	gene	968746	969168	.	-	.	ID=gene866;Name=YPD4_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04340;old_locus_tag=YPD4_0747
NC_017154.1	Protein Homology	CDS	968746	969168	.	-	0	ID=cds856;Parent=gene866;Dbxref=Genbank:WP_002209978.1;Name=WP_002209978.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_002209978.1;transl_table=11
NC_017154.1	RefSeq	gene	969168	969731	.	-	.	ID=gene867;Name=YPD4_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04345;old_locus_tag=YPD4_0748
NC_017154.1	Protein Homology	CDS	969168	969731	.	-	0	ID=cds857;Parent=gene867;Dbxref=Genbank:WP_002209977.1;Name=WP_002209977.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209977.1;transl_table=11
NC_017154.1	RefSeq	gene	969847	970806	.	-	.	ID=gene868;Name=YPD4_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04350;old_locus_tag=YPD4_0749
NC_017154.1	Protein Homology	CDS	969847	970806	.	-	0	ID=cds858;Parent=gene868;Dbxref=Genbank:WP_002209976.1;Name=WP_002209976.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_002209976.1;transl_table=11
NC_017154.1	RefSeq	gene	970832	971563	.	-	.	ID=gene869;Name=YPD4_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04355;old_locus_tag=YPD4_0750
NC_017154.1	Protein Homology	CDS	970832	971563	.	-	0	ID=cds859;Parent=gene869;Dbxref=Genbank:WP_002209975.1;Name=WP_002209975.1;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_002209975.1;transl_table=11
NC_017154.1	RefSeq	gene	971815	972522	.	-	.	ID=gene870;Name=YPD4_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04360;old_locus_tag=YPD4_0751
NC_017154.1	Protein Homology	CDS	971815	972522	.	-	0	ID=cds860;Parent=gene870;Dbxref=Genbank:WP_002209973.1;Name=WP_002209973.1;gbkey=CDS;product=endonuclease;protein_id=WP_002209973.1;transl_table=11
NC_017154.1	RefSeq	gene	972620	973132	.	-	.	ID=gene871;Name=YPD4_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04365;old_locus_tag=YPD4_0752
NC_017154.1	Protein Homology	CDS	972620	973132	.	-	0	ID=cds861;Parent=gene871;Dbxref=Genbank:WP_002228653.1;Name=WP_002228653.1;gbkey=CDS;product=Zn-dependent metalloprotease;protein_id=WP_002228653.1;transl_table=11
NC_017154.1	RefSeq	gene	973325	974479	.	-	.	ID=gene872;Name=YPD4_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04370;old_locus_tag=YPD4_0753
NC_017154.1	Protein Homology	CDS	973325	974479	.	-	0	ID=cds862;Parent=gene872;Dbxref=Genbank:WP_002209971.1;Name=WP_002209971.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthase;protein_id=WP_002209971.1;transl_table=11
NC_017154.1	RefSeq	gene	975686	977665	.	+	.	ID=gene873;Name=YPD4_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04375;old_locus_tag=YPD4_0754
NC_017154.1	Protein Homology	CDS	975686	977665	.	+	0	ID=cds863;Parent=gene873;Dbxref=Genbank:WP_002209969.1;Name=WP_002209969.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11
NC_017154.1	RefSeq	gene	977825	978145	.	+	.	ID=gene874;Name=YPD4_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04380;old_locus_tag=YPD4_0755
NC_017154.1	Protein Homology	CDS	977825	978145	.	+	0	ID=cds864;Parent=gene874;Dbxref=Genbank:WP_002209968.1;Name=WP_002209968.1;gbkey=CDS;product=(2Fe-2S)-binding protein;protein_id=WP_002209968.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	978218	978388	.	+	.	ID=id79;gbkey=repeat_region
NC_017154.1	RefSeq	gene	978435	979187	.	-	.	ID=gene875;Name=YPD4_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04385;old_locus_tag=YPD4_0756
NC_017154.1	Protein Homology	CDS	978435	979187	.	-	0	ID=cds865;Parent=gene875;Dbxref=Genbank:WP_002209967.1;Name=WP_002209967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209967.1;transl_table=11
NC_017154.1	RefSeq	gene	979678	981672	.	+	.	ID=gene876;Name=YPD4_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04390;old_locus_tag=YPD4_0757
NC_017154.1	Protein Homology	CDS	979678	981672	.	+	0	ID=cds866;Parent=gene876;Dbxref=Genbank:WP_002209965.1;Name=WP_002209965.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_002209965.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	981828	982549	.	+	.	ID=id80;gbkey=repeat_region
NC_017154.1	RefSeq	gene	981980	982438	.	+	.	ID=gene877;Name=YPD4_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04395;old_locus_tag=YPD4_0758
NC_017154.1	Protein Homology	CDS	981980	982438	.	+	0	ID=cds867;Parent=gene877;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	982779	983794	.	+	.	ID=gene878;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=pseudogene;locus_tag=YPD4_RS04400;pseudo=true
NC_017154.1	Protein Homology	CDS	982779	983794	.	+	0	ID=cds868;Parent=gene878;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=gapA;product=glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	983897	985060	.	+	.	ID=gene879;Name=YPD4_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04405;old_locus_tag=YPD4_0760
NC_017154.1	Protein Homology	CDS	983897	985060	.	+	0	ID=cds869;Parent=gene879;Dbxref=Genbank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11
NC_017154.1	RefSeq	gene	985180	986259	.	+	.	ID=gene880;Name=YPD4_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04410;old_locus_tag=YPD4_0761
NC_017154.1	Protein Homology	CDS	985180	986259	.	+	0	ID=cds870;Parent=gene880;Dbxref=Genbank:WP_002209962.1;Name=WP_002209962.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_002209962.1;transl_table=11
NC_017154.1	RefSeq	gene	986291	986581	.	-	.	ID=gene881;Name=YPD4_RS04415;gbkey=Gene;gene_biotype=other;locus_tag=YPD4_RS04415
NC_017154.1	RefSeq	repeat_region	986299	986473	.	+	.	ID=id81;gbkey=repeat_region
NC_017154.1	RefSeq	gene	986697	987566	.	+	.	ID=gene882;Name=YPD4_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04420;old_locus_tag=YPD4_0762
NC_017154.1	Protein Homology	CDS	986697	987566	.	+	0	ID=cds871;Parent=gene882;Dbxref=Genbank:WP_002209961.1;Name=WP_002209961.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=mechanosensitive ion channel protein MscS;protein_id=WP_002209961.1;transl_table=11
NC_017154.1	RefSeq	gene	987829	988446	.	+	.	ID=gene883;Name=YPD4_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04425;old_locus_tag=YPD4_0763
NC_017154.1	Protein Homology	CDS	987829	988446	.	+	0	ID=cds872;Parent=gene883;Dbxref=Genbank:WP_002209960.1;Name=WP_002209960.1;Note=Involved in the export of arginine;gbkey=CDS;product=arginine exporter protein ArgO;protein_id=WP_002209960.1;transl_table=11
NC_017154.1	RefSeq	gene	988636	989415	.	+	.	ID=gene884;Name=YPD4_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04430;old_locus_tag=YPD4_0764
NC_017154.1	Protein Homology	CDS	988636	989415	.	+	0	ID=cds873;Parent=gene884;Dbxref=Genbank:WP_002209959.1;Name=WP_002209959.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209959.1;transl_table=11
NC_017154.1	RefSeq	gene	989426	990334	.	-	.	ID=gene885;Name=YPD4_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04435;old_locus_tag=YPD4_0765
NC_017154.1	Protein Homology	CDS	989426	990334	.	-	0	ID=cds874;Parent=gene885;Dbxref=Genbank:WP_002209958.1;Name=WP_002209958.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome initiation inhibitor;protein_id=WP_002209958.1;transl_table=11
NC_017154.1	RefSeq	gene	990676	991332	.	+	.	ID=gene886;Name=YPD4_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04440;old_locus_tag=YPD4_0766
NC_017154.1	Protein Homology	CDS	990676	991332	.	+	0	ID=cds875;Parent=gene886;Dbxref=Genbank:WP_002209957.1;Name=WP_002209957.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose-5-phosphate isomerase A 1;protein_id=WP_002209957.1;transl_table=11
NC_017154.1	RefSeq	gene	991639	992880	.	+	.	ID=gene887;Name=YPD4_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04445;old_locus_tag=YPD4_0767
NC_017154.1	Protein Homology	CDS	991639	992880	.	+	0	ID=cds876;Parent=gene887;Dbxref=Genbank:WP_002209956.1;Name=WP_002209956.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	992922	993094	.	+	.	ID=id82;gbkey=repeat_region
NC_017154.1	RefSeq	gene	993145	993741	.	-	.	ID=gene888;Name=YPD4_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04450;old_locus_tag=YPD4_0768
NC_017154.1	Protein Homology	CDS	993145	993741	.	-	0	ID=cds877;Parent=gene888;Dbxref=Genbank:WP_002209955.1;Name=WP_002209955.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_002209955.1;transl_table=11
NC_017154.1	RefSeq	gene	994105	994434	.	-	.	ID=gene889;Name=YPD4_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04455;old_locus_tag=YPD4_0769
NC_017154.1	Protein Homology	CDS	994105	994434	.	-	0	ID=cds878;Parent=gene889;Dbxref=Genbank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11
NC_017154.1	RefSeq	gene	994771	995349	.	+	.	ID=gene890;Name=YPD4_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04460;old_locus_tag=YPD4_0770
NC_017154.1	Protein Homology	CDS	994771	995349	.	+	0	ID=cds879;Parent=gene890;Dbxref=Genbank:WP_002209953.1;Name=WP_002209953.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209953.1;transl_table=11
NC_017154.1	RefSeq	gene	995437	996750	.	+	.	ID=gene891;Name=YPD4_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04465;old_locus_tag=YPD4_0771
NC_017154.1	Protein Homology	CDS	995437	996750	.	+	0	ID=cds880;Parent=gene891;Dbxref=Genbank:WP_002209952.1;Name=WP_002209952.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=proline aminopeptidase P II;protein_id=WP_002209952.1;transl_table=11
NC_017154.1	RefSeq	gene	996819	997997	.	+	.	ID=gene892;Name=YPD4_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04470;old_locus_tag=YPD4_0772
NC_017154.1	Protein Homology	CDS	996819	997997	.	+	0	ID=cds881;Parent=gene892;Dbxref=Genbank:WP_002209951.1;Name=WP_002209951.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209951.1;transl_table=11
NC_017154.1	RefSeq	gene	998170	999390	.	+	.	ID=gene893;Name=YPD4_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04475;old_locus_tag=YPD4_0773
NC_017154.1	Protein Homology	CDS	998170	999390	.	+	0	ID=cds882;Parent=gene893;Dbxref=Genbank:WP_002209950.1;Name=WP_002209950.1;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209950.1;transl_table=11
NC_017154.1	RefSeq	gene	1000111	1001208	.	+	.	ID=gene894;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=YPD4_RS04480;old_locus_tag=YPD4_0774
NC_017154.1	Protein Homology	CDS	1000111	1001208	.	+	0	ID=cds883;Parent=gene894;Dbxref=Genbank:WP_002209949.1;Name=WP_002209949.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=WP_002209949.1;transl_table=11
NC_017154.1	RefSeq	gene	1001277	1001663	.	+	.	ID=gene895;Name=YPD4_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04485;old_locus_tag=YPD4_0775
NC_017154.1	Protein Homology	CDS	1001277	1001663	.	+	0	ID=cds884;Parent=gene895;Dbxref=Genbank:WP_002209948.1;Name=WP_002209948.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_002209948.1;transl_table=11
NC_017154.1	RefSeq	gene	1001875	1004754	.	+	.	ID=gene896;Name=YPD4_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04490;old_locus_tag=YPD4_0776
NC_017154.1	Protein Homology	CDS	1001875	1004754	.	+	0	ID=cds885;Parent=gene896;Dbxref=Genbank:WP_002209947.1;Name=WP_002209947.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=WP_002209947.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1004788	1004961	.	+	.	ID=id83;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1005132	1005569	.	+	.	ID=gene897;Name=YPD4_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04495;old_locus_tag=YPD4_0777
NC_017154.1	Protein Homology	CDS	1005132	1005569	.	+	0	ID=cds886;Parent=gene897;Dbxref=Genbank:WP_002209946.1;Name=WP_002209946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209946.1;transl_table=11
NC_017154.1	RefSeq	gene	1006630	1006782	.	+	.	ID=gene898;Name=YPD4_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04500
NC_017154.1	Protein Homology	CDS	1006630	1006782	.	+	0	ID=cds887;Parent=gene898;Dbxref=Genbank:WP_002209944.1;Name=WP_002209944.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002209944.1;transl_table=11
NC_017154.1	RefSeq	gene	1006779	1008755	.	+	.	ID=gene899;Name=YPD4_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04505;old_locus_tag=YPD4_0778
NC_017154.1	Protein Homology	CDS	1006779	1008755	.	+	0	ID=cds888;Parent=gene899;Dbxref=Genbank:WP_002215142.1;Name=WP_002215142.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215142.1;transl_table=11
NC_017154.1	RefSeq	gene	1008859	1009962	.	+	.	ID=gene900;Name=YPD4_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04510;old_locus_tag=YPD4_0779
NC_017154.1	Protein Homology	CDS	1008859	1009962	.	+	0	ID=cds889;Parent=gene900;Dbxref=Genbank:WP_002209943.1;Name=WP_002209943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209943.1;transl_table=11
NC_017154.1	RefSeq	gene	1010164	1010865	.	+	.	ID=gene901;Name=YPD4_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04515;old_locus_tag=YPD4_0780
NC_017154.1	Protein Homology	CDS	1010164	1010865	.	+	0	ID=cds890;Parent=gene901;Dbxref=Genbank:WP_002209942.1;Name=WP_002209942.1;gbkey=CDS;product=hemolysin III;protein_id=WP_002209942.1;transl_table=11
NC_017154.1	RefSeq	gene	1011123	1011620	.	+	.	ID=gene902;Name=YPD4_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04520;old_locus_tag=YPD4_0781
NC_017154.1	Protein Homology	CDS	1011123	1011620	.	+	0	ID=cds891;Parent=gene902;Dbxref=Genbank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209941.1;transl_table=11
NC_017154.1	RefSeq	gene	1011693	1012685	.	-	.	ID=gene903;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=YPD4_RS04525;old_locus_tag=YPD4_0782
NC_017154.1	Protein Homology	CDS	1011693	1012685	.	-	0	ID=cds892;Parent=gene903;Dbxref=Genbank:WP_002209940.1;Name=WP_002209940.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=tRNA-modifying protein YgfZ;protein_id=WP_002209940.1;transl_table=11
NC_017154.1	RefSeq	gene	1013002	1013268	.	+	.	ID=gene904;Name=YPD4_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04530
NC_017154.1	Protein Homology	CDS	1013002	1013268	.	+	0	ID=cds893;Parent=gene904;Dbxref=Genbank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209939.1;transl_table=11
NC_017154.1	RefSeq	gene	1013249	1013674	.	+	.	ID=gene905;Name=YPD4_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04535;old_locus_tag=YPD4_0783
NC_017154.1	Protein Homology	CDS	1013249	1013674	.	+	0	ID=cds894;Parent=gene905;Dbxref=Genbank:WP_002215144.1;Name=WP_002215144.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215144.1;transl_table=11
NC_017154.1	RefSeq	gene	1013674	1014372	.	+	.	ID=gene906;Name=YPD4_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04540;old_locus_tag=YPD4_0784
NC_017154.1	Protein Homology	CDS	1013674	1014372	.	+	0	ID=cds895;Parent=gene906;Dbxref=Genbank:WP_002209937.1;Name=WP_002209937.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209937.1;transl_table=11
NC_017154.1	RefSeq	gene	1014397	1015815	.	+	.	ID=gene907;Name=YPD4_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04545;old_locus_tag=YPD4_0785
NC_017154.1	Protein Homology	CDS	1014397	1015815	.	+	0	ID=cds896;Parent=gene907;Dbxref=Genbank:WP_002209936.1;Name=WP_002209936.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002209936.1;transl_table=11
NC_017154.1	RefSeq	gene	1015936	1017393	.	+	.	ID=gene908;Name=YPD4_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04550;old_locus_tag=YPD4_0786
NC_017154.1	Protein Homology	CDS	1015936	1017393	.	+	0	ID=cds897;Parent=gene908;Dbxref=Genbank:WP_002220113.1;Name=WP_002220113.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220113.1;transl_table=11
NC_017154.1	RefSeq	gene	1017483	1018001	.	-	.	ID=gene909;Name=YPD4_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04555;old_locus_tag=YPD4_0787
NC_017154.1	Protein Homology	CDS	1017483	1018001	.	-	0	ID=cds898;Parent=gene909;Dbxref=Genbank:WP_002209934.1;Name=WP_002209934.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin;protein_id=WP_002209934.1;transl_table=11
NC_017154.1	RefSeq	gene	1018108	1019007	.	+	.	ID=gene910;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=YPD4_RS04560;old_locus_tag=YPD4_0788
NC_017154.1	Protein Homology	CDS	1018108	1019007	.	+	0	ID=cds899;Parent=gene910;Dbxref=Genbank:WP_002209933.1;Name=WP_002209933.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11
NC_017154.1	RefSeq	gene	1019038	1019754	.	+	.	ID=gene911;Name=YPD4_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04565;old_locus_tag=YPD4_0789
NC_017154.1	Protein Homology	CDS	1019038	1019754	.	+	0	ID=cds900;Parent=gene911;Dbxref=Genbank:WP_002209932.1;Name=WP_002209932.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=thiol:disulfide interchange protein DsbC;protein_id=WP_002209932.1;transl_table=11
NC_017154.1	RefSeq	gene	1019761	1021494	.	+	.	ID=gene912;Name=YPD4_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04570;old_locus_tag=YPD4_0790
NC_017154.1	Protein Homology	CDS	1019761	1021494	.	+	0	ID=cds901;Parent=gene912;Dbxref=Genbank:WP_002209931.1;Name=WP_002209931.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_002209931.1;transl_table=11
NC_017154.1	RefSeq	gene	1021839	1022771	.	+	.	ID=gene913;Name=YPD4_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04575;old_locus_tag=YPD4_0791
NC_017154.1	Protein Homology	CDS	1021839	1022771	.	+	0	ID=cds902;Parent=gene913;Dbxref=Genbank:WP_002231350.1;Name=WP_002231350.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_002231350.1;transl_table=11
NC_017154.1	RefSeq	gene	1022781	1024298	.	+	.	ID=gene914;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=YPD4_RS04580;old_locus_tag=YPD4_0792
NC_017154.1	Protein Homology	CDS	1022781	1024298	.	+	0	ID=cds903;Parent=gene914;Dbxref=Genbank:WP_002209930.1;Name=WP_002209930.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11
NC_017154.1	RefSeq	gene	1024492	1024565	.	+	.	ID=gene915;Name=YPD4_RS04585;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS04585;old_locus_tag=YPD4_t8
NC_017154.1	tRNAscan-SE	tRNA	1024492	1024565	.	+	.	ID=rna10;Parent=gene915;anticodon=(pos:1024524..1024526);gbkey=tRNA;product=tRNA-Gly
NC_017154.1	tRNAscan-SE	exon	1024492	1024565	.	+	.	ID=id84;Parent=rna10;anticodon=(pos:1024524..1024526);gbkey=tRNA;product=tRNA-Gly
NC_017154.1	RefSeq	gene	1024731	1025945	.	+	.	ID=gene916;Name=YPD4_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04590;old_locus_tag=YPD4_0793
NC_017154.1	Protein Homology	CDS	1024731	1025945	.	+	0	ID=cds904;Parent=gene916;Dbxref=Genbank:WP_002209929.1;Name=WP_002209929.1;gbkey=CDS;product=integrase;protein_id=WP_002209929.1;transl_table=11
NC_017154.1	RefSeq	gene	1026027	1026212	.	-	.	ID=gene917;Name=YPD4_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04595
NC_017154.1	Protein Homology	CDS	1026027	1026212	.	-	0	ID=cds905;Parent=gene917;Dbxref=Genbank:WP_002209928.1;Name=WP_002209928.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209928.1;transl_table=11
NC_017154.1	RefSeq	gene	1026313	1026438	.	-	.	ID=gene918;Name=YPD4_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04600
NC_017154.1	Protein Homology	CDS	1026313	1026438	.	-	0	ID=cds906;Parent=gene918;Dbxref=Genbank:WP_002214784.1;Name=WP_002214784.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214784.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1026596	1026851	.	+	.	ID=id85;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1026810	1027070	.	+	.	ID=gene919;Name=YPD4_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04605
NC_017154.1	Protein Homology	CDS	1026810	1027070	.	+	0	ID=cds907;Parent=gene919;Dbxref=Genbank:WP_002214785.1;Name=WP_002214785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214785.1;transl_table=11
NC_017154.1	RefSeq	gene	1027133	1027495	.	+	.	ID=gene920;Name=YPD4_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04610;old_locus_tag=YPD4_0794
NC_017154.1	Protein Homology	CDS	1027133	1027495	.	+	0	ID=cds908;Parent=gene920;Dbxref=Genbank:WP_002209925.1;Name=WP_002209925.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209925.1;transl_table=11
NC_017154.1	RefSeq	gene	1027659	1027955	.	+	.	ID=gene921;Name=YPD4_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04615
NC_017154.1	Protein Homology	CDS	1027659	1027955	.	+	0	ID=cds909;Parent=gene921;Dbxref=Genbank:WP_002214787.1;Name=WP_002214787.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214787.1;transl_table=11
NC_017154.1	RefSeq	gene	1027955	1028353	.	+	.	ID=gene922;Name=YPD4_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04620;old_locus_tag=YPD4_0795
NC_017154.1	Protein Homology	CDS	1027955	1028353	.	+	0	ID=cds910;Parent=gene922;Dbxref=Genbank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;product=antitoxin;protein_id=WP_002209924.1;transl_table=11
NC_017154.1	RefSeq	gene	1028753	1031044	.	-	.	ID=gene923;Name=YPD4_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04625;old_locus_tag=YPD4_0796
NC_017154.1	Protein Homology	CDS	1028753	1031044	.	-	0	ID=cds911;Parent=gene923;Dbxref=Genbank:WP_002209923.1;Name=WP_002209923.1;gbkey=CDS;product=DNA primase;protein_id=WP_002209923.1;transl_table=11
NC_017154.1	RefSeq	gene	1031344	1031670	.	+	.	ID=gene924;Name=YPD4_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04630;old_locus_tag=YPD4_0797
NC_017154.1	Protein Homology	CDS	1031344	1031670	.	+	0	ID=cds912;Parent=gene924;Dbxref=Genbank:WP_002209922.1;Name=WP_002209922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209922.1;transl_table=11
NC_017154.1	RefSeq	gene	1031663	1031815	.	+	.	ID=gene925;Name=YPD4_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04635
NC_017154.1	Protein Homology	CDS	1031663	1031815	.	+	0	ID=cds913;Parent=gene925;Dbxref=Genbank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11
NC_017154.1	RefSeq	gene	1031829	1032029	.	-	.	ID=gene926;Name=YPD4_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04640
NC_017154.1	Protein Homology	CDS	1031829	1032029	.	-	0	ID=cds914;Parent=gene926;Dbxref=Genbank:WP_002209920.1;Name=WP_002209920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209920.1;transl_table=11
NC_017154.1	RefSeq	gene	1032211	1032543	.	-	.	ID=gene927;Name=YPD4_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04645;old_locus_tag=YPD4_0798
NC_017154.1	Protein Homology	CDS	1032211	1032543	.	-	0	ID=cds915;Parent=gene927;Dbxref=Genbank:WP_002214791.1;Name=WP_002214791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214791.1;transl_table=11
NC_017154.1	RefSeq	gene	1032549	1032785	.	-	.	ID=gene928;Name=YPD4_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04650
NC_017154.1	Protein Homology	CDS	1032549	1032785	.	-	0	ID=cds916;Parent=gene928;Dbxref=Genbank:WP_002214792.1;Name=WP_002214792.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214792.1;transl_table=11
NC_017154.1	RefSeq	gene	1032798	1033163	.	-	.	ID=gene929;Name=YPD4_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04655;old_locus_tag=YPD4_0799
NC_017154.1	Protein Homology	CDS	1032798	1033163	.	-	0	ID=cds917;Parent=gene929;Dbxref=Genbank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11
NC_017154.1	RefSeq	gene	1033432	1034574	.	+	.	ID=gene930;Name=YPD4_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04660;old_locus_tag=YPD4_0800
NC_017154.1	Protein Homology	CDS	1033432	1034574	.	+	0	ID=cds918;Parent=gene930;Dbxref=Genbank:WP_002209918.1;Name=WP_002209918.1;gbkey=CDS;product=Fic family protein;protein_id=WP_002209918.1;transl_table=11
NC_017154.1	RefSeq	gene	1035081	1036619	.	+	.	ID=gene931;Name=YPD4_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04665;old_locus_tag=YPD4_0801
NC_017154.1	Protein Homology	CDS	1035081	1036619	.	+	0	ID=cds919;Parent=gene931;Dbxref=Genbank:WP_002214794.1;Name=WP_002214794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214794.1;transl_table=11
NC_017154.1	RefSeq	gene	1036616	1036810	.	+	.	ID=gene932;Name=YPD4_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04670
NC_017154.1	Protein Homology	CDS	1036616	1036810	.	+	0	ID=cds920;Parent=gene932;Dbxref=Genbank:WP_002214795.1;Name=WP_002214795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214795.1;transl_table=11
NC_017154.1	RefSeq	gene	1037183	1037386	.	+	.	ID=gene933;Name=YPD4_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04675
NC_017154.1	Protein Homology	CDS	1037183	1037386	.	+	0	ID=cds921;Parent=gene933;Dbxref=Genbank:WP_002209915.1;Name=WP_002209915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209915.1;transl_table=11
NC_017154.1	RefSeq	gene	1037433	1037717	.	+	.	ID=gene934;Name=YPD4_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04680
NC_017154.1	Protein Homology	CDS	1037433	1037717	.	+	0	ID=cds922;Parent=gene934;Dbxref=Genbank:WP_002214798.1;Name=WP_002214798.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_002214798.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1037527	1037890	.	+	.	ID=id86;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1038127	1040286	.	+	.	ID=gene935;Name=YPD4_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04685;old_locus_tag=YPD4_0802
NC_017154.1	Protein Homology	CDS	1038127	1040286	.	+	0	ID=cds923;Parent=gene935;Dbxref=Genbank:WP_002209914.1;Name=WP_002209914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209914.1;transl_table=11
NC_017154.1	RefSeq	gene	1040256	1041023	.	+	.	ID=gene936;Name=YPD4_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04690;old_locus_tag=YPD4_0803
NC_017154.1	Protein Homology	CDS	1040256	1041023	.	+	0	ID=cds924;Parent=gene936;Dbxref=Genbank:WP_002209913.1;Name=WP_002209913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209913.1;transl_table=11
NC_017154.1	RefSeq	gene	1041335	1041547	.	+	.	ID=gene937;Name=YPD4_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04695
NC_017154.1	Protein Homology	CDS	1041335	1041547	.	+	0	ID=cds925;Parent=gene937;Dbxref=Genbank:WP_002214799.1;Name=WP_002214799.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214799.1;transl_table=11
NC_017154.1	RefSeq	gene	1041628	1042407	.	+	.	ID=gene938;Name=YPD4_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04700;old_locus_tag=YPD4_0804
NC_017154.1	Protein Homology	CDS	1041628	1042407	.	+	0	ID=cds926;Parent=gene938;Dbxref=Genbank:WP_002209912.1;Name=WP_002209912.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209912.1;transl_table=11
NC_017154.1	RefSeq	gene	1042663	1042929	.	+	.	ID=gene939;Name=YPD4_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04705;old_locus_tag=YPD4_0805
NC_017154.1	Protein Homology	CDS	1042663	1042929	.	+	0	ID=cds927;Parent=gene939;Dbxref=Genbank:WP_002209911.1;Name=WP_002209911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209911.1;transl_table=11
NC_017154.1	RefSeq	gene	1043012	1043332	.	-	.	ID=gene940;Name=YPD4_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04710;old_locus_tag=YPD4_0806
NC_017154.1	Protein Homology	CDS	1043012	1043332	.	-	0	ID=cds928;Parent=gene940;Dbxref=Genbank:WP_002209910.1;Name=WP_002209910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209910.1;transl_table=11
NC_017154.1	RefSeq	gene	1043332	1044012	.	-	.	ID=gene941;Name=YPD4_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04715;old_locus_tag=YPD4_0807
NC_017154.1	Protein Homology	CDS	1043332	1044012	.	-	0	ID=cds929;Parent=gene941;Dbxref=Genbank:WP_002209909.1;Name=WP_002209909.1;gbkey=CDS;product=PadR family transcriptional regulator;protein_id=WP_002209909.1;transl_table=11
NC_017154.1	RefSeq	gene	1044436	1045293	.	-	.	ID=gene942;Name=YPD4_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04720;old_locus_tag=YPD4_0808
NC_017154.1	Protein Homology	CDS	1044436	1045293	.	-	0	ID=cds930;Parent=gene942;Dbxref=Genbank:WP_002209908.1;Name=WP_002209908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209908.1;transl_table=11
NC_017154.1	RefSeq	gene	1045669	1046187	.	-	.	ID=gene943;Name=YPD4_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04725;old_locus_tag=YPD4_0809
NC_017154.1	Protein Homology	CDS	1045669	1046187	.	-	0	ID=cds931;Parent=gene943;Dbxref=Genbank:WP_002209907.1;Name=WP_002209907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209907.1;transl_table=11
NC_017154.1	RefSeq	gene	1046965	1047966	.	-	.	ID=gene944;Name=YPD4_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04730;old_locus_tag=YPD4_0810
NC_017154.1	Protein Homology	CDS	1046965	1047966	.	-	0	ID=cds932;Parent=gene944;Dbxref=Genbank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209906.1;transl_table=11
NC_017154.1	RefSeq	gene	1048401	1049405	.	-	.	ID=gene945;Name=YPD4_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04735;old_locus_tag=YPD4_0811
NC_017154.1	Protein Homology	CDS	1048401	1049405	.	-	0	ID=cds933;Parent=gene945;Dbxref=Genbank:WP_002209904.1;Name=WP_002209904.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209904.1;transl_table=11
NC_017154.1	RefSeq	gene	1049477	1050985	.	-	.	ID=gene946;Name=YPD4_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04740;old_locus_tag=YPD4_0812
NC_017154.1	Protein Homology	CDS	1049477	1050985	.	-	0	ID=cds934;Parent=gene946;Dbxref=Genbank:WP_002209903.1;Name=WP_002209903.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=enolase;protein_id=WP_002209903.1;transl_table=11
NC_017154.1	RefSeq	gene	1051534	1052634	.	-	.	ID=gene947;Name=YPD4_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04745;old_locus_tag=YPD4_0813
NC_017154.1	Protein Homology	CDS	1051534	1052634	.	-	0	ID=cds935;Parent=gene947;Dbxref=Genbank:WP_002209902.1;Name=WP_002209902.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209902.1;transl_table=11
NC_017154.1	RefSeq	gene	1052996	1054231	.	+	.	ID=gene948;Name=YPD4_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04750;old_locus_tag=YPD4_0814
NC_017154.1	Protein Homology	CDS	1052996	1054231	.	+	0	ID=cds936;Parent=gene948;Dbxref=Genbank:WP_002209901.1;Name=WP_002209901.1;gbkey=CDS;product=cyclodextrin-binding protein;protein_id=WP_002209901.1;transl_table=11
NC_017154.1	RefSeq	gene	1054391	1055698	.	+	.	ID=gene949;Name=YPD4_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04755;old_locus_tag=YPD4_0815
NC_017154.1	Protein Homology	CDS	1054391	1055698	.	+	0	ID=cds937;Parent=gene949;Dbxref=Genbank:WP_002209900.1;Name=WP_002209900.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209900.1;transl_table=11
NC_017154.1	RefSeq	gene	1055710	1056562	.	+	.	ID=gene950;Name=YPD4_RS04760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS04760;pseudo=true
NC_017154.1	Protein Homology	CDS	1055710	1056562	.	+	0	ID=cds938;Parent=gene950;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter permease;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1056567	1057769	.	+	.	ID=gene951;Name=YPD4_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04765;old_locus_tag=YPD4_0817
NC_017154.1	Protein Homology	CDS	1056567	1057769	.	+	0	ID=cds939;Parent=gene951;Dbxref=Genbank:WP_002209898.1;Name=WP_002209898.1;gbkey=CDS;product=galactosidase;protein_id=WP_002209898.1;transl_table=11
NC_017154.1	RefSeq	gene	1057820	1059880	.	+	.	ID=gene952;Name=YPD4_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04770;old_locus_tag=YPD4_0818
NC_017154.1	Protein Homology	CDS	1057820	1059880	.	+	0	ID=cds940;Parent=gene952;Dbxref=Genbank:WP_002209897.1;Name=WP_002209897.1;gbkey=CDS;product=beta-galactosidase;protein_id=WP_002209897.1;transl_table=11
NC_017154.1	RefSeq	gene	1059992	1060303	.	+	.	ID=gene953;Name=YPD4_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04775;old_locus_tag=YPD4_0819
NC_017154.1	Protein Homology	CDS	1059992	1060303	.	+	0	ID=cds941;Parent=gene953;Dbxref=Genbank:WP_002209896.1;Name=WP_002209896.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002209896.1;transl_table=11
NC_017154.1	RefSeq	gene	1060676	1061935	.	-	.	ID=gene954;Name=YPD4_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04780;old_locus_tag=YPD4_0820
NC_017154.1	Protein Homology	CDS	1060676	1061935	.	-	0	ID=cds942;Parent=gene954;Dbxref=Genbank:WP_002215759.1;Name=WP_002215759.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;product=maltoporin;protein_id=WP_002215759.1;transl_table=11
NC_017154.1	RefSeq	gene	1062207	1063280	.	+	.	ID=gene955;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=YPD4_RS04785;old_locus_tag=YPD4_0821
NC_017154.1	Protein Homology	CDS	1062207	1063280	.	+	0	ID=cds943;Parent=gene955;Dbxref=Genbank:WP_002209894.1;Name=WP_002209894.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_002209894.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1063411	1063582	.	+	.	ID=id87;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1063625	1066000	.	-	.	ID=gene956;Name=YPD4_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04790;old_locus_tag=YPD4_0822
NC_017154.1	Protein Homology	CDS	1063625	1066000	.	-	0	ID=cds944;Parent=gene956;Dbxref=Genbank:WP_002209892.1;Name=WP_002209892.1;gbkey=CDS;product=alpha-glucosidase;protein_id=WP_002209892.1;transl_table=11
NC_017154.1	RefSeq	gene	1066151	1067458	.	-	.	ID=gene957;Name=YPD4_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04795;old_locus_tag=YPD4_0823
NC_017154.1	Protein Homology	CDS	1066151	1067458	.	-	0	ID=cds945;Parent=gene957;Dbxref=Genbank:WP_002209891.1;Name=WP_002209891.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=sugar transporter;protein_id=WP_002209891.1;transl_table=11
NC_017154.1	RefSeq	gene	1067852	1068934	.	+	.	ID=gene958;Name=YPD4_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04800;old_locus_tag=YPD4_0824
NC_017154.1	Protein Homology	CDS	1067852	1068934	.	+	0	ID=cds946;Parent=gene958;Dbxref=Genbank:WP_002209890.1;Name=WP_002209890.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209890.1;transl_table=11
NC_017154.1	RefSeq	gene	1068924	1069205	.	+	.	ID=gene959;Name=YPD4_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04805
NC_017154.1	Protein Homology	CDS	1068924	1069205	.	+	0	ID=cds947;Parent=gene959;Dbxref=Genbank:WP_002215765.1;Name=WP_002215765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215765.1;transl_table=11
NC_017154.1	RefSeq	gene	1069175	1069753	.	-	.	ID=gene960;Name=YPD4_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04810;old_locus_tag=YPD4_0825
NC_017154.1	Protein Homology	CDS	1069175	1069753	.	-	0	ID=cds948;Parent=gene960;Dbxref=Genbank:WP_002209889.1;Name=WP_002209889.1;gbkey=CDS;product=thiamine biogenesis protein ThiJ;protein_id=WP_002209889.1;transl_table=11
NC_017154.1	RefSeq	gene	1069777	1070631	.	-	.	ID=gene961;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=YPD4_RS04815;old_locus_tag=YPD4_0826
NC_017154.1	Protein Homology	CDS	1069777	1070631	.	-	0	ID=cds949;Parent=gene961;Dbxref=Genbank:WP_002209888.1;Name=WP_002209888.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=gatY;product=fructose-bisphosphate aldolase;protein_id=WP_002209888.1;transl_table=11
NC_017154.1	RefSeq	gene	1070740	1072227	.	-	.	ID=gene962;Name=YPD4_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04820;old_locus_tag=YPD4_0827
NC_017154.1	Protein Homology	CDS	1070740	1072227	.	-	0	ID=cds950;Parent=gene962;Dbxref=Genbank:WP_002209887.1;Name=WP_002209887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209887.1;transl_table=11
NC_017154.1	RefSeq	gene	1072350	1073957	.	-	.	ID=gene963;Name=YPD4_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04825;old_locus_tag=YPD4_0828
NC_017154.1	Protein Homology	CDS	1072350	1073957	.	-	0	ID=cds951;Parent=gene963;Dbxref=Genbank:WP_002209886.1;Name=WP_002209886.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209886.1;transl_table=11
NC_017154.1	RefSeq	gene	1073978	1075204	.	-	.	ID=gene964;Name=YPD4_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04830;old_locus_tag=YPD4_0829
NC_017154.1	Protein Homology	CDS	1073978	1075204	.	-	0	ID=cds952;Parent=gene964;Dbxref=Genbank:WP_002209885.1;Name=WP_002209885.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002209885.1;transl_table=11
NC_017154.1	RefSeq	gene	1075448	1076506	.	-	.	ID=gene965;Name=YPD4_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04835;old_locus_tag=YPD4_0830
NC_017154.1	Protein Homology	CDS	1075448	1076506	.	-	0	ID=cds953;Parent=gene965;Dbxref=Genbank:WP_002209884.1;Name=WP_002209884.1;gbkey=CDS;product=glycosyl hydrolase family 88;protein_id=WP_002209884.1;transl_table=11
NC_017154.1	RefSeq	gene	1076522	1077277	.	-	.	ID=gene966;Name=YPD4_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04840;old_locus_tag=YPD4_0831
NC_017154.1	Protein Homology	CDS	1076522	1077277	.	-	0	ID=cds954;Parent=gene966;Dbxref=Genbank:WP_002209883.1;Name=WP_002209883.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002209883.1;transl_table=11
NC_017154.1	RefSeq	gene	1077473	1078639	.	-	.	ID=gene967;Name=YPD4_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04845;old_locus_tag=YPD4_0832
NC_017154.1	Protein Homology	CDS	1077473	1078639	.	-	0	ID=cds955;Parent=gene967;Dbxref=Genbank:WP_002209882.1;Name=WP_002209882.1;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002209882.1;transl_table=11
NC_017154.1	RefSeq	gene	1078642	1079082	.	-	.	ID=gene968;Name=YPD4_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04850;old_locus_tag=YPD4_0833
NC_017154.1	Protein Homology	CDS	1078642	1079082	.	-	0	ID=cds956;Parent=gene968;Dbxref=Genbank:WP_002209881.1;Name=WP_002209881.1;gbkey=CDS;product=PTS mannose transporter subunit IIA;protein_id=WP_002209881.1;transl_table=11
NC_017154.1	RefSeq	gene	1079168	1080037	.	-	.	ID=gene969;Name=YPD4_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04855;old_locus_tag=YPD4_0834
NC_017154.1	Protein Homology	CDS	1079168	1080037	.	-	0	ID=cds957;Parent=gene969;Dbxref=Genbank:WP_044023332.1;Name=WP_044023332.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_044023332.1;transl_table=11
NC_017154.1	RefSeq	gene	1080049	1080837	.	-	.	ID=gene970;Name=YPD4_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04860;old_locus_tag=YPD4_0835
NC_017154.1	Protein Homology	CDS	1080049	1080837	.	-	0	ID=cds958;Parent=gene970;Dbxref=Genbank:WP_002209879.1;Name=WP_002209879.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11
NC_017154.1	RefSeq	gene	1080884	1081381	.	-	.	ID=gene971;Name=YPD4_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04865;old_locus_tag=YPD4_0836
NC_017154.1	Protein Homology	CDS	1080884	1081381	.	-	0	ID=cds959;Parent=gene971;Dbxref=Genbank:WP_015683876.1;Name=WP_015683876.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_015683876.1;transl_table=11
NC_017154.1	RefSeq	gene	1081399	1082565	.	-	.	ID=gene972;Name=YPD4_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04870;old_locus_tag=YPD4_0837
NC_017154.1	Protein Homology	CDS	1081399	1082565	.	-	0	ID=cds960;Parent=gene972;Dbxref=Genbank:WP_002209877.1;Name=WP_002209877.1;gbkey=CDS;product=aldose isomerase;protein_id=WP_002209877.1;transl_table=11
NC_017154.1	RefSeq	gene	1082562	1083860	.	-	.	ID=gene973;Name=YPD4_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04875;old_locus_tag=YPD4_0838
NC_017154.1	Protein Homology	CDS	1082562	1083860	.	-	0	ID=cds961;Parent=gene973;Dbxref=Genbank:WP_002209876.1;Name=WP_002209876.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;product=tagatose 6-phosphate kinase;protein_id=WP_002209876.1;transl_table=11
NC_017154.1	RefSeq	gene	1083910	1084686	.	-	.	ID=gene974;Name=YPD4_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04880;old_locus_tag=YPD4_0839
NC_017154.1	Protein Homology	CDS	1083910	1084686	.	-	0	ID=cds962;Parent=gene974;Dbxref=Genbank:WP_002209875.1;Name=WP_002209875.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209875.1;transl_table=11
NC_017154.1	RefSeq	gene	1085526	1087079	.	+	.	ID=gene975;Name=YPD4_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04885;old_locus_tag=YPD4_0840
NC_017154.1	Protein Homology	CDS	1085526	1087079	.	+	0	ID=cds963;Parent=gene975;Dbxref=Genbank:WP_002209873.1;Name=WP_002209873.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209873.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1087259	1090097	.	+	.	ID=id88;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1087531	1087965	.	-	.	ID=gene976;Name=YPD4_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04890;old_locus_tag=YPD4_0841
NC_017154.1	Protein Homology	CDS	1087531	1087965	.	-	0	ID=cds964;Parent=gene976;Dbxref=Genbank:WP_002209872.1;Name=WP_002209872.1;gbkey=CDS;product=transposase;protein_id=WP_002209872.1;transl_table=11
NC_017154.1	RefSeq	gene	1088022	1089044	.	+	.	ID=gene977;Name=YPD4_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04895;old_locus_tag=YPD4_0842
NC_017154.1	Protein Homology	CDS	1088022	1089044	.	+	0	ID=cds965;Parent=gene977;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	1089044	1089823	.	+	.	ID=gene978;Name=YPD4_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04900;old_locus_tag=YPD4_0843
NC_017154.1	Protein Homology	CDS	1089044	1089823	.	+	0	ID=cds966;Parent=gene978;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	1090168	1093281	.	-	.	ID=gene979;Name=YPD4_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04905;old_locus_tag=YPD4_0844
NC_017154.1	Protein Homology	CDS	1090168	1093281	.	-	0	ID=cds967;Parent=gene979;Dbxref=Genbank:WP_002214081.1;Name=WP_002214081.1;gbkey=CDS;product=chondroitin ABC lyase;protein_id=WP_002214081.1;transl_table=11
NC_017154.1	RefSeq	gene	1093351	1095537	.	-	.	ID=gene980;Name=YPD4_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04910;old_locus_tag=YPD4_0845
NC_017154.1	Protein Homology	CDS	1093351	1095537	.	-	0	ID=cds968;Parent=gene980;Dbxref=Genbank:WP_002209869.1;Name=WP_002209869.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209869.1;transl_table=11
NC_017154.1	RefSeq	gene	1095652	1096602	.	-	.	ID=gene981;Name=YPD4_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04915;old_locus_tag=YPD4_0846
NC_017154.1	Protein Homology	CDS	1095652	1096602	.	-	0	ID=cds969;Parent=gene981;Dbxref=Genbank:WP_002209868.1;Name=WP_002209868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209868.1;transl_table=11
NC_017154.1	RefSeq	gene	1096624	1096818	.	-	.	ID=gene982;Name=YPD4_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04920
NC_017154.1	Protein Homology	CDS	1096624	1096818	.	-	0	ID=cds970;Parent=gene982;Dbxref=Genbank:WP_002214083.1;Name=WP_002214083.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214083.1;transl_table=11
NC_017154.1	RefSeq	gene	1097205	1097393	.	-	.	ID=gene983;Name=YPD4_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04925
NC_017154.1	Protein Homology	CDS	1097205	1097393	.	-	0	ID=cds971;Parent=gene983;Dbxref=Genbank:WP_002214085.1;Name=WP_002214085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214085.1;transl_table=11
NC_017154.1	RefSeq	gene	1097889	1098644	.	+	.	ID=gene984;Name=YPD4_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04930;old_locus_tag=YPD4_0847
NC_017154.1	Protein Homology	CDS	1097889	1098644	.	+	0	ID=cds972;Parent=gene984;Dbxref=Genbank:WP_002220090.1;Name=WP_002220090.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11
NC_017154.1	RefSeq	gene	1099387	1099803	.	+	.	ID=gene985;Name=YPD4_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04935;old_locus_tag=YPD4_0848
NC_017154.1	Protein Homology	CDS	1099387	1099803	.	+	0	ID=cds973;Parent=gene985;Dbxref=Genbank:WP_002209866.1;Name=WP_002209866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209866.1;transl_table=11
NC_017154.1	RefSeq	gene	1099973	1100374	.	+	.	ID=gene986;Name=YPD4_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04940;old_locus_tag=YPD4_0849
NC_017154.1	Protein Homology	CDS	1099973	1100374	.	+	0	ID=cds974;Parent=gene986;Dbxref=Genbank:WP_002209865.1;Name=WP_002209865.1;gbkey=CDS;product=general secretion pathway protein GspC;protein_id=WP_002209865.1;transl_table=11
NC_017154.1	RefSeq	gene	1100455	1102377	.	+	.	ID=gene987;Name=YPD4_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04945;old_locus_tag=YPD4_0850
NC_017154.1	Protein Homology	CDS	1100455	1102377	.	+	0	ID=cds975;Parent=gene987;Dbxref=Genbank:WP_002220086.1;Name=WP_002220086.1;gbkey=CDS;product=type II secretion system protein GspD;protein_id=WP_002220086.1;transl_table=11
NC_017154.1	RefSeq	gene	1102374	1103885	.	+	.	ID=gene988;Name=YPD4_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04950;old_locus_tag=YPD4_0851
NC_017154.1	Protein Homology	CDS	1102374	1103885	.	+	0	ID=cds976;Parent=gene988;Dbxref=Genbank:WP_002209863.1;Name=WP_002209863.1;gbkey=CDS;product=type II secretion system protein GspE;protein_id=WP_002209863.1;transl_table=11
NC_017154.1	RefSeq	gene	1103872	1104066	.	+	.	ID=gene989;Name=YPD4_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04955
NC_017154.1	Protein Homology	CDS	1103872	1104066	.	+	0	ID=cds977;Parent=gene989;Dbxref=Genbank:WP_002214090.1;Name=WP_002214090.1;gbkey=CDS;product=general secretion pathway protein GspF;protein_id=WP_002214090.1;transl_table=11
NC_017154.1	RefSeq	gene	1104027	1105073	.	+	.	ID=gene990;Name=YPD4_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04960;old_locus_tag=YPD4_0852
NC_017154.1	Protein Homology	CDS	1104027	1105073	.	+	0	ID=cds978;Parent=gene990;Dbxref=Genbank:WP_002229014.1;Name=WP_002229014.1;gbkey=CDS;product=type II secretion system protein F;protein_id=WP_002229014.1;transl_table=11
NC_017154.1	RefSeq	gene	1105093	1105530	.	+	.	ID=gene991;Name=YPD4_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04965;old_locus_tag=YPD4_0853
NC_017154.1	Protein Homology	CDS	1105093	1105530	.	+	0	ID=cds979;Parent=gene991;Dbxref=Genbank:WP_002209862.1;Name=WP_002209862.1;gbkey=CDS;product=type II secretion system protein GspG;protein_id=WP_002209862.1;transl_table=11
NC_017154.1	RefSeq	gene	1105535	1106078	.	+	.	ID=gene992;Name=YPD4_RS04970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS04970;pseudo=true
NC_017154.1	Protein Homology	CDS	1105535	1106078	.	+	0	ID=cds980;Parent=gene992;exception=annotated by transcript or proteomic data;gbkey=CDS;product=general secretion pathway protein GspH;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1106170	1106460	.	+	.	ID=gene993;Name=YPD4_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04975
NC_017154.1	Protein Homology	CDS	1106170	1106460	.	+	0	ID=cds981;Parent=gene993;Dbxref=Genbank:WP_002214093.1;Name=WP_002214093.1;gbkey=CDS;product=general secretion pathway protein GspI;protein_id=WP_002214093.1;transl_table=11
NC_017154.1	RefSeq	gene	1106453	1107049	.	+	.	ID=gene994;Name=YPD4_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04980
NC_017154.1	Protein Homology	CDS	1106453	1107049	.	+	0	ID=cds982;Parent=gene994;Dbxref=Genbank:WP_002209860.1;Name=WP_002209860.1;gbkey=CDS;product=type II secretion system protein GspJ;protein_id=WP_002209860.1;transl_table=11
NC_017154.1	RefSeq	gene	1107118	1108014	.	+	.	ID=gene995;Name=YPD4_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04985;old_locus_tag=YPD4_0855
NC_017154.1	Protein Homology	CDS	1107118	1108014	.	+	0	ID=cds983;Parent=gene995;Dbxref=Genbank:WP_002209859.1;Name=WP_002209859.1;gbkey=CDS;product=general secretion pathway protein GspK;protein_id=WP_002209859.1;transl_table=11
NC_017154.1	RefSeq	gene	1107998	1109188	.	+	.	ID=gene996;Name=YPD4_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04990;old_locus_tag=YPD4_0856
NC_017154.1	Protein Homology	CDS	1107998	1109188	.	+	0	ID=cds984;Parent=gene996;Dbxref=Genbank:WP_002209858.1;Name=WP_002209858.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_002209858.1;transl_table=11
NC_017154.1	RefSeq	gene	1109197	1109646	.	+	.	ID=gene997;Name=YPD4_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS04995;old_locus_tag=YPD4_0857
NC_017154.1	Protein Homology	CDS	1109197	1109646	.	+	0	ID=cds985;Parent=gene997;Dbxref=Genbank:WP_002226092.1;Name=WP_002226092.1;gbkey=CDS;product=membrane protein;protein_id=WP_002226092.1;transl_table=11
NC_017154.1	RefSeq	gene	1109675	1110514	.	+	.	ID=gene998;Name=YPD4_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05000;old_locus_tag=YPD4_0858
NC_017154.1	Protein Homology	CDS	1109675	1110514	.	+	0	ID=cds986;Parent=gene998;Dbxref=Genbank:WP_002209856.1;Name=WP_002209856.1;gbkey=CDS;product=prepilin peptidase;protein_id=WP_002209856.1;transl_table=11
NC_017154.1	RefSeq	gene	1110566	1110871	.	-	.	ID=gene999;Name=YPD4_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05005;old_locus_tag=YPD4_0859
NC_017154.1	Protein Homology	CDS	1110566	1110871	.	-	0	ID=cds987;Parent=gene999;Dbxref=Genbank:WP_002214097.1;Name=WP_002214097.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002214097.1;transl_table=11
NC_017154.1	RefSeq	gene	1111155	1111871	.	+	.	ID=gene1000;Name=YPD4_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05010;old_locus_tag=YPD4_0860
NC_017154.1	Protein Homology	CDS	1111155	1111871	.	+	0	ID=cds988;Parent=gene1000;Dbxref=Genbank:WP_002214099.1;Name=WP_002214099.1;gbkey=CDS;product=regulatory membrane protein;protein_id=WP_002214099.1;transl_table=11
NC_017154.1	RefSeq	gene	1111868	1112269	.	+	.	ID=gene1001;Name=YPD4_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05015
NC_017154.1	Protein Homology	CDS	1111868	1112269	.	+	0	ID=cds989;Parent=gene1001;Dbxref=Genbank:WP_002214100.1;Name=WP_002214100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214100.1;transl_table=11
NC_017154.1	RefSeq	gene	1112424	1114115	.	+	.	ID=gene1002;Name=YPD4_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05020;old_locus_tag=YPD4_0861
NC_017154.1	Protein Homology	CDS	1112424	1114115	.	+	0	ID=cds990;Parent=gene1002;Dbxref=Genbank:WP_002209853.1;Name=WP_002209853.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002209853.1;transl_table=11
NC_017154.1	RefSeq	gene	1114101	1114736	.	-	.	ID=gene1003;Name=YPD4_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05025;old_locus_tag=YPD4_0862
NC_017154.1	Protein Homology	CDS	1114101	1114736	.	-	0	ID=cds991;Parent=gene1003;Dbxref=Genbank:WP_002209852.1;Name=WP_002209852.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002209852.1;transl_table=11
NC_017154.1	RefSeq	gene	1114849	1115736	.	-	.	ID=gene1004;Name=YPD4_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05030;old_locus_tag=YPD4_0863
NC_017154.1	Protein Homology	CDS	1114849	1115736	.	-	0	ID=cds992;Parent=gene1004;Dbxref=Genbank:WP_002209850.1;Name=WP_002209850.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002209850.1;transl_table=11
NC_017154.1	RefSeq	gene	1115843	1116751	.	+	.	ID=gene1005;Name=YPD4_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05035;old_locus_tag=YPD4_0864
NC_017154.1	Protein Homology	CDS	1115843	1116751	.	+	0	ID=cds993;Parent=gene1005;Dbxref=Genbank:WP_002209849.1;Name=WP_002209849.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209849.1;transl_table=11
NC_017154.1	RefSeq	gene	1117120	1118280	.	+	.	ID=gene1006;Name=YPD4_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05040;old_locus_tag=YPD4_0865
NC_017154.1	Protein Homology	CDS	1117120	1118280	.	+	0	ID=cds994;Parent=gene1006;Dbxref=Genbank:WP_002209848.1;Name=WP_002209848.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209848.1;transl_table=11
NC_017154.1	RefSeq	gene	1118277	1119218	.	-	.	ID=gene1007;Name=YPD4_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05045;old_locus_tag=YPD4_0866
NC_017154.1	Protein Homology	CDS	1118277	1119218	.	-	0	ID=cds995;Parent=gene1007;Dbxref=Genbank:WP_002209847.1;Name=WP_002209847.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209847.1;transl_table=11
NC_017154.1	RefSeq	gene	1119433	1120695	.	+	.	ID=gene1008;Name=YPD4_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05050;old_locus_tag=YPD4_0867
NC_017154.1	Protein Homology	CDS	1119433	1120695	.	+	0	ID=cds996;Parent=gene1008;Dbxref=Genbank:WP_002209846.1;Name=WP_002209846.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_002209846.1;transl_table=11
NC_017154.1	RefSeq	gene	1120692	1121714	.	-	.	ID=gene1009;Name=YPD4_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05055;old_locus_tag=YPD4_0868
NC_017154.1	Protein Homology	CDS	1120692	1121714	.	-	0	ID=cds997;Parent=gene1009;Dbxref=Genbank:WP_002209845.1;Name=WP_002209845.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209845.1;transl_table=11
NC_017154.1	RefSeq	gene	1122024	1124285	.	+	.	ID=gene1010;Name=YPD4_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05060;old_locus_tag=YPD4_0869
NC_017154.1	Protein Homology	CDS	1122024	1124285	.	+	0	ID=cds998;Parent=gene1010;Dbxref=Genbank:WP_002209844.1;Name=WP_002209844.1;gbkey=CDS;product=biotin transporter BioY;protein_id=WP_002209844.1;transl_table=11
NC_017154.1	RefSeq	gene	1124734	1126890	.	+	.	ID=gene1011;Name=YPD4_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05065;old_locus_tag=YPD4_0870
NC_017154.1	Protein Homology	CDS	1124734	1126890	.	+	0	ID=cds999;Parent=gene1011;Dbxref=Genbank:WP_002209843.1;Name=WP_002209843.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;product=bifunctional protein Aas;protein_id=WP_002209843.1;transl_table=11
NC_017154.1	RefSeq	gene	1126887	1128107	.	+	.	ID=gene1012;Name=YPD4_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05070;old_locus_tag=YPD4_0871
NC_017154.1	Protein Homology	CDS	1126887	1128107	.	+	0	ID=cds1000;Parent=gene1012;Dbxref=Genbank:WP_002209842.1;Name=WP_002209842.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11
NC_017154.1	RefSeq	gene	1128136	1128369	.	-	.	ID=gene1013;Name=YPD4_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05075
NC_017154.1	Protein Homology	CDS	1128136	1128369	.	-	0	ID=cds1001;Parent=gene1013;Dbxref=Genbank:WP_002228641.1;Name=WP_002228641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228641.1;transl_table=11
NC_017154.1	RefSeq	gene	1128448	1128699	.	+	.	ID=gene1014;Name=YPD4_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05080
NC_017154.1	Protein Homology	CDS	1128448	1128699	.	+	0	ID=cds1002;Parent=gene1014;Dbxref=Genbank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1128852	1129020	.	+	.	ID=id89;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1129076	1130116	.	-	.	ID=gene1015;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=YPD4_RS05085;old_locus_tag=YPD4_0872
NC_017154.1	Protein Homology	CDS	1129076	1130116	.	-	0	ID=cds1003;Parent=gene1015;Dbxref=Genbank:WP_002209839.1;Name=WP_002209839.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11
NC_017154.1	RefSeq	gene	1130505	1131192	.	-	.	ID=gene1016;Name=YPD4_RS05090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS05090;pseudo=true
NC_017154.1	Protein Homology	CDS	1130505	1131192	.	-	0	ID=cds1004;Parent=gene1016;exception=annotated by transcript or proteomic data;gbkey=CDS;product=DNA mismatch repair protein MutH;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1131425	1131616	.	+	.	ID=gene1017;Name=YPD4_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05095
NC_017154.1	Protein Homology	CDS	1131425	1131616	.	+	0	ID=cds1005;Parent=gene1017;Dbxref=Genbank:WP_002228074.1;Name=WP_002228074.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228074.1;transl_table=11
NC_017154.1	RefSeq	gene	1131613	1131864	.	+	.	ID=gene1018;Name=YPD4_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05100
NC_017154.1	Protein Homology	CDS	1131613	1131864	.	+	0	ID=cds1006;Parent=gene1018;Dbxref=Genbank:WP_002228075.1;Name=WP_002228075.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228075.1;transl_table=11
NC_017154.1	RefSeq	gene	1131890	1132417	.	+	.	ID=gene1019;Name=YPD4_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05105;old_locus_tag=YPD4_0874
NC_017154.1	Protein Homology	CDS	1131890	1132417	.	+	0	ID=cds1007;Parent=gene1019;Dbxref=Genbank:WP_002211381.1;Name=WP_002211381.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11
NC_017154.1	RefSeq	gene	1132430	1134676	.	+	.	ID=gene1020;Name=YPD4_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05110;old_locus_tag=YPD4_0875
NC_017154.1	Protein Homology	CDS	1132430	1134676	.	+	0	ID=cds1008;Parent=gene1020;Dbxref=Genbank:WP_002228076.1;Name=WP_002228076.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002228076.1;transl_table=11
NC_017154.1	RefSeq	gene	1134927	1135799	.	+	.	ID=gene1021;Name=YPD4_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05115;old_locus_tag=YPD4_0876
NC_017154.1	Protein Homology	CDS	1134927	1135799	.	+	0	ID=cds1009;Parent=gene1021;Dbxref=Genbank:WP_002211383.1;Name=WP_002211383.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11
NC_017154.1	RefSeq	gene	1135806	1136600	.	+	.	ID=gene1022;Name=YPD4_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05120;old_locus_tag=YPD4_0877
NC_017154.1	Protein Homology	CDS	1135806	1136600	.	+	0	ID=cds1010;Parent=gene1022;Dbxref=Genbank:WP_002211384.1;Name=WP_002211384.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_002211384.1;transl_table=11
NC_017154.1	RefSeq	gene	1136631	1136849	.	+	.	ID=gene1023;Name=YPD4_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05125
NC_017154.1	Protein Homology	CDS	1136631	1136849	.	+	0	ID=cds1011;Parent=gene1023;Dbxref=Genbank:WP_002217548.1;Name=WP_002217548.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217548.1;transl_table=11
NC_017154.1	RefSeq	gene	1136836	1137237	.	+	.	ID=gene1024;Name=YPD4_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05130
NC_017154.1	Protein Homology	CDS	1136836	1137237	.	+	0	ID=cds1012;Parent=gene1024;Dbxref=Genbank:WP_002217547.1;Name=WP_002217547.1;gbkey=CDS;product=prepilin cleavage protein;protein_id=WP_002217547.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1137230	1139188	.	+	.	ID=id90;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1137319	1138341	.	+	.	ID=gene1025;Name=YPD4_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05135;old_locus_tag=YPD4_0878
NC_017154.1	Protein Homology	CDS	1137319	1138341	.	+	0	ID=cds1013;Parent=gene1025;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	1138341	1139120	.	+	.	ID=gene1026;Name=YPD4_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05140;old_locus_tag=YPD4_0879
NC_017154.1	Protein Homology	CDS	1138341	1139120	.	+	0	ID=cds1014;Parent=gene1026;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	1139355	1139963	.	+	.	ID=gene1027;Name=YPD4_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05145;old_locus_tag=YPD4_0880
NC_017154.1	Protein Homology	CDS	1139355	1139963	.	+	0	ID=cds1015;Parent=gene1027;Dbxref=Genbank:WP_002211630.1;Name=WP_002211630.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002211630.1;transl_table=11
NC_017154.1	RefSeq	gene	1139960	1140430	.	+	.	ID=gene1028;Name=YPD4_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05150;old_locus_tag=YPD4_0881
NC_017154.1	Protein Homology	CDS	1139960	1140430	.	+	0	ID=cds1016;Parent=gene1028;Dbxref=Genbank:WP_002211629.1;Name=WP_002211629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211629.1;transl_table=11
NC_017154.1	RefSeq	gene	1140463	1140828	.	+	.	ID=gene1029;Name=YPD4_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05155;old_locus_tag=YPD4_0882
NC_017154.1	Protein Homology	CDS	1140463	1140828	.	+	0	ID=cds1017;Parent=gene1029;Dbxref=Genbank:WP_002211628.1;Name=WP_002211628.1;gbkey=CDS;product=peptidase;protein_id=WP_002211628.1;transl_table=11
NC_017154.1	RefSeq	gene	1140963	1144334	.	+	.	ID=gene1030;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=YPD4_RS05160;old_locus_tag=YPD4_0883
NC_017154.1	Protein Homology	CDS	1140963	1144334	.	+	0	ID=cds1018;Parent=gene1030;Dbxref=Genbank:WP_002211627.1;Name=WP_002211627.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_002211627.1;transl_table=11
NC_017154.1	RefSeq	gene	1144416	1147304	.	+	.	ID=gene1031;Name=YPD4_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05165;old_locus_tag=YPD4_0884
NC_017154.1	Protein Homology	CDS	1144416	1147304	.	+	0	ID=cds1019;Parent=gene1031;Dbxref=Genbank:WP_002211626.1;Name=WP_002211626.1;Note=degrades small peptides;gbkey=CDS;product=protease III;protein_id=WP_002211626.1;transl_table=11
NC_017154.1	RefSeq	gene	1147301	1150964	.	+	.	ID=gene1032;Name=recB;gbkey=Gene;gene=recB;gene_biotype=pseudogene;locus_tag=YPD4_RS05170;pseudo=true
NC_017154.1	Protein Homology	CDS	1147301	1150964	.	+	0	ID=cds1020;Parent=gene1032;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1150961	1152919	.	+	.	ID=gene1033;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=YPD4_RS05175;old_locus_tag=YPD4_0887
NC_017154.1	Protein Homology	CDS	1150961	1152919	.	+	0	ID=cds1021;Parent=gene1033;Dbxref=Genbank:WP_002215834.1;Name=WP_002215834.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=WP_002215834.1;transl_table=11
NC_017154.1	RefSeq	gene	1153074	1154399	.	-	.	ID=gene1034;Name=YPD4_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05180;old_locus_tag=YPD4_0888
NC_017154.1	Protein Homology	CDS	1153074	1154399	.	-	0	ID=cds1022;Parent=gene1034;Dbxref=Genbank:WP_002211624.1;Name=WP_002211624.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=amino-acid acetyltransferase;protein_id=WP_002211624.1;transl_table=11
NC_017154.1	RefSeq	gene	1154635	1155885	.	+	.	ID=gene1035;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=YPD4_RS05185;old_locus_tag=YPD4_0889
NC_017154.1	Protein Homology	CDS	1154635	1155885	.	+	0	ID=cds1023;Parent=gene1035;Dbxref=Genbank:WP_002211623.1;Name=WP_002211623.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002211623.1;transl_table=11
NC_017154.1	RefSeq	gene	1156115	1156191	.	-	.	ID=gene1036;Name=YPD4_RS05190;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS05190;old_locus_tag=YPD4_t9
NC_017154.1	tRNAscan-SE	tRNA	1156115	1156191	.	-	.	ID=rna11;Parent=gene1036;anticodon=(pos:complement(1156155..1156157));gbkey=tRNA;product=tRNA-Met
NC_017154.1	tRNAscan-SE	exon	1156115	1156191	.	-	.	ID=id91;Parent=rna11;anticodon=(pos:complement(1156155..1156157));gbkey=tRNA;product=tRNA-Met
NC_017154.1	RefSeq	gene	1156315	1156391	.	-	.	ID=gene1037;Name=YPD4_RS05195;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS05195;old_locus_tag=YPD4_t10
NC_017154.1	tRNAscan-SE	tRNA	1156315	1156391	.	-	.	ID=rna12;Parent=gene1037;anticodon=(pos:complement(1156355..1156357));gbkey=tRNA;product=tRNA-Met
NC_017154.1	tRNAscan-SE	exon	1156315	1156391	.	-	.	ID=id92;Parent=rna12;anticodon=(pos:complement(1156355..1156357));gbkey=tRNA;product=tRNA-Met
NC_017154.1	RefSeq	gene	1156607	1157779	.	+	.	ID=gene1038;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=YPD4_RS05200;old_locus_tag=YPD4_0890
NC_017154.1	Protein Homology	CDS	1156607	1157779	.	+	0	ID=cds1024;Parent=gene1038;Dbxref=Genbank:WP_002228046.1;Name=WP_002228046.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase;protein_id=WP_002228046.1;transl_table=11
NC_017154.1	RefSeq	gene	1157922	1158749	.	+	.	ID=gene1039;Name=YPD4_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05205;old_locus_tag=YPD4_0891
NC_017154.1	Protein Homology	CDS	1157922	1158749	.	+	0	ID=cds1025;Parent=gene1039;Dbxref=Genbank:WP_002212114.1;Name=WP_002212114.1;Note=accepts sulfur from CsdA;gbkey=CDS;product=sulfur acceptor protein CsdL;protein_id=WP_002212114.1;transl_table=11
NC_017154.1	RefSeq	gene	1158785	1159228	.	-	.	ID=gene1040;Name=YPD4_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05210;old_locus_tag=YPD4_0892
NC_017154.1	Protein Homology	CDS	1158785	1159228	.	-	0	ID=cds1026;Parent=gene1040;Dbxref=Genbank:WP_002212115.1;Name=WP_002212115.1;gbkey=CDS;product=Fe-S metabolism protein SufE;protein_id=WP_002212115.1;transl_table=11
NC_017154.1	RefSeq	gene	1159363	1160568	.	-	.	ID=gene1041;Name=YPD4_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05215;old_locus_tag=YPD4_0893
NC_017154.1	Protein Homology	CDS	1159363	1160568	.	-	0	ID=cds1027;Parent=gene1041;Dbxref=Genbank:WP_002212116.1;Name=WP_002212116.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_002212116.1;transl_table=11
NC_017154.1	RefSeq	gene	1161228	1162145	.	+	.	ID=gene1042;Name=YPD4_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05220;old_locus_tag=YPD4_0894
NC_017154.1	Protein Homology	CDS	1161228	1162145	.	+	0	ID=cds1028;Parent=gene1042;Dbxref=Genbank:WP_002212117.1;Name=WP_002212117.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212117.1;transl_table=11
NC_017154.1	RefSeq	gene	1162326	1162706	.	+	.	ID=gene1043;Name=YPD4_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05225;old_locus_tag=YPD4_0895
NC_017154.1	Protein Homology	CDS	1162326	1162706	.	+	0	ID=cds1029;Parent=gene1043;Dbxref=Genbank:WP_002353892.1;Name=WP_002353892.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353892.1;transl_table=11
NC_017154.1	RefSeq	gene	1162699	1163805	.	+	.	ID=gene1044;Name=YPD4_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05230;old_locus_tag=YPD4_0896
NC_017154.1	Protein Homology	CDS	1162699	1163805	.	+	0	ID=cds1030;Parent=gene1044;Dbxref=Genbank:WP_002212119.1;Name=WP_002212119.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase M;protein_id=WP_002212119.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1163846	1164024	.	+	.	ID=id93;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1164056	1164811	.	-	.	ID=gene1045;Name=YPD4_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05235;old_locus_tag=YPD4_0897
NC_017154.1	Protein Homology	CDS	1164056	1164811	.	-	0	ID=cds1031;Parent=gene1045;Dbxref=Genbank:WP_002215970.1;Name=WP_002215970.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease Xni;protein_id=WP_002215970.1;transl_table=11
NC_017154.1	RefSeq	gene	1165071	1166435	.	-	.	ID=gene1046;Name=YPD4_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05240;old_locus_tag=YPD4_0898
NC_017154.1	Protein Homology	CDS	1165071	1166435	.	-	0	ID=cds1032;Parent=gene1046;Dbxref=Genbank:WP_002212121.1;Name=WP_002212121.1;gbkey=CDS;product=LOG family protein;protein_id=WP_002212121.1;transl_table=11
NC_017154.1	RefSeq	gene	1166588	1167433	.	-	.	ID=gene1047;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=YPD4_RS05245;old_locus_tag=YPD4_0899
NC_017154.1	Protein Homology	CDS	1166588	1167433	.	-	0	ID=cds1033;Parent=gene1047;Dbxref=Genbank:WP_002212122.1;Name=WP_002212122.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=WP_002212122.1;transl_table=11
NC_017154.1	RefSeq	gene	1167565	1168116	.	+	.	ID=gene1048;Name=YPD4_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05250;old_locus_tag=YPD4_0900
NC_017154.1	Protein Homology	CDS	1167565	1168116	.	+	0	ID=cds1034;Parent=gene1048;Dbxref=Genbank:WP_002212123.1;Name=WP_002212123.1;gbkey=CDS;product=protein Syd;protein_id=WP_002212123.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1168654	1169375	.	+	.	ID=id94;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1168806	1169264	.	+	.	ID=gene1049;Name=YPD4_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05255;old_locus_tag=YPD4_0901
NC_017154.1	Protein Homology	CDS	1168806	1169264	.	+	0	ID=cds1035;Parent=gene1049;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	1169518	1169850	.	+	.	ID=gene1050;Name=YPD4_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05260;old_locus_tag=YPD4_0902
NC_017154.1	Protein Homology	CDS	1169518	1169850	.	+	0	ID=cds1036;Parent=gene1050;Dbxref=Genbank:WP_002212124.1;Name=WP_002212124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212124.1;transl_table=11
NC_017154.1	RefSeq	gene	1169850	1170623	.	+	.	ID=gene1051;Name=YPD4_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05265;old_locus_tag=YPD4_0903
NC_017154.1	Protein Homology	CDS	1169850	1170623	.	+	0	ID=cds1037;Parent=gene1051;Dbxref=Genbank:WP_002212125.1;Name=WP_002212125.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_002212125.1;transl_table=11
NC_017154.1	RefSeq	gene	1170651	1171100	.	+	.	ID=gene1052;Name=YPD4_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05270;old_locus_tag=YPD4_0904
NC_017154.1	Protein Homology	CDS	1170651	1171100	.	+	0	ID=cds1038;Parent=gene1052;Dbxref=Genbank:WP_002212126.1;Name=WP_002212126.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002212126.1;transl_table=11
NC_017154.1	RefSeq	gene	1171190	1171579	.	-	.	ID=gene1053;Name=YPD4_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05275;old_locus_tag=YPD4_0905
NC_017154.1	Protein Homology	CDS	1171190	1171579	.	-	0	ID=cds1039;Parent=gene1053;Dbxref=Genbank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212127.1;transl_table=11
NC_017154.1	RefSeq	gene	1171703	1172527	.	-	.	ID=gene1054;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=YPD4_RS05280;old_locus_tag=YPD4_0906
NC_017154.1	Protein Homology	CDS	1171703	1172527	.	-	0	ID=cds1040;Parent=gene1054;Dbxref=Genbank:WP_002212128.1;Name=WP_002212128.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002212128.1;transl_table=11
NC_017154.1	RefSeq	gene	1172702	1175383	.	-	.	ID=gene1055;Name=YPD4_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05285;old_locus_tag=YPD4_0907
NC_017154.1	Protein Homology	CDS	1172702	1175383	.	-	0	ID=cds1041;Parent=gene1055;Dbxref=Genbank:WP_002212129.1;Name=WP_002212129.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=uridylyltransferase;protein_id=WP_002212129.1;transl_table=11
NC_017154.1	RefSeq	gene	1175443	1176234	.	-	.	ID=gene1056;Name=YPD4_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05290;old_locus_tag=YPD4_0908
NC_017154.1	Protein Homology	CDS	1175443	1176234	.	-	0	ID=cds1042;Parent=gene1056;Dbxref=Genbank:WP_002212130.1;Name=WP_002212130.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_002212130.1;transl_table=11
NC_017154.1	RefSeq	gene	1176669	1177394	.	+	.	ID=gene1057;Name=YPD4_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05295;old_locus_tag=YPD4_0909
NC_017154.1	Protein Homology	CDS	1176669	1177394	.	+	0	ID=cds1043;Parent=gene1057;Dbxref=Genbank:WP_002221800.1;Name=WP_002221800.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11
NC_017154.1	RefSeq	gene	1177522	1178378	.	+	.	ID=gene1058;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=pseudogene;locus_tag=YPD4_RS05300;pseudo=true
NC_017154.1	Protein Homology	CDS	1177522	1178378	.	+	0	ID=cds1044;Parent=gene1058;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=tsf;product=elongation factor Ts;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1178587	1179312	.	+	.	ID=gene1059;Name=YPD4_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05305;old_locus_tag=YPD4_0912
NC_017154.1	Protein Homology	CDS	1178587	1179312	.	+	0	ID=cds1045;Parent=gene1059;Dbxref=Genbank:WP_002212133.1;Name=WP_002212133.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_002212133.1;transl_table=11
NC_017154.1	RefSeq	gene	1179448	1180005	.	+	.	ID=gene1060;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=YPD4_RS05310;old_locus_tag=YPD4_0913
NC_017154.1	Protein Homology	CDS	1179448	1180005	.	+	0	ID=cds1046;Parent=gene1060;Dbxref=Genbank:WP_002212134.1;Name=WP_002212134.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome-recycling factor;protein_id=WP_002212134.1;transl_table=11
NC_017154.1	RefSeq	gene	1180219	1181415	.	+	.	ID=gene1061;Name=YPD4_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05315;old_locus_tag=YPD4_0914
NC_017154.1	Protein Homology	CDS	1180219	1181415	.	+	0	ID=cds1047;Parent=gene1061;Dbxref=Genbank:WP_002212135.1;Name=WP_002212135.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_002212135.1;transl_table=11
NC_017154.1	RefSeq	gene	1181639	1182397	.	+	.	ID=gene1062;Name=YPD4_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05320;old_locus_tag=YPD4_0915
NC_017154.1	Protein Homology	CDS	1181639	1182397	.	+	0	ID=cds1048;Parent=gene1062;Dbxref=Genbank:WP_002212136.1;Name=WP_002212136.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=WP_002212136.1;transl_table=11
NC_017154.1	RefSeq	gene	1182407	1183255	.	+	.	ID=gene1063;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=YPD4_RS05325;old_locus_tag=YPD4_0916
NC_017154.1	Protein Homology	CDS	1182407	1183255	.	+	0	ID=cds1049;Parent=gene1063;Dbxref=Genbank:WP_002212137.1;Name=WP_002212137.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=WP_002212137.1;transl_table=11
NC_017154.1	RefSeq	gene	1183284	1184639	.	+	.	ID=gene1064;Name=YPD4_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05330;old_locus_tag=YPD4_0917
NC_017154.1	Protein Homology	CDS	1183284	1184639	.	+	0	ID=cds1050;Parent=gene1064;Dbxref=Genbank:WP_002212138.1;Name=WP_002212138.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=protease RseP;protein_id=WP_002212138.1;transl_table=11
NC_017154.1	RefSeq	gene	1184676	1187064	.	+	.	ID=gene1065;Name=YPD4_RS05335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS05335;pseudo=true
NC_017154.1	Protein Homology	CDS	1184676	1187064	.	+	0	ID=cds1051;Parent=gene1065;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;exception=annotated by transcript or proteomic data;gbkey=CDS;product=outer membrane assembly protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1187222	1187719	.	+	.	ID=gene1066;Name=YPD4_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05340;old_locus_tag=YPD4_0920
NC_017154.1	Protein Homology	CDS	1187222	1187719	.	+	0	ID=cds1052;Parent=gene1066;Dbxref=Genbank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;product=chaperone protein Skp;protein_id=WP_002212140.1;transl_table=11
NC_017154.1	RefSeq	gene	1187723	1188745	.	+	.	ID=gene1067;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=YPD4_RS05345;old_locus_tag=YPD4_0921
NC_017154.1	Protein Homology	CDS	1187723	1188745	.	+	0	ID=cds1053;Parent=gene1067;Dbxref=Genbank:WP_002212141.1;Name=WP_002212141.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_002212141.1;transl_table=11
NC_017154.1	RefSeq	gene	1188903	1189433	.	+	.	ID=gene1068;Name=YPD4_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05350;old_locus_tag=YPD4_0922
NC_017154.1	Protein Homology	CDS	1188903	1189433	.	+	0	ID=cds1054;Parent=gene1068;Dbxref=Genbank:WP_002217656.1;Name=WP_002217656.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002217656.1;transl_table=11
NC_017154.1	RefSeq	gene	1189437	1190225	.	+	.	ID=gene1069;Name=YPD4_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05355;old_locus_tag=YPD4_0923
NC_017154.1	Protein Homology	CDS	1189437	1190225	.	+	0	ID=cds1055;Parent=gene1069;Dbxref=Genbank:WP_002212143.1;Name=WP_002212143.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002212143.1;transl_table=11
NC_017154.1	RefSeq	gene	1190229	1191413	.	+	.	ID=gene1070;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=YPD4_RS05360;old_locus_tag=YPD4_0924
NC_017154.1	Protein Homology	CDS	1190229	1191413	.	+	0	ID=cds1056;Parent=gene1070;Dbxref=Genbank:WP_002212144.1;Name=WP_002212144.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_002212144.1;transl_table=11
NC_017154.1	RefSeq	gene	1191410	1192006	.	+	.	ID=gene1071;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=YPD4_RS05365;old_locus_tag=YPD4_0925
NC_017154.1	Protein Homology	CDS	1191410	1192006	.	+	0	ID=cds1057;Parent=gene1071;Dbxref=Genbank:WP_002212145.1;Name=WP_002212145.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11
NC_017154.1	RefSeq	gene	1192169	1195651	.	+	.	ID=gene1072;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=YPD4_RS05370;old_locus_tag=YPD4_0926
NC_017154.1	Protein Homology	CDS	1192169	1195651	.	+	0	ID=cds1058;Parent=gene1072;Dbxref=Genbank:WP_002228634.1;Name=WP_002228634.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_002228634.1;transl_table=11
NC_017154.1	RefSeq	gene	1195664	1196623	.	+	.	ID=gene1073;Name=YPD4_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05375;old_locus_tag=YPD4_0927
NC_017154.1	Protein Homology	CDS	1195664	1196623	.	+	0	ID=cds1059;Parent=gene1073;Dbxref=Genbank:WP_002212147.1;Name=WP_002212147.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002212147.1;transl_table=11
NC_017154.1	RefSeq	gene	1196807	1197205	.	+	.	ID=gene1074;Name=YPD4_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05380;old_locus_tag=YPD4_0928
NC_017154.1	Protein Homology	CDS	1196807	1197205	.	+	0	ID=cds1060;Parent=gene1074;Dbxref=Genbank:WP_002212148.1;Name=WP_002212148.1;gbkey=CDS;product=lyase;protein_id=WP_002212148.1;transl_table=11
NC_017154.1	RefSeq	gene	1197207	1198589	.	+	.	ID=gene1075;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=YPD4_RS05385;old_locus_tag=YPD4_0929
NC_017154.1	Protein Homology	CDS	1197207	1198589	.	+	0	ID=cds1061;Parent=gene1075;Dbxref=Genbank:WP_002212149.1;Name=WP_002212149.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthase;protein_id=WP_002212149.1;transl_table=11
NC_017154.1	RefSeq	gene	1198826	1199143	.	+	.	ID=gene1076;Name=YPD4_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05390;old_locus_tag=YPD4_0930
NC_017154.1	Protein Homology	CDS	1198826	1199143	.	+	0	ID=cds1062;Parent=gene1076;Dbxref=Genbank:WP_002212150.1;Name=WP_002212150.1;gbkey=CDS;product=cytochrome C554;protein_id=WP_002212150.1;transl_table=11
NC_017154.1	RefSeq	gene	1199408	1199668	.	-	.	ID=gene1077;Name=YPD4_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05395
NC_017154.1	Protein Homology	CDS	1199408	1199668	.	-	0	ID=cds1063;Parent=gene1077;Dbxref=Genbank:WP_002218374.1;Name=WP_002218374.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11
NC_017154.1	RefSeq	gene	1199655	1199855	.	-	.	ID=gene1078;Name=YPD4_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05400
NC_017154.1	Protein Homology	CDS	1199655	1199855	.	-	0	ID=cds1064;Parent=gene1078;Dbxref=Genbank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212152.1;transl_table=11
NC_017154.1	RefSeq	gene	1200096	1200644	.	+	.	ID=gene1079;Name=YPD4_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05405;old_locus_tag=YPD4_0931
NC_017154.1	Protein Homology	CDS	1200096	1200644	.	+	0	ID=cds1065;Parent=gene1079;Dbxref=Genbank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212153.1;transl_table=11
NC_017154.1	RefSeq	gene	1200647	1201063	.	+	.	ID=gene1080;Name=YPD4_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05410;old_locus_tag=YPD4_0932
NC_017154.1	Protein Homology	CDS	1200647	1201063	.	+	0	ID=cds1066;Parent=gene1080;Dbxref=Genbank:WP_002212154.1;Name=WP_002212154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212154.1;transl_table=11
NC_017154.1	RefSeq	gene	1201148	1201831	.	+	.	ID=gene1081;Name=YPD4_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05415;old_locus_tag=YPD4_0933
NC_017154.1	Protein Homology	CDS	1201148	1201831	.	+	0	ID=cds1067;Parent=gene1081;Dbxref=Genbank:WP_002212155.1;Name=WP_002212155.1;gbkey=CDS;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=WP_002212155.1;transl_table=11
NC_017154.1	RefSeq	gene	1201965	1203683	.	-	.	ID=gene1082;Name=YPD4_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05420;old_locus_tag=YPD4_0934
NC_017154.1	Protein Homology	CDS	1201965	1203683	.	-	0	ID=cds1068;Parent=gene1082;Dbxref=Genbank:WP_002212156.1;Name=WP_002212156.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_002212156.1;transl_table=11
NC_017154.1	RefSeq	gene	1203787	1204494	.	-	.	ID=gene1083;Name=YPD4_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05425;old_locus_tag=YPD4_0935
NC_017154.1	Protein Homology	CDS	1203787	1204494	.	-	0	ID=cds1069;Parent=gene1083;Dbxref=Genbank:WP_002212157.1;Name=WP_002212157.1;gbkey=CDS;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=WP_002212157.1;transl_table=11
NC_017154.1	RefSeq	gene	1204491	1204897	.	-	.	ID=gene1084;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=pseudogene;locus_tag=YPD4_RS05430;pseudo=true
NC_017154.1	Protein Homology	CDS	1204491	1204897	.	-	0	ID=cds1070;Parent=gene1084;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=rcsF;product=colanic acid biosynthesis protein RcsF;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1205015	1205830	.	-	.	ID=gene1085;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=YPD4_RS05435;old_locus_tag=YPD4_0936
NC_017154.1	Protein Homology	CDS	1205015	1205830	.	-	0	ID=cds1071;Parent=gene1085;Dbxref=Genbank:WP_002212159.1;Name=WP_002212159.1;gbkey=CDS;gene=metQ;product=D-methionine-binding lipoprotein MetQ;protein_id=WP_002212159.1;transl_table=11
NC_017154.1	RefSeq	gene	1205894	1206547	.	-	.	ID=gene1086;Name=YPD4_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05440;old_locus_tag=YPD4_0937
NC_017154.1	Protein Homology	CDS	1205894	1206547	.	-	0	ID=cds1072;Parent=gene1086;Dbxref=Genbank:WP_002212160.1;Name=WP_002212160.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter;protein_id=WP_002212160.1;transl_table=11
NC_017154.1	RefSeq	gene	1206540	1207572	.	-	.	ID=gene1087;Name=metN;gbkey=Gene;gene=metN;gene_biotype=pseudogene;locus_tag=YPD4_RS05445;pseudo=true
NC_017154.1	Protein Homology	CDS	1206540	1207572	.	-	0	ID=cds1073;Parent=gene1087;Note=part of the metNIQ transport system for methionine;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=metN;product=DL-methionine transporter ATP-binding subunit;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1207759	1208325	.	+	.	ID=gene1088;Name=YPD4_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05450;old_locus_tag=YPD4_0939
NC_017154.1	Protein Homology	CDS	1207759	1208325	.	+	0	ID=cds1074;Parent=gene1088;Dbxref=Genbank:WP_015683885.1;Name=WP_015683885.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_015683885.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1208491	1214108	.	+	.	ID=id95;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1208764	1210312	.	+	.	ID=gene1089;Name=YPD4_RS05460;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS05460;old_locus_tag=YPD4_r4
NC_017154.1	RefSeq	rRNA	1208764	1210312	.	+	.	ID=rna13;Parent=gene1089;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	exon	1208764	1210312	.	+	.	ID=id96;Parent=rna13;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	gene	1210446	1210521	.	+	.	ID=gene1090;Name=YPD4_RS05465;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS05465;old_locus_tag=YPD4_t11
NC_017154.1	tRNAscan-SE	tRNA	1210446	1210521	.	+	.	ID=rna14;Parent=gene1090;anticodon=(pos:1210480..1210482);gbkey=tRNA;product=tRNA-Glu
NC_017154.1	tRNAscan-SE	exon	1210446	1210521	.	+	.	ID=id97;Parent=rna14;anticodon=(pos:1210480..1210482);gbkey=tRNA;product=tRNA-Glu
NC_017154.1	RefSeq	gene	1210765	1213698	.	+	.	ID=gene1091;Name=YPD4_RS05470;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS05470;old_locus_tag=YPD4_r5
NC_017154.1	RefSeq	rRNA	1210765	1213698	.	+	.	ID=rna15;Parent=gene1091;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	exon	1210765	1213698	.	+	.	ID=id98;Parent=rna15;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	gene	1213790	1213905	.	+	.	ID=gene1092;Name=YPD4_RS05475;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS05475
NC_017154.1	cmsearch	rRNA	1213790	1213905	.	+	.	ID=rna16;Parent=gene1092;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	cmsearch	exon	1213790	1213905	.	+	.	ID=id99;Parent=rna16;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	RefSeq	gene	1214031	1214107	.	+	.	ID=gene1093;Name=YPD4_RS05480;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS05480;old_locus_tag=YPD4_t12
NC_017154.1	tRNAscan-SE	tRNA	1214031	1214107	.	+	.	ID=rna17;Parent=gene1093;anticodon=(pos:1214065..1214067);gbkey=tRNA;product=tRNA-Asp
NC_017154.1	tRNAscan-SE	exon	1214031	1214107	.	+	.	ID=id100;Parent=rna17;anticodon=(pos:1214065..1214067);gbkey=tRNA;product=tRNA-Asp
NC_017154.1	RefSeq	gene	1214466	1215269	.	+	.	ID=gene1094;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=YPD4_RS05485;old_locus_tag=YPD4_0940
NC_017154.1	Protein Homology	CDS	1214466	1215269	.	+	0	ID=cds1075;Parent=gene1094;Dbxref=Genbank:WP_002210693.1;Name=WP_002210693.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconic acid reductase B;protein_id=WP_002210693.1;transl_table=11
NC_017154.1	RefSeq	gene	1215322	1215768	.	+	.	ID=gene1095;Name=YPD4_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05490;old_locus_tag=YPD4_0941
NC_017154.1	Protein Homology	CDS	1215322	1215768	.	+	0	ID=cds1076;Parent=gene1095;Dbxref=Genbank:WP_002210694.1;Name=WP_002210694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210694.1;transl_table=11
NC_017154.1	RefSeq	gene	1216150	1216911	.	+	.	ID=gene1096;Name=YPD4_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05495;old_locus_tag=YPD4_0942
NC_017154.1	Protein Homology	CDS	1216150	1216911	.	+	0	ID=cds1077;Parent=gene1096;Dbxref=Genbank:WP_002210695.1;Name=WP_002210695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210695.1;transl_table=11
NC_017154.1	RefSeq	gene	1216953	1218341	.	-	.	ID=gene1097;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=YPD4_RS05500;old_locus_tag=YPD4_0943
NC_017154.1	Protein Homology	CDS	1216953	1218341	.	-	0	ID=cds1078;Parent=gene1097;Dbxref=Genbank:WP_002228041.1;Name=WP_002228041.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_002228041.1;transl_table=11
NC_017154.1	RefSeq	gene	1218413	1219168	.	-	.	ID=gene1098;Name=YPD4_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05505;old_locus_tag=YPD4_0944
NC_017154.1	Protein Homology	CDS	1218413	1219168	.	-	0	ID=cds1079;Parent=gene1098;Dbxref=Genbank:WP_002210697.1;Name=WP_002210697.1;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_002210697.1;transl_table=11
NC_017154.1	RefSeq	gene	1219213	1219932	.	+	.	ID=gene1099;Name=YPD4_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05510;old_locus_tag=YPD4_0945
NC_017154.1	Protein Homology	CDS	1219213	1219932	.	+	0	ID=cds1080;Parent=gene1099;Dbxref=Genbank:WP_002210698.1;Name=WP_002210698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210698.1;transl_table=11
NC_017154.1	RefSeq	gene	1219987	1220451	.	-	.	ID=gene1100;Name=YPD4_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05515;old_locus_tag=YPD4_0946
NC_017154.1	Protein Homology	CDS	1219987	1220451	.	-	0	ID=cds1081;Parent=gene1100;Dbxref=Genbank:WP_002210699.1;Name=WP_002210699.1;gbkey=CDS;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11
NC_017154.1	RefSeq	gene	1220521	1221285	.	+	.	ID=gene1101;Name=YPD4_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05520;old_locus_tag=YPD4_0947
NC_017154.1	Protein Homology	CDS	1220521	1221285	.	+	0	ID=cds1082;Parent=gene1101;Dbxref=Genbank:WP_002210700.1;Name=WP_002210700.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11
NC_017154.1	RefSeq	gene	1221398	1221474	.	+	.	ID=gene1102;Name=YPD4_RS05525;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS05525;old_locus_tag=YPD4_t13
NC_017154.1	tRNAscan-SE	tRNA	1221398	1221474	.	+	.	ID=rna18;Parent=gene1102;anticodon=(pos:1221432..1221434);gbkey=tRNA;product=tRNA-Asp
NC_017154.1	tRNAscan-SE	exon	1221398	1221474	.	+	.	ID=id101;Parent=rna18;anticodon=(pos:1221432..1221434);gbkey=tRNA;product=tRNA-Asp
NC_017154.1	RefSeq	gene	1221531	1223015	.	-	.	ID=gene1103;Name=YPD4_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05530;old_locus_tag=YPD4_0948
NC_017154.1	Protein Homology	CDS	1221531	1223015	.	-	0	ID=cds1083;Parent=gene1103;Dbxref=Genbank:WP_002210701.1;Name=WP_002210701.1;gbkey=CDS;product=permease;protein_id=WP_002210701.1;transl_table=11
NC_017154.1	RefSeq	gene	1223239	1223361	.	+	.	ID=gene1104;Name=YPD4_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05535
NC_017154.1	Protein Homology	CDS	1223239	1223361	.	+	0	ID=cds1084;Parent=gene1104;Dbxref=Genbank:WP_002210702.1;Name=WP_002210702.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210702.1;transl_table=11
NC_017154.1	RefSeq	gene	1223354	1223587	.	+	.	ID=gene1105;Name=YPD4_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05540
NC_017154.1	Protein Homology	CDS	1223354	1223587	.	+	0	ID=cds1085;Parent=gene1105;Dbxref=Genbank:WP_002210703.1;Name=WP_002210703.1;gbkey=CDS;product=polysaccharide deacetylase;protein_id=WP_002210703.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1223569	1225529	.	+	.	ID=id102;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1223638	1224417	.	-	.	ID=gene1106;Name=YPD4_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05545;old_locus_tag=YPD4_0949
NC_017154.1	Protein Homology	CDS	1223638	1224417	.	-	0	ID=cds1086;Parent=gene1106;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	1224417	1225439	.	-	.	ID=gene1107;Name=YPD4_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05550;old_locus_tag=YPD4_0950
NC_017154.1	Protein Homology	CDS	1224417	1225439	.	-	0	ID=cds1087;Parent=gene1107;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	1225453	1225629	.	-	.	ID=gene1108;Name=YPD4_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05555
NC_017154.1	Protein Homology	CDS	1225453	1225629	.	-	0	ID=cds1088;Parent=gene1108;Dbxref=Genbank:WP_002210704.1;Name=WP_002210704.1;gbkey=CDS;product=integrase;protein_id=WP_002210704.1;transl_table=11
NC_017154.1	RefSeq	gene	1226044	1226361	.	+	.	ID=gene1109;Name=YPD4_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05560
NC_017154.1	Protein Homology	CDS	1226044	1226361	.	+	0	ID=cds1089;Parent=gene1109;Dbxref=Genbank:WP_002215951.1;Name=WP_002215951.1;gbkey=CDS;product=addiction module protein;protein_id=WP_002215951.1;transl_table=11
NC_017154.1	RefSeq	gene	1226367	1226681	.	+	.	ID=gene1110;Name=YPD4_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05565
NC_017154.1	Protein Homology	CDS	1226367	1226681	.	+	0	ID=cds1090;Parent=gene1110;Dbxref=Genbank:WP_002210705.1;Name=WP_002210705.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210705.1;transl_table=11
NC_017154.1	RefSeq	gene	1227030	1228118	.	-	.	ID=gene1111;Name=YPD4_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05570;old_locus_tag=YPD4_0951
NC_017154.1	Protein Homology	CDS	1227030	1228118	.	-	0	ID=cds1091;Parent=gene1111;Dbxref=Genbank:WP_002210707.1;Name=WP_002210707.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210707.1;transl_table=11
NC_017154.1	RefSeq	gene	1228115	1229074	.	-	.	ID=gene1112;Name=YPD4_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05575
NC_017154.1	Protein Homology	CDS	1228115	1229074	.	-	0	ID=cds1092;Parent=gene1112;Dbxref=Genbank:WP_002215950.1;Name=WP_002215950.1;gbkey=CDS;product=DNA primase;protein_id=WP_002215950.1;transl_table=11
NC_017154.1	RefSeq	gene	1229067	1229609	.	-	.	ID=gene1113;Name=YPD4_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05580
NC_017154.1	Protein Homology	CDS	1229067	1229609	.	-	0	ID=cds1093;Parent=gene1113;Dbxref=Genbank:WP_002215949.1;Name=WP_002215949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215949.1;transl_table=11
NC_017154.1	RefSeq	gene	1229609	1229809	.	-	.	ID=gene1114;Name=YPD4_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05585
NC_017154.1	Protein Homology	CDS	1229609	1229809	.	-	0	ID=cds1094;Parent=gene1114;Dbxref=Genbank:WP_002210709.1;Name=WP_002210709.1;gbkey=CDS;product=dipicolinate synthase;protein_id=WP_002210709.1;transl_table=11
NC_017154.1	RefSeq	gene	1229802	1230689	.	-	.	ID=gene1115;Name=YPD4_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05590;old_locus_tag=YPD4_0953
NC_017154.1	Protein Homology	CDS	1229802	1230689	.	-	0	ID=cds1095;Parent=gene1115;Dbxref=Genbank:WP_002210710.1;Name=WP_002210710.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210710.1;transl_table=11
NC_017154.1	RefSeq	gene	1230711	1231034	.	-	.	ID=gene1116;Name=YPD4_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05595
NC_017154.1	Protein Homology	CDS	1230711	1231034	.	-	0	ID=cds1096;Parent=gene1116;Dbxref=Genbank:WP_011566205.1;Name=WP_011566205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011566205.1;transl_table=11
NC_017154.1	RefSeq	gene	1231093	1231266	.	-	.	ID=gene1117;Name=YPD4_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05600
NC_017154.1	Protein Homology	CDS	1231093	1231266	.	-	0	ID=cds1097;Parent=gene1117;Dbxref=Genbank:WP_002215947.1;Name=WP_002215947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215947.1;transl_table=11
NC_017154.1	RefSeq	gene	1231497	1231724	.	+	.	ID=gene1118;Name=YPD4_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05605
NC_017154.1	Protein Homology	CDS	1231497	1231724	.	+	0	ID=cds1098;Parent=gene1118;Dbxref=Genbank:WP_002215946.1;Name=WP_002215946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215946.1;transl_table=11
NC_017154.1	RefSeq	gene	1231886	1233556	.	-	.	ID=gene1119;Name=YPD4_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05610;old_locus_tag=YPD4_0954
NC_017154.1	Protein Homology	CDS	1231886	1233556	.	-	0	ID=cds1099;Parent=gene1119;Dbxref=Genbank:WP_002215945.1;Name=WP_002215945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215945.1;transl_table=11
NC_017154.1	RefSeq	gene	1233607	1234695	.	-	.	ID=gene1120;Name=YPD4_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05615;old_locus_tag=YPD4_0955
NC_017154.1	Protein Homology	CDS	1233607	1234695	.	-	0	ID=cds1100;Parent=gene1120;Dbxref=Genbank:WP_002210712.1;Name=WP_002210712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210712.1;transl_table=11
NC_017154.1	RefSeq	gene	1234774	1235973	.	-	.	ID=gene1121;Name=YPD4_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05620;old_locus_tag=YPD4_0956
NC_017154.1	Protein Homology	CDS	1234774	1235973	.	-	0	ID=cds1101;Parent=gene1121;Dbxref=Genbank:WP_002210713.1;Name=WP_002210713.1;gbkey=CDS;product=integrase;protein_id=WP_002210713.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1236085	1236807	.	+	.	ID=id103;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1236197	1236655	.	-	.	ID=gene1122;Name=YPD4_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05625;old_locus_tag=YPD4_0957
NC_017154.1	Protein Homology	CDS	1236197	1236655	.	-	0	ID=cds1102;Parent=gene1122;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	1236645	1236845	.	-	.	ID=gene1123;Name=YPD4_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05630
NC_017154.1	Protein Homology	CDS	1236645	1236845	.	-	0	ID=cds1103;Parent=gene1123;Dbxref=Genbank:WP_044023334.1;Name=WP_044023334.1;gbkey=CDS;product=transposase;protein_id=WP_044023334.1;transl_table=11
NC_017154.1	RefSeq	gene	1237290	1237772	.	-	.	ID=gene1124;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=YPD4_RS05635;old_locus_tag=YPD4_0958
NC_017154.1	Protein Homology	CDS	1237290	1237772	.	-	0	ID=cds1104;Parent=gene1124;Dbxref=Genbank:WP_002210714.1;Name=WP_002210714.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_002210714.1;transl_table=11
NC_017154.1	RefSeq	gene	1237933	1238367	.	+	.	ID=gene1125;Name=YPD4_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05640;old_locus_tag=YPD4_0959
NC_017154.1	Protein Homology	CDS	1237933	1238367	.	+	0	ID=cds1105;Parent=gene1125;Dbxref=Genbank:WP_002210715.1;Name=WP_002210715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210715.1;transl_table=11
NC_017154.1	RefSeq	gene	1238360	1238644	.	+	.	ID=gene1126;Name=YPD4_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05645
NC_017154.1	Protein Homology	CDS	1238360	1238644	.	+	0	ID=cds1106;Parent=gene1126;Dbxref=Genbank:WP_002210716.1;Name=WP_002210716.1;gbkey=CDS;product=protein RnfH;protein_id=WP_002210716.1;transl_table=11
NC_017154.1	RefSeq	gene	1238794	1239135	.	-	.	ID=gene1127;Name=YPD4_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05650;old_locus_tag=YPD4_0960
NC_017154.1	Protein Homology	CDS	1238794	1239135	.	-	0	ID=cds1107;Parent=gene1127;Dbxref=Genbank:WP_002210717.1;Name=WP_002210717.1;gbkey=CDS;product=outer membrane biogenesis protein BamE;protein_id=WP_002210717.1;transl_table=11
NC_017154.1	RefSeq	gene	1239249	1240910	.	-	.	ID=gene1128;Name=YPD4_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05655;old_locus_tag=YPD4_0961
NC_017154.1	Protein Homology	CDS	1239249	1240910	.	-	0	ID=cds1108;Parent=gene1128;Dbxref=Genbank:WP_002210718.1;Name=WP_002210718.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_002210718.1;transl_table=11
NC_017154.1	RefSeq	gene	1240997	1241878	.	-	.	ID=gene1129;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=YPD4_RS05660;old_locus_tag=YPD4_0962
NC_017154.1	Protein Homology	CDS	1240997	1241878	.	-	0	ID=cds1109;Parent=gene1129;Dbxref=Genbank:WP_002210719.1;Name=WP_002210719.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=NAD kinase;protein_id=WP_002210719.1;transl_table=11
NC_017154.1	RefSeq	gene	1242002	1242580	.	+	.	ID=gene1130;Name=YPD4_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05665;old_locus_tag=YPD4_0963
NC_017154.1	Protein Homology	CDS	1242002	1242580	.	+	0	ID=cds1110;Parent=gene1130;Dbxref=Genbank:WP_002210720.1;Name=WP_002210720.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=protein GrpE;protein_id=WP_002210720.1;transl_table=11
NC_017154.1	RefSeq	gene	1242688	1243968	.	-	.	ID=gene1131;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=YPD4_RS05670;old_locus_tag=YPD4_0964
NC_017154.1	Protein Homology	CDS	1242688	1243968	.	-	0	ID=cds1111;Parent=gene1131;Dbxref=Genbank:WP_002210721.1;Name=WP_002210721.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=WP_002210721.1;transl_table=11
NC_017154.1	RefSeq	gene	1244678	1245067	.	+	.	ID=gene1132;Name=YPD4_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05675
NC_017154.1	Protein Homology	CDS	1244678	1245067	.	+	0	ID=cds1112;Parent=gene1132;Dbxref=Genbank:WP_002210722.1;Name=WP_002210722.1;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=WP_002210722.1;transl_table=11
NC_017154.1	RefSeq	gene	1245061	1245408	.	+	.	ID=gene1133;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=YPD4_RS05680;old_locus_tag=YPD4_0965
NC_017154.1	Protein Homology	CDS	1245061	1245408	.	+	0	ID=cds1113;Parent=gene1133;Dbxref=Genbank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=WP_002210723.1;transl_table=11
NC_017154.1	RefSeq	gene	1245409	1247175	.	+	.	ID=gene1134;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=YPD4_RS05685;old_locus_tag=YPD4_0966
NC_017154.1	Protein Homology	CDS	1245409	1247175	.	+	0	ID=cds1114;Parent=gene1134;Dbxref=Genbank:WP_002210724.1;Name=WP_002210724.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11
NC_017154.1	RefSeq	gene	1247225	1247941	.	+	.	ID=gene1135;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=YPD4_RS05690;old_locus_tag=YPD4_0967
NC_017154.1	Protein Homology	CDS	1247225	1247941	.	+	0	ID=cds1115;Parent=gene1135;Dbxref=Genbank:WP_002210725.1;Name=WP_002210725.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11
NC_017154.1	RefSeq	gene	1248297	1251104	.	+	.	ID=gene1136;Name=YPD4_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05695;old_locus_tag=YPD4_0968
NC_017154.1	Protein Homology	CDS	1248297	1251104	.	+	0	ID=cds1116;Parent=gene1136;Dbxref=Genbank:WP_002210726.1;Name=WP_002210726.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1;protein_id=WP_002210726.1;transl_table=11
NC_017154.1	RefSeq	gene	1251134	1252357	.	+	.	ID=gene1137;Name=YPD4_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05700;old_locus_tag=YPD4_0969
NC_017154.1	Protein Homology	CDS	1251134	1252357	.	+	0	ID=cds1117;Parent=gene1137;Dbxref=Genbank:WP_002210727.1;Name=WP_002210727.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=WP_002210727.1;transl_table=11
NC_017154.1	RefSeq	gene	1252470	1253636	.	+	.	ID=gene1138;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=YPD4_RS05705;old_locus_tag=YPD4_0970
NC_017154.1	Protein Homology	CDS	1252470	1253636	.	+	0	ID=cds1118;Parent=gene1138;Dbxref=Genbank:WP_002210728.1;Name=WP_002210728.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11
NC_017154.1	RefSeq	gene	1253636	1254508	.	+	.	ID=gene1139;Name=YPD4_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05710;old_locus_tag=YPD4_0971
NC_017154.1	Protein Homology	CDS	1253636	1254508	.	+	0	ID=cds1119;Parent=gene1139;Dbxref=Genbank:WP_002210729.1;Name=WP_002210729.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=WP_002210729.1;transl_table=11
NC_017154.1	RefSeq	gene	1255275	1256843	.	+	.	ID=gene1140;Name=YPD4_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05715;old_locus_tag=YPD4_0972
NC_017154.1	Protein Homology	CDS	1255275	1256843	.	+	0	ID=cds1120;Parent=gene1140;Dbxref=Genbank:WP_002210730.1;Name=WP_002210730.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11
NC_017154.1	RefSeq	gene	1256858	1257997	.	+	.	ID=gene1141;Name=YPD4_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05720;old_locus_tag=YPD4_0973
NC_017154.1	Protein Homology	CDS	1256858	1257997	.	+	0	ID=cds1121;Parent=gene1141;Dbxref=Genbank:WP_002210731.1;Name=WP_002210731.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002210731.1;transl_table=11
NC_017154.1	RefSeq	gene	1258010	1258144	.	+	.	ID=gene1142;Name=YPD4_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05725
NC_017154.1	Protein Homology	CDS	1258010	1258144	.	+	0	ID=cds1122;Parent=gene1142;Dbxref=Genbank:WP_002210732.1;Name=WP_002210732.1;gbkey=CDS;product=cyd operon protein YbgT;protein_id=WP_002210732.1;transl_table=11
NC_017154.1	RefSeq	gene	1258134	1258421	.	+	.	ID=gene1143;Name=YPD4_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05730
NC_017154.1	Protein Homology	CDS	1258134	1258421	.	+	0	ID=cds1123;Parent=gene1143;Dbxref=Genbank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191945.1;transl_table=11
NC_017154.1	RefSeq	gene	1258553	1258954	.	+	.	ID=gene1144;Name=YPD4_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05735
NC_017154.1	Protein Homology	CDS	1258553	1258954	.	+	0	ID=cds1124;Parent=gene1144;Dbxref=Genbank:WP_002210734.1;Name=WP_002210734.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210734.1;transl_table=11
NC_017154.1	RefSeq	gene	1258954	1259640	.	+	.	ID=gene1145;Name=YPD4_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05740;old_locus_tag=YPD4_0974
NC_017154.1	Protein Homology	CDS	1258954	1259640	.	+	0	ID=cds1125;Parent=gene1145;Dbxref=Genbank:WP_002210735.1;Name=WP_002210735.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210735.1;transl_table=11
NC_017154.1	RefSeq	gene	1259653	1260081	.	+	.	ID=gene1146;Name=YPD4_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05745;old_locus_tag=YPD4_0975
NC_017154.1	Protein Homology	CDS	1259653	1260081	.	+	0	ID=cds1126;Parent=gene1146;Dbxref=Genbank:WP_002210736.1;Name=WP_002210736.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210736.1;transl_table=11
NC_017154.1	RefSeq	gene	1260193	1261359	.	+	.	ID=gene1147;Name=YPD4_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05750;old_locus_tag=YPD4_0976
NC_017154.1	Protein Homology	CDS	1260193	1261359	.	+	0	ID=cds1127;Parent=gene1147;Dbxref=Genbank:WP_002210737.1;Name=WP_002210737.1;gbkey=CDS;product=cell envelope integrity/translocation protein TolA;protein_id=WP_002210737.1;transl_table=11
NC_017154.1	RefSeq	gene	1261479	1262771	.	+	.	ID=gene1148;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=YPD4_RS05755;old_locus_tag=YPD4_0977
NC_017154.1	Protein Homology	CDS	1261479	1262771	.	+	0	ID=cds1128;Parent=gene1148;Dbxref=Genbank:WP_002210738.1;Name=WP_002210738.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=protein TolB;protein_id=WP_002210738.1;transl_table=11
NC_017154.1	RefSeq	gene	1262822	1263328	.	+	.	ID=gene1149;Name=YPD4_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05760;old_locus_tag=YPD4_0978
NC_017154.1	Protein Homology	CDS	1262822	1263328	.	+	0	ID=cds1129;Parent=gene1149;Dbxref=Genbank:WP_002210739.1;Name=WP_002210739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210739.1;transl_table=11
NC_017154.1	RefSeq	gene	1263338	1264147	.	+	.	ID=gene1150;Name=YPD4_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05765;old_locus_tag=YPD4_0979
NC_017154.1	Protein Homology	CDS	1263338	1264147	.	+	0	ID=cds1130;Parent=gene1150;Dbxref=Genbank:WP_002210740.1;Name=WP_002210740.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=tol-pal system protein YbgF;protein_id=WP_002210740.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1264338	1264601	.	+	.	ID=id104;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1264338	1264413	.	+	.	ID=gene1151;Name=YPD4_RS05770;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS05770;old_locus_tag=YPD4_t14
NC_017154.1	tRNAscan-SE	tRNA	1264338	1264413	.	+	.	ID=rna19;Parent=gene1151;anticodon=(pos:1264371..1264373);gbkey=tRNA;product=tRNA-Lys
NC_017154.1	tRNAscan-SE	exon	1264338	1264413	.	+	.	ID=id105;Parent=rna19;anticodon=(pos:1264371..1264373);gbkey=tRNA;product=tRNA-Lys
NC_017154.1	RefSeq	gene	1264441	1264516	.	+	.	ID=gene1152;Name=YPD4_RS05775;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS05775;old_locus_tag=YPD4_t15
NC_017154.1	tRNAscan-SE	tRNA	1264441	1264516	.	+	.	ID=rna20;Parent=gene1152;anticodon=(pos:1264474..1264476);gbkey=tRNA;product=tRNA-Lys
NC_017154.1	tRNAscan-SE	exon	1264441	1264516	.	+	.	ID=id106;Parent=rna20;anticodon=(pos:1264474..1264476);gbkey=tRNA;product=tRNA-Lys
NC_017154.1	RefSeq	gene	1264664	1264906	.	-	.	ID=gene1153;Name=YPD4_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05780
NC_017154.1	Protein Homology	CDS	1264664	1264906	.	-	0	ID=cds1131;Parent=gene1153;Dbxref=Genbank:WP_002217022.1;Name=WP_002217022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217022.1;transl_table=11
NC_017154.1	RefSeq	gene	1264983	1266044	.	+	.	ID=gene1154;Name=YPD4_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05785;old_locus_tag=YPD4_0980
NC_017154.1	Protein Homology	CDS	1264983	1266044	.	+	0	ID=cds1132;Parent=gene1154;Dbxref=Genbank:WP_002210741.1;Name=WP_002210741.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthase A;protein_id=WP_002210741.1;transl_table=11
NC_017154.1	RefSeq	gene	1266166	1266891	.	+	.	ID=gene1155;Name=YPD4_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05790;old_locus_tag=YPD4_0981
NC_017154.1	Protein Homology	CDS	1266166	1266891	.	+	0	ID=cds1133;Parent=gene1155;Dbxref=Genbank:WP_002210742.1;Name=WP_002210742.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;product=nicotinamide riboside transporter PnuC;protein_id=WP_002210742.1;transl_table=11
NC_017154.1	RefSeq	gene	1267006	1267946	.	-	.	ID=gene1156;Name=YPD4_RS05795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS05795;pseudo=true
NC_017154.1	Protein Homology	CDS	1267006	1267946	.	-	0	ID=cds1134;Parent=gene1156;Note=involved in zinc efflux across the cytoplasmic membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;product=zinc transporter ZitB;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1268395	1269412	.	+	.	ID=gene1157;Name=YPD4_RS05800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS05800;old_locus_tag=YPD4_0983;pseudo=true
NC_017154.1	Protein Homology	CDS	1268395	1269412	.	+	0	ID=cds1135;Parent=gene1157;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	1269353	1271312	.	+	.	ID=id107;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1269422	1270201	.	-	.	ID=gene1158;Name=YPD4_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05805;old_locus_tag=YPD4_0984
NC_017154.1	Protein Homology	CDS	1269422	1270201	.	-	0	ID=cds1136;Parent=gene1158;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	1270201	1271222	.	-	.	ID=gene1159;Name=YPD4_RS05810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS05810;pseudo=true
NC_017154.1	Protein Homology	CDS	1270201	1271222	.	-	0	ID=cds1137;Parent=gene1159;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1271281	1271406	.	+	.	ID=gene1160;Name=YPD4_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05815
NC_017154.1	Protein Homology	CDS	1271281	1271406	.	+	0	ID=cds1138;Parent=gene1160;Dbxref=Genbank:WP_002210745.1;Name=WP_002210745.1;gbkey=CDS;product=3-deoxy-D-arabinoheptulosonate-7-phosphate synthase;protein_id=WP_002210745.1;transl_table=11
NC_017154.1	RefSeq	gene	1271588	1272340	.	-	.	ID=gene1161;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=YPD4_RS05820;old_locus_tag=YPD4_0986
NC_017154.1	Protein Homology	CDS	1271588	1272340	.	-	0	ID=cds1139;Parent=gene1161;Dbxref=Genbank:WP_002210746.1;Name=WP_002210746.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002210746.1;transl_table=11
NC_017154.1	RefSeq	gene	1272687	1273022	.	-	.	ID=gene1162;Name=YPD4_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05825;old_locus_tag=YPD4_0987
NC_017154.1	Protein Homology	CDS	1272687	1273022	.	-	0	ID=cds1140;Parent=gene1162;Dbxref=Genbank:WP_002210747.1;Name=WP_002210747.1;gbkey=CDS;product=phosphate-starvation-inducible protein PsiF;protein_id=WP_002210747.1;transl_table=11
NC_017154.1	RefSeq	gene	1273315	1274211	.	-	.	ID=gene1163;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=YPD4_RS05830;old_locus_tag=YPD4_0988
NC_017154.1	Protein Homology	CDS	1273315	1274211	.	-	0	ID=cds1141;Parent=gene1163;Dbxref=Genbank:WP_002216812.1;Name=WP_002216812.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;product=galactose-1-epimerase;protein_id=WP_002216812.1;transl_table=11
NC_017154.1	RefSeq	gene	1274232	1274384	.	-	.	ID=gene1164;Name=YPD4_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05835
NC_017154.1	Protein Homology	CDS	1274232	1274384	.	-	0	ID=cds1142;Parent=gene1164;Dbxref=Genbank:WP_002216814.1;Name=WP_002216814.1;gbkey=CDS;product=aldose 1-epimerase;protein_id=WP_002216814.1;transl_table=11
NC_017154.1	RefSeq	gene	1274378	1275529	.	-	.	ID=gene1165;Name=YPD4_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05840;old_locus_tag=YPD4_0989
NC_017154.1	Protein Homology	CDS	1274378	1275529	.	-	0	ID=cds1143;Parent=gene1165;Dbxref=Genbank:WP_002210748.1;Name=WP_002210748.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;product=galactokinase;protein_id=WP_002210748.1;transl_table=11
NC_017154.1	RefSeq	gene	1275526	1276578	.	-	.	ID=gene1166;Name=YPD4_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05845;old_locus_tag=YPD4_0990
NC_017154.1	Protein Homology	CDS	1275526	1276578	.	-	0	ID=cds1144;Parent=gene1166;Dbxref=Genbank:WP_002210749.1;Name=WP_002210749.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002210749.1;transl_table=11
NC_017154.1	RefSeq	gene	1276588	1277604	.	-	.	ID=gene1167;Name=YPD4_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05850;old_locus_tag=YPD4_0991
NC_017154.1	Protein Homology	CDS	1276588	1277604	.	-	0	ID=cds1145;Parent=gene1167;Dbxref=Genbank:WP_002210750.1;Name=WP_002210750.1;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=WP_002210750.1;transl_table=11
NC_017154.1	RefSeq	gene	1277964	1278782	.	-	.	ID=gene1168;Name=YPD4_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05855;old_locus_tag=YPD4_0992
NC_017154.1	Protein Homology	CDS	1277964	1278782	.	-	0	ID=cds1146;Parent=gene1168;Dbxref=Genbank:WP_002210751.1;Name=WP_002210751.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002210751.1;transl_table=11
NC_017154.1	RefSeq	gene	1278837	1278965	.	-	.	ID=gene1169;Name=YPD4_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05860
NC_017154.1	Protein Homology	CDS	1278837	1278965	.	-	0	ID=cds1147;Parent=gene1169;Dbxref=Genbank:WP_002210752.1;Name=WP_002210752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210752.1;transl_table=11
NC_017154.1	RefSeq	gene	1278999	1280489	.	-	.	ID=gene1170;Name=YPD4_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05865;old_locus_tag=YPD4_0993
NC_017154.1	Protein Homology	CDS	1278999	1280489	.	-	0	ID=cds1148;Parent=gene1170;Dbxref=Genbank:WP_002210753.1;Name=WP_002210753.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_002210753.1;transl_table=11
NC_017154.1	RefSeq	gene	1280599	1281390	.	-	.	ID=gene1171;Name=YPD4_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05870;old_locus_tag=YPD4_0994
NC_017154.1	Protein Homology	CDS	1280599	1281390	.	-	0	ID=cds1149;Parent=gene1171;Dbxref=Genbank:WP_002210754.1;Name=WP_002210754.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;product=transcriptional regulator ModE;protein_id=WP_002210754.1;transl_table=11
NC_017154.1	RefSeq	gene	1281690	1281842	.	+	.	ID=gene1172;Name=YPD4_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05875
NC_017154.1	Protein Homology	CDS	1281690	1281842	.	+	0	ID=cds1150;Parent=gene1172;Dbxref=Genbank:WP_002217291.1;Name=WP_002217291.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217291.1;transl_table=11
NC_017154.1	RefSeq	gene	1282077	1282856	.	+	.	ID=gene1173;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=YPD4_RS05880;old_locus_tag=YPD4_0995
NC_017154.1	Protein Homology	CDS	1282077	1282856	.	+	0	ID=cds1151;Parent=gene1173;Dbxref=Genbank:WP_002210756.1;Name=WP_002210756.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11
NC_017154.1	RefSeq	gene	1282856	1283551	.	+	.	ID=gene1174;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=YPD4_RS05885;old_locus_tag=YPD4_0996
NC_017154.1	Protein Homology	CDS	1282856	1283551	.	+	0	ID=cds1152;Parent=gene1174;Dbxref=Genbank:WP_002210757.1;Name=WP_002210757.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=WP_002210757.1;transl_table=11
NC_017154.1	RefSeq	gene	1283545	1284624	.	+	.	ID=gene1175;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=YPD4_RS05890;old_locus_tag=YPD4_0997
NC_017154.1	Protein Homology	CDS	1283545	1284624	.	+	0	ID=cds1153;Parent=gene1175;Dbxref=Genbank:WP_002210758.1;Name=WP_002210758.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdenum import ATP-binding protein ModC;protein_id=WP_002210758.1;transl_table=11
NC_017154.1	RefSeq	gene	1284680	1285501	.	-	.	ID=gene1176;Name=YPD4_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05895;old_locus_tag=YPD4_0998
NC_017154.1	Protein Homology	CDS	1284680	1285501	.	-	0	ID=cds1154;Parent=gene1176;Dbxref=Genbank:WP_002210759.1;Name=WP_002210759.1;gbkey=CDS;product=pyridoxal phosphate phosphatase;protein_id=WP_002210759.1;transl_table=11
NC_017154.1	RefSeq	gene	1285792	1286796	.	+	.	ID=gene1177;Name=YPD4_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05900;old_locus_tag=YPD4_0999
NC_017154.1	Protein Homology	CDS	1285792	1286796	.	+	0	ID=cds1155;Parent=gene1177;Dbxref=Genbank:WP_002210760.1;Name=WP_002210760.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_002210760.1;transl_table=11
NC_017154.1	RefSeq	gene	1286981	1288262	.	-	.	ID=gene1178;Name=YPD4_RS05905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS05905;pseudo=true
NC_017154.1	Protein Homology	CDS	1286981	1288262	.	-	0	ID=cds1156;Parent=gene1178;exception=annotated by transcript or proteomic data;gbkey=CDS;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1288361	1289398	.	+	.	ID=gene1179;Name=YPD4_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05910;old_locus_tag=YPD4_1002
NC_017154.1	Protein Homology	CDS	1288361	1289398	.	+	0	ID=cds1157;Parent=gene1179;Dbxref=Genbank:WP_002210762.1;Name=WP_002210762.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_002210762.1;transl_table=11
NC_017154.1	RefSeq	gene	1289398	1290549	.	+	.	ID=gene1180;Name=YPD4_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05915;old_locus_tag=YPD4_1003
NC_017154.1	Protein Homology	CDS	1289398	1290549	.	+	0	ID=cds1158;Parent=gene1180;Dbxref=Genbank:WP_002210763.1;Name=WP_002210763.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=WP_002210763.1;transl_table=11
NC_017154.1	RefSeq	gene	1290533	1291336	.	+	.	ID=gene1181;Name=YPD4_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05920;old_locus_tag=YPD4_1004
NC_017154.1	Protein Homology	CDS	1290533	1291336	.	+	0	ID=cds1159;Parent=gene1181;Dbxref=Genbank:WP_002210764.1;Name=WP_002210764.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=WP_002210764.1;transl_table=11
NC_017154.1	RefSeq	gene	1291329	1292051	.	+	.	ID=gene1182;Name=YPD4_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05925;old_locus_tag=YPD4_1005
NC_017154.1	Protein Homology	CDS	1291329	1292051	.	+	0	ID=cds1160;Parent=gene1182;Dbxref=Genbank:WP_002216554.1;Name=WP_002216554.1;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002216554.1;transl_table=11
NC_017154.1	RefSeq	gene	1292203	1292913	.	-	.	ID=gene1183;Name=YPD4_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05930;old_locus_tag=YPD4_1006
NC_017154.1	Protein Homology	CDS	1292203	1292913	.	-	0	ID=cds1161;Parent=gene1183;Dbxref=Genbank:WP_002210766.1;Name=WP_002210766.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210766.1;transl_table=11
NC_017154.1	RefSeq	gene	1294003	1296018	.	+	.	ID=gene1184;Name=YPD4_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05935;old_locus_tag=YPD4_1007
NC_017154.1	Protein Homology	CDS	1294003	1296018	.	+	0	ID=cds1162;Parent=gene1184;Dbxref=Genbank:WP_002210767.1;Name=WP_002210767.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=UvrABC system protein B;protein_id=WP_002210767.1;transl_table=11
NC_017154.1	RefSeq	gene	1296310	1296555	.	+	.	ID=gene1185;Name=YPD4_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05940
NC_017154.1	Protein Homology	CDS	1296310	1296555	.	+	0	ID=cds1163;Parent=gene1185;Dbxref=Genbank:WP_002210768.1;Name=WP_002210768.1;gbkey=CDS;product=transporter;protein_id=WP_002210768.1;transl_table=11
NC_017154.1	RefSeq	gene	1296686	1297609	.	-	.	ID=gene1186;Name=YPD4_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05945;old_locus_tag=YPD4_1008
NC_017154.1	Protein Homology	CDS	1296686	1297609	.	-	0	ID=cds1164;Parent=gene1186;Dbxref=Genbank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210769.1;transl_table=11
NC_017154.1	RefSeq	gene	1297743	1297889	.	-	.	ID=gene1187;Name=YPD4_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05950
NC_017154.1	Protein Homology	CDS	1297743	1297889	.	-	0	ID=cds1165;Parent=gene1187;Dbxref=Genbank:WP_002210770.1;Name=WP_002210770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210770.1;transl_table=11
NC_017154.1	RefSeq	gene	1298141	1299121	.	+	.	ID=gene1188;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=YPD4_RS05955;old_locus_tag=YPD4_1009
NC_017154.1	Protein Homology	CDS	1298141	1299121	.	+	0	ID=cds1166;Parent=gene1188;Dbxref=Genbank:WP_002210771.1;Name=WP_002210771.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin monophosphate synthase;protein_id=WP_002210771.1;transl_table=11
NC_017154.1	RefSeq	gene	1299222	1299701	.	+	.	ID=gene1189;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=YPD4_RS05960;old_locus_tag=YPD4_1010
NC_017154.1	Protein Homology	CDS	1299222	1299701	.	+	0	ID=cds1167;Parent=gene1189;Dbxref=Genbank:WP_002210772.1;Name=WP_002210772.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=WP_002210772.1;transl_table=11
NC_017154.1	RefSeq	gene	1299698	1299943	.	+	.	ID=gene1190;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=YPD4_RS05965
NC_017154.1	Protein Homology	CDS	1299698	1299943	.	+	0	ID=cds1168;Parent=gene1190;Dbxref=Genbank:WP_002210773.1;Name=WP_002210773.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=WP_002210773.1;transl_table=11
NC_017154.1	RefSeq	gene	1299946	1300398	.	+	.	ID=gene1191;Name=YPD4_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05970;old_locus_tag=YPD4_1011
NC_017154.1	Protein Homology	CDS	1299946	1300398	.	+	0	ID=cds1169;Parent=gene1191;Dbxref=Genbank:WP_002210774.1;Name=WP_002210774.1;gbkey=CDS;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=WP_002210774.1;transl_table=11
NC_017154.1	RefSeq	gene	1300541	1301251	.	+	.	ID=gene1192;Name=YPD4_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05975;old_locus_tag=YPD4_1012
NC_017154.1	Protein Homology	CDS	1300541	1301251	.	+	0	ID=cds1170;Parent=gene1192;Dbxref=Genbank:WP_002210775.1;Name=WP_002210775.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210775.1;transl_table=11
NC_017154.1	RefSeq	gene	1301325	1301495	.	+	.	ID=gene1193;Name=YPD4_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05980
NC_017154.1	Protein Homology	CDS	1301325	1301495	.	+	0	ID=cds1171;Parent=gene1193;Dbxref=Genbank:WP_025470755.1;Name=WP_025470755.1;gbkey=CDS;product=transposase;protein_id=WP_025470755.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1301332	1302055	.	+	.	ID=id108;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1301485	1301943	.	+	.	ID=gene1194;Name=YPD4_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05985;old_locus_tag=YPD4_1013
NC_017154.1	Protein Homology	CDS	1301485	1301943	.	+	0	ID=cds1172;Parent=gene1194;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	1302172	1303875	.	-	.	ID=gene1195;Name=YPD4_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05990;old_locus_tag=YPD4_1014
NC_017154.1	Protein Homology	CDS	1302172	1303875	.	-	0	ID=cds1173;Parent=gene1195;Dbxref=Genbank:WP_002220180.1;Name=WP_002220180.1;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;gbkey=CDS;product=oxygen-dependent choline dehydrogenase;protein_id=WP_002220180.1;transl_table=11
NC_017154.1	RefSeq	gene	1303898	1305370	.	-	.	ID=gene1196;Name=YPD4_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS05995;old_locus_tag=YPD4_1015
NC_017154.1	Protein Homology	CDS	1303898	1305370	.	-	0	ID=cds1174;Parent=gene1196;Dbxref=Genbank:WP_002218281.1;Name=WP_002218281.1;gbkey=CDS;product=NAD/NADP-dependent betaine aldehyde dehydrogenase;protein_id=WP_002218281.1;transl_table=11
NC_017154.1	RefSeq	gene	1305428	1306024	.	-	.	ID=gene1197;Name=YPD4_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06000;old_locus_tag=YPD4_1016
NC_017154.1	Protein Homology	CDS	1305428	1306024	.	-	0	ID=cds1175;Parent=gene1197;Dbxref=Genbank:WP_002218278.1;Name=WP_002218278.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002218278.1;transl_table=11
NC_017154.1	RefSeq	gene	1306389	1308437	.	+	.	ID=gene1198;Name=YPD4_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06005;old_locus_tag=YPD4_1017
NC_017154.1	Protein Homology	CDS	1306389	1308437	.	+	0	ID=cds1176;Parent=gene1198;Dbxref=Genbank:WP_002228035.1;Name=WP_002228035.1;Note=proton-motive-force-driven choline transporter;gbkey=CDS;product=choline transporter BetT;protein_id=WP_002228035.1;transl_table=11
NC_017154.1	RefSeq	gene	1308669	1309562	.	+	.	ID=gene1199;Name=YPD4_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06010;old_locus_tag=YPD4_1018
NC_017154.1	Protein Homology	CDS	1308669	1309562	.	+	0	ID=cds1177;Parent=gene1199;Dbxref=Genbank:WP_002214199.1;Name=WP_002214199.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214199.1;transl_table=11
NC_017154.1	RefSeq	gene	1309600	1310448	.	-	.	ID=gene1200;Name=YPD4_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06015;old_locus_tag=YPD4_1019
NC_017154.1	Protein Homology	CDS	1309600	1310448	.	-	0	ID=cds1178;Parent=gene1200;Dbxref=Genbank:WP_002214197.1;Name=WP_002214197.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002214197.1;transl_table=11
NC_017154.1	RefSeq	gene	1310794	1311657	.	+	.	ID=gene1201;Name=YPD4_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06020;old_locus_tag=YPD4_1020
NC_017154.1	Protein Homology	CDS	1310794	1311657	.	+	0	ID=cds1179;Parent=gene1201;Dbxref=Genbank:WP_002214195.1;Name=WP_002214195.1;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=WP_002214195.1;transl_table=11
NC_017154.1	RefSeq	gene	1311796	1312440	.	+	.	ID=gene1202;Name=YPD4_RS06025;end_range=1312440,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS06025;old_locus_tag=YPD4_1021;partial=true;pseudo=true
NC_017154.1	Protein Homology	CDS	1311796	1312440	.	+	0	ID=cds1180;Parent=gene1202;end_range=1312440,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	1312435	1313156	.	+	.	ID=id109;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1312586	1313044	.	+	.	ID=gene1203;Name=YPD4_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06030;old_locus_tag=YPD4_1022
NC_017154.1	Protein Homology	CDS	1312586	1313044	.	+	0	ID=cds1181;Parent=gene1203;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	1313145	1313762	.	+	.	ID=gene1204;Name=YPD4_RS06035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS06035;old_locus_tag=YPD4_1023;partial=true;pseudo=true;start_range=.,1313145
NC_017154.1	Protein Homology	CDS	1313145	1313762	.	+	0	ID=cds1182;Parent=gene1204;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;start_range=.,1313145;transl_table=11
NC_017154.1	RefSeq	gene	1313850	1314323	.	-	.	ID=gene1205;Name=YPD4_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06040;old_locus_tag=YPD4_1024
NC_017154.1	Protein Homology	CDS	1313850	1314323	.	-	0	ID=cds1183;Parent=gene1205;Dbxref=Genbank:WP_002220173.1;Name=WP_002220173.1;gbkey=CDS;product=zinc resistance protein;protein_id=WP_002220173.1;transl_table=11
NC_017154.1	RefSeq	gene	1314681	1316495	.	+	.	ID=gene1206;Name=YPD4_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06045;old_locus_tag=YPD4_1025
NC_017154.1	Protein Homology	CDS	1314681	1316495	.	+	0	ID=cds1184;Parent=gene1206;Dbxref=Genbank:WP_002220171.1;Name=WP_002220171.1;gbkey=CDS;product=sensor protein ZraS;protein_id=WP_002220171.1;transl_table=11
NC_017154.1	RefSeq	gene	1316482	1317846	.	+	.	ID=gene1207;Name=YPD4_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06050;old_locus_tag=YPD4_1026
NC_017154.1	Protein Homology	CDS	1316482	1317846	.	+	0	ID=cds1185;Parent=gene1207;Dbxref=Genbank:WP_002220170.1;Name=WP_002220170.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=WP_002220170.1;transl_table=11
NC_017154.1	RefSeq	gene	1318194	1319303	.	+	.	ID=gene1208;Name=YPD4_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06055;old_locus_tag=YPD4_1027
NC_017154.1	Protein Homology	CDS	1318194	1319303	.	+	0	ID=cds1186;Parent=gene1208;Dbxref=Genbank:WP_002220169.1;Name=WP_002220169.1;gbkey=CDS;product=NADH:flavin oxidoreductase;protein_id=WP_002220169.1;transl_table=11
NC_017154.1	RefSeq	gene	1319304	1320215	.	-	.	ID=gene1209;Name=YPD4_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06060;old_locus_tag=YPD4_1028
NC_017154.1	Protein Homology	CDS	1319304	1320215	.	-	0	ID=cds1187;Parent=gene1209;Dbxref=Genbank:WP_002220168.1;Name=WP_002220168.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220168.1;transl_table=11
NC_017154.1	RefSeq	gene	1320770	1320997	.	+	.	ID=gene1210;Name=YPD4_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06065
NC_017154.1	Protein Homology	CDS	1320770	1320997	.	+	0	ID=cds1188;Parent=gene1210;Dbxref=Genbank:WP_002220165.1;Name=WP_002220165.1;gbkey=CDS;product=N5%2CN10-methylene tetrahydromethanopterin reductase;protein_id=WP_002220165.1;transl_table=11
NC_017154.1	RefSeq	gene	1321008	1321334	.	+	.	ID=gene1211;Name=YPD4_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06070;old_locus_tag=YPD4_1029
NC_017154.1	Protein Homology	CDS	1321008	1321334	.	+	0	ID=cds1189;Parent=gene1211;Dbxref=Genbank:WP_002220163.1;Name=WP_002220163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220163.1;transl_table=11
NC_017154.1	RefSeq	gene	1321373	1322479	.	-	.	ID=gene1212;Name=YPD4_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06075;old_locus_tag=YPD4_1030
NC_017154.1	Protein Homology	CDS	1321373	1322479	.	-	0	ID=cds1190;Parent=gene1212;Dbxref=Genbank:WP_002220162.1;Name=WP_002220162.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220162.1;transl_table=11
NC_017154.1	RefSeq	gene	1322492	1323667	.	-	.	ID=gene1213;Name=YPD4_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06080;old_locus_tag=YPD4_1031
NC_017154.1	Protein Homology	CDS	1322492	1323667	.	-	0	ID=cds1191;Parent=gene1213;Dbxref=Genbank:WP_002220159.1;Name=WP_002220159.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220159.1;transl_table=11
NC_017154.1	RefSeq	gene	1323672	1325414	.	-	.	ID=gene1214;Name=YPD4_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06085;old_locus_tag=YPD4_1032
NC_017154.1	Protein Homology	CDS	1323672	1325414	.	-	0	ID=cds1192;Parent=gene1214;Dbxref=Genbank:WP_002220158.1;Name=WP_002220158.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002220158.1;transl_table=11
NC_017154.1	RefSeq	gene	1325428	1326414	.	-	.	ID=gene1215;Name=YPD4_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06090;old_locus_tag=YPD4_1033
NC_017154.1	Protein Homology	CDS	1325428	1326414	.	-	0	ID=cds1193;Parent=gene1215;Dbxref=Genbank:WP_002220156.1;Name=WP_002220156.1;gbkey=CDS;product=transporter;protein_id=WP_002220156.1;transl_table=11
NC_017154.1	RefSeq	gene	1326466	1327176	.	-	.	ID=gene1216;Name=YPD4_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06095;old_locus_tag=YPD4_1034
NC_017154.1	Protein Homology	CDS	1326466	1327176	.	-	0	ID=cds1194;Parent=gene1216;Dbxref=Genbank:WP_002220154.1;Name=WP_002220154.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220154.1;transl_table=11
NC_017154.1	RefSeq	gene	1327567	1328922	.	+	.	ID=gene1217;Name=YPD4_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06100;old_locus_tag=YPD4_1035
NC_017154.1	Protein Homology	CDS	1327567	1328922	.	+	0	ID=cds1195;Parent=gene1217;Dbxref=Genbank:WP_002220152.1;Name=WP_002220152.1;Note=this helicase is not essential cell growth;gbkey=CDS;product=RNA helicase;protein_id=WP_002220152.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1327929	1328984	.	+	.	ID=id110;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1329052	1329318	.	+	.	ID=gene1218;Name=YPD4_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06105
NC_017154.1	Protein Homology	CDS	1329052	1329318	.	+	0	ID=cds1196;Parent=gene1218;Dbxref=Genbank:WP_002228622.1;Name=WP_002228622.1;gbkey=CDS;product=transposase;protein_id=WP_002228622.1;transl_table=11
NC_017154.1	RefSeq	gene	1330136	1330330	.	+	.	ID=gene1219;Name=YPD4_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06110
NC_017154.1	Protein Homology	CDS	1330136	1330330	.	+	0	ID=cds1197;Parent=gene1219;Dbxref=Genbank:WP_002228620.1;Name=WP_002228620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228620.1;transl_table=11
NC_017154.1	RefSeq	gene	1330364	1330690	.	+	.	ID=gene1220;Name=YPD4_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06115
NC_017154.1	Protein Homology	CDS	1330364	1330690	.	+	0	ID=cds1198;Parent=gene1220;Dbxref=Genbank:WP_016256670.1;Name=WP_016256670.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256670.1;transl_table=11
NC_017154.1	RefSeq	gene	1330831	1331067	.	+	.	ID=gene1221;Name=YPD4_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22435
NC_017154.1	Protein Homology	CDS	1330831	1331067	.	+	0	ID=cds1199;Parent=gene1221;Dbxref=Genbank:WP_002228617.1;Name=WP_002228617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228617.1;transl_table=11
NC_017154.1	RefSeq	gene	1331151	1331465	.	+	.	ID=gene1222;Name=YPD4_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06125
NC_017154.1	Protein Homology	CDS	1331151	1331465	.	+	0	ID=cds1200;Parent=gene1222;Dbxref=Genbank:WP_002223532.1;Name=WP_002223532.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223532.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1331566	1332886	.	+	.	ID=id111;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1331640	1332847	.	+	.	ID=gene1223;Name=YPD4_RS06130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS06130;pseudo=true
NC_017154.1	Protein Homology	CDS	1331640	1332847	.	+	0	ID=cds1201;Parent=gene1223;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1332939	1333529	.	+	.	ID=gene1224;Name=YPD4_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06135;old_locus_tag=YPD4_1040
NC_017154.1	Protein Homology	CDS	1332939	1333529	.	+	0	ID=cds1202;Parent=gene1224;Dbxref=Genbank:WP_002228614.1;Name=WP_002228614.1;gbkey=CDS;product=transposase;protein_id=WP_002228614.1;transl_table=11
NC_017154.1	RefSeq	gene	1333447	1334448	.	+	.	ID=gene1225;Name=YPD4_RS06140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS06140;old_locus_tag=YPD4_1041;partial=true;pseudo=true;start_range=.,1333447
NC_017154.1	Protein Homology	CDS	1333447	1334448	.	+	0	ID=cds1203;Parent=gene1225;Note=this helicase is not essential cell growth;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ATP-dependent RNA helicase RhlE;pseudo=true;start_range=.,1333447;transl_table=11
NC_017154.1	RefSeq	repeat_region	1333455	1335229	.	+	.	ID=id112;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1334514	1334669	.	+	.	ID=gene1226;Name=YPD4_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06145
NC_017154.1	Protein Homology	CDS	1334514	1334669	.	+	0	ID=cds1204;Parent=gene1226;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	1334659	1335117	.	+	.	ID=gene1227;Name=YPD4_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06150;old_locus_tag=YPD4_1042
NC_017154.1	Protein Homology	CDS	1334659	1335117	.	+	0	ID=cds1205;Parent=gene1227;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	1335532	1336461	.	+	.	ID=gene1228;Name=YPD4_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06155;old_locus_tag=YPD4_1043
NC_017154.1	Protein Homology	CDS	1335532	1336461	.	+	0	ID=cds1206;Parent=gene1228;Dbxref=Genbank:WP_002210776.1;Name=WP_002210776.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210776.1;transl_table=11
NC_017154.1	RefSeq	gene	1336761	1337699	.	+	.	ID=gene1229;Name=YPD4_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06160;old_locus_tag=YPD4_1044
NC_017154.1	Protein Homology	CDS	1336761	1337699	.	+	0	ID=cds1207;Parent=gene1229;Dbxref=Genbank:WP_002228612.1;Name=WP_002228612.1;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=WP_002228612.1;transl_table=11
NC_017154.1	RefSeq	gene	1337773	1337952	.	-	.	ID=gene1230;Name=YPD4_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06165
NC_017154.1	Protein Homology	CDS	1337773	1337952	.	-	0	ID=cds1208;Parent=gene1230;Dbxref=Genbank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210778.1;transl_table=11
NC_017154.1	RefSeq	gene	1338291	1339226	.	+	.	ID=gene1231;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=YPD4_RS06170;old_locus_tag=YPD4_1045
NC_017154.1	Protein Homology	CDS	1338291	1339226	.	+	0	ID=cds1209;Parent=gene1231;Dbxref=Genbank:WP_002210780.1;Name=WP_002210780.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_002210780.1;transl_table=11
NC_017154.1	RefSeq	gene	1339347	1341059	.	-	.	ID=gene1232;Name=YPD4_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06175;old_locus_tag=YPD4_1046
NC_017154.1	Protein Homology	CDS	1339347	1341059	.	-	0	ID=cds1210;Parent=gene1232;Dbxref=Genbank:WP_002210781.1;Name=WP_002210781.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210781.1;transl_table=11
NC_017154.1	RefSeq	gene	1341269	1341808	.	+	.	ID=gene1233;Name=YPD4_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06180;old_locus_tag=YPD4_1047
NC_017154.1	Protein Homology	CDS	1341269	1341808	.	+	0	ID=cds1211;Parent=gene1233;Dbxref=Genbank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;product=adenylate cyclase;protein_id=WP_002210782.1;transl_table=11
NC_017154.1	RefSeq	gene	1341834	1342175	.	-	.	ID=gene1234;Name=YPD4_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06185;old_locus_tag=YPD4_1048
NC_017154.1	Protein Homology	CDS	1341834	1342175	.	-	0	ID=cds1212;Parent=gene1234;Dbxref=Genbank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214185.1;transl_table=11
NC_017154.1	RefSeq	gene	1342488	1343591	.	+	.	ID=gene1235;Name=YPD4_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06190;old_locus_tag=YPD4_1049
NC_017154.1	Protein Homology	CDS	1342488	1343591	.	+	0	ID=cds1213;Parent=gene1235;Dbxref=Genbank:WP_002210785.1;Name=WP_002210785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210785.1;transl_table=11
NC_017154.1	RefSeq	gene	1343776	1344024	.	+	.	ID=gene1236;Name=YPD4_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06195
NC_017154.1	Protein Homology	CDS	1343776	1344024	.	+	0	ID=cds1214;Parent=gene1236;Dbxref=Genbank:WP_002210786.1;Name=WP_002210786.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210786.1;transl_table=11
NC_017154.1	RefSeq	gene	1344232	1345068	.	+	.	ID=gene1237;Name=YPD4_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06200;old_locus_tag=YPD4_1050
NC_017154.1	Protein Homology	CDS	1344232	1345068	.	+	0	ID=cds1215;Parent=gene1237;Dbxref=Genbank:WP_002210787.1;Name=WP_002210787.1;gbkey=CDS;product=phosphonates import ATP-binding protein PhnC;protein_id=WP_002210787.1;transl_table=11
NC_017154.1	RefSeq	gene	1345105	1346034	.	+	.	ID=gene1238;Name=YPD4_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06205;old_locus_tag=YPD4_1051
NC_017154.1	Protein Homology	CDS	1345105	1346034	.	+	0	ID=cds1216;Parent=gene1238;Dbxref=Genbank:WP_002210788.1;Name=WP_002210788.1;gbkey=CDS;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_002210788.1;transl_table=11
NC_017154.1	RefSeq	gene	1346137	1346997	.	+	.	ID=gene1239;Name=YPD4_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06210;old_locus_tag=YPD4_1052
NC_017154.1	Protein Homology	CDS	1346137	1346997	.	+	0	ID=cds1217;Parent=gene1239;Dbxref=Genbank:WP_002210789.1;Name=WP_002210789.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210789.1;transl_table=11
NC_017154.1	RefSeq	gene	1347000	1347881	.	+	.	ID=gene1240;Name=YPD4_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06215;old_locus_tag=YPD4_1053
NC_017154.1	Protein Homology	CDS	1347000	1347881	.	+	0	ID=cds1218;Parent=gene1240;Dbxref=Genbank:WP_002210790.1;Name=WP_002210790.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210790.1;transl_table=11
NC_017154.1	RefSeq	gene	1348127	1348600	.	+	.	ID=gene1241;Name=YPD4_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06220;old_locus_tag=YPD4_1054
NC_017154.1	Protein Homology	CDS	1348127	1348600	.	+	0	ID=cds1219;Parent=gene1241;Dbxref=Genbank:WP_002210791.1;Name=WP_002210791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210791.1;transl_table=11
NC_017154.1	RefSeq	gene	1349035	1350303	.	+	.	ID=gene1242;Name=YPD4_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06225;old_locus_tag=YPD4_1055
NC_017154.1	Protein Homology	CDS	1349035	1350303	.	+	0	ID=cds1220;Parent=gene1242;Dbxref=Genbank:WP_002210792.1;Name=WP_002210792.1;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_002210792.1;transl_table=11
NC_017154.1	RefSeq	gene	1350427	1352028	.	+	.	ID=gene1243;Name=YPD4_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06230;old_locus_tag=YPD4_1056
NC_017154.1	Protein Homology	CDS	1350427	1352028	.	+	0	ID=cds1221;Parent=gene1243;Dbxref=Genbank:WP_002210793.1;Name=WP_002210793.1;gbkey=CDS;product=urea ABC transporter permease;protein_id=WP_002210793.1;transl_table=11
NC_017154.1	RefSeq	gene	1352028	1353104	.	+	.	ID=gene1244;Name=YPD4_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06235;old_locus_tag=YPD4_1057
NC_017154.1	Protein Homology	CDS	1352028	1353104	.	+	0	ID=cds1222;Parent=gene1244;Dbxref=Genbank:WP_002210794.1;Name=WP_002210794.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002210794.1;transl_table=11
NC_017154.1	RefSeq	gene	1353101	1353937	.	+	.	ID=gene1245;Name=YPD4_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06240;old_locus_tag=YPD4_1058
NC_017154.1	Protein Homology	CDS	1353101	1353937	.	+	0	ID=cds1223;Parent=gene1245;Dbxref=Genbank:WP_002210795.1;Name=WP_002210795.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210795.1;transl_table=11
NC_017154.1	RefSeq	gene	1354031	1354729	.	+	.	ID=gene1246;Name=YPD4_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06245;old_locus_tag=YPD4_1059
NC_017154.1	Protein Homology	CDS	1354031	1354729	.	+	0	ID=cds1224;Parent=gene1246;Dbxref=Genbank:WP_002223523.1;Name=WP_002223523.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002223523.1;transl_table=11
NC_017154.1	RefSeq	gene	1354844	1355701	.	+	.	ID=gene1247;Name=YPD4_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06250;old_locus_tag=YPD4_1060
NC_017154.1	Protein Homology	CDS	1354844	1355701	.	+	0	ID=cds1225;Parent=gene1247;Dbxref=Genbank:WP_002210797.1;Name=WP_002210797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210797.1;transl_table=11
NC_017154.1	RefSeq	gene	1355725	1357140	.	+	.	ID=gene1248;Name=YPD4_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06255;old_locus_tag=YPD4_1061
NC_017154.1	Protein Homology	CDS	1355725	1357140	.	+	0	ID=cds1226;Parent=gene1248;Dbxref=Genbank:WP_002210798.1;Name=WP_002210798.1;gbkey=CDS;product=amino acid decarboxylase;protein_id=WP_002210798.1;transl_table=11
NC_017154.1	RefSeq	gene	1357360	1358214	.	-	.	ID=gene1249;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=YPD4_RS06260;old_locus_tag=YPD4_1062
NC_017154.1	Protein Homology	CDS	1357360	1358214	.	-	0	ID=cds1227;Parent=gene1249;Dbxref=Genbank:WP_002210799.1;Name=WP_002210799.1;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_002210799.1;transl_table=11
NC_017154.1	RefSeq	gene	1358950	1359417	.	+	.	ID=gene1250;Name=YPD4_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06265;old_locus_tag=YPD4_1063
NC_017154.1	Protein Homology	CDS	1358950	1359417	.	+	0	ID=cds1228;Parent=gene1250;Dbxref=Genbank:WP_002214183.1;Name=WP_002214183.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214183.1;transl_table=11
NC_017154.1	RefSeq	gene	1359562	1359882	.	+	.	ID=gene1251;Name=YPD4_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06270;old_locus_tag=YPD4_1064
NC_017154.1	Protein Homology	CDS	1359562	1359882	.	+	0	ID=cds1229;Parent=gene1251;Dbxref=Genbank:WP_002214181.1;Name=WP_002214181.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214181.1;transl_table=11
NC_017154.1	RefSeq	gene	1360143	1361297	.	+	.	ID=gene1252;Name=YPD4_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06275;old_locus_tag=YPD4_1065
NC_017154.1	Protein Homology	CDS	1360143	1361297	.	+	0	ID=cds1230;Parent=gene1252;Dbxref=Genbank:WP_002210801.1;Name=WP_002210801.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210801.1;transl_table=11
NC_017154.1	RefSeq	gene	1361294	1362232	.	+	.	ID=gene1253;Name=YPD4_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06280;old_locus_tag=YPD4_1066
NC_017154.1	Protein Homology	CDS	1361294	1362232	.	+	0	ID=cds1231;Parent=gene1253;Dbxref=Genbank:WP_002210802.1;Name=WP_002210802.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210802.1;transl_table=11
NC_017154.1	RefSeq	gene	1362229	1363065	.	+	.	ID=gene1254;Name=YPD4_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06285;old_locus_tag=YPD4_1067
NC_017154.1	Protein Homology	CDS	1362229	1363065	.	+	0	ID=cds1232;Parent=gene1254;Dbxref=Genbank:WP_002210803.1;Name=WP_002210803.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210803.1;transl_table=11
NC_017154.1	RefSeq	gene	1363549	1364883	.	+	.	ID=gene1255;Name=YPD4_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06290;old_locus_tag=YPD4_1068
NC_017154.1	Protein Homology	CDS	1363549	1364883	.	+	0	ID=cds1233;Parent=gene1255;Dbxref=Genbank:WP_002210804.1;Name=WP_002210804.1;gbkey=CDS;product=arginine/agmatine antiporter;protein_id=WP_002210804.1;transl_table=11
NC_017154.1	RefSeq	gene	1364953	1367259	.	+	.	ID=gene1256;Name=YPD4_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06295;old_locus_tag=YPD4_1069
NC_017154.1	Protein Homology	CDS	1364953	1367259	.	+	0	ID=cds1234;Parent=gene1256;Dbxref=Genbank:WP_002210805.1;Name=WP_002210805.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;product=arginine decarboxylase;protein_id=WP_002210805.1;transl_table=11
NC_017154.1	RefSeq	gene	1367377	1367580	.	-	.	ID=gene1257;Name=YPD4_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06300
NC_017154.1	Protein Homology	CDS	1367377	1367580	.	-	0	ID=cds1235;Parent=gene1257;Dbxref=Genbank:WP_002210806.1;Name=WP_002210806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210806.1;transl_table=11
NC_017154.1	RefSeq	gene	1367705	1368595	.	-	.	ID=gene1258;Name=YPD4_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06305;old_locus_tag=YPD4_1070
NC_017154.1	Protein Homology	CDS	1367705	1368595	.	-	0	ID=cds1236;Parent=gene1258;Dbxref=Genbank:WP_002210807.1;Name=WP_002210807.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002210807.1;transl_table=11
NC_017154.1	RefSeq	gene	1369007	1370122	.	-	.	ID=gene1259;Name=YPD4_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06310;old_locus_tag=YPD4_1071
NC_017154.1	Protein Homology	CDS	1369007	1370122	.	-	0	ID=cds1237;Parent=gene1259;Dbxref=Genbank:WP_002210809.1;Name=WP_002210809.1;gbkey=CDS;product=phosphoporin protein E;protein_id=WP_002210809.1;transl_table=11
NC_017154.1	RefSeq	gene	1370392	1372572	.	+	.	ID=gene1260;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=YPD4_RS06315;old_locus_tag=YPD4_1072
NC_017154.1	Protein Homology	CDS	1370392	1372572	.	+	0	ID=cds1238;Parent=gene1260;Dbxref=Genbank:WP_002210810.1;Name=WP_002210810.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=WP_002210810.1;transl_table=11
NC_017154.1	RefSeq	gene	1372640	1374082	.	-	.	ID=gene1261;Name=YPD4_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06320;old_locus_tag=YPD4_1073
NC_017154.1	Protein Homology	CDS	1372640	1374082	.	-	0	ID=cds1239;Parent=gene1261;Dbxref=Genbank:WP_002228030.1;Name=WP_002228030.1;gbkey=CDS;product=catalase;protein_id=WP_002228030.1;transl_table=11
NC_017154.1	RefSeq	gene	1374440	1374982	.	+	.	ID=gene1262;Name=YPD4_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06325;old_locus_tag=YPD4_1074
NC_017154.1	Protein Homology	CDS	1374440	1374982	.	+	0	ID=cds1240;Parent=gene1262;Dbxref=Genbank:WP_002210812.1;Name=WP_002210812.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210812.1;transl_table=11
NC_017154.1	RefSeq	gene	1375239	1376447	.	-	.	ID=gene1263;Name=YPD4_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06330;old_locus_tag=YPD4_1075
NC_017154.1	Protein Homology	CDS	1375239	1376447	.	-	0	ID=cds1241;Parent=gene1263;Dbxref=Genbank:WP_002221775.1;Name=WP_002221775.1;Note=tyrosine specific permease;gbkey=CDS;product=tyrosine transporter TyrP;protein_id=WP_002221775.1;transl_table=11
NC_017154.1	RefSeq	gene	1377066	1378259	.	+	.	ID=gene1264;Name=YPD4_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06335;old_locus_tag=YPD4_1076
NC_017154.1	Protein Homology	CDS	1377066	1378259	.	+	0	ID=cds1242;Parent=gene1264;Dbxref=Genbank:WP_002210814.1;Name=WP_002210814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210814.1;transl_table=11
NC_017154.1	RefSeq	gene	1378317	1378826	.	-	.	ID=gene1265;Name=YPD4_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06340;old_locus_tag=YPD4_1077
NC_017154.1	Protein Homology	CDS	1378317	1378826	.	-	0	ID=cds1243;Parent=gene1265;Dbxref=Genbank:WP_002210815.1;Name=WP_002210815.1;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;gbkey=CDS;product=ecotin;protein_id=WP_002210815.1;transl_table=11
NC_017154.1	RefSeq	gene	1378861	1379118	.	-	.	ID=gene1266;Name=YPD4_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06345
NC_017154.1	Protein Homology	CDS	1378861	1379118	.	-	0	ID=cds1244;Parent=gene1266;Dbxref=Genbank:WP_002210816.1;Name=WP_002210816.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002210816.1;transl_table=11
NC_017154.1	RefSeq	gene	1379122	1380252	.	-	.	ID=gene1267;Name=YPD4_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06350;old_locus_tag=YPD4_1078
NC_017154.1	Protein Homology	CDS	1379122	1380252	.	-	0	ID=cds1245;Parent=gene1267;Dbxref=Genbank:WP_002210817.1;Name=WP_002210817.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11
NC_017154.1	RefSeq	gene	1380415	1382703	.	-	.	ID=gene1268;Name=YPD4_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06355;old_locus_tag=YPD4_1079
NC_017154.1	Protein Homology	CDS	1380415	1382703	.	-	0	ID=cds1246;Parent=gene1268;Dbxref=Genbank:WP_002210818.1;Name=WP_002210818.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210818.1;transl_table=11
NC_017154.1	RefSeq	gene	1383197	1383925	.	-	.	ID=gene1269;Name=YPD4_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06360;old_locus_tag=YPD4_1080
NC_017154.1	Protein Homology	CDS	1383197	1383925	.	-	0	ID=cds1247;Parent=gene1269;Dbxref=Genbank:WP_002210820.1;Name=WP_002210820.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=ubiquinone biosynthesis O-methyltransferase;protein_id=WP_002210820.1;transl_table=11
NC_017154.1	RefSeq	gene	1384187	1386862	.	+	.	ID=gene1270;Name=YPD4_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06365;old_locus_tag=YPD4_1081
NC_017154.1	Protein Homology	CDS	1384187	1386862	.	+	0	ID=cds1248;Parent=gene1270;Dbxref=Genbank:WP_002210821.1;Name=WP_002210821.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_002210821.1;transl_table=11
NC_017154.1	RefSeq	gene	1386865	1386990	.	+	.	ID=gene1271;Name=YPD4_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06370
NC_017154.1	Protein Homology	CDS	1386865	1386990	.	+	0	ID=cds1249;Parent=gene1271;Dbxref=Genbank:WP_002210822.1;Name=WP_002210822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210822.1;transl_table=11
NC_017154.1	RefSeq	gene	1387143	1389923	.	+	.	ID=gene1272;Name=YPD4_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06375;old_locus_tag=YPD4_1082
NC_017154.1	Protein Homology	CDS	1387143	1389923	.	+	0	ID=cds1250;Parent=gene1272;Dbxref=Genbank:WP_002210823.1;Name=WP_002210823.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002210823.1;transl_table=11
NC_017154.1	RefSeq	gene	1389991	1390644	.	-	.	ID=gene1273;Name=YPD4_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06380;old_locus_tag=YPD4_1083
NC_017154.1	Protein Homology	CDS	1389991	1390644	.	-	0	ID=cds1251;Parent=gene1273;Dbxref=Genbank:WP_002210824.1;Name=WP_002210824.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210824.1;transl_table=11
NC_017154.1	RefSeq	gene	1390647	1391219	.	-	.	ID=gene1274;Name=YPD4_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06385;old_locus_tag=YPD4_1084
NC_017154.1	Protein Homology	CDS	1390647	1391219	.	-	0	ID=cds1252;Parent=gene1274;Dbxref=Genbank:WP_015683892.1;Name=WP_015683892.1;gbkey=CDS;product=histidine phosphotransferase;protein_id=WP_015683892.1;transl_table=11
NC_017154.1	RefSeq	gene	1391387	1393264	.	-	.	ID=gene1275;Name=YPD4_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06390;old_locus_tag=YPD4_1085
NC_017154.1	Protein Homology	CDS	1391387	1393264	.	-	0	ID=cds1253;Parent=gene1275;Dbxref=Genbank:WP_002231290.1;Name=WP_002231290.1;gbkey=CDS;product=ATPase;protein_id=WP_002231290.1;transl_table=11
NC_017154.1	RefSeq	gene	1393363	1394517	.	-	.	ID=gene1276;Name=YPD4_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06395;old_locus_tag=YPD4_1086
NC_017154.1	Protein Homology	CDS	1393363	1394517	.	-	0	ID=cds1254;Parent=gene1276;Dbxref=Genbank:WP_002210825.1;Name=WP_002210825.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11
NC_017154.1	RefSeq	gene	1395620	1396735	.	+	.	ID=gene1277;Name=YPD4_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06405;old_locus_tag=YPD4_1087
NC_017154.1	Protein Homology	CDS	1395620	1396735	.	+	0	ID=cds1255;Parent=gene1277;Dbxref=Genbank:WP_002210826.1;Name=WP_002210826.1;gbkey=CDS;product=porin;protein_id=WP_002210826.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1396782	1397505	.	+	.	ID=id113;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1396937	1397395	.	+	.	ID=gene1278;Name=YPD4_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06410;old_locus_tag=YPD4_1088
NC_017154.1	Protein Homology	CDS	1396937	1397395	.	+	0	ID=cds1256;Parent=gene1278;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	1397829	1397916	.	+	.	ID=gene1279;Name=YPD4_RS06415;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS06415;old_locus_tag=YPD4_t16
NC_017154.1	tRNAscan-SE	tRNA	1397829	1397916	.	+	.	ID=rna21;Parent=gene1279;anticodon=(pos:1397863..1397865);gbkey=tRNA;product=tRNA-Ser
NC_017154.1	tRNAscan-SE	exon	1397829	1397916	.	+	.	ID=id114;Parent=rna21;anticodon=(pos:1397863..1397865);gbkey=tRNA;product=tRNA-Ser
NC_017154.1	RefSeq	gene	1397922	1397997	.	+	.	ID=gene1280;Name=YPD4_RS06420;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS06420;old_locus_tag=YPD4_t17
NC_017154.1	tRNAscan-SE	tRNA	1397922	1397997	.	+	.	ID=rna22;Parent=gene1280;anticodon=(pos:1397955..1397957);gbkey=tRNA;product=tRNA-Thr
NC_017154.1	tRNAscan-SE	exon	1397922	1397997	.	+	.	ID=id115;Parent=rna22;anticodon=(pos:1397955..1397957);gbkey=tRNA;product=tRNA-Thr
NC_017154.1	RefSeq	gene	1398185	1399351	.	-	.	ID=gene1281;Name=YPD4_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06425;old_locus_tag=YPD4_1089
NC_017154.1	Protein Homology	CDS	1398185	1399351	.	-	0	ID=cds1257;Parent=gene1281;Dbxref=Genbank:WP_002228026.1;Name=WP_002228026.1;Note=this protein has no known enzymatic function;gbkey=CDS;product=beta-lactam-binding protein AmpH;protein_id=WP_002228026.1;transl_table=11
NC_017154.1	RefSeq	gene	1399469	1399639	.	+	.	ID=gene1282;Name=YPD4_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06430
NC_017154.1	Protein Homology	CDS	1399469	1399639	.	+	0	ID=cds1258;Parent=gene1282;Dbxref=Genbank:WP_002208871.1;Name=WP_002208871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208871.1;transl_table=11
NC_017154.1	RefSeq	gene	1399626	1401152	.	-	.	ID=gene1283;Name=YPD4_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06435;old_locus_tag=YPD4_1090
NC_017154.1	Protein Homology	CDS	1399626	1401152	.	-	0	ID=cds1259;Parent=gene1283;Dbxref=Genbank:WP_002208870.1;Name=WP_002208870.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002208870.1;transl_table=11
NC_017154.1	RefSeq	gene	1401568	1402557	.	+	.	ID=gene1284;Name=YPD4_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06440;old_locus_tag=YPD4_1091
NC_017154.1	Protein Homology	CDS	1401568	1402557	.	+	0	ID=cds1260;Parent=gene1284;Dbxref=Genbank:WP_002363585.1;Name=WP_002363585.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002363585.1;transl_table=11
NC_017154.1	RefSeq	gene	1402631	1404418	.	-	.	ID=gene1285;Name=YPD4_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06445;old_locus_tag=YPD4_1092
NC_017154.1	Protein Homology	CDS	1402631	1404418	.	-	0	ID=cds1261;Parent=gene1285;Dbxref=Genbank:WP_002208868.1;Name=WP_002208868.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002208868.1;transl_table=11
NC_017154.1	RefSeq	gene	1404840	1405775	.	-	.	ID=gene1286;Name=YPD4_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06450;old_locus_tag=YPD4_1093
NC_017154.1	Protein Homology	CDS	1404840	1405775	.	-	0	ID=cds1262;Parent=gene1286;Dbxref=Genbank:WP_002208867.1;Name=WP_002208867.1;gbkey=CDS;product=outer membrane protease;protein_id=WP_002208867.1;transl_table=11
NC_017154.1	RefSeq	gene	1405947	1406189	.	-	.	ID=gene1287;Name=YPD4_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06455
NC_017154.1	Protein Homology	CDS	1405947	1406189	.	-	0	ID=cds1263;Parent=gene1287;Dbxref=Genbank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;product=virulence protein MsgA;protein_id=WP_002208866.1;transl_table=11
NC_017154.1	RefSeq	gene	1406395	1407117	.	-	.	ID=gene1288;Name=YPD4_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06460;old_locus_tag=YPD4_1094
NC_017154.1	Protein Homology	CDS	1406395	1407117	.	-	0	ID=cds1264;Parent=gene1288;Dbxref=Genbank:WP_002208864.1;Name=WP_002208864.1;gbkey=CDS;product=peptidase S24;protein_id=WP_002208864.1;transl_table=11
NC_017154.1	RefSeq	gene	1407391	1407870	.	+	.	ID=gene1289;Name=YPD4_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06465;old_locus_tag=YPD4_1095
NC_017154.1	Protein Homology	CDS	1407391	1407870	.	+	0	ID=cds1265;Parent=gene1289;Dbxref=Genbank:WP_002215470.1;Name=WP_002215470.1;gbkey=CDS;product=antitermination protein Q;protein_id=WP_002215470.1;transl_table=11
NC_017154.1	RefSeq	gene	1408081	1409385	.	+	.	ID=gene1290;Name=YPD4_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06470;old_locus_tag=YPD4_1096
NC_017154.1	Protein Homology	CDS	1408081	1409385	.	+	0	ID=cds1266;Parent=gene1290;Dbxref=Genbank:WP_002208862.1;Name=WP_002208862.1;gbkey=CDS;product=tRNA synthetase;protein_id=WP_002208862.1;transl_table=11
NC_017154.1	RefSeq	gene	1409442	1410091	.	+	.	ID=gene1291;Name=YPD4_RS06475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS06475;old_locus_tag=YPD4_1097;pseudo=true
NC_017154.1	Protein Homology	CDS	1409442	1410091	.	+	0	ID=cds1267;Parent=gene1291;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aldolase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1410097	1410906	.	+	.	ID=gene1292;Name=YPD4_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06480;old_locus_tag=YPD4_1098
NC_017154.1	Protein Homology	CDS	1410097	1410906	.	+	0	ID=cds1268;Parent=gene1292;Dbxref=Genbank:WP_002215467.1;Name=WP_002215467.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002215467.1;transl_table=11
NC_017154.1	RefSeq	gene	1410882	1411676	.	+	.	ID=gene1293;Name=YPD4_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06485;old_locus_tag=YPD4_1099
NC_017154.1	Protein Homology	CDS	1410882	1411676	.	+	0	ID=cds1269;Parent=gene1293;Dbxref=Genbank:WP_002208860.1;Name=WP_002208860.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002208860.1;transl_table=11
NC_017154.1	RefSeq	gene	1412307	1412597	.	+	.	ID=gene1294;Name=YPD4_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06490
NC_017154.1	Protein Homology	CDS	1412307	1412597	.	+	0	ID=cds1270;Parent=gene1294;Dbxref=Genbank:WP_002208859.1;Name=WP_002208859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208859.1;transl_table=11
NC_017154.1	RefSeq	gene	1412691	1413260	.	+	.	ID=gene1295;Name=YPD4_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06495;old_locus_tag=YPD4_1100
NC_017154.1	Protein Homology	CDS	1412691	1413260	.	+	0	ID=cds1271;Parent=gene1295;Dbxref=Genbank:WP_044023393.1;Name=WP_044023393.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_044023393.1;transl_table=11
NC_017154.1	RefSeq	gene	1413265	1413459	.	+	.	ID=gene1296;Name=YPD4_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06500
NC_017154.1	Protein Homology	CDS	1413265	1413459	.	+	0	ID=cds1272;Parent=gene1296;Dbxref=Genbank:WP_002208857.1;Name=WP_002208857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208857.1;transl_table=11
NC_017154.1	RefSeq	gene	1413456	1414964	.	+	.	ID=gene1297;Name=YPD4_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06505;old_locus_tag=YPD4_1101
NC_017154.1	Protein Homology	CDS	1413456	1414964	.	+	0	ID=cds1273;Parent=gene1297;Dbxref=Genbank:WP_002208856.1;Name=WP_002208856.1;gbkey=CDS;product=tail protein;protein_id=WP_002208856.1;transl_table=11
NC_017154.1	RefSeq	gene	1414986	1415354	.	+	.	ID=gene1298;Name=YPD4_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06510;old_locus_tag=YPD4_1102
NC_017154.1	Protein Homology	CDS	1414986	1415354	.	+	0	ID=cds1274;Parent=gene1298;Dbxref=Genbank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002208855.1;transl_table=11
NC_017154.1	RefSeq	gene	1415356	1415655	.	+	.	ID=gene1299;Name=YPD4_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06515
NC_017154.1	Protein Homology	CDS	1415356	1415655	.	+	0	ID=cds1275;Parent=gene1299;Dbxref=Genbank:WP_002208854.1;Name=WP_002208854.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208854.1;transl_table=11
NC_017154.1	RefSeq	gene	1415776	1417269	.	+	.	ID=gene1300;Name=YPD4_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06520;old_locus_tag=YPD4_1103
NC_017154.1	Protein Homology	CDS	1415776	1417269	.	+	0	ID=cds1276;Parent=gene1300;Dbxref=Genbank:WP_002208853.1;Name=WP_002208853.1;gbkey=CDS;product=coat protein;protein_id=WP_002208853.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1417309	1417478	.	+	.	ID=id116;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1417536	1418942	.	+	.	ID=gene1301;Name=YPD4_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06525;old_locus_tag=YPD4_1104
NC_017154.1	Protein Homology	CDS	1417536	1418942	.	+	0	ID=cds1277;Parent=gene1301;Dbxref=Genbank:WP_002208852.1;Name=WP_002208852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208852.1;transl_table=11
NC_017154.1	RefSeq	gene	1418939	1419994	.	+	.	ID=gene1302;Name=YPD4_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06530;old_locus_tag=YPD4_1105
NC_017154.1	Protein Homology	CDS	1418939	1419994	.	+	0	ID=cds1278;Parent=gene1302;Dbxref=Genbank:WP_002208850.1;Name=WP_002208850.1;gbkey=CDS;product=tail protein;protein_id=WP_002208850.1;transl_table=11
NC_017154.1	RefSeq	gene	1420010	1420606	.	+	.	ID=gene1303;Name=YPD4_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06535;old_locus_tag=YPD4_1106
NC_017154.1	Protein Homology	CDS	1420010	1420606	.	+	0	ID=cds1279;Parent=gene1303;Dbxref=Genbank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_002215460.1;transl_table=11
NC_017154.1	RefSeq	gene	1420603	1421058	.	+	.	ID=gene1304;Name=YPD4_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06540;old_locus_tag=YPD4_1107
NC_017154.1	Protein Homology	CDS	1420603	1421058	.	+	0	ID=cds1280;Parent=gene1304;Dbxref=Genbank:WP_002208848.1;Name=WP_002208848.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208848.1;transl_table=11
NC_017154.1	RefSeq	gene	1421062	1422198	.	+	.	ID=gene1305;Name=YPD4_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06545;old_locus_tag=YPD4_1108
NC_017154.1	Protein Homology	CDS	1421062	1422198	.	+	0	ID=cds1281;Parent=gene1305;Dbxref=Genbank:WP_002208847.1;Name=WP_002208847.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208847.1;transl_table=11
NC_017154.1	RefSeq	gene	1422195	1422455	.	+	.	ID=gene1306;Name=YPD4_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06550
NC_017154.1	Protein Homology	CDS	1422195	1422455	.	+	0	ID=cds1282;Parent=gene1306;Dbxref=Genbank:WP_002215458.1;Name=WP_002215458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215458.1;transl_table=11
NC_017154.1	RefSeq	gene	1422452	1422799	.	+	.	ID=gene1307;Name=YPD4_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06555;old_locus_tag=YPD4_1109
NC_017154.1	Protein Homology	CDS	1422452	1422799	.	+	0	ID=cds1283;Parent=gene1307;Dbxref=Genbank:WP_002208846.1;Name=WP_002208846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208846.1;transl_table=11
NC_017154.1	RefSeq	gene	1422896	1423675	.	+	.	ID=gene1308;Name=YPD4_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06560;old_locus_tag=YPD4_1110
NC_017154.1	Protein Homology	CDS	1422896	1423675	.	+	0	ID=cds1284;Parent=gene1308;Dbxref=Genbank:WP_002208845.1;Name=WP_002208845.1;gbkey=CDS;product=tail protein;protein_id=WP_002208845.1;transl_table=11
NC_017154.1	RefSeq	gene	1423973	1424713	.	+	.	ID=gene1309;Name=YPD4_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06565;old_locus_tag=YPD4_1111
NC_017154.1	Protein Homology	CDS	1423973	1424713	.	+	0	ID=cds1285;Parent=gene1309;Dbxref=Genbank:WP_002208843.1;Name=WP_002208843.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208843.1;transl_table=11
NC_017154.1	RefSeq	gene	1425004	1426440	.	+	.	ID=gene1310;Name=YPD4_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06570;old_locus_tag=YPD4_1112
NC_017154.1	Protein Homology	CDS	1425004	1426440	.	+	0	ID=cds1286;Parent=gene1310;Dbxref=Genbank:WP_002208842.1;Name=WP_002208842.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_002208842.1;transl_table=11
NC_017154.1	RefSeq	gene	1426566	1426928	.	-	.	ID=gene1311;Name=YPD4_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06575;old_locus_tag=YPD4_1113
NC_017154.1	Protein Homology	CDS	1426566	1426928	.	-	0	ID=cds1287;Parent=gene1311;Dbxref=Genbank:WP_002208841.1;Name=WP_002208841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208841.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1427249	1427369	.	+	.	ID=id117;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1427628	1428116	.	-	.	ID=gene1312;Name=YPD4_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06585;old_locus_tag=YPD4_1114
NC_017154.1	Protein Homology	CDS	1427628	1428116	.	-	0	ID=cds1288;Parent=gene1312;Dbxref=Genbank:WP_002208840.1;Name=WP_002208840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208840.1;transl_table=11
NC_017154.1	RefSeq	gene	1428129	1429277	.	-	.	ID=gene1313;Name=YPD4_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06590;old_locus_tag=YPD4_1115
NC_017154.1	Protein Homology	CDS	1428129	1429277	.	-	0	ID=cds1289;Parent=gene1313;Dbxref=Genbank:WP_002208839.1;Name=WP_002208839.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002208839.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1428844	1429396	.	+	.	ID=id118;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1430067	1430143	.	-	.	ID=gene1314;Name=YPD4_RS06600;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS06600;old_locus_tag=YPD4_t18
NC_017154.1	tRNAscan-SE	tRNA	1430067	1430143	.	-	.	ID=rna23;Parent=gene1314;anticodon=(pos:complement(1430107..1430109));gbkey=tRNA;product=tRNA-Pro
NC_017154.1	tRNAscan-SE	exon	1430067	1430143	.	-	.	ID=id119;Parent=rna23;anticodon=(pos:complement(1430107..1430109));gbkey=tRNA;product=tRNA-Pro
NC_017154.1	RefSeq	gene	1430248	1432044	.	-	.	ID=gene1315;Name=YPD4_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06605;old_locus_tag=YPD4_1117
NC_017154.1	Protein Homology	CDS	1430248	1432044	.	-	0	ID=cds1290;Parent=gene1315;Dbxref=Genbank:WP_002208837.1;Name=WP_002208837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208837.1;transl_table=11
NC_017154.1	RefSeq	gene	1432072	1432299	.	-	.	ID=gene1316;Name=YPD4_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06610
NC_017154.1	Protein Homology	CDS	1432072	1432299	.	-	0	ID=cds1291;Parent=gene1316;Dbxref=Genbank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208836.1;transl_table=11
NC_017154.1	RefSeq	gene	1432477	1433481	.	+	.	ID=gene1317;Name=YPD4_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06615;old_locus_tag=YPD4_1118
NC_017154.1	Protein Homology	CDS	1432477	1433481	.	+	0	ID=cds1292;Parent=gene1317;Dbxref=Genbank:WP_002208835.1;Name=WP_002208835.1;gbkey=CDS;product=nucleoid-associated protein;protein_id=WP_002208835.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1433527	1434250	.	+	.	ID=id120;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1433537	1433692	.	+	.	ID=gene1318;Name=YPD4_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06620
NC_017154.1	Protein Homology	CDS	1433537	1433692	.	+	0	ID=cds1293;Parent=gene1318;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	1433682	1434140	.	+	.	ID=gene1319;Name=YPD4_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06625;old_locus_tag=YPD4_1119
NC_017154.1	Protein Homology	CDS	1433682	1434140	.	+	0	ID=cds1294;Parent=gene1319;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	1434279	1434563	.	-	.	ID=gene1320;Name=YPD4_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06630
NC_017154.1	Protein Homology	CDS	1434279	1434563	.	-	0	ID=cds1295;Parent=gene1320;Dbxref=Genbank:WP_002208834.1;Name=WP_002208834.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11
NC_017154.1	RefSeq	gene	1434725	1436482	.	-	.	ID=gene1321;Name=YPD4_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06635;old_locus_tag=YPD4_1120
NC_017154.1	Protein Homology	CDS	1434725	1436482	.	-	0	ID=cds1296;Parent=gene1321;Dbxref=Genbank:WP_002208833.1;Name=WP_002208833.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208833.1;transl_table=11
NC_017154.1	RefSeq	gene	1436996	1437703	.	+	.	ID=gene1322;Name=YPD4_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06640;old_locus_tag=YPD4_1121
NC_017154.1	Protein Homology	CDS	1436996	1437703	.	+	0	ID=cds1297;Parent=gene1322;Dbxref=Genbank:WP_002208832.1;Name=WP_002208832.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=ribosomal small subunit pseudouridine synthase A;protein_id=WP_002208832.1;transl_table=11
NC_017154.1	RefSeq	gene	1437822	1439021	.	+	.	ID=gene1323;Name=YPD4_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06645;old_locus_tag=YPD4_1122
NC_017154.1	Protein Homology	CDS	1437822	1439021	.	+	0	ID=cds1298;Parent=gene1323;Dbxref=Genbank:WP_002208831.1;Name=WP_002208831.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002208831.1;transl_table=11
NC_017154.1	RefSeq	gene	1439988	1440332	.	+	.	ID=gene1324;Name=YPD4_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06650;old_locus_tag=YPD4_1123
NC_017154.1	Protein Homology	CDS	1439988	1440332	.	+	0	ID=cds1299;Parent=gene1324;Dbxref=Genbank:WP_002208829.1;Name=WP_002208829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208829.1;transl_table=11
NC_017154.1	RefSeq	gene	1440393	1441985	.	-	.	ID=gene1325;Name=YPD4_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06655;old_locus_tag=YPD4_1124
NC_017154.1	Protein Homology	CDS	1440393	1441985	.	-	0	ID=cds1300;Parent=gene1325;Dbxref=Genbank:WP_002208828.1;Name=WP_002208828.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208828.1;transl_table=11
NC_017154.1	RefSeq	gene	1441987	1443012	.	-	.	ID=gene1326;Name=YPD4_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06660;old_locus_tag=YPD4_1125
NC_017154.1	Protein Homology	CDS	1441987	1443012	.	-	0	ID=cds1301;Parent=gene1326;Dbxref=Genbank:WP_002353954.1;Name=WP_002353954.1;Note=part of the microcin C transport system;gbkey=CDS;product=microcin C ABC transporter permease;protein_id=WP_002353954.1;transl_table=11
NC_017154.1	RefSeq	gene	1443015	1444115	.	-	.	ID=gene1327;Name=YPD4_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06665;old_locus_tag=YPD4_1126
NC_017154.1	Protein Homology	CDS	1443015	1444115	.	-	0	ID=cds1302;Parent=gene1327;Dbxref=Genbank:WP_002208826.1;Name=WP_002208826.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11
NC_017154.1	RefSeq	gene	1444125	1445933	.	-	.	ID=gene1328;Name=YPD4_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06670;old_locus_tag=YPD4_1127
NC_017154.1	Protein Homology	CDS	1444125	1445933	.	-	0	ID=cds1303;Parent=gene1328;Dbxref=Genbank:WP_002208825.1;Name=WP_002208825.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002208825.1;transl_table=11
NC_017154.1	RefSeq	gene	1446015	1447487	.	-	.	ID=gene1329;Name=YPD4_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06675;old_locus_tag=YPD4_1128
NC_017154.1	Protein Homology	CDS	1446015	1447487	.	-	0	ID=cds1304;Parent=gene1329;Dbxref=Genbank:WP_002229119.1;Name=WP_002229119.1;Note=involved in resistance to the phages N4 and lambda;gbkey=CDS;product=phage resistance protein;protein_id=WP_002229119.1;transl_table=11
NC_017154.1	RefSeq	gene	1448183	1448767	.	-	.	ID=gene1330;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=YPD4_RS06680;old_locus_tag=YPD4_1129
NC_017154.1	Protein Homology	CDS	1448183	1448767	.	-	0	ID=cds1305;Parent=gene1330;Dbxref=Genbank:WP_002208822.1;Name=WP_002208822.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=hypothetical protein;protein_id=WP_002208822.1;transl_table=11
NC_017154.1	RefSeq	gene	1449209	1449910	.	-	.	ID=gene1331;Name=YPD4_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06685;old_locus_tag=YPD4_1130
NC_017154.1	Protein Homology	CDS	1449209	1449910	.	-	0	ID=cds1306;Parent=gene1331;Dbxref=Genbank:WP_002208820.1;Name=WP_002208820.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208820.1;transl_table=11
NC_017154.1	RefSeq	gene	1449969	1450952	.	-	.	ID=gene1332;Name=YPD4_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06690;old_locus_tag=YPD4_1131
NC_017154.1	Protein Homology	CDS	1449969	1450952	.	-	0	ID=cds1307;Parent=gene1332;Dbxref=Genbank:WP_002208819.1;Name=WP_002208819.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208819.1;transl_table=11
NC_017154.1	RefSeq	gene	1451276	1451389	.	-	.	ID=gene1333;Name=YPD4_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06695
NC_017154.1	Protein Homology	CDS	1451276	1451389	.	-	0	ID=cds1308;Parent=gene1333;Dbxref=Genbank:WP_002208817.1;Name=WP_002208817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208817.1;transl_table=11
NC_017154.1	RefSeq	gene	1451760	1452503	.	+	.	ID=gene1334;Name=YPD4_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06700;old_locus_tag=YPD4_1132
NC_017154.1	Protein Homology	CDS	1451760	1452503	.	+	0	ID=cds1309;Parent=gene1334;Dbxref=Genbank:WP_002208816.1;Name=WP_002208816.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208816.1;transl_table=11
NC_017154.1	RefSeq	gene	1452647	1454119	.	-	.	ID=gene1335;Name=YPD4_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06705;old_locus_tag=YPD4_1133
NC_017154.1	Protein Homology	CDS	1452647	1454119	.	-	0	ID=cds1310;Parent=gene1335;Dbxref=Genbank:WP_002208815.1;Name=WP_002208815.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_002208815.1;transl_table=11
NC_017154.1	RefSeq	gene	1454704	1455897	.	+	.	ID=gene1336;Name=YPD4_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06710;old_locus_tag=YPD4_1134
NC_017154.1	Protein Homology	CDS	1454704	1455897	.	+	0	ID=cds1311;Parent=gene1336;Dbxref=Genbank:WP_002208813.1;Name=WP_002208813.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;product=mannonate dehydratase;protein_id=WP_002208813.1;transl_table=11
NC_017154.1	RefSeq	gene	1456037	1456609	.	-	.	ID=gene1337;Name=YPD4_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06715;old_locus_tag=YPD4_1135
NC_017154.1	Protein Homology	CDS	1456037	1456609	.	-	0	ID=cds1312;Parent=gene1337;Dbxref=Genbank:WP_002228019.1;Name=WP_002228019.1;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;gbkey=CDS;product=elongation factor P-like protein;protein_id=WP_002228019.1;transl_table=11
NC_017154.1	RefSeq	gene	1456713	1457957	.	-	.	ID=gene1338;Name=YPD4_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06720;old_locus_tag=YPD4_1136
NC_017154.1	Protein Homology	CDS	1456713	1457957	.	-	0	ID=cds1313;Parent=gene1338;Dbxref=Genbank:WP_002208812.1;Name=WP_002208812.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=tryptophan permease;protein_id=WP_002208812.1;transl_table=11
NC_017154.1	RefSeq	gene	1458332	1458586	.	+	.	ID=gene1339;Name=YPD4_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06725
NC_017154.1	Protein Homology	CDS	1458332	1458586	.	+	0	ID=cds1314;Parent=gene1339;Dbxref=Genbank:WP_002208811.1;Name=WP_002208811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208811.1;transl_table=11
NC_017154.1	RefSeq	gene	1458655	1459470	.	-	.	ID=gene1340;Name=YPD4_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06730;old_locus_tag=YPD4_1137
NC_017154.1	Protein Homology	CDS	1458655	1459470	.	-	0	ID=cds1315;Parent=gene1340;Dbxref=Genbank:WP_002208810.1;Name=WP_002208810.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002208810.1;transl_table=11
NC_017154.1	RefSeq	gene	1459481	1460431	.	-	.	ID=gene1341;Name=YPD4_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06735;old_locus_tag=YPD4_1138
NC_017154.1	Protein Homology	CDS	1459481	1460431	.	-	0	ID=cds1316;Parent=gene1341;Dbxref=Genbank:WP_002264752.1;Name=WP_002264752.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_002264752.1;transl_table=11
NC_017154.1	RefSeq	gene	1460443	1461585	.	-	.	ID=gene1342;Name=YPD4_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06740;old_locus_tag=YPD4_1139
NC_017154.1	Protein Homology	CDS	1460443	1461585	.	-	0	ID=cds1317;Parent=gene1342;Dbxref=Genbank:WP_002208808.1;Name=WP_002208808.1;gbkey=CDS;product=fumarylacetoacetate hydrolase;protein_id=WP_002208808.1;transl_table=11
NC_017154.1	RefSeq	gene	1461937	1463433	.	+	.	ID=gene1343;Name=YPD4_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06745;old_locus_tag=YPD4_1140
NC_017154.1	Protein Homology	CDS	1461937	1463433	.	+	0	ID=cds1318;Parent=gene1343;Dbxref=Genbank:WP_002208807.1;Name=WP_002208807.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002208807.1;transl_table=11
NC_017154.1	RefSeq	gene	1463437	1464990	.	+	.	ID=gene1344;Name=YPD4_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06750;old_locus_tag=YPD4_1141
NC_017154.1	Protein Homology	CDS	1463437	1464990	.	+	0	ID=cds1319;Parent=gene1344;Dbxref=Genbank:WP_002208806.1;Name=WP_002208806.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002208806.1;transl_table=11
NC_017154.1	RefSeq	gene	1465010	1465720	.	+	.	ID=gene1345;Name=YPD4_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06755;old_locus_tag=YPD4_1142
NC_017154.1	Protein Homology	CDS	1465010	1465720	.	+	0	ID=cds1320;Parent=gene1345;Dbxref=Genbank:WP_002208805.1;Name=WP_002208805.1;gbkey=CDS;product=ribose-5-phosphate isomerase A 2;protein_id=WP_002208805.1;transl_table=11
NC_017154.1	RefSeq	gene	1465852	1466940	.	+	.	ID=gene1346;Name=YPD4_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06760;old_locus_tag=YPD4_1143
NC_017154.1	Protein Homology	CDS	1465852	1466940	.	+	0	ID=cds1321;Parent=gene1346;Dbxref=Genbank:WP_002208804.1;Name=WP_002208804.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002208804.1;transl_table=11
NC_017154.1	RefSeq	gene	1467109	1468623	.	+	.	ID=gene1347;Name=YPD4_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06765;old_locus_tag=YPD4_1144
NC_017154.1	Protein Homology	CDS	1467109	1468623	.	+	0	ID=cds1322;Parent=gene1347;Dbxref=Genbank:WP_002363696.1;Name=WP_002363696.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002363696.1;transl_table=11
NC_017154.1	RefSeq	gene	1468659	1469657	.	+	.	ID=gene1348;Name=YPD4_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06770;old_locus_tag=YPD4_1145
NC_017154.1	Protein Homology	CDS	1468659	1469657	.	+	0	ID=cds1323;Parent=gene1348;Dbxref=Genbank:WP_002208802.1;Name=WP_002208802.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002208802.1;transl_table=11
NC_017154.1	RefSeq	gene	1469770	1470226	.	-	.	ID=gene1349;Name=YPD4_RS06775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS06775;old_locus_tag=YPD4_1146;pseudo=true
NC_017154.1	Protein Homology	CDS	1469770	1470226	.	-	0	ID=cds1324;Parent=gene1349;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ADP-ribose pyrophosphatase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1470488	1471621	.	+	.	ID=gene1350;Name=YPD4_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06780;old_locus_tag=YPD4_1147
NC_017154.1	Protein Homology	CDS	1470488	1471621	.	+	0	ID=cds1325;Parent=gene1350;Dbxref=Genbank:WP_002208799.1;Name=WP_002208799.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002208799.1;transl_table=11
NC_017154.1	RefSeq	gene	1471618	1472556	.	+	.	ID=gene1351;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=YPD4_RS06785;old_locus_tag=YPD4_1148
NC_017154.1	Protein Homology	CDS	1471618	1472556	.	+	0	ID=cds1326;Parent=gene1351;Dbxref=Genbank:WP_002208798.1;Name=WP_002208798.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_002208798.1;transl_table=11
NC_017154.1	RefSeq	gene	1472571	1474271	.	+	.	ID=gene1352;Name=YPD4_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06790;old_locus_tag=YPD4_1149
NC_017154.1	Protein Homology	CDS	1472571	1474271	.	+	0	ID=cds1327;Parent=gene1352;Dbxref=Genbank:WP_002208797.1;Name=WP_002208797.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS fructose transporter subunit IIBC;protein_id=WP_002208797.1;transl_table=11
NC_017154.1	RefSeq	gene	1474596	1475240	.	+	.	ID=gene1353;Name=YPD4_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06795;old_locus_tag=YPD4_1150
NC_017154.1	Protein Homology	CDS	1474596	1475240	.	+	0	ID=cds1328;Parent=gene1353;Dbxref=Genbank:WP_002208796.1;Name=WP_002208796.1;gbkey=CDS;product=protein PsaE;protein_id=WP_002208796.1;transl_table=11
NC_017154.1	RefSeq	gene	1475237	1475725	.	+	.	ID=gene1354;Name=YPD4_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06800;old_locus_tag=YPD4_1151
NC_017154.1	Protein Homology	CDS	1475237	1475725	.	+	0	ID=cds1329;Parent=gene1354;Dbxref=Genbank:WP_002216523.1;Name=WP_002216523.1;gbkey=CDS;product=protein PsaF;protein_id=WP_002216523.1;transl_table=11
NC_017154.1	RefSeq	gene	1476270	1476746	.	+	.	ID=gene1355;Name=YPD4_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06805;old_locus_tag=YPD4_1152
NC_017154.1	Protein Homology	CDS	1476270	1476746	.	+	0	ID=cds1330;Parent=gene1355;Dbxref=Genbank:WP_002208794.1;Name=WP_002208794.1;gbkey=CDS;product=pH 6 antigen;protein_id=WP_002208794.1;transl_table=11
NC_017154.1	RefSeq	gene	1476873	1477694	.	+	.	ID=gene1356;Name=YPD4_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06810;old_locus_tag=YPD4_1153
NC_017154.1	Protein Homology	CDS	1476873	1477694	.	+	0	ID=cds1331;Parent=gene1356;Dbxref=Genbank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11
NC_017154.1	RefSeq	gene	1477778	1480249	.	+	.	ID=gene1357;Name=YPD4_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06815;old_locus_tag=YPD4_1154
NC_017154.1	Protein Homology	CDS	1477778	1480249	.	+	0	ID=cds1332;Parent=gene1357;Dbxref=Genbank:WP_002208792.1;Name=WP_002208792.1;gbkey=CDS;product=usher protein;protein_id=WP_002208792.1;transl_table=11
NC_017154.1	RefSeq	gene	1480336	1481193	.	-	.	ID=gene1358;Name=YPD4_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06820;old_locus_tag=YPD4_1155
NC_017154.1	Protein Homology	CDS	1480336	1481193	.	-	0	ID=cds1333;Parent=gene1358;Dbxref=Genbank:WP_002208791.1;Name=WP_002208791.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease;protein_id=WP_002208791.1;transl_table=11
NC_017154.1	RefSeq	gene	1481357	1482446	.	-	.	ID=gene1359;Name=YPD4_RS06825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS06825;pseudo=true
NC_017154.1	Protein Homology	CDS	1481357	1482446	.	-	0	ID=cds1334;Parent=gene1359;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1483104	1483974	.	+	.	ID=gene1360;Name=YPD4_RS06830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS06830;pseudo=true
NC_017154.1	Protein Homology	CDS	1483104	1483974	.	+	0	ID=cds1335;Parent=gene1360;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1484232	1485743	.	+	.	ID=gene1361;Name=YPD4_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06835;old_locus_tag=YPD4_1159
NC_017154.1	Protein Homology	CDS	1484232	1485743	.	+	0	ID=cds1336;Parent=gene1361;Dbxref=Genbank:WP_002208786.1;Name=WP_002208786.1;gbkey=CDS;product=lysine transporter;protein_id=WP_002208786.1;transl_table=11
NC_017154.1	RefSeq	gene	1486029	1487174	.	+	.	ID=gene1362;Name=YPD4_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06840;old_locus_tag=YPD4_1160
NC_017154.1	Protein Homology	CDS	1486029	1487174	.	+	0	ID=cds1337;Parent=gene1362;Dbxref=Genbank:WP_002208785.1;Name=WP_002208785.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208785.1;transl_table=11
NC_017154.1	RefSeq	gene	1487369	1488451	.	+	.	ID=gene1363;Name=YPD4_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06845;old_locus_tag=YPD4_1161
NC_017154.1	Protein Homology	CDS	1487369	1488451	.	+	0	ID=cds1338;Parent=gene1363;Dbxref=Genbank:WP_002215451.1;Name=WP_002215451.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_002215451.1;transl_table=11
NC_017154.1	RefSeq	gene	1488448	1489236	.	+	.	ID=gene1364;Name=YPD4_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06850;old_locus_tag=YPD4_1162
NC_017154.1	Protein Homology	CDS	1488448	1489236	.	+	0	ID=cds1339;Parent=gene1364;Dbxref=Genbank:WP_002208783.1;Name=WP_002208783.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002208783.1;transl_table=11
NC_017154.1	RefSeq	gene	1489496	1491493	.	+	.	ID=gene1365;Name=YPD4_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06855;old_locus_tag=YPD4_1163
NC_017154.1	Protein Homology	CDS	1489496	1491493	.	+	0	ID=cds1340;Parent=gene1365;Dbxref=Genbank:WP_002208782.1;Name=WP_002208782.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11
NC_017154.1	RefSeq	gene	1491763	1492383	.	-	.	ID=gene1366;Name=YPD4_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06860;old_locus_tag=YPD4_1164
NC_017154.1	Protein Homology	CDS	1491763	1492383	.	-	0	ID=cds1341;Parent=gene1366;Dbxref=Genbank:WP_002208781.1;Name=WP_002208781.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002208781.1;transl_table=11
NC_017154.1	RefSeq	gene	1492537	1493187	.	-	.	ID=gene1367;Name=YPD4_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06865;old_locus_tag=YPD4_1165
NC_017154.1	Protein Homology	CDS	1492537	1493187	.	-	0	ID=cds1342;Parent=gene1367;Dbxref=Genbank:WP_002215448.1;Name=WP_002215448.1;gbkey=CDS;product=hydrolase;protein_id=WP_002215448.1;transl_table=11
NC_017154.1	RefSeq	gene	1493674	1494741	.	+	.	ID=gene1368;Name=YPD4_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06870;old_locus_tag=YPD4_1166
NC_017154.1	Protein Homology	CDS	1493674	1494741	.	+	0	ID=cds1343;Parent=gene1368;Dbxref=Genbank:WP_002208778.1;Name=WP_002208778.1;gbkey=CDS;product=2-oxobutyrate oxidase;protein_id=WP_002208778.1;transl_table=11
NC_017154.1	RefSeq	gene	1494969	1495793	.	+	.	ID=gene1369;Name=YPD4_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06875;old_locus_tag=YPD4_1167
NC_017154.1	Protein Homology	CDS	1494969	1495793	.	+	0	ID=cds1344;Parent=gene1369;Dbxref=Genbank:WP_002208777.1;Name=WP_002208777.1;gbkey=CDS;product=metal ABC transporter substrate-binding protein;protein_id=WP_002208777.1;transl_table=11
NC_017154.1	RefSeq	gene	1495790	1496776	.	+	.	ID=gene1370;Name=YPD4_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06880;old_locus_tag=YPD4_1168
NC_017154.1	Protein Homology	CDS	1495790	1496776	.	+	0	ID=cds1345;Parent=gene1370;Dbxref=Genbank:WP_002208776.1;Name=WP_002208776.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11
NC_017154.1	RefSeq	gene	1496773	1497444	.	+	.	ID=gene1371;Name=YPD4_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06885;old_locus_tag=YPD4_1169
NC_017154.1	Protein Homology	CDS	1496773	1497444	.	+	0	ID=cds1346;Parent=gene1371;Dbxref=Genbank:WP_002208775.1;Name=WP_002208775.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002208775.1;transl_table=11
NC_017154.1	RefSeq	gene	1497779	1498984	.	+	.	ID=gene1372;Name=YPD4_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06890;old_locus_tag=YPD4_1170
NC_017154.1	Protein Homology	CDS	1497779	1498984	.	+	0	ID=cds1347;Parent=gene1372;Dbxref=Genbank:WP_002208774.1;Name=WP_002208774.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002208774.1;transl_table=11
NC_017154.1	RefSeq	gene	1499275	1499427	.	+	.	ID=gene1373;Name=YPD4_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06895
NC_017154.1	Protein Homology	CDS	1499275	1499427	.	+	0	ID=cds1348;Parent=gene1373;Dbxref=Genbank:WP_002215444.1;Name=WP_002215444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215444.1;transl_table=11
NC_017154.1	RefSeq	gene	1499424	1500725	.	-	.	ID=gene1374;Name=YPD4_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06900;old_locus_tag=YPD4_1171
NC_017154.1	Protein Homology	CDS	1499424	1500725	.	-	0	ID=cds1349;Parent=gene1374;Dbxref=Genbank:WP_002215443.1;Name=WP_002215443.1;gbkey=CDS;product=serine transporter;protein_id=WP_002215443.1;transl_table=11
NC_017154.1	RefSeq	gene	1501825	1502589	.	-	.	ID=gene1375;Name=YPD4_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06905;old_locus_tag=YPD4_1172
NC_017154.1	Protein Homology	CDS	1501825	1502589	.	-	0	ID=cds1350;Parent=gene1375;Dbxref=Genbank:WP_002208770.1;Name=WP_002208770.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208770.1;transl_table=11
NC_017154.1	RefSeq	gene	1502819	1503490	.	-	.	ID=gene1376;Name=YPD4_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06910;old_locus_tag=YPD4_1173
NC_017154.1	Protein Homology	CDS	1502819	1503490	.	-	0	ID=cds1351;Parent=gene1376;Dbxref=Genbank:WP_002208769.1;Name=WP_002208769.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002208769.1;transl_table=11
NC_017154.1	RefSeq	gene	1503748	1504353	.	-	.	ID=gene1377;Name=YPD4_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06915;old_locus_tag=YPD4_1174
NC_017154.1	Protein Homology	CDS	1503748	1504353	.	-	0	ID=cds1352;Parent=gene1377;Dbxref=Genbank:WP_002208768.1;Name=WP_002208768.1;gbkey=CDS;product=UDP-diphosphatase;protein_id=WP_002208768.1;transl_table=11
NC_017154.1	RefSeq	gene	1504353	1505024	.	-	.	ID=gene1378;Name=YPD4_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06920;old_locus_tag=YPD4_1175
NC_017154.1	Protein Homology	CDS	1504353	1505024	.	-	0	ID=cds1353;Parent=gene1378;Dbxref=Genbank:WP_002208767.1;Name=WP_002208767.1;gbkey=CDS;product=phosphoesterase;protein_id=WP_002208767.1;transl_table=11
NC_017154.1	RefSeq	gene	1505501	1507189	.	-	.	ID=gene1379;Name=YPD4_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06925;old_locus_tag=YPD4_1176
NC_017154.1	Protein Homology	CDS	1505501	1507189	.	-	0	ID=cds1354;Parent=gene1379;Dbxref=Genbank:WP_002208766.1;Name=WP_002208766.1;gbkey=CDS;product=transporter;protein_id=WP_002208766.1;transl_table=11
NC_017154.1	RefSeq	gene	1507599	1507862	.	-	.	ID=gene1380;Name=YPD4_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06930
NC_017154.1	Protein Homology	CDS	1507599	1507862	.	-	0	ID=cds1355;Parent=gene1380;Dbxref=Genbank:WP_002208765.1;Name=WP_002208765.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208765.1;transl_table=11
NC_017154.1	RefSeq	gene	1508325	1508639	.	+	.	ID=gene1381;Name=YPD4_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06935
NC_017154.1	Protein Homology	CDS	1508325	1508639	.	+	0	ID=cds1356;Parent=gene1381;Dbxref=Genbank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216036.1;transl_table=11
NC_017154.1	RefSeq	gene	1508655	1508774	.	+	.	ID=gene1382;Name=YPD4_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06940
NC_017154.1	Protein Homology	CDS	1508655	1508774	.	+	0	ID=cds1357;Parent=gene1382;Dbxref=Genbank:WP_002216035.1;Name=WP_002216035.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216035.1;transl_table=11
NC_017154.1	RefSeq	gene	1508781	1509266	.	+	.	ID=gene1383;Name=YPD4_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06945;old_locus_tag=YPD4_1177
NC_017154.1	Protein Homology	CDS	1508781	1509266	.	+	0	ID=cds1358;Parent=gene1383;Dbxref=Genbank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208763.1;transl_table=11
NC_017154.1	RefSeq	gene	1509784	1510893	.	+	.	ID=gene1384;Name=YPD4_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06950;old_locus_tag=YPD4_1178
NC_017154.1	Protein Homology	CDS	1509784	1510893	.	+	0	ID=cds1359;Parent=gene1384;Dbxref=Genbank:WP_002208762.1;Name=WP_002208762.1;gbkey=CDS;product=putrescine ABC transporter substrate-binding protein;protein_id=WP_002208762.1;transl_table=11
NC_017154.1	RefSeq	gene	1511064	1512197	.	+	.	ID=gene1385;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=YPD4_RS06955;old_locus_tag=YPD4_1179
NC_017154.1	Protein Homology	CDS	1511064	1512197	.	+	0	ID=cds1360;Parent=gene1385;Dbxref=Genbank:WP_002208760.1;Name=WP_002208760.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=WP_002208760.1;transl_table=11
NC_017154.1	RefSeq	gene	1512222	1513187	.	+	.	ID=gene1386;Name=YPD4_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06960;old_locus_tag=YPD4_1180
NC_017154.1	Protein Homology	CDS	1512222	1513187	.	+	0	ID=cds1361;Parent=gene1386;Dbxref=Genbank:WP_002208759.1;Name=WP_002208759.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208759.1;transl_table=11
NC_017154.1	RefSeq	gene	1513184	1514029	.	+	.	ID=gene1387;Name=YPD4_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06965;old_locus_tag=YPD4_1181
NC_017154.1	Protein Homology	CDS	1513184	1514029	.	+	0	ID=cds1362;Parent=gene1387;Dbxref=Genbank:WP_002208758.1;Name=WP_002208758.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208758.1;transl_table=11
NC_017154.1	RefSeq	gene	1514154	1514618	.	+	.	ID=gene1388;Name=YPD4_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06970;old_locus_tag=YPD4_1182
NC_017154.1	Protein Homology	CDS	1514154	1514618	.	+	0	ID=cds1363;Parent=gene1388;Dbxref=Genbank:WP_002208757.1;Name=WP_002208757.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208757.1;transl_table=11
NC_017154.1	RefSeq	gene	1514702	1515831	.	+	.	ID=gene1389;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=pseudogene;locus_tag=YPD4_RS06975;pseudo=true
NC_017154.1	Protein Homology	CDS	1514702	1515831	.	+	0	ID=cds1364;Parent=gene1389;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=rumB;product=23S rRNA methyltransferase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1515958	1516689	.	-	.	ID=gene1390;Name=YPD4_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06980;old_locus_tag=YPD4_1185
NC_017154.1	Protein Homology	CDS	1515958	1516689	.	-	0	ID=cds1365;Parent=gene1390;Dbxref=Genbank:WP_002220045.1;Name=WP_002220045.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002220045.1;transl_table=11
NC_017154.1	RefSeq	gene	1516809	1516925	.	+	.	ID=gene1391;Name=YPD4_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06985
NC_017154.1	Protein Homology	CDS	1516809	1516925	.	+	0	ID=cds1366;Parent=gene1391;Dbxref=Genbank:WP_002211379.1;Name=WP_002211379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211379.1;transl_table=11
NC_017154.1	RefSeq	gene	1516937	1517167	.	+	.	ID=gene1392;Name=YPD4_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06990
NC_017154.1	Protein Homology	CDS	1516937	1517167	.	+	0	ID=cds1367;Parent=gene1392;Dbxref=Genbank:WP_002228004.1;Name=WP_002228004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228004.1;transl_table=11
NC_017154.1	RefSeq	gene	1517508	1518434	.	+	.	ID=gene1393;Name=YPD4_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS06995;old_locus_tag=YPD4_1186
NC_017154.1	Protein Homology	CDS	1517508	1518434	.	+	0	ID=cds1368;Parent=gene1393;Dbxref=Genbank:WP_002211378.1;Name=WP_002211378.1;gbkey=CDS;product=SPFH/band 7 family protein;protein_id=WP_002211378.1;transl_table=11
NC_017154.1	RefSeq	gene	1518846	1519937	.	+	.	ID=gene1394;Name=YPD4_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07000;old_locus_tag=YPD4_1187
NC_017154.1	Protein Homology	CDS	1518846	1519937	.	+	0	ID=cds1369;Parent=gene1394;Dbxref=Genbank:WP_002211377.1;Name=WP_002211377.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002211377.1;transl_table=11
NC_017154.1	RefSeq	gene	1519937	1520993	.	+	.	ID=gene1395;Name=YPD4_RS07005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS07005;pseudo=true
NC_017154.1	Protein Homology	CDS	1519937	1520993	.	+	0	ID=cds1370;Parent=gene1395;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron-siderophore ABC transporter permease;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1520990	1521775	.	+	.	ID=gene1396;Name=YPD4_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07010;old_locus_tag=YPD4_1190
NC_017154.1	Protein Homology	CDS	1520990	1521775	.	+	0	ID=cds1371;Parent=gene1396;Dbxref=Genbank:WP_002211375.1;Name=WP_002211375.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002211375.1;transl_table=11
NC_017154.1	RefSeq	gene	1521763	1522560	.	+	.	ID=gene1397;Name=YPD4_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07015;old_locus_tag=YPD4_1191
NC_017154.1	Protein Homology	CDS	1521763	1522560	.	+	0	ID=cds1372;Parent=gene1397;Dbxref=Genbank:WP_002211374.1;Name=WP_002211374.1;gbkey=CDS;product=nicotianamine synthase;protein_id=WP_002211374.1;transl_table=11
NC_017154.1	RefSeq	gene	1522553	1523923	.	+	.	ID=gene1398;Name=YPD4_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07020;old_locus_tag=YPD4_1192
NC_017154.1	Protein Homology	CDS	1522553	1523923	.	+	0	ID=cds1373;Parent=gene1398;Dbxref=Genbank:WP_002211373.1;Name=WP_002211373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211373.1;transl_table=11
NC_017154.1	RefSeq	gene	1523920	1524765	.	+	.	ID=gene1399;Name=YPD4_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07025;old_locus_tag=YPD4_1193
NC_017154.1	Protein Homology	CDS	1523920	1524765	.	+	0	ID=cds1374;Parent=gene1399;Dbxref=Genbank:WP_002211372.1;Name=WP_002211372.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211372.1;transl_table=11
NC_017154.1	RefSeq	gene	1524955	1525623	.	-	.	ID=gene1400;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=YPD4_RS07035;old_locus_tag=YPD4_1194
NC_017154.1	Protein Homology	CDS	1524955	1525623	.	-	0	ID=cds1375;Parent=gene1400;Dbxref=Genbank:WP_002211370.1;Name=WP_002211370.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;protein_id=WP_002211370.1;transl_table=11
NC_017154.1	RefSeq	gene	1525623	1526339	.	-	.	ID=gene1401;Name=YPD4_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07040;old_locus_tag=YPD4_1195
NC_017154.1	Protein Homology	CDS	1525623	1526339	.	-	0	ID=cds1376;Parent=gene1401;Dbxref=Genbank:WP_002211369.1;Name=WP_002211369.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;product=arginine transporter permease subunit ArtQ;protein_id=WP_002211369.1;transl_table=11
NC_017154.1	RefSeq	gene	1526351	1527082	.	-	.	ID=gene1402;Name=YPD4_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07045;old_locus_tag=YPD4_1196
NC_017154.1	Protein Homology	CDS	1526351	1527082	.	-	0	ID=cds1377;Parent=gene1402;Dbxref=Genbank:WP_002211368.1;Name=WP_002211368.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002211368.1;transl_table=11
NC_017154.1	RefSeq	gene	1527103	1527831	.	-	.	ID=gene1403;Name=YPD4_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07050;old_locus_tag=YPD4_1197
NC_017154.1	Protein Homology	CDS	1527103	1527831	.	-	0	ID=cds1378;Parent=gene1403;Dbxref=Genbank:WP_002228008.1;Name=WP_002228008.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002228008.1;transl_table=11
NC_017154.1	RefSeq	gene	1528126	1528686	.	-	.	ID=gene1404;Name=YPD4_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07055;old_locus_tag=YPD4_1198
NC_017154.1	Protein Homology	CDS	1528126	1528686	.	-	0	ID=cds1379;Parent=gene1404;Dbxref=Genbank:WP_002211366.1;Name=WP_002211366.1;Note=catalyzes the interconversion of chorismate to prephenate;gbkey=CDS;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11
NC_017154.1	RefSeq	gene	1528856	1529431	.	-	.	ID=gene1405;Name=YPD4_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07060;old_locus_tag=YPD4_1199
NC_017154.1	Protein Homology	CDS	1528856	1529431	.	-	0	ID=cds1380;Parent=gene1405;Dbxref=Genbank:WP_002211365.1;Name=WP_002211365.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11
NC_017154.1	RefSeq	gene	1529528	1530535	.	-	.	ID=gene1406;Name=YPD4_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07065;old_locus_tag=YPD4_1200
NC_017154.1	Protein Homology	CDS	1529528	1530535	.	-	0	ID=cds1381;Parent=gene1406;Dbxref=Genbank:WP_002211364.1;Name=WP_002211364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211364.1;transl_table=11
NC_017154.1	RefSeq	gene	1530635	1532125	.	-	.	ID=gene1407;Name=YPD4_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07070;old_locus_tag=YPD4_1201
NC_017154.1	Protein Homology	CDS	1530635	1532125	.	-	0	ID=cds1382;Parent=gene1407;Dbxref=Genbank:WP_002211363.1;Name=WP_002211363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211363.1;transl_table=11
NC_017154.1	RefSeq	gene	1532122	1533141	.	-	.	ID=gene1408;Name=YPD4_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07075;old_locus_tag=YPD4_1202
NC_017154.1	Protein Homology	CDS	1532122	1533141	.	-	0	ID=cds1383;Parent=gene1408;Dbxref=Genbank:WP_002211362.1;Name=WP_002211362.1;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;gbkey=CDS;product=threonine aldolase;protein_id=WP_002211362.1;transl_table=11
NC_017154.1	RefSeq	gene	1533490	1535211	.	-	.	ID=gene1409;Name=YPD4_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07080;old_locus_tag=YPD4_1203
NC_017154.1	Protein Homology	CDS	1533490	1535211	.	-	0	ID=cds1384;Parent=gene1409;Dbxref=Genbank:WP_002211361.1;Name=WP_002211361.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=WP_002211361.1;transl_table=11
NC_017154.1	RefSeq	gene	1535355	1536377	.	-	.	ID=gene1410;Name=YPD4_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07085;old_locus_tag=YPD4_1204
NC_017154.1	Protein Homology	CDS	1535355	1536377	.	-	0	ID=cds1385;Parent=gene1410;Dbxref=Genbank:WP_002211360.1;Name=WP_002211360.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211360.1;transl_table=11
NC_017154.1	RefSeq	gene	1536491	1538143	.	-	.	ID=gene1411;Name=YPD4_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07090;old_locus_tag=YPD4_1205
NC_017154.1	Protein Homology	CDS	1536491	1538143	.	-	0	ID=cds1386;Parent=gene1411;Dbxref=Genbank:WP_002211359.1;Name=WP_002211359.1;gbkey=CDS;product=hydroxylamine reductase;protein_id=WP_002211359.1;transl_table=11
NC_017154.1	RefSeq	gene	1538345	1539241	.	-	.	ID=gene1412;Name=YPD4_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07095;old_locus_tag=YPD4_1206
NC_017154.1	Protein Homology	CDS	1538345	1539241	.	-	0	ID=cds1387;Parent=gene1412;Dbxref=Genbank:WP_002211358.1;Name=WP_002211358.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211358.1;transl_table=11
NC_017154.1	RefSeq	gene	1539594	1541261	.	+	.	ID=gene1413;Name=YPD4_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07100;old_locus_tag=YPD4_1207
NC_017154.1	Protein Homology	CDS	1539594	1541261	.	+	0	ID=cds1388;Parent=gene1413;Dbxref=Genbank:WP_002211356.1;Name=WP_002211356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211356.1;transl_table=11
NC_017154.1	RefSeq	gene	1541398	1542345	.	-	.	ID=gene1414;Name=YPD4_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07105;old_locus_tag=YPD4_1208
NC_017154.1	Protein Homology	CDS	1541398	1542345	.	-	0	ID=cds1389;Parent=gene1414;Dbxref=Genbank:WP_002211355.1;Name=WP_002211355.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211355.1;transl_table=11
NC_017154.1	RefSeq	gene	1542582	1543694	.	+	.	ID=gene1415;Name=YPD4_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07110;old_locus_tag=YPD4_1209
NC_017154.1	Protein Homology	CDS	1542582	1543694	.	+	0	ID=cds1390;Parent=gene1415;Dbxref=Genbank:WP_002216705.1;Name=WP_002216705.1;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=WP_002216705.1;transl_table=11
NC_017154.1	RefSeq	gene	1543694	1545643	.	+	.	ID=gene1416;Name=YPD4_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07115;old_locus_tag=YPD4_1210
NC_017154.1	Protein Homology	CDS	1543694	1545643	.	+	0	ID=cds1391;Parent=gene1416;Dbxref=Genbank:WP_002211351.1;Name=WP_002211351.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002211351.1;transl_table=11
NC_017154.1	RefSeq	gene	1545924	1546187	.	-	.	ID=gene1417;Name=YPD4_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07120
NC_017154.1	Protein Homology	CDS	1545924	1546187	.	-	0	ID=cds1392;Parent=gene1417;Dbxref=Genbank:WP_002211350.1;Name=WP_002211350.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211350.1;transl_table=11
NC_017154.1	RefSeq	gene	1546548	1546868	.	+	.	ID=gene1418;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=YPD4_RS07125;old_locus_tag=YPD4_1211
NC_017154.1	Protein Homology	CDS	1546548	1546868	.	+	0	ID=cds1393;Parent=gene1418;Dbxref=Genbank:WP_002211349.1;Name=WP_002211349.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_002211349.1;transl_table=11
NC_017154.1	RefSeq	gene	1546894	1549170	.	+	.	ID=gene1419;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=YPD4_RS07130;old_locus_tag=YPD4_1212
NC_017154.1	Protein Homology	CDS	1546894	1549170	.	+	0	ID=cds1394;Parent=gene1419;Dbxref=Genbank:WP_002211348.1;Name=WP_002211348.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_002211348.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1549310	1550032	.	+	.	ID=id121;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1549463	1549921	.	+	.	ID=gene1420;Name=YPD4_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07135;old_locus_tag=YPD4_1213
NC_017154.1	Protein Homology	CDS	1549463	1549921	.	+	0	ID=cds1395;Parent=gene1420;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	1550293	1550511	.	-	.	ID=gene1421;Name=YPD4_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07140
NC_017154.1	Protein Homology	CDS	1550293	1550511	.	-	0	ID=cds1396;Parent=gene1421;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11
NC_017154.1	RefSeq	gene	1550676	1551383	.	-	.	ID=gene1422;Name=YPD4_RS07145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS07145;pseudo=true
NC_017154.1	Protein Homology	CDS	1550676	1551383	.	-	0	ID=cds1397;Parent=gene1422;gbkey=CDS;product=leucyl/phenylalanyl-tRNA--protein transferase;pseudo=true;transl_except=(pos:complement(1551234..1551236)%2Caa:Other);transl_table=11
NC_017154.1	RefSeq	gene	1551602	1553326	.	-	.	ID=gene1423;Name=YPD4_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07150;old_locus_tag=YPD4_1215
NC_017154.1	Protein Homology	CDS	1551602	1553326	.	-	0	ID=cds1398;Parent=gene1423;Dbxref=Genbank:WP_002211344.1;Name=WP_002211344.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002211344.1;transl_table=11
NC_017154.1	RefSeq	gene	1553329	1555095	.	-	.	ID=gene1424;Name=YPD4_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07155;old_locus_tag=YPD4_1216
NC_017154.1	Protein Homology	CDS	1553329	1555095	.	-	0	ID=cds1399;Parent=gene1424;Dbxref=Genbank:WP_002217690.1;Name=WP_002217690.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002217690.1;transl_table=11
NC_017154.1	RefSeq	gene	1555312	1555449	.	+	.	ID=gene1425;Name=YPD4_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07160
NC_017154.1	Protein Homology	CDS	1555312	1555449	.	+	0	ID=cds1400;Parent=gene1425;Dbxref=Genbank:WP_002211342.1;Name=WP_002211342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211342.1;transl_table=11
NC_017154.1	RefSeq	gene	1555554	1556516	.	-	.	ID=gene1426;Name=YPD4_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07165;old_locus_tag=YPD4_1217
NC_017154.1	Protein Homology	CDS	1555554	1556516	.	-	0	ID=cds1401;Parent=gene1426;Dbxref=Genbank:WP_002211341.1;Name=WP_002211341.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_002211341.1;transl_table=11
NC_017154.1	RefSeq	gene	1557283	1557777	.	+	.	ID=gene1427;Name=YPD4_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07170;old_locus_tag=YPD4_1218
NC_017154.1	Protein Homology	CDS	1557283	1557777	.	+	0	ID=cds1402;Parent=gene1427;Dbxref=Genbank:WP_002211340.1;Name=WP_002211340.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002211340.1;transl_table=11
NC_017154.1	RefSeq	gene	1557900	1561817	.	+	.	ID=gene1428;Name=YPD4_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07175;old_locus_tag=YPD4_1219
NC_017154.1	Protein Homology	CDS	1557900	1561817	.	+	0	ID=cds1403;Parent=gene1428;Dbxref=Genbank:WP_002211339.1;Name=WP_002211339.1;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_002211339.1;transl_table=11
NC_017154.1	RefSeq	gene	1562010	1562618	.	+	.	ID=gene1429;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=YPD4_RS07180;old_locus_tag=YPD4_1220
NC_017154.1	Protein Homology	CDS	1562010	1562618	.	+	0	ID=cds1404;Parent=gene1429;Dbxref=Genbank:WP_002211338.1;Name=WP_002211338.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_002211338.1;transl_table=11
NC_017154.1	RefSeq	gene	1562629	1563972	.	+	.	ID=gene1430;Name=YPD4_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07185;old_locus_tag=YPD4_1221
NC_017154.1	Protein Homology	CDS	1562629	1563972	.	+	0	ID=cds1405;Parent=gene1430;Dbxref=Genbank:WP_002228009.1;Name=WP_002228009.1;gbkey=CDS;product=recombinase RarA;protein_id=WP_002228009.1;transl_table=11
NC_017154.1	RefSeq	gene	1564214	1565506	.	+	.	ID=gene1431;Name=YPD4_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07190;old_locus_tag=YPD4_1222
NC_017154.1	Protein Homology	CDS	1564214	1565506	.	+	0	ID=cds1406;Parent=gene1431;Dbxref=Genbank:WP_002211336.1;Name=WP_002211336.1;gbkey=CDS;product=serine--tRNA ligase;protein_id=WP_002211336.1;transl_table=11
NC_017154.1	RefSeq	gene	1565737	1566885	.	+	.	ID=gene1432;Name=YPD4_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07195;old_locus_tag=YPD4_1223
NC_017154.1	Protein Homology	CDS	1565737	1566885	.	+	0	ID=cds1407;Parent=gene1432;Dbxref=Genbank:WP_002211335.1;Name=WP_002211335.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211335.1;transl_table=11
NC_017154.1	RefSeq	gene	1567039	1567773	.	-	.	ID=gene1433;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=YPD4_RS07200;old_locus_tag=YPD4_1224
NC_017154.1	Protein Homology	CDS	1567039	1567773	.	-	0	ID=cds1408;Parent=gene1433;Dbxref=Genbank:WP_002211334.1;Name=WP_002211334.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating protein;protein_id=WP_002211334.1;transl_table=11
NC_017154.1	RefSeq	gene	1568760	1569434	.	+	.	ID=gene1434;Name=YPD4_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07205;old_locus_tag=YPD4_1225
NC_017154.1	Protein Homology	CDS	1568760	1569434	.	+	0	ID=cds1409;Parent=gene1434;Dbxref=Genbank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;product=LPS glycosyltransferase;protein_id=WP_002211333.1;transl_table=11
NC_017154.1	RefSeq	gene	1569552	1571833	.	-	.	ID=gene1435;Name=YPD4_RS07210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS07210;pseudo=true
NC_017154.1	Protein Homology	CDS	1569552	1571833	.	-	0	ID=cds1410;Parent=gene1435;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pyruvate formate-lyase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1571889	1572746	.	-	.	ID=gene1436;Name=YPD4_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07215;old_locus_tag=YPD4_1228
NC_017154.1	Protein Homology	CDS	1571889	1572746	.	-	0	ID=cds1411;Parent=gene1436;Dbxref=Genbank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11
NC_017154.1	RefSeq	gene	1573443	1575209	.	-	.	ID=gene1437;Name=YPD4_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07220;old_locus_tag=YPD4_1229
NC_017154.1	Protein Homology	CDS	1573443	1575209	.	-	0	ID=cds1412;Parent=gene1437;Dbxref=Genbank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211330.1;transl_table=11
NC_017154.1	RefSeq	gene	1575358	1576395	.	+	.	ID=gene1438;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=YPD4_RS07225;old_locus_tag=YPD4_1230
NC_017154.1	Protein Homology	CDS	1575358	1576395	.	+	0	ID=cds1413;Parent=gene1438;Dbxref=Genbank:WP_002211329.1;Name=WP_002211329.1;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis;gbkey=CDS;gene=ansB;product=L-asparaginase;protein_id=WP_002211329.1;transl_table=11
NC_017154.1	RefSeq	gene	1576664	1577758	.	+	.	ID=gene1439;Name=YPD4_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07230;old_locus_tag=YPD4_1231
NC_017154.1	Protein Homology	CDS	1576664	1577758	.	+	0	ID=cds1414;Parent=gene1439;Dbxref=Genbank:WP_002211328.1;Name=WP_002211328.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002211328.1;transl_table=11
NC_017154.1	RefSeq	gene	1577966	1579627	.	+	.	ID=gene1440;Name=YPD4_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07235;old_locus_tag=YPD4_1232
NC_017154.1	Protein Homology	CDS	1577966	1579627	.	+	0	ID=cds1415;Parent=gene1440;Dbxref=Genbank:WP_002220027.1;Name=WP_002220027.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220027.1;transl_table=11
NC_017154.1	RefSeq	gene	1579994	1581080	.	+	.	ID=gene1441;Name=YPD4_RS07240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS07240;old_locus_tag=YPD4_1233;pseudo=true
NC_017154.1	Protein Homology	CDS	1579994	1581080	.	+	0	ID=cds1416;Parent=gene1441;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphohydroxythreonine aminotransferase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1581243	1582529	.	+	.	ID=gene1442;Name=YPD4_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07245;old_locus_tag=YPD4_1234
NC_017154.1	Protein Homology	CDS	1581243	1582529	.	+	0	ID=cds1417;Parent=gene1442;Dbxref=Genbank:WP_002211325.1;Name=WP_002211325.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_002211325.1;transl_table=11
NC_017154.1	RefSeq	gene	1582842	1583534	.	+	.	ID=gene1443;Name=YPD4_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07250;old_locus_tag=YPD4_1235
NC_017154.1	Protein Homology	CDS	1582842	1583534	.	+	0	ID=cds1418;Parent=gene1443;Dbxref=Genbank:WP_002211324.1;Name=WP_002211324.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_002211324.1;transl_table=11
NC_017154.1	RefSeq	gene	1583708	1585381	.	+	.	ID=gene1444;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=YPD4_RS07255;old_locus_tag=YPD4_1236
NC_017154.1	Protein Homology	CDS	1583708	1585381	.	+	0	ID=cds1419;Parent=gene1444;Dbxref=Genbank:WP_002211323.1;Name=WP_002211323.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_002211323.1;transl_table=11
NC_017154.1	RefSeq	gene	1585442	1585726	.	+	.	ID=gene1445;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=YPD4_RS07260
NC_017154.1	Protein Homology	CDS	1585442	1585726	.	+	0	ID=cds1420;Parent=gene1445;Dbxref=Genbank:WP_002211322.1;Name=WP_002211322.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11
NC_017154.1	RefSeq	gene	1585710	1586012	.	-	.	ID=gene1446;Name=YPD4_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07265
NC_017154.1	Protein Homology	CDS	1585710	1586012	.	-	0	ID=cds1421;Parent=gene1446;Dbxref=Genbank:WP_002430095.1;Name=WP_002430095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430095.1;transl_table=11
NC_017154.1	RefSeq	gene	1586273	1588564	.	+	.	ID=gene1447;Name=YPD4_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07270;old_locus_tag=YPD4_1237
NC_017154.1	Protein Homology	CDS	1586273	1588564	.	+	0	ID=cds1422;Parent=gene1447;Dbxref=Genbank:WP_002211321.1;Name=WP_002211321.1;gbkey=CDS;product=competence protein ComEC;protein_id=WP_002211321.1;transl_table=11
NC_017154.1	RefSeq	gene	1588600	1590348	.	+	.	ID=gene1448;Name=YPD4_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07275;old_locus_tag=YPD4_1238
NC_017154.1	Protein Homology	CDS	1588600	1590348	.	+	0	ID=cds1423;Parent=gene1448;Dbxref=Genbank:WP_002211320.1;Name=WP_002211320.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid A export ATP-binding/permease MsbA;protein_id=WP_002211320.1;transl_table=11
NC_017154.1	RefSeq	gene	1590345	1591331	.	+	.	ID=gene1449;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=YPD4_RS07280;old_locus_tag=YPD4_1239
NC_017154.1	Protein Homology	CDS	1590345	1591331	.	+	0	ID=cds1424;Parent=gene1449;Dbxref=Genbank:WP_002211319.1;Name=WP_002211319.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_002211319.1;transl_table=11
NC_017154.1	RefSeq	gene	1591339	1592775	.	-	.	ID=gene1450;Name=YPD4_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07285;old_locus_tag=YPD4_1240
NC_017154.1	Protein Homology	CDS	1591339	1592775	.	-	0	ID=cds1425;Parent=gene1450;Dbxref=Genbank:WP_002216263.1;Name=WP_002216263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216263.1;transl_table=11
NC_017154.1	RefSeq	gene	1593059	1593256	.	-	.	ID=gene1451;Name=YPD4_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07290
NC_017154.1	Protein Homology	CDS	1593059	1593256	.	-	0	ID=cds1426;Parent=gene1451;Dbxref=Genbank:WP_015683832.1;Name=WP_015683832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683832.1;transl_table=11
NC_017154.1	RefSeq	gene	1593494	1593703	.	+	.	ID=gene1452;Name=YPD4_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07295
NC_017154.1	Protein Homology	CDS	1593494	1593703	.	+	0	ID=cds1427;Parent=gene1452;Dbxref=Genbank:WP_002211317.1;Name=WP_002211317.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11
NC_017154.1	RefSeq	gene	1594251	1594433	.	+	.	ID=gene1453;Name=YPD4_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07300
NC_017154.1	Protein Homology	CDS	1594251	1594433	.	+	0	ID=cds1428;Parent=gene1453;Dbxref=Genbank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211315.1;transl_table=11
NC_017154.1	RefSeq	gene	1594430	1595182	.	+	.	ID=gene1454;Name=YPD4_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07305;old_locus_tag=YPD4_1241
NC_017154.1	Protein Homology	CDS	1594430	1595182	.	+	0	ID=cds1429;Parent=gene1454;Dbxref=Genbank:WP_002211314.1;Name=WP_002211314.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11
NC_017154.1	RefSeq	gene	1595545	1596438	.	+	.	ID=gene1455;Name=YPD4_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07310;old_locus_tag=YPD4_1242
NC_017154.1	Protein Homology	CDS	1595545	1596438	.	+	0	ID=cds1430;Parent=gene1455;Dbxref=Genbank:WP_002211313.1;Name=WP_002211313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211313.1;transl_table=11
NC_017154.1	RefSeq	gene	1596814	1596966	.	-	.	ID=gene1456;Name=YPD4_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07315
NC_017154.1	Protein Homology	CDS	1596814	1596966	.	-	0	ID=cds1431;Parent=gene1456;Dbxref=Genbank:WP_002216252.1;Name=WP_002216252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216252.1;transl_table=11
NC_017154.1	RefSeq	gene	1597211	1597996	.	+	.	ID=gene1457;Name=YPD4_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07320;old_locus_tag=YPD4_1243
NC_017154.1	Protein Homology	CDS	1597211	1597996	.	+	0	ID=cds1432;Parent=gene1457;Dbxref=Genbank:WP_002211311.1;Name=WP_002211311.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_002211311.1;transl_table=11
NC_017154.1	RefSeq	gene	1597993	1599315	.	+	.	ID=gene1458;Name=YPD4_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07325;old_locus_tag=YPD4_1244
NC_017154.1	Protein Homology	CDS	1597993	1599315	.	+	0	ID=cds1433;Parent=gene1458;Dbxref=Genbank:WP_002211310.1;Name=WP_002211310.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=chromosome partition protein MukF;protein_id=WP_002211310.1;transl_table=11
NC_017154.1	RefSeq	gene	1599296	1600024	.	+	.	ID=gene1459;Name=YPD4_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07330;old_locus_tag=YPD4_1245
NC_017154.1	Protein Homology	CDS	1599296	1600024	.	+	0	ID=cds1434;Parent=gene1459;Dbxref=Genbank:WP_002211309.1;Name=WP_002211309.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=WP_002211309.1;transl_table=11
NC_017154.1	RefSeq	gene	1600021	1604478	.	+	.	ID=gene1460;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=YPD4_RS07335;old_locus_tag=YPD4_1246
NC_017154.1	Protein Homology	CDS	1600021	1604478	.	+	0	ID=cds1435;Parent=gene1460;Dbxref=Genbank:WP_002211308.1;Name=WP_002211308.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=chromosome partition protein MukB;protein_id=WP_002211308.1;transl_table=11
NC_017154.1	RefSeq	gene	1604522	1604704	.	+	.	ID=gene1461;Name=YPD4_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07340
NC_017154.1	Protein Homology	CDS	1604522	1604704	.	+	0	ID=cds1436;Parent=gene1461;Dbxref=Genbank:WP_002217988.1;Name=WP_002217988.1;gbkey=CDS;product=invasin;protein_id=WP_002217988.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1604543	1605264	.	+	.	ID=id122;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1604694	1605152	.	+	.	ID=gene1462;Name=YPD4_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07345;old_locus_tag=YPD4_1247
NC_017154.1	Protein Homology	CDS	1604694	1605152	.	+	0	ID=cds1437;Parent=gene1462;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	1605436	1607291	.	+	.	ID=gene1463;Name=YPD4_RS07350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS07350;pseudo=true
NC_017154.1	Protein Homology	CDS	1605436	1607291	.	+	0	ID=cds1438;Parent=gene1463;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptidase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1607515	1608063	.	+	.	ID=gene1464;Name=YPD4_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07355;old_locus_tag=YPD4_1250
NC_017154.1	Protein Homology	CDS	1607515	1608063	.	+	0	ID=cds1439;Parent=gene1464;Dbxref=Genbank:WP_002211305.1;Name=WP_002211305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211305.1;transl_table=11
NC_017154.1	RefSeq	gene	1608124	1608770	.	+	.	ID=gene1465;Name=YPD4_RS07360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS07360;pseudo=true
NC_017154.1	Protein Homology	CDS	1608124	1608770	.	+	0	ID=cds1440;Parent=gene1465;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	1608969	1609140	.	+	.	ID=id123;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1609194	1610384	.	-	.	ID=gene1466;Name=YPD4_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07365;old_locus_tag=YPD4_1252
NC_017154.1	Protein Homology	CDS	1609194	1610384	.	-	0	ID=cds1441;Parent=gene1466;Dbxref=Genbank:WP_002211303.1;Name=WP_002211303.1;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002211303.1;transl_table=11
NC_017154.1	RefSeq	gene	1610641	1611723	.	-	.	ID=gene1467;Name=YPD4_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07370;old_locus_tag=YPD4_1253
NC_017154.1	Protein Homology	CDS	1610641	1611723	.	-	0	ID=cds1442;Parent=gene1467;Dbxref=Genbank:WP_002211302.1;Name=WP_002211302.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;product=porin;protein_id=WP_002211302.1;transl_table=11
NC_017154.1	RefSeq	gene	1612021	1613421	.	-	.	ID=gene1468;Name=YPD4_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07375;old_locus_tag=YPD4_1254
NC_017154.1	Protein Homology	CDS	1612021	1613421	.	-	0	ID=cds1443;Parent=gene1468;Dbxref=Genbank:WP_002211301.1;Name=WP_002211301.1;gbkey=CDS;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11
NC_017154.1	RefSeq	gene	1613920	1615125	.	-	.	ID=gene1469;Name=YPD4_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07380;old_locus_tag=YPD4_1255
NC_017154.1	Protein Homology	CDS	1613920	1615125	.	-	0	ID=cds1444;Parent=gene1469;Dbxref=Genbank:WP_002228013.1;Name=WP_002228013.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=WP_002228013.1;transl_table=11
NC_017154.1	RefSeq	gene	1615841	1618455	.	+	.	ID=gene1470;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=pseudogene;locus_tag=YPD4_RS07385;pseudo=true
NC_017154.1	Protein Homology	CDS	1615841	1618455	.	+	0	ID=cds1445;Parent=gene1470;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=pepN;product=aminopeptidase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1619091	1620101	.	+	.	ID=gene1471;Name=YPD4_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07390;old_locus_tag=YPD4_1258
NC_017154.1	Protein Homology	CDS	1619091	1620101	.	+	0	ID=cds1446;Parent=gene1471;Dbxref=Genbank:WP_002211296.1;Name=WP_002211296.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002211296.1;transl_table=11
NC_017154.1	RefSeq	gene	1620284	1620835	.	+	.	ID=gene1472;Name=YPD4_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07395;old_locus_tag=YPD4_1259
NC_017154.1	Protein Homology	CDS	1620284	1620835	.	+	0	ID=cds1447;Parent=gene1472;Dbxref=Genbank:WP_002211295.1;Name=WP_002211295.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_002211295.1;transl_table=11
NC_017154.1	RefSeq	gene	1620861	1621970	.	-	.	ID=gene1473;Name=YPD4_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07400;old_locus_tag=YPD4_1260
NC_017154.1	Protein Homology	CDS	1620861	1621970	.	-	0	ID=cds1448;Parent=gene1473;Dbxref=Genbank:WP_002363919.1;Name=WP_002363919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002363919.1;transl_table=11
NC_017154.1	RefSeq	gene	1622073	1624193	.	+	.	ID=gene1474;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=YPD4_RS07405;old_locus_tag=YPD4_1261
NC_017154.1	Protein Homology	CDS	1622073	1624193	.	+	0	ID=cds1449;Parent=gene1474;Dbxref=Genbank:WP_002211293.1;Name=WP_002211293.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=ribosomal RNA large subunit methyltransferase K/L;protein_id=WP_002211293.1;transl_table=11
NC_017154.1	RefSeq	gene	1624199	1626112	.	+	.	ID=gene1475;Name=YPD4_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07410;old_locus_tag=YPD4_1262
NC_017154.1	Protein Homology	CDS	1624199	1626112	.	+	0	ID=cds1450;Parent=gene1475;Dbxref=Genbank:WP_002211292.1;Name=WP_002211292.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211292.1;transl_table=11
NC_017154.1	RefSeq	gene	1626310	1627527	.	+	.	ID=gene1476;Name=YPD4_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07415;old_locus_tag=YPD4_1263
NC_017154.1	Protein Homology	CDS	1626310	1627527	.	+	0	ID=cds1451;Parent=gene1476;Dbxref=Genbank:WP_002354008.1;Name=WP_002354008.1;gbkey=CDS;product=paraquat-inducible protein A;protein_id=WP_002354008.1;transl_table=11
NC_017154.1	RefSeq	gene	1627514	1629166	.	+	.	ID=gene1477;Name=YPD4_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07420;old_locus_tag=YPD4_1264
NC_017154.1	Protein Homology	CDS	1627514	1629166	.	+	0	ID=cds1452;Parent=gene1477;Dbxref=Genbank:WP_002211290.1;Name=WP_002211290.1;gbkey=CDS;product=paraquat-inducible protein B;protein_id=WP_002211290.1;transl_table=11
NC_017154.1	RefSeq	gene	1629163	1629741	.	+	.	ID=gene1478;Name=YPD4_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07425;old_locus_tag=YPD4_1265
NC_017154.1	Protein Homology	CDS	1629163	1629741	.	+	0	ID=cds1453;Parent=gene1478;Dbxref=Genbank:WP_002211289.1;Name=WP_002211289.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211289.1;transl_table=11
NC_017154.1	RefSeq	gene	1629790	1629930	.	+	.	ID=gene1479;Name=YPD4_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07430
NC_017154.1	Protein Homology	CDS	1629790	1629930	.	+	0	ID=cds1454;Parent=gene1479;Dbxref=Genbank:WP_002217596.1;Name=WP_002217596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217596.1;transl_table=11
NC_017154.1	RefSeq	gene	1630011	1630178	.	+	.	ID=gene1480;Name=YPD4_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07435
NC_017154.1	Protein Homology	CDS	1630011	1630178	.	+	0	ID=cds1455;Parent=gene1480;Dbxref=Genbank:WP_002228015.1;Name=WP_002228015.1;gbkey=CDS;product=ribosome modulation factor;protein_id=WP_002228015.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1630226	1630946	.	+	.	ID=id124;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1630231	1630386	.	+	.	ID=gene1481;Name=YPD4_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07440
NC_017154.1	Protein Homology	CDS	1630231	1630386	.	+	0	ID=cds1456;Parent=gene1481;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	1630376	1630834	.	+	.	ID=gene1482;Name=YPD4_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07445;old_locus_tag=YPD4_1266
NC_017154.1	Protein Homology	CDS	1630376	1630834	.	+	0	ID=cds1457;Parent=gene1482;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	1630951	1631925	.	-	.	ID=gene1483;Name=YPD4_RS07450;end_range=1631925,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS07450;old_locus_tag=YPD4_1267;partial=true;pseudo=true
NC_017154.1	Protein Homology	CDS	1630951	1631925	.	-	0	ID=cds1458;Parent=gene1483;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;end_range=1631925,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=3-oxoacyl-ACP synthase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	1631920	1633886	.	+	.	ID=id125;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1631995	1632765	.	-	.	ID=gene1484;Name=YPD4_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07455;old_locus_tag=YPD4_1268
NC_017154.1	Protein Homology	CDS	1631995	1632765	.	-	0	ID=cds1459;Parent=gene1484;Dbxref=Genbank:WP_002215630.1;Name=WP_002215630.1;gbkey=CDS;product=transposase;protein_id=WP_002215630.1;transl_table=11
NC_017154.1	RefSeq	gene	1632774	1633796	.	-	.	ID=gene1485;Name=YPD4_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07460;old_locus_tag=YPD4_1269
NC_017154.1	Protein Homology	CDS	1632774	1633796	.	-	0	ID=cds1460;Parent=gene1485;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	1633810	1634184	.	-	.	ID=gene1486;Name=YPD4_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07465;old_locus_tag=YPD4_1270
NC_017154.1	Protein Homology	CDS	1633810	1634184	.	-	0	ID=cds1461;Parent=gene1486;Dbxref=Genbank:WP_002211287.1;Name=WP_002211287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211287.1;transl_table=11
NC_017154.1	RefSeq	gene	1634430	1634618	.	+	.	ID=gene1487;Name=YPD4_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07470
NC_017154.1	Protein Homology	CDS	1634430	1634618	.	+	0	ID=cds1462;Parent=gene1487;Dbxref=Genbank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211286.1;transl_table=11
NC_017154.1	RefSeq	gene	1634884	1635402	.	-	.	ID=gene1488;Name=YPD4_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07475;old_locus_tag=YPD4_1271
NC_017154.1	Protein Homology	CDS	1634884	1635402	.	-	0	ID=cds1463;Parent=gene1488;Dbxref=Genbank:WP_002220006.1;Name=WP_002220006.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_002220006.1;transl_table=11
NC_017154.1	RefSeq	gene	1635471	1637222	.	-	.	ID=gene1489;Name=YPD4_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07480;old_locus_tag=YPD4_1272
NC_017154.1	Protein Homology	CDS	1635471	1637222	.	-	0	ID=cds1464;Parent=gene1489;Dbxref=Genbank:WP_002224683.1;Name=WP_002224683.1;gbkey=CDS;product=ATP-dependent protease;protein_id=WP_002224683.1;transl_table=11
NC_017154.1	RefSeq	gene	1637433	1637888	.	+	.	ID=gene1490;Name=YPD4_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07485;old_locus_tag=YPD4_1273
NC_017154.1	Protein Homology	CDS	1637433	1637888	.	+	0	ID=cds1465;Parent=gene1490;Dbxref=Genbank:WP_002226586.1;Name=WP_002226586.1;gbkey=CDS;product=macrodomain Ter protein;protein_id=WP_002226586.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1637945	1638669	.	+	.	ID=id126;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1638057	1638515	.	-	.	ID=gene1491;Name=YPD4_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07490;old_locus_tag=YPD4_1274
NC_017154.1	Protein Homology	CDS	1638057	1638515	.	-	0	ID=cds1466;Parent=gene1491;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	1638505	1638660	.	-	.	ID=gene1492;Name=YPD4_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07495
NC_017154.1	Protein Homology	CDS	1638505	1638660	.	-	0	ID=cds1467;Parent=gene1492;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	1638705	1639766	.	-	.	ID=gene1493;Name=YPD4_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07500;old_locus_tag=YPD4_1275
NC_017154.1	Protein Homology	CDS	1638705	1639766	.	-	0	ID=cds1468;Parent=gene1493;Dbxref=Genbank:WP_002213066.1;Name=WP_002213066.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=WP_002213066.1;transl_table=11
NC_017154.1	RefSeq	gene	1640124	1640630	.	-	.	ID=gene1494;Name=YPD4_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07505;old_locus_tag=YPD4_1276
NC_017154.1	Protein Homology	CDS	1640124	1640630	.	-	0	ID=cds1469;Parent=gene1494;Dbxref=Genbank:WP_002213065.1;Name=WP_002213065.1;gbkey=CDS;product=cell division inhibitor SulA;protein_id=WP_002213065.1;transl_table=11
NC_017154.1	RefSeq	gene	1640859	1641494	.	+	.	ID=gene1495;Name=YPD4_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07510;old_locus_tag=YPD4_1277
NC_017154.1	Protein Homology	CDS	1640859	1641494	.	+	0	ID=cds1470;Parent=gene1495;Dbxref=Genbank:WP_002213064.1;Name=WP_002213064.1;gbkey=CDS;product=DNA transformation protein tfoX;protein_id=WP_002213064.1;transl_table=11
NC_017154.1	RefSeq	gene	1641596	1643734	.	-	.	ID=gene1496;Name=YPD4_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07515;old_locus_tag=YPD4_1278
NC_017154.1	Protein Homology	CDS	1641596	1643734	.	-	0	ID=cds1471;Parent=gene1496;Dbxref=Genbank:WP_002213063.1;Name=WP_002213063.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213063.1;transl_table=11
NC_017154.1	RefSeq	gene	1643764	1644210	.	-	.	ID=gene1497;Name=YPD4_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07520;old_locus_tag=YPD4_1279
NC_017154.1	Protein Homology	CDS	1643764	1644210	.	-	0	ID=cds1472;Parent=gene1497;Dbxref=Genbank:WP_002213062.1;Name=WP_002213062.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213062.1;transl_table=11
NC_017154.1	RefSeq	gene	1644404	1646458	.	+	.	ID=gene1498;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=YPD4_RS07525;old_locus_tag=YPD4_1280
NC_017154.1	Protein Homology	CDS	1644404	1646458	.	+	0	ID=cds1473;Parent=gene1498;Dbxref=Genbank:WP_002221095.1;Name=WP_002221095.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=WP_002221095.1;transl_table=11
NC_017154.1	RefSeq	gene	1646519	1646983	.	-	.	ID=gene1499;Name=YPD4_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07530;old_locus_tag=YPD4_1281
NC_017154.1	Protein Homology	CDS	1646519	1646983	.	-	0	ID=cds1474;Parent=gene1499;Dbxref=Genbank:WP_002213060.1;Name=WP_002213060.1;gbkey=CDS;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11
NC_017154.1	RefSeq	gene	1647162	1647842	.	-	.	ID=gene1500;Name=YPD4_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07535;old_locus_tag=YPD4_1282
NC_017154.1	Protein Homology	CDS	1647162	1647842	.	-	0	ID=cds1475;Parent=gene1500;Dbxref=Genbank:WP_002213058.1;Name=WP_002213058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213058.1;transl_table=11
NC_017154.1	RefSeq	gene	1648159	1648575	.	+	.	ID=gene1501;Name=YPD4_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07540;old_locus_tag=YPD4_1283
NC_017154.1	Protein Homology	CDS	1648159	1648575	.	+	0	ID=cds1476;Parent=gene1501;Dbxref=Genbank:WP_002213056.1;Name=WP_002213056.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213056.1;transl_table=11
NC_017154.1	RefSeq	gene	1648684	1649001	.	-	.	ID=gene1502;Name=YPD4_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07545;old_locus_tag=YPD4_1284
NC_017154.1	Protein Homology	CDS	1648684	1649001	.	-	0	ID=cds1477;Parent=gene1502;Dbxref=Genbank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_002213054.1;transl_table=11
NC_017154.1	RefSeq	gene	1649062	1650252	.	-	.	ID=gene1503;Name=YPD4_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07550;old_locus_tag=YPD4_1285
NC_017154.1	Protein Homology	CDS	1649062	1650252	.	-	0	ID=cds1478;Parent=gene1503;Dbxref=Genbank:WP_002213052.1;Name=WP_002213052.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase I;protein_id=WP_002213052.1;transl_table=11
NC_017154.1	RefSeq	gene	1650346	1650624	.	+	.	ID=gene1504;Name=YPD4_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07555
NC_017154.1	Protein Homology	CDS	1650346	1650624	.	+	0	ID=cds1479;Parent=gene1504;Dbxref=Genbank:WP_002213049.1;Name=WP_002213049.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11
NC_017154.1	RefSeq	gene	1650676	1651005	.	-	.	ID=gene1505;Name=YPD4_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07560;old_locus_tag=YPD4_1286
NC_017154.1	Protein Homology	CDS	1650676	1651005	.	-	0	ID=cds1480;Parent=gene1505;Dbxref=Genbank:WP_002213046.1;Name=WP_002213046.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11
NC_017154.1	RefSeq	gene	1651246	1651333	.	+	.	ID=gene1506;Name=YPD4_RS07565;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS07565;old_locus_tag=YPD4_t19
NC_017154.1	tRNAscan-SE	tRNA	1651246	1651333	.	+	.	ID=rna24;Parent=gene1506;anticodon=(pos:1651280..1651282);gbkey=tRNA;product=tRNA-Ser
NC_017154.1	tRNAscan-SE	exon	1651246	1651333	.	+	.	ID=id127;Parent=rna24;anticodon=(pos:1651280..1651282);gbkey=tRNA;product=tRNA-Ser
NC_017154.1	RefSeq	gene	1651753	1652040	.	+	.	ID=gene1507;Name=YPD4_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07570
NC_017154.1	Protein Homology	CDS	1651753	1652040	.	+	0	ID=cds1481;Parent=gene1507;Dbxref=Genbank:WP_002228572.1;Name=WP_002228572.1;gbkey=CDS;product=integrase;protein_id=WP_002228572.1;transl_table=11
NC_017154.1	RefSeq	gene	1652410	1652766	.	+	.	ID=gene1508;Name=YPD4_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07575;old_locus_tag=YPD4_1287
NC_017154.1	Protein Homology	CDS	1652410	1652766	.	+	0	ID=cds1482;Parent=gene1508;Dbxref=Genbank:WP_002214713.1;Name=WP_002214713.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002214713.1;transl_table=11
NC_017154.1	RefSeq	gene	1652800	1653051	.	+	.	ID=gene1509;Name=YPD4_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07580
NC_017154.1	Protein Homology	CDS	1652800	1653051	.	+	0	ID=cds1483;Parent=gene1509;Dbxref=Genbank:WP_002354019.1;Name=WP_002354019.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002354019.1;transl_table=11
NC_017154.1	RefSeq	gene	1653066	1654217	.	+	.	ID=gene1510;Name=YPD4_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07585;old_locus_tag=YPD4_1288
NC_017154.1	Protein Homology	CDS	1653066	1654217	.	+	0	ID=cds1484;Parent=gene1510;Dbxref=Genbank:WP_002358281.1;Name=WP_002358281.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002358281.1;transl_table=11
NC_017154.1	RefSeq	gene	1654651	1657068	.	-	.	ID=gene1511;Name=YPD4_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07590;old_locus_tag=YPD4_1289
NC_017154.1	Protein Homology	CDS	1654651	1657068	.	-	0	ID=cds1485;Parent=gene1511;Dbxref=Genbank:WP_002213039.1;Name=WP_002213039.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002213039.1;transl_table=11
NC_017154.1	RefSeq	gene	1657222	1657968	.	-	.	ID=gene1512;Name=YPD4_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07595;old_locus_tag=YPD4_1290
NC_017154.1	Protein Homology	CDS	1657222	1657968	.	-	0	ID=cds1486;Parent=gene1512;Dbxref=Genbank:WP_002213038.1;Name=WP_002213038.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213038.1;transl_table=11
NC_017154.1	RefSeq	gene	1658699	1658917	.	+	.	ID=gene1513;Name=YPD4_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07600
NC_017154.1	Protein Homology	CDS	1658699	1658917	.	+	0	ID=cds1487;Parent=gene1513;Dbxref=Genbank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11
NC_017154.1	RefSeq	gene	1659181	1659705	.	+	.	ID=gene1514;Name=YPD4_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07605;old_locus_tag=YPD4_1291
NC_017154.1	Protein Homology	CDS	1659181	1659705	.	+	0	ID=cds1488;Parent=gene1514;Dbxref=Genbank:WP_002213034.1;Name=WP_002213034.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002213034.1;transl_table=11
NC_017154.1	RefSeq	gene	1659695	1660978	.	+	.	ID=gene1515;Name=YPD4_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07610;old_locus_tag=YPD4_1292
NC_017154.1	Protein Homology	CDS	1659695	1660978	.	+	0	ID=cds1489;Parent=gene1515;Dbxref=Genbank:WP_002213032.1;Name=WP_002213032.1;gbkey=CDS;product=beta-ketoacyl-ACP synthase;protein_id=WP_002213032.1;transl_table=11
NC_017154.1	RefSeq	gene	1660980	1661717	.	+	.	ID=gene1516;Name=YPD4_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07615;old_locus_tag=YPD4_1293
NC_017154.1	Protein Homology	CDS	1660980	1661717	.	+	0	ID=cds1490;Parent=gene1516;Dbxref=Genbank:WP_002213030.1;Name=WP_002213030.1;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=WP_002213030.1;transl_table=11
NC_017154.1	RefSeq	gene	1661733	1662971	.	+	.	ID=gene1517;Name=YPD4_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07620;old_locus_tag=YPD4_1294
NC_017154.1	Protein Homology	CDS	1661733	1662971	.	+	0	ID=cds1491;Parent=gene1517;Dbxref=Genbank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002213028.1;transl_table=11
NC_017154.1	RefSeq	gene	1662964	1663683	.	+	.	ID=gene1518;Name=YPD4_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07625;old_locus_tag=YPD4_1295
NC_017154.1	Protein Homology	CDS	1662964	1663683	.	+	0	ID=cds1492;Parent=gene1518;Dbxref=Genbank:WP_002213026.1;Name=WP_002213026.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213026.1;transl_table=11
NC_017154.1	RefSeq	gene	1663685	1664437	.	+	.	ID=gene1519;Name=YPD4_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07630;old_locus_tag=YPD4_1296
NC_017154.1	Protein Homology	CDS	1663685	1664437	.	+	0	ID=cds1493;Parent=gene1519;Dbxref=Genbank:WP_002213025.1;Name=WP_002213025.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213025.1;transl_table=11
NC_017154.1	RefSeq	gene	1664440	1665228	.	+	.	ID=gene1520;Name=YPD4_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07635;old_locus_tag=YPD4_1297
NC_017154.1	Protein Homology	CDS	1664440	1665228	.	+	0	ID=cds1494;Parent=gene1520;Dbxref=Genbank:WP_002213024.1;Name=WP_002213024.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002213024.1;transl_table=11
NC_017154.1	RefSeq	gene	1665423	1665755	.	+	.	ID=gene1521;Name=YPD4_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07640;old_locus_tag=YPD4_1298
NC_017154.1	Protein Homology	CDS	1665423	1665755	.	+	0	ID=cds1495;Parent=gene1521;Dbxref=Genbank:WP_002213021.1;Name=WP_002213021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213021.1;transl_table=11
NC_017154.1	RefSeq	gene	1665793	1666041	.	+	.	ID=gene1522;Name=YPD4_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07645
NC_017154.1	Protein Homology	CDS	1665793	1666041	.	+	0	ID=cds1496;Parent=gene1522;Dbxref=Genbank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002213017.1;transl_table=11
NC_017154.1	RefSeq	gene	1666140	1666988	.	+	.	ID=gene1523;Name=YPD4_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07650;old_locus_tag=YPD4_1299
NC_017154.1	Protein Homology	CDS	1666140	1666988	.	+	0	ID=cds1497;Parent=gene1523;Dbxref=Genbank:WP_002213016.1;Name=WP_002213016.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002213016.1;transl_table=11
NC_017154.1	RefSeq	gene	1667145	1667312	.	+	.	ID=gene1524;Name=YPD4_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07655
NC_017154.1	Protein Homology	CDS	1667145	1667312	.	+	0	ID=cds1498;Parent=gene1524;Dbxref=Genbank:WP_002214708.1;Name=WP_002214708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214708.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1667550	1674424	.	+	.	ID=id128;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1667977	1668477	.	+	.	ID=gene1525;Name=YPD4_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07660;old_locus_tag=YPD4_1300
NC_017154.1	Protein Homology	CDS	1667977	1668477	.	+	0	ID=cds1499;Parent=gene1525;Dbxref=Genbank:WP_002213014.1;Name=WP_002213014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213014.1;transl_table=11
NC_017154.1	RefSeq	gene	1668520	1670070	.	+	.	ID=gene1526;Name=YPD4_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07665;old_locus_tag=YPD4_1301
NC_017154.1	Protein Homology	CDS	1668520	1670070	.	+	0	ID=cds1500;Parent=gene1526;Dbxref=Genbank:WP_002214707.1;Name=WP_002214707.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214707.1;transl_table=11
NC_017154.1	RefSeq	gene	1670082	1671434	.	+	.	ID=gene1527;Name=YPD4_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07670;old_locus_tag=YPD4_1302
NC_017154.1	Protein Homology	CDS	1670082	1671434	.	+	0	ID=cds1501;Parent=gene1527;Dbxref=Genbank:WP_002213011.1;Name=WP_002213011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213011.1;transl_table=11
NC_017154.1	RefSeq	gene	1671431	1672117	.	+	.	ID=gene1528;Name=YPD4_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07675;old_locus_tag=YPD4_1303
NC_017154.1	Protein Homology	CDS	1671431	1672117	.	+	0	ID=cds1502;Parent=gene1528;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11
NC_017154.1	RefSeq	gene	1672117	1673853	.	+	.	ID=gene1529;Name=YPD4_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07680;old_locus_tag=YPD4_1304
NC_017154.1	Protein Homology	CDS	1672117	1673853	.	+	0	ID=cds1503;Parent=gene1529;Dbxref=Genbank:WP_002228049.1;Name=WP_002228049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228049.1;transl_table=11
NC_017154.1	RefSeq	gene	1673857	1674348	.	+	.	ID=gene1530;Name=YPD4_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07685;old_locus_tag=YPD4_1305
NC_017154.1	Protein Homology	CDS	1673857	1674348	.	+	0	ID=cds1504;Parent=gene1530;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1674747	1676451	.	+	.	ID=id129;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1674766	1677414	.	+	.	ID=gene1531;Name=YPD4_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07690;old_locus_tag=YPD4_1306
NC_017154.1	Protein Homology	CDS	1674766	1677414	.	+	0	ID=cds1505;Parent=gene1531;Dbxref=Genbank:WP_002210013.1;Name=WP_002210013.1;gbkey=CDS;product=ATPase;protein_id=WP_002210013.1;transl_table=11
NC_017154.1	RefSeq	gene	1677411	1679759	.	+	.	ID=gene1532;Name=YPD4_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07695;old_locus_tag=YPD4_1307
NC_017154.1	Protein Homology	CDS	1677411	1679759	.	+	0	ID=cds1506;Parent=gene1532;Dbxref=Genbank:WP_015683911.1;Name=WP_015683911.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_015683911.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1679118	1679674	.	+	.	ID=id130;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1679774	1681996	.	+	.	ID=gene1533;Name=YPD4_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07700;old_locus_tag=YPD4_1308
NC_017154.1	Protein Homology	CDS	1679774	1681996	.	+	0	ID=cds1507;Parent=gene1533;Dbxref=Genbank:WP_002210011.1;Name=WP_002210011.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_002210011.1;transl_table=11
NC_017154.1	RefSeq	gene	1682140	1682496	.	+	.	ID=gene1534;Name=YPD4_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07705
NC_017154.1	Protein Homology	CDS	1682140	1682496	.	+	0	ID=cds1508;Parent=gene1534;Dbxref=Genbank:WP_016257642.1;Name=WP_016257642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016257642.1;transl_table=11
NC_017154.1	RefSeq	gene	1682690	1682884	.	+	.	ID=gene1535;Name=YPD4_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07710
NC_017154.1	Protein Homology	CDS	1682690	1682884	.	+	0	ID=cds1509;Parent=gene1535;Dbxref=Genbank:WP_002216110.1;Name=WP_002216110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216110.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1682852	1683485	.	+	.	ID=id131;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1682913	1683188	.	+	.	ID=gene1536;Name=YPD4_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07715
NC_017154.1	Protein Homology	CDS	1682913	1683188	.	+	0	ID=cds1510;Parent=gene1536;Dbxref=Genbank:WP_002216108.1;Name=WP_002216108.1;gbkey=CDS;product=transposase;protein_id=WP_002216108.1;transl_table=11
NC_017154.1	RefSeq	gene	1683242	1683577	.	+	.	ID=gene1537;Name=YPD4_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07720
NC_017154.1	Protein Homology	CDS	1683242	1683577	.	+	0	ID=cds1511;Parent=gene1537;Dbxref=Genbank:WP_002216107.1;Name=WP_002216107.1;gbkey=CDS;product=transposase;protein_id=WP_002216107.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1683499	1686226	.	+	.	ID=id132;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1684109	1684744	.	+	.	ID=gene1538;Name=YPD4_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07725;old_locus_tag=YPD4_1309
NC_017154.1	Protein Homology	CDS	1684109	1684744	.	+	0	ID=cds1512;Parent=gene1538;Dbxref=Genbank:WP_002210010.1;Name=WP_002210010.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210010.1;transl_table=11
NC_017154.1	RefSeq	gene	1684760	1687060	.	+	.	ID=gene1539;Name=YPD4_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07730;old_locus_tag=YPD4_1310
NC_017154.1	Protein Homology	CDS	1684760	1687060	.	+	0	ID=cds1513;Parent=gene1539;Dbxref=Genbank:WP_015683912.1;Name=WP_015683912.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683912.1;transl_table=11
NC_017154.1	RefSeq	gene	1687057	1687830	.	+	.	ID=gene1540;Name=YPD4_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07735;old_locus_tag=YPD4_1311
NC_017154.1	Protein Homology	CDS	1687057	1687830	.	+	0	ID=cds1514;Parent=gene1540;Dbxref=Genbank:WP_002211930.1;Name=WP_002211930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211930.1;transl_table=11
NC_017154.1	RefSeq	gene	1687984	1688244	.	+	.	ID=gene1541;Name=YPD4_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07740
NC_017154.1	Protein Homology	CDS	1687984	1688244	.	+	0	ID=cds1515;Parent=gene1541;Dbxref=Genbank:WP_002211931.1;Name=WP_002211931.1;gbkey=CDS;product=multidrug ABC transporter ATPase;protein_id=WP_002211931.1;transl_table=11
NC_017154.1	RefSeq	gene	1688260	1690443	.	+	.	ID=gene1542;Name=YPD4_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07745;old_locus_tag=YPD4_1312
NC_017154.1	Protein Homology	CDS	1688260	1690443	.	+	0	ID=cds1516;Parent=gene1542;Dbxref=Genbank:WP_002211932.1;Name=WP_002211932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211932.1;transl_table=11
NC_017154.1	RefSeq	gene	1690616	1691086	.	+	.	ID=gene1543;Name=YPD4_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07750
NC_017154.1	Protein Homology	CDS	1690616	1691086	.	+	0	ID=cds1517;Parent=gene1543;Dbxref=Genbank:WP_002214564.1;Name=WP_002214564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214564.1;transl_table=11
NC_017154.1	RefSeq	gene	1691819	1692139	.	-	.	ID=gene1544;Name=YPD4_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07755;old_locus_tag=YPD4_1313
NC_017154.1	Protein Homology	CDS	1691819	1692139	.	-	0	ID=cds1518;Parent=gene1544;Dbxref=Genbank:WP_002214561.1;Name=WP_002214561.1;gbkey=CDS;product=transposase;protein_id=WP_002214561.1;transl_table=11
NC_017154.1	RefSeq	gene	1693251	1694483	.	+	.	ID=gene1545;Name=YPD4_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07760;old_locus_tag=YPD4_1314
NC_017154.1	Protein Homology	CDS	1693251	1694483	.	+	0	ID=cds1519;Parent=gene1545;Dbxref=Genbank:WP_002211935.1;Name=WP_002211935.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211935.1;transl_table=11
NC_017154.1	RefSeq	gene	1694480	1697902	.	+	.	ID=gene1546;Name=YPD4_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07765;old_locus_tag=YPD4_1315
NC_017154.1	Protein Homology	CDS	1694480	1697902	.	+	0	ID=cds1520;Parent=gene1546;Dbxref=Genbank:WP_002211936.1;Name=WP_002211936.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_002211936.1;transl_table=11
NC_017154.1	RefSeq	gene	1697946	1699547	.	+	.	ID=gene1547;Name=YPD4_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07770;old_locus_tag=YPD4_1316
NC_017154.1	Protein Homology	CDS	1697946	1699547	.	+	0	ID=cds1521;Parent=gene1547;Dbxref=Genbank:WP_002211937.1;Name=WP_002211937.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211937.1;transl_table=11
NC_017154.1	RefSeq	gene	1699565	1700623	.	+	.	ID=gene1548;Name=YPD4_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07775;old_locus_tag=YPD4_1317
NC_017154.1	Protein Homology	CDS	1699565	1700623	.	+	0	ID=cds1522;Parent=gene1548;Dbxref=Genbank:WP_002211938.1;Name=WP_002211938.1;gbkey=CDS;product=PAAR domain protein;protein_id=WP_002211938.1;transl_table=11
NC_017154.1	RefSeq	gene	1700638	1701093	.	+	.	ID=gene1549;Name=YPD4_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07780;old_locus_tag=YPD4_1318
NC_017154.1	Protein Homology	CDS	1700638	1701093	.	+	0	ID=cds1523;Parent=gene1549;Dbxref=Genbank:WP_002211939.1;Name=WP_002211939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211939.1;transl_table=11
NC_017154.1	RefSeq	gene	1701314	1703077	.	+	.	ID=gene1550;Name=YPD4_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07785;old_locus_tag=YPD4_1319
NC_017154.1	Protein Homology	CDS	1701314	1703077	.	+	0	ID=cds1524;Parent=gene1550;Dbxref=Genbank:WP_002211940.1;Name=WP_002211940.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002211940.1;transl_table=11
NC_017154.1	RefSeq	gene	1703041	1704126	.	+	.	ID=gene1551;Name=YPD4_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07790;old_locus_tag=YPD4_1320
NC_017154.1	Protein Homology	CDS	1703041	1704126	.	+	0	ID=cds1525;Parent=gene1551;Dbxref=Genbank:WP_002211941.1;Name=WP_002211941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211941.1;transl_table=11
NC_017154.1	RefSeq	gene	1704101	1704682	.	+	.	ID=gene1552;Name=YPD4_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07795;old_locus_tag=YPD4_1321
NC_017154.1	Protein Homology	CDS	1704101	1704682	.	+	0	ID=cds1526;Parent=gene1552;Dbxref=Genbank:WP_002214552.1;Name=WP_002214552.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214552.1;transl_table=11
NC_017154.1	RefSeq	gene	1704682	1705134	.	+	.	ID=gene1553;Name=YPD4_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07800;old_locus_tag=YPD4_1322
NC_017154.1	Protein Homology	CDS	1704682	1705134	.	+	0	ID=cds1527;Parent=gene1553;Dbxref=Genbank:WP_002211943.1;Name=WP_002211943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211943.1;transl_table=11
NC_017154.1	RefSeq	gene	1705159	1706526	.	+	.	ID=gene1554;Name=YPD4_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07805;old_locus_tag=YPD4_1323
NC_017154.1	Protein Homology	CDS	1705159	1706526	.	+	0	ID=cds1528;Parent=gene1554;Dbxref=Genbank:WP_002211944.1;Name=WP_002211944.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211944.1;transl_table=11
NC_017154.1	RefSeq	gene	1706738	1707361	.	-	.	ID=gene1555;Name=YPD4_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07810;old_locus_tag=YPD4_1324
NC_017154.1	Protein Homology	CDS	1706738	1707361	.	-	0	ID=cds1529;Parent=gene1555;Dbxref=Genbank:WP_002211945.1;Name=WP_002211945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211945.1;transl_table=11
NC_017154.1	RefSeq	gene	1708068	1709639	.	+	.	ID=gene1556;Name=YPD4_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07815;old_locus_tag=YPD4_1325
NC_017154.1	Protein Homology	CDS	1708068	1709639	.	+	0	ID=cds1530;Parent=gene1556;Dbxref=Genbank:WP_002354043.1;Name=WP_002354043.1;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_002354043.1;transl_table=11
NC_017154.1	RefSeq	gene	1709867	1710520	.	+	.	ID=gene1557;Name=YPD4_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07820;old_locus_tag=YPD4_1326
NC_017154.1	Protein Homology	CDS	1709867	1710520	.	+	0	ID=cds1531;Parent=gene1557;Dbxref=Genbank:WP_002211947.1;Name=WP_002211947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211947.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1710527	1711847	.	+	.	ID=id133;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1710564	1711772	.	-	.	ID=gene1558;Name=YPD4_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07825;old_locus_tag=YPD4_1327
NC_017154.1	Protein Homology	CDS	1710564	1711772	.	-	0	ID=cds1532;Parent=gene1558;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	1711908	1712678	.	-	.	ID=gene1559;Name=YPD4_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07830;old_locus_tag=YPD4_1328
NC_017154.1	Protein Homology	CDS	1711908	1712678	.	-	0	ID=cds1533;Parent=gene1559;Dbxref=Genbank:WP_002211948.1;Name=WP_002211948.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_002211948.1;transl_table=11
NC_017154.1	RefSeq	gene	1712680	1713954	.	-	.	ID=gene1560;Name=YPD4_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07835;old_locus_tag=YPD4_1329
NC_017154.1	Protein Homology	CDS	1712680	1713954	.	-	0	ID=cds1534;Parent=gene1560;Dbxref=Genbank:WP_002211949.1;Name=WP_002211949.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=WP_002211949.1;transl_table=11
NC_017154.1	RefSeq	gene	1714489	1715799	.	-	.	ID=gene1561;Name=YPD4_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07840;old_locus_tag=YPD4_1330
NC_017154.1	Protein Homology	CDS	1714489	1715799	.	-	0	ID=cds1535;Parent=gene1561;Dbxref=Genbank:WP_002211950.1;Name=WP_002211950.1;gbkey=CDS;product=radical SAM/SPASM domain-containing protein;protein_id=WP_002211950.1;transl_table=11
NC_017154.1	RefSeq	gene	1715809	1716477	.	-	.	ID=gene1562;Name=YPD4_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07845;old_locus_tag=YPD4_1331
NC_017154.1	Protein Homology	CDS	1715809	1716477	.	-	0	ID=cds1536;Parent=gene1562;Dbxref=Genbank:WP_015683913.1;Name=WP_015683913.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_015683913.1;transl_table=11
NC_017154.1	RefSeq	gene	1716479	1717741	.	-	.	ID=gene1563;Name=YPD4_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07850;old_locus_tag=YPD4_1332
NC_017154.1	Protein Homology	CDS	1716479	1717741	.	-	0	ID=cds1537;Parent=gene1563;Dbxref=Genbank:WP_002211952.1;Name=WP_002211952.1;gbkey=CDS;product=RND transporter;protein_id=WP_002211952.1;transl_table=11
NC_017154.1	RefSeq	gene	1717743	1720103	.	-	.	ID=gene1564;Name=YPD4_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07855;old_locus_tag=YPD4_1333
NC_017154.1	Protein Homology	CDS	1717743	1720103	.	-	0	ID=cds1538;Parent=gene1564;Dbxref=Genbank:WP_002215886.1;Name=WP_002215886.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215886.1;transl_table=11
NC_017154.1	RefSeq	gene	1720187	1720387	.	-	.	ID=gene1565;Name=YPD4_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07860
NC_017154.1	Protein Homology	CDS	1720187	1720387	.	-	0	ID=cds1539;Parent=gene1565;Dbxref=Genbank:WP_002211954.1;Name=WP_002211954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211954.1;transl_table=11
NC_017154.1	RefSeq	gene	1720656	1721498	.	-	.	ID=gene1566;Name=YPD4_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07870;old_locus_tag=YPD4_1334
NC_017154.1	Protein Homology	CDS	1720656	1721498	.	-	0	ID=cds1540;Parent=gene1566;Dbxref=Genbank:WP_002211956.1;Name=WP_002211956.1;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=WP_002211956.1;transl_table=11
NC_017154.1	RefSeq	gene	1721519	1722658	.	-	.	ID=gene1567;Name=YPD4_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07875;old_locus_tag=YPD4_1335
NC_017154.1	Protein Homology	CDS	1721519	1722658	.	-	0	ID=cds1541;Parent=gene1567;Dbxref=Genbank:WP_002211957.1;Name=WP_002211957.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_002211957.1;transl_table=11
NC_017154.1	RefSeq	gene	1722932	1723801	.	-	.	ID=gene1568;Name=YPD4_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07880;old_locus_tag=YPD4_1336
NC_017154.1	Protein Homology	CDS	1722932	1723801	.	-	0	ID=cds1542;Parent=gene1568;Dbxref=Genbank:WP_002211958.1;Name=WP_002211958.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211958.1;transl_table=11
NC_017154.1	RefSeq	gene	1723937	1725088	.	+	.	ID=gene1569;Name=YPD4_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07885;old_locus_tag=YPD4_1337
NC_017154.1	Protein Homology	CDS	1723937	1725088	.	+	0	ID=cds1543;Parent=gene1569;Dbxref=Genbank:WP_002211959.1;Name=WP_002211959.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211959.1;transl_table=11
NC_017154.1	RefSeq	gene	1725272	1725934	.	+	.	ID=gene1570;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=YPD4_RS07890;old_locus_tag=YPD4_1338
NC_017154.1	Protein Homology	CDS	1725272	1725934	.	+	0	ID=cds1544;Parent=gene1570;Dbxref=Genbank:WP_002211960.1;Name=WP_002211960.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase 1;protein_id=WP_002211960.1;transl_table=11
NC_017154.1	RefSeq	gene	1725989	1727155	.	+	.	ID=gene1571;Name=YPD4_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07895;old_locus_tag=YPD4_1339
NC_017154.1	Protein Homology	CDS	1725989	1727155	.	+	0	ID=cds1545;Parent=gene1571;Dbxref=Genbank:WP_002211961.1;Name=WP_002211961.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211961.1;transl_table=11
NC_017154.1	RefSeq	gene	1727903	1728895	.	+	.	ID=gene1572;Name=YPD4_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07900;old_locus_tag=YPD4_1340
NC_017154.1	Protein Homology	CDS	1727903	1728895	.	+	0	ID=cds1546;Parent=gene1572;Dbxref=Genbank:WP_002211963.1;Name=WP_002211963.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;product=methyl-galactoside ABC transporter substrate-binding protein;protein_id=WP_002211963.1;transl_table=11
NC_017154.1	RefSeq	gene	1729125	1730645	.	+	.	ID=gene1573;Name=YPD4_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07905;old_locus_tag=YPD4_1341
NC_017154.1	Protein Homology	CDS	1729125	1730645	.	+	0	ID=cds1547;Parent=gene1573;Dbxref=Genbank:WP_002211964.1;Name=WP_002211964.1;gbkey=CDS;product=galactose/methyl galactoside import ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11
NC_017154.1	RefSeq	gene	1730666	1731676	.	+	.	ID=gene1574;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=YPD4_RS07910;old_locus_tag=YPD4_1342
NC_017154.1	Protein Homology	CDS	1730666	1731676	.	+	0	ID=cds1548;Parent=gene1574;Dbxref=Genbank:WP_002211965.1;Name=WP_002211965.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter;protein_id=WP_002211965.1;transl_table=11
NC_017154.1	RefSeq	gene	1732121	1732858	.	-	.	ID=gene1575;Name=YPD4_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07915;old_locus_tag=YPD4_1343
NC_017154.1	Protein Homology	CDS	1732121	1732858	.	-	0	ID=cds1549;Parent=gene1575;Dbxref=Genbank:WP_002211966.1;Name=WP_002211966.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=vancomycin high temperature exclusion protein;protein_id=WP_002211966.1;transl_table=11
NC_017154.1	RefSeq	gene	1733139	1734836	.	-	.	ID=gene1576;Name=YPD4_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07920;old_locus_tag=YPD4_1344
NC_017154.1	Protein Homology	CDS	1733139	1734836	.	-	0	ID=cds1550;Parent=gene1576;Dbxref=Genbank:WP_002211968.1;Name=WP_002211968.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11
NC_017154.1	RefSeq	gene	1735192	1736076	.	-	.	ID=gene1577;Name=YPD4_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07925;old_locus_tag=YPD4_1345
NC_017154.1	Protein Homology	CDS	1735192	1736076	.	-	0	ID=cds1551;Parent=gene1577;Dbxref=Genbank:WP_002211969.1;Name=WP_002211969.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_002211969.1;transl_table=11
NC_017154.1	RefSeq	gene	1736402	1737097	.	-	.	ID=gene1578;Name=YPD4_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07930;old_locus_tag=YPD4_1346
NC_017154.1	Protein Homology	CDS	1736402	1737097	.	-	0	ID=cds1552;Parent=gene1578;Dbxref=Genbank:WP_002211970.1;Name=WP_002211970.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211970.1;transl_table=11
NC_017154.1	RefSeq	gene	1737094	1737501	.	-	.	ID=gene1579;Name=YPD4_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07935;old_locus_tag=YPD4_1347
NC_017154.1	Protein Homology	CDS	1737094	1737501	.	-	0	ID=cds1553;Parent=gene1579;Dbxref=Genbank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211971.1;transl_table=11
NC_017154.1	RefSeq	gene	1737743	1738924	.	-	.	ID=gene1580;Name=YPD4_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07940;old_locus_tag=YPD4_1348
NC_017154.1	Protein Homology	CDS	1737743	1738924	.	-	0	ID=cds1554;Parent=gene1580;Dbxref=Genbank:WP_002211973.1;Name=WP_002211973.1;gbkey=CDS;product=multidrug resistance protein;protein_id=WP_002211973.1;transl_table=11
NC_017154.1	RefSeq	gene	1739257	1740510	.	-	.	ID=gene1581;Name=YPD4_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07945;old_locus_tag=YPD4_1349
NC_017154.1	Protein Homology	CDS	1739257	1740510	.	-	0	ID=cds1555;Parent=gene1581;Dbxref=Genbank:WP_002211974.1;Name=WP_002211974.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211974.1;transl_table=11
NC_017154.1	RefSeq	gene	1740528	1741604	.	-	.	ID=gene1582;Name=YPD4_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07950;old_locus_tag=YPD4_1350
NC_017154.1	Protein Homology	CDS	1740528	1741604	.	-	0	ID=cds1556;Parent=gene1582;Dbxref=Genbank:WP_002211975.1;Name=WP_002211975.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002211975.1;transl_table=11
NC_017154.1	RefSeq	gene	1742302	1742964	.	+	.	ID=gene1583;Name=YPD4_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07955;old_locus_tag=YPD4_1351
NC_017154.1	Protein Homology	CDS	1742302	1742964	.	+	0	ID=cds1557;Parent=gene1583;Dbxref=Genbank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228565.1;transl_table=11
NC_017154.1	RefSeq	gene	1743004	1743192	.	+	.	ID=gene1584;Name=YPD4_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07960
NC_017154.1	Protein Homology	CDS	1743004	1743192	.	+	0	ID=cds1558;Parent=gene1584;Dbxref=Genbank:WP_011171814.1;Name=WP_011171814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171814.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1743028	1743751	.	+	.	ID=id134;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1743182	1743640	.	+	.	ID=gene1585;Name=YPD4_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07965;old_locus_tag=YPD4_1352
NC_017154.1	Protein Homology	CDS	1743182	1743640	.	+	0	ID=cds1559;Parent=gene1585;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	1743804	1745831	.	-	.	ID=gene1586;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=YPD4_RS07970;old_locus_tag=YPD4_1353
NC_017154.1	Protein Homology	CDS	1743804	1745831	.	-	0	ID=cds1560;Parent=gene1586;Dbxref=Genbank:WP_002211870.1;Name=WP_002211870.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_002211870.1;transl_table=11
NC_017154.1	RefSeq	gene	1746096	1747208	.	+	.	ID=gene1587;Name=YPD4_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07975;old_locus_tag=YPD4_1354
NC_017154.1	Protein Homology	CDS	1746096	1747208	.	+	0	ID=cds1561;Parent=gene1587;Dbxref=Genbank:WP_002211871.1;Name=WP_002211871.1;gbkey=CDS;product=ATPase;protein_id=WP_002211871.1;transl_table=11
NC_017154.1	RefSeq	gene	1747453	1748094	.	+	.	ID=gene1588;Name=YPD4_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07980;old_locus_tag=YPD4_1355
NC_017154.1	Protein Homology	CDS	1747453	1748094	.	+	0	ID=cds1562;Parent=gene1588;Dbxref=Genbank:WP_002211872.1;Name=WP_002211872.1;gbkey=CDS;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11
NC_017154.1	RefSeq	gene	1748199	1748780	.	+	.	ID=gene1589;Name=YPD4_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07985;old_locus_tag=YPD4_1356
NC_017154.1	Protein Homology	CDS	1748199	1748780	.	+	0	ID=cds1563;Parent=gene1589;Dbxref=Genbank:WP_002211873.1;Name=WP_002211873.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_002211873.1;transl_table=11
NC_017154.1	RefSeq	gene	1748967	1750823	.	+	.	ID=gene1590;Name=YPD4_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07990;old_locus_tag=YPD4_1357
NC_017154.1	Protein Homology	CDS	1748967	1750823	.	+	0	ID=cds1564;Parent=gene1590;Dbxref=Genbank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;product=membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11
NC_017154.1	RefSeq	gene	1750968	1752581	.	-	.	ID=gene1591;Name=YPD4_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS07995;old_locus_tag=YPD4_1358
NC_017154.1	Protein Homology	CDS	1750968	1752581	.	-	0	ID=cds1565;Parent=gene1591;Dbxref=Genbank:WP_002223436.1;Name=WP_002223436.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223436.1;transl_table=11
NC_017154.1	RefSeq	gene	1753023	1753802	.	+	.	ID=gene1592;Name=YPD4_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08000;old_locus_tag=YPD4_1359
NC_017154.1	Protein Homology	CDS	1753023	1753802	.	+	0	ID=cds1566;Parent=gene1592;Dbxref=Genbank:WP_002211876.1;Name=WP_002211876.1;gbkey=CDS;product=iron reductase;protein_id=WP_002211876.1;transl_table=11
NC_017154.1	RefSeq	gene	1753954	1755501	.	+	.	ID=gene1593;Name=YPD4_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08005;old_locus_tag=YPD4_1360
NC_017154.1	Protein Homology	CDS	1753954	1755501	.	+	0	ID=cds1567;Parent=gene1593;Dbxref=Genbank:WP_002211877.1;Name=WP_002211877.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmH;protein_id=WP_002211877.1;transl_table=11
NC_017154.1	RefSeq	gene	1755536	1756834	.	+	.	ID=gene1594;Name=YPD4_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08010;old_locus_tag=YPD4_1361
NC_017154.1	Protein Homology	CDS	1755536	1756834	.	+	0	ID=cds1568;Parent=gene1594;Dbxref=Genbank:WP_002211878.1;Name=WP_002211878.1;gbkey=CDS;product=lysine N6-hydroxylase/L-ornithine N5-oxygenase family;protein_id=WP_002211878.1;transl_table=11
NC_017154.1	RefSeq	gene	1756834	1757412	.	+	.	ID=gene1595;Name=YPD4_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08015;old_locus_tag=YPD4_1362
NC_017154.1	Protein Homology	CDS	1756834	1757412	.	+	0	ID=cds1569;Parent=gene1595;Dbxref=Genbank:WP_002214999.1;Name=WP_002214999.1;gbkey=CDS;product=siderophore biosynthesis protein;protein_id=WP_002214999.1;transl_table=11
NC_017154.1	RefSeq	gene	1757409	1759253	.	+	.	ID=gene1596;Name=YPD4_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08020;old_locus_tag=YPD4_1363
NC_017154.1	Protein Homology	CDS	1757409	1759253	.	+	0	ID=cds1570;Parent=gene1596;Dbxref=Genbank:WP_002215001.1;Name=WP_002215001.1;gbkey=CDS;product=siderophore biosynthetic enzyme;protein_id=WP_002215001.1;transl_table=11
NC_017154.1	RefSeq	gene	1759362	1760180	.	-	.	ID=gene1597;Name=YPD4_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08025;old_locus_tag=YPD4_1364
NC_017154.1	Protein Homology	CDS	1759362	1760180	.	-	0	ID=cds1571;Parent=gene1597;Dbxref=Genbank:WP_002211879.1;Name=WP_002211879.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;product=ABC transporter;protein_id=WP_002211879.1;transl_table=11
NC_017154.1	RefSeq	gene	1760207	1761247	.	-	.	ID=gene1598;Name=YPD4_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08030;old_locus_tag=YPD4_1365
NC_017154.1	Protein Homology	CDS	1760207	1761247	.	-	0	ID=cds1572;Parent=gene1598;Dbxref=Genbank:WP_002211880.1;Name=WP_002211880.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211880.1;transl_table=11
NC_017154.1	RefSeq	gene	1761234	1762274	.	-	.	ID=gene1599;Name=YPD4_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08035;old_locus_tag=YPD4_1366
NC_017154.1	Protein Homology	CDS	1761234	1762274	.	-	0	ID=cds1573;Parent=gene1599;Dbxref=Genbank:WP_002211881.1;Name=WP_002211881.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211881.1;transl_table=11
NC_017154.1	RefSeq	gene	1762271	1763350	.	-	.	ID=gene1600;Name=YPD4_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08040;old_locus_tag=YPD4_1367
NC_017154.1	Protein Homology	CDS	1762271	1763350	.	-	0	ID=cds1574;Parent=gene1600;Dbxref=Genbank:WP_002211882.1;Name=WP_002211882.1;gbkey=CDS;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_002211882.1;transl_table=11
NC_017154.1	RefSeq	gene	1763440	1765701	.	-	.	ID=gene1601;Name=YPD4_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08045;old_locus_tag=YPD4_1368
NC_017154.1	Protein Homology	CDS	1763440	1765701	.	-	0	ID=cds1575;Parent=gene1601;Dbxref=Genbank:WP_002211883.1;Name=WP_002211883.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211883.1;transl_table=11
NC_017154.1	RefSeq	gene	1765914	1767728	.	-	.	ID=gene1602;Name=YPD4_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08050;old_locus_tag=YPD4_1369
NC_017154.1	Protein Homology	CDS	1765914	1767728	.	-	0	ID=cds1576;Parent=gene1602;Dbxref=Genbank:WP_002211884.1;Name=WP_002211884.1;gbkey=CDS;product=siderophore biosynthesis protein%2C IucA/IucC family;protein_id=WP_002211884.1;transl_table=11
NC_017154.1	RefSeq	gene	1768674	1769564	.	+	.	ID=gene1603;Name=YPD4_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08055;old_locus_tag=YPD4_1370
NC_017154.1	Protein Homology	CDS	1768674	1769564	.	+	0	ID=cds1577;Parent=gene1603;Dbxref=Genbank:WP_002211886.1;Name=WP_002211886.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211886.1;transl_table=11
NC_017154.1	RefSeq	gene	1769648	1770541	.	+	.	ID=gene1604;Name=YPD4_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08060;old_locus_tag=YPD4_1371
NC_017154.1	Protein Homology	CDS	1769648	1770541	.	+	0	ID=cds1578;Parent=gene1604;Dbxref=Genbank:WP_002211887.1;Name=WP_002211887.1;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211887.1;transl_table=11
NC_017154.1	RefSeq	gene	1770927	1772336	.	+	.	ID=gene1605;Name=YPD4_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08065;old_locus_tag=YPD4_1372
NC_017154.1	Protein Homology	CDS	1770927	1772336	.	+	0	ID=cds1579;Parent=gene1605;Dbxref=Genbank:WP_002211888.1;Name=WP_002211888.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_002211888.1;transl_table=11
NC_017154.1	RefSeq	gene	1772536	1773150	.	-	.	ID=gene1606;Name=YPD4_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08070;old_locus_tag=YPD4_1373
NC_017154.1	Protein Homology	CDS	1772536	1773150	.	-	0	ID=cds1580;Parent=gene1606;Dbxref=Genbank:WP_002211889.1;Name=WP_002211889.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisIE;protein_id=WP_002211889.1;transl_table=11
NC_017154.1	RefSeq	gene	1773144	1773920	.	-	.	ID=gene1607;Name=YPD4_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08075;old_locus_tag=YPD4_1374
NC_017154.1	Protein Homology	CDS	1773144	1773920	.	-	0	ID=cds1581;Parent=gene1607;Dbxref=Genbank:WP_002211890.1;Name=WP_002211890.1;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_002211890.1;transl_table=11
NC_017154.1	RefSeq	gene	1773902	1774639	.	-	.	ID=gene1608;Name=YPD4_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08080;old_locus_tag=YPD4_1375
NC_017154.1	Protein Homology	CDS	1773902	1774639	.	-	0	ID=cds1582;Parent=gene1608;Dbxref=Genbank:WP_002211891.1;Name=WP_002211891.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_002211891.1;transl_table=11
NC_017154.1	RefSeq	gene	1774645	1775235	.	-	.	ID=gene1609;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=YPD4_RS08085;old_locus_tag=YPD4_1376
NC_017154.1	Protein Homology	CDS	1774645	1775235	.	-	0	ID=cds1583;Parent=gene1609;Dbxref=Genbank:WP_002211892.1;Name=WP_002211892.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11
NC_017154.1	RefSeq	gene	1775235	1776302	.	-	.	ID=gene1610;Name=YPD4_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08090;old_locus_tag=YPD4_1377
NC_017154.1	Protein Homology	CDS	1775235	1776302	.	-	0	ID=cds1584;Parent=gene1610;Dbxref=Genbank:WP_002211893.1;Name=WP_002211893.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisB;protein_id=WP_002211893.1;transl_table=11
NC_017154.1	RefSeq	gene	1776299	1777447	.	-	.	ID=gene1611;Name=YPD4_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08095;old_locus_tag=YPD4_1378
NC_017154.1	Protein Homology	CDS	1776299	1777447	.	-	0	ID=cds1585;Parent=gene1611;Dbxref=Genbank:WP_002211894.1;Name=WP_002211894.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_002211894.1;transl_table=11
NC_017154.1	RefSeq	gene	1777450	1778781	.	-	.	ID=gene1612;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=YPD4_RS08100;old_locus_tag=YPD4_1379
NC_017154.1	Protein Homology	CDS	1777450	1778781	.	-	0	ID=cds1586;Parent=gene1612;Dbxref=Genbank:WP_002211895.1;Name=WP_002211895.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_002211895.1;transl_table=11
NC_017154.1	RefSeq	gene	1778785	1779684	.	-	.	ID=gene1613;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=YPD4_RS08105;old_locus_tag=YPD4_1380
NC_017154.1	Protein Homology	CDS	1778785	1779684	.	-	0	ID=cds1587;Parent=gene1613;Dbxref=Genbank:WP_002211896.1;Name=WP_002211896.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11
NC_017154.1	RefSeq	gene	1780390	1781217	.	+	.	ID=gene1614;Name=YPD4_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08110;old_locus_tag=YPD4_1381
NC_017154.1	Protein Homology	CDS	1780390	1781217	.	+	0	ID=cds1588;Parent=gene1614;Dbxref=Genbank:WP_002211898.1;Name=WP_002211898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211898.1;transl_table=11
NC_017154.1	RefSeq	gene	1781372	1781806	.	-	.	ID=gene1615;Name=YPD4_RS08115;gbkey=Gene;gene_biotype=other;locus_tag=YPD4_RS08115;old_locus_tag=YPD4_1382
NC_017154.1	RefSeq	repeat_region	1781715	1781821	.	+	.	ID=id135;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1782051	1783046	.	-	.	ID=gene1616;Name=YPD4_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08120;old_locus_tag=YPD4_1383
NC_017154.1	Protein Homology	CDS	1782051	1783046	.	-	0	ID=cds1589;Parent=gene1616;Dbxref=Genbank:WP_002211900.1;Name=WP_002211900.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211900.1;transl_table=11
NC_017154.1	RefSeq	gene	1783043	1783732	.	-	.	ID=gene1617;Name=YPD4_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08125;old_locus_tag=YPD4_1384
NC_017154.1	Protein Homology	CDS	1783043	1783732	.	-	0	ID=cds1590;Parent=gene1617;Dbxref=Genbank:WP_002216310.1;Name=WP_002216310.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216310.1;transl_table=11
NC_017154.1	RefSeq	gene	1783690	1784583	.	-	.	ID=gene1618;Name=YPD4_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08130;old_locus_tag=YPD4_1385
NC_017154.1	Protein Homology	CDS	1783690	1784583	.	-	0	ID=cds1591;Parent=gene1618;Dbxref=Genbank:WP_002216311.1;Name=WP_002216311.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216311.1;transl_table=11
NC_017154.1	RefSeq	gene	1784869	1785960	.	+	.	ID=gene1619;Name=YPD4_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08135;old_locus_tag=YPD4_1386
NC_017154.1	Protein Homology	CDS	1784869	1785960	.	+	0	ID=cds1592;Parent=gene1619;Dbxref=Genbank:WP_002216312.1;Name=WP_002216312.1;Note=member of the iron-containing alcohol dehydrogenase family;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216312.1;transl_table=11
NC_017154.1	RefSeq	gene	1786215	1786430	.	+	.	ID=gene1620;Name=YPD4_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08140
NC_017154.1	Protein Homology	CDS	1786215	1786430	.	+	0	ID=cds1593;Parent=gene1620;Dbxref=Genbank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11
NC_017154.1	RefSeq	gene	1786420	1787811	.	+	.	ID=gene1621;Name=YPD4_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08145;old_locus_tag=YPD4_1387
NC_017154.1	Protein Homology	CDS	1786420	1787811	.	+	0	ID=cds1594;Parent=gene1621;Dbxref=Genbank:WP_002211902.1;Name=WP_002211902.1;gbkey=CDS;product=putrescine/spermidine ABC transporter;protein_id=WP_002211902.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1788306	1788513	.	+	.	ID=id136;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1788548	1789978	.	-	.	ID=gene1622;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=YPD4_RS08150;old_locus_tag=YPD4_1388
NC_017154.1	Protein Homology	CDS	1788548	1789978	.	-	0	ID=cds1595;Parent=gene1622;Dbxref=Genbank:WP_002211904.1;Name=WP_002211904.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=WP_002211904.1;transl_table=11
NC_017154.1	RefSeq	gene	1790271	1791380	.	+	.	ID=gene1623;Name=YPD4_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08155;old_locus_tag=YPD4_1389
NC_017154.1	Protein Homology	CDS	1790271	1791380	.	+	0	ID=cds1596;Parent=gene1623;Dbxref=Genbank:WP_002211905.1;Name=WP_002211905.1;gbkey=CDS;product=thiamine biosynthesis protein ThiF;protein_id=WP_002211905.1;transl_table=11
NC_017154.1	RefSeq	gene	1791814	1792130	.	+	.	ID=gene1624;Name=YPD4_RS08160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS08160;pseudo=true
NC_017154.1	Protein Homology	CDS	1791814	1792130	.	+	0	ID=cds1597;Parent=gene1624;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	1792428	1793747	.	+	.	ID=id137;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1792501	1793709	.	+	.	ID=gene1625;Name=YPD4_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08165;old_locus_tag=YPD4_1390
NC_017154.1	Protein Homology	CDS	1792501	1793709	.	+	0	ID=cds1598;Parent=gene1625;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	1793672	1796824	.	-	.	ID=gene1626;Name=YPD4_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08170;old_locus_tag=YPD4_1391
NC_017154.1	Protein Homology	CDS	1793672	1796824	.	-	0	ID=cds1599;Parent=gene1626;Dbxref=Genbank:WP_002216388.1;Name=WP_002216388.1;gbkey=CDS;product=adhesin;protein_id=WP_002216388.1;transl_table=11
NC_017154.1	RefSeq	gene	1797849	1799153	.	+	.	ID=gene1627;Name=YPD4_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08175;old_locus_tag=YPD4_1392
NC_017154.1	Protein Homology	CDS	1797849	1799153	.	+	0	ID=cds1600;Parent=gene1627;Dbxref=Genbank:WP_002211911.1;Name=WP_002211911.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211911.1;transl_table=11
NC_017154.1	RefSeq	gene	1799162	1799584	.	-	.	ID=gene1628;Name=YPD4_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08180;old_locus_tag=YPD4_1393
NC_017154.1	Protein Homology	CDS	1799162	1799584	.	-	0	ID=cds1601;Parent=gene1628;Dbxref=Genbank:WP_002211912.1;Name=WP_002211912.1;gbkey=CDS;product=thiol-disulfide oxidoreductase;protein_id=WP_002211912.1;transl_table=11
NC_017154.1	RefSeq	gene	1800012	1800752	.	+	.	ID=gene1629;Name=YPD4_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08185;old_locus_tag=YPD4_1394
NC_017154.1	Protein Homology	CDS	1800012	1800752	.	+	0	ID=cds1602;Parent=gene1629;Dbxref=Genbank:WP_002216393.1;Name=WP_002216393.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216393.1;transl_table=11
NC_017154.1	RefSeq	gene	1800800	1801642	.	+	.	ID=gene1630;Name=YPD4_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08190;old_locus_tag=YPD4_1395
NC_017154.1	Protein Homology	CDS	1800800	1801642	.	+	0	ID=cds1603;Parent=gene1630;Dbxref=Genbank:WP_002211916.1;Name=WP_002211916.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211916.1;transl_table=11
NC_017154.1	RefSeq	gene	1801674	1802951	.	+	.	ID=gene1631;Name=YPD4_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08195;old_locus_tag=YPD4_1396
NC_017154.1	Protein Homology	CDS	1801674	1802951	.	+	0	ID=cds1604;Parent=gene1631;Dbxref=Genbank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;product=fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11
NC_017154.1	RefSeq	gene	1803248	1804393	.	+	.	ID=gene1632;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=YPD4_RS08200;old_locus_tag=YPD4_1397
NC_017154.1	Protein Homology	CDS	1803248	1804393	.	+	0	ID=cds1605;Parent=gene1632;Dbxref=Genbank:WP_002211919.1;Name=WP_002211919.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=lactate dehydrogenase;protein_id=WP_002211919.1;transl_table=11
NC_017154.1	RefSeq	gene	1804598	1805965	.	-	.	ID=gene1633;Name=YPD4_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08205;old_locus_tag=YPD4_1398
NC_017154.1	Protein Homology	CDS	1804598	1805965	.	-	0	ID=cds1606;Parent=gene1633;Dbxref=Genbank:WP_002211920.1;Name=WP_002211920.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_002211920.1;transl_table=11
NC_017154.1	RefSeq	gene	1806292	1807689	.	+	.	ID=gene1634;Name=YPD4_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08210;old_locus_tag=YPD4_1399
NC_017154.1	Protein Homology	CDS	1806292	1807689	.	+	0	ID=cds1607;Parent=gene1634;Dbxref=Genbank:WP_002354070.1;Name=WP_002354070.1;gbkey=CDS;product=MATE family multidrug exporter;protein_id=WP_002354070.1;transl_table=11
NC_017154.1	RefSeq	gene	1807717	1809057	.	-	.	ID=gene1635;Name=YPD4_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08215;old_locus_tag=YPD4_1400
NC_017154.1	Protein Homology	CDS	1807717	1809057	.	-	0	ID=cds1608;Parent=gene1635;Dbxref=Genbank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002211922.1;transl_table=11
NC_017154.1	RefSeq	gene	1809093	1809974	.	-	.	ID=gene1636;Name=YPD4_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08220;old_locus_tag=YPD4_1401
NC_017154.1	Protein Homology	CDS	1809093	1809974	.	-	0	ID=cds1609;Parent=gene1636;Dbxref=Genbank:WP_002211923.1;Name=WP_002211923.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211923.1;transl_table=11
NC_017154.1	RefSeq	gene	1810551	1811246	.	+	.	ID=gene1637;Name=YPD4_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08225;old_locus_tag=YPD4_1402
NC_017154.1	Protein Homology	CDS	1810551	1811246	.	+	0	ID=cds1610;Parent=gene1637;Dbxref=Genbank:WP_002217591.1;Name=WP_002217591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217591.1;transl_table=11
NC_017154.1	RefSeq	gene	1811336	1811875	.	+	.	ID=gene1638;Name=YPD4_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08230;old_locus_tag=YPD4_1403
NC_017154.1	Protein Homology	CDS	1811336	1811875	.	+	0	ID=cds1611;Parent=gene1638;Dbxref=Genbank:WP_002211926.1;Name=WP_002211926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211926.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1812220	1812326	.	+	.	ID=id138;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1812221	1812296	.	-	.	ID=gene1639;Name=YPD4_RS08235;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS08235;old_locus_tag=YPD4_t20
NC_017154.1	tRNAscan-SE	tRNA	1812221	1812296	.	-	.	ID=rna25;Parent=gene1639;anticodon=(pos:complement(1812261..1812263));gbkey=tRNA;product=tRNA-Asn
NC_017154.1	tRNAscan-SE	exon	1812221	1812296	.	-	.	ID=id139;Parent=rna25;anticodon=(pos:complement(1812261..1812263));gbkey=tRNA;product=tRNA-Asn
NC_017154.1	RefSeq	gene	1812742	1813371	.	-	.	ID=gene1640;Name=YPD4_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08240;old_locus_tag=YPD4_1404
NC_017154.1	Protein Homology	CDS	1812742	1813371	.	-	0	ID=cds1612;Parent=gene1640;Dbxref=Genbank:WP_002213125.1;Name=WP_002213125.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213125.1;transl_table=11
NC_017154.1	RefSeq	gene	1813629	1814921	.	-	.	ID=gene1641;Name=YPD4_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08245;old_locus_tag=YPD4_1405
NC_017154.1	Protein Homology	CDS	1813629	1814921	.	-	0	ID=cds1613;Parent=gene1641;Dbxref=Genbank:WP_002213124.1;Name=WP_002213124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213124.1;transl_table=11
NC_017154.1	RefSeq	gene	1814941	1815447	.	-	.	ID=gene1642;Name=YPD4_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08250;old_locus_tag=YPD4_1406
NC_017154.1	Protein Homology	CDS	1814941	1815447	.	-	0	ID=cds1614;Parent=gene1642;Dbxref=Genbank:WP_002213122.1;Name=WP_002213122.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213122.1;transl_table=11
NC_017154.1	RefSeq	gene	1815571	1816563	.	-	.	ID=gene1643;Name=YPD4_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08255;old_locus_tag=YPD4_1407
NC_017154.1	Protein Homology	CDS	1815571	1816563	.	-	0	ID=cds1615;Parent=gene1643;Dbxref=Genbank:WP_002213121.1;Name=WP_002213121.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213121.1;transl_table=11
NC_017154.1	RefSeq	gene	1817086	1817826	.	+	.	ID=gene1644;Name=YPD4_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08260;old_locus_tag=YPD4_1408
NC_017154.1	Protein Homology	CDS	1817086	1817826	.	+	0	ID=cds1616;Parent=gene1644;Dbxref=Genbank:WP_002213120.1;Name=WP_002213120.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_002213120.1;transl_table=11
NC_017154.1	RefSeq	gene	1818032	1818196	.	-	.	ID=gene1645;Name=YPD4_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08265
NC_017154.1	Protein Homology	CDS	1818032	1818196	.	-	0	ID=cds1617;Parent=gene1645;Dbxref=Genbank:WP_002216586.1;Name=WP_002216586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216586.1;transl_table=11
NC_017154.1	RefSeq	gene	1818213	1820339	.	-	.	ID=gene1646;Name=YPD4_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08270;old_locus_tag=YPD4_1409
NC_017154.1	Protein Homology	CDS	1818213	1820339	.	-	0	ID=cds1618;Parent=gene1646;Dbxref=Genbank:WP_002213113.1;Name=WP_002213113.1;gbkey=CDS;product=alpha-galactosidase;protein_id=WP_002213113.1;transl_table=11
NC_017154.1	RefSeq	gene	1820417	1821694	.	-	.	ID=gene1647;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=YPD4_RS08275;old_locus_tag=YPD4_1410
NC_017154.1	Protein Homology	CDS	1820417	1821694	.	-	0	ID=cds1619;Parent=gene1647;Dbxref=Genbank:WP_042468818.1;Name=WP_042468818.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=WP_042468818.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1821641	1822964	.	+	.	ID=id140;gbkey=repeat_region;gene=lacY
NC_017154.1	RefSeq	gene	1821719	1822927	.	+	.	ID=gene1648;Name=YPD4_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08280;old_locus_tag=YPD4_1411
NC_017154.1	Protein Homology	CDS	1821719	1822927	.	+	0	ID=cds1620;Parent=gene1648;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	1823178	1823843	.	-	.	ID=gene1649;Name=YPD4_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08285;old_locus_tag=YPD4_1412
NC_017154.1	Protein Homology	CDS	1823178	1823843	.	-	0	ID=cds1621;Parent=gene1649;Dbxref=Genbank:WP_002220277.1;Name=WP_002220277.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=WP_002220277.1;transl_table=11
NC_017154.1	RefSeq	gene	1824254	1824808	.	+	.	ID=gene1650;Name=YPD4_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08290;old_locus_tag=YPD4_1413
NC_017154.1	Protein Homology	CDS	1824254	1824808	.	+	0	ID=cds1622;Parent=gene1650;Dbxref=Genbank:WP_002211847.1;Name=WP_002211847.1;gbkey=CDS;product=yfeABCD regulator yfeE;protein_id=WP_002211847.1;transl_table=11
NC_017154.1	RefSeq	gene	1824937	1825812	.	-	.	ID=gene1651;Name=YPD4_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08295;old_locus_tag=YPD4_1414
NC_017154.1	Protein Homology	CDS	1824937	1825812	.	-	0	ID=cds1623;Parent=gene1651;Dbxref=Genbank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211846.1;transl_table=11
NC_017154.1	RefSeq	gene	1825837	1826049	.	-	.	ID=gene1652;Name=YPD4_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08300
NC_017154.1	Protein Homology	CDS	1825837	1826049	.	-	0	ID=cds1624;Parent=gene1652;Dbxref=Genbank:WP_002216683.1;Name=WP_002216683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216683.1;transl_table=11
NC_017154.1	RefSeq	gene	1826117	1827010	.	-	.	ID=gene1653;Name=YPD4_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08305;old_locus_tag=YPD4_1415
NC_017154.1	Protein Homology	CDS	1826117	1827010	.	-	0	ID=cds1625;Parent=gene1653;Dbxref=Genbank:WP_002211845.1;Name=WP_002211845.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeD;protein_id=WP_002211845.1;transl_table=11
NC_017154.1	RefSeq	gene	1827007	1827891	.	-	.	ID=gene1654;Name=YPD4_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08310;old_locus_tag=YPD4_1416
NC_017154.1	Protein Homology	CDS	1827007	1827891	.	-	0	ID=cds1626;Parent=gene1654;Dbxref=Genbank:WP_002211844.1;Name=WP_002211844.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeC;protein_id=WP_002211844.1;transl_table=11
NC_017154.1	RefSeq	gene	1827891	1828781	.	-	.	ID=gene1655;Name=YPD4_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08315;old_locus_tag=YPD4_1417
NC_017154.1	Protein Homology	CDS	1827891	1828781	.	-	0	ID=cds1627;Parent=gene1655;Dbxref=Genbank:WP_002211843.1;Name=WP_002211843.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeB;protein_id=WP_002211843.1;transl_table=11
NC_017154.1	RefSeq	gene	1828778	1829746	.	-	.	ID=gene1656;Name=YPD4_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08320;old_locus_tag=YPD4_1418
NC_017154.1	Protein Homology	CDS	1828778	1829746	.	-	0	ID=cds1628;Parent=gene1656;Dbxref=Genbank:WP_002211842.1;Name=WP_002211842.1;gbkey=CDS;product=iron-binding protein;protein_id=WP_002211842.1;transl_table=11
NC_017154.1	RefSeq	gene	1829958	1830620	.	+	.	ID=gene1657;Name=YPD4_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08325;old_locus_tag=YPD4_1419
NC_017154.1	Protein Homology	CDS	1829958	1830620	.	+	0	ID=cds1629;Parent=gene1657;Dbxref=Genbank:WP_002216686.1;Name=WP_002216686.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_002216686.1;transl_table=11
NC_017154.1	RefSeq	gene	1830742	1831425	.	-	.	ID=gene1658;Name=YPD4_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08330;old_locus_tag=YPD4_1420
NC_017154.1	Protein Homology	CDS	1830742	1831425	.	-	0	ID=cds1630;Parent=gene1658;Dbxref=Genbank:WP_002211840.1;Name=WP_002211840.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211840.1;transl_table=11
NC_017154.1	RefSeq	gene	1831744	1831995	.	+	.	ID=gene1659;Name=YPD4_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08335
NC_017154.1	Protein Homology	CDS	1831744	1831995	.	+	0	ID=cds1631;Parent=gene1659;Dbxref=Genbank:WP_002211839.1;Name=WP_002211839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211839.1;transl_table=11
NC_017154.1	RefSeq	gene	1832067	1832444	.	-	.	ID=gene1660;Name=YPD4_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08340
NC_017154.1	Protein Homology	CDS	1832067	1832444	.	-	0	ID=cds1632;Parent=gene1660;Dbxref=Genbank:WP_002216692.1;Name=WP_002216692.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216692.1;transl_table=11
NC_017154.1	RefSeq	gene	1832754	1832966	.	-	.	ID=gene1661;Name=YPD4_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08345
NC_017154.1	Protein Homology	CDS	1832754	1832966	.	-	0	ID=cds1633;Parent=gene1661;Dbxref=Genbank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216696.1;transl_table=11
NC_017154.1	RefSeq	gene	1833357	1835285	.	+	.	ID=gene1662;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=YPD4_RS08350;old_locus_tag=YPD4_1421
NC_017154.1	Protein Homology	CDS	1833357	1835285	.	+	0	ID=cds1634;Parent=gene1662;Dbxref=Genbank:WP_002211836.1;Name=WP_002211836.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11
NC_017154.1	RefSeq	gene	1835490	1835840	.	+	.	ID=gene1663;Name=YPD4_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08355;old_locus_tag=YPD4_1422
NC_017154.1	Protein Homology	CDS	1835490	1835840	.	+	0	ID=cds1635;Parent=gene1663;Dbxref=Genbank:WP_002211835.1;Name=WP_002211835.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_002211835.1;transl_table=11
NC_017154.1	RefSeq	gene	1835937	1836134	.	+	.	ID=gene1664;Name=YPD4_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08360
NC_017154.1	Protein Homology	CDS	1835937	1836134	.	+	0	ID=cds1636;Parent=gene1664;Dbxref=Genbank:WP_002211834.1;Name=WP_002211834.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11
NC_017154.1	RefSeq	gene	1836172	1836528	.	+	.	ID=gene1665;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=YPD4_RS08365;old_locus_tag=YPD4_1423
NC_017154.1	Protein Homology	CDS	1836172	1836528	.	+	0	ID=cds1637;Parent=gene1665;Dbxref=Genbank:WP_002211833.1;Name=WP_002211833.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11
NC_017154.1	RefSeq	gene	1837027	1838010	.	+	.	ID=gene1666;Name=YPD4_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08370;old_locus_tag=YPD4_1424
NC_017154.1	Protein Homology	CDS	1837027	1838010	.	+	0	ID=cds1638;Parent=gene1666;Dbxref=Genbank:WP_002211832.1;Name=WP_002211832.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_002211832.1;transl_table=11
NC_017154.1	RefSeq	gene	1838024	1840411	.	+	.	ID=gene1667;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=YPD4_RS08375;old_locus_tag=YPD4_1425
NC_017154.1	Protein Homology	CDS	1838024	1840411	.	+	0	ID=cds1639;Parent=gene1667;Dbxref=Genbank:WP_002211831.1;Name=WP_002211831.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_002211831.1;transl_table=11
NC_017154.1	RefSeq	gene	1840416	1840712	.	+	.	ID=gene1668;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=YPD4_RS08380
NC_017154.1	Protein Homology	CDS	1840416	1840712	.	+	0	ID=cds1640;Parent=gene1668;Dbxref=Genbank:WP_002211830.1;Name=WP_002211830.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11
NC_017154.1	RefSeq	gene	1841046	1841504	.	+	.	ID=gene1669;Name=YPD4_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08385;old_locus_tag=YPD4_1426
NC_017154.1	Protein Homology	CDS	1841046	1841504	.	+	0	ID=cds1641;Parent=gene1669;Dbxref=Genbank:WP_002211829.1;Name=WP_002211829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211829.1;transl_table=11
NC_017154.1	RefSeq	gene	1841731	1842738	.	+	.	ID=gene1670;Name=YPD4_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08390;old_locus_tag=YPD4_1427
NC_017154.1	Protein Homology	CDS	1841731	1842738	.	+	0	ID=cds1642;Parent=gene1670;Dbxref=Genbank:WP_002220283.1;Name=WP_002220283.1;gbkey=CDS;product=vitamin B12 import system permease BtuC;protein_id=WP_002220283.1;transl_table=11
NC_017154.1	RefSeq	gene	1842808	1843362	.	+	.	ID=gene1671;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=YPD4_RS08395;old_locus_tag=YPD4_1428
NC_017154.1	Protein Homology	CDS	1842808	1843362	.	+	0	ID=cds1643;Parent=gene1671;Dbxref=Genbank:WP_002211827.1;Name=WP_002211827.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11
NC_017154.1	RefSeq	gene	1843387	1844145	.	+	.	ID=gene1672;Name=YPD4_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08400;old_locus_tag=YPD4_1429
NC_017154.1	Protein Homology	CDS	1843387	1844145	.	+	0	ID=cds1644;Parent=gene1672;Dbxref=Genbank:WP_002211826.1;Name=WP_002211826.1;gbkey=CDS;product=vitamin B12 ABC transporter ATP-binding protein;protein_id=WP_002211826.1;transl_table=11
NC_017154.1	RefSeq	gene	1844495	1845650	.	+	.	ID=gene1673;Name=YPD4_RS08405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS08405;old_locus_tag=YPD4_1430;pseudo=true
NC_017154.1	Protein Homology	CDS	1844495	1845650	.	+	0	ID=cds1645;Parent=gene1673;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1845637	1846620	.	+	.	ID=gene1674;Name=YPD4_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08410;old_locus_tag=YPD4_1431
NC_017154.1	Protein Homology	CDS	1845637	1846620	.	+	0	ID=cds1646;Parent=gene1674;Dbxref=Genbank:WP_002211824.1;Name=WP_002211824.1;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;gbkey=CDS;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_002211824.1;transl_table=11
NC_017154.1	RefSeq	gene	1846617	1848620	.	+	.	ID=gene1675;Name=YPD4_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08415;old_locus_tag=YPD4_1432
NC_017154.1	Protein Homology	CDS	1846617	1848620	.	+	0	ID=cds1647;Parent=gene1675;Dbxref=Genbank:WP_002211823.1;Name=WP_002211823.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional polymyxin resistance protein ArnA;protein_id=WP_002211823.1;transl_table=11
NC_017154.1	RefSeq	gene	1848617	1849522	.	+	.	ID=gene1676;Name=YPD4_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08420;old_locus_tag=YPD4_1433
NC_017154.1	Protein Homology	CDS	1848617	1849522	.	+	0	ID=cds1648;Parent=gene1676;Dbxref=Genbank:WP_002211822.1;Name=WP_002211822.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=WP_002211822.1;transl_table=11
NC_017154.1	RefSeq	gene	1849519	1851183	.	+	.	ID=gene1677;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=YPD4_RS08425;old_locus_tag=YPD4_1434
NC_017154.1	Protein Homology	CDS	1849519	1851183	.	+	0	ID=cds1649;Parent=gene1677;Dbxref=Genbank:WP_002211821.1;Name=WP_002211821.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase;protein_id=WP_002211821.1;transl_table=11
NC_017154.1	RefSeq	gene	1851180	1851524	.	+	.	ID=gene1678;Name=YPD4_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08430;old_locus_tag=YPD4_1435
NC_017154.1	Protein Homology	CDS	1851180	1851524	.	+	0	ID=cds1650;Parent=gene1678;Dbxref=Genbank:WP_002211820.1;Name=WP_002211820.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_002211820.1;transl_table=11
NC_017154.1	RefSeq	gene	1851521	1851907	.	+	.	ID=gene1679;Name=YPD4_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08435;old_locus_tag=YPD4_1436
NC_017154.1	Protein Homology	CDS	1851521	1851907	.	+	0	ID=cds1651;Parent=gene1679;Dbxref=Genbank:WP_002211819.1;Name=WP_002211819.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002211819.1;transl_table=11
NC_017154.1	RefSeq	gene	1852187	1852651	.	+	.	ID=gene1680;Name=YPD4_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08440;old_locus_tag=YPD4_1437
NC_017154.1	Protein Homology	CDS	1852187	1852651	.	+	0	ID=cds1652;Parent=gene1680;Dbxref=Genbank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002216102.1;transl_table=11
NC_017154.1	RefSeq	gene	1852776	1853792	.	+	.	ID=gene1681;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=YPD4_RS08445;old_locus_tag=YPD4_1438
NC_017154.1	Protein Homology	CDS	1852776	1853792	.	+	0	ID=cds1653;Parent=gene1681;Dbxref=Genbank:WP_002211816.1;Name=WP_002211816.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=WP_002211816.1;transl_table=11
NC_017154.1	RefSeq	gene	1853844	1855307	.	+	.	ID=gene1682;Name=YPD4_RS08450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS08450;pseudo=true
NC_017154.1	Protein Homology	CDS	1853844	1855307	.	+	0	ID=cds1654;Parent=gene1682;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1854564..1854566%2Caa:Other);transl_table=11
NC_017154.1	RefSeq	gene	1855476	1856522	.	-	.	ID=gene1683;Name=YPD4_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08455;old_locus_tag=YPD4_1441
NC_017154.1	Protein Homology	CDS	1855476	1856522	.	-	0	ID=cds1655;Parent=gene1683;Dbxref=Genbank:WP_002211815.1;Name=WP_002211815.1;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002211815.1;transl_table=11
NC_017154.1	RefSeq	gene	1856679	1857500	.	-	.	ID=gene1684;Name=YPD4_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08460;old_locus_tag=YPD4_1442
NC_017154.1	Protein Homology	CDS	1856679	1857500	.	-	0	ID=cds1656;Parent=gene1684;Dbxref=Genbank:WP_002211814.1;Name=WP_002211814.1;gbkey=CDS;product=PEP synthetase regulatory protein;protein_id=WP_002211814.1;transl_table=11
NC_017154.1	RefSeq	gene	1857837	1860221	.	+	.	ID=gene1685;Name=YPD4_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08465;old_locus_tag=YPD4_1443
NC_017154.1	Protein Homology	CDS	1857837	1860221	.	+	0	ID=cds1657;Parent=gene1685;Dbxref=Genbank:WP_002211813.1;Name=WP_002211813.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11
NC_017154.1	RefSeq	gene	1860820	1861923	.	-	.	ID=gene1686;Name=YPD4_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08470;old_locus_tag=YPD4_1444
NC_017154.1	Protein Homology	CDS	1860820	1861923	.	-	0	ID=cds1658;Parent=gene1686;Dbxref=Genbank:WP_002211812.1;Name=WP_002211812.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211812.1;transl_table=11
NC_017154.1	RefSeq	gene	1862544	1865600	.	+	.	ID=gene1687;Name=YPD4_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08475;old_locus_tag=YPD4_1445
NC_017154.1	Protein Homology	CDS	1862544	1865600	.	+	0	ID=cds1659;Parent=gene1687;Dbxref=Genbank:WP_002211811.1;Name=WP_002211811.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211811.1;transl_table=11
NC_017154.1	RefSeq	gene	1865722	1866138	.	+	.	ID=gene1688;Name=YPD4_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08480;old_locus_tag=YPD4_1446
NC_017154.1	Protein Homology	CDS	1865722	1866138	.	+	0	ID=cds1660;Parent=gene1688;Dbxref=Genbank:WP_002211810.1;Name=WP_002211810.1;Note=required for efficient enterobactin production;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002211810.1;transl_table=11
NC_017154.1	RefSeq	gene	1866397	1866555	.	+	.	ID=gene1689;Name=YPD4_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08485
NC_017154.1	Protein Homology	CDS	1866397	1866555	.	+	0	ID=cds1661;Parent=gene1689;Dbxref=Genbank:WP_002218287.1;Name=WP_002218287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218287.1;transl_table=11
NC_017154.1	RefSeq	gene	1866733	1867104	.	+	.	ID=gene1690;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=YPD4_RS08490;old_locus_tag=YPD4_1447
NC_017154.1	Protein Homology	CDS	1866733	1867104	.	+	0	ID=cds1662;Parent=gene1690;Dbxref=Genbank:WP_002211809.1;Name=WP_002211809.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=(Fe-S)-cluster assembly protein;protein_id=WP_002211809.1;transl_table=11
NC_017154.1	RefSeq	gene	1867119	1868630	.	+	.	ID=gene1691;Name=YPD4_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08495;old_locus_tag=YPD4_1448
NC_017154.1	Protein Homology	CDS	1867119	1868630	.	+	0	ID=cds1663;Parent=gene1691;Dbxref=Genbank:WP_002211808.1;Name=WP_002211808.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=Fe-S cluster assembly protein SufB;protein_id=WP_002211808.1;transl_table=11
NC_017154.1	RefSeq	gene	1868816	1869562	.	+	.	ID=gene1692;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=YPD4_RS08500;old_locus_tag=YPD4_1449
NC_017154.1	Protein Homology	CDS	1868816	1869562	.	+	0	ID=cds1664;Parent=gene1692;Dbxref=Genbank:WP_002211807.1;Name=WP_002211807.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_002211807.1;transl_table=11
NC_017154.1	RefSeq	gene	1869537	1870862	.	+	.	ID=gene1693;Name=YPD4_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08505;old_locus_tag=YPD4_1450
NC_017154.1	Protein Homology	CDS	1869537	1870862	.	+	0	ID=cds1665;Parent=gene1693;Dbxref=Genbank:WP_002211806.1;Name=WP_002211806.1;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_002211806.1;transl_table=11
NC_017154.1	RefSeq	gene	1870859	1872079	.	+	.	ID=gene1694;Name=YPD4_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08510;old_locus_tag=YPD4_1451
NC_017154.1	Protein Homology	CDS	1870859	1872079	.	+	0	ID=cds1666;Parent=gene1694;Dbxref=Genbank:WP_002211805.1;Name=WP_002211805.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002211805.1;transl_table=11
NC_017154.1	RefSeq	gene	1872168	1872590	.	+	.	ID=gene1695;Name=YPD4_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08515;old_locus_tag=YPD4_1452
NC_017154.1	Protein Homology	CDS	1872168	1872590	.	+	0	ID=cds1667;Parent=gene1695;Dbxref=Genbank:WP_002211804.1;Name=WP_002211804.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desulfuration protein SufE;protein_id=WP_002211804.1;transl_table=11
NC_017154.1	RefSeq	gene	1872861	1873880	.	+	.	ID=gene1696;Name=YPD4_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08520;old_locus_tag=YPD4_1453
NC_017154.1	Protein Homology	CDS	1872861	1873880	.	+	0	ID=cds1668;Parent=gene1696;Dbxref=Genbank:WP_002211803.1;Name=WP_002211803.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002211803.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1873854	1875818	.	+	.	ID=id141;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1873924	1874703	.	-	.	ID=gene1697;Name=YPD4_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08525;old_locus_tag=YPD4_1454
NC_017154.1	Protein Homology	CDS	1873924	1874703	.	-	0	ID=cds1669;Parent=gene1697;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	1874703	1875725	.	-	.	ID=gene1698;Name=YPD4_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08530;old_locus_tag=YPD4_1455
NC_017154.1	Protein Homology	CDS	1874703	1875725	.	-	0	ID=cds1670;Parent=gene1698;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1876195	1876917	.	+	.	ID=id142;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1876307	1876765	.	-	.	ID=gene1699;Name=YPD4_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08535;old_locus_tag=YPD4_1456
NC_017154.1	Protein Homology	CDS	1876307	1876765	.	-	0	ID=cds1671;Parent=gene1699;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	1876755	1876925	.	-	.	ID=gene1700;Name=YPD4_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08540
NC_017154.1	Protein Homology	CDS	1876755	1876925	.	-	0	ID=cds1672;Parent=gene1700;Dbxref=Genbank:WP_002430115.1;Name=WP_002430115.1;gbkey=CDS;product=invasin;protein_id=WP_002430115.1;transl_table=11
NC_017154.1	RefSeq	gene	1876956	1877192	.	-	.	ID=gene1701;Name=YPD4_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08545
NC_017154.1	Protein Homology	CDS	1876956	1877192	.	-	0	ID=cds1673;Parent=gene1701;Dbxref=Genbank:WP_002227902.1;Name=WP_002227902.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227902.1;transl_table=11
NC_017154.1	RefSeq	gene	1877513	1878925	.	-	.	ID=gene1702;Name=YPD4_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08550;old_locus_tag=YPD4_1457
NC_017154.1	Protein Homology	CDS	1877513	1878925	.	-	0	ID=cds1674;Parent=gene1702;Dbxref=Genbank:WP_002210936.1;Name=WP_002210936.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002210936.1;transl_table=11
NC_017154.1	RefSeq	gene	1879501	1879577	.	-	.	ID=gene1703;Name=YPD4_RS08555;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS08555;old_locus_tag=YPD4_t21
NC_017154.1	tRNAscan-SE	tRNA	1879501	1879577	.	-	.	ID=rna26;Parent=gene1703;anticodon=(pos:complement(1879541..1879543));gbkey=tRNA;product=tRNA-Val
NC_017154.1	tRNAscan-SE	exon	1879501	1879577	.	-	.	ID=id143;Parent=rna26;anticodon=(pos:complement(1879541..1879543));gbkey=tRNA;product=tRNA-Val
NC_017154.1	RefSeq	gene	1879637	1879713	.	-	.	ID=gene1704;Name=YPD4_RS08560;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS08560;old_locus_tag=YPD4_t22
NC_017154.1	tRNAscan-SE	tRNA	1879637	1879713	.	-	.	ID=rna27;Parent=gene1704;anticodon=(pos:complement(1879677..1879679));gbkey=tRNA;product=tRNA-Val
NC_017154.1	tRNAscan-SE	exon	1879637	1879713	.	-	.	ID=id144;Parent=rna27;anticodon=(pos:complement(1879677..1879679));gbkey=tRNA;product=tRNA-Val
NC_017154.1	RefSeq	gene	1879956	1881328	.	-	.	ID=gene1705;Name=YPD4_RS08565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS08565;pseudo=true
NC_017154.1	Protein Homology	CDS	1879956	1881328	.	-	0	ID=cds1675;Parent=gene1705;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1881577	1882233	.	+	.	ID=gene1706;Name=YPD4_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08570;old_locus_tag=YPD4_1460
NC_017154.1	Protein Homology	CDS	1881577	1882233	.	+	0	ID=cds1676;Parent=gene1706;Dbxref=Genbank:WP_002210939.1;Name=WP_002210939.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_002210939.1;transl_table=11
NC_017154.1	RefSeq	gene	1882284	1883435	.	-	.	ID=gene1707;Name=YPD4_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08575;old_locus_tag=YPD4_1461
NC_017154.1	Protein Homology	CDS	1882284	1883435	.	-	0	ID=cds1677;Parent=gene1707;Dbxref=Genbank:WP_002210940.1;Name=WP_002210940.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;gbkey=CDS;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002210940.1;transl_table=11
NC_017154.1	RefSeq	gene	1883915	1885117	.	-	.	ID=gene1708;Name=YPD4_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08580;old_locus_tag=YPD4_1462
NC_017154.1	Protein Homology	CDS	1883915	1885117	.	-	0	ID=cds1678;Parent=gene1708;Dbxref=Genbank:WP_002210941.1;Name=WP_002210941.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002210941.1;transl_table=11
NC_017154.1	RefSeq	gene	1885407	1886339	.	+	.	ID=gene1709;Name=YPD4_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08585;old_locus_tag=YPD4_1463
NC_017154.1	Protein Homology	CDS	1885407	1886339	.	+	0	ID=cds1679;Parent=gene1709;Dbxref=Genbank:WP_002210942.1;Name=WP_002210942.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210942.1;transl_table=11
NC_017154.1	RefSeq	gene	1886428	1887453	.	-	.	ID=gene1710;Name=YPD4_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08590;old_locus_tag=YPD4_1464
NC_017154.1	Protein Homology	CDS	1886428	1887453	.	-	0	ID=cds1680;Parent=gene1710;Dbxref=Genbank:WP_002210943.1;Name=WP_002210943.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=PurR family transcriptional regulator;protein_id=WP_002210943.1;transl_table=11
NC_017154.1	RefSeq	gene	1887980	1888558	.	-	.	ID=gene1711;Name=YPD4_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08595;old_locus_tag=YPD4_1465
NC_017154.1	Protein Homology	CDS	1887980	1888558	.	-	0	ID=cds1681;Parent=gene1711;Dbxref=Genbank:WP_002210944.1;Name=WP_002210944.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002210944.1;transl_table=11
NC_017154.1	RefSeq	gene	1888919	1889770	.	-	.	ID=gene1712;Name=YPD4_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08600;old_locus_tag=YPD4_1466
NC_017154.1	Protein Homology	CDS	1888919	1889770	.	-	0	ID=cds1682;Parent=gene1712;Dbxref=Genbank:WP_002210945.1;Name=WP_002210945.1;gbkey=CDS;product=hydrolase;protein_id=WP_002210945.1;transl_table=11
NC_017154.1	RefSeq	gene	1889889	1890110	.	+	.	ID=gene1713;Name=YPD4_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08605
NC_017154.1	Protein Homology	CDS	1889889	1890110	.	+	0	ID=cds1683;Parent=gene1713;Dbxref=Genbank:WP_002216283.1;Name=WP_002216283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216283.1;transl_table=11
NC_017154.1	RefSeq	gene	1890210	1890560	.	+	.	ID=gene1714;Name=YPD4_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08610;old_locus_tag=YPD4_1467
NC_017154.1	Protein Homology	CDS	1890210	1890560	.	+	0	ID=cds1684;Parent=gene1714;Dbxref=Genbank:WP_002210946.1;Name=WP_002210946.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002210946.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1890658	1890832	.	+	.	ID=id145;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1890869	1891549	.	-	.	ID=gene1715;Name=YPD4_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08615;old_locus_tag=YPD4_1468
NC_017154.1	Protein Homology	CDS	1890869	1891549	.	-	0	ID=cds1685;Parent=gene1715;Dbxref=Genbank:WP_002210947.1;Name=WP_002210947.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_002210947.1;transl_table=11
NC_017154.1	RefSeq	gene	1891628	1892035	.	-	.	ID=gene1716;Name=YPD4_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08620;old_locus_tag=YPD4_1469
NC_017154.1	Protein Homology	CDS	1891628	1892035	.	-	0	ID=cds1686;Parent=gene1716;Dbxref=Genbank:WP_002210948.1;Name=WP_002210948.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=lactoylglutathione lyase;protein_id=WP_002210948.1;transl_table=11
NC_017154.1	RefSeq	gene	1892308	1895262	.	+	.	ID=gene1717;Name=YPD4_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08625;old_locus_tag=YPD4_1470
NC_017154.1	Protein Homology	CDS	1892308	1895262	.	+	0	ID=cds1687;Parent=gene1717;Dbxref=Genbank:WP_002210949.1;Name=WP_002210949.1;gbkey=CDS;product=toxin;protein_id=WP_002210949.1;transl_table=11
NC_017154.1	RefSeq	gene	1895483	1896580	.	-	.	ID=gene1718;Name=YPD4_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08630;old_locus_tag=YPD4_1471
NC_017154.1	Protein Homology	CDS	1895483	1896580	.	-	0	ID=cds1688;Parent=gene1718;Dbxref=Genbank:WP_002210950.1;Name=WP_002210950.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=WP_002210950.1;transl_table=11
NC_017154.1	RefSeq	gene	1896668	1897267	.	-	.	ID=gene1719;Name=YPD4_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08635;old_locus_tag=YPD4_1472
NC_017154.1	Protein Homology	CDS	1896668	1897267	.	-	0	ID=cds1689;Parent=gene1719;Dbxref=Genbank:WP_002210951.1;Name=WP_002210951.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11
NC_017154.1	RefSeq	gene	1897490	1899127	.	-	.	ID=gene1720;Name=YPD4_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08640;old_locus_tag=YPD4_1473
NC_017154.1	Protein Homology	CDS	1897490	1899127	.	-	0	ID=cds1690;Parent=gene1720;Dbxref=Genbank:WP_002210952.1;Name=WP_002210952.1;gbkey=CDS;product=metal dependent hydrolase;protein_id=WP_002210952.1;transl_table=11
NC_017154.1	RefSeq	gene	1899301	1899540	.	+	.	ID=gene1721;Name=YPD4_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08645
NC_017154.1	Protein Homology	CDS	1899301	1899540	.	+	0	ID=cds1691;Parent=gene1721;Dbxref=Genbank:WP_002210953.1;Name=WP_002210953.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210953.1;transl_table=11
NC_017154.1	RefSeq	gene	1899672	1900568	.	+	.	ID=gene1722;Name=YPD4_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08650;old_locus_tag=YPD4_1474
NC_017154.1	Protein Homology	CDS	1899672	1900568	.	+	0	ID=cds1692;Parent=gene1722;Dbxref=Genbank:WP_002210954.1;Name=WP_002210954.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210954.1;transl_table=11
NC_017154.1	RefSeq	gene	1901366	1901797	.	+	.	ID=gene1723;Name=YPD4_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08655;old_locus_tag=YPD4_1475
NC_017154.1	Protein Homology	CDS	1901366	1901797	.	+	0	ID=cds1693;Parent=gene1723;Dbxref=Genbank:WP_002210955.1;Name=WP_002210955.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=SlyA family transcriptional regulator;protein_id=WP_002210955.1;transl_table=11
NC_017154.1	RefSeq	gene	1901941	1902408	.	-	.	ID=gene1724;Name=YPD4_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08660;old_locus_tag=YPD4_1476
NC_017154.1	Protein Homology	CDS	1901941	1902408	.	-	0	ID=cds1694;Parent=gene1724;Dbxref=Genbank:WP_002210956.1;Name=WP_002210956.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210956.1;transl_table=11
NC_017154.1	RefSeq	gene	1902963	1904075	.	+	.	ID=gene1725;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=YPD4_RS08665;old_locus_tag=YPD4_1477
NC_017154.1	Protein Homology	CDS	1902963	1904075	.	+	0	ID=cds1695;Parent=gene1725;Dbxref=Genbank:WP_002218322.1;Name=WP_002218322.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_002218322.1;transl_table=11
NC_017154.1	RefSeq	gene	1904133	1904447	.	+	.	ID=gene1726;Name=YPD4_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08670;old_locus_tag=YPD4_1478
NC_017154.1	Protein Homology	CDS	1904133	1904447	.	+	0	ID=cds1696;Parent=gene1726;Dbxref=Genbank:WP_002218323.1;Name=WP_002218323.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002218323.1;transl_table=11
NC_017154.1	RefSeq	gene	1904538	1905191	.	+	.	ID=gene1727;Name=YPD4_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08675;old_locus_tag=YPD4_1479
NC_017154.1	Protein Homology	CDS	1904538	1905191	.	+	0	ID=cds1697;Parent=gene1727;Dbxref=Genbank:WP_002210959.1;Name=WP_002210959.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_002210959.1;transl_table=11
NC_017154.1	RefSeq	gene	1905373	1906647	.	+	.	ID=gene1728;Name=YPD4_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08680;old_locus_tag=YPD4_1480
NC_017154.1	Protein Homology	CDS	1905373	1906647	.	+	0	ID=cds1698;Parent=gene1728;Dbxref=Genbank:WP_002210960.1;Name=WP_002210960.1;gbkey=CDS;product=tyrosine--tRNA ligase;protein_id=WP_002210960.1;transl_table=11
NC_017154.1	RefSeq	gene	1906802	1907662	.	+	.	ID=gene1729;Name=YPD4_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08685;old_locus_tag=YPD4_1481
NC_017154.1	Protein Homology	CDS	1906802	1907662	.	+	0	ID=cds1699;Parent=gene1729;Dbxref=Genbank:WP_002210961.1;Name=WP_002210961.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_002210961.1;transl_table=11
NC_017154.1	RefSeq	gene	1907722	1908327	.	-	.	ID=gene1730;Name=YPD4_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08690;old_locus_tag=YPD4_1482
NC_017154.1	Protein Homology	CDS	1907722	1908327	.	-	0	ID=cds1700;Parent=gene1730;Dbxref=Genbank:WP_002210962.1;Name=WP_002210962.1;gbkey=CDS;product=glutathionine S-transferase;protein_id=WP_002210962.1;transl_table=11
NC_017154.1	RefSeq	gene	1908572	1908835	.	-	.	ID=gene1731;Name=YPD4_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08695
NC_017154.1	Protein Homology	CDS	1908572	1908835	.	-	0	ID=cds1701;Parent=gene1731;Dbxref=Genbank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210964.1;transl_table=11
NC_017154.1	RefSeq	gene	1909081	1909671	.	-	.	ID=gene1732;Name=YPD4_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08700;old_locus_tag=YPD4_1483
NC_017154.1	Protein Homology	CDS	1909081	1909671	.	-	0	ID=cds1702;Parent=gene1732;Dbxref=Genbank:WP_002210965.1;Name=WP_002210965.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210965.1;transl_table=11
NC_017154.1	RefSeq	gene	1909926	1911431	.	-	.	ID=gene1733;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=YPD4_RS08705;old_locus_tag=YPD4_1484
NC_017154.1	Protein Homology	CDS	1909926	1911431	.	-	0	ID=cds1703;Parent=gene1733;Dbxref=Genbank:WP_002215910.1;Name=WP_002215910.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease A;protein_id=WP_002215910.1;transl_table=11
NC_017154.1	RefSeq	gene	1912074	1913354	.	-	.	ID=gene1734;Name=YPD4_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08710;old_locus_tag=YPD4_1485
NC_017154.1	Protein Homology	CDS	1912074	1913354	.	-	0	ID=cds1704;Parent=gene1734;Dbxref=Genbank:WP_002210967.1;Name=WP_002210967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210967.1;transl_table=11
NC_017154.1	RefSeq	gene	1913744	1914559	.	-	.	ID=gene1735;Name=YPD4_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08715;old_locus_tag=YPD4_1486
NC_017154.1	Protein Homology	CDS	1913744	1914559	.	-	0	ID=cds1705;Parent=gene1735;Dbxref=Genbank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210969.1;transl_table=11
NC_017154.1	RefSeq	gene	1914559	1915551	.	-	.	ID=gene1736;Name=YPD4_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08720;old_locus_tag=YPD4_1487
NC_017154.1	Protein Homology	CDS	1914559	1915551	.	-	0	ID=cds1706;Parent=gene1736;Dbxref=Genbank:WP_002210970.1;Name=WP_002210970.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210970.1;transl_table=11
NC_017154.1	RefSeq	gene	1915551	1916441	.	-	.	ID=gene1737;Name=YPD4_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08725;old_locus_tag=YPD4_1488
NC_017154.1	Protein Homology	CDS	1915551	1916441	.	-	0	ID=cds1707;Parent=gene1737;Dbxref=Genbank:WP_002210971.1;Name=WP_002210971.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210971.1;transl_table=11
NC_017154.1	RefSeq	gene	1916428	1917393	.	-	.	ID=gene1738;Name=YPD4_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08730;old_locus_tag=YPD4_1489
NC_017154.1	Protein Homology	CDS	1916428	1917393	.	-	0	ID=cds1708;Parent=gene1738;Dbxref=Genbank:WP_002210972.1;Name=WP_002210972.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210972.1;transl_table=11
NC_017154.1	RefSeq	gene	1917390	1919036	.	-	.	ID=gene1739;Name=YPD4_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08735;old_locus_tag=YPD4_1490
NC_017154.1	Protein Homology	CDS	1917390	1919036	.	-	0	ID=cds1709;Parent=gene1739;Dbxref=Genbank:WP_002210973.1;Name=WP_002210973.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210973.1;transl_table=11
NC_017154.1	RefSeq	gene	1919172	1919350	.	-	.	ID=gene1740;Name=YPD4_RS08740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS08740;pseudo=true
NC_017154.1	Protein Homology	CDS	1919172	1919350	.	-	0	ID=cds1710;Parent=gene1740;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1919537	1919704	.	+	.	ID=gene1741;Name=YPD4_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08745
NC_017154.1	Protein Homology	CDS	1919537	1919704	.	+	0	ID=cds1711;Parent=gene1741;Dbxref=Genbank:WP_002430114.1;Name=WP_002430114.1;gbkey=CDS;product=invasin;protein_id=WP_002430114.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1919540	1920263	.	+	.	ID=id146;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1919694	1920152	.	+	.	ID=gene1742;Name=YPD4_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08750;old_locus_tag=YPD4_1491
NC_017154.1	Protein Homology	CDS	1919694	1920152	.	+	0	ID=cds1712;Parent=gene1742;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	1920317	1921345	.	-	.	ID=gene1743;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=YPD4_RS08755;old_locus_tag=YPD4_1492
NC_017154.1	Protein Homology	CDS	1920317	1921345	.	-	0	ID=cds1713;Parent=gene1743;Dbxref=Genbank:WP_002210974.1;Name=WP_002210974.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;product=transcriptional regulator;protein_id=WP_002210974.1;transl_table=11
NC_017154.1	RefSeq	gene	1921590	1922255	.	+	.	ID=gene1744;Name=YPD4_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08760;old_locus_tag=YPD4_1493
NC_017154.1	Protein Homology	CDS	1921590	1922255	.	+	0	ID=cds1714;Parent=gene1744;Dbxref=Genbank:WP_002210975.1;Name=WP_002210975.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;product=phage-shock protein;protein_id=WP_002210975.1;transl_table=11
NC_017154.1	RefSeq	gene	1922417	1922644	.	+	.	ID=gene1745;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=YPD4_RS08765
NC_017154.1	Protein Homology	CDS	1922417	1922644	.	+	0	ID=cds1715;Parent=gene1745;Dbxref=Genbank:WP_002210976.1;Name=WP_002210976.1;Note=DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=WP_002210976.1;transl_table=11
NC_017154.1	RefSeq	gene	1922644	1923003	.	+	.	ID=gene1746;Name=YPD4_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08770;old_locus_tag=YPD4_1494
NC_017154.1	Protein Homology	CDS	1922644	1923003	.	+	0	ID=cds1716;Parent=gene1746;Dbxref=Genbank:WP_002210977.1;Name=WP_002210977.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210977.1;transl_table=11
NC_017154.1	RefSeq	gene	1923091	1923330	.	+	.	ID=gene1747;Name=YPD4_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08775
NC_017154.1	Protein Homology	CDS	1923091	1923330	.	+	0	ID=cds1717;Parent=gene1747;Dbxref=Genbank:WP_002386267.1;Name=WP_002386267.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002386267.1;transl_table=11
NC_017154.1	RefSeq	gene	1923311	1924706	.	+	.	ID=gene1748;Name=YPD4_RS08780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS08780;pseudo=true
NC_017154.1	Protein Homology	CDS	1923311	1924706	.	+	0	ID=cds1718;Parent=gene1748;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1924703	1925764	.	+	.	ID=gene1749;Name=YPD4_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08785;old_locus_tag=YPD4_1497
NC_017154.1	Protein Homology	CDS	1924703	1925764	.	+	0	ID=cds1719;Parent=gene1749;Dbxref=Genbank:WP_002210980.1;Name=WP_002210980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210980.1;transl_table=11
NC_017154.1	RefSeq	gene	1925774	1926232	.	-	.	ID=gene1750;Name=YPD4_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08790;old_locus_tag=YPD4_1498
NC_017154.1	Protein Homology	CDS	1925774	1926232	.	-	0	ID=cds1720;Parent=gene1750;Dbxref=Genbank:WP_002210981.1;Name=WP_002210981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210981.1;transl_table=11
NC_017154.1	RefSeq	gene	1926294	1926740	.	-	.	ID=gene1751;Name=YPD4_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08795;old_locus_tag=YPD4_1499
NC_017154.1	Protein Homology	CDS	1926294	1926740	.	-	0	ID=cds1721;Parent=gene1751;Dbxref=Genbank:WP_002210982.1;Name=WP_002210982.1;gbkey=CDS;product=TIGR02293 family toxin-antitoxin system antitoxin component;protein_id=WP_002210982.1;transl_table=11
NC_017154.1	RefSeq	gene	1927075	1928652	.	+	.	ID=gene1752;Name=YPD4_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08800;old_locus_tag=YPD4_1500
NC_017154.1	Protein Homology	CDS	1927075	1928652	.	+	0	ID=cds1722;Parent=gene1752;Dbxref=Genbank:WP_002210983.1;Name=WP_002210983.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210983.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1928689	1929411	.	+	.	ID=id147;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1928799	1929257	.	-	.	ID=gene1753;Name=YPD4_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08805;old_locus_tag=YPD4_1501
NC_017154.1	Protein Homology	CDS	1928799	1929257	.	-	0	ID=cds1723;Parent=gene1753;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	1929510	1930013	.	-	.	ID=gene1754;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=YPD4_RS08810;old_locus_tag=YPD4_1502
NC_017154.1	Protein Homology	CDS	1929510	1930013	.	-	0	ID=cds1724;Parent=gene1754;Dbxref=Genbank:WP_002210984.1;Name=WP_002210984.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1930193	1932153	.	+	.	ID=id148;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1930264	1931043	.	-	.	ID=gene1755;Name=YPD4_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08815;old_locus_tag=YPD4_1503
NC_017154.1	Protein Homology	CDS	1930264	1931043	.	-	0	ID=cds1725;Parent=gene1755;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	1931043	1932065	.	-	.	ID=gene1756;Name=YPD4_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08820;old_locus_tag=YPD4_1504
NC_017154.1	Protein Homology	CDS	1931043	1932065	.	-	0	ID=cds1726;Parent=gene1756;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	1932472	1932862	.	+	.	ID=gene1757;Name=YPD4_RS08825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS08825;pseudo=true
NC_017154.1	Protein Homology	CDS	1932472	1932862	.	+	0	ID=cds1727;Parent=gene1757;exception=annotated by transcript or proteomic data;gbkey=CDS;product=RNA-binding protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1932972	1933211	.	-	.	ID=gene1758;Name=YPD4_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08830
NC_017154.1	Protein Homology	CDS	1932972	1933211	.	-	0	ID=cds1728;Parent=gene1758;Dbxref=Genbank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210859.1;transl_table=11
NC_017154.1	RefSeq	gene	1933419	1934408	.	-	.	ID=gene1759;Name=YPD4_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08835;old_locus_tag=YPD4_1505
NC_017154.1	Protein Homology	CDS	1933419	1934408	.	-	0	ID=cds1729;Parent=gene1759;Dbxref=Genbank:WP_002210858.1;Name=WP_002210858.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210858.1;transl_table=11
NC_017154.1	RefSeq	gene	1934614	1937061	.	-	.	ID=gene1760;Name=YPD4_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08840;old_locus_tag=YPD4_1506
NC_017154.1	Protein Homology	CDS	1934614	1937061	.	-	0	ID=cds1730;Parent=gene1760;Dbxref=Genbank:WP_002210857.1;Name=WP_002210857.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210857.1;transl_table=11
NC_017154.1	RefSeq	gene	1937232	1937984	.	-	.	ID=gene1761;Name=YPD4_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08845;old_locus_tag=YPD4_1507
NC_017154.1	Protein Homology	CDS	1937232	1937984	.	-	0	ID=cds1731;Parent=gene1761;Dbxref=Genbank:WP_002210856.1;Name=WP_002210856.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210856.1;transl_table=11
NC_017154.1	RefSeq	gene	1938015	1938572	.	-	.	ID=gene1762;Name=YPD4_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08850
NC_017154.1	Protein Homology	CDS	1938015	1938572	.	-	0	ID=cds1732;Parent=gene1762;Dbxref=Genbank:WP_002216611.1;Name=WP_002216611.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002216611.1;transl_table=11
NC_017154.1	RefSeq	gene	1938593	1939084	.	-	.	ID=gene1763;Name=YPD4_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08855;old_locus_tag=YPD4_1508
NC_017154.1	Protein Homology	CDS	1938593	1939084	.	-	0	ID=cds1733;Parent=gene1763;Dbxref=Genbank:WP_002210853.1;Name=WP_002210853.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210853.1;transl_table=11
NC_017154.1	RefSeq	gene	1939129	1939683	.	-	.	ID=gene1764;Name=YPD4_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08860;old_locus_tag=YPD4_1509
NC_017154.1	Protein Homology	CDS	1939129	1939683	.	-	0	ID=cds1734;Parent=gene1764;Dbxref=Genbank:WP_002210852.1;Name=WP_002210852.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210852.1;transl_table=11
NC_017154.1	RefSeq	gene	1940162	1942813	.	-	.	ID=gene1765;Name=YPD4_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08865;old_locus_tag=YPD4_1510
NC_017154.1	Protein Homology	CDS	1940162	1942813	.	-	0	ID=cds1735;Parent=gene1765;Dbxref=Genbank:WP_002216616.1;Name=WP_002216616.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216616.1;transl_table=11
NC_017154.1	RefSeq	gene	1942782	1944029	.	-	.	ID=gene1766;Name=YPD4_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08870;old_locus_tag=YPD4_1511
NC_017154.1	Protein Homology	CDS	1942782	1944029	.	-	0	ID=cds1736;Parent=gene1766;Dbxref=Genbank:WP_002367629.1;Name=WP_002367629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002367629.1;transl_table=11
NC_017154.1	RefSeq	gene	1944261	1944758	.	+	.	ID=gene1767;Name=YPD4_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08875;old_locus_tag=YPD4_1512
NC_017154.1	Protein Homology	CDS	1944261	1944758	.	+	0	ID=cds1737;Parent=gene1767;Dbxref=Genbank:WP_002210850.1;Name=WP_002210850.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002210850.1;transl_table=11
NC_017154.1	RefSeq	gene	1944854	1945567	.	+	.	ID=gene1768;Name=YPD4_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08880;old_locus_tag=YPD4_1513
NC_017154.1	Protein Homology	CDS	1944854	1945567	.	+	0	ID=cds1738;Parent=gene1768;Dbxref=Genbank:WP_002210849.1;Name=WP_002210849.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11
NC_017154.1	RefSeq	gene	1945587	1947659	.	+	.	ID=gene1769;Name=YPD4_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08885;old_locus_tag=YPD4_1514
NC_017154.1	Protein Homology	CDS	1945587	1947659	.	+	0	ID=cds1739;Parent=gene1769;Dbxref=Genbank:WP_015683920.1;Name=WP_015683920.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=carboxyl-terminal processing protease;protein_id=WP_015683920.1;transl_table=11
NC_017154.1	RefSeq	gene	1948133	1949014	.	+	.	ID=gene1770;Name=YPD4_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08890;old_locus_tag=YPD4_1515
NC_017154.1	Protein Homology	CDS	1948133	1949014	.	+	0	ID=cds1740;Parent=gene1770;Dbxref=Genbank:WP_002210847.1;Name=WP_002210847.1;Note=metalloprotease;gbkey=CDS;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11
NC_017154.1	RefSeq	gene	1949672	1950214	.	+	.	ID=gene1771;Name=YPD4_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08895;old_locus_tag=YPD4_1516
NC_017154.1	Protein Homology	CDS	1949672	1950214	.	+	0	ID=cds1741;Parent=gene1771;Dbxref=Genbank:WP_002210846.1;Name=WP_002210846.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002210846.1;transl_table=11
NC_017154.1	RefSeq	gene	1950460	1951146	.	+	.	ID=gene1772;Name=YPD4_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08900;old_locus_tag=YPD4_1517
NC_017154.1	Protein Homology	CDS	1950460	1951146	.	+	0	ID=cds1742;Parent=gene1772;Dbxref=Genbank:WP_002354110.1;Name=WP_002354110.1;gbkey=CDS;product=fimbrial assembly protein StbE;protein_id=WP_002354110.1;transl_table=11
NC_017154.1	RefSeq	gene	1951228	1953840	.	+	.	ID=gene1773;Name=YPD4_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08905;old_locus_tag=YPD4_1518
NC_017154.1	Protein Homology	CDS	1951228	1953840	.	+	0	ID=cds1743;Parent=gene1773;Dbxref=Genbank:WP_002210844.1;Name=WP_002210844.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210844.1;transl_table=11
NC_017154.1	RefSeq	gene	1953837	1955000	.	+	.	ID=gene1774;Name=YPD4_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08910;old_locus_tag=YPD4_1519
NC_017154.1	Protein Homology	CDS	1953837	1955000	.	+	0	ID=cds1744;Parent=gene1774;Dbxref=Genbank:WP_002215120.1;Name=WP_002215120.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215120.1;transl_table=11
NC_017154.1	RefSeq	gene	1954997	1955800	.	+	.	ID=gene1775;Name=YPD4_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08915;old_locus_tag=YPD4_1520
NC_017154.1	Protein Homology	CDS	1954997	1955800	.	+	0	ID=cds1745;Parent=gene1775;Dbxref=Genbank:WP_002210843.1;Name=WP_002210843.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210843.1;transl_table=11
NC_017154.1	RefSeq	gene	1955854	1957220	.	-	.	ID=gene1776;Name=YPD4_RS08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS08920;pseudo=true
NC_017154.1	Protein Homology	CDS	1955854	1957220	.	-	0	ID=cds1746;Parent=gene1776;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug MFS transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1957546	1958712	.	+	.	ID=gene1777;Name=YPD4_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08925;old_locus_tag=YPD4_1523
NC_017154.1	Protein Homology	CDS	1957546	1958712	.	+	0	ID=cds1747;Parent=gene1777;Dbxref=Genbank:WP_002210841.1;Name=WP_002210841.1;gbkey=CDS;product=oligogalacturonate lyase;protein_id=WP_002210841.1;transl_table=11
NC_017154.1	RefSeq	gene	1958899	1959690	.	+	.	ID=gene1778;Name=YPD4_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08930;old_locus_tag=YPD4_1524
NC_017154.1	Protein Homology	CDS	1958899	1959690	.	+	0	ID=cds1748;Parent=gene1778;Dbxref=Genbank:WP_002210840.1;Name=WP_002210840.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002210840.1;transl_table=11
NC_017154.1	RefSeq	gene	1960093	1960944	.	+	.	ID=gene1779;Name=YPD4_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08935;old_locus_tag=YPD4_1525
NC_017154.1	Protein Homology	CDS	1960093	1960944	.	+	0	ID=cds1749;Parent=gene1779;Dbxref=Genbank:WP_002210839.1;Name=WP_002210839.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210839.1;transl_table=11
NC_017154.1	RefSeq	gene	1961159	1962550	.	-	.	ID=gene1780;Name=YPD4_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08940;old_locus_tag=YPD4_1526
NC_017154.1	Protein Homology	CDS	1961159	1962550	.	-	0	ID=cds1750;Parent=gene1780;Dbxref=Genbank:WP_002210838.1;Name=WP_002210838.1;gbkey=CDS;product=L-cystine transporter tcyP;protein_id=WP_002210838.1;transl_table=11
NC_017154.1	RefSeq	gene	1962754	1963302	.	-	.	ID=gene1781;Name=YPD4_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08945;old_locus_tag=YPD4_1527
NC_017154.1	Protein Homology	CDS	1962754	1963302	.	-	0	ID=cds1751;Parent=gene1781;Dbxref=Genbank:WP_002210837.1;Name=WP_002210837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210837.1;transl_table=11
NC_017154.1	RefSeq	gene	1963782	1964492	.	-	.	ID=gene1782;Name=YPD4_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08950;old_locus_tag=YPD4_1528
NC_017154.1	Protein Homology	CDS	1963782	1964492	.	-	0	ID=cds1752;Parent=gene1782;Dbxref=Genbank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;product=porin;protein_id=WP_002210836.1;transl_table=11
NC_017154.1	RefSeq	gene	1964790	1966082	.	-	.	ID=gene1783;Name=YPD4_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08955;old_locus_tag=YPD4_1529
NC_017154.1	Protein Homology	CDS	1964790	1966082	.	-	0	ID=cds1753;Parent=gene1783;Dbxref=Genbank:WP_002210835.1;Name=WP_002210835.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210835.1;transl_table=11
NC_017154.1	RefSeq	gene	1966098	1967225	.	-	.	ID=gene1784;Name=YPD4_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08960;old_locus_tag=YPD4_1530
NC_017154.1	Protein Homology	CDS	1966098	1967225	.	-	0	ID=cds1754;Parent=gene1784;Dbxref=Genbank:WP_002210834.1;Name=WP_002210834.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11
NC_017154.1	RefSeq	gene	1967239	1968159	.	-	.	ID=gene1785;Name=YPD4_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08965;old_locus_tag=YPD4_1531
NC_017154.1	Protein Homology	CDS	1967239	1968159	.	-	0	ID=cds1755;Parent=gene1785;Dbxref=Genbank:WP_002210833.1;Name=WP_002210833.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210833.1;transl_table=11
NC_017154.1	RefSeq	gene	1968152	1969042	.	-	.	ID=gene1786;Name=YPD4_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08970;old_locus_tag=YPD4_1532
NC_017154.1	Protein Homology	CDS	1968152	1969042	.	-	0	ID=cds1756;Parent=gene1786;Dbxref=Genbank:WP_002210832.1;Name=WP_002210832.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210832.1;transl_table=11
NC_017154.1	RefSeq	gene	1969083	1970750	.	-	.	ID=gene1787;Name=YPD4_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08975;old_locus_tag=YPD4_1533
NC_017154.1	Protein Homology	CDS	1969083	1970750	.	-	0	ID=cds1757;Parent=gene1787;Dbxref=Genbank:WP_002210831.1;Name=WP_002210831.1;gbkey=CDS;product=pectate disaccharide-lyase;protein_id=WP_002210831.1;transl_table=11
NC_017154.1	RefSeq	gene	1971086	1971847	.	-	.	ID=gene1788;Name=YPD4_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08980;old_locus_tag=YPD4_1534
NC_017154.1	Protein Homology	CDS	1971086	1971847	.	-	0	ID=cds1758;Parent=gene1788;Dbxref=Genbank:WP_002210830.1;Name=WP_002210830.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002210830.1;transl_table=11
NC_017154.1	RefSeq	gene	1971939	1972775	.	-	.	ID=gene1789;Name=YPD4_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08985;old_locus_tag=YPD4_1535
NC_017154.1	Protein Homology	CDS	1971939	1972775	.	-	0	ID=cds1759;Parent=gene1789;Dbxref=Genbank:WP_002210829.1;Name=WP_002210829.1;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;gbkey=CDS;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=WP_002210829.1;transl_table=11
NC_017154.1	RefSeq	gene	1973111	1973461	.	+	.	ID=gene1790;Name=YPD4_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08990;old_locus_tag=YPD4_1536
NC_017154.1	Protein Homology	CDS	1973111	1973461	.	+	0	ID=cds1760;Parent=gene1790;Dbxref=Genbank:WP_002210828.1;Name=WP_002210828.1;gbkey=CDS;product=pectin degradation protein kdgF;protein_id=WP_002210828.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1973434	1974759	.	+	.	ID=id149;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1973509	1974717	.	+	.	ID=gene1791;Name=YPD4_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS08995;old_locus_tag=YPD4_1537
NC_017154.1	Protein Homology	CDS	1973509	1974717	.	+	0	ID=cds1761;Parent=gene1791;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	1975192	1976079	.	+	.	ID=gene1792;Name=YPD4_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09000;old_locus_tag=YPD4_1538
NC_017154.1	Protein Homology	CDS	1975192	1976079	.	+	0	ID=cds1762;Parent=gene1792;Dbxref=Genbank:WP_002216469.1;Name=WP_002216469.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216469.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	1976004	1977963	.	+	.	ID=id150;gbkey=repeat_region
NC_017154.1	RefSeq	gene	1976093	1977115	.	+	.	ID=gene1793;Name=YPD4_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09005;old_locus_tag=YPD4_1539
NC_017154.1	Protein Homology	CDS	1976093	1977115	.	+	0	ID=cds1763;Parent=gene1793;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	1977115	1977894	.	+	.	ID=gene1794;Name=YPD4_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09010;old_locus_tag=YPD4_1540
NC_017154.1	Protein Homology	CDS	1977115	1977894	.	+	0	ID=cds1764;Parent=gene1794;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	1977910	1978167	.	+	.	ID=gene1795;Name=YPD4_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09015
NC_017154.1	Protein Homology	CDS	1977910	1978167	.	+	0	ID=cds1765;Parent=gene1795;Dbxref=Genbank:WP_002224323.1;Name=WP_002224323.1;gbkey=CDS;product=ThuR%2C regulatory protein for trehalosemaltose transport;protein_id=WP_002224323.1;transl_table=11
NC_017154.1	RefSeq	gene	1978310	1978385	.	-	.	ID=gene1796;Name=YPD4_RS09020;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS09020;old_locus_tag=YPD4_t23
NC_017154.1	tRNAscan-SE	tRNA	1978310	1978385	.	-	.	ID=rna28;Parent=gene1796;anticodon=(pos:complement(1978350..1978352));gbkey=tRNA;product=tRNA-Asn
NC_017154.1	tRNAscan-SE	exon	1978310	1978385	.	-	.	ID=id151;Parent=rna28;anticodon=(pos:complement(1978350..1978352));gbkey=tRNA;product=tRNA-Asn
NC_017154.1	RefSeq	gene	1978563	1979375	.	-	.	ID=gene1797;Name=YPD4_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09025;old_locus_tag=YPD4_1541
NC_017154.1	Protein Homology	CDS	1978563	1979375	.	-	0	ID=cds1766;Parent=gene1797;Dbxref=Genbank:WP_002211042.1;Name=WP_002211042.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=protein MtfA;protein_id=WP_002211042.1;transl_table=11
NC_017154.1	RefSeq	gene	1979765	1980049	.	-	.	ID=gene1798;Name=YPD4_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09030
NC_017154.1	Protein Homology	CDS	1979765	1980049	.	-	0	ID=cds1767;Parent=gene1798;Dbxref=Genbank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211043.1;transl_table=11
NC_017154.1	RefSeq	gene	1980286	1981137	.	-	.	ID=gene1799;Name=YPD4_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09035;old_locus_tag=YPD4_1542
NC_017154.1	Protein Homology	CDS	1980286	1981137	.	-	0	ID=cds1768;Parent=gene1799;Dbxref=Genbank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;product=RIO1 family protein kinase;protein_id=WP_002211044.1;transl_table=11
NC_017154.1	RefSeq	gene	1981240	1982958	.	-	.	ID=gene1800;Name=YPD4_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09040;old_locus_tag=YPD4_1543
NC_017154.1	Protein Homology	CDS	1981240	1982958	.	-	0	ID=cds1769;Parent=gene1800;Dbxref=Genbank:WP_002211045.1;Name=WP_002211045.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211045.1;transl_table=11
NC_017154.1	RefSeq	gene	1983614	1983778	.	+	.	ID=gene1801;Name=YPD4_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09045
NC_017154.1	Protein Homology	CDS	1983614	1983778	.	+	0	ID=cds1770;Parent=gene1801;Dbxref=Genbank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211047.1;transl_table=11
NC_017154.1	RefSeq	gene	1983860	1984246	.	-	.	ID=gene1802;Name=YPD4_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09050;old_locus_tag=YPD4_1544
NC_017154.1	Protein Homology	CDS	1983860	1984246	.	-	0	ID=cds1771;Parent=gene1802;Dbxref=Genbank:WP_002211048.1;Name=WP_002211048.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211048.1;transl_table=11
NC_017154.1	RefSeq	gene	1984477	1984590	.	+	.	ID=gene1803;Name=YPD4_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09055
NC_017154.1	Protein Homology	CDS	1984477	1984590	.	+	0	ID=cds1772;Parent=gene1803;Dbxref=Genbank:WP_002211049.1;Name=WP_002211049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211049.1;transl_table=11
NC_017154.1	RefSeq	gene	1984802	1985041	.	+	.	ID=gene1804;Name=YPD4_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09060
NC_017154.1	Protein Homology	CDS	1984802	1985041	.	+	0	ID=cds1773;Parent=gene1804;Dbxref=Genbank:WP_002211050.1;Name=WP_002211050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211050.1;transl_table=11
NC_017154.1	RefSeq	gene	1985132	1985365	.	-	.	ID=gene1805;Name=YPD4_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09065
NC_017154.1	Protein Homology	CDS	1985132	1985365	.	-	0	ID=cds1774;Parent=gene1805;Dbxref=Genbank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216493.1;transl_table=11
NC_017154.1	RefSeq	gene	1985948	1986223	.	+	.	ID=gene1806;Name=YPD4_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09070
NC_017154.1	Protein Homology	CDS	1985948	1986223	.	+	0	ID=cds1775;Parent=gene1806;Dbxref=Genbank:WP_002216495.1;Name=WP_002216495.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216495.1;transl_table=11
NC_017154.1	RefSeq	gene	1986486	1986785	.	+	.	ID=gene1807;Name=YPD4_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09075
NC_017154.1	Protein Homology	CDS	1986486	1986785	.	+	0	ID=cds1776;Parent=gene1807;Dbxref=Genbank:WP_002211053.1;Name=WP_002211053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211053.1;transl_table=11
NC_017154.1	RefSeq	gene	1986894	1987139	.	+	.	ID=gene1808;Name=YPD4_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09080
NC_017154.1	Protein Homology	CDS	1986894	1987139	.	+	0	ID=cds1777;Parent=gene1808;Dbxref=Genbank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211054.1;transl_table=11
NC_017154.1	RefSeq	gene	1987376	1988748	.	+	.	ID=gene1809;Name=YPD4_RS09085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS09085;pseudo=true
NC_017154.1	Protein Homology	CDS	1987376	1988748	.	+	0	ID=cds1778;Parent=gene1809;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aromatic amino acid transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	1989053	1989652	.	-	.	ID=gene1810;Name=YPD4_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09090;old_locus_tag=YPD4_1547
NC_017154.1	Protein Homology	CDS	1989053	1989652	.	-	0	ID=cds1779;Parent=gene1810;Dbxref=Genbank:WP_002221007.1;Name=WP_002221007.1;gbkey=CDS;product=lipid A palmitoyltransferase PagP;protein_id=WP_002221007.1;transl_table=11
NC_017154.1	RefSeq	gene	1989667	1989888	.	+	.	ID=gene1811;Name=YPD4_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09095
NC_017154.1	Protein Homology	CDS	1989667	1989888	.	+	0	ID=cds1780;Parent=gene1811;Dbxref=Genbank:WP_002430102.1;Name=WP_002430102.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430102.1;transl_table=11
NC_017154.1	cmsearch	region	1990640	1991068	.	+	.	ID=id152;Note=cspA;gbkey=misc_feature
NC_017154.1	RefSeq	gene	1990657	1990773	.	+	.	ID=gene1812;Name=YPD4_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09100
NC_017154.1	Protein Homology	CDS	1990657	1990773	.	+	0	ID=cds1781;Parent=gene1812;Dbxref=Genbank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211058.1;transl_table=11
NC_017154.1	RefSeq	gene	1990816	1991025	.	+	.	ID=gene1813;Name=YPD4_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09105
NC_017154.1	Protein Homology	CDS	1990816	1991025	.	+	0	ID=cds1782;Parent=gene1813;Dbxref=Genbank:WP_002221949.1;Name=WP_002221949.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002221949.1;transl_table=11
NC_017154.1	RefSeq	gene	1991116	1991871	.	-	.	ID=gene1814;Name=YPD4_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09110;old_locus_tag=YPD4_1548
NC_017154.1	Protein Homology	CDS	1991116	1991871	.	-	0	ID=cds1783;Parent=gene1814;Dbxref=Genbank:WP_002211060.1;Name=WP_002211060.1;gbkey=CDS;product=polyphenol oxidoreductase;protein_id=WP_002211060.1;transl_table=11
NC_017154.1	RefSeq	gene	1992266	1993105	.	+	.	ID=gene1815;Name=YPD4_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09115;old_locus_tag=YPD4_1549
NC_017154.1	Protein Homology	CDS	1992266	1993105	.	+	0	ID=cds1784;Parent=gene1815;Dbxref=Genbank:WP_002211061.1;Name=WP_002211061.1;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_002211061.1;transl_table=11
NC_017154.1	RefSeq	gene	1993327	1993605	.	-	.	ID=gene1816;Name=YPD4_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09120
NC_017154.1	Protein Homology	CDS	1993327	1993605	.	-	0	ID=cds1785;Parent=gene1816;Dbxref=Genbank:WP_002211062.1;Name=WP_002211062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211062.1;transl_table=11
NC_017154.1	RefSeq	gene	1993827	1995908	.	-	.	ID=gene1817;Name=YPD4_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09125;old_locus_tag=YPD4_1550
NC_017154.1	Protein Homology	CDS	1993827	1995908	.	-	0	ID=cds1786;Parent=gene1817;Dbxref=Genbank:WP_002211063.1;Name=WP_002211063.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211063.1;transl_table=11
NC_017154.1	RefSeq	gene	1996330	1998543	.	+	.	ID=gene1818;Name=YPD4_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09130;old_locus_tag=YPD4_1551
NC_017154.1	Protein Homology	CDS	1996330	1998543	.	+	0	ID=cds1787;Parent=gene1818;Dbxref=Genbank:WP_002211064.1;Name=WP_002211064.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211064.1;transl_table=11
NC_017154.1	RefSeq	gene	1998704	1999273	.	-	.	ID=gene1819;Name=YPD4_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09135;old_locus_tag=YPD4_1552
NC_017154.1	Protein Homology	CDS	1998704	1999273	.	-	0	ID=cds1788;Parent=gene1819;Dbxref=Genbank:WP_002211065.1;Name=WP_002211065.1;Note=membrane protein YebN;gbkey=CDS;product=membrane protein;protein_id=WP_002211065.1;transl_table=11
NC_017154.1	RefSeq	gene	1999702	2000163	.	-	.	ID=gene1820;Name=YPD4_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09140;old_locus_tag=YPD4_1553
NC_017154.1	Protein Homology	CDS	1999702	2000163	.	-	0	ID=cds1789;Parent=gene1820;Dbxref=Genbank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211066.1;transl_table=11
NC_017154.1	RefSeq	gene	2000363	2001241	.	-	.	ID=gene1821;Name=YPD4_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09145;old_locus_tag=YPD4_1554
NC_017154.1	Protein Homology	CDS	2000363	2001241	.	-	0	ID=cds1790;Parent=gene1821;Dbxref=Genbank:WP_002211067.1;Name=WP_002211067.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11
NC_017154.1	RefSeq	gene	2001257	2002054	.	-	.	ID=gene1822;Name=YPD4_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09150;old_locus_tag=YPD4_1555
NC_017154.1	Protein Homology	CDS	2001257	2002054	.	-	0	ID=cds1791;Parent=gene1822;Dbxref=Genbank:WP_015683925.1;Name=WP_015683925.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_015683925.1;transl_table=11
NC_017154.1	RefSeq	gene	2002146	2003120	.	-	.	ID=gene1823;Name=YPD4_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09155;old_locus_tag=YPD4_1556
NC_017154.1	Protein Homology	CDS	2002146	2003120	.	-	0	ID=cds1792;Parent=gene1823;Dbxref=Genbank:WP_002211069.1;Name=WP_002211069.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose transporter subunit IIAB;protein_id=WP_002211069.1;transl_table=11
NC_017154.1	RefSeq	gene	2003909	2005285	.	+	.	ID=gene1824;Name=YPD4_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09160;old_locus_tag=YPD4_1557
NC_017154.1	Protein Homology	CDS	2003909	2005285	.	+	0	ID=cds1793;Parent=gene1824;Dbxref=Genbank:WP_002358805.1;Name=WP_002358805.1;gbkey=CDS;product=membrane protein;protein_id=WP_002358805.1;transl_table=11
NC_017154.1	RefSeq	gene	2005387	2005854	.	-	.	ID=gene1825;Name=YPD4_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09165;old_locus_tag=YPD4_1558
NC_017154.1	Protein Homology	CDS	2005387	2005854	.	-	0	ID=cds1794;Parent=gene1825;Dbxref=Genbank:WP_002211070.1;Name=WP_002211070.1;gbkey=CDS;product=homoprotocatechuate degradative operon repressor;protein_id=WP_002211070.1;transl_table=11
NC_017154.1	RefSeq	gene	2006238	2006870	.	+	.	ID=gene1826;Name=YPD4_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09170;old_locus_tag=YPD4_1559
NC_017154.1	Protein Homology	CDS	2006238	2006870	.	+	0	ID=cds1795;Parent=gene1826;Dbxref=Genbank:WP_002214880.1;Name=WP_002214880.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002214880.1;transl_table=11
NC_017154.1	RefSeq	gene	2006867	2007631	.	+	.	ID=gene1827;Name=YPD4_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09175;old_locus_tag=YPD4_1560
NC_017154.1	Protein Homology	CDS	2006867	2007631	.	+	0	ID=cds1796;Parent=gene1827;Dbxref=Genbank:WP_002214882.1;Name=WP_002214882.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002214882.1;transl_table=11
NC_017154.1	RefSeq	gene	2007628	2009025	.	+	.	ID=gene1828;Name=YPD4_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09180;old_locus_tag=YPD4_1561
NC_017154.1	Protein Homology	CDS	2007628	2009025	.	+	0	ID=cds1797;Parent=gene1828;Dbxref=Genbank:WP_002211071.1;Name=WP_002211071.1;Note=catalyzes the formation of betaine from betaine aldehyde;gbkey=CDS;product=betaine-aldehyde dehydrogenase;protein_id=WP_002211071.1;transl_table=11
NC_017154.1	RefSeq	gene	2009144	2010001	.	+	.	ID=gene1829;Name=YPD4_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09185;old_locus_tag=YPD4_1562
NC_017154.1	Protein Homology	CDS	2009144	2010001	.	+	0	ID=cds1798;Parent=gene1829;Dbxref=Genbank:WP_002211072.1;Name=WP_002211072.1;gbkey=CDS;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_002211072.1;transl_table=11
NC_017154.1	RefSeq	gene	2010026	2010424	.	+	.	ID=gene1830;Name=YPD4_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09190;old_locus_tag=YPD4_1563
NC_017154.1	Protein Homology	CDS	2010026	2010424	.	+	0	ID=cds1799;Parent=gene1830;Dbxref=Genbank:WP_002211073.1;Name=WP_002211073.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=WP_002211073.1;transl_table=11
NC_017154.1	RefSeq	gene	2010418	2011221	.	+	.	ID=gene1831;Name=YPD4_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09195;old_locus_tag=YPD4_1564
NC_017154.1	Protein Homology	CDS	2010418	2011221	.	+	0	ID=cds1800;Parent=gene1831;Dbxref=Genbank:WP_002211074.1;Name=WP_002211074.1;gbkey=CDS;product=2-oxo-hept-3-ene-1%2C7-dioate hydratase;protein_id=WP_002211074.1;transl_table=11
NC_017154.1	RefSeq	gene	2011232	2012038	.	+	.	ID=gene1832;Name=YPD4_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09200;old_locus_tag=YPD4_1565
NC_017154.1	Protein Homology	CDS	2011232	2012038	.	+	0	ID=cds1801;Parent=gene1832;Dbxref=Genbank:WP_002211075.1;Name=WP_002211075.1;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=WP_002211075.1;transl_table=11
NC_017154.1	RefSeq	gene	2012064	2013431	.	+	.	ID=gene1833;Name=YPD4_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09205;old_locus_tag=YPD4_1566
NC_017154.1	Protein Homology	CDS	2012064	2013431	.	+	0	ID=cds1802;Parent=gene1833;Dbxref=Genbank:WP_002211076.1;Name=WP_002211076.1;gbkey=CDS;product=4-hydroxyphenylacetate permease;protein_id=WP_002211076.1;transl_table=11
NC_017154.1	RefSeq	gene	2013499	2015061	.	+	.	ID=gene1834;Name=YPD4_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09210;old_locus_tag=YPD4_1567
NC_017154.1	Protein Homology	CDS	2013499	2015061	.	+	0	ID=cds1803;Parent=gene1834;Dbxref=Genbank:WP_002211077.1;Name=WP_002211077.1;gbkey=CDS;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211077.1;transl_table=11
NC_017154.1	RefSeq	gene	2015082	2015579	.	+	.	ID=gene1835;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=YPD4_RS09215;old_locus_tag=YPD4_1568
NC_017154.1	Protein Homology	CDS	2015082	2015579	.	+	0	ID=cds1804;Parent=gene1835;Dbxref=Genbank:WP_002211078.1;Name=WP_002211078.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211078.1;transl_table=11
NC_017154.1	RefSeq	gene	2015859	2017223	.	-	.	ID=gene1836;Name=YPD4_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09220;old_locus_tag=YPD4_1569
NC_017154.1	Protein Homology	CDS	2015859	2017223	.	-	0	ID=cds1805;Parent=gene1836;Dbxref=Genbank:WP_002211079.1;Name=WP_002211079.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase;protein_id=WP_002211079.1;transl_table=11
NC_017154.1	RefSeq	gene	2017931	2018530	.	-	.	ID=gene1837;Name=YPD4_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09225;old_locus_tag=YPD4_1570
NC_017154.1	Protein Homology	CDS	2017931	2018530	.	-	0	ID=cds1806;Parent=gene1837;Dbxref=Genbank:WP_002211080.1;Name=WP_002211080.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002211080.1;transl_table=11
NC_017154.1	RefSeq	gene	2018527	2019903	.	-	.	ID=gene1838;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=YPD4_RS09230;old_locus_tag=YPD4_1571
NC_017154.1	Protein Homology	CDS	2018527	2019903	.	-	0	ID=cds1807;Parent=gene1838;Dbxref=Genbank:WP_002211081.1;Name=WP_002211081.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase subunit I;protein_id=WP_002211081.1;transl_table=11
NC_017154.1	RefSeq	gene	2020068	2020325	.	+	.	ID=gene1839;Name=YPD4_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09235
NC_017154.1	Protein Homology	CDS	2020068	2020325	.	+	0	ID=cds1808;Parent=gene1839;Dbxref=Genbank:WP_002211082.1;Name=WP_002211082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211082.1;transl_table=11
NC_017154.1	RefSeq	gene	2020451	2021632	.	-	.	ID=gene1840;Name=YPD4_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09240;old_locus_tag=YPD4_1572
NC_017154.1	Protein Homology	CDS	2020451	2021632	.	-	0	ID=cds1809;Parent=gene1840;Dbxref=Genbank:WP_002211083.1;Name=WP_002211083.1;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_002211083.1;transl_table=11
NC_017154.1	RefSeq	gene	2021945	2023327	.	+	.	ID=gene1841;Name=YPD4_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09245;old_locus_tag=YPD4_1573
NC_017154.1	Protein Homology	CDS	2021945	2023327	.	+	0	ID=cds1810;Parent=gene1841;Dbxref=Genbank:WP_002211084.1;Name=WP_002211084.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;product=RNA helicase;protein_id=WP_002211084.1;transl_table=11
NC_017154.1	RefSeq	gene	2023421	2023741	.	+	.	ID=gene1842;Name=YPD4_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09250;old_locus_tag=YPD4_1574
NC_017154.1	Protein Homology	CDS	2023421	2023741	.	+	0	ID=cds1811;Parent=gene1842;Dbxref=Genbank:WP_002211085.1;Name=WP_002211085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211085.1;transl_table=11
NC_017154.1	RefSeq	gene	2023781	2024089	.	+	.	ID=gene1843;Name=YPD4_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09255;old_locus_tag=YPD4_1575
NC_017154.1	Protein Homology	CDS	2023781	2024089	.	+	0	ID=cds1812;Parent=gene1843;Dbxref=Genbank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211086.1;transl_table=11
NC_017154.1	RefSeq	gene	2024181	2024606	.	+	.	ID=gene1844;Name=YPD4_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09260;old_locus_tag=YPD4_1576
NC_017154.1	Protein Homology	CDS	2024181	2024606	.	+	0	ID=cds1813;Parent=gene1844;Dbxref=Genbank:WP_002211087.1;Name=WP_002211087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211087.1;transl_table=11
NC_017154.1	RefSeq	gene	2024916	2026967	.	+	.	ID=gene1845;Name=YPD4_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09265;old_locus_tag=YPD4_1577
NC_017154.1	Protein Homology	CDS	2024916	2026967	.	+	0	ID=cds1814;Parent=gene1845;Dbxref=Genbank:WP_002211088.1;Name=WP_002211088.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;product=oligopeptidase B;protein_id=WP_002211088.1;transl_table=11
NC_017154.1	RefSeq	gene	2027689	2028639	.	+	.	ID=gene1846;Name=YPD4_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09270;old_locus_tag=YPD4_1578
NC_017154.1	Protein Homology	CDS	2027689	2028639	.	+	0	ID=cds1815;Parent=gene1846;Dbxref=Genbank:WP_002211090.1;Name=WP_002211090.1;gbkey=CDS;product=proline iminopeptidase;protein_id=WP_002211090.1;transl_table=11
NC_017154.1	RefSeq	gene	2028699	2028929	.	-	.	ID=gene1847;Name=YPD4_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09275
NC_017154.1	Protein Homology	CDS	2028699	2028929	.	-	0	ID=cds1816;Parent=gene1847;Dbxref=Genbank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11
NC_017154.1	RefSeq	gene	2029330	2029839	.	+	.	ID=gene1848;Name=YPD4_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09280;old_locus_tag=YPD4_1579
NC_017154.1	Protein Homology	CDS	2029330	2029839	.	+	0	ID=cds1817;Parent=gene1848;Dbxref=Genbank:WP_002211092.1;Name=WP_002211092.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=ferritin;protein_id=WP_002211092.1;transl_table=11
NC_017154.1	RefSeq	gene	2030236	2030622	.	+	.	ID=gene1849;Name=YPD4_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09285;old_locus_tag=YPD4_1580
NC_017154.1	Protein Homology	CDS	2030236	2030622	.	+	0	ID=cds1818;Parent=gene1849;Dbxref=Genbank:WP_002211093.1;Name=WP_002211093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211093.1;transl_table=11
NC_017154.1	RefSeq	gene	2030625	2031509	.	+	.	ID=gene1850;Name=YPD4_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09290;old_locus_tag=YPD4_1581
NC_017154.1	Protein Homology	CDS	2030625	2031509	.	+	0	ID=cds1819;Parent=gene1850;Dbxref=Genbank:WP_002211094.1;Name=WP_002211094.1;gbkey=CDS;product=copper resistance protein D;protein_id=WP_002211094.1;transl_table=11
NC_017154.1	RefSeq	gene	2031606	2031947	.	+	.	ID=gene1851;Name=YPD4_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09295;old_locus_tag=YPD4_1582
NC_017154.1	Protein Homology	CDS	2031606	2031947	.	+	0	ID=cds1820;Parent=gene1851;Dbxref=Genbank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211095.1;transl_table=11
NC_017154.1	RefSeq	gene	2032227	2032456	.	+	.	ID=gene1852;Name=YPD4_RS09300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS09300;pseudo=true
NC_017154.1	Protein Homology	CDS	2032227	2032456	.	+	0	ID=cds1821;Parent=gene1852;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2032469	2032795	.	-	.	ID=gene1853;Name=YPD4_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09305;old_locus_tag=YPD4_1583
NC_017154.1	Protein Homology	CDS	2032469	2032795	.	-	0	ID=cds1822;Parent=gene1853;Dbxref=Genbank:WP_002211097.1;Name=WP_002211097.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002211097.1;transl_table=11
NC_017154.1	RefSeq	gene	2032789	2033247	.	-	.	ID=gene1854;Name=YPD4_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09310;old_locus_tag=YPD4_1584
NC_017154.1	Protein Homology	CDS	2032789	2033247	.	-	0	ID=cds1823;Parent=gene1854;Dbxref=Genbank:WP_002211098.1;Name=WP_002211098.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211098.1;transl_table=11
NC_017154.1	RefSeq	gene	2033779	2034939	.	+	.	ID=gene1855;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=YPD4_RS09315;old_locus_tag=YPD4_1585
NC_017154.1	Protein Homology	CDS	2033779	2034939	.	+	0	ID=cds1824;Parent=gene1855;Dbxref=Genbank:WP_002211099.1;Name=WP_002211099.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211099.1;transl_table=11
NC_017154.1	RefSeq	gene	2034939	2037017	.	+	.	ID=gene1856;Name=YPD4_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09320;old_locus_tag=YPD4_1586
NC_017154.1	Protein Homology	CDS	2034939	2037017	.	+	0	ID=cds1825;Parent=gene1856;Dbxref=Genbank:WP_002211100.1;Name=WP_002211100.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_002211100.1;transl_table=11
NC_017154.1	RefSeq	gene	2037017	2037439	.	+	.	ID=gene1857;Name=YPD4_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09325;old_locus_tag=YPD4_1587
NC_017154.1	Protein Homology	CDS	2037017	2037439	.	+	0	ID=cds1826;Parent=gene1857;Dbxref=Genbank:WP_002211101.1;Name=WP_002211101.1;gbkey=CDS;product=flagellar biosynthesis protein FlhE;protein_id=WP_002211101.1;transl_table=11
NC_017154.1	RefSeq	gene	2038103	2039107	.	+	.	ID=gene1858;Name=YPD4_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09330;old_locus_tag=YPD4_1588
NC_017154.1	Protein Homology	CDS	2038103	2039107	.	+	0	ID=cds1827;Parent=gene1858;Dbxref=Genbank:WP_011566188.1;Name=WP_011566188.1;gbkey=CDS;product=invasin;protein_id=WP_011566188.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2038947	2039668	.	+	.	ID=id153;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2039097	2039555	.	+	.	ID=gene1859;Name=YPD4_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09335;old_locus_tag=YPD4_1589
NC_017154.1	Protein Homology	CDS	2039097	2039555	.	+	0	ID=cds1828;Parent=gene1859;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	2039645	2041717	.	+	.	ID=gene1860;Name=YPD4_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09340;old_locus_tag=YPD4_1590
NC_017154.1	Protein Homology	CDS	2039645	2041717	.	+	0	ID=cds1829;Parent=gene1860;Dbxref=Genbank:WP_002211106.1;Name=WP_002211106.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211106.1;transl_table=11
NC_017154.1	RefSeq	gene	2041907	2042347	.	-	.	ID=gene1861;Name=YPD4_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09345;old_locus_tag=YPD4_1591
NC_017154.1	Protein Homology	CDS	2041907	2042347	.	-	0	ID=cds1830;Parent=gene1861;Dbxref=Genbank:WP_002211107.1;Name=WP_002211107.1;Note=export chaperone for FlgK and FlgL;gbkey=CDS;product=flagellar synthesis protein FlgN;protein_id=WP_002211107.1;transl_table=11
NC_017154.1	RefSeq	gene	2042366	2042668	.	-	.	ID=gene1862;Name=YPD4_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09350;old_locus_tag=YPD4_1592
NC_017154.1	Protein Homology	CDS	2042366	2042668	.	-	0	ID=cds1831;Parent=gene1862;Dbxref=Genbank:WP_002211108.1;Name=WP_002211108.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211108.1;transl_table=11
NC_017154.1	RefSeq	gene	2042819	2043517	.	-	.	ID=gene1863;Name=YPD4_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09355;old_locus_tag=YPD4_1593
NC_017154.1	Protein Homology	CDS	2042819	2043517	.	-	0	ID=cds1832;Parent=gene1863;Dbxref=Genbank:WP_002227966.1;Name=WP_002227966.1;gbkey=CDS;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002227966.1;transl_table=11
NC_017154.1	RefSeq	gene	2043756	2044169	.	+	.	ID=gene1864;Name=YPD4_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09360;old_locus_tag=YPD4_1594
NC_017154.1	Protein Homology	CDS	2043756	2044169	.	+	0	ID=cds1833;Parent=gene1864;Dbxref=Genbank:WP_002211110.1;Name=WP_002211110.1;gbkey=CDS;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211110.1;transl_table=11
NC_017154.1	RefSeq	gene	2044175	2044579	.	+	.	ID=gene1865;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=YPD4_RS09365;old_locus_tag=YPD4_1595
NC_017154.1	Protein Homology	CDS	2044175	2044579	.	+	0	ID=cds1834;Parent=gene1865;Dbxref=Genbank:WP_002211111.1;Name=WP_002211111.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=WP_002211111.1;transl_table=11
NC_017154.1	RefSeq	gene	2044594	2045271	.	+	.	ID=gene1866;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPD4_RS09370;old_locus_tag=YPD4_1596
NC_017154.1	Protein Homology	CDS	2044594	2045271	.	+	0	ID=cds1835;Parent=gene1866;Dbxref=Genbank:WP_002211112.1;Name=WP_002211112.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_002211112.1;transl_table=11
NC_017154.1	RefSeq	gene	2045473	2046759	.	+	.	ID=gene1867;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPD4_RS09375;old_locus_tag=YPD4_1597
NC_017154.1	Protein Homology	CDS	2045473	2046759	.	+	0	ID=cds1836;Parent=gene1867;Dbxref=Genbank:WP_002211113.1;Name=WP_002211113.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11
NC_017154.1	RefSeq	gene	2046781	2047410	.	+	.	ID=gene1868;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=YPD4_RS09380;old_locus_tag=YPD4_1598
NC_017154.1	Protein Homology	CDS	2046781	2047410	.	+	0	ID=cds1837;Parent=gene1868;Dbxref=Genbank:WP_002211114.1;Name=WP_002211114.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=WP_002211114.1;transl_table=11
NC_017154.1	RefSeq	gene	2047364	2048089	.	+	.	ID=gene1869;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=YPD4_RS09385;old_locus_tag=YPD4_1599;pseudo=true
NC_017154.1	Protein Homology	CDS	2047364	2048089	.	+	0	ID=cds1838;Parent=gene1869;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar biosynthesis protein FlgG;pseudo=true;transl_except=(pos:2047376..2047378%2Caa:Other);transl_table=11
NC_017154.1	RefSeq	gene	2048191	2048922	.	+	.	ID=gene1870;Name=YPD4_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09390;old_locus_tag=YPD4_1600
NC_017154.1	Protein Homology	CDS	2048191	2048922	.	+	0	ID=cds1839;Parent=gene1870;Dbxref=Genbank:WP_002220498.1;Name=WP_002220498.1;gbkey=CDS;product=flagellar basal body L-ring protein;protein_id=WP_002220498.1;transl_table=11
NC_017154.1	RefSeq	gene	2048937	2050046	.	+	.	ID=gene1871;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=YPD4_RS09395;old_locus_tag=YPD4_1601
NC_017154.1	Protein Homology	CDS	2048937	2050046	.	+	0	ID=cds1840;Parent=gene1871;Dbxref=Genbank:WP_002211117.1;Name=WP_002211117.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring protein;protein_id=WP_002211117.1;transl_table=11
NC_017154.1	RefSeq	gene	2050046	2050990	.	+	.	ID=gene1872;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPD4_RS09400;old_locus_tag=YPD4_1602
NC_017154.1	Protein Homology	CDS	2050046	2050990	.	+	0	ID=cds1841;Parent=gene1872;Dbxref=Genbank:WP_002211118.1;Name=WP_002211118.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein FlgJ;protein_id=WP_002211118.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2050999	2051836	.	+	.	ID=id154;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2052004	2053668	.	+	.	ID=gene1873;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPD4_RS09405;old_locus_tag=YPD4_1603
NC_017154.1	Protein Homology	CDS	2052004	2053668	.	+	0	ID=cds1842;Parent=gene1873;Dbxref=Genbank:WP_002211119.1;Name=WP_002211119.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211119.1;transl_table=11
NC_017154.1	RefSeq	gene	2053807	2054787	.	+	.	ID=gene1874;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPD4_RS09410;old_locus_tag=YPD4_1604
NC_017154.1	Protein Homology	CDS	2053807	2054787	.	+	0	ID=cds1843;Parent=gene1874;Dbxref=Genbank:WP_002211120.1;Name=WP_002211120.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11
NC_017154.1	RefSeq	gene	2054816	2055817	.	-	.	ID=gene1875;Name=YPD4_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09415;old_locus_tag=YPD4_1605
NC_017154.1	Protein Homology	CDS	2054816	2055817	.	-	0	ID=cds1844;Parent=gene1875;Dbxref=Genbank:WP_002211121.1;Name=WP_002211121.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211121.1;transl_table=11
NC_017154.1	RefSeq	gene	2056035	2058101	.	+	.	ID=gene1876;Name=YPD4_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09420;old_locus_tag=YPD4_1606
NC_017154.1	Protein Homology	CDS	2056035	2058101	.	+	0	ID=cds1845;Parent=gene1876;Dbxref=Genbank:WP_002211122.1;Name=WP_002211122.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002211122.1;transl_table=11
NC_017154.1	RefSeq	gene	2058231	2059310	.	+	.	ID=gene1877;Name=YPD4_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09425;old_locus_tag=YPD4_1607
NC_017154.1	Protein Homology	CDS	2058231	2059310	.	+	0	ID=cds1846;Parent=gene1877;Dbxref=Genbank:WP_002211124.1;Name=WP_002211124.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211124.1;transl_table=11
NC_017154.1	RefSeq	gene	2059353	2060348	.	+	.	ID=gene1878;Name=YPD4_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09430;old_locus_tag=YPD4_1608
NC_017154.1	Protein Homology	CDS	2059353	2060348	.	+	0	ID=cds1847;Parent=gene1878;Dbxref=Genbank:WP_002211125.1;Name=WP_002211125.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211125.1;transl_table=11
NC_017154.1	RefSeq	gene	2060414	2061991	.	+	.	ID=gene1879;Name=YPD4_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09435;old_locus_tag=YPD4_1609
NC_017154.1	Protein Homology	CDS	2060414	2061991	.	+	0	ID=cds1848;Parent=gene1879;Dbxref=Genbank:WP_002211126.1;Name=WP_002211126.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002211126.1;transl_table=11
NC_017154.1	RefSeq	gene	2061994	2063016	.	+	.	ID=gene1880;Name=YPD4_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09440;old_locus_tag=YPD4_1610
NC_017154.1	Protein Homology	CDS	2061994	2063016	.	+	0	ID=cds1849;Parent=gene1880;Dbxref=Genbank:WP_002214974.1;Name=WP_002214974.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002214974.1;transl_table=11
NC_017154.1	RefSeq	gene	2063065	2064024	.	+	.	ID=gene1881;Name=YPD4_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09445;old_locus_tag=YPD4_1611
NC_017154.1	Protein Homology	CDS	2063065	2064024	.	+	0	ID=cds1850;Parent=gene1881;Dbxref=Genbank:WP_002211128.1;Name=WP_002211128.1;gbkey=CDS;product=kinase pfkB family;protein_id=WP_002211128.1;transl_table=11
NC_017154.1	RefSeq	gene	2064282	2064701	.	-	.	ID=gene1882;Name=YPD4_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09450;old_locus_tag=YPD4_1612
NC_017154.1	Protein Homology	CDS	2064282	2064701	.	-	0	ID=cds1851;Parent=gene1882;Dbxref=Genbank:WP_002211129.1;Name=WP_002211129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211129.1;transl_table=11
NC_017154.1	RefSeq	gene	2064746	2064928	.	-	.	ID=gene1883;Name=YPD4_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09455
NC_017154.1	Protein Homology	CDS	2064746	2064928	.	-	0	ID=cds1852;Parent=gene1883;Dbxref=Genbank:WP_002214976.1;Name=WP_002214976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214976.1;transl_table=11
NC_017154.1	RefSeq	gene	2065135	2065917	.	-	.	ID=gene1884;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=YPD4_RS09460;old_locus_tag=YPD4_1613
NC_017154.1	Protein Homology	CDS	2065135	2065917	.	-	0	ID=cds1853;Parent=gene1884;Dbxref=Genbank:WP_002211130.1;Name=WP_002211130.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_002211130.1;transl_table=11
NC_017154.1	RefSeq	gene	2065920	2066189	.	-	.	ID=gene1885;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=YPD4_RS09465
NC_017154.1	Protein Homology	CDS	2065920	2066189	.	-	0	ID=cds1854;Parent=gene1885;Dbxref=Genbank:WP_002211131.1;Name=WP_002211131.1;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211131.1;transl_table=11
NC_017154.1	RefSeq	gene	2066295	2067035	.	-	.	ID=gene1886;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=YPD4_RS09470;old_locus_tag=YPD4_1614
NC_017154.1	Protein Homology	CDS	2066295	2067035	.	-	0	ID=cds1855;Parent=gene1886;Dbxref=Genbank:WP_002220494.1;Name=WP_002220494.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=WP_002220494.1;transl_table=11
NC_017154.1	RefSeq	gene	2067116	2067652	.	-	.	ID=gene1887;Name=YPD4_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09475;old_locus_tag=YPD4_1615
NC_017154.1	Protein Homology	CDS	2067116	2067652	.	-	0	ID=cds1856;Parent=gene1887;Dbxref=Genbank:WP_002211133.1;Name=WP_002211133.1;gbkey=CDS;product=flagellar biosynthesis protein;protein_id=WP_002211133.1;transl_table=11
NC_017154.1	RefSeq	gene	2067652	2068068	.	-	.	ID=gene1888;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=YPD4_RS09480;old_locus_tag=YPD4_1616
NC_017154.1	Protein Homology	CDS	2067652	2068068	.	-	0	ID=cds1857;Parent=gene1888;Dbxref=Genbank:WP_002211134.1;Name=WP_002211134.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_002211134.1;transl_table=11
NC_017154.1	RefSeq	gene	2068065	2069066	.	-	.	ID=gene1889;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=YPD4_RS09485;old_locus_tag=YPD4_1617
NC_017154.1	Protein Homology	CDS	2068065	2069066	.	-	0	ID=cds1858;Parent=gene1889;Dbxref=Genbank:WP_002211135.1;Name=WP_002211135.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_002211135.1;transl_table=11
NC_017154.1	RefSeq	gene	2069072	2069542	.	-	.	ID=gene1890;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=YPD4_RS09490;old_locus_tag=YPD4_1618
NC_017154.1	Protein Homology	CDS	2069072	2069542	.	-	0	ID=cds1859;Parent=gene1890;Dbxref=Genbank:WP_002227961.1;Name=WP_002227961.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body protein FliL;protein_id=WP_002227961.1;transl_table=11
NC_017154.1	RefSeq	gene	2069809	2071161	.	-	.	ID=gene1891;Name=YPD4_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09495;old_locus_tag=YPD4_1619
NC_017154.1	Protein Homology	CDS	2069809	2071161	.	-	0	ID=cds1860;Parent=gene1891;Dbxref=Genbank:WP_002211138.1;Name=WP_002211138.1;gbkey=CDS;product=flagellar hook-length control protein FliK;protein_id=WP_002211138.1;transl_table=11
NC_017154.1	RefSeq	gene	2071158	2071604	.	-	.	ID=gene1892;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=YPD4_RS09500;old_locus_tag=YPD4_1620
NC_017154.1	Protein Homology	CDS	2071158	2071604	.	-	0	ID=cds1861;Parent=gene1892;Dbxref=Genbank:WP_002211139.1;Name=WP_002211139.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;product=flagellar biosynthesis chaperone;protein_id=WP_002211139.1;transl_table=11
NC_017154.1	RefSeq	gene	2071704	2073159	.	-	.	ID=gene1893;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=pseudogene;locus_tag=YPD4_RS09505;pseudo=true
NC_017154.1	Protein Homology	CDS	2071704	2073159	.	-	0	ID=cds1862;Parent=gene1893;Note=involved in type III protein export during flagellum assembly;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=fliI;product=ATP synthase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2073122	2073838	.	-	.	ID=gene1894;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPD4_RS09510;old_locus_tag=YPD4_1623
NC_017154.1	Protein Homology	CDS	2073122	2073838	.	-	0	ID=cds1863;Parent=gene1894;Dbxref=Genbank:WP_002211141.1;Name=WP_002211141.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=WP_002211141.1;transl_table=11
NC_017154.1	RefSeq	gene	2073831	2074823	.	-	.	ID=gene1895;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPD4_RS09515;old_locus_tag=YPD4_1624
NC_017154.1	Protein Homology	CDS	2073831	2074823	.	-	0	ID=cds1864;Parent=gene1895;Dbxref=Genbank:WP_002211142.1;Name=WP_002211142.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11
NC_017154.1	RefSeq	gene	2074820	2076532	.	-	.	ID=gene1896;Name=YPD4_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09520;old_locus_tag=YPD4_1625
NC_017154.1	Protein Homology	CDS	2074820	2076532	.	-	0	ID=cds1865;Parent=gene1896;Dbxref=Genbank:WP_002211143.1;Name=WP_002211143.1;gbkey=CDS;product=flagellar M-ring protein FliF;protein_id=WP_002211143.1;transl_table=11
NC_017154.1	RefSeq	gene	2076885	2077196	.	+	.	ID=gene1897;Name=YPD4_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09525;old_locus_tag=YPD4_1626
NC_017154.1	Protein Homology	CDS	2076885	2077196	.	+	0	ID=cds1866;Parent=gene1897;Dbxref=Genbank:WP_002211144.1;Name=WP_002211144.1;gbkey=CDS;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211144.1;transl_table=11
NC_017154.1	RefSeq	gene	2077616	2077795	.	+	.	ID=gene1898;Name=YPD4_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09530
NC_017154.1	Protein Homology	CDS	2077616	2077795	.	+	0	ID=cds1867;Parent=gene1898;Dbxref=Genbank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11
NC_017154.1	RefSeq	gene	2077806	2078282	.	+	.	ID=gene1899;Name=YPD4_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09535
NC_017154.1	Protein Homology	CDS	2077806	2078282	.	+	0	ID=cds1868;Parent=gene1899;Dbxref=Genbank:WP_002215992.1;Name=WP_002215992.1;gbkey=CDS;product=death-on-curing family protein;protein_id=WP_002215992.1;transl_table=11
NC_017154.1	RefSeq	gene	2078468	2079079	.	-	.	ID=gene1900;Name=YPD4_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09540;old_locus_tag=YPD4_1627
NC_017154.1	Protein Homology	CDS	2078468	2079079	.	-	0	ID=cds1869;Parent=gene1900;Dbxref=Genbank:WP_002211145.1;Name=WP_002211145.1;gbkey=CDS;product=DNA-3-methyladenine glycosidase;protein_id=WP_002211145.1;transl_table=11
NC_017154.1	RefSeq	gene	2079240	2080145	.	-	.	ID=gene1901;Name=YPD4_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09545;old_locus_tag=YPD4_1628
NC_017154.1	Protein Homology	CDS	2079240	2080145	.	-	0	ID=cds1870;Parent=gene1901;Dbxref=Genbank:WP_002228542.1;Name=WP_002228542.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002228542.1;transl_table=11
NC_017154.1	RefSeq	gene	2080282	2082195	.	-	.	ID=gene1902;Name=YPD4_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09550;old_locus_tag=YPD4_1629
NC_017154.1	Protein Homology	CDS	2080282	2082195	.	-	0	ID=cds1871;Parent=gene1902;Dbxref=Genbank:WP_002229284.1;Name=WP_002229284.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002229284.1;transl_table=11
NC_017154.1	RefSeq	gene	2082549	2083424	.	-	.	ID=gene1903;Name=YPD4_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09555;old_locus_tag=YPD4_1630
NC_017154.1	Protein Homology	CDS	2082549	2083424	.	-	0	ID=cds1872;Parent=gene1903;Dbxref=Genbank:WP_002211147.1;Name=WP_002211147.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211147.1;transl_table=11
NC_017154.1	RefSeq	gene	2083431	2083670	.	-	.	ID=gene1904;Name=YPD4_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09560
NC_017154.1	Protein Homology	CDS	2083431	2083670	.	-	0	ID=cds1873;Parent=gene1904;Dbxref=Genbank:WP_002215994.1;Name=WP_002215994.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215994.1;transl_table=11
NC_017154.1	RefSeq	gene	2083725	2084087	.	-	.	ID=gene1905;Name=YPD4_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09565
NC_017154.1	Protein Homology	CDS	2083725	2084087	.	-	0	ID=cds1874;Parent=gene1905;Dbxref=Genbank:WP_002211148.1;Name=WP_002211148.1;gbkey=CDS;product=flagellar protein FliT;protein_id=WP_002211148.1;transl_table=11
NC_017154.1	RefSeq	gene	2084098	2084496	.	-	.	ID=gene1906;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YPD4_RS09570;old_locus_tag=YPD4_1631
NC_017154.1	Protein Homology	CDS	2084098	2084496	.	-	0	ID=cds1875;Parent=gene1906;Dbxref=Genbank:WP_002211149.1;Name=WP_002211149.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar export chaperone FliS;protein_id=WP_002211149.1;transl_table=11
NC_017154.1	RefSeq	gene	2084507	2085907	.	-	.	ID=gene1907;Name=YPD4_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09575;old_locus_tag=YPD4_1632
NC_017154.1	Protein Homology	CDS	2084507	2085907	.	-	0	ID=cds1876;Parent=gene1907;Dbxref=Genbank:WP_002211150.1;Name=WP_002211150.1;gbkey=CDS;product=flagellar cap protein FliD;protein_id=WP_002211150.1;transl_table=11
NC_017154.1	RefSeq	gene	2086204	2087313	.	+	.	ID=gene1908;Name=YPD4_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09580;old_locus_tag=YPD4_1633
NC_017154.1	Protein Homology	CDS	2086204	2087313	.	+	0	ID=cds1877;Parent=gene1908;Dbxref=Genbank:WP_002211152.1;Name=WP_002211152.1;Note=structural flagella protein;gbkey=CDS;product=flagellin;protein_id=WP_002211152.1;transl_table=11
NC_017154.1	RefSeq	gene	2087660	2088382	.	+	.	ID=gene1909;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=YPD4_RS09585;old_locus_tag=YPD4_1634
NC_017154.1	Protein Homology	CDS	2087660	2088382	.	+	0	ID=cds1878;Parent=gene1909;Dbxref=Genbank:WP_002211153.1;Name=WP_002211153.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=WP_002211153.1;transl_table=11
NC_017154.1	RefSeq	gene	2088604	2089113	.	+	.	ID=gene1910;Name=YPD4_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09590;old_locus_tag=YPD4_1635
NC_017154.1	Protein Homology	CDS	2088604	2089113	.	+	0	ID=cds1879;Parent=gene1910;Dbxref=Genbank:WP_002211154.1;Name=WP_002211154.1;gbkey=CDS;product=flagellar biosynthesis protein FliZ;protein_id=WP_002211154.1;transl_table=11
NC_017154.1	RefSeq	gene	2089402	2090394	.	+	.	ID=gene1911;Name=YPD4_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09595;old_locus_tag=YPD4_1636
NC_017154.1	Protein Homology	CDS	2089402	2090394	.	+	0	ID=cds1880;Parent=gene1911;Dbxref=Genbank:WP_002227959.1;Name=WP_002227959.1;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=WP_002227959.1;transl_table=11
NC_017154.1	RefSeq	gene	2090518	2091318	.	+	.	ID=gene1912;Name=YPD4_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09600;old_locus_tag=YPD4_1637
NC_017154.1	Protein Homology	CDS	2090518	2091318	.	+	0	ID=cds1881;Parent=gene1912;Dbxref=Genbank:WP_002211157.1;Name=WP_002211157.1;gbkey=CDS;product=cystine transporter subunit;protein_id=WP_002211157.1;transl_table=11
NC_017154.1	RefSeq	gene	2091318	2091980	.	+	.	ID=gene1913;Name=YPD4_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09605;old_locus_tag=YPD4_1638
NC_017154.1	Protein Homology	CDS	2091318	2091980	.	+	0	ID=cds1882;Parent=gene1913;Dbxref=Genbank:WP_002211158.1;Name=WP_002211158.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002211158.1;transl_table=11
NC_017154.1	RefSeq	gene	2091983	2092744	.	+	.	ID=gene1914;Name=YPD4_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09610;old_locus_tag=YPD4_1639
NC_017154.1	Protein Homology	CDS	2091983	2092744	.	+	0	ID=cds1883;Parent=gene1914;Dbxref=Genbank:WP_002211159.1;Name=WP_002211159.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211159.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2092732	2092900	.	+	.	ID=id155;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2093036	2093374	.	-	.	ID=gene1915;Name=YPD4_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09615;old_locus_tag=YPD4_1640
NC_017154.1	Protein Homology	CDS	2093036	2093374	.	-	0	ID=cds1884;Parent=gene1915;Dbxref=Genbank:WP_002216048.1;Name=WP_002216048.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216048.1;transl_table=11
NC_017154.1	RefSeq	gene	2093408	2093701	.	-	.	ID=gene1916;Name=YPD4_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09620
NC_017154.1	Protein Homology	CDS	2093408	2093701	.	-	0	ID=cds1885;Parent=gene1916;Dbxref=Genbank:WP_002211161.1;Name=WP_002211161.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211161.1;transl_table=11
NC_017154.1	RefSeq	gene	2094206	2098177	.	-	.	ID=gene1917;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=YPD4_RS09625;old_locus_tag=YPD4_1641
NC_017154.1	Protein Homology	CDS	2094206	2098177	.	-	0	ID=cds1886;Parent=gene1917;Dbxref=Genbank:WP_002211162.1;Name=WP_002211162.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=WP_002211162.1;transl_table=11
NC_017154.1	RefSeq	gene	2098522	2098719	.	+	.	ID=gene1918;Name=YPD4_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09630
NC_017154.1	Protein Homology	CDS	2098522	2098719	.	+	0	ID=cds1887;Parent=gene1918;Dbxref=Genbank:WP_002211163.1;Name=WP_002211163.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211163.1;transl_table=11
NC_017154.1	RefSeq	gene	2098749	2100233	.	+	.	ID=gene1919;Name=YPD4_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09635;old_locus_tag=YPD4_1642
NC_017154.1	Protein Homology	CDS	2098749	2100233	.	+	0	ID=cds1888;Parent=gene1919;Dbxref=Genbank:WP_002211164.1;Name=WP_002211164.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;product=proline:sodium symporter;protein_id=WP_002211164.1;transl_table=11
NC_017154.1	RefSeq	gene	2100566	2101414	.	+	.	ID=gene1920;Name=YPD4_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09640;old_locus_tag=YPD4_1643
NC_017154.1	Protein Homology	CDS	2100566	2101414	.	+	0	ID=cds1889;Parent=gene1920;Dbxref=Genbank:WP_002211165.1;Name=WP_002211165.1;gbkey=CDS;product=ferrous iron permease EfeU;protein_id=WP_002211165.1;transl_table=11
NC_017154.1	RefSeq	gene	2101444	2102574	.	+	.	ID=gene1921;Name=YPD4_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09645;old_locus_tag=YPD4_1644
NC_017154.1	Protein Homology	CDS	2101444	2102574	.	+	0	ID=cds1890;Parent=gene1921;Dbxref=Genbank:WP_002211166.1;Name=WP_002211166.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;product=iron uptake system component EfeO;protein_id=WP_002211166.1;transl_table=11
NC_017154.1	RefSeq	gene	2102585	2103889	.	+	.	ID=gene1922;Name=YPD4_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09650;old_locus_tag=YPD4_1645
NC_017154.1	Protein Homology	CDS	2102585	2103889	.	+	0	ID=cds1891;Parent=gene1922;Dbxref=Genbank:WP_002211167.1;Name=WP_002211167.1;gbkey=CDS;product=deferrochelatase/peroxidase EfeB;protein_id=WP_002211167.1;transl_table=11
NC_017154.1	RefSeq	gene	2103975	2104574	.	-	.	ID=gene1923;Name=YPD4_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09655;old_locus_tag=YPD4_1646
NC_017154.1	Protein Homology	CDS	2103975	2104574	.	-	0	ID=cds1892;Parent=gene1923;Dbxref=Genbank:WP_002211168.1;Name=WP_002211168.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=WP_002211168.1;transl_table=11
NC_017154.1	RefSeq	gene	2104968	2106146	.	+	.	ID=gene1924;Name=YPD4_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09660;old_locus_tag=YPD4_1647
NC_017154.1	Protein Homology	CDS	2104968	2106146	.	+	0	ID=cds1893;Parent=gene1924;Dbxref=Genbank:WP_002211169.1;Name=WP_002211169.1;gbkey=CDS;product=N-acetylneuraminate epimerase;protein_id=WP_002211169.1;transl_table=11
NC_017154.1	RefSeq	gene	2106272	2107696	.	-	.	ID=gene1925;Name=YPD4_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09665;old_locus_tag=YPD4_1648
NC_017154.1	Protein Homology	CDS	2106272	2107696	.	-	0	ID=cds1894;Parent=gene1925;Dbxref=Genbank:WP_002220481.1;Name=WP_002220481.1;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220481.1;transl_table=11
NC_017154.1	RefSeq	gene	2108049	2108124	.	+	.	ID=gene1926;Name=YPD4_RS09670;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS09670;old_locus_tag=YPD4_t24
NC_017154.1	tRNAscan-SE	tRNA	2108049	2108124	.	+	.	ID=rna29;Parent=gene1926;anticodon=(pos:2108082..2108084);gbkey=tRNA;product=tRNA-Lys
NC_017154.1	tRNAscan-SE	exon	2108049	2108124	.	+	.	ID=id156;Parent=rna29;anticodon=(pos:2108082..2108084);gbkey=tRNA;product=tRNA-Lys
NC_017154.1	RefSeq	gene	2108811	2109362	.	+	.	ID=gene1927;Name=YPD4_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09675;old_locus_tag=YPD4_1649
NC_017154.1	Protein Homology	CDS	2108811	2109362	.	+	0	ID=cds1895;Parent=gene1927;Dbxref=Genbank:WP_002211172.1;Name=WP_002211172.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002211172.1;transl_table=11
NC_017154.1	RefSeq	gene	2109401	2109583	.	-	.	ID=gene1928;Name=YPD4_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09680
NC_017154.1	Protein Homology	CDS	2109401	2109583	.	-	0	ID=cds1896;Parent=gene1928;Dbxref=Genbank:WP_002218407.1;Name=WP_002218407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218407.1;transl_table=11
NC_017154.1	RefSeq	gene	2109702	2109956	.	+	.	ID=gene1929;Name=YPD4_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09685
NC_017154.1	Protein Homology	CDS	2109702	2109956	.	+	0	ID=cds1897;Parent=gene1929;Dbxref=Genbank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211173.1;transl_table=11
NC_017154.1	RefSeq	gene	2109984	2110325	.	-	.	ID=gene1930;Name=YPD4_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09690;old_locus_tag=YPD4_1650
NC_017154.1	Protein Homology	CDS	2109984	2110325	.	-	0	ID=cds1898;Parent=gene1930;Dbxref=Genbank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;product=membrane protein;protein_id=WP_002218408.1;transl_table=11
NC_017154.1	RefSeq	gene	2110453	2110677	.	-	.	ID=gene1931;Name=YPD4_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09695
NC_017154.1	Protein Homology	CDS	2110453	2110677	.	-	0	ID=cds1899;Parent=gene1931;Dbxref=Genbank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211175.1;transl_table=11
NC_017154.1	RefSeq	gene	2111340	2111996	.	+	.	ID=gene1932;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;gene_synonym=uvrY;locus_tag=YPD4_RS09700;old_locus_tag=YPD4_1651
NC_017154.1	Protein Homology	CDS	2111340	2111996	.	+	0	ID=cds1900;Parent=gene1932;Dbxref=Genbank:WP_002211176.1;Name=WP_002211176.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=sirA;product=transcriptional regulator;protein_id=WP_002211176.1;transl_table=11
NC_017154.1	RefSeq	gene	2111989	2113821	.	+	.	ID=gene1933;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=YPD4_RS09705;old_locus_tag=YPD4_1652
NC_017154.1	Protein Homology	CDS	2111989	2113821	.	+	0	ID=cds1901;Parent=gene1933;Dbxref=Genbank:WP_002220477.1;Name=WP_002220477.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=UvrABC system protein C;protein_id=WP_002220477.1;transl_table=11
NC_017154.1	RefSeq	gene	2113880	2114428	.	+	.	ID=gene1934;Name=YPD4_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09710;old_locus_tag=YPD4_1653
NC_017154.1	Protein Homology	CDS	2113880	2114428	.	+	0	ID=cds1902;Parent=gene1934;Dbxref=Genbank:WP_002220475.1;Name=WP_002220475.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002220475.1;transl_table=11
NC_017154.1	RefSeq	gene	2114573	2114648	.	+	.	ID=gene1935;Name=YPD4_RS09715;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS09715;old_locus_tag=YPD4_t25
NC_017154.1	tRNAscan-SE	tRNA	2114573	2114648	.	+	.	ID=rna30;Parent=gene1935;anticodon=(pos:2114606..2114608);gbkey=tRNA;product=tRNA-Gly
NC_017154.1	tRNAscan-SE	exon	2114573	2114648	.	+	.	ID=id157;Parent=rna30;anticodon=(pos:2114606..2114608);gbkey=tRNA;product=tRNA-Gly
NC_017154.1	RefSeq	gene	2114701	2114774	.	+	.	ID=gene1936;Name=YPD4_RS09720;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS09720;old_locus_tag=YPD4_t26
NC_017154.1	tRNAscan-SE	tRNA	2114701	2114774	.	+	.	ID=rna31;Parent=gene1936;anticodon=(pos:2114733..2114735);gbkey=tRNA;product=tRNA-Cys
NC_017154.1	tRNAscan-SE	exon	2114701	2114774	.	+	.	ID=id158;Parent=rna31;anticodon=(pos:2114733..2114735);gbkey=tRNA;product=tRNA-Cys
NC_017154.1	RefSeq	gene	2114785	2114870	.	+	.	ID=gene1937;Name=YPD4_RS09725;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS09725;old_locus_tag=YPD4_t27
NC_017154.1	tRNAscan-SE	tRNA	2114785	2114870	.	+	.	ID=rna32;Parent=gene1937;anticodon=(pos:2114819..2114821);gbkey=tRNA;product=tRNA-Leu
NC_017154.1	tRNAscan-SE	exon	2114785	2114870	.	+	.	ID=id159;Parent=rna32;anticodon=(pos:2114819..2114821);gbkey=tRNA;product=tRNA-Leu
NC_017154.1	RefSeq	gene	2115168	2115683	.	-	.	ID=gene1938;Name=YPD4_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09730
NC_017154.1	Protein Homology	CDS	2115168	2115683	.	-	0	ID=cds1903;Parent=gene1938;Dbxref=Genbank:WP_002215399.1;Name=WP_002215399.1;gbkey=CDS;product=integrase;protein_id=WP_002215399.1;transl_table=11
NC_017154.1	RefSeq	gene	2115794	2116021	.	+	.	ID=gene1939;Name=YPD4_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09735
NC_017154.1	Protein Homology	CDS	2115794	2116021	.	+	0	ID=cds1904;Parent=gene1939;Dbxref=Genbank:WP_002215401.1;Name=WP_002215401.1;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002215401.1;transl_table=11
NC_017154.1	RefSeq	gene	2116414	2116536	.	+	.	ID=gene1940;Name=YPD4_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09740
NC_017154.1	Protein Homology	CDS	2116414	2116536	.	+	0	ID=cds1905;Parent=gene1940;Dbxref=Genbank:WP_002213228.1;Name=WP_002213228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213228.1;transl_table=11
NC_017154.1	RefSeq	gene	2117146	2117328	.	+	.	ID=gene1941;Name=YPD4_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09745
NC_017154.1	Protein Homology	CDS	2117146	2117328	.	+	0	ID=cds1906;Parent=gene1941;Dbxref=Genbank:WP_002213223.1;Name=WP_002213223.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213223.1;transl_table=11
NC_017154.1	RefSeq	gene	2117358	2117546	.	-	.	ID=gene1942;Name=YPD4_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09750
NC_017154.1	Protein Homology	CDS	2117358	2117546	.	-	0	ID=cds1907;Parent=gene1942;Dbxref=Genbank:WP_002223864.1;Name=WP_002223864.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223864.1;transl_table=11
NC_017154.1	RefSeq	gene	2117572	2117916	.	-	.	ID=gene1943;Name=YPD4_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09755;old_locus_tag=YPD4_1654
NC_017154.1	Protein Homology	CDS	2117572	2117916	.	-	0	ID=cds1908;Parent=gene1943;Dbxref=Genbank:WP_002215406.1;Name=WP_002215406.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215406.1;transl_table=11
NC_017154.1	RefSeq	gene	2118136	2119095	.	-	.	ID=gene1944;Name=YPD4_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09760;old_locus_tag=YPD4_1655
NC_017154.1	Protein Homology	CDS	2118136	2119095	.	-	0	ID=cds1909;Parent=gene1944;Dbxref=Genbank:WP_002213218.1;Name=WP_002213218.1;gbkey=CDS;product=transposase;protein_id=WP_002213218.1;transl_table=11
NC_017154.1	RefSeq	gene	2119167	2119649	.	-	.	ID=gene1945;Name=YPD4_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09765;old_locus_tag=YPD4_1656
NC_017154.1	Protein Homology	CDS	2119167	2119649	.	-	0	ID=cds1910;Parent=gene1945;Dbxref=Genbank:WP_032465626.1;Name=WP_032465626.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_032465626.1;transl_table=11
NC_017154.1	RefSeq	gene	2119697	2119837	.	-	.	ID=gene1946;Name=YPD4_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09770
NC_017154.1	Protein Homology	CDS	2119697	2119837	.	-	0	ID=cds1911;Parent=gene1946;Dbxref=Genbank:WP_002213214.1;Name=WP_002213214.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213214.1;transl_table=11
NC_017154.1	RefSeq	gene	2120002	2120280	.	-	.	ID=gene1947;Name=YPD4_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09775
NC_017154.1	Protein Homology	CDS	2120002	2120280	.	-	0	ID=cds1912;Parent=gene1947;Dbxref=Genbank:WP_002215410.1;Name=WP_002215410.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215410.1;transl_table=11
NC_017154.1	RefSeq	gene	2120261	2120566	.	-	.	ID=gene1948;Name=YPD4_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09780;old_locus_tag=YPD4_1657
NC_017154.1	Protein Homology	CDS	2120261	2120566	.	-	0	ID=cds1913;Parent=gene1948;Dbxref=Genbank:WP_002215411.1;Name=WP_002215411.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215411.1;transl_table=11
NC_017154.1	RefSeq	gene	2120563	2120778	.	-	.	ID=gene1949;Name=YPD4_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09785
NC_017154.1	Protein Homology	CDS	2120563	2120778	.	-	0	ID=cds1914;Parent=gene1949;Dbxref=Genbank:WP_002215412.1;Name=WP_002215412.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215412.1;transl_table=11
NC_017154.1	RefSeq	gene	2121213	2121500	.	-	.	ID=gene1950;Name=YPD4_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09790
NC_017154.1	Protein Homology	CDS	2121213	2121500	.	-	0	ID=cds1915;Parent=gene1950;Dbxref=Genbank:WP_002215413.1;Name=WP_002215413.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215413.1;transl_table=11
NC_017154.1	RefSeq	gene	2121517	2121816	.	-	.	ID=gene1951;Name=YPD4_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09795
NC_017154.1	Protein Homology	CDS	2121517	2121816	.	-	0	ID=cds1916;Parent=gene1951;Dbxref=Genbank:WP_002213212.1;Name=WP_002213212.1;gbkey=CDS;product=lysozyme;protein_id=WP_002213212.1;transl_table=11
NC_017154.1	RefSeq	gene	2121813	2122067	.	-	.	ID=gene1952;Name=YPD4_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09800
NC_017154.1	Protein Homology	CDS	2121813	2122067	.	-	0	ID=cds1917;Parent=gene1952;Dbxref=Genbank:WP_002213211.1;Name=WP_002213211.1;gbkey=CDS;product=phage baseplate protein;protein_id=WP_002213211.1;transl_table=11
NC_017154.1	RefSeq	gene	2122203	2122475	.	+	.	ID=gene1953;Name=YPD4_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09805
NC_017154.1	Protein Homology	CDS	2122203	2122475	.	+	0	ID=cds1918;Parent=gene1953;Dbxref=Genbank:WP_002213210.1;Name=WP_002213210.1;gbkey=CDS;product=toxin;protein_id=WP_002213210.1;transl_table=11
NC_017154.1	RefSeq	gene	2122456	2122746	.	+	.	ID=gene1954;Name=YPD4_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09810
NC_017154.1	Protein Homology	CDS	2122456	2122746	.	+	0	ID=cds1919;Parent=gene1954;Dbxref=Genbank:WP_002213209.1;Name=WP_002213209.1;gbkey=CDS;product=antitoxin;protein_id=WP_002213209.1;transl_table=11
NC_017154.1	RefSeq	gene	2122812	2123888	.	+	.	ID=gene1955;Name=YPD4_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09815;old_locus_tag=YPD4_1658
NC_017154.1	Protein Homology	CDS	2122812	2123888	.	+	0	ID=cds1920;Parent=gene1955;Dbxref=Genbank:WP_002213208.1;Name=WP_002213208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213208.1;transl_table=11
NC_017154.1	RefSeq	gene	2123936	2125134	.	+	.	ID=gene1956;Name=YPD4_RS09820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS09820;pseudo=true
NC_017154.1	Protein Homology	CDS	2123936	2125134	.	+	0	ID=cds1921;Parent=gene1956;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2125552	2126121	.	-	.	ID=gene1957;Name=YPD4_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09825;old_locus_tag=YPD4_1661
NC_017154.1	Protein Homology	CDS	2125552	2126121	.	-	0	ID=cds1922;Parent=gene1957;Dbxref=Genbank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11
NC_017154.1	RefSeq	gene	2126133	2126567	.	-	.	ID=gene1958;Name=YPD4_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09830
NC_017154.1	Protein Homology	CDS	2126133	2126567	.	-	0	ID=cds1923;Parent=gene1958;Dbxref=Genbank:WP_002215417.1;Name=WP_002215417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215417.1;transl_table=11
NC_017154.1	RefSeq	gene	2127245	2127349	.	+	.	ID=gene1959;Name=YPD4_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09835
NC_017154.1	Protein Homology	CDS	2127245	2127349	.	+	0	ID=cds1924;Parent=gene1959;Dbxref=Genbank:WP_002215419.1;Name=WP_002215419.1;gbkey=CDS;product=transposase;protein_id=WP_002215419.1;transl_table=11
NC_017154.1	RefSeq	gene	2127536	2128333	.	+	.	ID=gene1960;Name=YPD4_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09840;old_locus_tag=YPD4_1663
NC_017154.1	Protein Homology	CDS	2127536	2128333	.	+	0	ID=cds1925;Parent=gene1960;Dbxref=Genbank:WP_002213201.1;Name=WP_002213201.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002213201.1;transl_table=11
NC_017154.1	RefSeq	gene	2128303	2128593	.	-	.	ID=gene1961;Name=YPD4_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09845
NC_017154.1	Protein Homology	CDS	2128303	2128593	.	-	0	ID=cds1926;Parent=gene1961;Dbxref=Genbank:WP_002215421.1;Name=WP_002215421.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215421.1;transl_table=11
NC_017154.1	RefSeq	gene	2129001	2130014	.	+	.	ID=gene1962;Name=YPD4_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09850;old_locus_tag=YPD4_1664
NC_017154.1	Protein Homology	CDS	2129001	2130014	.	+	0	ID=cds1927;Parent=gene1962;Dbxref=Genbank:WP_002213192.1;Name=WP_002213192.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002213192.1;transl_table=11
NC_017154.1	RefSeq	gene	2130044	2131312	.	+	.	ID=gene1963;Name=YPD4_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09855;old_locus_tag=YPD4_1665
NC_017154.1	Protein Homology	CDS	2130044	2131312	.	+	0	ID=cds1928;Parent=gene1963;Dbxref=Genbank:WP_002213190.1;Name=WP_002213190.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002213190.1;transl_table=11
NC_017154.1	RefSeq	gene	2131379	2132239	.	+	.	ID=gene1964;Name=YPD4_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09860;old_locus_tag=YPD4_1666
NC_017154.1	Protein Homology	CDS	2131379	2132239	.	+	0	ID=cds1929;Parent=gene1964;Dbxref=Genbank:WP_002213188.1;Name=WP_002213188.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213188.1;transl_table=11
NC_017154.1	RefSeq	gene	2132232	2133059	.	+	.	ID=gene1965;Name=YPD4_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09865;old_locus_tag=YPD4_1667
NC_017154.1	Protein Homology	CDS	2132232	2133059	.	+	0	ID=cds1930;Parent=gene1965;Dbxref=Genbank:WP_002213186.1;Name=WP_002213186.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213186.1;transl_table=11
NC_017154.1	RefSeq	gene	2133084	2133974	.	+	.	ID=gene1966;Name=YPD4_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09870;old_locus_tag=YPD4_1668
NC_017154.1	Protein Homology	CDS	2133084	2133974	.	+	0	ID=cds1931;Parent=gene1966;Dbxref=Genbank:WP_002215425.1;Name=WP_002215425.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002215425.1;transl_table=11
NC_017154.1	RefSeq	gene	2134049	2134200	.	+	.	ID=gene1967;Name=YPD4_RS09875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS09875;pseudo=true
NC_017154.1	Protein Homology	CDS	2134049	2134200	.	+	0	ID=cds1932;Parent=gene1967;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter ATPase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2134210	2134434	.	-	.	ID=gene1968;Name=YPD4_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09880
NC_017154.1	Protein Homology	CDS	2134210	2134434	.	-	0	ID=cds1933;Parent=gene1968;Dbxref=Genbank:WP_002213183.1;Name=WP_002213183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213183.1;transl_table=11
NC_017154.1	RefSeq	gene	2134450	2134635	.	-	.	ID=gene1969;Name=YPD4_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09885
NC_017154.1	Protein Homology	CDS	2134450	2134635	.	-	0	ID=cds1934;Parent=gene1969;Dbxref=Genbank:WP_002215428.1;Name=WP_002215428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215428.1;transl_table=11
NC_017154.1	RefSeq	gene	2134723	2134845	.	+	.	ID=gene1970;Name=YPD4_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09890
NC_017154.1	Protein Homology	CDS	2134723	2134845	.	+	0	ID=cds1935;Parent=gene1970;Dbxref=Genbank:WP_002213181.1;Name=WP_002213181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213181.1;transl_table=11
NC_017154.1	RefSeq	gene	2134829	2135056	.	-	.	ID=gene1971;Name=YPD4_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09895
NC_017154.1	Protein Homology	CDS	2134829	2135056	.	-	0	ID=cds1936;Parent=gene1971;Dbxref=Genbank:WP_002215429.1;Name=WP_002215429.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215429.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2135024	2136982	.	+	.	ID=id160;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2135113	2136135	.	+	.	ID=gene1972;Name=YPD4_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09900;old_locus_tag=YPD4_1669
NC_017154.1	Protein Homology	CDS	2135113	2136135	.	+	0	ID=cds1937;Parent=gene1972;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	2136135	2136914	.	+	.	ID=gene1973;Name=YPD4_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09905;old_locus_tag=YPD4_1670
NC_017154.1	Protein Homology	CDS	2136135	2136914	.	+	0	ID=cds1938;Parent=gene1973;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	2136958	2137071	.	-	.	ID=gene1974;Name=YPD4_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09910
NC_017154.1	Protein Homology	CDS	2136958	2137071	.	-	0	ID=cds1939;Parent=gene1974;Dbxref=Genbank:WP_002212894.1;Name=WP_002212894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212894.1;transl_table=11
NC_017154.1	RefSeq	gene	2137513	2138094	.	-	.	ID=gene1975;Name=YPD4_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09920;old_locus_tag=YPD4_1671
NC_017154.1	Protein Homology	CDS	2137513	2138094	.	-	0	ID=cds1940;Parent=gene1975;Dbxref=Genbank:WP_000937857.1;Name=WP_000937857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000937857.1;transl_table=11
NC_017154.1	RefSeq	gene	2138100	2138261	.	-	.	ID=gene1976;Name=YPD4_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09925
NC_017154.1	Protein Homology	CDS	2138100	2138261	.	-	0	ID=cds1941;Parent=gene1976;Dbxref=Genbank:WP_002214391.1;Name=WP_002214391.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214391.1;transl_table=11
NC_017154.1	RefSeq	gene	2138283	2138468	.	-	.	ID=gene1977;Name=YPD4_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09930
NC_017154.1	Protein Homology	CDS	2138283	2138468	.	-	0	ID=cds1942;Parent=gene1977;Dbxref=Genbank:WP_000205185.1;Name=WP_000205185.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_000205185.1;transl_table=11
NC_017154.1	RefSeq	gene	2138608	2139042	.	-	.	ID=gene1978;Name=YPD4_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09935;old_locus_tag=YPD4_1672
NC_017154.1	Protein Homology	CDS	2138608	2139042	.	-	0	ID=cds1943;Parent=gene1978;Dbxref=Genbank:WP_002212886.1;Name=WP_002212886.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212886.1;transl_table=11
NC_017154.1	RefSeq	gene	2139185	2139535	.	-	.	ID=gene1979;Name=YPD4_RS09940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS09940;partial=true;pseudo=true;start_range=.,2139185
NC_017154.1	Protein Homology	CDS	2139185	2139535	.	-	0	ID=cds1944;Parent=gene1979;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2139185;transl_table=11
NC_017154.1	RefSeq	gene	2140408	2142429	.	-	.	ID=gene1980;Name=YPD4_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09945;old_locus_tag=YPD4_1673
NC_017154.1	Protein Homology	CDS	2140408	2142429	.	-	0	ID=cds1945;Parent=gene1980;Dbxref=Genbank:WP_002212885.1;Name=WP_002212885.1;gbkey=CDS;product=pesticin receptor;protein_id=WP_002212885.1;transl_table=11
NC_017154.1	RefSeq	gene	2142560	2144137	.	-	.	ID=gene1981;Name=YPD4_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09950;old_locus_tag=YPD4_1674
NC_017154.1	Protein Homology	CDS	2142560	2144137	.	-	0	ID=cds1946;Parent=gene1981;Dbxref=Genbank:WP_001088826.1;Name=WP_001088826.1;gbkey=CDS;product=salicyl-AMP ligase;protein_id=WP_001088826.1;transl_table=11
NC_017154.1	RefSeq	gene	2144141	2144944	.	-	.	ID=gene1982;Name=YPD4_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09955;old_locus_tag=YPD4_1675
NC_017154.1	Protein Homology	CDS	2144141	2144944	.	-	0	ID=cds1947;Parent=gene1982;Dbxref=Genbank:WP_002212799.1;Name=WP_002212799.1;gbkey=CDS;product=thioesterase;protein_id=WP_002212799.1;transl_table=11
NC_017154.1	RefSeq	gene	2144941	2146041	.	-	.	ID=gene1983;Name=YPD4_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09960;old_locus_tag=YPD4_1676
NC_017154.1	Protein Homology	CDS	2144941	2146041	.	-	0	ID=cds1948;Parent=gene1983;Dbxref=Genbank:WP_000982866.1;Name=WP_000982866.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_000982866.1;transl_table=11
NC_017154.1	RefSeq	gene	2146038	2155529	.	-	.	ID=gene1984;Name=YPD4_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09965;old_locus_tag=YPD4_1677
NC_017154.1	Protein Homology	CDS	2146038	2155529	.	-	0	ID=cds1949;Parent=gene1984;Dbxref=Genbank:WP_002212777.1;Name=WP_002212777.1;gbkey=CDS;product=polyketide synthase;protein_id=WP_002212777.1;transl_table=11
NC_017154.1	RefSeq	gene	2155617	2161724	.	-	.	ID=gene1985;Name=YPD4_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09970;old_locus_tag=YPD4_1678
NC_017154.1	Protein Homology	CDS	2155617	2161724	.	-	0	ID=cds1950;Parent=gene1985;Dbxref=Genbank:WP_002212775.1;Name=WP_002212775.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_002212775.1;transl_table=11
NC_017154.1	RefSeq	gene	2161915	2162874	.	-	.	ID=gene1986;Name=YPD4_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09975;old_locus_tag=YPD4_1679
NC_017154.1	Protein Homology	CDS	2161915	2162874	.	-	0	ID=cds1951;Parent=gene1986;Dbxref=Genbank:WP_000140406.1;Name=WP_000140406.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_000140406.1;transl_table=11
NC_017154.1	RefSeq	gene	2163131	2164843	.	+	.	ID=gene1987;Name=YPD4_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09980;old_locus_tag=YPD4_1680
NC_017154.1	Protein Homology	CDS	2163131	2164843	.	+	0	ID=cds1952;Parent=gene1987;Dbxref=Genbank:WP_002214412.1;Name=WP_002214412.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002214412.1;transl_table=11
NC_017154.1	RefSeq	gene	2164830	2166632	.	+	.	ID=gene1988;Name=YPD4_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09985;old_locus_tag=YPD4_1681
NC_017154.1	Protein Homology	CDS	2164830	2166632	.	+	0	ID=cds1953;Parent=gene1988;Dbxref=Genbank:WP_002212761.1;Name=WP_002212761.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212761.1;transl_table=11
NC_017154.1	RefSeq	gene	2166625	2167905	.	+	.	ID=gene1989;Name=YPD4_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09990;old_locus_tag=YPD4_1682
NC_017154.1	Protein Homology	CDS	2166625	2167905	.	+	0	ID=cds1954;Parent=gene1989;Dbxref=Genbank:WP_001286280.1;Name=WP_001286280.1;gbkey=CDS;product=signal transducer;protein_id=WP_001286280.1;transl_table=11
NC_017154.1	RefSeq	gene	2167933	2169237	.	+	.	ID=gene1990;Name=YPD4_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS09995;old_locus_tag=YPD4_1683
NC_017154.1	Protein Homology	CDS	2167933	2169237	.	+	0	ID=cds1955;Parent=gene1990;Dbxref=Genbank:WP_000703040.1;Name=WP_000703040.1;Note=catalyzes the conversion of chorismate to salicylate in the biosynthesis of the siderophore yersiniabactin;gbkey=CDS;product=salicylate synthase;protein_id=WP_000703040.1;transl_table=11
NC_017154.1	RefSeq	gene	2169431	2170693	.	-	.	ID=gene1991;Name=YPD4_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10000;old_locus_tag=YPD4_1684
NC_017154.1	Protein Homology	CDS	2169431	2170693	.	-	0	ID=cds1956;Parent=gene1991;Dbxref=Genbank:WP_002212753.1;Name=WP_002212753.1;gbkey=CDS;product=integrase;protein_id=WP_002212753.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2170854	2170960	.	+	.	ID=id161;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2170855	2170930	.	-	.	ID=gene1992;Name=YPD4_RS10005;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS10005;old_locus_tag=YPD4_t28
NC_017154.1	tRNAscan-SE	tRNA	2170855	2170930	.	-	.	ID=rna33;Parent=gene1992;anticodon=(pos:complement(2170895..2170897));gbkey=tRNA;product=tRNA-Asn
NC_017154.1	tRNAscan-SE	exon	2170855	2170930	.	-	.	ID=id162;Parent=rna33;anticodon=(pos:complement(2170895..2170897));gbkey=tRNA;product=tRNA-Asn
NC_017154.1	RefSeq	gene	2171233	2171973	.	-	.	ID=gene1993;Name=YPD4_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10010;old_locus_tag=YPD4_1685
NC_017154.1	Protein Homology	CDS	2171233	2171973	.	-	0	ID=cds1957;Parent=gene1993;Dbxref=Genbank:WP_002227954.1;Name=WP_002227954.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002227954.1;transl_table=11
NC_017154.1	RefSeq	gene	2171970	2173318	.	-	.	ID=gene1994;Name=YPD4_RS10015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10015;pseudo=true
NC_017154.1	Protein Homology	CDS	2171970	2173318	.	-	0	ID=cds1958;Parent=gene1994;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2173334	2175898	.	-	.	ID=gene1995;Name=YPD4_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10020;old_locus_tag=YPD4_1688
NC_017154.1	Protein Homology	CDS	2173334	2175898	.	-	0	ID=cds1959;Parent=gene1995;Dbxref=Genbank:WP_002212750.1;Name=WP_002212750.1;gbkey=CDS;product=ferrous iron transporter B;protein_id=WP_002212750.1;transl_table=11
NC_017154.1	RefSeq	gene	2175974	2176618	.	-	.	ID=gene1996;Name=YPD4_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10025;old_locus_tag=YPD4_1689
NC_017154.1	Protein Homology	CDS	2175974	2176618	.	-	0	ID=cds1960;Parent=gene1996;Dbxref=Genbank:WP_002212747.1;Name=WP_002212747.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002212747.1;transl_table=11
NC_017154.1	RefSeq	gene	2176711	2177241	.	-	.	ID=gene1997;Name=YPD4_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10030;old_locus_tag=YPD4_1690
NC_017154.1	Protein Homology	CDS	2176711	2177241	.	-	0	ID=cds1961;Parent=gene1997;Dbxref=Genbank:WP_002213971.1;Name=WP_002213971.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002213971.1;transl_table=11
NC_017154.1	RefSeq	gene	2177754	2181482	.	-	.	ID=gene1998;Name=YPD4_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10035;old_locus_tag=YPD4_1691
NC_017154.1	Protein Homology	CDS	2177754	2181482	.	-	0	ID=cds1962;Parent=gene1998;Dbxref=Genbank:WP_002220434.1;Name=WP_002220434.1;gbkey=CDS;product=histidine protein kinase;protein_id=WP_002220434.1;transl_table=11
NC_017154.1	RefSeq	gene	2181580	2182212	.	-	.	ID=gene1999;Name=YPD4_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10040;old_locus_tag=YPD4_1692
NC_017154.1	Protein Homology	CDS	2181580	2182212	.	-	0	ID=cds1963;Parent=gene1999;Dbxref=Genbank:WP_002212073.1;Name=WP_002212073.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002212073.1;transl_table=11
NC_017154.1	RefSeq	gene	2183038	2184360	.	-	.	ID=gene2000;Name=YPD4_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10045;old_locus_tag=YPD4_1693
NC_017154.1	Protein Homology	CDS	2183038	2184360	.	-	0	ID=cds1964;Parent=gene2000;Dbxref=Genbank:WP_015683931.1;Name=WP_015683931.1;gbkey=CDS;product=4-hydroxybutyrate CoA-transferase;protein_id=WP_015683931.1;transl_table=11
NC_017154.1	RefSeq	gene	2184383	2184910	.	-	.	ID=gene2001;Name=YPD4_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10050;old_locus_tag=YPD4_1694
NC_017154.1	Protein Homology	CDS	2184383	2184910	.	-	0	ID=cds1965;Parent=gene2001;Dbxref=Genbank:WP_002212069.1;Name=WP_002212069.1;gbkey=CDS;product=molybdenum cofactor biosynthesis protein MoeC;protein_id=WP_002212069.1;transl_table=11
NC_017154.1	RefSeq	gene	2184975	2185817	.	-	.	ID=gene2002;Name=YPD4_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10055;old_locus_tag=YPD4_1695
NC_017154.1	Protein Homology	CDS	2184975	2185817	.	-	0	ID=cds1966;Parent=gene2002;Dbxref=Genbank:WP_002212068.1;Name=WP_002212068.1;gbkey=CDS;product=citrate lyase subunit beta;protein_id=WP_002212068.1;transl_table=11
NC_017154.1	RefSeq	gene	2185912	2186790	.	+	.	ID=gene2003;Name=YPD4_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10060;old_locus_tag=YPD4_1696
NC_017154.1	Protein Homology	CDS	2185912	2186790	.	+	0	ID=cds1967;Parent=gene2003;Dbxref=Genbank:WP_002212067.1;Name=WP_002212067.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212067.1;transl_table=11
NC_017154.1	RefSeq	gene	2186865	2187338	.	-	.	ID=gene2004;Name=YPD4_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10065;old_locus_tag=YPD4_1697
NC_017154.1	Protein Homology	CDS	2186865	2187338	.	-	0	ID=cds1968;Parent=gene2004;Dbxref=Genbank:WP_002212066.1;Name=WP_002212066.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002212066.1;transl_table=11
NC_017154.1	RefSeq	gene	2187363	2187923	.	-	.	ID=gene2005;Name=YPD4_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10070;old_locus_tag=YPD4_1698
NC_017154.1	Protein Homology	CDS	2187363	2187923	.	-	0	ID=cds1969;Parent=gene2005;Dbxref=Genbank:WP_002212065.1;Name=WP_002212065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212065.1;transl_table=11
NC_017154.1	RefSeq	gene	2188143	2189372	.	-	.	ID=gene2006;Name=YPD4_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10075;old_locus_tag=YPD4_1699
NC_017154.1	Protein Homology	CDS	2188143	2189372	.	-	0	ID=cds1970;Parent=gene2006;Dbxref=Genbank:WP_002212064.1;Name=WP_002212064.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002212064.1;transl_table=11
NC_017154.1	RefSeq	gene	2189438	2190307	.	-	.	ID=gene2007;Name=YPD4_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10080;old_locus_tag=YPD4_1700
NC_017154.1	Protein Homology	CDS	2189438	2190307	.	-	0	ID=cds1971;Parent=gene2007;Dbxref=Genbank:WP_002212063.1;Name=WP_002212063.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002212063.1;transl_table=11
NC_017154.1	RefSeq	gene	2190419	2191381	.	+	.	ID=gene2008;Name=YPD4_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10085;old_locus_tag=YPD4_1701
NC_017154.1	Protein Homology	CDS	2190419	2191381	.	+	0	ID=cds1972;Parent=gene2008;Dbxref=Genbank:WP_002212062.1;Name=WP_002212062.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212062.1;transl_table=11
NC_017154.1	RefSeq	gene	2191686	2192285	.	-	.	ID=gene2009;Name=YPD4_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10090;old_locus_tag=YPD4_1702
NC_017154.1	Protein Homology	CDS	2191686	2192285	.	-	0	ID=cds1973;Parent=gene2009;Dbxref=Genbank:WP_002212061.1;Name=WP_002212061.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002212061.1;transl_table=11
NC_017154.1	RefSeq	gene	2192637	2193797	.	+	.	ID=gene2010;Name=YPD4_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10095;old_locus_tag=YPD4_1703
NC_017154.1	Protein Homology	CDS	2192637	2193797	.	+	0	ID=cds1974;Parent=gene2010;Dbxref=Genbank:WP_002212060.1;Name=WP_002212060.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002212060.1;transl_table=11
NC_017154.1	RefSeq	gene	2193993	2195522	.	-	.	ID=gene2011;Name=YPD4_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10100;old_locus_tag=YPD4_1704
NC_017154.1	Protein Homology	CDS	2193993	2195522	.	-	0	ID=cds1975;Parent=gene2011;Dbxref=Genbank:WP_002212059.1;Name=WP_002212059.1;Note=involved in the transporte of L-asparagine;gbkey=CDS;product=L-asparagine permease;protein_id=WP_002212059.1;transl_table=11
NC_017154.1	RefSeq	gene	2196244	2197014	.	-	.	ID=gene2012;Name=YPD4_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10105;old_locus_tag=YPD4_1705
NC_017154.1	Protein Homology	CDS	2196244	2197014	.	-	0	ID=cds1976;Parent=gene2012;Dbxref=Genbank:WP_002212058.1;Name=WP_002212058.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002212058.1;transl_table=11
NC_017154.1	RefSeq	gene	2197567	2197773	.	+	.	ID=gene2013;Name=YPD4_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10110
NC_017154.1	Protein Homology	CDS	2197567	2197773	.	+	0	ID=cds1977;Parent=gene2013;Dbxref=Genbank:WP_002213974.1;Name=WP_002213974.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002213974.1;transl_table=11
NC_017154.1	RefSeq	gene	2198225	2199232	.	+	.	ID=gene2014;Name=YPD4_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10115;old_locus_tag=YPD4_1706
NC_017154.1	Protein Homology	CDS	2198225	2199232	.	+	0	ID=cds1978;Parent=gene2014;Dbxref=Genbank:WP_002212056.1;Name=WP_002212056.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_002212056.1;transl_table=11
NC_017154.1	RefSeq	gene	2199343	2200983	.	+	.	ID=gene2015;Name=YPD4_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10120;old_locus_tag=YPD4_1707
NC_017154.1	Protein Homology	CDS	2199343	2200983	.	+	0	ID=cds1979;Parent=gene2015;Dbxref=Genbank:WP_002213976.1;Name=WP_002213976.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213976.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2200990	2201159	.	+	.	ID=id163;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2201564	2203483	.	+	.	ID=gene2016;Name=YPD4_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10125;old_locus_tag=YPD4_1708
NC_017154.1	Protein Homology	CDS	2201564	2203483	.	+	0	ID=cds1980;Parent=gene2016;Dbxref=Genbank:WP_002213978.1;Name=WP_002213978.1;gbkey=CDS;product=iron permease;protein_id=WP_002213978.1;transl_table=11
NC_017154.1	RefSeq	gene	2203687	2204214	.	+	.	ID=gene2017;Name=YPD4_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10130;old_locus_tag=YPD4_1709
NC_017154.1	Protein Homology	CDS	2203687	2204214	.	+	0	ID=cds1981;Parent=gene2017;Dbxref=Genbank:WP_002212053.1;Name=WP_002212053.1;gbkey=CDS;product=iron transporter;protein_id=WP_002212053.1;transl_table=11
NC_017154.1	RefSeq	gene	2204515	2205924	.	+	.	ID=gene2018;Name=YPD4_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10135;old_locus_tag=YPD4_1710
NC_017154.1	Protein Homology	CDS	2204515	2205924	.	+	0	ID=cds1982;Parent=gene2018;Dbxref=Genbank:WP_002212052.1;Name=WP_002212052.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212052.1;transl_table=11
NC_017154.1	RefSeq	gene	2205927	2207219	.	+	.	ID=gene2019;Name=YPD4_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10140;old_locus_tag=YPD4_1711
NC_017154.1	Protein Homology	CDS	2205927	2207219	.	+	0	ID=cds1983;Parent=gene2019;Dbxref=Genbank:WP_002212051.1;Name=WP_002212051.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212051.1;transl_table=11
NC_017154.1	RefSeq	gene	2207209	2208372	.	+	.	ID=gene2020;Name=YPD4_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10145;old_locus_tag=YPD4_1712
NC_017154.1	Protein Homology	CDS	2207209	2208372	.	+	0	ID=cds1984;Parent=gene2020;Dbxref=Genbank:WP_002212050.1;Name=WP_002212050.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212050.1;transl_table=11
NC_017154.1	RefSeq	gene	2208376	2209089	.	+	.	ID=gene2021;Name=YPD4_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10150;old_locus_tag=YPD4_1713
NC_017154.1	Protein Homology	CDS	2208376	2209089	.	+	0	ID=cds1985;Parent=gene2021;Dbxref=Genbank:WP_002212049.1;Name=WP_002212049.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002212049.1;transl_table=11
NC_017154.1	RefSeq	gene	2209079	2209576	.	+	.	ID=gene2022;Name=YPD4_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10155;old_locus_tag=YPD4_1714
NC_017154.1	Protein Homology	CDS	2209079	2209576	.	+	0	ID=cds1986;Parent=gene2022;Dbxref=Genbank:WP_002212048.1;Name=WP_002212048.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002212048.1;transl_table=11
NC_017154.1	RefSeq	gene	2209576	2209887	.	+	.	ID=gene2023;Name=YPD4_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10160;old_locus_tag=YPD4_1715
NC_017154.1	Protein Homology	CDS	2209576	2209887	.	+	0	ID=cds1987;Parent=gene2023;Dbxref=Genbank:WP_002227951.1;Name=WP_002227951.1;gbkey=CDS;product=cytochrome;protein_id=WP_002227951.1;transl_table=11
NC_017154.1	RefSeq	gene	2210060	2210947	.	+	.	ID=gene2024;Name=YPD4_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10165;old_locus_tag=YPD4_1716
NC_017154.1	Protein Homology	CDS	2210060	2210947	.	+	0	ID=cds1988;Parent=gene2024;Dbxref=Genbank:WP_002212046.1;Name=WP_002212046.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;product=tellurite resistance methyltransferase TehB;protein_id=WP_002212046.1;transl_table=11
NC_017154.1	RefSeq	gene	2211088	2212305	.	+	.	ID=gene2025;Name=YPD4_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10170;old_locus_tag=YPD4_1717
NC_017154.1	Protein Homology	CDS	2211088	2212305	.	+	0	ID=cds1989;Parent=gene2025;Dbxref=Genbank:WP_002212045.1;Name=WP_002212045.1;gbkey=CDS;product=endopeptidase;protein_id=WP_002212045.1;transl_table=11
NC_017154.1	RefSeq	gene	2212974	2215442	.	+	.	ID=gene2026;Name=hmsH;gbkey=Gene;gene=hmsH;gene_biotype=protein_coding;locus_tag=YPD4_RS10175;old_locus_tag=YPD4_1718
NC_017154.1	Protein Homology	CDS	2212974	2215442	.	+	0	ID=cds1990;Parent=gene2026;Dbxref=Genbank:WP_002212044.1;Name=WP_002212044.1;Note=in Yersinia this protein is important for biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsH;product=biofilm PGA synthesis protein pgaA;protein_id=WP_002212044.1;transl_table=11
NC_017154.1	RefSeq	gene	2215455	2217476	.	+	.	ID=gene2027;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=YPD4_RS10180;old_locus_tag=YPD4_1719
NC_017154.1	Protein Homology	CDS	2215455	2217476	.	+	0	ID=cds1991;Parent=gene2027;Dbxref=Genbank:WP_002212043.1;Name=WP_002212043.1;Note=in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine (PGA) export;gbkey=CDS;gene=pgaB;product=biofilm PGA synthesis lipoprotein PgaB;protein_id=WP_002212043.1;transl_table=11
NC_017154.1	RefSeq	gene	2217466	2218800	.	+	.	ID=gene2028;Name=YPD4_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10185;old_locus_tag=YPD4_1720
NC_017154.1	Protein Homology	CDS	2217466	2218800	.	+	0	ID=cds1992;Parent=gene2028;Dbxref=Genbank:WP_002212042.1;Name=WP_002212042.1;Note=predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein;gbkey=CDS;product=N-glycosyltransferase;protein_id=WP_002212042.1;transl_table=11
NC_017154.1	RefSeq	gene	2218797	2219264	.	+	.	ID=gene2029;Name=hmsS;gbkey=Gene;gene=hmsS;gene_biotype=protein_coding;locus_tag=YPD4_RS10190;old_locus_tag=YPD4_1721
NC_017154.1	Protein Homology	CDS	2218797	2219264	.	+	0	ID=cds1993;Parent=gene2029;Dbxref=Genbank:WP_002212041.1;Name=WP_002212041.1;Note=in Yersinia this gene is involved in biofilm formation and hemin adsorption;gbkey=CDS;gene=hmsS;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_002212041.1;transl_table=11
NC_017154.1	RefSeq	gene	2219786	2220496	.	+	.	ID=gene2030;Name=YPD4_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10195;old_locus_tag=YPD4_1722
NC_017154.1	Protein Homology	CDS	2219786	2220496	.	+	0	ID=cds1994;Parent=gene2030;Dbxref=Genbank:WP_002367661.1;Name=WP_002367661.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002367661.1;transl_table=11
NC_017154.1	RefSeq	gene	2220935	2221213	.	+	.	ID=gene2031;Name=YPD4_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10200
NC_017154.1	Protein Homology	CDS	2220935	2221213	.	+	0	ID=cds1995;Parent=gene2031;Dbxref=Genbank:WP_002212038.1;Name=WP_002212038.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212038.1;transl_table=11
NC_017154.1	RefSeq	gene	2221273	2222061	.	+	.	ID=gene2032;Name=YPD4_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10205;old_locus_tag=YPD4_1723
NC_017154.1	Protein Homology	CDS	2221273	2222061	.	+	0	ID=cds1996;Parent=gene2032;Dbxref=Genbank:WP_002212037.1;Name=WP_002212037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212037.1;transl_table=11
NC_017154.1	RefSeq	gene	2222164	2223264	.	-	.	ID=gene2033;Name=YPD4_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10210;old_locus_tag=YPD4_1724
NC_017154.1	Protein Homology	CDS	2222164	2223264	.	-	0	ID=cds1997;Parent=gene2033;Dbxref=Genbank:WP_002212036.1;Name=WP_002212036.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002212036.1;transl_table=11
NC_017154.1	RefSeq	gene	2223813	2225594	.	-	.	ID=gene2034;Name=YPD4_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10215;old_locus_tag=YPD4_1725
NC_017154.1	Protein Homology	CDS	2223813	2225594	.	-	0	ID=cds1998;Parent=gene2034;Dbxref=Genbank:WP_002212035.1;Name=WP_002212035.1;gbkey=CDS;product=nitrate/nitrite two-component system sensor histidine kinase;protein_id=WP_002212035.1;transl_table=11
NC_017154.1	RefSeq	gene	2225904	2227325	.	+	.	ID=gene2035;Name=YPD4_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10220;old_locus_tag=YPD4_1726
NC_017154.1	Protein Homology	CDS	2225904	2227325	.	+	0	ID=cds1999;Parent=gene2035;Dbxref=Genbank:WP_002212033.1;Name=WP_002212033.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002212033.1;transl_table=11
NC_017154.1	RefSeq	gene	2227627	2227770	.	+	.	ID=gene2036;Name=YPD4_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10225
NC_017154.1	Protein Homology	CDS	2227627	2227770	.	+	0	ID=cds2000;Parent=gene2036;Dbxref=Genbank:WP_002353347.1;Name=WP_002353347.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353347.1;transl_table=11
NC_017154.1	RefSeq	gene	2227968	2229212	.	+	.	ID=gene2037;Name=YPD4_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10230;old_locus_tag=YPD4_1727
NC_017154.1	Protein Homology	CDS	2227968	2229212	.	+	0	ID=cds2001;Parent=gene2037;Dbxref=Genbank:WP_002216140.1;Name=WP_002216140.1;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;gbkey=CDS;product=succinylornithine aminotransferase;protein_id=WP_002216140.1;transl_table=11
NC_017154.1	RefSeq	gene	2229242	2230294	.	+	.	ID=gene2038;Name=YPD4_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10235;old_locus_tag=YPD4_1728
NC_017154.1	Protein Homology	CDS	2229242	2230294	.	+	0	ID=cds2002;Parent=gene2038;Dbxref=Genbank:WP_002212031.1;Name=WP_002212031.1;gbkey=CDS;product=arginine N-succinyltransferase;protein_id=WP_002212031.1;transl_table=11
NC_017154.1	RefSeq	gene	2230291	2231808	.	+	.	ID=gene2039;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=YPD4_RS10240;old_locus_tag=YPD4_1729
NC_017154.1	Protein Homology	CDS	2230291	2231808	.	+	0	ID=cds2003;Parent=gene2039;Dbxref=Genbank:WP_002212030.1;Name=WP_002212030.1;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;gbkey=CDS;gene=astD;product=N-succinylglutamate 5-semialdehyde dehydrogenase;protein_id=WP_002212030.1;transl_table=11
NC_017154.1	RefSeq	gene	2231832	2233175	.	+	.	ID=gene2040;Name=YPD4_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10245;old_locus_tag=YPD4_1730
NC_017154.1	Protein Homology	CDS	2231832	2233175	.	+	0	ID=cds2004;Parent=gene2040;Dbxref=Genbank:WP_002212029.1;Name=WP_002212029.1;gbkey=CDS;product=N-succinylarginine dihydrolase;protein_id=WP_002212029.1;transl_table=11
NC_017154.1	RefSeq	gene	2233236	2234228	.	+	.	ID=gene2041;Name=YPD4_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10250;old_locus_tag=YPD4_1731
NC_017154.1	Protein Homology	CDS	2233236	2234228	.	+	0	ID=cds2005;Parent=gene2041;Dbxref=Genbank:WP_002212028.1;Name=WP_002212028.1;gbkey=CDS;product=succinylglutamate desuccinylase;protein_id=WP_002212028.1;transl_table=11
NC_017154.1	RefSeq	gene	2234964	2235911	.	+	.	ID=gene2042;Name=YPD4_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10255;old_locus_tag=YPD4_1732
NC_017154.1	Protein Homology	CDS	2234964	2235911	.	+	0	ID=cds2006;Parent=gene2042;Dbxref=Genbank:WP_002212026.1;Name=WP_002212026.1;gbkey=CDS;product=porin;protein_id=WP_002212026.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2235836	2237795	.	+	.	ID=id164;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2236483	2236948	.	+	.	ID=gene2043;Name=YPD4_RS10260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10260;pseudo=true
NC_017154.1	Protein Homology	CDS	2236483	2236948	.	+	0	ID=cds2007;Parent=gene2043;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2236948	2237727	.	+	.	ID=gene2044;Name=YPD4_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10265;old_locus_tag=YPD4_1734
NC_017154.1	Protein Homology	CDS	2236948	2237727	.	+	0	ID=cds2008;Parent=gene2044;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	2238288	2239094	.	-	.	ID=gene2045;Name=YPD4_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10270;old_locus_tag=YPD4_1735
NC_017154.1	Protein Homology	CDS	2238288	2239094	.	-	0	ID=cds2009;Parent=gene2045;Dbxref=Genbank:WP_002211282.1;Name=WP_002211282.1;gbkey=CDS;product=N-formylglutamate deformylase;protein_id=WP_002211282.1;transl_table=11
NC_017154.1	RefSeq	gene	2239091	2240311	.	-	.	ID=gene2046;Name=YPD4_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10275;old_locus_tag=YPD4_1736
NC_017154.1	Protein Homology	CDS	2239091	2240311	.	-	0	ID=cds2010;Parent=gene2046;Dbxref=Genbank:WP_002211281.1;Name=WP_002211281.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;product=imidazolonepropionase;protein_id=WP_002211281.1;transl_table=11
NC_017154.1	RefSeq	gene	2240515	2241282	.	-	.	ID=gene2047;Name=YPD4_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10280;old_locus_tag=YPD4_1737
NC_017154.1	Protein Homology	CDS	2240515	2241282	.	-	0	ID=cds2011;Parent=gene2047;Dbxref=Genbank:WP_002211280.1;Name=WP_002211280.1;gbkey=CDS;product=histidine utilization repressor;protein_id=WP_002211280.1;transl_table=11
NC_017154.1	RefSeq	gene	2241430	2242800	.	+	.	ID=gene2048;Name=YPD4_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10285;old_locus_tag=YPD4_1738
NC_017154.1	Protein Homology	CDS	2241430	2242800	.	+	0	ID=cds2012;Parent=gene2048;Dbxref=Genbank:WP_002211279.1;Name=WP_002211279.1;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;gbkey=CDS;product=N-formimino-L-glutamate deiminase;protein_id=WP_002211279.1;transl_table=11
NC_017154.1	RefSeq	gene	2242800	2243372	.	+	.	ID=gene2049;Name=YPD4_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10290;old_locus_tag=YPD4_1739
NC_017154.1	Protein Homology	CDS	2242800	2243372	.	+	0	ID=cds2013;Parent=gene2049;Dbxref=Genbank:WP_002211278.1;Name=WP_002211278.1;gbkey=CDS;product=cold inducible protein Ves;protein_id=WP_002211278.1;transl_table=11
NC_017154.1	RefSeq	gene	2243550	2245154	.	-	.	ID=gene2050;Name=YPD4_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10295;old_locus_tag=YPD4_1740
NC_017154.1	Protein Homology	CDS	2243550	2245154	.	-	0	ID=cds2014;Parent=gene2050;Dbxref=Genbank:WP_002211277.1;Name=WP_002211277.1;gbkey=CDS;product=chorismate-binding enzyme domain protein;protein_id=WP_002211277.1;transl_table=11
NC_017154.1	RefSeq	gene	2246193	2246702	.	+	.	ID=gene2051;Name=YPD4_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10300;old_locus_tag=YPD4_1741
NC_017154.1	Protein Homology	CDS	2246193	2246702	.	+	0	ID=cds2015;Parent=gene2051;Dbxref=Genbank:WP_002214339.1;Name=WP_002214339.1;gbkey=CDS;product=thiolase;protein_id=WP_002214339.1;transl_table=11
NC_017154.1	RefSeq	gene	2246671	2247201	.	+	.	ID=gene2052;Name=YPD4_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10305;old_locus_tag=YPD4_1742
NC_017154.1	Protein Homology	CDS	2246671	2247201	.	+	0	ID=cds2016;Parent=gene2052;Dbxref=Genbank:WP_002214337.1;Name=WP_002214337.1;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002214337.1;transl_table=11
NC_017154.1	RefSeq	gene	2247215	2248231	.	+	.	ID=gene2053;Name=YPD4_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10310;old_locus_tag=YPD4_1743
NC_017154.1	Protein Homology	CDS	2247215	2248231	.	+	0	ID=cds2017;Parent=gene2053;Dbxref=Genbank:WP_002211275.1;Name=WP_002211275.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211275.1;transl_table=11
NC_017154.1	RefSeq	gene	2248224	2249030	.	+	.	ID=gene2054;Name=YPD4_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10315;old_locus_tag=YPD4_1744
NC_017154.1	Protein Homology	CDS	2248224	2249030	.	+	0	ID=cds2018;Parent=gene2054;Dbxref=Genbank:WP_002214335.1;Name=WP_002214335.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002214335.1;transl_table=11
NC_017154.1	RefSeq	gene	2249027	2250313	.	+	.	ID=gene2055;Name=YPD4_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10320;old_locus_tag=YPD4_1745
NC_017154.1	Protein Homology	CDS	2249027	2250313	.	+	0	ID=cds2019;Parent=gene2055;Dbxref=Genbank:WP_002211273.1;Name=WP_002211273.1;gbkey=CDS;product=coenzyme F390 synthetase;protein_id=WP_002211273.1;transl_table=11
NC_017154.1	RefSeq	gene	2250447	2251409	.	+	.	ID=gene2056;Name=YPD4_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10325;old_locus_tag=YPD4_1746
NC_017154.1	Protein Homology	CDS	2250447	2251409	.	+	0	ID=cds2020;Parent=gene2056;Dbxref=Genbank:WP_002211271.1;Name=WP_002211271.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211271.1;transl_table=11
NC_017154.1	RefSeq	gene	2251409	2252563	.	+	.	ID=gene2057;Name=YPD4_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10330;old_locus_tag=YPD4_1747
NC_017154.1	Protein Homology	CDS	2251409	2252563	.	+	0	ID=cds2021;Parent=gene2057;Dbxref=Genbank:WP_002214329.1;Name=WP_002214329.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002214329.1;transl_table=11
NC_017154.1	RefSeq	gene	2252560	2253144	.	+	.	ID=gene2058;Name=YPD4_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10335;old_locus_tag=YPD4_1748
NC_017154.1	Protein Homology	CDS	2252560	2253144	.	+	0	ID=cds2022;Parent=gene2058;Dbxref=Genbank:WP_002211270.1;Name=WP_002211270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211270.1;transl_table=11
NC_017154.1	RefSeq	gene	2253141	2254328	.	+	.	ID=gene2059;Name=YPD4_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10340;old_locus_tag=YPD4_1749
NC_017154.1	Protein Homology	CDS	2253141	2254328	.	+	0	ID=cds2023;Parent=gene2059;Dbxref=Genbank:WP_002211269.1;Name=WP_002211269.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002211269.1;transl_table=11
NC_017154.1	RefSeq	gene	2254489	2254953	.	-	.	ID=gene2060;Name=YPD4_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10345;old_locus_tag=YPD4_1750
NC_017154.1	Protein Homology	CDS	2254489	2254953	.	-	0	ID=cds2024;Parent=gene2060;Dbxref=Genbank:WP_002211268.1;Name=WP_002211268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211268.1;transl_table=11
NC_017154.1	RefSeq	gene	2255123	2256781	.	-	.	ID=gene2061;Name=YPD4_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10350;old_locus_tag=YPD4_1751
NC_017154.1	Protein Homology	CDS	2255123	2256781	.	-	0	ID=cds2025;Parent=gene2061;Dbxref=Genbank:WP_002211267.1;Name=WP_002211267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211267.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2256827	2258146	.	+	.	ID=id165;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2256900	2258108	.	+	.	ID=gene2062;Name=YPD4_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10355;old_locus_tag=YPD4_1752
NC_017154.1	Protein Homology	CDS	2256900	2258108	.	+	0	ID=cds2026;Parent=gene2062;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	2258228	2260390	.	-	.	ID=gene2063;Name=YPD4_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10360;old_locus_tag=YPD4_1753
NC_017154.1	Protein Homology	CDS	2258228	2260390	.	-	0	ID=cds2027;Parent=gene2063;Dbxref=Genbank:WP_002211266.1;Name=WP_002211266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211266.1;transl_table=11
NC_017154.1	RefSeq	gene	2260968	2263079	.	+	.	ID=gene2064;Name=YPD4_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10365;old_locus_tag=YPD4_1754
NC_017154.1	Protein Homology	CDS	2260968	2263079	.	+	0	ID=cds2028;Parent=gene2064;Dbxref=Genbank:WP_002211265.1;Name=WP_002211265.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211265.1;transl_table=11
NC_017154.1	RefSeq	gene	2263082	2263270	.	-	.	ID=gene2065;Name=YPD4_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10370
NC_017154.1	Protein Homology	CDS	2263082	2263270	.	-	0	ID=cds2029;Parent=gene2065;Dbxref=Genbank:WP_002211264.1;Name=WP_002211264.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211264.1;transl_table=11
NC_017154.1	RefSeq	gene	2263326	2263963	.	+	.	ID=gene2066;Name=YPD4_RS10375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10375;pseudo=true
NC_017154.1	Protein Homology	CDS	2263326	2263963	.	+	0	ID=cds2030;Parent=gene2066;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2264098	2264757	.	-	.	ID=gene2067;Name=YPD4_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10380;old_locus_tag=YPD4_1756
NC_017154.1	Protein Homology	CDS	2264098	2264757	.	-	0	ID=cds2031;Parent=gene2067;Dbxref=Genbank:WP_002211262.1;Name=WP_002211262.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002211262.1;transl_table=11
NC_017154.1	RefSeq	gene	2264862	2265541	.	-	.	ID=gene2068;Name=YPD4_RS10385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10385;old_locus_tag=YPD4_1757;pseudo=true
NC_017154.1	Protein Homology	CDS	2264862	2265541	.	-	0	ID=cds2032;Parent=gene2068;exception=annotated by transcript or proteomic data;gbkey=CDS;product=dehydrogenase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2265882	2266832	.	-	.	ID=gene2069;Name=YPD4_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10390;old_locus_tag=YPD4_1758
NC_017154.1	Protein Homology	CDS	2265882	2266832	.	-	0	ID=cds2033;Parent=gene2069;Dbxref=Genbank:WP_002211260.1;Name=WP_002211260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211260.1;transl_table=11
NC_017154.1	RefSeq	gene	2266819	2267751	.	-	.	ID=gene2070;Name=YPD4_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10395;old_locus_tag=YPD4_1759
NC_017154.1	Protein Homology	CDS	2266819	2267751	.	-	0	ID=cds2034;Parent=gene2070;Dbxref=Genbank:WP_002211259.1;Name=WP_002211259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211259.1;transl_table=11
NC_017154.1	RefSeq	gene	2267757	2268662	.	-	.	ID=gene2071;Name=YPD4_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10400;old_locus_tag=YPD4_1760
NC_017154.1	Protein Homology	CDS	2267757	2268662	.	-	0	ID=cds2035;Parent=gene2071;Dbxref=Genbank:WP_002211258.1;Name=WP_002211258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211258.1;transl_table=11
NC_017154.1	RefSeq	gene	2269453	2270526	.	-	.	ID=gene2072;Name=YPD4_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10405;old_locus_tag=YPD4_1761
NC_017154.1	Protein Homology	CDS	2269453	2270526	.	-	0	ID=cds2036;Parent=gene2072;Dbxref=Genbank:WP_002211257.1;Name=WP_002211257.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002211257.1;transl_table=11
NC_017154.1	RefSeq	gene	2270739	2271209	.	-	.	ID=gene2073;Name=YPD4_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10410;old_locus_tag=YPD4_1762
NC_017154.1	Protein Homology	CDS	2270739	2271209	.	-	0	ID=cds2037;Parent=gene2073;Dbxref=Genbank:WP_002211256.1;Name=WP_002211256.1;gbkey=CDS;product=cupin;protein_id=WP_002211256.1;transl_table=11
NC_017154.1	RefSeq	gene	2271264	2271686	.	-	.	ID=gene2074;Name=YPD4_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10415;old_locus_tag=YPD4_1763
NC_017154.1	Protein Homology	CDS	2271264	2271686	.	-	0	ID=cds2038;Parent=gene2074;Dbxref=Genbank:WP_002211255.1;Name=WP_002211255.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002211255.1;transl_table=11
NC_017154.1	RefSeq	gene	2271963	2273348	.	-	.	ID=gene2075;Name=YPD4_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10420;old_locus_tag=YPD4_1764
NC_017154.1	Protein Homology	CDS	2271963	2273348	.	-	0	ID=cds2039;Parent=gene2075;Dbxref=Genbank:WP_002211254.1;Name=WP_002211254.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002211254.1;transl_table=11
NC_017154.1	RefSeq	gene	2273360	2274052	.	-	.	ID=gene2076;Name=YPD4_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10425;old_locus_tag=YPD4_1765
NC_017154.1	Protein Homology	CDS	2273360	2274052	.	-	0	ID=cds2040;Parent=gene2076;Dbxref=Genbank:WP_002211253.1;Name=WP_002211253.1;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211253.1;transl_table=11
NC_017154.1	RefSeq	gene	2274317	2275408	.	+	.	ID=gene2077;Name=YPD4_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10430;old_locus_tag=YPD4_1766
NC_017154.1	Protein Homology	CDS	2274317	2275408	.	+	0	ID=cds2041;Parent=gene2077;Dbxref=Genbank:WP_002211252.1;Name=WP_002211252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211252.1;transl_table=11
NC_017154.1	RefSeq	gene	2275599	2276264	.	+	.	ID=gene2078;Name=YPD4_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10435;old_locus_tag=YPD4_1767
NC_017154.1	Protein Homology	CDS	2275599	2276264	.	+	0	ID=cds2042;Parent=gene2078;Dbxref=Genbank:WP_002211251.1;Name=WP_002211251.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002211251.1;transl_table=11
NC_017154.1	RefSeq	gene	2276279	2276974	.	+	.	ID=gene2079;Name=YPD4_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10440;old_locus_tag=YPD4_1768
NC_017154.1	Protein Homology	CDS	2276279	2276974	.	+	0	ID=cds2043;Parent=gene2079;Dbxref=Genbank:WP_002211250.1;Name=WP_002211250.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211250.1;transl_table=11
NC_017154.1	RefSeq	gene	2277183	2278025	.	-	.	ID=gene2080;Name=YPD4_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10445;old_locus_tag=YPD4_1769
NC_017154.1	Protein Homology	CDS	2277183	2278025	.	-	0	ID=cds2044;Parent=gene2080;Dbxref=Genbank:WP_002211249.1;Name=WP_002211249.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211249.1;transl_table=11
NC_017154.1	RefSeq	gene	2278656	2279312	.	+	.	ID=gene2081;Name=YPD4_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10450;old_locus_tag=YPD4_1770
NC_017154.1	Protein Homology	CDS	2278656	2279312	.	+	0	ID=cds2045;Parent=gene2081;Dbxref=Genbank:WP_002216887.1;Name=WP_002216887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216887.1;transl_table=11
NC_017154.1	RefSeq	gene	2279309	2280139	.	+	.	ID=gene2082;Name=YPD4_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10455;old_locus_tag=YPD4_1771
NC_017154.1	Protein Homology	CDS	2279309	2280139	.	+	0	ID=cds2046;Parent=gene2082;Dbxref=Genbank:WP_002211248.1;Name=WP_002211248.1;gbkey=CDS;product=esterase;protein_id=WP_002211248.1;transl_table=11
NC_017154.1	RefSeq	gene	2280147	2280545	.	+	.	ID=gene2083;Name=YPD4_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10460;old_locus_tag=YPD4_1772
NC_017154.1	Protein Homology	CDS	2280147	2280545	.	+	0	ID=cds2047;Parent=gene2083;Dbxref=Genbank:WP_002211247.1;Name=WP_002211247.1;gbkey=CDS;product=rhodanese;protein_id=WP_002211247.1;transl_table=11
NC_017154.1	RefSeq	gene	2280593	2281102	.	-	.	ID=gene2084;Name=YPD4_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10465
NC_017154.1	Protein Homology	CDS	2280593	2281102	.	-	0	ID=cds2048;Parent=gene2084;Dbxref=Genbank:WP_002211246.1;Name=WP_002211246.1;gbkey=CDS;product=integrase;protein_id=WP_002211246.1;transl_table=11
NC_017154.1	RefSeq	gene	2281120	2281308	.	-	.	ID=gene2085;Name=YPD4_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10470
NC_017154.1	Protein Homology	CDS	2281120	2281308	.	-	0	ID=cds2049;Parent=gene2085;Dbxref=Genbank:WP_002354205.1;Name=WP_002354205.1;gbkey=CDS;product=transposase;protein_id=WP_002354205.1;transl_table=11
NC_017154.1	RefSeq	gene	2281731	2282822	.	-	.	ID=gene2086;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=YPD4_RS10475;old_locus_tag=YPD4_1774
NC_017154.1	Protein Homology	CDS	2281731	2282822	.	-	0	ID=cds2050;Parent=gene2086;Dbxref=Genbank:WP_002211245.1;Name=WP_002211245.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_002211245.1;transl_table=11
NC_017154.1	RefSeq	gene	2282986	2283575	.	-	.	ID=gene2087;Name=YPD4_RS10480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10480;old_locus_tag=YPD4_1775;pseudo=true
NC_017154.1	Protein Homology	CDS	2282986	2283575	.	-	0	ID=cds2051;Parent=gene2087;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptidyl-tRNA hydrolase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2283937	2284209	.	+	.	ID=gene2088;Name=YPD4_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10485
NC_017154.1	Protein Homology	CDS	2283937	2284209	.	+	0	ID=cds2052;Parent=gene2088;Dbxref=Genbank:WP_002211242.1;Name=WP_002211242.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211242.1;transl_table=11
NC_017154.1	RefSeq	gene	2284200	2284313	.	-	.	ID=gene2089;Name=YPD4_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10490
NC_017154.1	Protein Homology	CDS	2284200	2284313	.	-	0	ID=cds2053;Parent=gene2089;Dbxref=Genbank:WP_002211241.1;Name=WP_002211241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211241.1;transl_table=11
NC_017154.1	RefSeq	gene	2284411	2285358	.	-	.	ID=gene2090;Name=YPD4_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10495;old_locus_tag=YPD4_1776
NC_017154.1	Protein Homology	CDS	2284411	2285358	.	-	0	ID=cds2054;Parent=gene2090;Dbxref=Genbank:WP_002211240.1;Name=WP_002211240.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_002211240.1;transl_table=11
NC_017154.1	RefSeq	gene	2285408	2285518	.	-	.	ID=gene2091;Name=YPD4_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10500
NC_017154.1	Protein Homology	CDS	2285408	2285518	.	-	0	ID=cds2055;Parent=gene2091;Dbxref=Genbank:WP_002218163.1;Name=WP_002218163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218163.1;transl_table=11
NC_017154.1	RefSeq	gene	2285699	2286598	.	-	.	ID=gene2092;Name=YPD4_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10505;old_locus_tag=YPD4_1777
NC_017154.1	Protein Homology	CDS	2285699	2286598	.	-	0	ID=cds2056;Parent=gene2092;Dbxref=Genbank:WP_002211239.1;Name=WP_002211239.1;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11
NC_017154.1	RefSeq	gene	2286600	2287223	.	-	.	ID=gene2093;Name=YPD4_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10510;old_locus_tag=YPD4_1778
NC_017154.1	Protein Homology	CDS	2286600	2287223	.	-	0	ID=cds2057;Parent=gene2093;Dbxref=Genbank:WP_002224468.1;Name=WP_002224468.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_002224468.1;transl_table=11
NC_017154.1	RefSeq	gene	2287529	2288791	.	+	.	ID=gene2094;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=YPD4_RS10515;old_locus_tag=YPD4_1779
NC_017154.1	Protein Homology	CDS	2287529	2288791	.	+	0	ID=cds2058;Parent=gene2094;Dbxref=Genbank:WP_002211237.1;Name=WP_002211237.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_002211237.1;transl_table=11
NC_017154.1	RefSeq	gene	2288824	2289906	.	+	.	ID=gene2095;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=YPD4_RS10520;old_locus_tag=YPD4_1780
NC_017154.1	Protein Homology	CDS	2288824	2289906	.	+	0	ID=cds2059;Parent=gene2095;Dbxref=Genbank:WP_002211236.1;Name=WP_002211236.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11
NC_017154.1	RefSeq	gene	2289906	2290736	.	+	.	ID=gene2096;Name=YPD4_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10525;old_locus_tag=YPD4_1781
NC_017154.1	Protein Homology	CDS	2289906	2290736	.	+	0	ID=cds2060;Parent=gene2096;Dbxref=Genbank:WP_002211235.1;Name=WP_002211235.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=release factor glutamine methyltransferase;protein_id=WP_002211235.1;transl_table=11
NC_017154.1	RefSeq	gene	2290800	2291201	.	+	.	ID=gene2097;Name=YPD4_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10530;old_locus_tag=YPD4_1782
NC_017154.1	Protein Homology	CDS	2290800	2291201	.	+	0	ID=cds2061;Parent=gene2097;Dbxref=Genbank:WP_002211234.1;Name=WP_002211234.1;gbkey=CDS;product=siroheme synthase;protein_id=WP_002211234.1;transl_table=11
NC_017154.1	RefSeq	gene	2291198	2292007	.	+	.	ID=gene2098;Name=YPD4_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10535;old_locus_tag=YPD4_1783
NC_017154.1	Protein Homology	CDS	2291198	2292007	.	+	0	ID=cds2062;Parent=gene2098;Dbxref=Genbank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211233.1;transl_table=11
NC_017154.1	RefSeq	gene	2292103	2292957	.	+	.	ID=gene2099;Name=YPD4_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10540;old_locus_tag=YPD4_1784
NC_017154.1	Protein Homology	CDS	2292103	2292957	.	+	0	ID=cds2063;Parent=gene2099;Dbxref=Genbank:WP_002211232.1;Name=WP_002211232.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_002211232.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2293097	2293268	.	+	.	ID=id166;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2293311	2295009	.	-	.	ID=gene2100;Name=YPD4_RS10545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10545;pseudo=true
NC_017154.1	Protein Homology	CDS	2293311	2295009	.	-	0	ID=cds2064;Parent=gene2100;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2295248	2295544	.	-	.	ID=gene2101;Name=YPD4_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10550
NC_017154.1	Protein Homology	CDS	2295248	2295544	.	-	0	ID=cds2065;Parent=gene2101;Dbxref=Genbank:WP_002217150.1;Name=WP_002217150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217150.1;transl_table=11
NC_017154.1	RefSeq	gene	2295845	2295934	.	-	.	ID=gene2102;Name=YPD4_RS10555;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS10555;old_locus_tag=YPD4_t29
NC_017154.1	tRNAscan-SE	tRNA	2295845	2295934	.	-	.	ID=rna34;Parent=gene2102;anticodon=(pos:complement(2295898..2295900));gbkey=tRNA;product=tRNA-Ser
NC_017154.1	tRNAscan-SE	exon	2295845	2295934	.	-	.	ID=id167;Parent=rna34;anticodon=(pos:complement(2295898..2295900));gbkey=tRNA;product=tRNA-Ser
NC_017154.1	RefSeq	gene	2296076	2296951	.	-	.	ID=gene2103;Name=YPD4_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10560;old_locus_tag=YPD4_1787
NC_017154.1	Protein Homology	CDS	2296076	2296951	.	-	0	ID=cds2066;Parent=gene2103;Dbxref=Genbank:WP_002211229.1;Name=WP_002211229.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211229.1;transl_table=11
NC_017154.1	RefSeq	gene	2297252	2298334	.	-	.	ID=gene2104;Name=YPD4_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10565;old_locus_tag=YPD4_1788
NC_017154.1	Protein Homology	CDS	2297252	2298334	.	-	0	ID=cds2067;Parent=gene2104;Dbxref=Genbank:WP_002211228.1;Name=WP_002211228.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211228.1;transl_table=11
NC_017154.1	RefSeq	gene	2298354	2299190	.	-	.	ID=gene2105;Name=YPD4_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10570;old_locus_tag=YPD4_1789
NC_017154.1	Protein Homology	CDS	2298354	2299190	.	-	0	ID=cds2068;Parent=gene2105;Dbxref=Genbank:WP_002211227.1;Name=WP_002211227.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211227.1;transl_table=11
NC_017154.1	RefSeq	gene	2299187	2300053	.	-	.	ID=gene2106;Name=YPD4_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10575;old_locus_tag=YPD4_1790
NC_017154.1	Protein Homology	CDS	2299187	2300053	.	-	0	ID=cds2069;Parent=gene2106;Dbxref=Genbank:WP_002211226.1;Name=WP_002211226.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211226.1;transl_table=11
NC_017154.1	RefSeq	gene	2300050	2300787	.	-	.	ID=gene2107;Name=YPD4_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10580;old_locus_tag=YPD4_1791
NC_017154.1	Protein Homology	CDS	2300050	2300787	.	-	0	ID=cds2070;Parent=gene2107;Dbxref=Genbank:WP_002211225.1;Name=WP_002211225.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211225.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2300805	2301523	.	+	.	ID=id168;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2300955	2301413	.	+	.	ID=gene2108;Name=YPD4_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10585;old_locus_tag=YPD4_1792
NC_017154.1	Protein Homology	CDS	2300955	2301413	.	+	0	ID=cds2071;Parent=gene2108;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	2301501	2301827	.	-	.	ID=gene2109;Name=YPD4_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10590;old_locus_tag=YPD4_1793
NC_017154.1	Protein Homology	CDS	2301501	2301827	.	-	0	ID=cds2072;Parent=gene2109;Dbxref=Genbank:WP_002211224.1;Name=WP_002211224.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211224.1;transl_table=11
NC_017154.1	RefSeq	gene	2302042	2302872	.	+	.	ID=gene2110;Name=YPD4_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10595;old_locus_tag=YPD4_1794
NC_017154.1	Protein Homology	CDS	2302042	2302872	.	+	0	ID=cds2073;Parent=gene2110;Dbxref=Genbank:WP_002211223.1;Name=WP_002211223.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002211223.1;transl_table=11
NC_017154.1	RefSeq	gene	2302886	2303998	.	+	.	ID=gene2111;Name=YPD4_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10600;old_locus_tag=YPD4_1795
NC_017154.1	Protein Homology	CDS	2302886	2303998	.	+	0	ID=cds2074;Parent=gene2111;Dbxref=Genbank:WP_002211222.1;Name=WP_002211222.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211222.1;transl_table=11
NC_017154.1	RefSeq	gene	2304255	2304344	.	-	.	ID=gene2112;Name=YPD4_RS10605;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS10605;old_locus_tag=YPD4_t30
NC_017154.1	tRNAscan-SE	tRNA	2304255	2304344	.	-	.	ID=rna35;Parent=gene2112;anticodon=(pos:complement(2304308..2304310));gbkey=tRNA;product=tRNA-Ser
NC_017154.1	tRNAscan-SE	exon	2304255	2304344	.	-	.	ID=id169;Parent=rna35;anticodon=(pos:complement(2304308..2304310));gbkey=tRNA;product=tRNA-Ser
NC_017154.1	RefSeq	gene	2304633	2305370	.	+	.	ID=gene2113;Name=YPD4_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10610;old_locus_tag=YPD4_1796
NC_017154.1	Protein Homology	CDS	2304633	2305370	.	+	0	ID=cds2075;Parent=gene2113;Dbxref=Genbank:WP_015683937.1;Name=WP_015683937.1;gbkey=CDS;product=hydrolase;protein_id=WP_015683937.1;transl_table=11
NC_017154.1	RefSeq	gene	2305407	2305967	.	+	.	ID=gene2114;Name=YPD4_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10615;old_locus_tag=YPD4_1797
NC_017154.1	Protein Homology	CDS	2305407	2305967	.	+	0	ID=cds2076;Parent=gene2114;Dbxref=Genbank:WP_002211220.1;Name=WP_002211220.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002211220.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2306021	2306359	.	+	.	ID=id170;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2306421	2306984	.	-	.	ID=gene2115;Name=YPD4_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10620;old_locus_tag=YPD4_1798
NC_017154.1	Protein Homology	CDS	2306421	2306984	.	-	0	ID=cds2077;Parent=gene2115;Dbxref=Genbank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11
NC_017154.1	RefSeq	gene	2307379	2308584	.	-	.	ID=gene2116;Name=YPD4_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10625;old_locus_tag=YPD4_1799
NC_017154.1	Protein Homology	CDS	2307379	2308584	.	-	0	ID=cds2078;Parent=gene2116;Dbxref=Genbank:WP_002211217.1;Name=WP_002211217.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_002211217.1;transl_table=11
NC_017154.1	RefSeq	gene	2308878	2309462	.	+	.	ID=gene2117;Name=YPD4_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10630
NC_017154.1	Protein Homology	CDS	2308878	2309462	.	+	0	ID=cds2079;Parent=gene2117;Dbxref=Genbank:WP_002211216.1;Name=WP_002211216.1;gbkey=CDS;product=alanine acetyltransferase;protein_id=WP_002211216.1;transl_table=11
NC_017154.1	RefSeq	gene	2310169	2311080	.	+	.	ID=gene2118;Name=YPD4_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10635
NC_017154.1	Protein Homology	CDS	2310169	2311080	.	+	0	ID=cds2080;Parent=gene2118;Dbxref=Genbank:WP_002354211.1;Name=WP_002354211.1;gbkey=CDS;product=virulence factor MviM;protein_id=WP_002354211.1;transl_table=11
NC_017154.1	RefSeq	gene	2311347	2312882	.	+	.	ID=gene2119;Name=YPD4_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10640;old_locus_tag=YPD4_1802
NC_017154.1	Protein Homology	CDS	2311347	2312882	.	+	0	ID=cds2081;Parent=gene2119;Dbxref=Genbank:WP_002211214.1;Name=WP_002211214.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211214.1;transl_table=11
NC_017154.1	RefSeq	gene	2313370	2315030	.	+	.	ID=gene2120;Name=YPD4_RS10645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10645;pseudo=true
NC_017154.1	Protein Homology	CDS	2313370	2315030	.	+	0	ID=cds2082;Parent=gene2120;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemolysin activation protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2315315	2319790	.	+	.	ID=gene2121;Name=YPD4_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10650;old_locus_tag=YPD4_1805
NC_017154.1	Protein Homology	CDS	2315315	2319790	.	+	0	ID=cds2083;Parent=gene2121;Dbxref=Genbank:WP_002369860.1;Name=WP_002369860.1;gbkey=CDS;product=hemolysin;protein_id=WP_002369860.1;transl_table=11
NC_017154.1	RefSeq	gene	2320021	2321751	.	-	.	ID=gene2122;Name=YPD4_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10655;old_locus_tag=YPD4_1806
NC_017154.1	Protein Homology	CDS	2320021	2321751	.	-	0	ID=cds2084;Parent=gene2122;Dbxref=Genbank:WP_002211212.1;Name=WP_002211212.1;gbkey=CDS;product=arginine--tRNA ligase;protein_id=WP_002211212.1;transl_table=11
NC_017154.1	RefSeq	gene	2322350	2322925	.	+	.	ID=gene2123;Name=YPD4_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10660;old_locus_tag=YPD4_1807
NC_017154.1	Protein Homology	CDS	2322350	2322925	.	+	0	ID=cds2085;Parent=gene2123;Dbxref=Genbank:WP_002211210.1;Name=WP_002211210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211210.1;transl_table=11
NC_017154.1	RefSeq	gene	2323157	2323921	.	+	.	ID=gene2124;Name=YPD4_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10665;old_locus_tag=YPD4_1808
NC_017154.1	Protein Homology	CDS	2323157	2323921	.	+	0	ID=cds2086;Parent=gene2124;Dbxref=Genbank:WP_002211209.1;Name=WP_002211209.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_002211209.1;transl_table=11
NC_017154.1	RefSeq	gene	2324114	2325085	.	-	.	ID=gene2125;Name=YPD4_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10670;old_locus_tag=YPD4_1809
NC_017154.1	Protein Homology	CDS	2324114	2325085	.	-	0	ID=cds2087;Parent=gene2125;Dbxref=Genbank:WP_002211208.1;Name=WP_002211208.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_002211208.1;transl_table=11
NC_017154.1	RefSeq	gene	2325082	2325885	.	-	.	ID=gene2126;Name=YPD4_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10675;old_locus_tag=YPD4_1810
NC_017154.1	Protein Homology	CDS	2325082	2325885	.	-	0	ID=cds2088;Parent=gene2126;Dbxref=Genbank:WP_002211207.1;Name=WP_002211207.1;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase;protein_id=WP_002211207.1;transl_table=11
NC_017154.1	RefSeq	gene	2326076	2326471	.	-	.	ID=gene2127;Name=YPD4_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10680;old_locus_tag=YPD4_1811
NC_017154.1	Protein Homology	CDS	2326076	2326471	.	-	0	ID=cds2089;Parent=gene2127;Dbxref=Genbank:WP_002211206.1;Name=WP_002211206.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211206.1;transl_table=11
NC_017154.1	RefSeq	gene	2326651	2327466	.	-	.	ID=gene2128;Name=YPD4_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10685;old_locus_tag=YPD4_1812
NC_017154.1	Protein Homology	CDS	2326651	2327466	.	-	0	ID=cds2090;Parent=gene2128;Dbxref=Genbank:WP_002211205.1;Name=WP_002211205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211205.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2327473	2327938	.	+	.	ID=id171;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2328524	2330320	.	+	.	ID=gene2129;Name=YPD4_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10690;old_locus_tag=YPD4_1813
NC_017154.1	Protein Homology	CDS	2328524	2330320	.	+	0	ID=cds2091;Parent=gene2129;Dbxref=Genbank:WP_002211204.1;Name=WP_002211204.1;gbkey=CDS;product=aspartate--tRNA ligase;protein_id=WP_002211204.1;transl_table=11
NC_017154.1	RefSeq	gene	2330320	2330763	.	+	.	ID=gene2130;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=YPD4_RS10695;old_locus_tag=YPD4_1814
NC_017154.1	Protein Homology	CDS	2330320	2330763	.	+	0	ID=cds2092;Parent=gene2130;Dbxref=Genbank:WP_002211203.1;Name=WP_002211203.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dATP pyrophosphohydrolase;protein_id=WP_002211203.1;transl_table=11
NC_017154.1	RefSeq	gene	2330821	2331564	.	+	.	ID=gene2131;Name=YPD4_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10700;old_locus_tag=YPD4_1815
NC_017154.1	Protein Homology	CDS	2330821	2331564	.	+	0	ID=cds2093;Parent=gene2131;Dbxref=Genbank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211202.1;transl_table=11
NC_017154.1	RefSeq	gene	2331773	2332294	.	+	.	ID=gene2132;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=YPD4_RS10705;old_locus_tag=YPD4_1816
NC_017154.1	Protein Homology	CDS	2331773	2332294	.	+	0	ID=cds2094;Parent=gene2132;Dbxref=Genbank:WP_002211201.1;Name=WP_002211201.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11
NC_017154.1	RefSeq	gene	2332577	2333191	.	+	.	ID=gene2133;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=YPD4_RS10710;old_locus_tag=YPD4_1817
NC_017154.1	Protein Homology	CDS	2332577	2333191	.	+	0	ID=cds2095;Parent=gene2133;Dbxref=Genbank:WP_002211199.1;Name=WP_002211199.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=WP_002211199.1;transl_table=11
NC_017154.1	RefSeq	gene	2333353	2334357	.	+	.	ID=gene2134;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=YPD4_RS10715;old_locus_tag=YPD4_1818
NC_017154.1	Protein Homology	CDS	2333353	2334357	.	+	0	ID=cds2096;Parent=gene2134;Dbxref=Genbank:WP_002211198.1;Name=WP_002211198.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11
NC_017154.1	RefSeq	gene	2334412	2335197	.	-	.	ID=gene2135;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=YPD4_RS10720;old_locus_tag=YPD4_1819
NC_017154.1	Protein Homology	CDS	2334412	2335197	.	-	0	ID=cds2097;Parent=gene2135;Dbxref=Genbank:WP_002211197.1;Name=WP_002211197.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc transporter;protein_id=WP_002211197.1;transl_table=11
NC_017154.1	RefSeq	gene	2335194	2335952	.	-	.	ID=gene2136;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=YPD4_RS10725;old_locus_tag=YPD4_1820
NC_017154.1	Protein Homology	CDS	2335194	2335952	.	-	0	ID=cds2098;Parent=gene2136;Dbxref=Genbank:WP_002228434.1;Name=WP_002228434.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=WP_002228434.1;transl_table=11
NC_017154.1	RefSeq	gene	2336028	2336984	.	+	.	ID=gene2137;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=YPD4_RS10730;old_locus_tag=YPD4_1821
NC_017154.1	Protein Homology	CDS	2336028	2336984	.	+	0	ID=cds2099;Parent=gene2137;Dbxref=Genbank:WP_002227944.1;Name=WP_002227944.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc uptake system protein ZnuA;protein_id=WP_002227944.1;transl_table=11
NC_017154.1	RefSeq	gene	2337005	2338320	.	+	.	ID=gene2138;Name=YPD4_RS10735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10735;old_locus_tag=YPD4_1822;pseudo=true
NC_017154.1	Protein Homology	CDS	2337005	2338320	.	+	0	ID=cds2100;Parent=gene2138;exception=annotated by transcript or proteomic data;gbkey=CDS;product=peptidase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2338587	2339549	.	+	.	ID=gene2139;Name=YPD4_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10740;old_locus_tag=YPD4_1823
NC_017154.1	Protein Homology	CDS	2338587	2339549	.	+	0	ID=cds2101;Parent=gene2139;Dbxref=Genbank:WP_002211194.1;Name=WP_002211194.1;gbkey=CDS;product=lipid A biosynthesis acyltransferase;protein_id=WP_002211194.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2339669	2339845	.	+	.	ID=id172;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2339894	2341336	.	-	.	ID=gene2140;Name=YPD4_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10745;old_locus_tag=YPD4_1824
NC_017154.1	Protein Homology	CDS	2339894	2341336	.	-	0	ID=cds2102;Parent=gene2140;Dbxref=Genbank:WP_002211193.1;Name=WP_002211193.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002211193.1;transl_table=11
NC_017154.1	RefSeq	gene	2341666	2342535	.	-	.	ID=gene2141;Name=YPD4_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10750;old_locus_tag=YPD4_1825
NC_017154.1	Protein Homology	CDS	2341666	2342535	.	-	0	ID=cds2103;Parent=gene2141;Dbxref=Genbank:WP_002211192.1;Name=WP_002211192.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211192.1;transl_table=11
NC_017154.1	RefSeq	gene	2342888	2344372	.	+	.	ID=gene2142;Name=YPD4_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10755;old_locus_tag=YPD4_1826
NC_017154.1	Protein Homology	CDS	2342888	2344372	.	+	0	ID=cds2104;Parent=gene2142;Dbxref=Genbank:WP_002211191.1;Name=WP_002211191.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=WP_002211191.1;transl_table=11
NC_017154.1	RefSeq	gene	2344416	2344607	.	+	.	ID=gene2143;Name=YPD4_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10760
NC_017154.1	Protein Homology	CDS	2344416	2344607	.	+	0	ID=cds2105;Parent=gene2143;Dbxref=Genbank:WP_002216963.1;Name=WP_002216963.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216963.1;transl_table=11
NC_017154.1	RefSeq	gene	2344614	2345255	.	+	.	ID=gene2144;Name=YPD4_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10765;old_locus_tag=YPD4_1827
NC_017154.1	Protein Homology	CDS	2344614	2345255	.	+	0	ID=cds2106;Parent=gene2144;Dbxref=Genbank:WP_002211190.1;Name=WP_002211190.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=ketohydroxyglutarate aldolase;protein_id=WP_002211190.1;transl_table=11
NC_017154.1	RefSeq	gene	2345970	2346413	.	+	.	ID=gene2145;Name=YPD4_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10770;old_locus_tag=YPD4_1828
NC_017154.1	Protein Homology	CDS	2345970	2346413	.	+	0	ID=cds2107;Parent=gene2145;Dbxref=Genbank:WP_002211188.1;Name=WP_002211188.1;gbkey=CDS;product=spermidine export protein MdtJ;protein_id=WP_002211188.1;transl_table=11
NC_017154.1	RefSeq	gene	2346400	2346729	.	+	.	ID=gene2146;Name=YPD4_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10775;old_locus_tag=YPD4_1829
NC_017154.1	Protein Homology	CDS	2346400	2346729	.	+	0	ID=cds2108;Parent=gene2146;Dbxref=Genbank:WP_002211187.1;Name=WP_002211187.1;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtI;protein_id=WP_002211187.1;transl_table=11
NC_017154.1	RefSeq	gene	2346861	2347205	.	-	.	ID=gene2147;Name=YPD4_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10780;old_locus_tag=YPD4_1830
NC_017154.1	Protein Homology	CDS	2346861	2347205	.	-	0	ID=cds2109;Parent=gene2147;Dbxref=Genbank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211186.1;transl_table=11
NC_017154.1	RefSeq	gene	2347336	2349240	.	+	.	ID=gene2148;Name=YPD4_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10785;old_locus_tag=YPD4_1831
NC_017154.1	Protein Homology	CDS	2347336	2349240	.	+	0	ID=cds2110;Parent=gene2148;Dbxref=Genbank:WP_002211185.1;Name=WP_002211185.1;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_002211185.1;transl_table=11
NC_017154.1	RefSeq	gene	2349312	2350010	.	+	.	ID=gene2149;Name=YPD4_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10790;old_locus_tag=YPD4_1832
NC_017154.1	Protein Homology	CDS	2349312	2350010	.	+	0	ID=cds2111;Parent=gene2149;Dbxref=Genbank:WP_002211184.1;Name=WP_002211184.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_002211184.1;transl_table=11
NC_017154.1	RefSeq	gene	2350147	2350752	.	+	.	ID=gene2150;Name=YPD4_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10795;old_locus_tag=YPD4_1833
NC_017154.1	Protein Homology	CDS	2350147	2350752	.	+	0	ID=cds2112;Parent=gene2150;Dbxref=Genbank:WP_002211183.1;Name=WP_002211183.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211183.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2350789	2350904	.	+	.	ID=id173;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2351395	2353083	.	+	.	ID=gene2151;Name=YPD4_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10800;old_locus_tag=YPD4_1834
NC_017154.1	Protein Homology	CDS	2351395	2353083	.	+	0	ID=cds2113;Parent=gene2151;Dbxref=Genbank:WP_002211182.1;Name=WP_002211182.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;product=long-chain-fatty-acid--CoA ligase;protein_id=WP_002211182.1;transl_table=11
NC_017154.1	RefSeq	gene	2353243	2354364	.	+	.	ID=gene2152;Name=YPD4_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10805;old_locus_tag=YPD4_1835
NC_017154.1	Protein Homology	CDS	2353243	2354364	.	+	0	ID=cds2114;Parent=gene2152;Dbxref=Genbank:WP_002211181.1;Name=WP_002211181.1;gbkey=CDS;product=ribonuclease D;protein_id=WP_002211181.1;transl_table=11
NC_017154.1	RefSeq	gene	2354601	2354870	.	-	.	ID=gene2153;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=YPD4_RS10810
NC_017154.1	Protein Homology	CDS	2354601	2354870	.	-	0	ID=cds2115;Parent=gene2153;Dbxref=Genbank:WP_002211180.1;Name=WP_002211180.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_002211180.1;transl_table=11
NC_017154.1	RefSeq	gene	2354874	2355686	.	-	.	ID=gene2154;Name=YPD4_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10815;old_locus_tag=YPD4_1836
NC_017154.1	Protein Homology	CDS	2354874	2355686	.	-	0	ID=cds2116;Parent=gene2154;Dbxref=Genbank:WP_002211179.1;Name=WP_002211179.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_002211179.1;transl_table=11
NC_017154.1	RefSeq	gene	2355711	2356397	.	-	.	ID=gene2155;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=YPD4_RS10820;old_locus_tag=YPD4_1837
NC_017154.1	Protein Homology	CDS	2355711	2356397	.	-	0	ID=cds2117;Parent=gene2155;Dbxref=Genbank:WP_002220631.1;Name=WP_002220631.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum site-determining protein MinC;protein_id=WP_002220631.1;transl_table=11
NC_017154.1	RefSeq	gene	2357118	2357389	.	+	.	ID=gene2156;Name=YPD4_RS10825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10825;pseudo=true
NC_017154.1	Protein Homology	CDS	2357118	2357389	.	+	0	ID=cds2118;Parent=gene2156;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2357530	2358615	.	+	.	ID=gene2157;Name=YPD4_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10830;old_locus_tag=YPD4_1838
NC_017154.1	Protein Homology	CDS	2357530	2358615	.	+	0	ID=cds2119;Parent=gene2157;Dbxref=Genbank:WP_002215627.1;Name=WP_002215627.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215627.1;transl_table=11
NC_017154.1	RefSeq	gene	2358686	2359342	.	+	.	ID=gene2158;Name=YPD4_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10835;old_locus_tag=YPD4_1839
NC_017154.1	Protein Homology	CDS	2358686	2359342	.	+	0	ID=cds2120;Parent=gene2158;Dbxref=Genbank:WP_002211740.1;Name=WP_002211740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211740.1;transl_table=11
NC_017154.1	RefSeq	gene	2359445	2359891	.	+	.	ID=gene2159;Name=YPD4_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10840;old_locus_tag=YPD4_1840
NC_017154.1	Protein Homology	CDS	2359445	2359891	.	+	0	ID=cds2121;Parent=gene2159;Dbxref=Genbank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211739.1;transl_table=11
NC_017154.1	RefSeq	gene	2359918	2361156	.	-	.	ID=gene2160;Name=YPD4_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10845;old_locus_tag=YPD4_1841
NC_017154.1	Protein Homology	CDS	2359918	2361156	.	-	0	ID=cds2122;Parent=gene2160;Dbxref=Genbank:WP_002211738.1;Name=WP_002211738.1;gbkey=CDS;product=integrase;protein_id=WP_002211738.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2361137	2363095	.	+	.	ID=id174;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2361226	2362248	.	+	.	ID=gene2161;Name=YPD4_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10850;old_locus_tag=YPD4_1842
NC_017154.1	Protein Homology	CDS	2361226	2362248	.	+	0	ID=cds2123;Parent=gene2161;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	2362248	2363027	.	+	.	ID=gene2162;Name=YPD4_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10855;old_locus_tag=YPD4_1843
NC_017154.1	Protein Homology	CDS	2362248	2363027	.	+	0	ID=cds2124;Parent=gene2162;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	2363195	2363455	.	-	.	ID=gene2163;Name=YPD4_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10860
NC_017154.1	Protein Homology	CDS	2363195	2363455	.	-	0	ID=cds2125;Parent=gene2163;Dbxref=Genbank:WP_002215632.1;Name=WP_002215632.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002215632.1;transl_table=11
NC_017154.1	RefSeq	gene	2363755	2364453	.	-	.	ID=gene2164;Name=YPD4_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10865;old_locus_tag=YPD4_1844
NC_017154.1	Protein Homology	CDS	2363755	2364453	.	-	0	ID=cds2126;Parent=gene2164;Dbxref=Genbank:WP_002211737.1;Name=WP_002211737.1;gbkey=CDS;product=DNA methyltransferase;protein_id=WP_002211737.1;transl_table=11
NC_017154.1	RefSeq	gene	2364480	2364926	.	+	.	ID=gene2165;Name=YPD4_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10870;old_locus_tag=YPD4_1845
NC_017154.1	Protein Homology	CDS	2364480	2364926	.	+	0	ID=cds2127;Parent=gene2165;Dbxref=Genbank:WP_002211736.1;Name=WP_002211736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211736.1;transl_table=11
NC_017154.1	RefSeq	gene	2365000	2365584	.	+	.	ID=gene2166;Name=YPD4_RS10875;end_range=2365584,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS10875;old_locus_tag=YPD4_1846;partial=true;pseudo=true
NC_017154.1	Protein Homology	CDS	2365000	2365584	.	+	0	ID=cds2128;Parent=gene2166;end_range=2365584,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=protein ninG;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2365605	2365994	.	+	.	ID=gene2167;Name=YPD4_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10880
NC_017154.1	Protein Homology	CDS	2365605	2365994	.	+	0	ID=cds2129;Parent=gene2167;Dbxref=Genbank:WP_002215636.1;Name=WP_002215636.1;gbkey=CDS;product=antitermination protein;protein_id=WP_002215636.1;transl_table=11
NC_017154.1	RefSeq	gene	2365998	2366216	.	+	.	ID=gene2168;Name=YPD4_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10885
NC_017154.1	Protein Homology	CDS	2365998	2366216	.	+	0	ID=cds2130;Parent=gene2168;Dbxref=Genbank:WP_002215638.1;Name=WP_002215638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215638.1;transl_table=11
NC_017154.1	RefSeq	gene	2366265	2366828	.	+	.	ID=gene2169;Name=YPD4_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10890;old_locus_tag=YPD4_1847
NC_017154.1	Protein Homology	CDS	2366265	2366828	.	+	0	ID=cds2131;Parent=gene2169;Dbxref=Genbank:WP_002211732.1;Name=WP_002211732.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211732.1;transl_table=11
NC_017154.1	RefSeq	gene	2366913	2367089	.	-	.	ID=gene2170;Name=YPD4_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10895
NC_017154.1	Protein Homology	CDS	2366913	2367089	.	-	0	ID=cds2132;Parent=gene2170;Dbxref=Genbank:WP_002393183.1;Name=WP_002393183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002393183.1;transl_table=11
NC_017154.1	RefSeq	gene	2367252	2367461	.	+	.	ID=gene2171;Name=YPD4_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10900
NC_017154.1	Protein Homology	CDS	2367252	2367461	.	+	0	ID=cds2133;Parent=gene2171;Dbxref=Genbank:WP_002211731.1;Name=WP_002211731.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211731.1;transl_table=11
NC_017154.1	RefSeq	gene	2367458	2367733	.	-	.	ID=gene2172;Name=YPD4_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10905
NC_017154.1	Protein Homology	CDS	2367458	2367733	.	-	0	ID=cds2134;Parent=gene2172;Dbxref=Genbank:WP_002215644.1;Name=WP_002215644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215644.1;transl_table=11
NC_017154.1	RefSeq	gene	2367979	2368176	.	+	.	ID=gene2173;Name=YPD4_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10910
NC_017154.1	Protein Homology	CDS	2367979	2368176	.	+	0	ID=cds2135;Parent=gene2173;Dbxref=Genbank:WP_002430108.1;Name=WP_002430108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430108.1;transl_table=11
NC_017154.1	RefSeq	gene	2368207	2368719	.	+	.	ID=gene2174;Name=YPD4_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10915;old_locus_tag=YPD4_1848
NC_017154.1	Protein Homology	CDS	2368207	2368719	.	+	0	ID=cds2136;Parent=gene2174;Dbxref=Genbank:WP_002211730.1;Name=WP_002211730.1;gbkey=CDS;product=glycoside hydrolase;protein_id=WP_002211730.1;transl_table=11
NC_017154.1	RefSeq	gene	2368704	2369162	.	+	.	ID=gene2175;Name=YPD4_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10920;old_locus_tag=YPD4_1849
NC_017154.1	Protein Homology	CDS	2368704	2369162	.	+	0	ID=cds2137;Parent=gene2175;Dbxref=Genbank:WP_002211729.1;Name=WP_002211729.1;gbkey=CDS;product=endopeptidase;protein_id=WP_002211729.1;transl_table=11
NC_017154.1	RefSeq	gene	2369708	2370421	.	+	.	ID=gene2176;Name=YPD4_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10925;old_locus_tag=YPD4_1850
NC_017154.1	Protein Homology	CDS	2369708	2370421	.	+	0	ID=cds2138;Parent=gene2176;Dbxref=Genbank:WP_002211727.1;Name=WP_002211727.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211727.1;transl_table=11
NC_017154.1	RefSeq	gene	2370878	2371513	.	+	.	ID=gene2177;Name=YPD4_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10930;old_locus_tag=YPD4_1851
NC_017154.1	Protein Homology	CDS	2370878	2371513	.	+	0	ID=cds2139;Parent=gene2177;Dbxref=Genbank:WP_002211725.1;Name=WP_002211725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211725.1;transl_table=11
NC_017154.1	RefSeq	gene	2371544	2371993	.	+	.	ID=gene2178;Name=YPD4_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10935;old_locus_tag=YPD4_1852
NC_017154.1	Protein Homology	CDS	2371544	2371993	.	+	0	ID=cds2140;Parent=gene2178;Dbxref=Genbank:WP_002211724.1;Name=WP_002211724.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211724.1;transl_table=11
NC_017154.1	RefSeq	gene	2372003	2372581	.	+	.	ID=gene2179;Name=YPD4_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10940
NC_017154.1	Protein Homology	CDS	2372003	2372581	.	+	0	ID=cds2141;Parent=gene2179;Dbxref=Genbank:WP_002215656.1;Name=WP_002215656.1;gbkey=CDS;product=terminase large subunit;protein_id=WP_002215656.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2372556	2373875	.	+	.	ID=id175;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2372629	2373837	.	+	.	ID=gene2180;Name=YPD4_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10945;old_locus_tag=YPD4_1854
NC_017154.1	Protein Homology	CDS	2372629	2373837	.	+	0	ID=cds2142;Parent=gene2180;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	2373842	2374816	.	+	.	ID=gene2181;Name=YPD4_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10950;old_locus_tag=YPD4_1855
NC_017154.1	Protein Homology	CDS	2373842	2374816	.	+	0	ID=cds2143;Parent=gene2181;Dbxref=Genbank:WP_002211722.1;Name=WP_002211722.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211722.1;transl_table=11
NC_017154.1	RefSeq	gene	2374816	2375544	.	+	.	ID=gene2182;Name=YPD4_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10955;old_locus_tag=YPD4_1856
NC_017154.1	Protein Homology	CDS	2374816	2375544	.	+	0	ID=cds2144;Parent=gene2182;Dbxref=Genbank:WP_002228445.1;Name=WP_002228445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228445.1;transl_table=11
NC_017154.1	RefSeq	gene	2375563	2376204	.	+	.	ID=gene2183;Name=YPD4_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10960;old_locus_tag=YPD4_1857
NC_017154.1	Protein Homology	CDS	2375563	2376204	.	+	0	ID=cds2145;Parent=gene2183;Dbxref=Genbank:WP_002228446.1;Name=WP_002228446.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228446.1;transl_table=11
NC_017154.1	RefSeq	gene	2376205	2377317	.	+	.	ID=gene2184;Name=YPD4_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10965;old_locus_tag=YPD4_1858
NC_017154.1	Protein Homology	CDS	2376205	2377317	.	+	0	ID=cds2146;Parent=gene2184;Dbxref=Genbank:WP_002211721.1;Name=WP_002211721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211721.1;transl_table=11
NC_017154.1	RefSeq	gene	2377439	2378212	.	+	.	ID=gene2185;Name=YPD4_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10970;old_locus_tag=YPD4_1859
NC_017154.1	Protein Homology	CDS	2377439	2378212	.	+	0	ID=cds2147;Parent=gene2185;Dbxref=Genbank:WP_002211720.1;Name=WP_002211720.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211720.1;transl_table=11
NC_017154.1	RefSeq	gene	2378226	2379431	.	+	.	ID=gene2186;Name=YPD4_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10975;old_locus_tag=YPD4_1860
NC_017154.1	Protein Homology	CDS	2378226	2379431	.	+	0	ID=cds2148;Parent=gene2186;Dbxref=Genbank:WP_002211719.1;Name=WP_002211719.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211719.1;transl_table=11
NC_017154.1	RefSeq	gene	2379479	2379961	.	+	.	ID=gene2187;Name=YPD4_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10980;old_locus_tag=YPD4_1861
NC_017154.1	Protein Homology	CDS	2379479	2379961	.	+	0	ID=cds2149;Parent=gene2187;Dbxref=Genbank:WP_002211718.1;Name=WP_002211718.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211718.1;transl_table=11
NC_017154.1	RefSeq	gene	2379958	2380212	.	+	.	ID=gene2188;Name=YPD4_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10985
NC_017154.1	Protein Homology	CDS	2379958	2380212	.	+	0	ID=cds2150;Parent=gene2188;Dbxref=Genbank:WP_002211717.1;Name=WP_002211717.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211717.1;transl_table=11
NC_017154.1	RefSeq	gene	2380214	2380564	.	+	.	ID=gene2189;Name=YPD4_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10990;old_locus_tag=YPD4_1862
NC_017154.1	Protein Homology	CDS	2380214	2380564	.	+	0	ID=cds2151;Parent=gene2189;Dbxref=Genbank:WP_002211716.1;Name=WP_002211716.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211716.1;transl_table=11
NC_017154.1	RefSeq	gene	2380566	2381150	.	+	.	ID=gene2190;Name=YPD4_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS10995;old_locus_tag=YPD4_1863
NC_017154.1	Protein Homology	CDS	2380566	2381150	.	+	0	ID=cds2152;Parent=gene2190;Dbxref=Genbank:WP_002211715.1;Name=WP_002211715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211715.1;transl_table=11
NC_017154.1	RefSeq	gene	2381147	2381554	.	+	.	ID=gene2191;Name=YPD4_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11000;old_locus_tag=YPD4_1864
NC_017154.1	Protein Homology	CDS	2381147	2381554	.	+	0	ID=cds2153;Parent=gene2191;Dbxref=Genbank:WP_002211714.1;Name=WP_002211714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211714.1;transl_table=11
NC_017154.1	RefSeq	gene	2381620	2382540	.	+	.	ID=gene2192;Name=YPD4_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11005;old_locus_tag=YPD4_1865
NC_017154.1	Protein Homology	CDS	2381620	2382540	.	+	0	ID=cds2154;Parent=gene2192;Dbxref=Genbank:WP_002211713.1;Name=WP_002211713.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211713.1;transl_table=11
NC_017154.1	RefSeq	gene	2382553	2382864	.	+	.	ID=gene2193;Name=YPD4_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11010;old_locus_tag=YPD4_1866
NC_017154.1	Protein Homology	CDS	2382553	2382864	.	+	0	ID=cds2155;Parent=gene2193;Dbxref=Genbank:WP_002211712.1;Name=WP_002211712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211712.1;transl_table=11
NC_017154.1	RefSeq	gene	2382951	2383172	.	+	.	ID=gene2194;Name=YPD4_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11015
NC_017154.1	Protein Homology	CDS	2382951	2383172	.	+	0	ID=cds2156;Parent=gene2194;Dbxref=Genbank:WP_002214476.1;Name=WP_002214476.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214476.1;transl_table=11
NC_017154.1	RefSeq	gene	2383173	2386676	.	+	.	ID=gene2195;Name=YPD4_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11020;old_locus_tag=YPD4_1867
NC_017154.1	Protein Homology	CDS	2383173	2386676	.	+	0	ID=cds2157;Parent=gene2195;Dbxref=Genbank:WP_002211711.1;Name=WP_002211711.1;gbkey=CDS;product=tail protein;protein_id=WP_002211711.1;transl_table=11
NC_017154.1	RefSeq	gene	2386679	2387020	.	+	.	ID=gene2196;Name=YPD4_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11025;old_locus_tag=YPD4_1868
NC_017154.1	Protein Homology	CDS	2386679	2387020	.	+	0	ID=cds2158;Parent=gene2196;Dbxref=Genbank:WP_002211710.1;Name=WP_002211710.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211710.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2387173	2387897	.	+	.	ID=id176;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2387180	2387335	.	+	.	ID=gene2197;Name=YPD4_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11030
NC_017154.1	Protein Homology	CDS	2387180	2387335	.	+	0	ID=cds2159;Parent=gene2197;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	2387325	2387783	.	+	.	ID=gene2198;Name=YPD4_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11035;old_locus_tag=YPD4_1869
NC_017154.1	Protein Homology	CDS	2387325	2387783	.	+	0	ID=cds2160;Parent=gene2198;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	2387904	2388656	.	+	.	ID=gene2199;Name=YPD4_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11040;old_locus_tag=YPD4_1870
NC_017154.1	Protein Homology	CDS	2387904	2388656	.	+	0	ID=cds2161;Parent=gene2199;Dbxref=Genbank:WP_002211709.1;Name=WP_002211709.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211709.1;transl_table=11
NC_017154.1	RefSeq	gene	2388659	2389369	.	+	.	ID=gene2200;Name=YPD4_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11045;old_locus_tag=YPD4_1871
NC_017154.1	Protein Homology	CDS	2388659	2389369	.	+	0	ID=cds2162;Parent=gene2200;Dbxref=Genbank:WP_002211708.1;Name=WP_002211708.1;gbkey=CDS;product=peptidase P60;protein_id=WP_002211708.1;transl_table=11
NC_017154.1	RefSeq	gene	2389630	2390262	.	+	.	ID=gene2201;Name=YPD4_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11050;old_locus_tag=YPD4_1872
NC_017154.1	Protein Homology	CDS	2389630	2390262	.	+	0	ID=cds2163;Parent=gene2201;Dbxref=Genbank:WP_002211707.1;Name=WP_002211707.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211707.1;transl_table=11
NC_017154.1	RefSeq	gene	2390341	2390772	.	-	.	ID=gene2202;Name=YPD4_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11055
NC_017154.1	Protein Homology	CDS	2390341	2390772	.	-	0	ID=cds2164;Parent=gene2202;Dbxref=Genbank:WP_002211706.1;Name=WP_002211706.1;gbkey=CDS;product=Rha family transcriptional regulator;protein_id=WP_002211706.1;transl_table=11
NC_017154.1	RefSeq	gene	2390896	2391063	.	+	.	ID=gene2203;Name=YPD4_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11060
NC_017154.1	Protein Homology	CDS	2390896	2391063	.	+	0	ID=cds2165;Parent=gene2203;Dbxref=Genbank:WP_002211705.1;Name=WP_002211705.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211705.1;transl_table=11
NC_017154.1	RefSeq	gene	2391137	2392144	.	+	.	ID=gene2204;Name=YPD4_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11065;old_locus_tag=YPD4_1873
NC_017154.1	Protein Homology	CDS	2391137	2392144	.	+	0	ID=cds2166;Parent=gene2204;Dbxref=Genbank:WP_002211704.1;Name=WP_002211704.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211704.1;transl_table=11
NC_017154.1	RefSeq	gene	2392243	2392794	.	+	.	ID=gene2205;Name=YPD4_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11070
NC_017154.1	Protein Homology	CDS	2392243	2392794	.	+	0	ID=cds2167;Parent=gene2205;Dbxref=Genbank:WP_002214482.1;Name=WP_002214482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214482.1;transl_table=11
NC_017154.1	RefSeq	gene	2392937	2393152	.	+	.	ID=gene2206;Name=YPD4_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11075
NC_017154.1	Protein Homology	CDS	2392937	2393152	.	+	0	ID=cds2168;Parent=gene2206;Dbxref=Genbank:WP_002211701.1;Name=WP_002211701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211701.1;transl_table=11
NC_017154.1	RefSeq	gene	2393208	2393828	.	+	.	ID=gene2207;Name=YPD4_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11080
NC_017154.1	Protein Homology	CDS	2393208	2393828	.	+	0	ID=cds2169;Parent=gene2207;Dbxref=Genbank:WP_002211700.1;Name=WP_002211700.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211700.1;transl_table=11
NC_017154.1	RefSeq	gene	2393870	2394034	.	+	.	ID=gene2208;Name=YPD4_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11085
NC_017154.1	Protein Homology	CDS	2393870	2394034	.	+	0	ID=cds2170;Parent=gene2208;Dbxref=Genbank:WP_002211699.1;Name=WP_002211699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211699.1;transl_table=11
NC_017154.1	RefSeq	gene	2394003	2394224	.	-	.	ID=gene2209;Name=YPD4_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11090
NC_017154.1	Protein Homology	CDS	2394003	2394224	.	-	0	ID=cds2171;Parent=gene2209;Dbxref=Genbank:WP_002359202.1;Name=WP_002359202.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002359202.1;transl_table=11
NC_017154.1	RefSeq	gene	2394400	2397603	.	+	.	ID=gene2210;Name=YPD4_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11095;old_locus_tag=YPD4_1874
NC_017154.1	Protein Homology	CDS	2394400	2397603	.	+	0	ID=cds2172;Parent=gene2210;Dbxref=Genbank:WP_002211698.1;Name=WP_002211698.1;gbkey=CDS;product=host specificity protein;protein_id=WP_002211698.1;transl_table=11
NC_017154.1	RefSeq	gene	2397603	2398601	.	+	.	ID=gene2211;Name=YPD4_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11100;old_locus_tag=YPD4_1875
NC_017154.1	Protein Homology	CDS	2397603	2398601	.	+	0	ID=cds2173;Parent=gene2211;Dbxref=Genbank:WP_002211697.1;Name=WP_002211697.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211697.1;transl_table=11
NC_017154.1	RefSeq	gene	2398618	2399535	.	+	.	ID=gene2212;Name=YPD4_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11105;old_locus_tag=YPD4_1876
NC_017154.1	Protein Homology	CDS	2398618	2399535	.	+	0	ID=cds2174;Parent=gene2212;Dbxref=Genbank:WP_002211696.1;Name=WP_002211696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211696.1;transl_table=11
NC_017154.1	RefSeq	gene	2399546	2399965	.	+	.	ID=gene2213;Name=YPD4_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11110;old_locus_tag=YPD4_1877
NC_017154.1	Protein Homology	CDS	2399546	2399965	.	+	0	ID=cds2175;Parent=gene2213;Dbxref=Genbank:WP_002211695.1;Name=WP_002211695.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_002211695.1;transl_table=11
NC_017154.1	RefSeq	gene	2399962	2400117	.	+	.	ID=gene2214;Name=YPD4_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11115
NC_017154.1	Protein Homology	CDS	2399962	2400117	.	+	0	ID=cds2176;Parent=gene2214;Dbxref=Genbank:WP_002211694.1;Name=WP_002211694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211694.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2400148	2401469	.	+	.	ID=id177;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2400186	2401394	.	-	.	ID=gene2215;Name=YPD4_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11120;old_locus_tag=YPD4_1878
NC_017154.1	Protein Homology	CDS	2400186	2401394	.	-	0	ID=cds2177;Parent=gene2215;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	2401699	2402871	.	-	.	ID=gene2216;Name=YPD4_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11125;old_locus_tag=YPD4_1879
NC_017154.1	Protein Homology	CDS	2401699	2402871	.	-	0	ID=cds2178;Parent=gene2216;Dbxref=Genbank:WP_002214492.1;Name=WP_002214492.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002214492.1;transl_table=11
NC_017154.1	RefSeq	gene	2402875	2404074	.	-	.	ID=gene2217;Name=YPD4_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11130;old_locus_tag=YPD4_1880
NC_017154.1	Protein Homology	CDS	2402875	2404074	.	-	0	ID=cds2179;Parent=gene2217;Dbxref=Genbank:WP_002211693.1;Name=WP_002211693.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=aminotransferase;protein_id=WP_002211693.1;transl_table=11
NC_017154.1	RefSeq	gene	2404091	2404831	.	-	.	ID=gene2218;Name=YPD4_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11135;old_locus_tag=YPD4_1881
NC_017154.1	Protein Homology	CDS	2404091	2404831	.	-	0	ID=cds2180;Parent=gene2218;Dbxref=Genbank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11
NC_017154.1	RefSeq	gene	2405923	2406279	.	+	.	ID=gene2219;Name=YPD4_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11140;old_locus_tag=YPD4_1882
NC_017154.1	Protein Homology	CDS	2405923	2406279	.	+	0	ID=cds2181;Parent=gene2219;Dbxref=Genbank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11
NC_017154.1	RefSeq	gene	2406696	2407226	.	-	.	ID=gene2220;Name=YPD4_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11145;old_locus_tag=YPD4_1883
NC_017154.1	Protein Homology	CDS	2406696	2407226	.	-	0	ID=cds2182;Parent=gene2220;Dbxref=Genbank:WP_002227934.1;Name=WP_002227934.1;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_002227934.1;transl_table=11
NC_017154.1	RefSeq	gene	2407462	2409036	.	-	.	ID=gene2221;Name=YPD4_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11150;old_locus_tag=YPD4_1884
NC_017154.1	Protein Homology	CDS	2407462	2409036	.	-	0	ID=cds2183;Parent=gene2221;Dbxref=Genbank:WP_002211689.1;Name=WP_002211689.1;gbkey=CDS;product=Na+/H+ antiporter NhaB;protein_id=WP_002211689.1;transl_table=11
NC_017154.1	RefSeq	gene	2409280	2409999	.	+	.	ID=gene2222;Name=YPD4_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11155;old_locus_tag=YPD4_1885
NC_017154.1	Protein Homology	CDS	2409280	2409999	.	+	0	ID=cds2184;Parent=gene2222;Dbxref=Genbank:WP_002211688.1;Name=WP_002211688.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator protein;protein_id=WP_002211688.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2410038	2410170	.	+	.	ID=id178;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2410217	2411752	.	-	.	ID=gene2223;Name=YPD4_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11160;old_locus_tag=YPD4_1886
NC_017154.1	Protein Homology	CDS	2410217	2411752	.	-	0	ID=cds2185;Parent=gene2223;Dbxref=Genbank:WP_002211687.1;Name=WP_002211687.1;gbkey=CDS;product=SpoVR family protein;protein_id=WP_002211687.1;transl_table=11
NC_017154.1	RefSeq	gene	2412217	2413521	.	+	.	ID=gene2224;Name=YPD4_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11165;old_locus_tag=YPD4_1887
NC_017154.1	Protein Homology	CDS	2412217	2413521	.	+	0	ID=cds2186;Parent=gene2224;Dbxref=Genbank:WP_002211686.1;Name=WP_002211686.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=D-amino acid dehydrogenase;protein_id=WP_002211686.1;transl_table=11
NC_017154.1	RefSeq	gene	2413537	2414739	.	-	.	ID=gene2225;Name=YPD4_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11170;old_locus_tag=YPD4_1888
NC_017154.1	Protein Homology	CDS	2413537	2414739	.	-	0	ID=cds2187;Parent=gene2225;Dbxref=Genbank:WP_002216508.1;Name=WP_002216508.1;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002216508.1;transl_table=11
NC_017154.1	RefSeq	gene	2415004	2415873	.	-	.	ID=gene2226;Name=YPD4_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11175;old_locus_tag=YPD4_1889
NC_017154.1	Protein Homology	CDS	2415004	2415873	.	-	0	ID=cds2188;Parent=gene2226;Dbxref=Genbank:WP_002211685.1;Name=WP_002211685.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002211685.1;transl_table=11
NC_017154.1	RefSeq	gene	2416071	2416976	.	+	.	ID=gene2227;Name=YPD4_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11180;old_locus_tag=YPD4_1890
NC_017154.1	Protein Homology	CDS	2416071	2416976	.	+	0	ID=cds2189;Parent=gene2227;Dbxref=Genbank:WP_002211684.1;Name=WP_002211684.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211684.1;transl_table=11
NC_017154.1	RefSeq	gene	2417011	2418129	.	-	.	ID=gene2228;Name=YPD4_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11185;old_locus_tag=YPD4_1891
NC_017154.1	Protein Homology	CDS	2417011	2418129	.	-	0	ID=cds2190;Parent=gene2228;Dbxref=Genbank:WP_002211683.1;Name=WP_002211683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211683.1;transl_table=11
NC_017154.1	RefSeq	gene	2418237	2419511	.	-	.	ID=gene2229;Name=YPD4_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11190;old_locus_tag=YPD4_1892
NC_017154.1	Protein Homology	CDS	2418237	2419511	.	-	0	ID=cds2191;Parent=gene2229;Dbxref=Genbank:WP_002216501.1;Name=WP_002216501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216501.1;transl_table=11
NC_017154.1	RefSeq	gene	2419661	2421595	.	-	.	ID=gene2230;Name=YPD4_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11195;old_locus_tag=YPD4_1893
NC_017154.1	Protein Homology	CDS	2419661	2421595	.	-	0	ID=cds2192;Parent=gene2230;Dbxref=Genbank:WP_002211681.1;Name=WP_002211681.1;gbkey=CDS;product=PrkA family serine protein kinase;protein_id=WP_002211681.1;transl_table=11
NC_017154.1	RefSeq	gene	2422018	2422788	.	+	.	ID=gene2231;Name=YPD4_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11200;old_locus_tag=YPD4_1894
NC_017154.1	Protein Homology	CDS	2422018	2422788	.	+	0	ID=cds2193;Parent=gene2231;Dbxref=Genbank:WP_002211680.1;Name=WP_002211680.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein MipA;protein_id=WP_002211680.1;transl_table=11
NC_017154.1	RefSeq	gene	2422861	2423737	.	-	.	ID=gene2232;Name=YPD4_RS11205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS11205;old_locus_tag=YPD4_1895;pseudo=true
NC_017154.1	Protein Homology	CDS	2422861	2423737	.	-	0	ID=cds2194;Parent=gene2232;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glucose-6-phosphate 1-epimerase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2424051	2425046	.	-	.	ID=gene2233;Name=YPD4_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11210;old_locus_tag=YPD4_1896
NC_017154.1	Protein Homology	CDS	2424051	2425046	.	-	0	ID=cds2195;Parent=gene2233;Dbxref=Genbank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11
NC_017154.1	RefSeq	gene	2425394	2425807	.	+	.	ID=gene2234;Name=YPD4_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11215;old_locus_tag=YPD4_1897
NC_017154.1	Protein Homology	CDS	2425394	2425807	.	+	0	ID=cds2196;Parent=gene2234;Dbxref=Genbank:WP_002211677.1;Name=WP_002211677.1;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11
NC_017154.1	RefSeq	gene	2425878	2426150	.	+	.	ID=gene2235;Name=YPD4_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11220
NC_017154.1	Protein Homology	CDS	2425878	2426150	.	+	0	ID=cds2197;Parent=gene2235;Dbxref=Genbank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217933.1;transl_table=11
NC_017154.1	RefSeq	gene	2426284	2426931	.	-	.	ID=gene2236;Name=YPD4_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11225;old_locus_tag=YPD4_1899
NC_017154.1	Protein Homology	CDS	2426284	2426931	.	-	0	ID=cds2198;Parent=gene2236;Dbxref=Genbank:WP_002211676.1;Name=WP_002211676.1;gbkey=CDS;product=nicotinamidase/pyrazinamidase;protein_id=WP_002211676.1;transl_table=11
NC_017154.1	RefSeq	gene	2426946	2427962	.	-	.	ID=gene2237;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=YPD4_RS11230;old_locus_tag=YPD4_1900
NC_017154.1	Protein Homology	CDS	2426946	2427962	.	-	0	ID=cds2199;Parent=gene2237;Dbxref=Genbank:WP_002211675.1;Name=WP_002211675.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=WP_002211675.1;transl_table=11
NC_017154.1	RefSeq	gene	2428079	2429930	.	-	.	ID=gene2238;Name=YPD4_RS11235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS11235;old_locus_tag=YPD4_1901;pseudo=true
NC_017154.1	Protein Homology	CDS	2428079	2429930	.	-	0	ID=cds2200;Parent=gene2238;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;product=protease 4;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2430093	2430644	.	+	.	ID=gene2239;Name=YPD4_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11240;old_locus_tag=YPD4_1902
NC_017154.1	Protein Homology	CDS	2430093	2430644	.	+	0	ID=cds2201;Parent=gene2239;Dbxref=Genbank:WP_015683944.1;Name=WP_015683944.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_015683944.1;transl_table=11
NC_017154.1	RefSeq	gene	2430869	2431915	.	+	.	ID=gene2240;Name=YPD4_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11245;old_locus_tag=YPD4_1903
NC_017154.1	Protein Homology	CDS	2430869	2431915	.	+	0	ID=cds2202;Parent=gene2240;Dbxref=Genbank:WP_002211671.1;Name=WP_002211671.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;product=selenophosphate synthase;protein_id=WP_002211671.1;transl_table=11
NC_017154.1	RefSeq	gene	2431977	2433902	.	+	.	ID=gene2241;Name=YPD4_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11250;old_locus_tag=YPD4_1904
NC_017154.1	Protein Homology	CDS	2431977	2433902	.	+	0	ID=cds2203;Parent=gene2241;Dbxref=Genbank:WP_002211670.1;Name=WP_002211670.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_002211670.1;transl_table=11
NC_017154.1	RefSeq	gene	2433899	2434189	.	+	.	ID=gene2242;Name=YPD4_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11255
NC_017154.1	Protein Homology	CDS	2433899	2434189	.	+	0	ID=cds2204;Parent=gene2242;Dbxref=Genbank:WP_002211669.1;Name=WP_002211669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211669.1;transl_table=11
NC_017154.1	RefSeq	gene	2434202	2434588	.	-	.	ID=gene2243;Name=YPD4_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11260;old_locus_tag=YPD4_1905
NC_017154.1	Protein Homology	CDS	2434202	2434588	.	-	0	ID=cds2205;Parent=gene2243;Dbxref=Genbank:WP_002211668.1;Name=WP_002211668.1;gbkey=CDS;product=pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002211668.1;transl_table=11
NC_017154.1	RefSeq	gene	2434686	2435492	.	-	.	ID=gene2244;Name=YPD4_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11265;old_locus_tag=YPD4_1906
NC_017154.1	Protein Homology	CDS	2434686	2435492	.	-	0	ID=cds2206;Parent=gene2244;Dbxref=Genbank:WP_002211667.1;Name=WP_002211667.1;gbkey=CDS;product=exonuclease III;protein_id=WP_002211667.1;transl_table=11
NC_017154.1	RefSeq	gene	2436302	2437162	.	+	.	ID=gene2245;Name=YPD4_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11270;old_locus_tag=YPD4_1907
NC_017154.1	Protein Homology	CDS	2436302	2437162	.	+	0	ID=cds2207;Parent=gene2245;Dbxref=Genbank:WP_015683945.1;Name=WP_015683945.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_015683945.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2437224	2437688	.	+	.	ID=id179;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2437670	2437754	.	-	.	ID=gene2246;Name=YPD4_RS11275;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS11275;old_locus_tag=YPD4_t31
NC_017154.1	tRNAscan-SE	tRNA	2437670	2437754	.	-	.	ID=rna36;Parent=gene2246;anticodon=(pos:complement(2437718..2437720));gbkey=tRNA;product=tRNA-Tyr
NC_017154.1	tRNAscan-SE	exon	2437670	2437754	.	-	.	ID=id180;Parent=rna36;anticodon=(pos:complement(2437718..2437720));gbkey=tRNA;product=tRNA-Tyr
NC_017154.1	RefSeq	repeat_region	2437961	2439280	.	+	.	ID=id181;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2438034	2439242	.	+	.	ID=gene2247;Name=YPD4_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11280;old_locus_tag=YPD4_1908
NC_017154.1	Protein Homology	CDS	2438034	2439242	.	+	0	ID=cds2208;Parent=gene2247;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	2439205	2440074	.	-	.	ID=gene2248;Name=YPD4_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11285;old_locus_tag=YPD4_1909
NC_017154.1	Protein Homology	CDS	2439205	2440074	.	-	0	ID=cds2209;Parent=gene2248;Dbxref=Genbank:WP_002210667.1;Name=WP_002210667.1;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=WP_002210667.1;transl_table=11
NC_017154.1	RefSeq	gene	2440158	2440622	.	-	.	ID=gene2249;Name=YPD4_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11290;old_locus_tag=YPD4_1910
NC_017154.1	Protein Homology	CDS	2440158	2440622	.	-	0	ID=cds2210;Parent=gene2249;Dbxref=Genbank:WP_002210666.1;Name=WP_002210666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210666.1;transl_table=11
NC_017154.1	RefSeq	gene	2441956	2442972	.	+	.	ID=gene2250;Name=YPD4_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11295;old_locus_tag=YPD4_1911
NC_017154.1	Protein Homology	CDS	2441956	2442972	.	+	0	ID=cds2211;Parent=gene2250;Dbxref=Genbank:WP_002210665.1;Name=WP_002210665.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210665.1;transl_table=11
NC_017154.1	RefSeq	gene	2443279	2444625	.	+	.	ID=gene2251;Name=YPD4_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11300;old_locus_tag=YPD4_1912
NC_017154.1	Protein Homology	CDS	2443279	2444625	.	+	0	ID=cds2212;Parent=gene2251;Dbxref=Genbank:WP_002210664.1;Name=WP_002210664.1;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=WP_002210664.1;transl_table=11
NC_017154.1	RefSeq	gene	2445060	2445458	.	-	.	ID=gene2252;Name=YPD4_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11305;old_locus_tag=YPD4_1913
NC_017154.1	Protein Homology	CDS	2445060	2445458	.	-	0	ID=cds2213;Parent=gene2252;Dbxref=Genbank:WP_002210661.1;Name=WP_002210661.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210661.1;transl_table=11
NC_017154.1	RefSeq	gene	2446208	2446798	.	+	.	ID=gene2253;Name=YPD4_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11310;old_locus_tag=YPD4_1914
NC_017154.1	Protein Homology	CDS	2446208	2446798	.	+	0	ID=cds2214;Parent=gene2253;Dbxref=Genbank:WP_002210659.1;Name=WP_002210659.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2447097	2449060	.	+	.	ID=id182;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2447167	2447829	.	-	.	ID=gene2254;Name=YPD4_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11315;old_locus_tag=YPD4_1915
NC_017154.1	Protein Homology	CDS	2447167	2447829	.	-	0	ID=cds2215;Parent=gene2254;Dbxref=Genbank:WP_001343784.1;Name=WP_001343784.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_001343784.1;transl_table=11
NC_017154.1	RefSeq	gene	2447945	2448967	.	-	.	ID=gene2255;Name=YPD4_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11320;old_locus_tag=YPD4_1916
NC_017154.1	Protein Homology	CDS	2447945	2448967	.	-	0	ID=cds2216;Parent=gene2255;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	2449507	2452181	.	-	.	ID=gene2256;Name=YPD4_RS11325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS11325;pseudo=true
NC_017154.1	Protein Homology	CDS	2449507	2452181	.	-	0	ID=cds2217;Parent=gene2256;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acetaldehyde dehydrogenase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2452988	2453632	.	+	.	ID=gene2257;Name=YPD4_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11330;old_locus_tag=YPD4_1919
NC_017154.1	Protein Homology	CDS	2452988	2453632	.	+	0	ID=cds2218;Parent=gene2257;Dbxref=Genbank:WP_002210656.1;Name=WP_002210656.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210656.1;transl_table=11
NC_017154.1	RefSeq	gene	2454470	2456107	.	+	.	ID=gene2258;Name=YPD4_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11335;old_locus_tag=YPD4_1920
NC_017154.1	Protein Homology	CDS	2454470	2456107	.	+	0	ID=cds2219;Parent=gene2258;Dbxref=Genbank:WP_002218177.1;Name=WP_002218177.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002218177.1;transl_table=11
NC_017154.1	RefSeq	gene	2456194	2457114	.	+	.	ID=gene2259;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=YPD4_RS11340;old_locus_tag=YPD4_1921
NC_017154.1	Protein Homology	CDS	2456194	2457114	.	+	0	ID=cds2220;Parent=gene2259;Dbxref=Genbank:WP_002210654.1;Name=WP_002210654.1;gbkey=CDS;gene=oppB;product=peptide ABC transporter permease;protein_id=WP_002210654.1;transl_table=11
NC_017154.1	RefSeq	gene	2457130	2458038	.	+	.	ID=gene2260;Name=YPD4_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11345;old_locus_tag=YPD4_1922
NC_017154.1	Protein Homology	CDS	2457130	2458038	.	+	0	ID=cds2221;Parent=gene2260;Dbxref=Genbank:WP_025470761.1;Name=WP_025470761.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025470761.1;transl_table=11
NC_017154.1	RefSeq	gene	2458050	2459051	.	+	.	ID=gene2261;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=YPD4_RS11350;old_locus_tag=YPD4_1923
NC_017154.1	Protein Homology	CDS	2458050	2459051	.	+	0	ID=cds2222;Parent=gene2261;Dbxref=Genbank:WP_015683948.1;Name=WP_015683948.1;gbkey=CDS;gene=oppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_015683948.1;transl_table=11
NC_017154.1	RefSeq	gene	2459048	2460049	.	+	.	ID=gene2262;Name=YPD4_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11355;old_locus_tag=YPD4_1924
NC_017154.1	Protein Homology	CDS	2459048	2460049	.	+	0	ID=cds2223;Parent=gene2262;Dbxref=Genbank:WP_002210651.1;Name=WP_002210651.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210651.1;transl_table=11
NC_017154.1	RefSeq	gene	2460098	2460313	.	-	.	ID=gene2263;Name=YPD4_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11360
NC_017154.1	GeneMarkS+	CDS	2460098	2460313	.	-	0	ID=cds2224;Parent=gene2263;Dbxref=Genbank:WP_015683825.1;Name=WP_015683825.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683825.1;transl_table=11
NC_017154.1	RefSeq	gene	2460610	2460825	.	+	.	ID=gene2264;Name=YPD4_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11365
NC_017154.1	Protein Homology	CDS	2460610	2460825	.	+	0	ID=cds2225;Parent=gene2264;Dbxref=Genbank:WP_002210650.1;Name=WP_002210650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210650.1;transl_table=11
NC_017154.1	RefSeq	gene	2461124	2461447	.	-	.	ID=gene2265;Name=YPD4_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11370;old_locus_tag=YPD4_1925
NC_017154.1	Protein Homology	CDS	2461124	2461447	.	-	0	ID=cds2226;Parent=gene2265;Dbxref=Genbank:WP_002210649.1;Name=WP_002210649.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11
NC_017154.1	RefSeq	gene	2461612	2463072	.	-	.	ID=gene2266;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=YPD4_RS11375;old_locus_tag=YPD4_1926
NC_017154.1	Protein Homology	CDS	2461612	2463072	.	-	0	ID=cds2227;Parent=gene2266;Dbxref=Genbank:WP_002210648.1;Name=WP_002210648.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_002210648.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2463207	2463381	.	+	.	ID=id183;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2464118	2464657	.	+	.	ID=gene2267;Name=YPD4_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11380;old_locus_tag=YPD4_1927
NC_017154.1	Protein Homology	CDS	2464118	2464657	.	+	0	ID=cds2228;Parent=gene2267;Dbxref=Genbank:WP_002210646.1;Name=WP_002210646.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002210646.1;transl_table=11
NC_017154.1	RefSeq	gene	2464878	2465141	.	+	.	ID=gene2268;Name=YPD4_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11385
NC_017154.1	Protein Homology	CDS	2464878	2465141	.	+	0	ID=cds2229;Parent=gene2268;Dbxref=Genbank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11
NC_017154.1	RefSeq	gene	2465257	2465502	.	-	.	ID=gene2269;Name=YPD4_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11390
NC_017154.1	Protein Homology	CDS	2465257	2465502	.	-	0	ID=cds2230;Parent=gene2269;Dbxref=Genbank:WP_002217646.1;Name=WP_002217646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217646.1;transl_table=11
NC_017154.1	RefSeq	gene	2465725	2466021	.	-	.	ID=gene2270;Name=YPD4_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11395
NC_017154.1	Protein Homology	CDS	2465725	2466021	.	-	0	ID=cds2231;Parent=gene2270;Dbxref=Genbank:WP_002210643.1;Name=WP_002210643.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210643.1;transl_table=11
NC_017154.1	RefSeq	gene	2466322	2467080	.	+	.	ID=gene2271;Name=YPD4_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11400;old_locus_tag=YPD4_1928
NC_017154.1	Protein Homology	CDS	2466322	2467080	.	+	0	ID=cds2232;Parent=gene2271;Dbxref=Genbank:WP_002210642.1;Name=WP_002210642.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002210642.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2467079	2468398	.	+	.	ID=id184;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2467116	2468324	.	-	.	ID=gene2272;Name=YPD4_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11405;old_locus_tag=YPD4_1929
NC_017154.1	Protein Homology	CDS	2467116	2468324	.	-	0	ID=cds2233;Parent=gene2272;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	2468472	2468921	.	-	.	ID=gene2273;Name=YPD4_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11410;old_locus_tag=YPD4_1930
NC_017154.1	Protein Homology	CDS	2468472	2468921	.	-	0	ID=cds2234;Parent=gene2273;Dbxref=Genbank:WP_002210641.1;Name=WP_002210641.1;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210641.1;transl_table=11
NC_017154.1	RefSeq	gene	2469001	2469543	.	-	.	ID=gene2274;Name=YPD4_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11415;old_locus_tag=YPD4_1931
NC_017154.1	Protein Homology	CDS	2469001	2469543	.	-	0	ID=cds2235;Parent=gene2274;Dbxref=Genbank:WP_002210640.1;Name=WP_002210640.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_002210640.1;transl_table=11
NC_017154.1	RefSeq	gene	2469774	2470073	.	+	.	ID=gene2275;Name=YPD4_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11420
NC_017154.1	GeneMarkS+	CDS	2469774	2470073	.	+	0	ID=cds2236;Parent=gene2275;Dbxref=Genbank:WP_044023359.1;Name=WP_044023359.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_044023359.1;transl_table=11
NC_017154.1	RefSeq	gene	2470099	2470857	.	+	.	ID=gene2276;Name=YPD4_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11425;old_locus_tag=YPD4_1932
NC_017154.1	Protein Homology	CDS	2470099	2470857	.	+	0	ID=cds2237;Parent=gene2276;Dbxref=Genbank:WP_015683949.1;Name=WP_015683949.1;gbkey=CDS;product=sulfate transporter;protein_id=WP_015683949.1;transl_table=11
NC_017154.1	RefSeq	gene	2470889	2471509	.	+	.	ID=gene2277;Name=YPD4_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11430;old_locus_tag=YPD4_1933
NC_017154.1	Protein Homology	CDS	2470889	2471509	.	+	0	ID=cds2238;Parent=gene2277;Dbxref=Genbank:WP_002215979.1;Name=WP_002215979.1;gbkey=CDS;product=sulfate permease;protein_id=WP_002215979.1;transl_table=11
NC_017154.1	RefSeq	gene	2471630	2472400	.	-	.	ID=gene2278;Name=YPD4_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11435;old_locus_tag=YPD4_1934
NC_017154.1	Protein Homology	CDS	2471630	2472400	.	-	0	ID=cds2239;Parent=gene2278;Dbxref=Genbank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210639.1;transl_table=11
NC_017154.1	RefSeq	gene	2472562	2472777	.	+	.	ID=gene2279;Name=YPD4_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11440
NC_017154.1	Protein Homology	CDS	2472562	2472777	.	+	0	ID=cds2240;Parent=gene2279;Dbxref=Genbank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11
NC_017154.1	RefSeq	gene	2472874	2473521	.	+	.	ID=gene2280;Name=YPD4_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11445;old_locus_tag=YPD4_1935
NC_017154.1	Protein Homology	CDS	2472874	2473521	.	+	0	ID=cds2241;Parent=gene2280;Dbxref=Genbank:WP_011055515.1;Name=WP_011055515.1;Note=receptor for colicin S4;gbkey=CDS;product=outer membrane protein W;protein_id=WP_011055515.1;transl_table=11
NC_017154.1	RefSeq	gene	2473668	2473982	.	-	.	ID=gene2281;Name=YPD4_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11450;old_locus_tag=YPD4_1936
NC_017154.1	Protein Homology	CDS	2473668	2473982	.	-	0	ID=cds2242;Parent=gene2281;Dbxref=Genbank:WP_002210636.1;Name=WP_002210636.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210636.1;transl_table=11
NC_017154.1	RefSeq	gene	2474325	2475131	.	-	.	ID=gene2282;Name=YPD4_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11455;old_locus_tag=YPD4_1937
NC_017154.1	Protein Homology	CDS	2474325	2475131	.	-	0	ID=cds2243;Parent=gene2282;Dbxref=Genbank:WP_002210634.1;Name=WP_002210634.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_002210634.1;transl_table=11
NC_017154.1	RefSeq	gene	2475131	2476321	.	-	.	ID=gene2283;Name=YPD4_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11460;old_locus_tag=YPD4_1938
NC_017154.1	Protein Homology	CDS	2475131	2476321	.	-	0	ID=cds2244;Parent=gene2283;Dbxref=Genbank:WP_002210633.1;Name=WP_002210633.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11
NC_017154.1	RefSeq	gene	2476478	2477905	.	-	.	ID=gene2284;Name=YPD4_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11465;old_locus_tag=YPD4_1939
NC_017154.1	Protein Homology	CDS	2476478	2477905	.	-	0	ID=cds2245;Parent=gene2284;Dbxref=Genbank:WP_002210632.1;Name=WP_002210632.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;product=tryptophan biosynthesis protein TrpCF;protein_id=WP_002210632.1;transl_table=11
NC_017154.1	RefSeq	gene	2477909	2478907	.	-	.	ID=gene2285;Name=YPD4_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11470;old_locus_tag=YPD4_1940
NC_017154.1	Protein Homology	CDS	2477909	2478907	.	-	0	ID=cds2246;Parent=gene2285;Dbxref=Genbank:WP_002215980.1;Name=WP_002215980.1;gbkey=CDS;product=anthranilate phosphoribosyltransferase;protein_id=WP_002215980.1;transl_table=11
NC_017154.1	RefSeq	gene	2478922	2479500	.	-	.	ID=gene2286;Name=YPD4_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11475;old_locus_tag=YPD4_1941
NC_017154.1	Protein Homology	CDS	2478922	2479500	.	-	0	ID=cds2247;Parent=gene2286;Dbxref=Genbank:WP_002215981.1;Name=WP_002215981.1;gbkey=CDS;product=Anthranilate synthase component 2;protein_id=WP_002215981.1;transl_table=11
NC_017154.1	RefSeq	gene	2479500	2481062	.	-	.	ID=gene2287;Name=YPD4_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11480;old_locus_tag=YPD4_1942
NC_017154.1	Protein Homology	CDS	2479500	2481062	.	-	0	ID=cds2248;Parent=gene2287;Dbxref=Genbank:WP_002228454.1;Name=WP_002228454.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;product=anthranilate synthase subunit I;protein_id=WP_002228454.1;transl_table=11
NC_017154.1	RefSeq	gene	2481181	2481243	.	-	.	ID=gene2288;Name=YPD4_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11485
NC_017154.1	Protein Homology	CDS	2481181	2481243	.	-	0	ID=cds2249;Parent=gene2288;Dbxref=Genbank:WP_002227930.1;Name=WP_002227930.1;gbkey=CDS;product=trp operon leader peptide;protein_id=WP_002227930.1;transl_table=11
NC_017154.1	RefSeq	gene	2481272	2481400	.	-	.	ID=gene2289;Name=YPD4_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11490
NC_017154.1	Protein Homology	CDS	2481272	2481400	.	-	0	ID=cds2250;Parent=gene2289;Dbxref=Genbank:WP_002215982.1;Name=WP_002215982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215982.1;transl_table=11
NC_017154.1	RefSeq	gene	2481481	2482416	.	+	.	ID=gene2290;Name=YPD4_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11495;old_locus_tag=YPD4_1943
NC_017154.1	Protein Homology	CDS	2481481	2482416	.	+	0	ID=cds2251;Parent=gene2290;Dbxref=Genbank:WP_002210629.1;Name=WP_002210629.1;gbkey=CDS;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=WP_002210629.1;transl_table=11
NC_017154.1	RefSeq	gene	2482433	2483053	.	+	.	ID=gene2291;Name=YPD4_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11500;old_locus_tag=YPD4_1944
NC_017154.1	Protein Homology	CDS	2482433	2483053	.	+	0	ID=cds2252;Parent=gene2291;Dbxref=Genbank:WP_002210628.1;Name=WP_002210628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210628.1;transl_table=11
NC_017154.1	RefSeq	gene	2483400	2484434	.	+	.	ID=gene2292;Name=YPD4_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11505;old_locus_tag=YPD4_1945
NC_017154.1	Protein Homology	CDS	2483400	2484434	.	+	0	ID=cds2253;Parent=gene2292;Dbxref=Genbank:WP_002210627.1;Name=WP_002210627.1;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=WP_002210627.1;transl_table=11
NC_017154.1	RefSeq	gene	2484557	2485147	.	-	.	ID=gene2293;Name=YPD4_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11510;old_locus_tag=YPD4_1946
NC_017154.1	Protein Homology	CDS	2484557	2485147	.	-	0	ID=cds2254;Parent=gene2293;Dbxref=Genbank:WP_002210626.1;Name=WP_002210626.1;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;gbkey=CDS;product=cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase;protein_id=WP_002210626.1;transl_table=11
NC_017154.1	RefSeq	gene	2485164	2485925	.	-	.	ID=gene2294;Name=YPD4_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11515;old_locus_tag=YPD4_1947
NC_017154.1	Protein Homology	CDS	2485164	2485925	.	-	0	ID=cds2255;Parent=gene2294;Dbxref=Genbank:WP_002210625.1;Name=WP_002210625.1;gbkey=CDS;product=oxoacyl-ACP reductase;protein_id=WP_002210625.1;transl_table=11
NC_017154.1	RefSeq	gene	2486097	2487143	.	+	.	ID=gene2295;Name=YPD4_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11520;old_locus_tag=YPD4_1948
NC_017154.1	Protein Homology	CDS	2486097	2487143	.	+	0	ID=cds2256;Parent=gene2295;Dbxref=Genbank:WP_002210624.1;Name=WP_002210624.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=peptidase;protein_id=WP_002210624.1;transl_table=11
NC_017154.1	RefSeq	gene	2487262	2487513	.	-	.	ID=gene2296;Name=YPD4_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11525
NC_017154.1	Protein Homology	CDS	2487262	2487513	.	-	0	ID=cds2257;Parent=gene2296;Dbxref=Genbank:WP_002210623.1;Name=WP_002210623.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210623.1;transl_table=11
NC_017154.1	RefSeq	gene	2487606	2487905	.	+	.	ID=gene2297;Name=YPD4_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11530
NC_017154.1	Protein Homology	CDS	2487606	2487905	.	+	0	ID=cds2258;Parent=gene2297;Dbxref=Genbank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11
NC_017154.1	RefSeq	gene	2487932	2490547	.	+	.	ID=gene2298;Name=YPD4_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11535;old_locus_tag=YPD4_1949
NC_017154.1	Protein Homology	CDS	2487932	2490547	.	+	0	ID=cds2259;Parent=gene2298;Dbxref=Genbank:WP_002210622.1;Name=WP_002210622.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_002210622.1;transl_table=11
NC_017154.1	RefSeq	gene	2490944	2491918	.	+	.	ID=gene2299;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=YPD4_RS11540;old_locus_tag=YPD4_1950
NC_017154.1	Protein Homology	CDS	2490944	2491918	.	+	0	ID=cds2260;Parent=gene2299;Dbxref=Genbank:WP_002210621.1;Name=WP_002210621.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=CysB family transcriptional regulator;protein_id=WP_002210621.1;transl_table=11
NC_017154.1	RefSeq	gene	2492254	2493111	.	+	.	ID=gene2300;Name=YPD4_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11545;old_locus_tag=YPD4_1951
NC_017154.1	Protein Homology	CDS	2492254	2493111	.	+	0	ID=cds2261;Parent=gene2300;Dbxref=Genbank:WP_002210620.1;Name=WP_002210620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210620.1;transl_table=11
NC_017154.1	RefSeq	gene	2493475	2496147	.	+	.	ID=gene2301;Name=YPD4_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11550;old_locus_tag=YPD4_1952
NC_017154.1	Protein Homology	CDS	2493475	2496147	.	+	0	ID=cds2262;Parent=gene2301;Dbxref=Genbank:WP_002215187.1;Name=WP_002215187.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;product=aconitate hydratase;protein_id=WP_002215187.1;transl_table=11
NC_017154.1	RefSeq	gene	2496311	2496901	.	-	.	ID=gene2302;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=YPD4_RS11555;old_locus_tag=YPD4_1953
NC_017154.1	Protein Homology	CDS	2496311	2496901	.	-	0	ID=cds2263;Parent=gene2302;Dbxref=Genbank:WP_002227926.1;Name=WP_002227926.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase-2;protein_id=WP_002227926.1;transl_table=11
NC_017154.1	RefSeq	gene	2497407	2498168	.	+	.	ID=gene2303;Name=YPD4_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11560;old_locus_tag=YPD4_1954
NC_017154.1	Protein Homology	CDS	2497407	2498168	.	+	0	ID=cds2264;Parent=gene2303;Dbxref=Genbank:WP_002210617.1;Name=WP_002210617.1;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=WP_002210617.1;transl_table=11
NC_017154.1	RefSeq	gene	2498337	2498648	.	+	.	ID=gene2304;Name=YPD4_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11565;old_locus_tag=YPD4_1955
NC_017154.1	Protein Homology	CDS	2498337	2498648	.	+	0	ID=cds2265;Parent=gene2304;Dbxref=Genbank:WP_002210616.1;Name=WP_002210616.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210616.1;transl_table=11
NC_017154.1	RefSeq	gene	2498655	2499823	.	+	.	ID=gene2305;Name=YPD4_RS11570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS11570;old_locus_tag=YPD4_1956;pseudo=true
NC_017154.1	Protein Homology	CDS	2498655	2499823	.	+	0	ID=cds2266;Parent=gene2305;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2499945	2500244	.	-	.	ID=gene2306;Name=YPD4_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11575
NC_017154.1	Protein Homology	CDS	2499945	2500244	.	-	0	ID=cds2267;Parent=gene2306;Dbxref=Genbank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11
NC_017154.1	RefSeq	gene	2500714	2501451	.	+	.	ID=gene2307;Name=YPD4_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11580;old_locus_tag=YPD4_1957
NC_017154.1	Protein Homology	CDS	2500714	2501451	.	+	0	ID=cds2268;Parent=gene2307;Dbxref=Genbank:WP_002210613.1;Name=WP_002210613.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_002210613.1;transl_table=11
NC_017154.1	RefSeq	gene	2501451	2501777	.	+	.	ID=gene2308;Name=YPD4_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11585;old_locus_tag=YPD4_1958
NC_017154.1	Protein Homology	CDS	2501451	2501777	.	+	0	ID=cds2269;Parent=gene2308;Dbxref=Genbank:WP_002210612.1;Name=WP_002210612.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;product=translation initiation factor Sui1;protein_id=WP_002210612.1;transl_table=11
NC_017154.1	RefSeq	gene	2502015	2502230	.	-	.	ID=gene2309;Name=YPD4_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11590
NC_017154.1	Protein Homology	CDS	2502015	2502230	.	-	0	ID=cds2270;Parent=gene2309;Dbxref=Genbank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210611.1;transl_table=11
NC_017154.1	RefSeq	gene	2502710	2503405	.	+	.	ID=gene2310;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPD4_RS11595;old_locus_tag=YPD4_1959
NC_017154.1	Protein Homology	CDS	2502710	2503405	.	+	0	ID=cds2271;Parent=gene2310;Dbxref=Genbank:WP_002210610.1;Name=WP_002210610.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002210610.1;transl_table=11
NC_017154.1	RefSeq	gene	2503434	2503682	.	-	.	ID=gene2311;Name=YPD4_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11600
NC_017154.1	Protein Homology	CDS	2503434	2503682	.	-	0	ID=cds2272;Parent=gene2311;Dbxref=Genbank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210609.1;transl_table=11
NC_017154.1	RefSeq	gene	2504016	2504681	.	+	.	ID=gene2312;Name=YPD4_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11605;old_locus_tag=YPD4_1960
NC_017154.1	Protein Homology	CDS	2504016	2504681	.	+	0	ID=cds2273;Parent=gene2312;Dbxref=Genbank:WP_002215192.1;Name=WP_002215192.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=WP_002215192.1;transl_table=11
NC_017154.1	RefSeq	gene	2504798	2505103	.	-	.	ID=gene2313;Name=YPD4_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11610;old_locus_tag=YPD4_1961
NC_017154.1	Protein Homology	CDS	2504798	2505103	.	-	0	ID=cds2274;Parent=gene2313;Dbxref=Genbank:WP_002210607.1;Name=WP_002210607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210607.1;transl_table=11
NC_017154.1	RefSeq	gene	2505096	2507162	.	-	.	ID=gene2314;Name=YPD4_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11615;old_locus_tag=YPD4_1962
NC_017154.1	Protein Homology	CDS	2505096	2507162	.	-	0	ID=cds2275;Parent=gene2314;Dbxref=Genbank:WP_002220371.1;Name=WP_002220371.1;gbkey=CDS;product=carbon starvation protein A;protein_id=WP_002220371.1;transl_table=11
NC_017154.1	RefSeq	gene	2507512	2509446	.	-	.	ID=gene2315;Name=YPD4_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11620;old_locus_tag=YPD4_1963
NC_017154.1	Protein Homology	CDS	2507512	2509446	.	-	0	ID=cds2276;Parent=gene2315;Dbxref=Genbank:WP_002210605.1;Name=WP_002210605.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease 2;protein_id=WP_002210605.1;transl_table=11
NC_017154.1	RefSeq	gene	2510105	2511415	.	+	.	ID=gene2316;Name=YPD4_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11625;old_locus_tag=YPD4_1964
NC_017154.1	Protein Homology	CDS	2510105	2511415	.	+	0	ID=cds2277;Parent=gene2316;Dbxref=Genbank:WP_002210604.1;Name=WP_002210604.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210604.1;transl_table=11
NC_017154.1	RefSeq	gene	2511453	2512451	.	+	.	ID=gene2317;Name=YPD4_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11630;old_locus_tag=YPD4_1965
NC_017154.1	Protein Homology	CDS	2511453	2512451	.	+	0	ID=cds2278;Parent=gene2317;Dbxref=Genbank:WP_002210603.1;Name=WP_002210603.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210603.1;transl_table=11
NC_017154.1	RefSeq	gene	2512634	2513275	.	-	.	ID=gene2318;Name=YPD4_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11635;old_locus_tag=YPD4_1966
NC_017154.1	Protein Homology	CDS	2512634	2513275	.	-	0	ID=cds2279;Parent=gene2318;Dbxref=Genbank:WP_002210602.1;Name=WP_002210602.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11
NC_017154.1	RefSeq	gene	2513272	2513973	.	-	.	ID=gene2319;Name=YPD4_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11640;old_locus_tag=YPD4_1967
NC_017154.1	Protein Homology	CDS	2513272	2513973	.	-	0	ID=cds2280;Parent=gene2319;Dbxref=Genbank:WP_002210601.1;Name=WP_002210601.1;gbkey=CDS;product=electron transport complex subunit E;protein_id=WP_002210601.1;transl_table=11
NC_017154.1	RefSeq	gene	2513970	2514599	.	-	.	ID=gene2320;Name=YPD4_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11645;old_locus_tag=YPD4_1968
NC_017154.1	Protein Homology	CDS	2513970	2514599	.	-	0	ID=cds2281;Parent=gene2320;Dbxref=Genbank:WP_002210600.1;Name=WP_002210600.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit G;protein_id=WP_002210600.1;transl_table=11
NC_017154.1	RefSeq	gene	2514609	2515703	.	-	.	ID=gene2321;Name=YPD4_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11650;old_locus_tag=YPD4_1969
NC_017154.1	Protein Homology	CDS	2514609	2515703	.	-	0	ID=cds2282;Parent=gene2321;Dbxref=Genbank:WP_002210599.1;Name=WP_002210599.1;gbkey=CDS;product=electron transporter RnfG;protein_id=WP_002210599.1;transl_table=11
NC_017154.1	RefSeq	gene	2516192	2517085	.	+	.	ID=gene2322;Name=YPD4_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11655;old_locus_tag=YPD4_1970
NC_017154.1	Protein Homology	CDS	2516192	2517085	.	+	0	ID=cds2283;Parent=gene2322;Dbxref=Genbank:WP_002210598.1;Name=WP_002210598.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210598.1;transl_table=11
NC_017154.1	RefSeq	gene	2517190	2519052	.	-	.	ID=gene2323;Name=YPD4_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11660;old_locus_tag=YPD4_1971
NC_017154.1	Protein Homology	CDS	2517190	2519052	.	-	0	ID=cds2284;Parent=gene2323;Dbxref=Genbank:WP_002210597.1;Name=WP_002210597.1;gbkey=CDS;product=electron transport complex subunit C;protein_id=WP_002210597.1;transl_table=11
NC_017154.1	RefSeq	gene	2519102	2519668	.	-	.	ID=gene2324;Name=YPD4_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11665;old_locus_tag=YPD4_1972
NC_017154.1	Protein Homology	CDS	2519102	2519668	.	-	0	ID=cds2285;Parent=gene2324;Dbxref=Genbank:WP_002210596.1;Name=WP_002210596.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit B;protein_id=WP_002210596.1;transl_table=11
NC_017154.1	RefSeq	gene	2519668	2520249	.	-	.	ID=gene2325;Name=YPD4_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11670;old_locus_tag=YPD4_1973
NC_017154.1	Protein Homology	CDS	2519668	2520249	.	-	0	ID=cds2286;Parent=gene2325;Dbxref=Genbank:WP_002210595.1;Name=WP_002210595.1;gbkey=CDS;product=electron transport complex subunit A;protein_id=WP_002210595.1;transl_table=11
NC_017154.1	RefSeq	gene	2520377	2520820	.	-	.	ID=gene2326;Name=YPD4_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11675;old_locus_tag=YPD4_1974
NC_017154.1	Protein Homology	CDS	2520377	2520820	.	-	0	ID=cds2287;Parent=gene2326;Dbxref=Genbank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210594.1;transl_table=11
NC_017154.1	RefSeq	gene	2521295	2523079	.	+	.	ID=gene2327;Name=YPD4_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11680;old_locus_tag=YPD4_1975
NC_017154.1	Protein Homology	CDS	2521295	2523079	.	+	0	ID=cds2288;Parent=gene2327;Dbxref=Genbank:WP_002215879.1;Name=WP_002215879.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002215879.1;transl_table=11
NC_017154.1	RefSeq	gene	2523132	2523353	.	+	.	ID=gene2328;Name=YPD4_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11685
NC_017154.1	GeneMarkS+	CDS	2523132	2523353	.	+	0	ID=cds2289;Parent=gene2328;Dbxref=Genbank:WP_002215880.1;Name=WP_002215880.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215880.1;transl_table=11
NC_017154.1	RefSeq	gene	2523378	2524379	.	+	.	ID=gene2329;Name=YPD4_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11690;old_locus_tag=YPD4_1976
NC_017154.1	Protein Homology	CDS	2523378	2524379	.	+	0	ID=cds2290;Parent=gene2329;Dbxref=Genbank:WP_002215881.1;Name=WP_002215881.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002215881.1;transl_table=11
NC_017154.1	RefSeq	gene	2524379	2524747	.	+	.	ID=gene2330;Name=YPD4_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11695;old_locus_tag=YPD4_1977
NC_017154.1	Protein Homology	CDS	2524379	2524747	.	+	0	ID=cds2291;Parent=gene2330;Dbxref=Genbank:WP_002215882.1;Name=WP_002215882.1;gbkey=CDS;product=hemolysin D;protein_id=WP_002215882.1;transl_table=11
NC_017154.1	RefSeq	gene	2524749	2526887	.	+	.	ID=gene2331;Name=YPD4_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11700;old_locus_tag=YPD4_1978
NC_017154.1	Protein Homology	CDS	2524749	2526887	.	+	0	ID=cds2292;Parent=gene2331;Dbxref=Genbank:WP_002210593.1;Name=WP_002210593.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002210593.1;transl_table=11
NC_017154.1	RefSeq	gene	2527077	2528579	.	-	.	ID=gene2332;Name=YPD4_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11705;old_locus_tag=YPD4_1979
NC_017154.1	Protein Homology	CDS	2527077	2528579	.	-	0	ID=cds2293;Parent=gene2332;Dbxref=Genbank:WP_002210591.1;Name=WP_002210591.1;gbkey=CDS;product=L-arabinose isomerase;protein_id=WP_002210591.1;transl_table=11
NC_017154.1	RefSeq	gene	2528663	2530366	.	-	.	ID=gene2333;Name=YPD4_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11710;old_locus_tag=YPD4_1980
NC_017154.1	Protein Homology	CDS	2528663	2530366	.	-	0	ID=cds2294;Parent=gene2333;Dbxref=Genbank:WP_002210590.1;Name=WP_002210590.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;product=ribulokinase;protein_id=WP_002210590.1;transl_table=11
NC_017154.1	RefSeq	gene	2530774	2531757	.	+	.	ID=gene2334;Name=YPD4_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11715;old_locus_tag=YPD4_1981
NC_017154.1	Protein Homology	CDS	2530774	2531757	.	+	0	ID=cds2295;Parent=gene2334;Dbxref=Genbank:WP_002210589.1;Name=WP_002210589.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002210589.1;transl_table=11
NC_017154.1	RefSeq	gene	2531855	2533426	.	+	.	ID=gene2335;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=YPD4_RS11720;old_locus_tag=YPD4_1982
NC_017154.1	Protein Homology	CDS	2531855	2533426	.	+	0	ID=cds2296;Parent=gene2335;Dbxref=Genbank:WP_002210588.1;Name=WP_002210588.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=arabinose import ATP-binding protein AraG;protein_id=WP_002210588.1;transl_table=11
NC_017154.1	RefSeq	gene	2533444	2534493	.	+	.	ID=gene2336;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=YPD4_RS11725;old_locus_tag=YPD4_1983
NC_017154.1	Protein Homology	CDS	2533444	2534493	.	+	0	ID=cds2297;Parent=gene2336;Dbxref=Genbank:WP_002210587.1;Name=WP_002210587.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=arabinose ABC transporter permease;protein_id=WP_002210587.1;transl_table=11
NC_017154.1	RefSeq	gene	2534714	2535646	.	+	.	ID=gene2337;Name=YPD4_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11730;old_locus_tag=YPD4_1984
NC_017154.1	Protein Homology	CDS	2534714	2535646	.	+	0	ID=cds2298;Parent=gene2337;Dbxref=Genbank:WP_002210586.1;Name=WP_002210586.1;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210586.1;transl_table=11
NC_017154.1	RefSeq	gene	2535774	2536823	.	+	.	ID=gene2338;Name=YPD4_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11735;old_locus_tag=YPD4_1985
NC_017154.1	Protein Homology	CDS	2535774	2536823	.	+	0	ID=cds2299;Parent=gene2338;Dbxref=Genbank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11
NC_017154.1	RefSeq	gene	2537017	2538046	.	+	.	ID=gene2339;Name=YPD4_RS11740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS11740;old_locus_tag=YPD4_1986;pseudo=true
NC_017154.1	Protein Homology	CDS	2537017	2538046	.	+	0	ID=cds2300;Parent=gene2339;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2538252	2538851	.	+	.	ID=gene2340;Name=YPD4_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11745;old_locus_tag=YPD4_1987
NC_017154.1	Protein Homology	CDS	2538252	2538851	.	+	0	ID=cds2301;Parent=gene2340;Dbxref=Genbank:WP_002210583.1;Name=WP_002210583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210583.1;transl_table=11
NC_017154.1	RefSeq	gene	2538900	2540444	.	-	.	ID=gene2341;Name=YPD4_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11750;old_locus_tag=YPD4_1988
NC_017154.1	Protein Homology	CDS	2538900	2540444	.	-	0	ID=cds2302;Parent=gene2341;Dbxref=Genbank:WP_002216605.1;Name=WP_002216605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216605.1;transl_table=11
NC_017154.1	RefSeq	gene	2540684	2541859	.	-	.	ID=gene2342;Name=YPD4_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11755;old_locus_tag=YPD4_1989
NC_017154.1	Protein Homology	CDS	2540684	2541859	.	-	0	ID=cds2303;Parent=gene2342;Dbxref=Genbank:WP_002210579.1;Name=WP_002210579.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_002210579.1;transl_table=11
NC_017154.1	RefSeq	gene	2542143	2543540	.	+	.	ID=gene2343;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=YPD4_RS11760;old_locus_tag=YPD4_1990
NC_017154.1	Protein Homology	CDS	2542143	2543540	.	+	0	ID=cds2304;Parent=gene2343;Dbxref=Genbank:WP_002210578.1;Name=WP_002210578.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase class II;protein_id=WP_002210578.1;transl_table=11
NC_017154.1	RefSeq	gene	2543620	2544555	.	-	.	ID=gene2344;Name=YPD4_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11765;old_locus_tag=YPD4_1991
NC_017154.1	Protein Homology	CDS	2543620	2544555	.	-	0	ID=cds2305;Parent=gene2344;Dbxref=Genbank:WP_002227921.1;Name=WP_002227921.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_002227921.1;transl_table=11
NC_017154.1	RefSeq	gene	2544760	2546057	.	-	.	ID=gene2345;Name=YPD4_RS11770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS11770;pseudo=true
NC_017154.1	Protein Homology	CDS	2544760	2546057	.	-	0	ID=cds2306;Parent=gene2345;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2544940..2544942)%2Caa:Other);transl_table=11
NC_017154.1	RefSeq	gene	2546270	2547148	.	+	.	ID=gene2346;Name=YPD4_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11775;old_locus_tag=YPD4_1993
NC_017154.1	Protein Homology	CDS	2546270	2547148	.	+	0	ID=cds2307;Parent=gene2346;Dbxref=Genbank:WP_002220360.1;Name=WP_002220360.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220360.1;transl_table=11
NC_017154.1	RefSeq	gene	2547362	2548579	.	+	.	ID=gene2347;Name=YPD4_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11780;old_locus_tag=YPD4_1994
NC_017154.1	Protein Homology	CDS	2547362	2548579	.	+	0	ID=cds2308;Parent=gene2347;Dbxref=Genbank:WP_002210576.1;Name=WP_002210576.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210576.1;transl_table=11
NC_017154.1	RefSeq	gene	2548803	2549471	.	+	.	ID=gene2348;Name=YPD4_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11785;old_locus_tag=YPD4_1995
NC_017154.1	Protein Homology	CDS	2548803	2549471	.	+	0	ID=cds2309;Parent=gene2348;Dbxref=Genbank:WP_002210575.1;Name=WP_002210575.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002210575.1;transl_table=11
NC_017154.1	RefSeq	gene	2549594	2550874	.	-	.	ID=gene2349;Name=YPD4_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11790;old_locus_tag=YPD4_1996
NC_017154.1	Protein Homology	CDS	2549594	2550874	.	-	0	ID=cds2310;Parent=gene2349;Dbxref=Genbank:WP_002210574.1;Name=WP_002210574.1;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_002210574.1;transl_table=11
NC_017154.1	RefSeq	gene	2551242	2551352	.	-	.	ID=gene2350;Name=YPD4_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11795
NC_017154.1	Protein Homology	CDS	2551242	2551352	.	-	0	ID=cds2311;Parent=gene2350;Dbxref=Genbank:WP_002214514.1;Name=WP_002214514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214514.1;transl_table=11
NC_017154.1	RefSeq	gene	2551474	2552490	.	-	.	ID=gene2351;Name=YPD4_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11800;old_locus_tag=YPD4_1997
NC_017154.1	Protein Homology	CDS	2551474	2552490	.	-	0	ID=cds2312;Parent=gene2351;Dbxref=Genbank:WP_002211038.1;Name=WP_002211038.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211038.1;transl_table=11
NC_017154.1	RefSeq	gene	2552554	2553024	.	-	.	ID=gene2352;Name=YPD4_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11805;old_locus_tag=YPD4_1998
NC_017154.1	Protein Homology	CDS	2552554	2553024	.	-	0	ID=cds2313;Parent=gene2352;Dbxref=Genbank:WP_002211037.1;Name=WP_002211037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211037.1;transl_table=11
NC_017154.1	RefSeq	gene	2553168	2553518	.	-	.	ID=gene2353;Name=YPD4_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11810;old_locus_tag=YPD4_1999
NC_017154.1	Protein Homology	CDS	2553168	2553518	.	-	0	ID=cds2314;Parent=gene2353;Dbxref=Genbank:WP_002211036.1;Name=WP_002211036.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211036.1;transl_table=11
NC_017154.1	RefSeq	gene	2553957	2554988	.	+	.	ID=gene2354;Name=YPD4_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11815;old_locus_tag=YPD4_2000
NC_017154.1	Protein Homology	CDS	2553957	2554988	.	+	0	ID=cds2315;Parent=gene2354;Dbxref=Genbank:WP_044023361.1;Name=WP_044023361.1;gbkey=CDS;product=myristoyl transferase;protein_id=WP_044023361.1;transl_table=11
NC_017154.1	RefSeq	gene	2554992	2555813	.	+	.	ID=gene2355;Name=YPD4_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11820;old_locus_tag=YPD4_2001
NC_017154.1	Protein Homology	CDS	2554992	2555813	.	+	0	ID=cds2316;Parent=gene2355;Dbxref=Genbank:WP_002211034.1;Name=WP_002211034.1;gbkey=CDS;product=sulfonate ABC transporter permease;protein_id=WP_002211034.1;transl_table=11
NC_017154.1	RefSeq	gene	2556104	2557744	.	-	.	ID=gene2356;Name=YPD4_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11825;old_locus_tag=YPD4_2002
NC_017154.1	Protein Homology	CDS	2556104	2557744	.	-	0	ID=cds2317;Parent=gene2356;Dbxref=Genbank:WP_002211033.1;Name=WP_002211033.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;product=AMP nucleosidase;protein_id=WP_002211033.1;transl_table=11
NC_017154.1	RefSeq	gene	2557950	2559383	.	+	.	ID=gene2357;Name=YPD4_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11830;old_locus_tag=YPD4_2003
NC_017154.1	Protein Homology	CDS	2557950	2559383	.	+	0	ID=cds2318;Parent=gene2357;Dbxref=Genbank:WP_002211031.1;Name=WP_002211031.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211031.1;transl_table=11
NC_017154.1	RefSeq	gene	2559388	2562459	.	+	.	ID=gene2358;Name=YPD4_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11835;old_locus_tag=YPD4_2004
NC_017154.1	Protein Homology	CDS	2559388	2562459	.	+	0	ID=cds2319;Parent=gene2358;Dbxref=Genbank:WP_002211030.1;Name=WP_002211030.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211030.1;transl_table=11
NC_017154.1	RefSeq	gene	2562456	2564996	.	+	.	ID=gene2359;Name=YPD4_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11840;old_locus_tag=YPD4_2005
NC_017154.1	Protein Homology	CDS	2562456	2564996	.	+	0	ID=cds2320;Parent=gene2359;Dbxref=Genbank:WP_002211029.1;Name=WP_002211029.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211029.1;transl_table=11
NC_017154.1	RefSeq	gene	2565165	2565959	.	-	.	ID=gene2360;Name=YPD4_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11845;old_locus_tag=YPD4_2006
NC_017154.1	Protein Homology	CDS	2565165	2565959	.	-	0	ID=cds2321;Parent=gene2360;Dbxref=Genbank:WP_002220345.1;Name=WP_002220345.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220345.1;transl_table=11
NC_017154.1	RefSeq	gene	2566568	2568235	.	+	.	ID=gene2361;Name=YPD4_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11850;old_locus_tag=YPD4_2007
NC_017154.1	Protein Homology	CDS	2566568	2568235	.	+	0	ID=cds2322;Parent=gene2361;Dbxref=Genbank:WP_002211027.1;Name=WP_002211027.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002211027.1;transl_table=11
NC_017154.1	RefSeq	gene	2568237	2568539	.	+	.	ID=gene2362;Name=YPD4_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11855;old_locus_tag=YPD4_2008
NC_017154.1	Protein Homology	CDS	2568237	2568539	.	+	0	ID=cds2323;Parent=gene2362;Dbxref=Genbank:WP_002211026.1;Name=WP_002211026.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002211026.1;transl_table=11
NC_017154.1	RefSeq	gene	2568606	2569280	.	-	.	ID=gene2363;Name=YPD4_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11860;old_locus_tag=YPD4_2009
NC_017154.1	Protein Homology	CDS	2568606	2569280	.	-	0	ID=cds2324;Parent=gene2363;Dbxref=Genbank:WP_002211025.1;Name=WP_002211025.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;product=dUMP phosphatase;protein_id=WP_002211025.1;transl_table=11
NC_017154.1	RefSeq	gene	2569411	2570796	.	-	.	ID=gene2364;Name=YPD4_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11865;old_locus_tag=YPD4_2010
NC_017154.1	Protein Homology	CDS	2569411	2570796	.	-	0	ID=cds2325;Parent=gene2364;Dbxref=Genbank:WP_002227914.1;Name=WP_002227914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227914.1;transl_table=11
NC_017154.1	RefSeq	gene	2570796	2571806	.	-	.	ID=gene2365;Name=YPD4_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11870;old_locus_tag=YPD4_2011
NC_017154.1	Protein Homology	CDS	2570796	2571806	.	-	0	ID=cds2326;Parent=gene2365;Dbxref=Genbank:WP_002227913.1;Name=WP_002227913.1;gbkey=CDS;product=membrane protein;protein_id=WP_002227913.1;transl_table=11
NC_017154.1	RefSeq	gene	2572352	2573797	.	-	.	ID=gene2366;Name=YPD4_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11875;old_locus_tag=YPD4_2012
NC_017154.1	Protein Homology	CDS	2572352	2573797	.	-	0	ID=cds2327;Parent=gene2366;Dbxref=Genbank:WP_002211024.1;Name=WP_002211024.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002211024.1;transl_table=11
NC_017154.1	RefSeq	gene	2574038	2574556	.	+	.	ID=gene2367;Name=YPD4_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11880;old_locus_tag=YPD4_2013
NC_017154.1	Protein Homology	CDS	2574038	2574556	.	+	0	ID=cds2328;Parent=gene2367;Dbxref=Genbank:WP_002211023.1;Name=WP_002211023.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_002211023.1;transl_table=11
NC_017154.1	RefSeq	gene	2574629	2575381	.	+	.	ID=gene2368;Name=YPD4_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11885;old_locus_tag=YPD4_2014
NC_017154.1	Protein Homology	CDS	2574629	2575381	.	+	0	ID=cds2329;Parent=gene2368;Dbxref=Genbank:WP_002211022.1;Name=WP_002211022.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;product=fumarate and nitrate reduction regulatory protein;protein_id=WP_002211022.1;transl_table=11
NC_017154.1	RefSeq	gene	2575516	2576472	.	+	.	ID=gene2369;Name=YPD4_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11890;old_locus_tag=YPD4_2015
NC_017154.1	Protein Homology	CDS	2575516	2576472	.	+	0	ID=cds2330;Parent=gene2369;Dbxref=Genbank:WP_002211021.1;Name=WP_002211021.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;product=universal stress protein E;protein_id=WP_002211021.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2576527	2576701	.	+	.	ID=id185;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2576747	2578141	.	-	.	ID=gene2370;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=YPD4_RS11895;old_locus_tag=YPD4_2016
NC_017154.1	Protein Homology	CDS	2576747	2578141	.	-	0	ID=cds2331;Parent=gene2370;Dbxref=Genbank:WP_002211020.1;Name=WP_002211020.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_002211020.1;transl_table=11
NC_017154.1	RefSeq	gene	2578214	2579740	.	-	.	ID=gene2371;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=YPD4_RS11900;old_locus_tag=YPD4_2017
NC_017154.1	Protein Homology	CDS	2578214	2579740	.	-	0	ID=cds2332;Parent=gene2371;Dbxref=Genbank:WP_002211019.1;Name=WP_002211019.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_002211019.1;transl_table=11
NC_017154.1	RefSeq	gene	2579861	2580064	.	-	.	ID=gene2372;Name=YPD4_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11905
NC_017154.1	Protein Homology	CDS	2579861	2580064	.	-	0	ID=cds2333;Parent=gene2372;Dbxref=Genbank:WP_002227912.1;Name=WP_002227912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227912.1;transl_table=11
NC_017154.1	RefSeq	gene	2580270	2581223	.	+	.	ID=gene2373;Name=YPD4_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11910;old_locus_tag=YPD4_2018
NC_017154.1	Protein Homology	CDS	2580270	2581223	.	+	0	ID=cds2334;Parent=gene2373;Dbxref=Genbank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211018.1;transl_table=11
NC_017154.1	RefSeq	gene	2581493	2582884	.	+	.	ID=gene2374;Name=YPD4_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11915;old_locus_tag=YPD4_2019
NC_017154.1	Protein Homology	CDS	2581493	2582884	.	+	0	ID=cds2335;Parent=gene2374;Dbxref=Genbank:WP_002211017.1;Name=WP_002211017.1;gbkey=CDS;product=arginine:ornithine antiporter;protein_id=WP_002211017.1;transl_table=11
NC_017154.1	RefSeq	gene	2582908	2583324	.	-	.	ID=gene2375;Name=YPD4_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11920;old_locus_tag=YPD4_2020
NC_017154.1	Protein Homology	CDS	2582908	2583324	.	-	0	ID=cds2336;Parent=gene2375;Dbxref=Genbank:WP_002211016.1;Name=WP_002211016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211016.1;transl_table=11
NC_017154.1	RefSeq	gene	2583621	2584367	.	+	.	ID=gene2376;Name=YPD4_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11925;old_locus_tag=YPD4_2021
NC_017154.1	Protein Homology	CDS	2583621	2584367	.	+	0	ID=cds2337;Parent=gene2376;Dbxref=Genbank:WP_002211015.1;Name=WP_002211015.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211015.1;transl_table=11
NC_017154.1	RefSeq	gene	2584416	2585672	.	+	.	ID=gene2377;Name=YPD4_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11930;old_locus_tag=YPD4_2022
NC_017154.1	Protein Homology	CDS	2584416	2585672	.	+	0	ID=cds2338;Parent=gene2377;Dbxref=Genbank:WP_002354278.1;Name=WP_002354278.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002354278.1;transl_table=11
NC_017154.1	RefSeq	gene	2585766	2587265	.	+	.	ID=gene2378;Name=YPD4_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11935;old_locus_tag=YPD4_2023
NC_017154.1	Protein Homology	CDS	2585766	2587265	.	+	0	ID=cds2339;Parent=gene2378;Dbxref=Genbank:WP_002211014.1;Name=WP_002211014.1;gbkey=CDS;product=peptidase M32;protein_id=WP_002211014.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2587276	2587994	.	+	.	ID=id186;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2587387	2587845	.	-	.	ID=gene2379;Name=YPD4_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11940;old_locus_tag=YPD4_2024
NC_017154.1	Protein Homology	CDS	2587387	2587845	.	-	0	ID=cds2340;Parent=gene2379;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	2587835	2588005	.	-	.	ID=gene2380;Name=YPD4_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11945
NC_017154.1	Protein Homology	CDS	2587835	2588005	.	-	0	ID=cds2341;Parent=gene2380;Dbxref=Genbank:WP_025470768.1;Name=WP_025470768.1;gbkey=CDS;product=transposase;protein_id=WP_025470768.1;transl_table=11
NC_017154.1	RefSeq	gene	2588815	2591439	.	+	.	ID=gene2381;Name=YPD4_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11950;old_locus_tag=YPD4_2025
NC_017154.1	Protein Homology	CDS	2588815	2591439	.	+	0	ID=cds2342;Parent=gene2381;Dbxref=Genbank:WP_002211013.1;Name=WP_002211013.1;gbkey=CDS;product=toxin TccC3;protein_id=WP_002211013.1;transl_table=11
NC_017154.1	RefSeq	gene	2591442	2591798	.	+	.	ID=gene2382;Name=YPD4_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11955;old_locus_tag=YPD4_2026
NC_017154.1	Protein Homology	CDS	2591442	2591798	.	+	0	ID=cds2343;Parent=gene2382;Dbxref=Genbank:WP_002227910.1;Name=WP_002227910.1;gbkey=CDS;product=DNA gyrase;protein_id=WP_002227910.1;transl_table=11
NC_017154.1	RefSeq	gene	2591902	2592060	.	-	.	ID=gene2383;Name=YPD4_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11960
NC_017154.1	Protein Homology	CDS	2591902	2592060	.	-	0	ID=cds2344;Parent=gene2383;Dbxref=Genbank:WP_002214618.1;Name=WP_002214618.1;gbkey=CDS;product=invertase;protein_id=WP_002214618.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2592414	2592588	.	+	.	ID=id187;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2592625	2593203	.	-	.	ID=gene2384;Name=YPD4_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11965;old_locus_tag=YPD4_2027
NC_017154.1	Protein Homology	CDS	2592625	2593203	.	-	0	ID=cds2345;Parent=gene2384;Dbxref=Genbank:WP_002211011.1;Name=WP_002211011.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211011.1;transl_table=11
NC_017154.1	RefSeq	gene	2593229	2593783	.	-	.	ID=gene2385;Name=YPD4_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11970;old_locus_tag=YPD4_2028
NC_017154.1	Protein Homology	CDS	2593229	2593783	.	-	0	ID=cds2346;Parent=gene2385;Dbxref=Genbank:WP_002211010.1;Name=WP_002211010.1;gbkey=CDS;product=cytochrome B561;protein_id=WP_002211010.1;transl_table=11
NC_017154.1	RefSeq	gene	2594178	2594390	.	+	.	ID=gene2386;Name=YPD4_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11975
NC_017154.1	Protein Homology	CDS	2594178	2594390	.	+	0	ID=cds2347;Parent=gene2386;Dbxref=Genbank:WP_002214613.1;Name=WP_002214613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214613.1;transl_table=11
NC_017154.1	RefSeq	gene	2594387	2594671	.	+	.	ID=gene2387;Name=YPD4_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11980
NC_017154.1	Protein Homology	CDS	2594387	2594671	.	+	0	ID=cds2348;Parent=gene2387;Dbxref=Genbank:WP_002211009.1;Name=WP_002211009.1;gbkey=CDS;product=acid shock protein;protein_id=WP_002211009.1;transl_table=11
NC_017154.1	RefSeq	gene	2595005	2595841	.	+	.	ID=gene2388;Name=YPD4_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11985;old_locus_tag=YPD4_2029
NC_017154.1	Protein Homology	CDS	2595005	2595841	.	+	0	ID=cds2349;Parent=gene2388;Dbxref=Genbank:WP_002211008.1;Name=WP_002211008.1;gbkey=CDS;product=peptidase;protein_id=WP_002211008.1;transl_table=11
NC_017154.1	RefSeq	gene	2595897	2596220	.	-	.	ID=gene2389;Name=YPD4_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11990;old_locus_tag=YPD4_2030
NC_017154.1	Protein Homology	CDS	2595897	2596220	.	-	0	ID=cds2350;Parent=gene2389;Dbxref=Genbank:WP_002211007.1;Name=WP_002211007.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211007.1;transl_table=11
NC_017154.1	RefSeq	gene	2596217	2596546	.	-	.	ID=gene2390;Name=YPD4_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS11995;old_locus_tag=YPD4_2031
NC_017154.1	Protein Homology	CDS	2596217	2596546	.	-	0	ID=cds2351;Parent=gene2390;Dbxref=Genbank:WP_015683954.1;Name=WP_015683954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683954.1;transl_table=11
NC_017154.1	RefSeq	gene	2596885	2600727	.	-	.	ID=gene2391;Name=YPD4_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12000;old_locus_tag=YPD4_2032
NC_017154.1	Protein Homology	CDS	2596885	2600727	.	-	0	ID=cds2352;Parent=gene2391;Dbxref=Genbank:WP_002214608.1;Name=WP_002214608.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_002214608.1;transl_table=11
NC_017154.1	RefSeq	gene	2601195	2601800	.	+	.	ID=gene2392;Name=YPD4_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12005;old_locus_tag=YPD4_2033
NC_017154.1	Protein Homology	CDS	2601195	2601800	.	+	0	ID=cds2353;Parent=gene2392;Dbxref=Genbank:WP_002211004.1;Name=WP_002211004.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11
NC_017154.1	RefSeq	gene	2601921	2602877	.	-	.	ID=gene2393;Name=YPD4_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12010;old_locus_tag=YPD4_2034
NC_017154.1	Protein Homology	CDS	2601921	2602877	.	-	0	ID=cds2354;Parent=gene2393;Dbxref=Genbank:WP_015683955.1;Name=WP_015683955.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_015683955.1;transl_table=11
NC_017154.1	RefSeq	gene	2603087	2604478	.	+	.	ID=gene2394;Name=YPD4_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12015;old_locus_tag=YPD4_2035
NC_017154.1	Protein Homology	CDS	2603087	2604478	.	+	0	ID=cds2355;Parent=gene2394;Dbxref=Genbank:WP_002211002.1;Name=WP_002211002.1;gbkey=CDS;product=D-arabinitol 4-dehydrogenase;protein_id=WP_002211002.1;transl_table=11
NC_017154.1	RefSeq	gene	2604661	2605032	.	-	.	ID=gene2395;Name=YPD4_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12020;old_locus_tag=YPD4_2036
NC_017154.1	Protein Homology	CDS	2604661	2605032	.	-	0	ID=cds2356;Parent=gene2395;Dbxref=Genbank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211001.1;transl_table=11
NC_017154.1	RefSeq	gene	2605042	2605236	.	-	.	ID=gene2396;Name=YPD4_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12025
NC_017154.1	Protein Homology	CDS	2605042	2605236	.	-	0	ID=cds2357;Parent=gene2396;Dbxref=Genbank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211000.1;transl_table=11
NC_017154.1	RefSeq	gene	2605233	2607929	.	-	.	ID=gene2397;Name=YPD4_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12030;old_locus_tag=YPD4_2037
NC_017154.1	Protein Homology	CDS	2605233	2607929	.	-	0	ID=cds2358;Parent=gene2397;Dbxref=Genbank:WP_002210999.1;Name=WP_002210999.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210999.1;transl_table=11
NC_017154.1	RefSeq	gene	2608195	2609187	.	+	.	ID=gene2398;Name=YPD4_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12035;old_locus_tag=YPD4_2038
NC_017154.1	Protein Homology	CDS	2608195	2609187	.	+	0	ID=cds2359;Parent=gene2398;Dbxref=Genbank:WP_002210998.1;Name=WP_002210998.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210998.1;transl_table=11
NC_017154.1	RefSeq	gene	2609257	2609709	.	+	.	ID=gene2399;Name=YPD4_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12040;old_locus_tag=YPD4_2039
NC_017154.1	Protein Homology	CDS	2609257	2609709	.	+	0	ID=cds2360;Parent=gene2399;Dbxref=Genbank:WP_002214605.1;Name=WP_002214605.1;gbkey=CDS;product=heat-inducible protein;protein_id=WP_002214605.1;transl_table=11
NC_017154.1	RefSeq	gene	2609767	2610078	.	-	.	ID=gene2400;Name=YPD4_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12045;old_locus_tag=YPD4_2040
NC_017154.1	Protein Homology	CDS	2609767	2610078	.	-	0	ID=cds2361;Parent=gene2400;Dbxref=Genbank:WP_002210996.1;Name=WP_002210996.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210996.1;transl_table=11
NC_017154.1	RefSeq	gene	2610393	2611052	.	+	.	ID=gene2401;Name=YPD4_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12050;old_locus_tag=YPD4_2041
NC_017154.1	Protein Homology	CDS	2610393	2611052	.	+	0	ID=cds2362;Parent=gene2401;Dbxref=Genbank:WP_002210995.1;Name=WP_002210995.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002210995.1;transl_table=11
NC_017154.1	RefSeq	gene	2611112	2611444	.	-	.	ID=gene2402;Name=YPD4_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12055;old_locus_tag=YPD4_2042
NC_017154.1	Protein Homology	CDS	2611112	2611444	.	-	0	ID=cds2363;Parent=gene2402;Dbxref=Genbank:WP_002210994.1;Name=WP_002210994.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002210994.1;transl_table=11
NC_017154.1	RefSeq	gene	2611923	2615456	.	+	.	ID=gene2403;Name=YPD4_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12060;old_locus_tag=YPD4_2043
NC_017154.1	Protein Homology	CDS	2611923	2615456	.	+	0	ID=cds2364;Parent=gene2403;Dbxref=Genbank:WP_002210993.1;Name=WP_002210993.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_002210993.1;transl_table=11
NC_017154.1	RefSeq	gene	2615731	2616672	.	+	.	ID=gene2404;Name=YPD4_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12065;old_locus_tag=YPD4_2044
NC_017154.1	Protein Homology	CDS	2615731	2616672	.	+	0	ID=cds2365;Parent=gene2404;Dbxref=Genbank:WP_002210992.1;Name=WP_002210992.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_002210992.1;transl_table=11
NC_017154.1	RefSeq	gene	2616943	2617947	.	+	.	ID=gene2405;Name=YPD4_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12070;old_locus_tag=YPD4_2045
NC_017154.1	Protein Homology	CDS	2616943	2617947	.	+	0	ID=cds2366;Parent=gene2405;Dbxref=Genbank:WP_002210991.1;Name=WP_002210991.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002210991.1;transl_table=11
NC_017154.1	RefSeq	gene	2618259	2619098	.	+	.	ID=gene2406;Name=YPD4_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12075;old_locus_tag=YPD4_2046
NC_017154.1	Protein Homology	CDS	2618259	2619098	.	+	0	ID=cds2367;Parent=gene2406;Dbxref=Genbank:WP_002210990.1;Name=WP_002210990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210990.1;transl_table=11
NC_017154.1	RefSeq	gene	2619472	2620455	.	-	.	ID=gene2407;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=YPD4_RS12080;old_locus_tag=YPD4_2047
NC_017154.1	Protein Homology	CDS	2619472	2620455	.	-	0	ID=cds2368;Parent=gene2407;Dbxref=Genbank:WP_002227906.1;Name=WP_002227906.1;gbkey=CDS;gene=zntB;product=zinc transporter ZntB;protein_id=WP_002227906.1;transl_table=11
NC_017154.1	RefSeq	gene	2620698	2622314	.	-	.	ID=gene2408;Name=YPD4_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12085;old_locus_tag=YPD4_2048
NC_017154.1	Protein Homology	CDS	2620698	2622314	.	-	0	ID=cds2369;Parent=gene2408;Dbxref=Genbank:WP_002210987.1;Name=WP_002210987.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210987.1;transl_table=11
NC_017154.1	RefSeq	gene	2622755	2623462	.	+	.	ID=gene2409;Name=YPD4_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12090;old_locus_tag=YPD4_2049
NC_017154.1	Protein Homology	CDS	2622755	2623462	.	+	0	ID=cds2370;Parent=gene2409;Dbxref=Genbank:WP_002220315.1;Name=WP_002220315.1;gbkey=CDS;product=murein peptide amidase A;protein_id=WP_002220315.1;transl_table=11
NC_017154.1	RefSeq	gene	2623504	2624478	.	-	.	ID=gene2410;Name=YPD4_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12095;old_locus_tag=YPD4_2050
NC_017154.1	Protein Homology	CDS	2623504	2624478	.	-	0	ID=cds2371;Parent=gene2410;Dbxref=Genbank:WP_015683956.1;Name=WP_015683956.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;gbkey=CDS;product=L-Ala-D/L-Glu epimerase;protein_id=WP_015683956.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2624457	2626417	.	+	.	ID=id188;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2624548	2625570	.	+	.	ID=gene2411;Name=YPD4_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12100;old_locus_tag=YPD4_2051
NC_017154.1	Protein Homology	CDS	2624548	2625570	.	+	0	ID=cds2372;Parent=gene2411;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	2625570	2626349	.	+	.	ID=gene2412;Name=YPD4_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12105;old_locus_tag=YPD4_2052
NC_017154.1	Protein Homology	CDS	2625570	2626349	.	+	0	ID=cds2373;Parent=gene2412;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	2626900	2627133	.	-	.	ID=gene2413;Name=YPD4_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12110
NC_017154.1	Protein Homology	CDS	2626900	2627133	.	-	0	ID=cds2374;Parent=gene2413;Dbxref=Genbank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210862.1;transl_table=11
NC_017154.1	RefSeq	gene	2627288	2628544	.	-	.	ID=gene2414;Name=YPD4_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12115;old_locus_tag=YPD4_2053
NC_017154.1	Protein Homology	CDS	2627288	2628544	.	-	0	ID=cds2375;Parent=gene2414;Dbxref=Genbank:WP_002210864.1;Name=WP_002210864.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210864.1;transl_table=11
NC_017154.1	RefSeq	gene	2628937	2629185	.	-	.	ID=gene2415;Name=YPD4_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12120
NC_017154.1	Protein Homology	CDS	2628937	2629185	.	-	0	ID=cds2376;Parent=gene2415;Dbxref=Genbank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11
NC_017154.1	RefSeq	gene	2629750	2629944	.	+	.	ID=gene2416;Name=YPD4_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12125
NC_017154.1	Protein Homology	CDS	2629750	2629944	.	+	0	ID=cds2377;Parent=gene2416;Dbxref=Genbank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11
NC_017154.1	RefSeq	gene	2630346	2631575	.	+	.	ID=gene2417;Name=YPD4_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12130;old_locus_tag=YPD4_2054
NC_017154.1	Protein Homology	CDS	2630346	2631575	.	+	0	ID=cds2378;Parent=gene2417;Dbxref=Genbank:WP_002210868.1;Name=WP_002210868.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;product=alanine racemase;protein_id=WP_002210868.1;transl_table=11
NC_017154.1	RefSeq	gene	2632194	2633147	.	-	.	ID=gene2418;Name=YPD4_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12135;old_locus_tag=YPD4_2055
NC_017154.1	Protein Homology	CDS	2632194	2633147	.	-	0	ID=cds2379;Parent=gene2418;Dbxref=Genbank:WP_002210869.1;Name=WP_002210869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210869.1;transl_table=11
NC_017154.1	RefSeq	gene	2633247	2633681	.	-	.	ID=gene2419;Name=YPD4_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12140;old_locus_tag=YPD4_2056
NC_017154.1	Protein Homology	CDS	2633247	2633681	.	-	0	ID=cds2380;Parent=gene2419;Dbxref=Genbank:WP_002215939.1;Name=WP_002215939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215939.1;transl_table=11
NC_017154.1	RefSeq	gene	2633668	2635761	.	-	.	ID=gene2420;Name=YPD4_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12145;old_locus_tag=YPD4_2057
NC_017154.1	Protein Homology	CDS	2633668	2635761	.	-	0	ID=cds2381;Parent=gene2420;Dbxref=Genbank:WP_002377800.1;Name=WP_002377800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002377800.1;transl_table=11
NC_017154.1	RefSeq	gene	2636235	2636999	.	-	.	ID=gene2421;Name=YPD4_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12150;old_locus_tag=YPD4_2058
NC_017154.1	Protein Homology	CDS	2636235	2636999	.	-	0	ID=cds2382;Parent=gene2421;Dbxref=Genbank:WP_002210870.1;Name=WP_002210870.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210870.1;transl_table=11
NC_017154.1	RefSeq	gene	2637131	2637250	.	+	.	ID=gene2422;Name=YPD4_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12155
NC_017154.1	Protein Homology	CDS	2637131	2637250	.	+	0	ID=cds2383;Parent=gene2422;Dbxref=Genbank:WP_002210871.1;Name=WP_002210871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210871.1;transl_table=11
NC_017154.1	RefSeq	gene	2637570	2638214	.	-	.	ID=gene2423;Name=YPD4_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12160;old_locus_tag=YPD4_2059
NC_017154.1	Protein Homology	CDS	2637570	2638214	.	-	0	ID=cds2384;Parent=gene2423;Dbxref=Genbank:WP_002210872.1;Name=WP_002210872.1;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;gbkey=CDS;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11
NC_017154.1	RefSeq	gene	2638224	2638613	.	-	.	ID=gene2424;Name=YPD4_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12165;old_locus_tag=YPD4_2060
NC_017154.1	Protein Homology	CDS	2638224	2638613	.	-	0	ID=cds2385;Parent=gene2424;Dbxref=Genbank:WP_002210873.1;Name=WP_002210873.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_002210873.1;transl_table=11
NC_017154.1	RefSeq	gene	2638714	2639763	.	-	.	ID=gene2425;Name=YPD4_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12170;old_locus_tag=YPD4_2061
NC_017154.1	Protein Homology	CDS	2638714	2639763	.	-	0	ID=cds2386;Parent=gene2425;Dbxref=Genbank:WP_015683957.1;Name=WP_015683957.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;product=two-component system protein-glutamate methylesterase response regulator;protein_id=WP_015683957.1;transl_table=11
NC_017154.1	RefSeq	gene	2639763	2640635	.	-	.	ID=gene2426;Name=YPD4_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12175;old_locus_tag=YPD4_2062
NC_017154.1	Protein Homology	CDS	2639763	2640635	.	-	0	ID=cds2387;Parent=gene2426;Dbxref=Genbank:WP_002214065.1;Name=WP_002214065.1;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein CheR;protein_id=WP_002214065.1;transl_table=11
NC_017154.1	RefSeq	gene	2640808	2642418	.	-	.	ID=gene2427;Name=YPD4_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12180;old_locus_tag=YPD4_2063
NC_017154.1	Protein Homology	CDS	2640808	2642418	.	-	0	ID=cds2388;Parent=gene2427;Dbxref=Genbank:WP_002220817.1;Name=WP_002220817.1;Note=mediates taxis toward dipeptides;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002220817.1;transl_table=11
NC_017154.1	RefSeq	gene	2642602	2644275	.	-	.	ID=gene2428;Name=YPD4_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12185;old_locus_tag=YPD4_2064
NC_017154.1	Protein Homology	CDS	2642602	2644275	.	-	0	ID=cds2389;Parent=gene2428;Dbxref=Genbank:WP_002210876.1;Name=WP_002210876.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210876.1;transl_table=11
NC_017154.1	RefSeq	gene	2644516	2645217	.	-	.	ID=gene2429;Name=YPD4_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12190;old_locus_tag=YPD4_2065
NC_017154.1	Protein Homology	CDS	2644516	2645217	.	-	0	ID=cds2390;Parent=gene2429;Dbxref=Genbank:WP_002214064.1;Name=WP_002214064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214064.1;transl_table=11
NC_017154.1	RefSeq	gene	2645286	2648162	.	-	.	ID=gene2430;Name=YPD4_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12195;old_locus_tag=YPD4_2066
NC_017154.1	Protein Homology	CDS	2645286	2648162	.	-	0	ID=cds2391;Parent=gene2430;Dbxref=Genbank:WP_002210878.1;Name=WP_002210878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210878.1;transl_table=11
NC_017154.1	RefSeq	gene	2648690	2652496	.	-	.	ID=gene2431;Name=YPD4_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12200;old_locus_tag=YPD4_2067
NC_017154.1	Protein Homology	CDS	2648690	2652496	.	-	0	ID=cds2392;Parent=gene2431;Dbxref=Genbank:WP_002210880.1;Name=WP_002210880.1;gbkey=CDS;product=autotransporter;protein_id=WP_002210880.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2648690	2650820	.	+	.	ID=id189;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2652971	2653636	.	-	.	ID=gene2432;Name=YPD4_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12205;old_locus_tag=YPD4_2068
NC_017154.1	Protein Homology	CDS	2652971	2653636	.	-	0	ID=cds2393;Parent=gene2432;Dbxref=Genbank:WP_002210881.1;Name=WP_002210881.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210881.1;transl_table=11
NC_017154.1	RefSeq	gene	2653826	2654812	.	+	.	ID=gene2433;Name=YPD4_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12210;old_locus_tag=YPD4_2069
NC_017154.1	Protein Homology	CDS	2653826	2654812	.	+	0	ID=cds2394;Parent=gene2433;Dbxref=Genbank:WP_002210882.1;Name=WP_002210882.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210882.1;transl_table=11
NC_017154.1	RefSeq	gene	2654809	2655186	.	+	.	ID=gene2434;Name=YPD4_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12215;old_locus_tag=YPD4_2070
NC_017154.1	Protein Homology	CDS	2654809	2655186	.	+	0	ID=cds2395;Parent=gene2434;Dbxref=Genbank:WP_002210883.1;Name=WP_002210883.1;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=WP_002210883.1;transl_table=11
NC_017154.1	RefSeq	gene	2655199	2656434	.	+	.	ID=gene2435;Name=YPD4_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12220;old_locus_tag=YPD4_2071
NC_017154.1	Protein Homology	CDS	2655199	2656434	.	+	0	ID=cds2396;Parent=gene2435;Dbxref=Genbank:WP_002210884.1;Name=WP_002210884.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210884.1;transl_table=11
NC_017154.1	RefSeq	gene	2656726	2657223	.	-	.	ID=gene2436;Name=YPD4_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12225;old_locus_tag=YPD4_2072
NC_017154.1	Protein Homology	CDS	2656726	2657223	.	-	0	ID=cds2397;Parent=gene2436;Dbxref=Genbank:WP_002210885.1;Name=WP_002210885.1;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=WP_002210885.1;transl_table=11
NC_017154.1	RefSeq	gene	2657386	2659551	.	-	.	ID=gene2437;Name=YPD4_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12230;old_locus_tag=YPD4_2073
NC_017154.1	Protein Homology	CDS	2657386	2659551	.	-	0	ID=cds2398;Parent=gene2437;Dbxref=Genbank:WP_002210886.1;Name=WP_002210886.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_002210886.1;transl_table=11
NC_017154.1	RefSeq	gene	2659605	2659967	.	+	.	ID=gene2438;Name=YPD4_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12235;old_locus_tag=YPD4_2074
NC_017154.1	Protein Homology	CDS	2659605	2659967	.	+	0	ID=cds2399;Parent=gene2438;Dbxref=Genbank:WP_011055479.1;Name=WP_011055479.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011055479.1;transl_table=11
NC_017154.1	RefSeq	gene	2659904	2660850	.	-	.	ID=gene2439;Name=YPD4_RS12240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS12240;old_locus_tag=YPD4_2075;partial=true;pseudo=true;start_range=.,2659904
NC_017154.1	Protein Homology	CDS	2659904	2660850	.	-	0	ID=cds2400;Parent=gene2439;exception=annotated by transcript or proteomic data;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2659904;transl_table=11
NC_017154.1	RefSeq	gene	2660847	2661734	.	-	.	ID=gene2440;Name=YPD4_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12245;old_locus_tag=YPD4_2076
NC_017154.1	Protein Homology	CDS	2660847	2661734	.	-	0	ID=cds2401;Parent=gene2440;Dbxref=Genbank:WP_002210888.1;Name=WP_002210888.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_002210888.1;transl_table=11
NC_017154.1	RefSeq	gene	2661939	2662520	.	-	.	ID=gene2441;Name=YPD4_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12250;old_locus_tag=YPD4_2077
NC_017154.1	Protein Homology	CDS	2661939	2662520	.	-	0	ID=cds2402;Parent=gene2441;Dbxref=Genbank:WP_002210889.1;Name=WP_002210889.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210889.1;transl_table=11
NC_017154.1	RefSeq	gene	2662524	2662875	.	-	.	ID=gene2442;Name=YPD4_RS12255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS12255;pseudo=true
NC_017154.1	Protein Homology	CDS	2662524	2662875	.	-	0	ID=cds2403;Parent=gene2442;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2664063	2666762	.	-	.	ID=gene2443;Name=YPD4_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12260;old_locus_tag=YPD4_2078
NC_017154.1	Protein Homology	CDS	2664063	2666762	.	-	0	ID=cds2404;Parent=gene2443;Dbxref=Genbank:WP_002210890.1;Name=WP_002210890.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;product=magnesium-translocating P-type ATPase;protein_id=WP_002210890.1;transl_table=11
NC_017154.1	RefSeq	gene	2667163	2667861	.	-	.	ID=gene2444;Name=YPD4_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12265;old_locus_tag=YPD4_2079
NC_017154.1	Protein Homology	CDS	2667163	2667861	.	-	0	ID=cds2405;Parent=gene2444;Dbxref=Genbank:WP_002210891.1;Name=WP_002210891.1;gbkey=CDS;product=magnesium transporter;protein_id=WP_002210891.1;transl_table=11
NC_017154.1	RefSeq	gene	2668213	2668383	.	-	.	ID=gene2445;Name=YPD4_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12270
NC_017154.1	Protein Homology	CDS	2668213	2668383	.	-	0	ID=cds2406;Parent=gene2445;Dbxref=Genbank:WP_002214053.1;Name=WP_002214053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214053.1;transl_table=11
NC_017154.1	RefSeq	gene	2669020	2670721	.	+	.	ID=gene2446;Name=YPD4_RS12275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS12275;pseudo=true
NC_017154.1	Protein Homology	CDS	2669020	2670721	.	+	0	ID=cds2407;Parent=gene2446;exception=annotated by transcript or proteomic data;gbkey=CDS;product=chemotaxis protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2670904	2671095	.	-	.	ID=gene2447;Name=YPD4_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12280
NC_017154.1	Protein Homology	CDS	2670904	2671095	.	-	0	ID=cds2408;Parent=gene2447;Dbxref=Genbank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11
NC_017154.1	cmsearch	region	2671261	2671703	.	-	.	ID=id190;Note=cspA;gbkey=misc_feature
NC_017154.1	RefSeq	gene	2671310	2671522	.	-	.	ID=gene2448;Name=YPD4_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12285
NC_017154.1	Protein Homology	CDS	2671310	2671522	.	-	0	ID=cds2409;Parent=gene2448;Dbxref=Genbank:WP_002210893.1;Name=WP_002210893.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210893.1;transl_table=11
NC_017154.1	RefSeq	gene	2672063	2675245	.	+	.	ID=gene2449;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=YPD4_RS12290;old_locus_tag=YPD4_2082
NC_017154.1	Protein Homology	CDS	2672063	2675245	.	+	0	ID=cds2410;Parent=gene2449;Dbxref=Genbank:WP_002214048.1;Name=WP_002214048.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-galactosidase;protein_id=WP_002214048.1;transl_table=11
NC_017154.1	RefSeq	gene	2675652	2676662	.	+	.	ID=gene2450;Name=YPD4_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12295;old_locus_tag=YPD4_2083
NC_017154.1	Protein Homology	CDS	2675652	2676662	.	+	0	ID=cds2411;Parent=gene2450;Dbxref=Genbank:WP_002210897.1;Name=WP_002210897.1;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=WP_002210897.1;transl_table=11
NC_017154.1	RefSeq	gene	2676945	2677478	.	+	.	ID=gene2451;Name=YPD4_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12300;old_locus_tag=YPD4_2084
NC_017154.1	Protein Homology	CDS	2676945	2677478	.	+	0	ID=cds2412;Parent=gene2451;Dbxref=Genbank:WP_002214045.1;Name=WP_002214045.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214045.1;transl_table=11
NC_017154.1	RefSeq	gene	2677984	2678433	.	+	.	ID=gene2452;Name=YPD4_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12305;old_locus_tag=YPD4_2085
NC_017154.1	Protein Homology	CDS	2677984	2678433	.	+	0	ID=cds2413;Parent=gene2452;Dbxref=Genbank:WP_002210900.1;Name=WP_002210900.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002210900.1;transl_table=11
NC_017154.1	RefSeq	gene	2678525	2679424	.	+	.	ID=gene2453;Name=YPD4_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12310;old_locus_tag=YPD4_2086
NC_017154.1	Protein Homology	CDS	2678525	2679424	.	+	0	ID=cds2414;Parent=gene2453;Dbxref=Genbank:WP_002210901.1;Name=WP_002210901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210901.1;transl_table=11
NC_017154.1	RefSeq	gene	2679727	2679930	.	+	.	ID=gene2454;Name=YPD4_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12315
NC_017154.1	Protein Homology	CDS	2679727	2679930	.	+	0	ID=cds2415;Parent=gene2454;Dbxref=Genbank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210902.1;transl_table=11
NC_017154.1	RefSeq	gene	2680232	2681557	.	-	.	ID=gene2455;Name=YPD4_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12320;old_locus_tag=YPD4_2087
NC_017154.1	Protein Homology	CDS	2680232	2681557	.	-	0	ID=cds2416;Parent=gene2455;Dbxref=Genbank:WP_002210903.1;Name=WP_002210903.1;gbkey=CDS;product=phosphoanhydride phosphorylase;protein_id=WP_002210903.1;transl_table=11
NC_017154.1	RefSeq	gene	2681858	2682031	.	-	.	ID=gene2456;Name=YPD4_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12325
NC_017154.1	Protein Homology	CDS	2681858	2682031	.	-	0	ID=cds2417;Parent=gene2456;Dbxref=Genbank:WP_002210904.1;Name=WP_002210904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210904.1;transl_table=11
NC_017154.1	RefSeq	gene	2682089	2682472	.	-	.	ID=gene2457;Name=YPD4_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12330;old_locus_tag=YPD4_2088
NC_017154.1	Protein Homology	CDS	2682089	2682472	.	-	0	ID=cds2418;Parent=gene2457;Dbxref=Genbank:WP_002227977.1;Name=WP_002227977.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002227977.1;transl_table=11
NC_017154.1	RefSeq	gene	2682632	2683489	.	+	.	ID=gene2458;Name=YPD4_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12335;old_locus_tag=YPD4_2089
NC_017154.1	Protein Homology	CDS	2682632	2683489	.	+	0	ID=cds2419;Parent=gene2458;Dbxref=Genbank:WP_002210906.1;Name=WP_002210906.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210906.1;transl_table=11
NC_017154.1	RefSeq	gene	2684409	2685989	.	+	.	ID=gene2459;Name=YPD4_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12340;old_locus_tag=YPD4_2090
NC_017154.1	Protein Homology	CDS	2684409	2685989	.	+	0	ID=cds2420;Parent=gene2459;Dbxref=Genbank:WP_002210907.1;Name=WP_002210907.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210907.1;transl_table=11
NC_017154.1	RefSeq	gene	2686109	2686369	.	+	.	ID=gene2460;Name=YPD4_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12345
NC_017154.1	Protein Homology	CDS	2686109	2686369	.	+	0	ID=cds2421;Parent=gene2460;Dbxref=Genbank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11
NC_017154.1	RefSeq	gene	2686645	2687688	.	+	.	ID=gene2461;Name=YPD4_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12350;old_locus_tag=YPD4_2091
NC_017154.1	Protein Homology	CDS	2686645	2687688	.	+	0	ID=cds2422;Parent=gene2461;Dbxref=Genbank:WP_002210909.1;Name=WP_002210909.1;gbkey=CDS;product=sucrose operon repressor;protein_id=WP_002210909.1;transl_table=11
NC_017154.1	RefSeq	gene	2687834	2689087	.	-	.	ID=gene2462;Name=YPD4_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12355;old_locus_tag=YPD4_2092
NC_017154.1	Protein Homology	CDS	2687834	2689087	.	-	0	ID=cds2423;Parent=gene2462;Dbxref=Genbank:WP_002210910.1;Name=WP_002210910.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_002210910.1;transl_table=11
NC_017154.1	RefSeq	gene	2689218	2689844	.	+	.	ID=gene2463;Name=YPD4_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12360;old_locus_tag=YPD4_2093
NC_017154.1	Protein Homology	CDS	2689218	2689844	.	+	0	ID=cds2424;Parent=gene2463;Dbxref=Genbank:WP_002218214.1;Name=WP_002218214.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase E;protein_id=WP_002218214.1;transl_table=11
NC_017154.1	RefSeq	gene	2689837	2690283	.	+	.	ID=gene2464;Name=YPD4_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12365;old_locus_tag=YPD4_2094
NC_017154.1	Protein Homology	CDS	2689837	2690283	.	+	0	ID=cds2425;Parent=gene2464;Dbxref=Genbank:WP_002210912.1;Name=WP_002210912.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210912.1;transl_table=11
NC_017154.1	RefSeq	gene	2690470	2691585	.	+	.	ID=gene2465;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=YPD4_RS12370;old_locus_tag=YPD4_2095
NC_017154.1	Protein Homology	CDS	2690470	2691585	.	+	0	ID=cds2426;Parent=gene2465;Dbxref=Genbank:WP_002210913.1;Name=WP_002210913.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=WP_002210913.1;transl_table=11
NC_017154.1	RefSeq	gene	2691643	2692269	.	+	.	ID=gene2466;Name=YPD4_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12375;old_locus_tag=YPD4_2096
NC_017154.1	Protein Homology	CDS	2691643	2692269	.	+	0	ID=cds2427;Parent=gene2466;Dbxref=Genbank:WP_002210914.1;Name=WP_002210914.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=High frequency lysogenization protein HflD homolog;protein_id=WP_002210914.1;transl_table=11
NC_017154.1	RefSeq	gene	2692330	2693700	.	+	.	ID=gene2467;Name=YPD4_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12380;old_locus_tag=YPD4_2097
NC_017154.1	Protein Homology	CDS	2692330	2693700	.	+	0	ID=cds2428;Parent=gene2467;Dbxref=Genbank:WP_002210915.1;Name=WP_002210915.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_002210915.1;transl_table=11
NC_017154.1	RefSeq	gene	2693888	2694511	.	+	.	ID=gene2468;Name=YPD4_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12385;old_locus_tag=YPD4_2098
NC_017154.1	Protein Homology	CDS	2693888	2694511	.	+	0	ID=cds2429;Parent=gene2468;Dbxref=Genbank:WP_002210916.1;Name=WP_002210916.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210916.1;transl_table=11
NC_017154.1	RefSeq	gene	2694722	2695393	.	+	.	ID=gene2469;Name=YPD4_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12390;old_locus_tag=YPD4_2099
NC_017154.1	Protein Homology	CDS	2694722	2695393	.	+	0	ID=cds2430;Parent=gene2469;Dbxref=Genbank:WP_002210917.1;Name=WP_002210917.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210917.1;transl_table=11
NC_017154.1	RefSeq	gene	2695399	2696853	.	+	.	ID=gene2470;Name=YPD4_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12395;old_locus_tag=YPD4_2100
NC_017154.1	Protein Homology	CDS	2695399	2696853	.	+	0	ID=cds2431;Parent=gene2470;Dbxref=Genbank:WP_002210918.1;Name=WP_002210918.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_002210918.1;transl_table=11
NC_017154.1	RefSeq	gene	2696937	2698058	.	+	.	ID=gene2471;Name=YPD4_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12400;old_locus_tag=YPD4_2101
NC_017154.1	Protein Homology	CDS	2696937	2698058	.	+	0	ID=cds2432;Parent=gene2471;Dbxref=Genbank:WP_002210919.1;Name=WP_002210919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210919.1;transl_table=11
NC_017154.1	RefSeq	gene	2698291	2699526	.	-	.	ID=gene2472;Name=YPD4_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12405;old_locus_tag=YPD4_2102
NC_017154.1	Protein Homology	CDS	2698291	2699526	.	-	0	ID=cds2433;Parent=gene2472;Dbxref=Genbank:WP_002210920.1;Name=WP_002210920.1;gbkey=CDS;product=peptidase T;protein_id=WP_002210920.1;transl_table=11
NC_017154.1	RefSeq	gene	2699856	2700692	.	-	.	ID=gene2473;Name=YPD4_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12410;old_locus_tag=YPD4_2103
NC_017154.1	Protein Homology	CDS	2699856	2700692	.	-	0	ID=cds2434;Parent=gene2473;Dbxref=Genbank:WP_002210921.1;Name=WP_002210921.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=WP_002210921.1;transl_table=11
NC_017154.1	RefSeq	gene	2700886	2701656	.	-	.	ID=gene2474;Name=YPD4_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12415;old_locus_tag=YPD4_2104
NC_017154.1	Protein Homology	CDS	2700886	2701656	.	-	0	ID=cds2435;Parent=gene2474;Dbxref=Genbank:WP_002216175.1;Name=WP_002216175.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=WP_002216175.1;transl_table=11
NC_017154.1	RefSeq	gene	2701675	2702922	.	-	.	ID=gene2475;Name=YPD4_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12420;old_locus_tag=YPD4_2105
NC_017154.1	Protein Homology	CDS	2701675	2702922	.	-	0	ID=cds2436;Parent=gene2475;Dbxref=Genbank:WP_002210922.1;Name=WP_002210922.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002210922.1;transl_table=11
NC_017154.1	RefSeq	gene	2702922	2703626	.	-	.	ID=gene2476;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=YPD4_RS12425;old_locus_tag=YPD4_2106
NC_017154.1	Protein Homology	CDS	2702922	2703626	.	-	0	ID=cds2437;Parent=gene2476;Dbxref=Genbank:WP_015683959.1;Name=WP_015683959.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=WP_015683959.1;transl_table=11
NC_017154.1	RefSeq	gene	2703619	2704821	.	-	.	ID=gene2477;Name=YPD4_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12430;old_locus_tag=YPD4_2107
NC_017154.1	Protein Homology	CDS	2703619	2704821	.	-	0	ID=cds2438;Parent=gene2477;Dbxref=Genbank:WP_002222341.1;Name=WP_002222341.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002222341.1;transl_table=11
NC_017154.1	RefSeq	gene	2705091	2708537	.	+	.	ID=gene2478;Name=YPD4_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12435;old_locus_tag=YPD4_2108
NC_017154.1	Protein Homology	CDS	2705091	2708537	.	+	0	ID=cds2439;Parent=gene2478;Dbxref=Genbank:WP_002210924.1;Name=WP_002210924.1;gbkey=CDS;product=transcription-repair coupling factor;protein_id=WP_002210924.1;transl_table=11
NC_017154.1	RefSeq	gene	2708776	2709315	.	-	.	ID=gene2479;Name=YPD4_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12440;old_locus_tag=YPD4_2109
NC_017154.1	Protein Homology	CDS	2708776	2709315	.	-	0	ID=cds2440;Parent=gene2479;Dbxref=Genbank:WP_002210925.1;Name=WP_002210925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210925.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2709609	2710926	.	+	.	ID=id191;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2709645	2710853	.	-	.	ID=gene2480;Name=YPD4_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12445;old_locus_tag=YPD4_2110
NC_017154.1	Protein Homology	CDS	2709645	2710853	.	-	0	ID=cds2441;Parent=gene2480;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	2710949	2711362	.	-	.	ID=gene2481;Name=YPD4_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12450;old_locus_tag=YPD4_2111
NC_017154.1	Protein Homology	CDS	2710949	2711362	.	-	0	ID=cds2442;Parent=gene2481;Dbxref=Genbank:WP_002213101.1;Name=WP_002213101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213101.1;transl_table=11
NC_017154.1	RefSeq	gene	2711370	2711735	.	-	.	ID=gene2482;Name=YPD4_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12455;old_locus_tag=YPD4_2112
NC_017154.1	Protein Homology	CDS	2711370	2711735	.	-	0	ID=cds2443;Parent=gene2482;Dbxref=Genbank:WP_002213099.1;Name=WP_002213099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213099.1;transl_table=11
NC_017154.1	RefSeq	gene	2712477	2713781	.	-	.	ID=gene2483;Name=YPD4_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12460;old_locus_tag=YPD4_2113
NC_017154.1	Protein Homology	CDS	2712477	2713781	.	-	0	ID=cds2444;Parent=gene2483;Dbxref=Genbank:WP_002213097.1;Name=WP_002213097.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_002213097.1;transl_table=11
NC_017154.1	RefSeq	gene	2714156	2714698	.	-	.	ID=gene2484;Name=YPD4_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12465;old_locus_tag=YPD4_2114
NC_017154.1	Protein Homology	CDS	2714156	2714698	.	-	0	ID=cds2445;Parent=gene2484;Dbxref=Genbank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213095.1;transl_table=11
NC_017154.1	RefSeq	gene	2714826	2715845	.	-	.	ID=gene2485;Name=YPD4_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12470;old_locus_tag=YPD4_2115
NC_017154.1	Protein Homology	CDS	2714826	2715845	.	-	0	ID=cds2446;Parent=gene2485;Dbxref=Genbank:WP_002215854.1;Name=WP_002215854.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;product=beta-hexosaminidase;protein_id=WP_002215854.1;transl_table=11
NC_017154.1	RefSeq	gene	2715928	2716794	.	-	.	ID=gene2486;Name=YPD4_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12475;old_locus_tag=YPD4_2116
NC_017154.1	Protein Homology	CDS	2715928	2716794	.	-	0	ID=cds2447;Parent=gene2486;Dbxref=Genbank:WP_002213090.1;Name=WP_002213090.1;gbkey=CDS;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11
NC_017154.1	RefSeq	gene	2716775	2717350	.	-	.	ID=gene2487;Name=YPD4_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12480;old_locus_tag=YPD4_2117
NC_017154.1	Protein Homology	CDS	2716775	2717350	.	-	0	ID=cds2448;Parent=gene2487;Dbxref=Genbank:WP_002213089.1;Name=WP_002213089.1;gbkey=CDS;product=penicillin-binding protein activator LpoB;protein_id=WP_002213089.1;transl_table=11
NC_017154.1	RefSeq	gene	2717391	2717780	.	-	.	ID=gene2488;Name=YPD4_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12485;old_locus_tag=YPD4_2118
NC_017154.1	Protein Homology	CDS	2717391	2717780	.	-	0	ID=cds2449;Parent=gene2488;Dbxref=Genbank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002213088.1;transl_table=11
NC_017154.1	RefSeq	gene	2717815	2718168	.	-	.	ID=gene2489;Name=YPD4_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12490;old_locus_tag=YPD4_2119
NC_017154.1	Protein Homology	CDS	2717815	2718168	.	-	0	ID=cds2450;Parent=gene2489;Dbxref=Genbank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11
NC_017154.1	RefSeq	gene	2718342	2719160	.	-	.	ID=gene2490;Name=YPD4_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12495;old_locus_tag=YPD4_2120
NC_017154.1	Protein Homology	CDS	2718342	2719160	.	-	0	ID=cds2451;Parent=gene2490;Dbxref=Genbank:WP_002215853.1;Name=WP_002215853.1;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=WP_002215853.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2719489	2720213	.	+	.	ID=id192;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2719603	2720061	.	-	.	ID=gene2491;Name=YPD4_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12500;old_locus_tag=YPD4_2121
NC_017154.1	Protein Homology	CDS	2719603	2720061	.	-	0	ID=cds2452;Parent=gene2491;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	2720251	2721684	.	-	.	ID=gene2492;Name=YPD4_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12505;old_locus_tag=YPD4_2122
NC_017154.1	Protein Homology	CDS	2720251	2721684	.	-	0	ID=cds2453;Parent=gene2492;Dbxref=Genbank:WP_002213085.1;Name=WP_002213085.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIBC;protein_id=WP_002213085.1;transl_table=11
NC_017154.1	RefSeq	gene	2721990	2722799	.	-	.	ID=gene2493;Name=YPD4_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12510;old_locus_tag=YPD4_2123
NC_017154.1	Protein Homology	CDS	2721990	2722799	.	-	0	ID=cds2454;Parent=gene2493;Dbxref=Genbank:WP_015683960.1;Name=WP_015683960.1;gbkey=CDS;product=DNAse;protein_id=WP_015683960.1;transl_table=11
NC_017154.1	RefSeq	gene	2722814	2723836	.	-	.	ID=gene2494;Name=YPD4_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12515;old_locus_tag=YPD4_2124
NC_017154.1	Protein Homology	CDS	2722814	2723836	.	-	0	ID=cds2455;Parent=gene2494;Dbxref=Genbank:WP_002213083.1;Name=WP_002213083.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_002213083.1;transl_table=11
NC_017154.1	RefSeq	gene	2723836	2724474	.	-	.	ID=gene2495;Name=YPD4_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12520;old_locus_tag=YPD4_2125
NC_017154.1	Protein Homology	CDS	2723836	2724474	.	-	0	ID=cds2456;Parent=gene2495;Dbxref=Genbank:WP_002213082.1;Name=WP_002213082.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_002213082.1;transl_table=11
NC_017154.1	RefSeq	gene	2724464	2725489	.	-	.	ID=gene2496;Name=YPD4_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12525;old_locus_tag=YPD4_2126
NC_017154.1	Protein Homology	CDS	2724464	2725489	.	-	0	ID=cds2457;Parent=gene2496;Dbxref=Genbank:WP_002217396.1;Name=WP_002217396.1;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_002217396.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2725572	2725745	.	+	.	ID=id193;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2725778	2726584	.	-	.	ID=gene2497;Name=YPD4_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12530;old_locus_tag=YPD4_2127
NC_017154.1	Protein Homology	CDS	2725778	2726584	.	-	0	ID=cds2458;Parent=gene2497;Dbxref=Genbank:WP_002213080.1;Name=WP_002213080.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=WP_002213080.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2726888	2727608	.	+	.	ID=id194;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2727000	2727458	.	-	.	ID=gene2498;Name=YPD4_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12535;old_locus_tag=YPD4_2128
NC_017154.1	Protein Homology	CDS	2727000	2727458	.	-	0	ID=cds2459;Parent=gene2498;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	2727658	2728863	.	-	.	ID=gene2499;Name=YPD4_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12540;old_locus_tag=YPD4_2129
NC_017154.1	Protein Homology	CDS	2727658	2728863	.	-	0	ID=cds2460;Parent=gene2499;Dbxref=Genbank:WP_002354075.1;Name=WP_002354075.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002354075.1;transl_table=11
NC_017154.1	RefSeq	gene	2728965	2729231	.	-	.	ID=gene2500;Name=YPD4_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12545
NC_017154.1	Protein Homology	CDS	2728965	2729231	.	-	0	ID=cds2461;Parent=gene2500;Dbxref=Genbank:WP_044023364.1;Name=WP_044023364.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_044023364.1;transl_table=11
NC_017154.1	RefSeq	gene	2729385	2730120	.	-	.	ID=gene2501;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=pseudogene;locus_tag=YPD4_RS12550;pseudo=true
NC_017154.1	Protein Homology	CDS	2729385	2730120	.	-	0	ID=cds2462;Parent=gene2501;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2730134	2731063	.	-	.	ID=gene2502;Name=YPD4_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12555;old_locus_tag=YPD4_2131
NC_017154.1	Protein Homology	CDS	2730134	2731063	.	-	0	ID=cds2463;Parent=gene2502;Dbxref=Genbank:WP_002210934.1;Name=WP_002210934.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_002210934.1;transl_table=11
NC_017154.1	RefSeq	gene	2731101	2732051	.	-	.	ID=gene2503;Name=YPD4_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12560;old_locus_tag=YPD4_2132
NC_017154.1	Protein Homology	CDS	2731101	2732051	.	-	0	ID=cds2464;Parent=gene2503;Dbxref=Genbank:WP_002210933.1;Name=WP_002210933.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase III;protein_id=WP_002210933.1;transl_table=11
NC_017154.1	RefSeq	gene	2732058	2733062	.	-	.	ID=gene2504;Name=YPD4_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12565;old_locus_tag=YPD4_2133
NC_017154.1	Protein Homology	CDS	2732058	2733062	.	-	0	ID=cds2465;Parent=gene2504;Dbxref=Genbank:WP_032465670.1;Name=WP_032465670.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_032465670.1;transl_table=11
NC_017154.1	RefSeq	gene	2733126	2733293	.	-	.	ID=gene2505;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=YPD4_RS12570
NC_017154.1	Protein Homology	CDS	2733126	2733293	.	-	0	ID=cds2466;Parent=gene2505;Dbxref=Genbank:WP_002210931.1;Name=WP_002210931.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11
NC_017154.1	RefSeq	gene	2733306	2733830	.	-	.	ID=gene2506;Name=YPD4_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12575;old_locus_tag=YPD4_2134
NC_017154.1	Protein Homology	CDS	2733306	2733830	.	-	0	ID=cds2467;Parent=gene2506;Dbxref=Genbank:WP_002210930.1;Name=WP_002210930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210930.1;transl_table=11
NC_017154.1	RefSeq	gene	2733972	2734568	.	+	.	ID=gene2507;Name=YPD4_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12580;old_locus_tag=YPD4_2135
NC_017154.1	Protein Homology	CDS	2733972	2734568	.	+	0	ID=cds2468;Parent=gene2507;Dbxref=Genbank:WP_002210928.1;Name=WP_002210928.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210928.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2734613	2735335	.	+	.	ID=id195;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2734723	2735181	.	-	.	ID=gene2508;Name=YPD4_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12585;old_locus_tag=YPD4_2136
NC_017154.1	Protein Homology	CDS	2734723	2735181	.	-	0	ID=cds2469;Parent=gene2508;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	2735171	2735326	.	-	.	ID=gene2509;Name=YPD4_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12590
NC_017154.1	Protein Homology	CDS	2735171	2735326	.	-	0	ID=cds2470;Parent=gene2509;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	2735401	2736363	.	-	.	ID=gene2510;Name=YPD4_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12595;old_locus_tag=YPD4_2137
NC_017154.1	Protein Homology	CDS	2735401	2736363	.	-	0	ID=cds2471;Parent=gene2510;Dbxref=Genbank:WP_002210927.1;Name=WP_002210927.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=WP_002210927.1;transl_table=11
NC_017154.1	RefSeq	gene	2736947	2740603	.	+	.	ID=gene2511;Name=YPD4_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12600;old_locus_tag=YPD4_2138
NC_017154.1	Protein Homology	CDS	2736947	2740603	.	+	0	ID=cds2472;Parent=gene2511;Dbxref=Genbank:WP_002354074.1;Name=WP_002354074.1;gbkey=CDS;product=ribonuclease E;protein_id=WP_002354074.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2740621	2741949	.	+	.	ID=id196;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2740699	2741907	.	+	.	ID=gene2512;Name=YPD4_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12605;old_locus_tag=YPD4_2139
NC_017154.1	Protein Homology	CDS	2740699	2741907	.	+	0	ID=cds2473;Parent=gene2512;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	2742184	2742471	.	-	.	ID=gene2513;Name=YPD4_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12610
NC_017154.1	Protein Homology	CDS	2742184	2742471	.	-	0	ID=cds2474;Parent=gene2513;Dbxref=Genbank:WP_002213107.1;Name=WP_002213107.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002213107.1;transl_table=11
NC_017154.1	RefSeq	gene	2742706	2743752	.	+	.	ID=gene2514;Name=YPD4_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12615;old_locus_tag=YPD4_2140
NC_017154.1	Protein Homology	CDS	2742706	2743752	.	+	0	ID=cds2475;Parent=gene2514;Dbxref=Genbank:WP_002213109.1;Name=WP_002213109.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_002213109.1;transl_table=11
NC_017154.1	RefSeq	gene	2744065	2744310	.	+	.	ID=gene2515;Name=YPD4_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12620
NC_017154.1	Protein Homology	CDS	2744065	2744310	.	+	0	ID=cds2476;Parent=gene2515;Dbxref=Genbank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11
NC_017154.1	RefSeq	gene	2744509	2744637	.	-	.	ID=gene2516;Name=YPD4_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12625
NC_017154.1	Protein Homology	CDS	2744509	2744637	.	-	0	ID=cds2477;Parent=gene2516;Dbxref=Genbank:WP_002358565.1;Name=WP_002358565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002358565.1;transl_table=11
NC_017154.1	RefSeq	gene	2744816	2745112	.	+	.	ID=gene2517;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=YPD4_RS12630
NC_017154.1	Protein Homology	CDS	2744816	2745112	.	+	0	ID=cds2478;Parent=gene2517;Dbxref=Genbank:WP_002217041.1;Name=WP_002217041.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;product=biofilm formation regulatory protein BssS;protein_id=WP_002217041.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2745039	2746356	.	+	.	ID=id197;gbkey=repeat_region;gene=bssS
NC_017154.1	RefSeq	gene	2745075	2746283	.	-	.	ID=gene2518;Name=YPD4_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12635;old_locus_tag=YPD4_2141
NC_017154.1	Protein Homology	CDS	2745075	2746283	.	-	0	ID=cds2479;Parent=gene2518;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	2746644	2747759	.	+	.	ID=gene2519;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=YPD4_RS12640;old_locus_tag=YPD4_2142
NC_017154.1	Protein Homology	CDS	2746644	2747759	.	+	0	ID=cds2480;Parent=gene2519;Dbxref=Genbank:WP_002211850.1;Name=WP_002211850.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002211850.1;transl_table=11
NC_017154.1	RefSeq	gene	2748026	2748640	.	+	.	ID=gene2520;Name=YPD4_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12645;old_locus_tag=YPD4_2143
NC_017154.1	Protein Homology	CDS	2748026	2748640	.	+	0	ID=cds2481;Parent=gene2520;Dbxref=Genbank:WP_002211851.1;Name=WP_002211851.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211851.1;transl_table=11
NC_017154.1	RefSeq	gene	2749212	2750270	.	-	.	ID=gene2521;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=YPD4_RS12650;old_locus_tag=YPD4_2144
NC_017154.1	Protein Homology	CDS	2749212	2750270	.	-	0	ID=cds2482;Parent=gene2521;Dbxref=Genbank:WP_002211853.1;Name=WP_002211853.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=pheromone autoinducer 2 transporter;protein_id=WP_002211853.1;transl_table=11
NC_017154.1	RefSeq	gene	2750419	2751486	.	-	.	ID=gene2522;Name=YPD4_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12655;old_locus_tag=YPD4_2145
NC_017154.1	Protein Homology	CDS	2750419	2751486	.	-	0	ID=cds2483;Parent=gene2522;Dbxref=Genbank:WP_002211854.1;Name=WP_002211854.1;gbkey=CDS;product=sulfurtransferase;protein_id=WP_002211854.1;transl_table=11
NC_017154.1	RefSeq	gene	2751530	2751658	.	-	.	ID=gene2523;Name=YPD4_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12660
NC_017154.1	Protein Homology	CDS	2751530	2751658	.	-	0	ID=cds2484;Parent=gene2523;Dbxref=Genbank:WP_002211855.1;Name=WP_002211855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211855.1;transl_table=11
NC_017154.1	RefSeq	gene	2751845	2752009	.	-	.	ID=gene2524;Name=YPD4_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12665
NC_017154.1	Protein Homology	CDS	2751845	2752009	.	-	0	ID=cds2485;Parent=gene2524;Dbxref=Genbank:WP_002211856.1;Name=WP_002211856.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211856.1;transl_table=11
NC_017154.1	RefSeq	gene	2752339	2752500	.	-	.	ID=gene2525;Name=YPD4_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12670
NC_017154.1	Protein Homology	CDS	2752339	2752500	.	-	0	ID=cds2486;Parent=gene2525;Dbxref=Genbank:WP_002216894.1;Name=WP_002216894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216894.1;transl_table=11
NC_017154.1	RefSeq	gene	2752537	2753214	.	-	.	ID=gene2526;Name=YPD4_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12675;old_locus_tag=YPD4_2146
NC_017154.1	Protein Homology	CDS	2752537	2753214	.	-	0	ID=cds2487;Parent=gene2526;Dbxref=Genbank:WP_002211857.1;Name=WP_002211857.1;gbkey=CDS;product=transporter;protein_id=WP_002211857.1;transl_table=11
NC_017154.1	RefSeq	gene	2753645	2754289	.	+	.	ID=gene2527;Name=YPD4_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12680;old_locus_tag=YPD4_2147
NC_017154.1	Protein Homology	CDS	2753645	2754289	.	+	0	ID=cds2488;Parent=gene2527;Dbxref=Genbank:WP_002211858.1;Name=WP_002211858.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002211858.1;transl_table=11
NC_017154.1	RefSeq	gene	2754282	2755019	.	-	.	ID=gene2528;Name=YPD4_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12685;old_locus_tag=YPD4_2148
NC_017154.1	Protein Homology	CDS	2754282	2755019	.	-	0	ID=cds2489;Parent=gene2528;Dbxref=Genbank:WP_002211859.1;Name=WP_002211859.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211859.1;transl_table=11
NC_017154.1	RefSeq	gene	2755506	2756432	.	-	.	ID=gene2529;Name=YPD4_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12690;old_locus_tag=YPD4_2149
NC_017154.1	Protein Homology	CDS	2755506	2756432	.	-	0	ID=cds2490;Parent=gene2529;Dbxref=Genbank:WP_002211861.1;Name=WP_002211861.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211861.1;transl_table=11
NC_017154.1	RefSeq	gene	2756547	2756756	.	-	.	ID=gene2530;Name=YPD4_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12695
NC_017154.1	Protein Homology	CDS	2756547	2756756	.	-	0	ID=cds2491;Parent=gene2530;Dbxref=Genbank:WP_002216551.1;Name=WP_002216551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216551.1;transl_table=11
NC_017154.1	RefSeq	gene	2756880	2758238	.	+	.	ID=gene2531;Name=YPD4_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12700;old_locus_tag=YPD4_2150
NC_017154.1	Protein Homology	CDS	2756880	2758238	.	+	0	ID=cds2492;Parent=gene2531;Dbxref=Genbank:WP_002211863.1;Name=WP_002211863.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211863.1;transl_table=11
NC_017154.1	RefSeq	gene	2758285	2758788	.	+	.	ID=gene2532;Name=YPD4_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12705;old_locus_tag=YPD4_2151
NC_017154.1	Protein Homology	CDS	2758285	2758788	.	+	0	ID=cds2493;Parent=gene2532;Dbxref=Genbank:WP_002211864.1;Name=WP_002211864.1;gbkey=CDS;product=aldehyde-activating protein;protein_id=WP_002211864.1;transl_table=11
NC_017154.1	RefSeq	gene	2758799	2759818	.	+	.	ID=gene2533;Name=YPD4_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12710;old_locus_tag=YPD4_2152
NC_017154.1	Protein Homology	CDS	2758799	2759818	.	+	0	ID=cds2494;Parent=gene2533;Dbxref=Genbank:WP_002211865.1;Name=WP_002211865.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211865.1;transl_table=11
NC_017154.1	RefSeq	gene	2759896	2760450	.	-	.	ID=gene2534;Name=YPD4_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12715;old_locus_tag=YPD4_2153
NC_017154.1	Protein Homology	CDS	2759896	2760450	.	-	0	ID=cds2495;Parent=gene2534;Dbxref=Genbank:WP_002211866.1;Name=WP_002211866.1;gbkey=CDS;product=CRISPR-associated protein Csy4;protein_id=WP_002211866.1;transl_table=11
NC_017154.1	RefSeq	gene	2760461	2761465	.	-	.	ID=gene2535;Name=YPD4_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12720;old_locus_tag=YPD4_2154
NC_017154.1	Protein Homology	CDS	2760461	2761465	.	-	0	ID=cds2496;Parent=gene2535;Dbxref=Genbank:WP_002211867.1;Name=WP_002211867.1;gbkey=CDS;product=CRISPR-associated protein Cas5;protein_id=WP_002211867.1;transl_table=11
NC_017154.1	RefSeq	gene	2761483	2762434	.	-	.	ID=gene2536;Name=YPD4_RS12725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS12725;old_locus_tag=YPD4_2155;pseudo=true
NC_017154.1	Protein Homology	CDS	2761483	2762434	.	-	0	ID=cds2497;Parent=gene2536;exception=annotated by transcript or proteomic data;gbkey=CDS;product=CRISPR-associated protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2762431	2763777	.	-	.	ID=gene2537;Name=YPD4_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12730;old_locus_tag=YPD4_2156
NC_017154.1	Protein Homology	CDS	2762431	2763777	.	-	0	ID=cds2498;Parent=gene2537;Dbxref=Genbank:WP_002222491.1;Name=WP_002222491.1;gbkey=CDS;product=CRISPR type I-F system protein Csy1;protein_id=WP_002222491.1;transl_table=11
NC_017154.1	RefSeq	gene	2763815	2764069	.	-	.	ID=gene2538;Name=YPD4_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12735
NC_017154.1	Protein Homology	CDS	2763815	2764069	.	-	0	ID=cds2499;Parent=gene2538;Dbxref=Genbank:WP_002227892.1;Name=WP_002227892.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227892.1;transl_table=11
NC_017154.1	RefSeq	gene	2764185	2767472	.	-	.	ID=gene2539;Name=YPD4_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12740;old_locus_tag=YPD4_2157
NC_017154.1	Protein Homology	CDS	2764185	2767472	.	-	0	ID=cds2500;Parent=gene2539;Dbxref=Genbank:WP_002221142.1;Name=WP_002221142.1;gbkey=CDS;product=CRISPR-associated protein Cas3;protein_id=WP_002221142.1;transl_table=11
NC_017154.1	RefSeq	gene	2767469	2768449	.	-	.	ID=gene2540;Name=YPD4_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12745;old_locus_tag=YPD4_2158
NC_017154.1	Protein Homology	CDS	2767469	2768449	.	-	0	ID=cds2501;Parent=gene2540;Dbxref=Genbank:WP_002210191.1;Name=WP_002210191.1;gbkey=CDS;product=subtype I-F CRISPR-associated endonuclease Cas1;protein_id=WP_002210191.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2768809	2769256	.	+	.	ID=id198;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2769594	2770838	.	+	.	ID=gene2541;Name=YPD4_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12750;old_locus_tag=YPD4_2159
NC_017154.1	Protein Homology	CDS	2769594	2770838	.	+	0	ID=cds2502;Parent=gene2541;Dbxref=Genbank:WP_002210192.1;Name=WP_002210192.1;gbkey=CDS;product=miniconductance mechanosensitive channel;protein_id=WP_002210192.1;transl_table=11
NC_017154.1	RefSeq	gene	2771439	2772713	.	-	.	ID=gene2542;Name=YPD4_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12755;old_locus_tag=YPD4_2160
NC_017154.1	Protein Homology	CDS	2771439	2772713	.	-	0	ID=cds2503;Parent=gene2542;Dbxref=Genbank:WP_002210193.1;Name=WP_002210193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210193.1;transl_table=11
NC_017154.1	RefSeq	gene	2772752	2773867	.	-	.	ID=gene2543;Name=YPD4_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12760;old_locus_tag=YPD4_2161
NC_017154.1	Protein Homology	CDS	2772752	2773867	.	-	0	ID=cds2504;Parent=gene2543;Dbxref=Genbank:WP_002210194.1;Name=WP_002210194.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210194.1;transl_table=11
NC_017154.1	RefSeq	gene	2773990	2774928	.	-	.	ID=gene2544;Name=YPD4_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12765;old_locus_tag=YPD4_2162
NC_017154.1	Protein Homology	CDS	2773990	2774928	.	-	0	ID=cds2505;Parent=gene2544;Dbxref=Genbank:WP_002213840.1;Name=WP_002213840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213840.1;transl_table=11
NC_017154.1	RefSeq	gene	2774955	2776010	.	-	.	ID=gene2545;Name=YPD4_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12770;old_locus_tag=YPD4_2163
NC_017154.1	Protein Homology	CDS	2774955	2776010	.	-	0	ID=cds2506;Parent=gene2545;Dbxref=Genbank:WP_002210196.1;Name=WP_002210196.1;gbkey=CDS;product=glycosidase;protein_id=WP_002210196.1;transl_table=11
NC_017154.1	RefSeq	gene	2776157	2776981	.	-	.	ID=gene2546;Name=YPD4_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12775;old_locus_tag=YPD4_2164
NC_017154.1	Protein Homology	CDS	2776157	2776981	.	-	0	ID=cds2507;Parent=gene2546;Dbxref=Genbank:WP_002210197.1;Name=WP_002210197.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210197.1;transl_table=11
NC_017154.1	RefSeq	gene	2776982	2777857	.	-	.	ID=gene2547;Name=YPD4_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12780;old_locus_tag=YPD4_2165
NC_017154.1	Protein Homology	CDS	2776982	2777857	.	-	0	ID=cds2508;Parent=gene2547;Dbxref=Genbank:WP_002210198.1;Name=WP_002210198.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210198.1;transl_table=11
NC_017154.1	RefSeq	gene	2777966	2779252	.	-	.	ID=gene2548;Name=YPD4_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12785;old_locus_tag=YPD4_2166
NC_017154.1	Protein Homology	CDS	2777966	2779252	.	-	0	ID=cds2509;Parent=gene2548;Dbxref=Genbank:WP_002210199.1;Name=WP_002210199.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002210199.1;transl_table=11
NC_017154.1	RefSeq	gene	2779524	2780564	.	+	.	ID=gene2549;Name=YPD4_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12790;old_locus_tag=YPD4_2167
NC_017154.1	Protein Homology	CDS	2779524	2780564	.	+	0	ID=cds2510;Parent=gene2549;Dbxref=Genbank:WP_002210200.1;Name=WP_002210200.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210200.1;transl_table=11
NC_017154.1	RefSeq	gene	2780581	2781969	.	+	.	ID=gene2550;Name=YPD4_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12795;old_locus_tag=YPD4_2168
NC_017154.1	Protein Homology	CDS	2780581	2781969	.	+	0	ID=cds2511;Parent=gene2550;Dbxref=Genbank:WP_002210201.1;Name=WP_002210201.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002210201.1;transl_table=11
NC_017154.1	RefSeq	gene	2782069	2783148	.	+	.	ID=gene2551;Name=YPD4_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12800;old_locus_tag=YPD4_2169
NC_017154.1	Protein Homology	CDS	2782069	2783148	.	+	0	ID=cds2512;Parent=gene2551;Dbxref=Genbank:WP_002210202.1;Name=WP_002210202.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210202.1;transl_table=11
NC_017154.1	RefSeq	gene	2783413	2783865	.	-	.	ID=gene2552;Name=YPD4_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12805;old_locus_tag=YPD4_2170
NC_017154.1	Protein Homology	CDS	2783413	2783865	.	-	0	ID=cds2513;Parent=gene2552;Dbxref=Genbank:WP_002224304.1;Name=WP_002224304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224304.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2784055	2784223	.	+	.	ID=id199;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2784216	2784608	.	-	.	ID=gene2553;Name=YPD4_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12810;old_locus_tag=YPD4_2171
NC_017154.1	Protein Homology	CDS	2784216	2784608	.	-	0	ID=cds2514;Parent=gene2553;Dbxref=Genbank:WP_002213832.1;Name=WP_002213832.1;gbkey=CDS;product=adhesin;protein_id=WP_002213832.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2784377	2784627	.	+	.	ID=id200;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2784768	2785172	.	-	.	ID=gene2554;Name=YPD4_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12815
NC_017154.1	Protein Homology	CDS	2784768	2785172	.	-	0	ID=cds2515;Parent=gene2554;Dbxref=Genbank:WP_002213829.1;Name=WP_002213829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213829.1;transl_table=11
NC_017154.1	RefSeq	gene	2785314	2785481	.	-	.	ID=gene2555;Name=YPD4_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12820
NC_017154.1	Protein Homology	CDS	2785314	2785481	.	-	0	ID=cds2516;Parent=gene2555;Dbxref=Genbank:WP_002213827.1;Name=WP_002213827.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213827.1;transl_table=11
NC_017154.1	RefSeq	gene	2785684	2785881	.	-	.	ID=gene2556;Name=YPD4_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12825
NC_017154.1	Protein Homology	CDS	2785684	2785881	.	-	0	ID=cds2517;Parent=gene2556;Dbxref=Genbank:WP_002210208.1;Name=WP_002210208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210208.1;transl_table=11
NC_017154.1	RefSeq	gene	2785891	2787924	.	-	.	ID=gene2557;Name=YPD4_RS12830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS12830;pseudo=true
NC_017154.1	Protein Homology	CDS	2785891	2787924	.	-	0	ID=cds2518;Parent=gene2557;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemagglutinin;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	2786496	2787977	.	+	.	ID=id201;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2788100	2788447	.	-	.	ID=gene2558;Name=YPD4_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12835
NC_017154.1	Protein Homology	CDS	2788100	2788447	.	-	0	ID=cds2519;Parent=gene2558;Dbxref=Genbank:WP_016256369.1;Name=WP_016256369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256369.1;transl_table=11
NC_017154.1	RefSeq	gene	2788588	2788839	.	-	.	ID=gene2559;Name=YPD4_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12840
NC_017154.1	Protein Homology	CDS	2788588	2788839	.	-	0	ID=cds2520;Parent=gene2559;Dbxref=Genbank:WP_002213821.1;Name=WP_002213821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213821.1;transl_table=11
NC_017154.1	RefSeq	gene	2789084	2789593	.	-	.	ID=gene2560;Name=YPD4_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12845;old_locus_tag=YPD4_2175
NC_017154.1	Protein Homology	CDS	2789084	2789593	.	-	0	ID=cds2521;Parent=gene2560;Dbxref=Genbank:WP_002210211.1;Name=WP_002210211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210211.1;transl_table=11
NC_017154.1	RefSeq	gene	2789595	2797190	.	-	.	ID=gene2561;Name=YPD4_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12850;old_locus_tag=YPD4_2176
NC_017154.1	Protein Homology	CDS	2789595	2797190	.	-	0	ID=cds2522;Parent=gene2561;Dbxref=Genbank:WP_002213819.1;Name=WP_002213819.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002213819.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2790204	2791534	.	+	.	ID=id202;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2797346	2799034	.	-	.	ID=gene2562;Name=YPD4_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12855;old_locus_tag=YPD4_2177
NC_017154.1	Protein Homology	CDS	2797346	2799034	.	-	0	ID=cds2523;Parent=gene2562;Dbxref=Genbank:WP_002210212.1;Name=WP_002210212.1;gbkey=CDS;product=hemolysin secretion/activation protein%2C ShlB/FhaC/HecB family;protein_id=WP_002210212.1;transl_table=11
NC_017154.1	RefSeq	gene	2799687	2800652	.	-	.	ID=gene2563;Name=YPD4_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12860;old_locus_tag=YPD4_2178
NC_017154.1	Protein Homology	CDS	2799687	2800652	.	-	0	ID=cds2524;Parent=gene2563;Dbxref=Genbank:WP_002213817.1;Name=WP_002213817.1;gbkey=CDS;product=dioxygenase subunit beta;protein_id=WP_002213817.1;transl_table=11
NC_017154.1	RefSeq	gene	2800748	2801872	.	-	.	ID=gene2564;Name=YPD4_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12865;old_locus_tag=YPD4_2179
NC_017154.1	Protein Homology	CDS	2800748	2801872	.	-	0	ID=cds2525;Parent=gene2564;Dbxref=Genbank:WP_002213815.1;Name=WP_002213815.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002213815.1;transl_table=11
NC_017154.1	RefSeq	gene	2801989	2803635	.	-	.	ID=gene2565;Name=YPD4_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12870;old_locus_tag=YPD4_2180
NC_017154.1	Protein Homology	CDS	2801989	2803635	.	-	0	ID=cds2526;Parent=gene2565;Dbxref=Genbank:WP_002210215.1;Name=WP_002210215.1;Note=member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function;gbkey=CDS;product=betaine/carnitine/choline BCCT transporter;protein_id=WP_002210215.1;transl_table=11
NC_017154.1	RefSeq	gene	2804001	2804183	.	-	.	ID=gene2566;Name=YPD4_RS12875;gbkey=Gene;gene_biotype=other;locus_tag=YPD4_RS12875
NC_017154.1	RefSeq	repeat_region	2804042	2804217	.	+	.	ID=id203;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2804252	2805337	.	-	.	ID=gene2567;Name=YPD4_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12880;old_locus_tag=YPD4_2181
NC_017154.1	Protein Homology	CDS	2804252	2805337	.	-	0	ID=cds2527;Parent=gene2567;Dbxref=Genbank:WP_002210218.1;Name=WP_002210218.1;gbkey=CDS;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11
NC_017154.1	RefSeq	gene	2805440	2806381	.	+	.	ID=gene2568;Name=YPD4_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12885;old_locus_tag=YPD4_2182
NC_017154.1	Protein Homology	CDS	2805440	2806381	.	+	0	ID=cds2528;Parent=gene2568;Dbxref=Genbank:WP_002210219.1;Name=WP_002210219.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210219.1;transl_table=11
NC_017154.1	RefSeq	gene	2806628	2807632	.	+	.	ID=gene2569;Name=YPD4_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12890;old_locus_tag=YPD4_2183
NC_017154.1	Protein Homology	CDS	2806628	2807632	.	+	0	ID=cds2529;Parent=gene2569;Dbxref=Genbank:WP_002210220.1;Name=WP_002210220.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210220.1;transl_table=11
NC_017154.1	RefSeq	gene	2807765	2808757	.	-	.	ID=gene2570;Name=YPD4_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12895;old_locus_tag=YPD4_2184
NC_017154.1	Protein Homology	CDS	2807765	2808757	.	-	0	ID=cds2530;Parent=gene2570;Dbxref=Genbank:WP_002210221.1;Name=WP_002210221.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210221.1;transl_table=11
NC_017154.1	RefSeq	gene	2808754	2810244	.	-	.	ID=gene2571;Name=YPD4_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12900;old_locus_tag=YPD4_2185
NC_017154.1	Protein Homology	CDS	2808754	2810244	.	-	0	ID=cds2531;Parent=gene2571;Dbxref=Genbank:WP_002210222.1;Name=WP_002210222.1;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210222.1;transl_table=11
NC_017154.1	RefSeq	gene	2810284	2811201	.	-	.	ID=gene2572;Name=YPD4_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12905;old_locus_tag=YPD4_2186
NC_017154.1	Protein Homology	CDS	2810284	2811201	.	-	0	ID=cds2532;Parent=gene2572;Dbxref=Genbank:WP_002210223.1;Name=WP_002210223.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210223.1;transl_table=11
NC_017154.1	RefSeq	gene	2811376	2812443	.	-	.	ID=gene2573;Name=YPD4_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12910;old_locus_tag=YPD4_2187
NC_017154.1	Protein Homology	CDS	2811376	2812443	.	-	0	ID=cds2533;Parent=gene2573;Dbxref=Genbank:WP_002210224.1;Name=WP_002210224.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002210224.1;transl_table=11
NC_017154.1	RefSeq	gene	2813185	2813853	.	-	.	ID=gene2574;Name=YPD4_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12915;old_locus_tag=YPD4_2188
NC_017154.1	Protein Homology	CDS	2813185	2813853	.	-	0	ID=cds2534;Parent=gene2574;Dbxref=Genbank:WP_002210225.1;Name=WP_002210225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210225.1;transl_table=11
NC_017154.1	RefSeq	gene	2814049	2814591	.	-	.	ID=gene2575;Name=YPD4_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12920;old_locus_tag=YPD4_2189
NC_017154.1	Protein Homology	CDS	2814049	2814591	.	-	0	ID=cds2535;Parent=gene2575;Dbxref=Genbank:WP_002210227.1;Name=WP_002210227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210227.1;transl_table=11
NC_017154.1	RefSeq	gene	2814829	2815767	.	-	.	ID=gene2576;Name=YPD4_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12925;old_locus_tag=YPD4_2190
NC_017154.1	Protein Homology	CDS	2814829	2815767	.	-	0	ID=cds2536;Parent=gene2576;Dbxref=Genbank:WP_002210228.1;Name=WP_002210228.1;gbkey=CDS;product=cytochrome C551;protein_id=WP_002210228.1;transl_table=11
NC_017154.1	RefSeq	gene	2816083	2816607	.	-	.	ID=gene2577;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=YPD4_RS12930;old_locus_tag=YPD4_2191
NC_017154.1	Protein Homology	CDS	2816083	2816607	.	-	0	ID=cds2537;Parent=gene2577;Dbxref=Genbank:WP_002210229.1;Name=WP_002210229.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=WP_002210229.1;transl_table=11
NC_017154.1	RefSeq	gene	2817012	2817899	.	+	.	ID=gene2578;Name=YPD4_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12935;old_locus_tag=YPD4_2192
NC_017154.1	Protein Homology	CDS	2817012	2817899	.	+	0	ID=cds2538;Parent=gene2578;Dbxref=Genbank:WP_002213809.1;Name=WP_002213809.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002213809.1;transl_table=11
NC_017154.1	RefSeq	gene	2817915	2818412	.	+	.	ID=gene2579;Name=YPD4_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12940;old_locus_tag=YPD4_2193
NC_017154.1	Protein Homology	CDS	2817915	2818412	.	+	0	ID=cds2539;Parent=gene2579;Dbxref=Genbank:WP_002210231.1;Name=WP_002210231.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002210231.1;transl_table=11
NC_017154.1	RefSeq	gene	2818435	2819211	.	+	.	ID=gene2580;Name=YPD4_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12945;old_locus_tag=YPD4_2194
NC_017154.1	Protein Homology	CDS	2818435	2819211	.	+	0	ID=cds2540;Parent=gene2580;Dbxref=Genbank:WP_002210232.1;Name=WP_002210232.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=WP_002210232.1;transl_table=11
NC_017154.1	RefSeq	gene	2819468	2819971	.	+	.	ID=gene2581;Name=YPD4_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12950;old_locus_tag=YPD4_2195
NC_017154.1	Protein Homology	CDS	2819468	2819971	.	+	0	ID=cds2541;Parent=gene2581;Dbxref=Genbank:WP_002210233.1;Name=WP_002210233.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA protection during starvation protein;protein_id=WP_002210233.1;transl_table=11
NC_017154.1	RefSeq	gene	2820291	2821418	.	+	.	ID=gene2582;Name=YPD4_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12955;old_locus_tag=YPD4_2196
NC_017154.1	Protein Homology	CDS	2820291	2821418	.	+	0	ID=cds2542;Parent=gene2582;Dbxref=Genbank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;product=transporter;protein_id=WP_002210234.1;transl_table=11
NC_017154.1	RefSeq	gene	2821988	2822731	.	+	.	ID=gene2583;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YPD4_RS12960;old_locus_tag=YPD4_2197
NC_017154.1	Protein Homology	CDS	2821988	2822731	.	+	0	ID=cds2543;Parent=gene2583;Dbxref=Genbank:WP_002210235.1;Name=WP_002210235.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=glutamine ABC transporter substrate-binding protein;protein_id=WP_002210235.1;transl_table=11
NC_017154.1	RefSeq	gene	2822766	2823422	.	+	.	ID=gene2584;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=YPD4_RS12965;old_locus_tag=YPD4_2198
NC_017154.1	Protein Homology	CDS	2822766	2823422	.	+	0	ID=cds2544;Parent=gene2584;Dbxref=Genbank:WP_002210236.1;Name=WP_002210236.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=WP_002210236.1;transl_table=11
NC_017154.1	RefSeq	gene	2823419	2824141	.	+	.	ID=gene2585;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=YPD4_RS12970;old_locus_tag=YPD4_2199
NC_017154.1	Protein Homology	CDS	2823419	2824141	.	+	0	ID=cds2545;Parent=gene2585;Dbxref=Genbank:WP_002210237.1;Name=WP_002210237.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=WP_002210237.1;transl_table=11
NC_017154.1	RefSeq	gene	2824381	2825679	.	-	.	ID=gene2586;Name=YPD4_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12975;old_locus_tag=YPD4_2200
NC_017154.1	Protein Homology	CDS	2824381	2825679	.	-	0	ID=cds2546;Parent=gene2586;Dbxref=Genbank:WP_002210238.1;Name=WP_002210238.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210238.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2825651	2827607	.	+	.	ID=id204;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2825738	2826760	.	+	.	ID=gene2587;Name=YPD4_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12980;old_locus_tag=YPD4_2201
NC_017154.1	Protein Homology	CDS	2825738	2826760	.	+	0	ID=cds2547;Parent=gene2587;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	2826760	2827539	.	+	.	ID=gene2588;Name=YPD4_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12985;old_locus_tag=YPD4_2202
NC_017154.1	Protein Homology	CDS	2826760	2827539	.	+	0	ID=cds2548;Parent=gene2588;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	2827906	2828211	.	-	.	ID=gene2589;Name=YPD4_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12990;old_locus_tag=YPD4_2203
NC_017154.1	Protein Homology	CDS	2827906	2828211	.	-	0	ID=cds2549;Parent=gene2589;Dbxref=Genbank:WP_002215253.1;Name=WP_002215253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215253.1;transl_table=11
NC_017154.1	RefSeq	gene	2828308	2828709	.	-	.	ID=gene2590;Name=YPD4_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS12995;old_locus_tag=YPD4_2204
NC_017154.1	Protein Homology	CDS	2828308	2828709	.	-	0	ID=cds2550;Parent=gene2590;Dbxref=Genbank:WP_002209765.1;Name=WP_002209765.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209765.1;transl_table=11
NC_017154.1	RefSeq	gene	2828691	2830010	.	-	.	ID=gene2591;Name=YPD4_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13000;old_locus_tag=YPD4_2205
NC_017154.1	Protein Homology	CDS	2828691	2830010	.	-	0	ID=cds2551;Parent=gene2591;Dbxref=Genbank:WP_002209766.1;Name=WP_002209766.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209766.1;transl_table=11
NC_017154.1	RefSeq	gene	2830003	2831766	.	-	.	ID=gene2592;Name=YPD4_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13005;old_locus_tag=YPD4_2206
NC_017154.1	Protein Homology	CDS	2830003	2831766	.	-	0	ID=cds2552;Parent=gene2592;Dbxref=Genbank:WP_002209767.1;Name=WP_002209767.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002209767.1;transl_table=11
NC_017154.1	RefSeq	gene	2831763	2832395	.	-	.	ID=gene2593;Name=YPD4_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13010;old_locus_tag=YPD4_2207
NC_017154.1	Protein Homology	CDS	2831763	2832395	.	-	0	ID=cds2553;Parent=gene2593;Dbxref=Genbank:WP_002209768.1;Name=WP_002209768.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002209768.1;transl_table=11
NC_017154.1	RefSeq	gene	2832405	2833334	.	-	.	ID=gene2594;Name=YPD4_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13015;old_locus_tag=YPD4_2208
NC_017154.1	Protein Homology	CDS	2832405	2833334	.	-	0	ID=cds2554;Parent=gene2594;Dbxref=Genbank:WP_002209769.1;Name=WP_002209769.1;gbkey=CDS;product=phosphatidate cytidylyltransferase;protein_id=WP_002209769.1;transl_table=11
NC_017154.1	RefSeq	gene	2833327	2833929	.	-	.	ID=gene2595;Name=YPD4_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13020;old_locus_tag=YPD4_2209
NC_017154.1	Protein Homology	CDS	2833327	2833929	.	-	0	ID=cds2555;Parent=gene2595;Dbxref=Genbank:WP_002209770.1;Name=WP_002209770.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209770.1;transl_table=11
NC_017154.1	RefSeq	gene	2834156	2834332	.	-	.	ID=gene2596;Name=YPD4_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13025
NC_017154.1	Protein Homology	CDS	2834156	2834332	.	-	0	ID=cds2556;Parent=gene2596;Dbxref=Genbank:WP_002209771.1;Name=WP_002209771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209771.1;transl_table=11
NC_017154.1	RefSeq	gene	2834329	2834535	.	-	.	ID=gene2597;Name=YPD4_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13030
NC_017154.1	Protein Homology	CDS	2834329	2834535	.	-	0	ID=cds2557;Parent=gene2597;Dbxref=Genbank:WP_002354559.1;Name=WP_002354559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354559.1;transl_table=11
NC_017154.1	RefSeq	gene	2835108	2835446	.	+	.	ID=gene2598;Name=YPD4_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13035
NC_017154.1	Protein Homology	CDS	2835108	2835446	.	+	0	ID=cds2558;Parent=gene2598;Dbxref=Genbank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11
NC_017154.1	RefSeq	gene	2835431	2835544	.	+	.	ID=gene2599;Name=YPD4_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13040
NC_017154.1	Protein Homology	CDS	2835431	2835544	.	+	0	ID=cds2559;Parent=gene2599;Dbxref=Genbank:WP_002228357.1;Name=WP_002228357.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228357.1;transl_table=11
NC_017154.1	RefSeq	gene	2835582	2836079	.	+	.	ID=gene2600;Name=YPD4_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13045;old_locus_tag=YPD4_2210
NC_017154.1	Protein Homology	CDS	2835582	2836079	.	+	0	ID=cds2560;Parent=gene2600;Dbxref=Genbank:WP_002228356.1;Name=WP_002228356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228356.1;transl_table=11
NC_017154.1	RefSeq	gene	2836193	2836393	.	+	.	ID=gene2601;Name=YPD4_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13050
NC_017154.1	Protein Homology	CDS	2836193	2836393	.	+	0	ID=cds2561;Parent=gene2601;Dbxref=Genbank:WP_002215268.1;Name=WP_002215268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215268.1;transl_table=11
NC_017154.1	RefSeq	gene	2836652	2836834	.	+	.	ID=gene2602;Name=YPD4_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13055
NC_017154.1	Protein Homology	CDS	2836652	2836834	.	+	0	ID=cds2562;Parent=gene2602;Dbxref=Genbank:WP_002215270.1;Name=WP_002215270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215270.1;transl_table=11
NC_017154.1	RefSeq	gene	2836898	2836974	.	-	.	ID=gene2603;Name=YPD4_RS13060;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS13060;old_locus_tag=YPD4_t32
NC_017154.1	tRNAscan-SE	tRNA	2836898	2836974	.	-	.	ID=rna37;Parent=gene2603;anticodon=(pos:complement(2836938..2836940));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	tRNAscan-SE	exon	2836898	2836974	.	-	.	ID=id205;Parent=rna37;anticodon=(pos:complement(2836938..2836940));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	RefSeq	gene	2837189	2838055	.	+	.	ID=gene2604;Name=YPD4_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13065;old_locus_tag=YPD4_2211
NC_017154.1	Protein Homology	CDS	2837189	2838055	.	+	0	ID=cds2563;Parent=gene2604;Dbxref=Genbank:WP_002209774.1;Name=WP_002209774.1;gbkey=CDS;product=bifunctional protein FolD;protein_id=WP_002209774.1;transl_table=11
NC_017154.1	RefSeq	gene	2838070	2838282	.	+	.	ID=gene2605;Name=YPD4_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13070
NC_017154.1	Protein Homology	CDS	2838070	2838282	.	+	0	ID=cds2564;Parent=gene2605;Dbxref=Genbank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_002209775.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2838318	2839039	.	+	.	ID=id206;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2838429	2838887	.	-	.	ID=gene2606;Name=YPD4_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13075;old_locus_tag=YPD4_2212
NC_017154.1	Protein Homology	CDS	2838429	2838887	.	-	0	ID=cds2565;Parent=gene2606;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	2839063	2839689	.	-	.	ID=gene2607;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=YPD4_RS13080;old_locus_tag=YPD4_2213
NC_017154.1	Protein Homology	CDS	2839063	2839689	.	-	0	ID=cds2566;Parent=gene2607;Dbxref=Genbank:WP_002209776.1;Name=WP_002209776.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11
NC_017154.1	RefSeq	gene	2840086	2841129	.	+	.	ID=gene2608;Name=YPD4_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13085;old_locus_tag=YPD4_2214
NC_017154.1	Protein Homology	CDS	2840086	2841129	.	+	0	ID=cds2567;Parent=gene2608;Dbxref=Genbank:WP_002209777.1;Name=WP_002209777.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_002209777.1;transl_table=11
NC_017154.1	RefSeq	gene	2841244	2841882	.	+	.	ID=gene2609;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=YPD4_RS13090;old_locus_tag=YPD4_2215
NC_017154.1	Protein Homology	CDS	2841244	2841882	.	+	0	ID=cds2568;Parent=gene2609;Dbxref=Genbank:WP_002209778.1;Name=WP_002209778.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002209778.1;transl_table=11
NC_017154.1	RefSeq	gene	2842111	2842656	.	+	.	ID=gene2610;Name=YPD4_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13095;old_locus_tag=YPD4_2216
NC_017154.1	Protein Homology	CDS	2842111	2842656	.	+	0	ID=cds2569;Parent=gene2610;Dbxref=Genbank:WP_002209779.1;Name=WP_002209779.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11
NC_017154.1	RefSeq	gene	2842750	2843472	.	-	.	ID=gene2611;Name=YPD4_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13100;old_locus_tag=YPD4_2217
NC_017154.1	Protein Homology	CDS	2842750	2843472	.	-	0	ID=cds2570;Parent=gene2611;Dbxref=Genbank:WP_002214662.1;Name=WP_002214662.1;gbkey=CDS;product=N-methylation of lysine residues in flagellin;protein_id=WP_002214662.1;transl_table=11
NC_017154.1	RefSeq	gene	2843559	2843939	.	-	.	ID=gene2612;Name=YPD4_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13105;old_locus_tag=YPD4_2218
NC_017154.1	Protein Homology	CDS	2843559	2843939	.	-	0	ID=cds2571;Parent=gene2612;Dbxref=Genbank:WP_002214664.1;Name=WP_002214664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214664.1;transl_table=11
NC_017154.1	RefSeq	gene	2844167	2844979	.	-	.	ID=gene2613;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=YPD4_RS13110;old_locus_tag=YPD4_2219
NC_017154.1	Protein Homology	CDS	2844167	2844979	.	-	0	ID=cds2572;Parent=gene2613;Dbxref=Genbank:WP_002209780.1;Name=WP_002209780.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate import ATP-binding protein PstB 1;protein_id=WP_002209780.1;transl_table=11
NC_017154.1	RefSeq	gene	2845007	2846659	.	-	.	ID=gene2614;Name=YPD4_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13115;old_locus_tag=YPD4_2220
NC_017154.1	Protein Homology	CDS	2845007	2846659	.	-	0	ID=cds2573;Parent=gene2614;Dbxref=Genbank:WP_032465662.1;Name=WP_032465662.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_032465662.1;transl_table=11
NC_017154.1	RefSeq	gene	2846719	2848950	.	-	.	ID=gene2615;Name=YPD4_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13120;old_locus_tag=YPD4_2221
NC_017154.1	Protein Homology	CDS	2846719	2848950	.	-	0	ID=cds2574;Parent=gene2615;Dbxref=Genbank:WP_002214670.1;Name=WP_002214670.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_002214670.1;transl_table=11
NC_017154.1	RefSeq	gene	2849221	2851284	.	+	.	ID=gene2616;Name=YPD4_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13125;old_locus_tag=YPD4_2222
NC_017154.1	Protein Homology	CDS	2849221	2851284	.	+	0	ID=cds2575;Parent=gene2616;Dbxref=Genbank:WP_002209782.1;Name=WP_002209782.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_002209782.1;transl_table=11
NC_017154.1	RefSeq	gene	2851295	2852854	.	+	.	ID=gene2617;Name=YPD4_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13130;old_locus_tag=YPD4_2223
NC_017154.1	Protein Homology	CDS	2851295	2852854	.	+	0	ID=cds2576;Parent=gene2617;Dbxref=Genbank:WP_002209783.1;Name=WP_002209783.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_002209783.1;transl_table=11
NC_017154.1	RefSeq	gene	2852990	2853178	.	+	.	ID=gene2618;Name=YPD4_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13135
NC_017154.1	Protein Homology	CDS	2852990	2853178	.	+	0	ID=cds2577;Parent=gene2618;Dbxref=Genbank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303868.1;transl_table=11
NC_017154.1	RefSeq	gene	2853230	2854705	.	+	.	ID=gene2619;Name=YPD4_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13140;old_locus_tag=YPD4_2224
NC_017154.1	Protein Homology	CDS	2853230	2854705	.	+	0	ID=cds2578;Parent=gene2619;Dbxref=Genbank:WP_002209784.1;Name=WP_002209784.1;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002209784.1;transl_table=11
NC_017154.1	RefSeq	gene	2854845	2856197	.	+	.	ID=gene2620;Name=YPD4_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13145;old_locus_tag=YPD4_2225
NC_017154.1	Protein Homology	CDS	2854845	2856197	.	+	0	ID=cds2579;Parent=gene2620;Dbxref=Genbank:WP_002209785.1;Name=WP_002209785.1;gbkey=CDS;product=chaperone;protein_id=WP_002209785.1;transl_table=11
NC_017154.1	RefSeq	gene	2856469	2857318	.	-	.	ID=gene2621;Name=YPD4_RS13150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS13150;pseudo=true
NC_017154.1	Protein Homology	CDS	2856469	2857318	.	-	0	ID=cds2580;Parent=gene2621;exception=annotated by transcript or proteomic data;gbkey=CDS;product=polyamine ABC transporter permease;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2857380	2858645	.	-	.	ID=gene2622;Name=YPD4_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13155;old_locus_tag=YPD4_2228
NC_017154.1	Protein Homology	CDS	2857380	2858645	.	-	0	ID=cds2581;Parent=gene2622;Dbxref=Genbank:WP_002209787.1;Name=WP_002209787.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209787.1;transl_table=11
NC_017154.1	RefSeq	gene	2858692	2859720	.	-	.	ID=gene2623;Name=YPD4_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13160;old_locus_tag=YPD4_2229
NC_017154.1	Protein Homology	CDS	2858692	2859720	.	-	0	ID=cds2582;Parent=gene2623;Dbxref=Genbank:WP_002209788.1;Name=WP_002209788.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_002209788.1;transl_table=11
NC_017154.1	RefSeq	gene	2859773	2861062	.	-	.	ID=gene2624;Name=YPD4_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13165;old_locus_tag=YPD4_2230
NC_017154.1	Protein Homology	CDS	2859773	2861062	.	-	0	ID=cds2583;Parent=gene2624;Dbxref=Genbank:WP_002209789.1;Name=WP_002209789.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=WP_002209789.1;transl_table=11
NC_017154.1	RefSeq	gene	2861244	2862749	.	+	.	ID=gene2625;Name=YPD4_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13170;old_locus_tag=YPD4_2231
NC_017154.1	Protein Homology	CDS	2861244	2862749	.	+	0	ID=cds2584;Parent=gene2625;Dbxref=Genbank:WP_002209790.1;Name=WP_002209790.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002209790.1;transl_table=11
NC_017154.1	RefSeq	gene	2863132	2864218	.	+	.	ID=gene2626;Name=YPD4_RS13175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS13175;pseudo=true
NC_017154.1	Protein Homology	CDS	2863132	2864218	.	+	0	ID=cds2585;Parent=gene2626;exception=annotated by transcript or proteomic data;gbkey=CDS;product=spermidine/putrescine ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2864582	2865916	.	+	.	ID=gene2627;Name=YPD4_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13180;old_locus_tag=YPD4_2233
NC_017154.1	Protein Homology	CDS	2864582	2865916	.	+	0	ID=cds2586;Parent=gene2627;Dbxref=Genbank:WP_002214676.1;Name=WP_002214676.1;gbkey=CDS;product=multidrug resistance protein MdtA;protein_id=WP_002214676.1;transl_table=11
NC_017154.1	RefSeq	gene	2865916	2869074	.	+	.	ID=gene2628;Name=YPD4_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13185;old_locus_tag=YPD4_2234
NC_017154.1	Protein Homology	CDS	2865916	2869074	.	+	0	ID=cds2587;Parent=gene2628;Dbxref=Genbank:WP_002209793.1;Name=WP_002209793.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtB;protein_id=WP_002209793.1;transl_table=11
NC_017154.1	RefSeq	gene	2869071	2872145	.	+	.	ID=gene2629;Name=YPD4_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13190;old_locus_tag=YPD4_2235
NC_017154.1	Protein Homology	CDS	2869071	2872145	.	+	0	ID=cds2588;Parent=gene2629;Dbxref=Genbank:WP_002209794.1;Name=WP_002209794.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtC;protein_id=WP_002209794.1;transl_table=11
NC_017154.1	RefSeq	gene	2872179	2873576	.	+	.	ID=gene2630;Name=YPD4_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13195;old_locus_tag=YPD4_2236
NC_017154.1	Protein Homology	CDS	2872179	2873576	.	+	0	ID=cds2589;Parent=gene2630;Dbxref=Genbank:WP_002209795.1;Name=WP_002209795.1;gbkey=CDS;product=transporter;protein_id=WP_002209795.1;transl_table=11
NC_017154.1	RefSeq	gene	2873607	2874722	.	+	.	ID=gene2631;Name=YPD4_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13200;old_locus_tag=YPD4_2237
NC_017154.1	Protein Homology	CDS	2873607	2874722	.	+	0	ID=cds2590;Parent=gene2631;Dbxref=Genbank:WP_002228395.1;Name=WP_002228395.1;gbkey=CDS;product=signal transduction histidine kinase;protein_id=WP_002228395.1;transl_table=11
NC_017154.1	RefSeq	gene	2874734	2874991	.	+	.	ID=gene2632;Name=YPD4_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13205
NC_017154.1	Protein Homology	CDS	2874734	2874991	.	+	0	ID=cds2591;Parent=gene2632;Dbxref=Genbank:WP_002228394.1;Name=WP_002228394.1;gbkey=CDS;product=ATPase;protein_id=WP_002228394.1;transl_table=11
NC_017154.1	RefSeq	gene	2875001	2875720	.	+	.	ID=gene2633;Name=YPD4_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13210;old_locus_tag=YPD4_2238
NC_017154.1	Protein Homology	CDS	2875001	2875720	.	+	0	ID=cds2592;Parent=gene2633;Dbxref=Genbank:WP_002209796.1;Name=WP_002209796.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209796.1;transl_table=11
NC_017154.1	RefSeq	gene	2875857	2876195	.	+	.	ID=gene2634;Name=YPD4_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13215;old_locus_tag=YPD4_2239
NC_017154.1	Protein Homology	CDS	2875857	2876195	.	+	0	ID=cds2593;Parent=gene2634;Dbxref=Genbank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209797.1;transl_table=11
NC_017154.1	RefSeq	gene	2876470	2877864	.	+	.	ID=gene2635;Name=YPD4_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13220;old_locus_tag=YPD4_2240
NC_017154.1	Protein Homology	CDS	2876470	2877864	.	+	0	ID=cds2594;Parent=gene2635;Dbxref=Genbank:WP_002209798.1;Name=WP_002209798.1;gbkey=CDS;product=protease;protein_id=WP_002209798.1;transl_table=11
NC_017154.1	RefSeq	gene	2878500	2879390	.	+	.	ID=gene2636;Name=YPD4_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13225;old_locus_tag=YPD4_2241
NC_017154.1	Protein Homology	CDS	2878500	2879390	.	+	0	ID=cds2595;Parent=gene2636;Dbxref=Genbank:WP_002209799.1;Name=WP_002209799.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;protein_id=WP_002209799.1;transl_table=11
NC_017154.1	RefSeq	gene	2879677	2880186	.	-	.	ID=gene2637;Name=YPD4_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13230;old_locus_tag=YPD4_2242
NC_017154.1	Protein Homology	CDS	2879677	2880186	.	-	0	ID=cds2596;Parent=gene2637;Dbxref=Genbank:WP_002209800.1;Name=WP_002209800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209800.1;transl_table=11
NC_017154.1	RefSeq	gene	2880559	2881305	.	+	.	ID=gene2638;Name=YPD4_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13235;old_locus_tag=YPD4_2243
NC_017154.1	Protein Homology	CDS	2880559	2881305	.	+	0	ID=cds2597;Parent=gene2638;Dbxref=Genbank:WP_002232352.1;Name=WP_002232352.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002232352.1;transl_table=11
NC_017154.1	RefSeq	gene	2881367	2882167	.	-	.	ID=gene2639;Name=YPD4_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13240;old_locus_tag=YPD4_2244
NC_017154.1	Protein Homology	CDS	2881367	2882167	.	-	0	ID=cds2598;Parent=gene2639;Dbxref=Genbank:WP_002209801.1;Name=WP_002209801.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase;protein_id=WP_002209801.1;transl_table=11
NC_017154.1	RefSeq	gene	2882689	2883156	.	+	.	ID=gene2640;Name=YPD4_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13245;old_locus_tag=YPD4_2245
NC_017154.1	Protein Homology	CDS	2882689	2883156	.	+	0	ID=cds2599;Parent=gene2640;Dbxref=Genbank:WP_002209803.1;Name=WP_002209803.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209803.1;transl_table=11
NC_017154.1	RefSeq	gene	2883215	2883493	.	+	.	ID=gene2641;Name=YPD4_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13250
NC_017154.1	Protein Homology	CDS	2883215	2883493	.	+	0	ID=cds2600;Parent=gene2641;Dbxref=Genbank:WP_002209804.1;Name=WP_002209804.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209804.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2883468	2884787	.	+	.	ID=id207;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2883505	2884713	.	-	.	ID=gene2642;Name=YPD4_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13255;old_locus_tag=YPD4_2246
NC_017154.1	Protein Homology	CDS	2883505	2884713	.	-	0	ID=cds2601;Parent=gene2642;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	2884804	2885439	.	+	.	ID=gene2643;Name=YPD4_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13260;old_locus_tag=YPD4_2247
NC_017154.1	Protein Homology	CDS	2884804	2885439	.	+	0	ID=cds2602;Parent=gene2643;Dbxref=Genbank:WP_002209805.1;Name=WP_002209805.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209805.1;transl_table=11
NC_017154.1	RefSeq	gene	2885436	2885831	.	+	.	ID=gene2644;Name=YPD4_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13265;old_locus_tag=YPD4_2248
NC_017154.1	Protein Homology	CDS	2885436	2885831	.	+	0	ID=cds2603;Parent=gene2644;Dbxref=Genbank:WP_002216980.1;Name=WP_002216980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216980.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2885730	2885875	.	+	.	ID=id208;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2885895	2886290	.	+	.	ID=gene2645;Name=YPD4_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13270
NC_017154.1	Protein Homology	CDS	2885895	2886290	.	+	0	ID=cds2604;Parent=gene2645;Dbxref=Genbank:WP_002216979.1;Name=WP_002216979.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216979.1;transl_table=11
NC_017154.1	RefSeq	gene	2886352	2886747	.	+	.	ID=gene2646;Name=YPD4_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13275
NC_017154.1	Protein Homology	CDS	2886352	2886747	.	+	0	ID=cds2605;Parent=gene2646;Dbxref=Genbank:WP_002415472.1;Name=WP_002415472.1;gbkey=CDS;product=membrane protein;protein_id=WP_002415472.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2886646	2886791	.	+	.	ID=id209;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2886811	2887209	.	+	.	ID=gene2647;Name=YPD4_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13280;old_locus_tag=YPD4_2249
NC_017154.1	Protein Homology	CDS	2886811	2887209	.	+	0	ID=cds2606;Parent=gene2647;Dbxref=Genbank:WP_002216975.1;Name=WP_002216975.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216975.1;transl_table=11
NC_017154.1	RefSeq	gene	2887233	2887712	.	+	.	ID=gene2648;Name=YPD4_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13285;old_locus_tag=YPD4_2250
NC_017154.1	Protein Homology	CDS	2887233	2887712	.	+	0	ID=cds2607;Parent=gene2648;Dbxref=Genbank:WP_002209806.1;Name=WP_002209806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209806.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2887761	2888483	.	+	.	ID=id210;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2887872	2888330	.	-	.	ID=gene2649;Name=YPD4_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13290;old_locus_tag=YPD4_2251
NC_017154.1	Protein Homology	CDS	2887872	2888330	.	-	0	ID=cds2608;Parent=gene2649;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	2888320	2888493	.	-	.	ID=gene2650;Name=YPD4_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13295
NC_017154.1	Protein Homology	CDS	2888320	2888493	.	-	0	ID=cds2609;Parent=gene2650;Dbxref=Genbank:WP_025470750.1;Name=WP_025470750.1;gbkey=CDS;product=transposase;protein_id=WP_025470750.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2888504	2888636	.	+	.	ID=id211;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2888705	2890282	.	-	.	ID=gene2651;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=YPD4_RS13300;old_locus_tag=YPD4_2252
NC_017154.1	Protein Homology	CDS	2888705	2890282	.	-	0	ID=cds2610;Parent=gene2651;Dbxref=Genbank:WP_002209807.1;Name=WP_002209807.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase [glutamine-hydrolyzing];protein_id=WP_002209807.1;transl_table=11
NC_017154.1	RefSeq	gene	2890265	2890390	.	+	.	ID=gene2652;Name=YPD4_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13305
NC_017154.1	Protein Homology	CDS	2890265	2890390	.	+	0	ID=cds2611;Parent=gene2652;Dbxref=Genbank:WP_002209808.1;Name=WP_002209808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209808.1;transl_table=11
NC_017154.1	RefSeq	gene	2890462	2891925	.	-	.	ID=gene2653;Name=YPD4_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13310;old_locus_tag=YPD4_2253
NC_017154.1	Protein Homology	CDS	2890462	2891925	.	-	0	ID=cds2612;Parent=gene2653;Dbxref=Genbank:WP_002227862.1;Name=WP_002227862.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_002227862.1;transl_table=11
NC_017154.1	RefSeq	gene	2892095	2893474	.	+	.	ID=gene2654;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=YPD4_RS13315;old_locus_tag=YPD4_2254
NC_017154.1	Protein Homology	CDS	2892095	2893474	.	+	0	ID=cds2613;Parent=gene2654;Dbxref=Genbank:WP_002209810.1;Name=WP_002209810.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease 7 large subunit;protein_id=WP_002209810.1;transl_table=11
NC_017154.1	RefSeq	gene	2893575	2893799	.	-	.	ID=gene2655;Name=YPD4_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13320
NC_017154.1	Protein Homology	CDS	2893575	2893799	.	-	0	ID=cds2614;Parent=gene2655;Dbxref=Genbank:WP_002209811.1;Name=WP_002209811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209811.1;transl_table=11
NC_017154.1	RefSeq	gene	2893848	2894804	.	-	.	ID=gene2656;Name=YPD4_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13325;old_locus_tag=YPD4_2255
NC_017154.1	Protein Homology	CDS	2893848	2894804	.	-	0	ID=cds2615;Parent=gene2656;Dbxref=Genbank:WP_002209812.1;Name=WP_002209812.1;gbkey=CDS;product=transporter;protein_id=WP_002209812.1;transl_table=11
NC_017154.1	RefSeq	gene	2895151	2896638	.	-	.	ID=gene2657;Name=YPD4_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13330;old_locus_tag=YPD4_2256
NC_017154.1	Protein Homology	CDS	2895151	2896638	.	-	0	ID=cds2616;Parent=gene2657;Dbxref=Genbank:WP_002209813.1;Name=WP_002209813.1;gbkey=CDS;product=GTPase Der;protein_id=WP_002209813.1;transl_table=11
NC_017154.1	RefSeq	gene	2896786	2897967	.	-	.	ID=gene2658;Name=YPD4_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13335;old_locus_tag=YPD4_2257
NC_017154.1	Protein Homology	CDS	2896786	2897967	.	-	0	ID=cds2617;Parent=gene2658;Dbxref=Genbank:WP_002209814.1;Name=WP_002209814.1;gbkey=CDS;product=outer membrane protein assembly factor BamB;protein_id=WP_002209814.1;transl_table=11
NC_017154.1	RefSeq	gene	2897979	2898614	.	-	.	ID=gene2659;Name=YPD4_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13340;old_locus_tag=YPD4_2258
NC_017154.1	Protein Homology	CDS	2897979	2898614	.	-	0	ID=cds2618;Parent=gene2659;Dbxref=Genbank:WP_002209815.1;Name=WP_002209815.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209815.1;transl_table=11
NC_017154.1	RefSeq	gene	2898628	2899902	.	-	.	ID=gene2660;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=YPD4_RS13345;old_locus_tag=YPD4_2259
NC_017154.1	Protein Homology	CDS	2898628	2899902	.	-	0	ID=cds2619;Parent=gene2660;Dbxref=Genbank:WP_002209816.1;Name=WP_002209816.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=WP_002209816.1;transl_table=11
NC_017154.1	RefSeq	gene	2900111	2901238	.	-	.	ID=gene2661;Name=YPD4_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13350;old_locus_tag=YPD4_2260
NC_017154.1	Protein Homology	CDS	2900111	2901238	.	-	0	ID=cds2620;Parent=gene2661;Dbxref=Genbank:WP_002209817.1;Name=WP_002209817.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=WP_002209817.1;transl_table=11
NC_017154.1	RefSeq	gene	2901300	2902337	.	-	.	ID=gene2662;Name=YPD4_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13355;old_locus_tag=YPD4_2261
NC_017154.1	Protein Homology	CDS	2901300	2902337	.	-	0	ID=cds2621;Parent=gene2662;Dbxref=Genbank:WP_002209818.1;Name=WP_002209818.1;gbkey=CDS;product=cytoskeleton protein RodZ;protein_id=WP_002209818.1;transl_table=11
NC_017154.1	RefSeq	gene	2902327	2903077	.	-	.	ID=gene2663;Name=YPD4_RS13360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS13360;pseudo=true
NC_017154.1	Protein Homology	CDS	2902327	2903077	.	-	0	ID=cds2622;Parent=gene2663;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pilus assembly protein PilW;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2903231	2904427	.	-	.	ID=gene2664;Name=YPD4_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13365;old_locus_tag=YPD4_2263
NC_017154.1	Protein Homology	CDS	2903231	2904427	.	-	0	ID=cds2623;Parent=gene2664;Dbxref=Genbank:WP_002209820.1;Name=WP_002209820.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_002209820.1;transl_table=11
NC_017154.1	RefSeq	gene	2904689	2905117	.	-	.	ID=gene2665;Name=YPD4_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13370;old_locus_tag=YPD4_2264
NC_017154.1	Protein Homology	CDS	2904689	2905117	.	-	0	ID=cds2624;Parent=gene2665;Dbxref=Genbank:WP_002209821.1;Name=WP_002209821.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_002209821.1;transl_table=11
NC_017154.1	RefSeq	gene	2905444	2907864	.	-	.	ID=gene2666;Name=YPD4_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13375;old_locus_tag=YPD4_2265
NC_017154.1	Protein Homology	CDS	2905444	2907864	.	-	0	ID=cds2625;Parent=gene2666;Dbxref=Genbank:WP_002215515.1;Name=WP_002215515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215515.1;transl_table=11
NC_017154.1	RefSeq	gene	2908039	2908296	.	+	.	ID=gene2667;Name=YPD4_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13380
NC_017154.1	Protein Homology	CDS	2908039	2908296	.	+	0	ID=cds2626;Parent=gene2667;Dbxref=Genbank:WP_002215513.1;Name=WP_002215513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215513.1;transl_table=11
NC_017154.1	RefSeq	gene	2908811	2912956	.	+	.	ID=gene2668;Name=YPD4_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13385;old_locus_tag=YPD4_2266
NC_017154.1	Protein Homology	CDS	2908811	2912956	.	+	0	ID=cds2627;Parent=gene2668;Dbxref=Genbank:WP_002215510.1;Name=WP_002215510.1;gbkey=CDS;product=autotransporter;protein_id=WP_002215510.1;transl_table=11
NC_017154.1	RefSeq	gene	2913514	2916672	.	+	.	ID=gene2669;Name=YPD4_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13390;old_locus_tag=YPD4_2267
NC_017154.1	Protein Homology	CDS	2913514	2916672	.	+	0	ID=cds2628;Parent=gene2669;Dbxref=Genbank:WP_002215508.1;Name=WP_002215508.1;gbkey=CDS;product=pertactin;protein_id=WP_002215508.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2915133	2915282	.	+	.	ID=id212;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	2915295	2915444	.	+	.	ID=id213;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2916638	2916958	.	+	.	ID=gene2670;Name=YPD4_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13395;old_locus_tag=YPD4_2268
NC_017154.1	Protein Homology	CDS	2916638	2916958	.	+	0	ID=cds2629;Parent=gene2670;Dbxref=Genbank:WP_002215505.1;Name=WP_002215505.1;gbkey=CDS;product=autotransporter;protein_id=WP_002215505.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2917090	2917260	.	+	.	ID=id214;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2917296	2918249	.	-	.	ID=gene2671;Name=YPD4_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13400;old_locus_tag=YPD4_2269
NC_017154.1	Protein Homology	CDS	2917296	2918249	.	-	0	ID=cds2630;Parent=gene2671;Dbxref=Genbank:WP_002209828.1;Name=WP_002209828.1;gbkey=CDS;product=endopeptidase IV;protein_id=WP_002209828.1;transl_table=11
NC_017154.1	RefSeq	gene	2918328	2919626	.	-	.	ID=gene2672;Name=YPD4_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13405;old_locus_tag=YPD4_2270
NC_017154.1	Protein Homology	CDS	2918328	2919626	.	-	0	ID=cds2631;Parent=gene2672;Dbxref=Genbank:WP_002209829.1;Name=WP_002209829.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=peptidase B;protein_id=WP_002209829.1;transl_table=11
NC_017154.1	RefSeq	gene	2919766	2919966	.	-	.	ID=gene2673;Name=YPD4_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13410
NC_017154.1	Protein Homology	CDS	2919766	2919966	.	-	0	ID=cds2632;Parent=gene2673;Dbxref=Genbank:WP_002209830.1;Name=WP_002209830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209830.1;transl_table=11
NC_017154.1	RefSeq	gene	2919996	2920331	.	-	.	ID=gene2674;Name=YPD4_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13415;old_locus_tag=YPD4_2271
NC_017154.1	Protein Homology	CDS	2919996	2920331	.	-	0	ID=cds2633;Parent=gene2674;Dbxref=Genbank:WP_002209831.1;Name=WP_002209831.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002209831.1;transl_table=11
NC_017154.1	RefSeq	gene	2920334	2922124	.	-	.	ID=gene2675;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=YPD4_RS13420;old_locus_tag=YPD4_2272
NC_017154.1	Protein Homology	CDS	2920334	2922124	.	-	0	ID=cds2634;Parent=gene2675;Dbxref=Genbank:WP_042468833.1;Name=WP_042468833.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=WP_042468833.1;transl_table=11
NC_017154.1	RefSeq	gene	2922529	2923053	.	-	.	ID=gene2676;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=YPD4_RS13425;old_locus_tag=YPD4_2273
NC_017154.1	Protein Homology	CDS	2922529	2923053	.	-	0	ID=cds2635;Parent=gene2676;Dbxref=Genbank:WP_002209833.1;Name=WP_002209833.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone protein HscB;protein_id=WP_002209833.1;transl_table=11
NC_017154.1	RefSeq	gene	2923164	2923487	.	-	.	ID=gene2677;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=YPD4_RS13430;old_locus_tag=YPD4_2274
NC_017154.1	Protein Homology	CDS	2923164	2923487	.	-	0	ID=cds2636;Parent=gene2677;Dbxref=Genbank:WP_002209834.1;Name=WP_002209834.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-binding protein;protein_id=WP_002209834.1;transl_table=11
NC_017154.1	RefSeq	gene	2923757	2924143	.	-	.	ID=gene2678;Name=YPD4_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13435;old_locus_tag=YPD4_2275
NC_017154.1	Protein Homology	CDS	2923757	2924143	.	-	0	ID=cds2637;Parent=gene2678;Dbxref=Genbank:WP_002209835.1;Name=WP_002209835.1;gbkey=CDS;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002209835.1;transl_table=11
NC_017154.1	RefSeq	gene	2924174	2925404	.	-	.	ID=gene2679;Name=YPD4_RS13440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS13440;pseudo=true
NC_017154.1	Protein Homology	CDS	2924174	2925404	.	-	0	ID=cds2638;Parent=gene2679;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cysteine desulfurase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2925458	2925952	.	-	.	ID=gene2680;Name=YPD4_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13445;old_locus_tag=YPD4_2278
NC_017154.1	Protein Homology	CDS	2925458	2925952	.	-	0	ID=cds2639;Parent=gene2680;Dbxref=Genbank:WP_002222202.1;Name=WP_002222202.1;gbkey=CDS;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002222202.1;transl_table=11
NC_017154.1	RefSeq	gene	2926108	2926881	.	-	.	ID=gene2681;Name=YPD4_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13450;old_locus_tag=YPD4_2279
NC_017154.1	Protein Homology	CDS	2926108	2926881	.	-	0	ID=cds2640;Parent=gene2681;Dbxref=Genbank:WP_002217034.1;Name=WP_002217034.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11
NC_017154.1	RefSeq	gene	2927000	2927803	.	+	.	ID=gene2682;Name=YPD4_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13455;old_locus_tag=YPD4_2280
NC_017154.1	Protein Homology	CDS	2927000	2927803	.	+	0	ID=cds2641;Parent=gene2682;Dbxref=Genbank:WP_002213305.1;Name=WP_002213305.1;gbkey=CDS;product=inositol monophosphatase;protein_id=WP_002213305.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2927853	2928577	.	+	.	ID=id215;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2928007	2928465	.	+	.	ID=gene2683;Name=YPD4_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13460;old_locus_tag=YPD4_2281
NC_017154.1	Protein Homology	CDS	2928007	2928465	.	+	0	ID=cds2642;Parent=gene2683;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	2928612	2929634	.	-	.	ID=gene2684;Name=YPD4_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13465;old_locus_tag=YPD4_2282
NC_017154.1	Protein Homology	CDS	2928612	2929634	.	-	0	ID=cds2643;Parent=gene2684;Dbxref=Genbank:WP_002213308.1;Name=WP_002213308.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002213308.1;transl_table=11
NC_017154.1	RefSeq	gene	2929625	2930299	.	-	.	ID=gene2685;Name=YPD4_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13470;old_locus_tag=YPD4_2283
NC_017154.1	Protein Homology	CDS	2929625	2930299	.	-	0	ID=cds2644;Parent=gene2685;Dbxref=Genbank:WP_002213310.1;Name=WP_002213310.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213310.1;transl_table=11
NC_017154.1	RefSeq	gene	2930441	2931802	.	+	.	ID=gene2686;Name=YPD4_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13475;old_locus_tag=YPD4_2284
NC_017154.1	Protein Homology	CDS	2930441	2931802	.	+	0	ID=cds2645;Parent=gene2686;Dbxref=Genbank:WP_002213314.1;Name=WP_002213314.1;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=WP_002213314.1;transl_table=11
NC_017154.1	RefSeq	gene	2931799	2932957	.	-	.	ID=gene2687;Name=YPD4_RS13480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS13480;pseudo=true
NC_017154.1	Protein Homology	CDS	2931799	2932957	.	-	0	ID=cds2646;Parent=gene2687;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;exception=annotated by transcript or proteomic data;gbkey=CDS;product=3-phenylpropionic acid transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2933309	2933848	.	-	.	ID=gene2688;Name=YPD4_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13485;old_locus_tag=YPD4_2287
NC_017154.1	Protein Homology	CDS	2933309	2933848	.	-	0	ID=cds2647;Parent=gene2688;Dbxref=Genbank:WP_002222198.1;Name=WP_002222198.1;gbkey=CDS;product=attachment protein;protein_id=WP_002222198.1;transl_table=11
NC_017154.1	RefSeq	gene	2933967	2934149	.	-	.	ID=gene2689;Name=YPD4_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13490
NC_017154.1	Protein Homology	CDS	2933967	2934149	.	-	0	ID=cds2648;Parent=gene2689;Dbxref=Genbank:WP_002223388.1;Name=WP_002223388.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223388.1;transl_table=11
NC_017154.1	RefSeq	gene	2934301	2935554	.	-	.	ID=gene2690;Name=YPD4_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13495;old_locus_tag=YPD4_2288
NC_017154.1	Protein Homology	CDS	2934301	2935554	.	-	0	ID=cds2649;Parent=gene2690;Dbxref=Genbank:WP_002211552.1;Name=WP_002211552.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_002211552.1;transl_table=11
NC_017154.1	RefSeq	gene	2936095	2937285	.	+	.	ID=gene2691;Name=YPD4_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13500;old_locus_tag=YPD4_2289
NC_017154.1	Protein Homology	CDS	2936095	2937285	.	+	0	ID=cds2650;Parent=gene2691;Dbxref=Genbank:WP_002211553.1;Name=WP_002211553.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;product=flavohemoprotein;protein_id=WP_002211553.1;transl_table=11
NC_017154.1	RefSeq	gene	2937749	2938312	.	+	.	ID=gene2692;Name=YPD4_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13505;old_locus_tag=YPD4_2290
NC_017154.1	Protein Homology	CDS	2937749	2938312	.	+	0	ID=cds2651;Parent=gene2692;Dbxref=Genbank:WP_002216119.1;Name=WP_002216119.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002216119.1;transl_table=11
NC_017154.1	RefSeq	gene	2938278	2938649	.	+	.	ID=gene2693;Name=YPD4_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13510;old_locus_tag=YPD4_2291
NC_017154.1	Protein Homology	CDS	2938278	2938649	.	+	0	ID=cds2652;Parent=gene2693;Dbxref=Genbank:WP_002216118.1;Name=WP_002216118.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216118.1;transl_table=11
NC_017154.1	RefSeq	gene	2938818	2939156	.	-	.	ID=gene2694;Name=YPD4_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13515;old_locus_tag=YPD4_2292
NC_017154.1	Protein Homology	CDS	2938818	2939156	.	-	0	ID=cds2653;Parent=gene2694;Dbxref=Genbank:WP_002211554.1;Name=WP_002211554.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=WP_002211554.1;transl_table=11
NC_017154.1	RefSeq	gene	2939171	2940793	.	-	.	ID=gene2695;Name=YPD4_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13520;old_locus_tag=YPD4_2293
NC_017154.1	Protein Homology	CDS	2939171	2940793	.	-	0	ID=cds2654;Parent=gene2695;Dbxref=Genbank:WP_002211555.1;Name=WP_002211555.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;product=NAD synthetase;protein_id=WP_002211555.1;transl_table=11
NC_017154.1	RefSeq	gene	2940953	2942290	.	-	.	ID=gene2696;Name=YPD4_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13525;old_locus_tag=YPD4_2294
NC_017154.1	Protein Homology	CDS	2940953	2942290	.	-	0	ID=cds2655;Parent=gene2696;Dbxref=Genbank:WP_002211556.1;Name=WP_002211556.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211556.1;transl_table=11
NC_017154.1	RefSeq	gene	2942253	2943320	.	-	.	ID=gene2697;Name=YPD4_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13530;old_locus_tag=YPD4_2295
NC_017154.1	Protein Homology	CDS	2942253	2943320	.	-	0	ID=cds2656;Parent=gene2697;Dbxref=Genbank:WP_002430124.1;Name=WP_002430124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002430124.1;transl_table=11
NC_017154.1	RefSeq	gene	2943324	2944760	.	-	.	ID=gene2698;Name=YPD4_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13535;old_locus_tag=YPD4_2296
NC_017154.1	Protein Homology	CDS	2943324	2944760	.	-	0	ID=cds2657;Parent=gene2698;Dbxref=Genbank:WP_002216114.1;Name=WP_002216114.1;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002216114.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2944870	2945591	.	+	.	ID=id216;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2944981	2945439	.	-	.	ID=gene2699;Name=YPD4_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13540;old_locus_tag=YPD4_2297
NC_017154.1	Protein Homology	CDS	2944981	2945439	.	-	0	ID=cds2658;Parent=gene2699;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	2945429	2945647	.	-	.	ID=gene2700;Name=YPD4_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13545
NC_017154.1	Protein Homology	CDS	2945429	2945647	.	-	0	ID=cds2659;Parent=gene2700;Dbxref=Genbank:WP_042468836.1;Name=WP_042468836.1;gbkey=CDS;product=transposase;protein_id=WP_042468836.1;transl_table=11
NC_017154.1	RefSeq	gene	2946666	2947226	.	+	.	ID=gene2701;Name=YPD4_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13550;old_locus_tag=YPD4_2298
NC_017154.1	Protein Homology	CDS	2946666	2947226	.	+	0	ID=cds2660;Parent=gene2701;Dbxref=Genbank:WP_002211559.1;Name=WP_002211559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211559.1;transl_table=11
NC_017154.1	RefSeq	gene	2947678	2948127	.	+	.	ID=gene2702;Name=YPD4_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13555;old_locus_tag=YPD4_2299
NC_017154.1	Protein Homology	CDS	2947678	2948127	.	+	0	ID=cds2661;Parent=gene2702;Dbxref=Genbank:WP_002211560.1;Name=WP_002211560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211560.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2948334	2948508	.	+	.	ID=id217;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2948539	2952429	.	-	.	ID=gene2703;Name=YPD4_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13560;old_locus_tag=YPD4_2300
NC_017154.1	Protein Homology	CDS	2948539	2952429	.	-	0	ID=cds2662;Parent=gene2703;Dbxref=Genbank:WP_002211561.1;Name=WP_002211561.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_002211561.1;transl_table=11
NC_017154.1	RefSeq	gene	2952745	2954205	.	+	.	ID=gene2704;Name=YPD4_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13565;old_locus_tag=YPD4_2301
NC_017154.1	Protein Homology	CDS	2952745	2954205	.	+	0	ID=cds2663;Parent=gene2704;Dbxref=Genbank:WP_002211562.1;Name=WP_002211562.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002211562.1;transl_table=11
NC_017154.1	RefSeq	gene	2954314	2954916	.	-	.	ID=gene2705;Name=YPD4_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13570;old_locus_tag=YPD4_2302
NC_017154.1	Protein Homology	CDS	2954314	2954916	.	-	0	ID=cds2664;Parent=gene2705;Dbxref=Genbank:WP_002211563.1;Name=WP_002211563.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_002211563.1;transl_table=11
NC_017154.1	RefSeq	gene	2954987	2955682	.	-	.	ID=gene2706;Name=YPD4_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13575;old_locus_tag=YPD4_2303
NC_017154.1	Protein Homology	CDS	2954987	2955682	.	-	0	ID=cds2665;Parent=gene2706;Dbxref=Genbank:WP_002211564.1;Name=WP_002211564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211564.1;transl_table=11
NC_017154.1	RefSeq	gene	2955909	2956796	.	-	.	ID=gene2707;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=YPD4_RS13580;old_locus_tag=YPD4_2304
NC_017154.1	Protein Homology	CDS	2955909	2956796	.	-	0	ID=cds2666;Parent=gene2707;Dbxref=Genbank:WP_002211565.1;Name=WP_002211565.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11
NC_017154.1	RefSeq	gene	2957004	2957843	.	+	.	ID=gene2708;Name=YPD4_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13585;old_locus_tag=YPD4_2305
NC_017154.1	Protein Homology	CDS	2957004	2957843	.	+	0	ID=cds2667;Parent=gene2708;Dbxref=Genbank:WP_002211566.1;Name=WP_002211566.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211566.1;transl_table=11
NC_017154.1	RefSeq	gene	2958005	2958265	.	+	.	ID=gene2709;Name=YPD4_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13590
NC_017154.1	Protein Homology	CDS	2958005	2958265	.	+	0	ID=cds2668;Parent=gene2709;Dbxref=Genbank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002211567.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2958311	2959028	.	+	.	ID=id218;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2958421	2958879	.	-	.	ID=gene2710;Name=YPD4_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13595;old_locus_tag=YPD4_2306
NC_017154.1	Protein Homology	CDS	2958421	2958879	.	-	0	ID=cds2669;Parent=gene2710;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	2958869	2959024	.	-	.	ID=gene2711;Name=YPD4_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13600
NC_017154.1	Protein Homology	CDS	2958869	2959024	.	-	0	ID=cds2670;Parent=gene2711;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	2959081	2959461	.	-	.	ID=gene2712;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=YPD4_RS13605;old_locus_tag=YPD4_2307
NC_017154.1	Protein Homology	CDS	2959081	2959461	.	-	0	ID=cds2671;Parent=gene2712;Dbxref=Genbank:WP_002211568.1;Name=WP_002211568.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=holo-ACP synthase;protein_id=WP_002211568.1;transl_table=11
NC_017154.1	RefSeq	gene	2959461	2960192	.	-	.	ID=gene2713;Name=YPD4_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13610;old_locus_tag=YPD4_2308
NC_017154.1	Protein Homology	CDS	2959461	2960192	.	-	0	ID=cds2672;Parent=gene2713;Dbxref=Genbank:WP_002211569.1;Name=WP_002211569.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_002211569.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2960315	2962274	.	+	.	ID=id219;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2960382	2960951	.	-	.	ID=gene2714;Name=YPD4_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13615;old_locus_tag=YPD4_2309
NC_017154.1	Protein Homology	CDS	2960382	2960951	.	-	0	ID=cds2673;Parent=gene2714;Dbxref=Genbank:WP_000846449.1;Name=WP_000846449.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_000846449.1;transl_table=11
NC_017154.1	RefSeq	gene	2960929	2961162	.	-	.	ID=gene2715;Name=YPD4_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13620
NC_017154.1	Protein Homology	CDS	2960929	2961162	.	-	0	ID=cds2674;Parent=gene2715;Dbxref=Genbank:WP_044023371.1;Name=WP_044023371.1;gbkey=CDS;product=transposase;protein_id=WP_044023371.1;transl_table=11
NC_017154.1	RefSeq	gene	2961162	2962184	.	-	.	ID=gene2716;Name=YPD4_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13625;old_locus_tag=YPD4_2310
NC_017154.1	Protein Homology	CDS	2961162	2962184	.	-	0	ID=cds2675;Parent=gene2716;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	2962311	2963036	.	-	.	ID=gene2717;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=YPD4_RS13630;old_locus_tag=YPD4_2311
NC_017154.1	Protein Homology	CDS	2962311	2963036	.	-	0	ID=cds2676;Parent=gene2717;Dbxref=Genbank:WP_002209680.1;Name=WP_002209680.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11
NC_017154.1	RefSeq	gene	2963046	2963957	.	-	.	ID=gene2718;Name=YPD4_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13635;old_locus_tag=YPD4_2312
NC_017154.1	Protein Homology	CDS	2963046	2963957	.	-	0	ID=cds2677;Parent=gene2718;Dbxref=Genbank:WP_002214829.1;Name=WP_002214829.1;gbkey=CDS;product=GTPase Era;protein_id=WP_002214829.1;transl_table=11
NC_017154.1	RefSeq	gene	2963954	2964634	.	-	.	ID=gene2719;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=YPD4_RS13640;old_locus_tag=YPD4_2313
NC_017154.1	Protein Homology	CDS	2963954	2964634	.	-	0	ID=cds2678;Parent=gene2719;Dbxref=Genbank:WP_002209679.1;Name=WP_002209679.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease 3;protein_id=WP_002209679.1;transl_table=11
NC_017154.1	RefSeq	gene	2964986	2965984	.	-	.	ID=gene2720;Name=YPD4_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13645;old_locus_tag=YPD4_2314
NC_017154.1	Protein Homology	CDS	2964986	2965984	.	-	0	ID=cds2679;Parent=gene2720;Dbxref=Genbank:WP_002209678.1;Name=WP_002209678.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase I;protein_id=WP_002209678.1;transl_table=11
NC_017154.1	RefSeq	gene	2965994	2967792	.	-	.	ID=gene2721;Name=YPD4_RS13650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS13650;old_locus_tag=YPD4_2315;pseudo=true
NC_017154.1	Protein Homology	CDS	2965994	2967792	.	-	0	ID=cds2680;Parent=gene2721;exception=annotated by transcript or proteomic data;gbkey=CDS;product=elongation factor 4;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	2968292	2969146	.	+	.	ID=gene2722;Name=YPD4_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13655;old_locus_tag=YPD4_2316
NC_017154.1	Protein Homology	CDS	2968292	2969146	.	+	0	ID=cds2681;Parent=gene2722;Dbxref=Genbank:WP_002209676.1;Name=WP_002209676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209676.1;transl_table=11
NC_017154.1	RefSeq	gene	2969167	2969622	.	-	.	ID=gene2723;Name=YPD4_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13660;old_locus_tag=YPD4_2317
NC_017154.1	Protein Homology	CDS	2969167	2969622	.	-	0	ID=cds2682;Parent=gene2723;Dbxref=Genbank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11
NC_017154.1	RefSeq	gene	2969619	2970575	.	-	.	ID=gene2724;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=YPD4_RS13665;old_locus_tag=YPD4_2318
NC_017154.1	Protein Homology	CDS	2969619	2970575	.	-	0	ID=cds2683;Parent=gene2724;Dbxref=Genbank:WP_002209674.1;Name=WP_002209674.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=anti-sigma E factor;protein_id=WP_002209674.1;transl_table=11
NC_017154.1	RefSeq	gene	2970575	2971231	.	-	.	ID=gene2725;Name=YPD4_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13670;old_locus_tag=YPD4_2319
NC_017154.1	Protein Homology	CDS	2970575	2971231	.	-	0	ID=cds2684;Parent=gene2725;Dbxref=Genbank:WP_002209673.1;Name=WP_002209673.1;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=WP_002209673.1;transl_table=11
NC_017154.1	RefSeq	gene	2971257	2971832	.	-	.	ID=gene2726;Name=YPD4_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13675;old_locus_tag=YPD4_2320
NC_017154.1	Protein Homology	CDS	2971257	2971832	.	-	0	ID=cds2685;Parent=gene2726;Dbxref=Genbank:WP_002209672.1;Name=WP_002209672.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=RNA polymerase sigma factor AlgU;protein_id=WP_002209672.1;transl_table=11
NC_017154.1	RefSeq	gene	2972020	2973657	.	+	.	ID=gene2727;Name=YPD4_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13680;old_locus_tag=YPD4_2321
NC_017154.1	Protein Homology	CDS	2972020	2973657	.	+	0	ID=cds2686;Parent=gene2727;Dbxref=Genbank:WP_002217781.1;Name=WP_002217781.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_002217781.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	2973696	2973872	.	+	.	ID=id220;gbkey=repeat_region
NC_017154.1	RefSeq	gene	2973940	2974686	.	-	.	ID=gene2728;Name=YPD4_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13685;old_locus_tag=YPD4_2322
NC_017154.1	Protein Homology	CDS	2973940	2974686	.	-	0	ID=cds2687;Parent=gene2728;Dbxref=Genbank:WP_002209670.1;Name=WP_002209670.1;gbkey=CDS;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002209670.1;transl_table=11
NC_017154.1	RefSeq	gene	2974938	2976263	.	+	.	ID=gene2729;Name=YPD4_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13690;old_locus_tag=YPD4_2323
NC_017154.1	Protein Homology	CDS	2974938	2976263	.	+	0	ID=cds2688;Parent=gene2729;Dbxref=Genbank:WP_002209669.1;Name=WP_002209669.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=WP_002209669.1;transl_table=11
NC_017154.1	RefSeq	gene	2976394	2977050	.	-	.	ID=gene2730;Name=YPD4_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13695;old_locus_tag=YPD4_2324
NC_017154.1	Protein Homology	CDS	2976394	2977050	.	-	0	ID=cds2689;Parent=gene2730;Dbxref=Genbank:WP_002209667.1;Name=WP_002209667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209667.1;transl_table=11
NC_017154.1	RefSeq	gene	2977037	2977135	.	-	.	ID=gene2731;Name=YPD4_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13700
NC_017154.1	Protein Homology	CDS	2977037	2977135	.	-	0	ID=cds2690;Parent=gene2731;Dbxref=Genbank:WP_002228379.1;Name=WP_002228379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228379.1;transl_table=11
NC_017154.1	RefSeq	gene	2977128	2977889	.	-	.	ID=gene2732;Name=YPD4_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13705;old_locus_tag=YPD4_2325
NC_017154.1	Protein Homology	CDS	2977128	2977889	.	-	0	ID=cds2691;Parent=gene2732;Dbxref=Genbank:WP_002359738.1;Name=WP_002359738.1;gbkey=CDS;product=phospholipase A;protein_id=WP_002359738.1;transl_table=11
NC_017154.1	RefSeq	gene	2978270	2978653	.	-	.	ID=gene2733;Name=YPD4_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13710;old_locus_tag=YPD4_2326
NC_017154.1	Protein Homology	CDS	2978270	2978653	.	-	0	ID=cds2692;Parent=gene2733;Dbxref=Genbank:WP_002209664.1;Name=WP_002209664.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11
NC_017154.1	RefSeq	gene	2979006	2979692	.	+	.	ID=gene2734;Name=YPD4_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13715;old_locus_tag=YPD4_2327
NC_017154.1	Protein Homology	CDS	2979006	2979692	.	+	0	ID=cds2693;Parent=gene2734;Dbxref=Genbank:WP_002209663.1;Name=WP_002209663.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=WP_002209663.1;transl_table=11
NC_017154.1	RefSeq	gene	2979783	2980430	.	-	.	ID=gene2735;Name=YPD4_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13720;old_locus_tag=YPD4_2328
NC_017154.1	Protein Homology	CDS	2979783	2980430	.	-	0	ID=cds2694;Parent=gene2735;Dbxref=Genbank:WP_002209662.1;Name=WP_002209662.1;gbkey=CDS;product=pyrrolidone-carboxylate peptidase;protein_id=WP_002209662.1;transl_table=11
NC_017154.1	RefSeq	gene	2980440	2981459	.	-	.	ID=gene2736;Name=YPD4_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13725;old_locus_tag=YPD4_2329
NC_017154.1	Protein Homology	CDS	2980440	2981459	.	-	0	ID=cds2695;Parent=gene2736;Dbxref=Genbank:WP_002209661.1;Name=WP_002209661.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209661.1;transl_table=11
NC_017154.1	RefSeq	gene	2981456	2982187	.	-	.	ID=gene2737;Name=YPD4_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13730;old_locus_tag=YPD4_2330
NC_017154.1	Protein Homology	CDS	2981456	2982187	.	-	0	ID=cds2696;Parent=gene2737;Dbxref=Genbank:WP_002209660.1;Name=WP_002209660.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209660.1;transl_table=11
NC_017154.1	RefSeq	gene	2982272	2983009	.	-	.	ID=gene2738;Name=YPD4_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13735;old_locus_tag=YPD4_2331
NC_017154.1	Protein Homology	CDS	2982272	2983009	.	-	0	ID=cds2697;Parent=gene2738;Dbxref=Genbank:WP_002209659.1;Name=WP_002209659.1;gbkey=CDS;product=LamB/YcsF family protein;protein_id=WP_002209659.1;transl_table=11
NC_017154.1	RefSeq	gene	2983006	2983956	.	-	.	ID=gene2739;Name=YPD4_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13740;old_locus_tag=YPD4_2332
NC_017154.1	Protein Homology	CDS	2983006	2983956	.	-	0	ID=cds2698;Parent=gene2739;Dbxref=Genbank:WP_002209658.1;Name=WP_002209658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209658.1;transl_table=11
NC_017154.1	RefSeq	gene	2983950	2984606	.	-	.	ID=gene2740;Name=YPD4_RS13745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS13745;pseudo=true
NC_017154.1	Protein Homology	CDS	2983950	2984606	.	-	0	ID=cds2699;Parent=gene2740;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2984061..2984063)%2Caa:Other);transl_table=11
NC_017154.1	RefSeq	gene	2985225	2985968	.	-	.	ID=gene2741;Name=YPD4_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13750;old_locus_tag=YPD4_2334
NC_017154.1	Protein Homology	CDS	2985225	2985968	.	-	0	ID=cds2700;Parent=gene2741;Dbxref=Genbank:WP_002354507.1;Name=WP_002354507.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_002354507.1;transl_table=11
NC_017154.1	RefSeq	gene	2986111	2987148	.	-	.	ID=gene2742;Name=YPD4_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13755;old_locus_tag=YPD4_2335
NC_017154.1	Protein Homology	CDS	2986111	2987148	.	-	0	ID=cds2701;Parent=gene2742;Dbxref=Genbank:WP_002209656.1;Name=WP_002209656.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002209656.1;transl_table=11
NC_017154.1	RefSeq	gene	2987139	2988602	.	-	.	ID=gene2743;Name=YPD4_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13760;old_locus_tag=YPD4_2336
NC_017154.1	Protein Homology	CDS	2987139	2988602	.	-	0	ID=cds2702;Parent=gene2743;Dbxref=Genbank:WP_002209655.1;Name=WP_002209655.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_002209655.1;transl_table=11
NC_017154.1	RefSeq	gene	2988732	2989214	.	-	.	ID=gene2744;Name=YPD4_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13765;old_locus_tag=YPD4_2337
NC_017154.1	Protein Homology	CDS	2988732	2989214	.	-	0	ID=cds2703;Parent=gene2744;Dbxref=Genbank:WP_002209654.1;Name=WP_002209654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209654.1;transl_table=11
NC_017154.1	RefSeq	gene	2989553	2989759	.	-	.	ID=gene2745;Name=YPD4_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13770
NC_017154.1	Protein Homology	CDS	2989553	2989759	.	-	0	ID=cds2704;Parent=gene2745;Dbxref=Genbank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209653.1;transl_table=11
NC_017154.1	RefSeq	gene	2989925	2990167	.	+	.	ID=gene2746;Name=YPD4_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13775
NC_017154.1	Protein Homology	CDS	2989925	2990167	.	+	0	ID=cds2705;Parent=gene2746;Dbxref=Genbank:WP_002216017.1;Name=WP_002216017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216017.1;transl_table=11
NC_017154.1	RefSeq	gene	2990164	2990253	.	+	.	ID=gene2747;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=YPD4_RS13780
NC_017154.1	Protein Homology	CDS	2990164	2990253	.	+	0	ID=cds2706;Parent=gene2747;Dbxref=Genbank:WP_002216016.1;Name=WP_002216016.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpF;product=potassium transporter TrkA;protein_id=WP_002216016.1;transl_table=11
NC_017154.1	RefSeq	gene	2990254	2991942	.	+	.	ID=gene2748;Name=YPD4_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13785;old_locus_tag=YPD4_2338
NC_017154.1	Protein Homology	CDS	2990254	2991942	.	+	0	ID=cds2707;Parent=gene2748;Dbxref=Genbank:WP_002209652.1;Name=WP_002209652.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase A chain;protein_id=WP_002209652.1;transl_table=11
NC_017154.1	RefSeq	gene	2992036	2994102	.	+	.	ID=gene2749;Name=YPD4_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13790;old_locus_tag=YPD4_2339
NC_017154.1	Protein Homology	CDS	2992036	2994102	.	+	0	ID=cds2708;Parent=gene2749;Dbxref=Genbank:WP_002209651.1;Name=WP_002209651.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase B chain;protein_id=WP_002209651.1;transl_table=11
NC_017154.1	RefSeq	gene	2994266	2994916	.	+	.	ID=gene2750;Name=YPD4_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13795;old_locus_tag=YPD4_2340
NC_017154.1	Protein Homology	CDS	2994266	2994916	.	+	0	ID=cds2709;Parent=gene2750;Dbxref=Genbank:WP_002224856.1;Name=WP_002224856.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=WP_002224856.1;transl_table=11
NC_017154.1	RefSeq	gene	2994926	2997652	.	+	.	ID=gene2751;Name=YPD4_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13800;old_locus_tag=YPD4_2341
NC_017154.1	Protein Homology	CDS	2994926	2997652	.	+	0	ID=cds2710;Parent=gene2751;Dbxref=Genbank:WP_002209649.1;Name=WP_002209649.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;gbkey=CDS;product=two-component system sensor histidine kinase KdpD;protein_id=WP_002209649.1;transl_table=11
NC_017154.1	RefSeq	gene	2997888	2998574	.	+	.	ID=gene2752;Name=YPD4_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13805;old_locus_tag=YPD4_2342
NC_017154.1	Protein Homology	CDS	2997888	2998574	.	+	0	ID=cds2711;Parent=gene2752;Dbxref=Genbank:WP_029562574.1;Name=WP_029562574.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_029562574.1;transl_table=11
NC_017154.1	RefSeq	gene	2998669	2999097	.	+	.	ID=gene2753;Name=YPD4_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13810;old_locus_tag=YPD4_2343
NC_017154.1	Protein Homology	CDS	2998669	2999097	.	+	0	ID=cds2712;Parent=gene2753;Dbxref=Genbank:WP_002209647.1;Name=WP_002209647.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209647.1;transl_table=11
NC_017154.1	RefSeq	gene	2999225	2999467	.	-	.	ID=gene2754;Name=YPD4_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13815
NC_017154.1	Protein Homology	CDS	2999225	2999467	.	-	0	ID=cds2713;Parent=gene2754;Dbxref=Genbank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11
NC_017154.1	RefSeq	gene	2999510	2999623	.	-	.	ID=gene2755;Name=YPD4_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13820
NC_017154.1	Protein Homology	CDS	2999510	2999623	.	-	0	ID=cds2714;Parent=gene2755;Dbxref=Genbank:WP_002216362.1;Name=WP_002216362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216362.1;transl_table=11
NC_017154.1	RefSeq	gene	2999841	3001484	.	-	.	ID=gene2756;Name=YPD4_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13825;old_locus_tag=YPD4_2344
NC_017154.1	Protein Homology	CDS	2999841	3001484	.	-	0	ID=cds2715;Parent=gene2756;Dbxref=Genbank:WP_002216360.1;Name=WP_002216360.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;product=phosphoglucomutase;protein_id=WP_002216360.1;transl_table=11
NC_017154.1	RefSeq	gene	3001557	3002084	.	-	.	ID=gene2757;Name=YPD4_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13830;old_locus_tag=YPD4_2345
NC_017154.1	Protein Homology	CDS	3001557	3002084	.	-	0	ID=cds2716;Parent=gene2757;Dbxref=Genbank:WP_002212248.1;Name=WP_002212248.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=N-carbamyl-L-amino acid amidohydrolase;protein_id=WP_002212248.1;transl_table=11
NC_017154.1	RefSeq	gene	3002579	3002947	.	+	.	ID=gene2758;Name=YPD4_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13835
NC_017154.1	Protein Homology	CDS	3002579	3002947	.	+	0	ID=cds2717;Parent=gene2758;Dbxref=Genbank:WP_002212246.1;Name=WP_002212246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212246.1;transl_table=11
NC_017154.1	RefSeq	gene	3003059	3003235	.	+	.	ID=gene2759;Name=YPD4_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13840
NC_017154.1	Protein Homology	CDS	3003059	3003235	.	+	0	ID=cds2718;Parent=gene2759;Dbxref=Genbank:WP_002212245.1;Name=WP_002212245.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212245.1;transl_table=11
NC_017154.1	RefSeq	gene	3003242	3004003	.	-	.	ID=gene2760;Name=YPD4_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13845;old_locus_tag=YPD4_2346
NC_017154.1	Protein Homology	CDS	3003242	3004003	.	-	0	ID=cds2719;Parent=gene2760;Dbxref=Genbank:WP_002212244.1;Name=WP_002212244.1;gbkey=CDS;product=chitooligosaccharide deacetylase;protein_id=WP_002212244.1;transl_table=11
NC_017154.1	RefSeq	gene	3004055	3004885	.	-	.	ID=gene2761;Name=YPD4_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13850;old_locus_tag=YPD4_2347
NC_017154.1	Protein Homology	CDS	3004055	3004885	.	-	0	ID=cds2720;Parent=gene2761;Dbxref=Genbank:WP_002212243.1;Name=WP_002212243.1;Note=represses the celABCDF-ydjC operon involved in carbon uptake;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212243.1;transl_table=11
NC_017154.1	RefSeq	gene	3004934	3005281	.	-	.	ID=gene2762;Name=YPD4_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13855;old_locus_tag=YPD4_2348
NC_017154.1	Protein Homology	CDS	3004934	3005281	.	-	0	ID=cds2721;Parent=gene2762;Dbxref=Genbank:WP_002212242.1;Name=WP_002212242.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIA;protein_id=WP_002212242.1;transl_table=11
NC_017154.1	RefSeq	gene	3005448	3006809	.	-	.	ID=gene2763;Name=YPD4_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13860;old_locus_tag=YPD4_2349
NC_017154.1	Protein Homology	CDS	3005448	3006809	.	-	0	ID=cds2722;Parent=gene2763;Dbxref=Genbank:WP_002212241.1;Name=WP_002212241.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIC;protein_id=WP_002212241.1;transl_table=11
NC_017154.1	RefSeq	gene	3006820	3007137	.	-	.	ID=gene2764;Name=YPD4_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13865;old_locus_tag=YPD4_2350
NC_017154.1	Protein Homology	CDS	3006820	3007137	.	-	0	ID=cds2723;Parent=gene2764;Dbxref=Genbank:WP_002212240.1;Name=WP_002212240.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIB;protein_id=WP_002212240.1;transl_table=11
NC_017154.1	RefSeq	gene	3007910	3008089	.	+	.	ID=gene2765;Name=YPD4_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13870
NC_017154.1	Protein Homology	CDS	3007910	3008089	.	+	0	ID=cds2724;Parent=gene2765;Dbxref=Genbank:WP_002212239.1;Name=WP_002212239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212239.1;transl_table=11
NC_017154.1	RefSeq	gene	3008178	3008558	.	+	.	ID=gene2766;Name=YPD4_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13875;old_locus_tag=YPD4_2351
NC_017154.1	Protein Homology	CDS	3008178	3008558	.	+	0	ID=cds2725;Parent=gene2766;Dbxref=Genbank:WP_002212238.1;Name=WP_002212238.1;gbkey=CDS;product=chromosome condensation protein CrcB;protein_id=WP_002212238.1;transl_table=11
NC_017154.1	RefSeq	gene	3008574	3008978	.	+	.	ID=gene2767;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=YPD4_RS13880;old_locus_tag=YPD4_2352
NC_017154.1	Protein Homology	CDS	3008574	3008978	.	+	0	ID=cds2726;Parent=gene2767;Dbxref=Genbank:WP_002212237.1;Name=WP_002212237.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=WP_002212237.1;transl_table=11
NC_017154.1	RefSeq	gene	3009076	3010251	.	-	.	ID=gene2768;Name=YPD4_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13885;old_locus_tag=YPD4_2353
NC_017154.1	Protein Homology	CDS	3009076	3010251	.	-	0	ID=cds2727;Parent=gene2768;Dbxref=Genbank:WP_002212236.1;Name=WP_002212236.1;gbkey=CDS;product=voltage-gated potassium channel;protein_id=WP_002212236.1;transl_table=11
NC_017154.1	RefSeq	gene	3010640	3010870	.	-	.	ID=gene2769;Name=YPD4_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13890
NC_017154.1	Protein Homology	CDS	3010640	3010870	.	-	0	ID=cds2728;Parent=gene2769;Dbxref=Genbank:WP_002215289.1;Name=WP_002215289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215289.1;transl_table=11
NC_017154.1	RefSeq	gene	3010869	3011198	.	+	.	ID=gene2770;Name=YPD4_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13895;old_locus_tag=YPD4_2354
NC_017154.1	Protein Homology	CDS	3010869	3011198	.	+	0	ID=cds2729;Parent=gene2770;Dbxref=Genbank:WP_002212235.1;Name=WP_002212235.1;gbkey=CDS;product=acid-resistance protein;protein_id=WP_002212235.1;transl_table=11
NC_017154.1	RefSeq	gene	3011367	3012425	.	-	.	ID=gene2771;Name=YPD4_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13900;old_locus_tag=YPD4_2355
NC_017154.1	Protein Homology	CDS	3011367	3012425	.	-	0	ID=cds2730;Parent=gene2771;Dbxref=Genbank:WP_002212234.1;Name=WP_002212234.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002212234.1;transl_table=11
NC_017154.1	RefSeq	gene	3012574	3013566	.	-	.	ID=gene2772;Name=YPD4_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13905;old_locus_tag=YPD4_2356
NC_017154.1	Protein Homology	CDS	3012574	3013566	.	-	0	ID=cds2731;Parent=gene2772;Dbxref=Genbank:WP_002212233.1;Name=WP_002212233.1;gbkey=CDS;product=urea transporter;protein_id=WP_002212233.1;transl_table=11
NC_017154.1	RefSeq	gene	3013891	3014724	.	-	.	ID=gene2773;Name=YPD4_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13910;old_locus_tag=YPD4_2357
NC_017154.1	Protein Homology	CDS	3013891	3014724	.	-	0	ID=cds2732;Parent=gene2773;Dbxref=Genbank:WP_002228375.1;Name=WP_002228375.1;gbkey=CDS;product=urease accessory protein UreD;protein_id=WP_002228375.1;transl_table=11
NC_017154.1	RefSeq	gene	3014721	3015383	.	-	.	ID=gene2774;Name=YPD4_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13915;old_locus_tag=YPD4_2358
NC_017154.1	Protein Homology	CDS	3014721	3015383	.	-	0	ID=cds2733;Parent=gene2774;Dbxref=Genbank:WP_002212232.1;Name=WP_002212232.1;gbkey=CDS;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11
NC_017154.1	RefSeq	gene	3015510	3016196	.	-	.	ID=gene2775;Name=YPD4_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13920;old_locus_tag=YPD4_2359
NC_017154.1	Protein Homology	CDS	3015510	3016196	.	-	0	ID=cds2734;Parent=gene2775;Dbxref=Genbank:WP_002212231.1;Name=WP_002212231.1;gbkey=CDS;product=urease accessory protein UreF;protein_id=WP_002212231.1;transl_table=11
NC_017154.1	RefSeq	gene	3016218	3016913	.	-	.	ID=gene2776;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=YPD4_RS13925;old_locus_tag=YPD4_2360
NC_017154.1	Protein Homology	CDS	3016218	3016913	.	-	0	ID=cds2735;Parent=gene2776;Dbxref=Genbank:WP_002212230.1;Name=WP_002212230.1;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;gbkey=CDS;gene=ureE;product=urease accessory protein UreE;protein_id=WP_002212230.1;transl_table=11
NC_017154.1	RefSeq	gene	3017209	3018927	.	-	.	ID=gene2777;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=YPD4_RS13930;old_locus_tag=YPD4_2361
NC_017154.1	Protein Homology	CDS	3017209	3018927	.	-	0	ID=cds2736;Parent=gene2777;Dbxref=Genbank:WP_002212229.1;Name=WP_002212229.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11
NC_017154.1	RefSeq	gene	3019017	3019451	.	-	.	ID=gene2778;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=YPD4_RS13935;old_locus_tag=YPD4_2362
NC_017154.1	Protein Homology	CDS	3019017	3019451	.	-	0	ID=cds2737;Parent=gene2778;Dbxref=Genbank:WP_002212228.1;Name=WP_002212228.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta);gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=WP_002212228.1;transl_table=11
NC_017154.1	RefSeq	gene	3019504	3019806	.	-	.	ID=gene2779;Name=YPD4_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13940;old_locus_tag=YPD4_2363
NC_017154.1	Protein Homology	CDS	3019504	3019806	.	-	0	ID=cds2738;Parent=gene2779;Dbxref=Genbank:WP_002215288.1;Name=WP_002215288.1;gbkey=CDS;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11
NC_017154.1	RefSeq	gene	3021005	3021670	.	-	.	ID=gene2780;Name=YPD4_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13945;old_locus_tag=YPD4_2364
NC_017154.1	Protein Homology	CDS	3021005	3021670	.	-	0	ID=cds2739;Parent=gene2780;Dbxref=Genbank:WP_002212226.1;Name=WP_002212226.1;gbkey=CDS;product=nickel ABC transporter ATP-binding protein;protein_id=WP_002212226.1;transl_table=11
NC_017154.1	RefSeq	gene	3021663	3022469	.	-	.	ID=gene2781;Name=YPD4_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13950;old_locus_tag=YPD4_2365
NC_017154.1	Protein Homology	CDS	3021663	3022469	.	-	0	ID=cds2740;Parent=gene2781;Dbxref=Genbank:WP_002212225.1;Name=WP_002212225.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002212225.1;transl_table=11
NC_017154.1	RefSeq	gene	3022469	3023275	.	-	.	ID=gene2782;Name=YPD4_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13955;old_locus_tag=YPD4_2366
NC_017154.1	Protein Homology	CDS	3022469	3023275	.	-	0	ID=cds2741;Parent=gene2782;Dbxref=Genbank:WP_002212224.1;Name=WP_002212224.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002212224.1;transl_table=11
NC_017154.1	RefSeq	gene	3023272	3024255	.	-	.	ID=gene2783;Name=YPD4_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13960;old_locus_tag=YPD4_2367
NC_017154.1	Protein Homology	CDS	3023272	3024255	.	-	0	ID=cds2742;Parent=gene2783;Dbxref=Genbank:WP_002354495.1;Name=WP_002354495.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002354495.1;transl_table=11
NC_017154.1	RefSeq	gene	3024240	3025817	.	-	.	ID=gene2784;Name=YPD4_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13965;old_locus_tag=YPD4_2368
NC_017154.1	Protein Homology	CDS	3024240	3025817	.	-	0	ID=cds2743;Parent=gene2784;Dbxref=Genbank:WP_002215276.1;Name=WP_002215276.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002215276.1;transl_table=11
NC_017154.1	cmsearch	region	3026588	3027051	.	-	.	ID=id221;Note=cspA;gbkey=misc_feature
NC_017154.1	RefSeq	gene	3026659	3026872	.	-	.	ID=gene2785;Name=YPD4_RS13970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS13970;pseudo=true
NC_017154.1	Protein Homology	CDS	3026659	3026872	.	-	0	ID=cds2744;Parent=gene2785;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cold-shock protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3027381	3027719	.	+	.	ID=gene2786;Name=YPD4_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13975;old_locus_tag=YPD4_2369
NC_017154.1	Protein Homology	CDS	3027381	3027719	.	+	0	ID=cds2745;Parent=gene2786;Dbxref=Genbank:WP_002224857.1;Name=WP_002224857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224857.1;transl_table=11
NC_017154.1	RefSeq	gene	3027884	3028333	.	+	.	ID=gene2787;Name=YPD4_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13980;old_locus_tag=YPD4_2370
NC_017154.1	Protein Homology	CDS	3027884	3028333	.	+	0	ID=cds2746;Parent=gene2787;Dbxref=Genbank:WP_002212217.1;Name=WP_002212217.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212217.1;transl_table=11
NC_017154.1	RefSeq	gene	3028431	3028766	.	-	.	ID=gene2788;Name=YPD4_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13985;old_locus_tag=YPD4_2371
NC_017154.1	Protein Homology	CDS	3028431	3028766	.	-	0	ID=cds2747;Parent=gene2788;Dbxref=Genbank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212216.1;transl_table=11
NC_017154.1	RefSeq	gene	3029244	3029609	.	-	.	ID=gene2789;Name=YPD4_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13990;old_locus_tag=YPD4_2372
NC_017154.1	Protein Homology	CDS	3029244	3029609	.	-	0	ID=cds2748;Parent=gene2789;Dbxref=Genbank:WP_002212215.1;Name=WP_002212215.1;gbkey=CDS;product=acid shock protein;protein_id=WP_002212215.1;transl_table=11
NC_017154.1	RefSeq	gene	3030130	3030366	.	+	.	ID=gene2790;Name=YPD4_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS13995
NC_017154.1	Protein Homology	CDS	3030130	3030366	.	+	0	ID=cds2749;Parent=gene2790;Dbxref=Genbank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002212214.1;transl_table=11
NC_017154.1	RefSeq	gene	3030380	3030784	.	+	.	ID=gene2791;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=YPD4_RS14000;old_locus_tag=YPD4_2373
NC_017154.1	Protein Homology	CDS	3030380	3030784	.	+	0	ID=cds2750;Parent=gene2791;Dbxref=Genbank:WP_002215935.1;Name=WP_002215935.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=protein NrdI;protein_id=WP_002215935.1;transl_table=11
NC_017154.1	RefSeq	gene	3030766	3032917	.	+	.	ID=gene2792;Name=YPD4_RS14005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14005;old_locus_tag=YPD4_2375;pseudo=true
NC_017154.1	Protein Homology	CDS	3030766	3032917	.	+	0	ID=cds2751;Parent=gene2792;Note=Catalyzes the rate-limiting step in dNTP synthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3033024	3033995	.	+	.	ID=gene2793;Name=YPD4_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14010;old_locus_tag=YPD4_2376
NC_017154.1	Protein Homology	CDS	3033024	3033995	.	+	0	ID=cds2752;Parent=gene2793;Dbxref=Genbank:WP_002212211.1;Name=WP_002212211.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002212211.1;transl_table=11
NC_017154.1	RefSeq	gene	3034671	3035870	.	+	.	ID=gene2794;Name=YPD4_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14015;old_locus_tag=YPD4_2377
NC_017154.1	Protein Homology	CDS	3034671	3035870	.	+	0	ID=cds2753;Parent=gene2794;Dbxref=Genbank:WP_002212210.1;Name=WP_002212210.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=WP_002212210.1;transl_table=11
NC_017154.1	RefSeq	gene	3035863	3037029	.	+	.	ID=gene2795;Name=YPD4_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14020;old_locus_tag=YPD4_2378
NC_017154.1	Protein Homology	CDS	3035863	3037029	.	+	0	ID=cds2754;Parent=gene2795;Dbxref=Genbank:WP_002212209.1;Name=WP_002212209.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_002212209.1;transl_table=11
NC_017154.1	RefSeq	gene	3037077	3038081	.	+	.	ID=gene2796;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=YPD4_RS14025;old_locus_tag=YPD4_2379
NC_017154.1	Protein Homology	CDS	3037077	3038081	.	+	0	ID=cds2755;Parent=gene2796;Dbxref=Genbank:WP_002215933.1;Name=WP_002215933.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002215933.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3038112	3038282	.	+	.	ID=id222;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3038311	3039048	.	-	.	ID=gene2797;Name=YPD4_RS14030;end_range=3039048,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14030;old_locus_tag=YPD4_2380;partial=true;pseudo=true
NC_017154.1	Protein Homology	CDS	3038311	3039048	.	-	0	ID=cds2756;Parent=gene2797;end_range=3039048,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=allantoinase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	3039048	3041004	.	+	.	ID=id223;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3039135	3040157	.	+	.	ID=gene2798;Name=YPD4_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14035;old_locus_tag=YPD4_2381
NC_017154.1	Protein Homology	CDS	3039135	3040157	.	+	0	ID=cds2757;Parent=gene2798;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	3040157	3040936	.	+	.	ID=gene2799;Name=YPD4_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14040;old_locus_tag=YPD4_2382
NC_017154.1	Protein Homology	CDS	3040157	3040936	.	+	0	ID=cds2758;Parent=gene2799;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	3040949	3041413	.	+	.	ID=gene2800;Name=YPD4_RS14045;end_range=3041413,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14045;old_locus_tag=YPD4_2383;partial=true;pseudo=true
NC_017154.1	Protein Homology	CDS	3040949	3041413	.	+	0	ID=cds2759;Parent=gene2800;end_range=3041413,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3041483	3041746	.	+	.	ID=gene2801;Name=YPD4_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14050
NC_017154.1	Protein Homology	CDS	3041483	3041746	.	+	0	ID=cds2760;Parent=gene2801;Dbxref=Genbank:WP_002212205.1;Name=WP_002212205.1;gbkey=CDS;product=transposase;protein_id=WP_002212205.1;transl_table=11
NC_017154.1	RefSeq	gene	3041829	3042014	.	+	.	ID=gene2802;Name=YPD4_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14055
NC_017154.1	Protein Homology	CDS	3041829	3042014	.	+	0	ID=cds2761;Parent=gene2802;Dbxref=Genbank:WP_002215393.1;Name=WP_002215393.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215393.1;transl_table=11
NC_017154.1	RefSeq	gene	3042177	3042428	.	-	.	ID=gene2803;Name=YPD4_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14060
NC_017154.1	Protein Homology	CDS	3042177	3042428	.	-	0	ID=cds2762;Parent=gene2803;Dbxref=Genbank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11
NC_017154.1	RefSeq	gene	3043139	3043906	.	+	.	ID=gene2804;Name=YPD4_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14065;old_locus_tag=YPD4_2384
NC_017154.1	Protein Homology	CDS	3043139	3043906	.	+	0	ID=cds2763;Parent=gene2804;Dbxref=Genbank:WP_002215390.1;Name=WP_002215390.1;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002215390.1;transl_table=11
NC_017154.1	RefSeq	gene	3044058	3044183	.	-	.	ID=gene2805;Name=YPD4_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14070
NC_017154.1	Protein Homology	CDS	3044058	3044183	.	-	0	ID=cds2764;Parent=gene2805;Dbxref=Genbank:WP_002215389.1;Name=WP_002215389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215389.1;transl_table=11
NC_017154.1	RefSeq	gene	3044238	3044525	.	+	.	ID=gene2806;Name=YPD4_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14075
NC_017154.1	Protein Homology	CDS	3044238	3044525	.	+	0	ID=cds2765;Parent=gene2806;Dbxref=Genbank:WP_044023375.1;Name=WP_044023375.1;gbkey=CDS;product=LexA regulated protein;protein_id=WP_044023375.1;transl_table=11
NC_017154.1	RefSeq	gene	3044924	3045452	.	+	.	ID=gene2807;Name=YPD4_RS14080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14080;pseudo=true
NC_017154.1	Protein Homology	CDS	3044924	3045452	.	+	0	ID=cds2766;Parent=gene2807;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flavodoxin FldA;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3045819	3046265	.	+	.	ID=gene2808;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=YPD4_RS14085;old_locus_tag=YPD4_2386
NC_017154.1	Protein Homology	CDS	3045819	3046265	.	+	0	ID=cds2767;Parent=gene2808;Dbxref=Genbank:WP_002210357.1;Name=WP_002210357.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulation protein;protein_id=WP_002210357.1;transl_table=11
NC_017154.1	RefSeq	gene	3046706	3049370	.	-	.	ID=gene2809;Name=YPD4_RS14090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14090;pseudo=true
NC_017154.1	Protein Homology	CDS	3046706	3049370	.	-	0	ID=cds2768;Parent=gene2809;exception=annotated by transcript or proteomic data;gbkey=CDS;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3049698	3051119	.	-	.	ID=gene2810;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=YPD4_RS14095;old_locus_tag=YPD4_2389
NC_017154.1	Protein Homology	CDS	3049698	3051119	.	-	0	ID=cds2769;Parent=gene2810;Dbxref=Genbank:WP_002210355.1;Name=WP_002210355.1;Note=outer membrane porin involved in the transport of chitooligosaccharides;gbkey=CDS;gene=chiP;product=porin;protein_id=WP_002210355.1;transl_table=11
NC_017154.1	RefSeq	gene	3051825	3053492	.	-	.	ID=gene2811;Name=YPD4_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14100;old_locus_tag=YPD4_2390
NC_017154.1	Protein Homology	CDS	3051825	3053492	.	-	0	ID=cds2770;Parent=gene2811;Dbxref=Genbank:WP_002210354.1;Name=WP_002210354.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_002210354.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3053582	3054305	.	+	.	ID=id224;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3053694	3054152	.	-	.	ID=gene2812;Name=YPD4_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14105;old_locus_tag=YPD4_2391
NC_017154.1	Protein Homology	CDS	3053694	3054152	.	-	0	ID=cds2771;Parent=gene2812;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	3054417	3056450	.	-	.	ID=gene2813;Name=YPD4_RS14110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14110;pseudo=true
NC_017154.1	Protein Homology	CDS	3054417	3056450	.	-	0	ID=cds2772;Parent=gene2813;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS N-acetyl glucosamine transporter subunit IIABC;pseudo=true;transl_except=(pos:complement(3055485..3055487)%2Caa:Other);transl_table=11
NC_017154.1	RefSeq	gene	3056850	3057650	.	+	.	ID=gene2814;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=YPD4_RS14115;old_locus_tag=YPD4_2394
NC_017154.1	Protein Homology	CDS	3056850	3057650	.	+	0	ID=cds2773;Parent=gene2814;Dbxref=Genbank:WP_002210352.1;Name=WP_002210352.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_002210352.1;transl_table=11
NC_017154.1	RefSeq	gene	3057670	3058815	.	+	.	ID=gene2815;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YPD4_RS14120;old_locus_tag=YPD4_2395
NC_017154.1	Protein Homology	CDS	3057670	3058815	.	+	0	ID=cds2774;Parent=gene2815;Dbxref=Genbank:WP_002210351.1;Name=WP_002210351.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002210351.1;transl_table=11
NC_017154.1	RefSeq	gene	3058832	3060058	.	+	.	ID=gene2816;Name=YPD4_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14125;old_locus_tag=YPD4_2396
NC_017154.1	Protein Homology	CDS	3058832	3060058	.	+	0	ID=cds2775;Parent=gene2816;Dbxref=Genbank:WP_002224863.1;Name=WP_002224863.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002224863.1;transl_table=11
NC_017154.1	RefSeq	gene	3060131	3060883	.	+	.	ID=gene2817;Name=YPD4_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14130;old_locus_tag=YPD4_2397
NC_017154.1	Protein Homology	CDS	3060131	3060883	.	+	0	ID=cds2776;Parent=gene2817;Dbxref=Genbank:WP_002210349.1;Name=WP_002210349.1;gbkey=CDS;product=UMP phosphatase;protein_id=WP_002210349.1;transl_table=11
NC_017154.1	RefSeq	gene	3061238	3062902	.	+	.	ID=gene2818;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=YPD4_RS14135;old_locus_tag=YPD4_2398
NC_017154.1	Protein Homology	CDS	3061238	3062902	.	+	0	ID=cds2777;Parent=gene2818;Dbxref=Genbank:WP_002210348.1;Name=WP_002210348.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=WP_002210348.1;transl_table=11
NC_017154.1	RefSeq	gene	3062951	3063088	.	-	.	ID=gene2819;Name=YPD4_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14140
NC_017154.1	Protein Homology	CDS	3062951	3063088	.	-	0	ID=cds2778;Parent=gene2819;Dbxref=Genbank:WP_002222587.1;Name=WP_002222587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222587.1;transl_table=11
NC_017154.1	RefSeq	gene	3063360	3063436	.	+	.	ID=gene2820;Name=YPD4_RS14145;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS14145;old_locus_tag=YPD4_t33
NC_017154.1	tRNAscan-SE	tRNA	3063360	3063436	.	+	.	ID=rna38;Parent=gene2820;anticodon=(pos:3063394..3063396);gbkey=tRNA;product=tRNA-Met
NC_017154.1	tRNAscan-SE	exon	3063360	3063436	.	+	.	ID=id225;Parent=rna38;anticodon=(pos:3063394..3063396);gbkey=tRNA;product=tRNA-Met
NC_017154.1	RefSeq	gene	3063444	3063528	.	+	.	ID=gene2821;Name=YPD4_RS14150;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS14150;old_locus_tag=YPD4_t34
NC_017154.1	tRNAscan-SE	tRNA	3063444	3063528	.	+	.	ID=rna39;Parent=gene2821;anticodon=(pos:3063478..3063480);gbkey=tRNA;product=tRNA-Leu
NC_017154.1	tRNAscan-SE	exon	3063444	3063528	.	+	.	ID=id226;Parent=rna39;anticodon=(pos:3063478..3063480);gbkey=tRNA;product=tRNA-Leu
NC_017154.1	RefSeq	gene	3063558	3063632	.	+	.	ID=gene2822;Name=YPD4_RS14155;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS14155;old_locus_tag=YPD4_t35
NC_017154.1	tRNAscan-SE	tRNA	3063558	3063632	.	+	.	ID=rna40;Parent=gene2822;anticodon=(pos:3063590..3063592);gbkey=tRNA;product=tRNA-Gln
NC_017154.1	tRNAscan-SE	exon	3063558	3063632	.	+	.	ID=id227;Parent=rna40;anticodon=(pos:3063590..3063592);gbkey=tRNA;product=tRNA-Gln
NC_017154.1	RefSeq	gene	3063716	3063790	.	+	.	ID=gene2823;Name=YPD4_RS14160;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS14160;old_locus_tag=YPD4_t36
NC_017154.1	tRNAscan-SE	tRNA	3063716	3063790	.	+	.	ID=rna41;Parent=gene2823;anticodon=(pos:3063748..3063750);gbkey=tRNA;product=tRNA-Gln
NC_017154.1	tRNAscan-SE	exon	3063716	3063790	.	+	.	ID=id228;Parent=rna41;anticodon=(pos:3063748..3063750);gbkey=tRNA;product=tRNA-Gln
NC_017154.1	RefSeq	gene	3063823	3063899	.	+	.	ID=gene2824;Name=YPD4_RS14165;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS14165;old_locus_tag=YPD4_t37
NC_017154.1	tRNAscan-SE	tRNA	3063823	3063899	.	+	.	ID=rna42;Parent=gene2824;anticodon=(pos:3063857..3063859);gbkey=tRNA;product=tRNA-Met
NC_017154.1	tRNAscan-SE	exon	3063823	3063899	.	+	.	ID=id229;Parent=rna42;anticodon=(pos:3063857..3063859);gbkey=tRNA;product=tRNA-Met
NC_017154.1	RefSeq	gene	3063905	3063979	.	+	.	ID=gene2825;Name=YPD4_RS14170;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS14170;old_locus_tag=YPD4_t38
NC_017154.1	tRNAscan-SE	tRNA	3063905	3063979	.	+	.	ID=rna43;Parent=gene2825;anticodon=(pos:3063937..3063939);gbkey=tRNA;product=tRNA-Gln
NC_017154.1	tRNAscan-SE	exon	3063905	3063979	.	+	.	ID=id230;Parent=rna43;anticodon=(pos:3063937..3063939);gbkey=tRNA;product=tRNA-Gln
NC_017154.1	RefSeq	gene	3064373	3065554	.	-	.	ID=gene2826;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=YPD4_RS14175;old_locus_tag=YPD4_2399
NC_017154.1	Protein Homology	CDS	3064373	3065554	.	-	0	ID=cds2779;Parent=gene2826;Dbxref=Genbank:WP_002210347.1;Name=WP_002210347.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_002210347.1;transl_table=11
NC_017154.1	RefSeq	gene	3065796	3067220	.	+	.	ID=gene2827;Name=YPD4_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14180;old_locus_tag=YPD4_2400
NC_017154.1	Protein Homology	CDS	3065796	3067220	.	+	0	ID=cds2780;Parent=gene2827;Dbxref=Genbank:WP_002227875.1;Name=WP_002227875.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;protein_id=WP_002227875.1;transl_table=11
NC_017154.1	RefSeq	gene	3067565	3068620	.	+	.	ID=gene2828;Name=YPD4_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14185;old_locus_tag=YPD4_2401
NC_017154.1	Protein Homology	CDS	3067565	3068620	.	+	0	ID=cds2781;Parent=gene2828;Dbxref=Genbank:WP_002354474.1;Name=WP_002354474.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_002354474.1;transl_table=11
NC_017154.1	RefSeq	gene	3068617	3069090	.	+	.	ID=gene2829;Name=YPD4_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14190;old_locus_tag=YPD4_2402
NC_017154.1	Protein Homology	CDS	3068617	3069090	.	+	0	ID=cds2782;Parent=gene2829;Dbxref=Genbank:WP_002210344.1;Name=WP_002210344.1;gbkey=CDS;product=endoribonuclease YbeY;protein_id=WP_002210344.1;transl_table=11
NC_017154.1	RefSeq	gene	3069208	3070086	.	+	.	ID=gene2830;Name=YPD4_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14195;old_locus_tag=YPD4_2403
NC_017154.1	Protein Homology	CDS	3069208	3070086	.	+	0	ID=cds2783;Parent=gene2830;Dbxref=Genbank:WP_015683979.1;Name=WP_015683979.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=cobalt transporter;protein_id=WP_015683979.1;transl_table=11
NC_017154.1	RefSeq	gene	3070094	3071641	.	+	.	ID=gene2831;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=YPD4_RS14200;old_locus_tag=YPD4_2404
NC_017154.1	Protein Homology	CDS	3070094	3071641	.	+	0	ID=cds2784;Parent=gene2831;Dbxref=Genbank:WP_002210341.1;Name=WP_002210341.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=WP_002210341.1;transl_table=11
NC_017154.1	RefSeq	gene	3072406	3073323	.	+	.	ID=gene2832;Name=YPD4_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14205;old_locus_tag=YPD4_2405
NC_017154.1	Protein Homology	CDS	3072406	3073323	.	+	0	ID=cds2785;Parent=gene2832;Dbxref=Genbank:WP_002210339.1;Name=WP_002210339.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210339.1;transl_table=11
NC_017154.1	RefSeq	gene	3073497	3074237	.	+	.	ID=gene2833;Name=YPD4_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14210;old_locus_tag=YPD4_2406
NC_017154.1	Protein Homology	CDS	3073497	3074237	.	+	0	ID=cds2786;Parent=gene2833;Dbxref=Genbank:WP_002223337.1;Name=WP_002223337.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_002223337.1;transl_table=11
NC_017154.1	RefSeq	gene	3074237	3074912	.	+	.	ID=gene2834;Name=YPD4_RS14215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14215;old_locus_tag=YPD4_2407;pseudo=true
NC_017154.1	Protein Homology	CDS	3074237	3074912	.	+	0	ID=cds2787;Parent=gene2834;exception=annotated by transcript or proteomic data;gbkey=CDS;product=amino acid ABC transporter permease;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3074912	3075637	.	+	.	ID=gene2835;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=YPD4_RS14220;old_locus_tag=YPD4_2408
NC_017154.1	Protein Homology	CDS	3074912	3075637	.	+	0	ID=cds2788;Parent=gene2835;Dbxref=Genbank:WP_002210336.1;Name=WP_002210336.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002210336.1;transl_table=11
NC_017154.1	RefSeq	gene	3075771	3076253	.	-	.	ID=gene2836;Name=YPD4_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14225;old_locus_tag=YPD4_2409
NC_017154.1	Protein Homology	CDS	3075771	3076253	.	-	0	ID=cds2789;Parent=gene2836;Dbxref=Genbank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210335.1;transl_table=11
NC_017154.1	RefSeq	gene	3076514	3079096	.	+	.	ID=gene2837;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=YPD4_RS14230;old_locus_tag=YPD4_2410
NC_017154.1	Protein Homology	CDS	3076514	3079096	.	+	0	ID=cds2790;Parent=gene2837;Dbxref=Genbank:WP_002210333.1;Name=WP_002210333.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11
NC_017154.1	RefSeq	gene	3079111	3079734	.	+	.	ID=gene2838;Name=YPD4_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14235;old_locus_tag=YPD4_2411
NC_017154.1	Protein Homology	CDS	3079111	3079734	.	+	0	ID=cds2791;Parent=gene2838;Dbxref=Genbank:WP_002210332.1;Name=WP_002210332.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210332.1;transl_table=11
NC_017154.1	RefSeq	gene	3079731	3080764	.	+	.	ID=gene2839;Name=holA;gbkey=Gene;gene=holA;gene_biotype=pseudogene;locus_tag=YPD4_RS14240;pseudo=true
NC_017154.1	Protein Homology	CDS	3079731	3080764	.	+	0	ID=cds2792;Parent=gene2839;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3080754	3081416	.	+	.	ID=gene2840;Name=YPD4_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14245;old_locus_tag=YPD4_2413
NC_017154.1	Protein Homology	CDS	3080754	3081416	.	+	0	ID=cds2793;Parent=gene2840;Dbxref=Genbank:WP_002210330.1;Name=WP_002210330.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_002210330.1;transl_table=11
NC_017154.1	RefSeq	gene	3081640	3081957	.	+	.	ID=gene2841;Name=YPD4_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14250;old_locus_tag=YPD4_2414
NC_017154.1	Protein Homology	CDS	3081640	3081957	.	+	0	ID=cds2794;Parent=gene2841;Dbxref=Genbank:WP_002210329.1;Name=WP_002210329.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_002210329.1;transl_table=11
NC_017154.1	RefSeq	gene	3081961	3082431	.	+	.	ID=gene2842;Name=YPD4_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14255;old_locus_tag=YPD4_2415
NC_017154.1	Protein Homology	CDS	3081961	3082431	.	+	0	ID=cds2795;Parent=gene2842;Dbxref=Genbank:WP_002210328.1;Name=WP_002210328.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase H;protein_id=WP_002210328.1;transl_table=11
NC_017154.1	RefSeq	gene	3082513	3084408	.	+	.	ID=gene2843;Name=YPD4_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14260;old_locus_tag=YPD4_2416
NC_017154.1	Protein Homology	CDS	3082513	3084408	.	+	0	ID=cds2796;Parent=gene2843;Dbxref=Genbank:WP_002210326.1;Name=WP_002210326.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_002210326.1;transl_table=11
NC_017154.1	RefSeq	gene	3084593	3085705	.	+	.	ID=gene2844;Name=YPD4_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14265;old_locus_tag=YPD4_2417
NC_017154.1	Protein Homology	CDS	3084593	3085705	.	+	0	ID=cds2797;Parent=gene2844;Dbxref=Genbank:WP_002210325.1;Name=WP_002210325.1;gbkey=CDS;product=cell wall shape-determining protein;protein_id=WP_002210325.1;transl_table=11
NC_017154.1	RefSeq	gene	3085715	3086796	.	+	.	ID=gene2845;Name=YPD4_RS14270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14270;pseudo=true
NC_017154.1	Protein Homology	CDS	3085715	3086796	.	+	0	ID=cds2798;Parent=gene2845;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3087199	3088401	.	+	.	ID=gene2846;Name=YPD4_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14275;old_locus_tag=YPD4_2420
NC_017154.1	Protein Homology	CDS	3087199	3088401	.	+	0	ID=cds2799;Parent=gene2846;Dbxref=Genbank:WP_002210323.1;Name=WP_002210323.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002210323.1;transl_table=11
NC_017154.1	RefSeq	gene	3088600	3088863	.	+	.	ID=gene2847;Name=YPD4_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14280
NC_017154.1	Protein Homology	CDS	3088600	3088863	.	+	0	ID=cds2800;Parent=gene2847;Dbxref=Genbank:WP_002210322.1;Name=WP_002210322.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210322.1;transl_table=11
NC_017154.1	RefSeq	gene	3089075	3089776	.	+	.	ID=gene2848;Name=YPD4_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14285;old_locus_tag=YPD4_2421
NC_017154.1	Protein Homology	CDS	3089075	3089776	.	+	0	ID=cds2801;Parent=gene2848;Dbxref=Genbank:WP_002218201.1;Name=WP_002218201.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=octanoyltransferase;protein_id=WP_002218201.1;transl_table=11
NC_017154.1	RefSeq	gene	3089969	3090934	.	+	.	ID=gene2849;Name=YPD4_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14290;old_locus_tag=YPD4_2422
NC_017154.1	Protein Homology	CDS	3089969	3090934	.	+	0	ID=cds2802;Parent=gene2849;Dbxref=Genbank:WP_002210320.1;Name=WP_002210320.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11
NC_017154.1	RefSeq	gene	3091115	3091372	.	-	.	ID=gene2850;Name=YPD4_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14295
NC_017154.1	Protein Homology	CDS	3091115	3091372	.	-	0	ID=cds2803;Parent=gene2850;Dbxref=Genbank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;product=sec-independent protein translocase tatE;protein_id=WP_002210319.1;transl_table=11
NC_017154.1	RefSeq	gene	3091427	3091579	.	-	.	ID=gene2851;Name=YPD4_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14300
NC_017154.1	Protein Homology	CDS	3091427	3091579	.	-	0	ID=cds2804;Parent=gene2851;Dbxref=Genbank:WP_002210318.1;Name=WP_002210318.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210318.1;transl_table=11
NC_017154.1	RefSeq	gene	3091939	3092322	.	+	.	ID=gene2852;Name=YPD4_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14305;old_locus_tag=YPD4_2423
NC_017154.1	Protein Homology	CDS	3091939	3092322	.	+	0	ID=cds2805;Parent=gene2852;Dbxref=Genbank:WP_015683984.1;Name=WP_015683984.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=WP_015683984.1;transl_table=11
NC_017154.1	cmsearch	region	3092699	3093127	.	-	.	ID=id231;Note=cspA;gbkey=misc_feature
NC_017154.1	RefSeq	gene	3092745	3092954	.	-	.	ID=gene2853;Name=YPD4_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14310
NC_017154.1	Protein Homology	CDS	3092745	3092954	.	-	0	ID=cds2806;Parent=gene2853;Dbxref=Genbank:WP_002210315.1;Name=WP_002210315.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210315.1;transl_table=11
NC_017154.1	RefSeq	gene	3093233	3093712	.	+	.	ID=gene2854;Name=YPD4_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14315;old_locus_tag=YPD4_2424
NC_017154.1	Protein Homology	CDS	3093233	3093712	.	+	0	ID=cds2807;Parent=gene2854;Dbxref=Genbank:WP_012229509.1;Name=WP_012229509.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_012229509.1;transl_table=11
NC_017154.1	RefSeq	gene	3094022	3094612	.	-	.	ID=gene2855;Name=YPD4_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14320;old_locus_tag=YPD4_2425
NC_017154.1	Protein Homology	CDS	3094022	3094612	.	-	0	ID=cds2808;Parent=gene2855;Dbxref=Genbank:WP_002210313.1;Name=WP_002210313.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002210313.1;transl_table=11
NC_017154.1	RefSeq	gene	3095062	3096015	.	+	.	ID=gene2856;Name=YPD4_RS14325;end_range=3096015,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14325;old_locus_tag=YPD4_2426;partial=true;pseudo=true
NC_017154.1	Protein Homology	CDS	3095062	3096015	.	+	0	ID=cds2809;Parent=gene2856;end_range=3096015,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3096210	3096392	.	+	.	ID=gene2857;Name=YPD4_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14330
NC_017154.1	Protein Homology	CDS	3096210	3096392	.	+	0	ID=cds2810;Parent=gene2857;Dbxref=Genbank:WP_002210311.1;Name=WP_002210311.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210311.1;transl_table=11
NC_017154.1	RefSeq	gene	3096412	3096606	.	-	.	ID=gene2858;Name=YPD4_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14335
NC_017154.1	Protein Homology	CDS	3096412	3096606	.	-	0	ID=cds2811;Parent=gene2858;Dbxref=Genbank:WP_002210310.1;Name=WP_002210310.1;gbkey=CDS;product=glycogen synthase;protein_id=WP_002210310.1;transl_table=11
NC_017154.1	RefSeq	gene	3097049	3097336	.	+	.	ID=gene2859;Name=YPD4_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14340
NC_017154.1	Protein Homology	CDS	3097049	3097336	.	+	0	ID=cds2812;Parent=gene2859;Dbxref=Genbank:WP_002210309.1;Name=WP_002210309.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002210309.1;transl_table=11
NC_017154.1	RefSeq	gene	3097352	3099142	.	-	.	ID=gene2860;Name=YPD4_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14345;old_locus_tag=YPD4_2427
NC_017154.1	Protein Homology	CDS	3097352	3099142	.	-	0	ID=cds2813;Parent=gene2860;Dbxref=Genbank:WP_002214723.1;Name=WP_002214723.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002214723.1;transl_table=11
NC_017154.1	RefSeq	gene	3099350	3099553	.	-	.	ID=gene2861;Name=YPD4_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14350
NC_017154.1	Protein Homology	CDS	3099350	3099553	.	-	0	ID=cds2814;Parent=gene2861;Dbxref=Genbank:WP_002214722.1;Name=WP_002214722.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214722.1;transl_table=11
NC_017154.1	RefSeq	gene	3099712	3100527	.	-	.	ID=gene2862;Name=YPD4_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14355;old_locus_tag=YPD4_2429
NC_017154.1	Protein Homology	CDS	3099712	3100527	.	-	0	ID=cds2815;Parent=gene2862;Dbxref=Genbank:WP_002210306.1;Name=WP_002210306.1;gbkey=CDS;product=5-deoxy-glucuronate isomerase;protein_id=WP_002210306.1;transl_table=11
NC_017154.1	RefSeq	gene	3100537	3101457	.	-	.	ID=gene2863;Name=YPD4_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14360;old_locus_tag=YPD4_2430
NC_017154.1	Protein Homology	CDS	3100537	3101457	.	-	0	ID=cds2816;Parent=gene2863;Dbxref=Genbank:WP_002227877.1;Name=WP_002227877.1;gbkey=CDS;product=myo-inosose-2 dehydratase;protein_id=WP_002227877.1;transl_table=11
NC_017154.1	RefSeq	gene	3101610	3103487	.	-	.	ID=gene2864;Name=YPD4_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14365;old_locus_tag=YPD4_2431
NC_017154.1	Protein Homology	CDS	3101610	3103487	.	-	0	ID=cds2817;Parent=gene2864;Dbxref=Genbank:WP_002222597.1;Name=WP_002222597.1;gbkey=CDS;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_002222597.1;transl_table=11
NC_017154.1	RefSeq	gene	3103612	3104745	.	-	.	ID=gene2865;Name=YPD4_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14370;old_locus_tag=YPD4_2432
NC_017154.1	Protein Homology	CDS	3103612	3104745	.	-	0	ID=cds2818;Parent=gene2865;Dbxref=Genbank:WP_002210303.1;Name=WP_002210303.1;gbkey=CDS;product=myo-inositol 2-dehydrogenase;protein_id=WP_002210303.1;transl_table=11
NC_017154.1	RefSeq	gene	3104769	3105797	.	-	.	ID=gene2866;Name=YPD4_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14375;old_locus_tag=YPD4_2433
NC_017154.1	Protein Homology	CDS	3104769	3105797	.	-	0	ID=cds2819;Parent=gene2866;Dbxref=Genbank:WP_002210302.1;Name=WP_002210302.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210302.1;transl_table=11
NC_017154.1	RefSeq	gene	3105809	3107356	.	-	.	ID=gene2867;Name=YPD4_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14380;old_locus_tag=YPD4_2434
NC_017154.1	Protein Homology	CDS	3105809	3107356	.	-	0	ID=cds2820;Parent=gene2867;Dbxref=Genbank:WP_002223323.1;Name=WP_002223323.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=asparaginase;protein_id=WP_002223323.1;transl_table=11
NC_017154.1	RefSeq	gene	3107405	3108334	.	-	.	ID=gene2868;Name=YPD4_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14385;old_locus_tag=YPD4_2435
NC_017154.1	Protein Homology	CDS	3107405	3108334	.	-	0	ID=cds2821;Parent=gene2868;Dbxref=Genbank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210300.1;transl_table=11
NC_017154.1	RefSeq	gene	3108460	3109445	.	-	.	ID=gene2869;Name=YPD4_RS14390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14390;pseudo=true
NC_017154.1	Protein Homology	CDS	3108460	3109445	.	-	0	ID=cds2822;Parent=gene2869;exception=annotated by transcript or proteomic data;gbkey=CDS;product=inositol 2-dehydrogenase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3109739	3111664	.	-	.	ID=gene2870;Name=YPD4_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14395;old_locus_tag=YPD4_2438
NC_017154.1	Protein Homology	CDS	3109739	3111664	.	-	0	ID=cds2823;Parent=gene2870;Dbxref=Genbank:WP_002359655.1;Name=WP_002359655.1;gbkey=CDS;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase;protein_id=WP_002359655.1;transl_table=11
NC_017154.1	RefSeq	gene	3111699	3113225	.	-	.	ID=gene2871;Name=YPD4_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14400;old_locus_tag=YPD4_2439
NC_017154.1	Protein Homology	CDS	3111699	3113225	.	-	0	ID=cds2824;Parent=gene2871;Dbxref=Genbank:WP_002210297.1;Name=WP_002210297.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002210297.1;transl_table=11
NC_017154.1	RefSeq	gene	3113531	3114385	.	+	.	ID=gene2872;Name=YPD4_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14405;old_locus_tag=YPD4_2440
NC_017154.1	Protein Homology	CDS	3113531	3114385	.	+	0	ID=cds2825;Parent=gene2872;Dbxref=Genbank:WP_002210296.1;Name=WP_002210296.1;gbkey=CDS;product=(Fe-S)-cluster assembly protein;protein_id=WP_002210296.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3114389	3114658	.	+	.	ID=id232;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3115019	3115567	.	+	.	ID=gene2873;Name=YPD4_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14410;old_locus_tag=YPD4_2441
NC_017154.1	Protein Homology	CDS	3115019	3115567	.	+	0	ID=cds2826;Parent=gene2873;Dbxref=Genbank:WP_002214718.1;Name=WP_002214718.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214718.1;transl_table=11
NC_017154.1	RefSeq	gene	3115974	3121952	.	+	.	ID=gene2874;Name=YPD4_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14415;old_locus_tag=YPD4_2442
NC_017154.1	Protein Homology	CDS	3115974	3121952	.	+	0	ID=cds2827;Parent=gene2874;Dbxref=Genbank:WP_002210294.1;Name=WP_002210294.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210294.1;transl_table=11
NC_017154.1	RefSeq	gene	3122009	3122887	.	+	.	ID=gene2875;Name=YPD4_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14420;old_locus_tag=YPD4_2443
NC_017154.1	Protein Homology	CDS	3122009	3122887	.	+	0	ID=cds2828;Parent=gene2875;Dbxref=Genbank:WP_002214717.1;Name=WP_002214717.1;gbkey=CDS;product=transglycosylase;protein_id=WP_002214717.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3122849	3124166	.	+	.	ID=id233;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3122921	3124129	.	+	.	ID=gene2876;Name=YPD4_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14425;old_locus_tag=YPD4_2444
NC_017154.1	Protein Homology	CDS	3122921	3124129	.	+	0	ID=cds2829;Parent=gene2876;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	3124151	3124405	.	-	.	ID=gene2877;Name=YPD4_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14430
NC_017154.1	Protein Homology	CDS	3124151	3124405	.	-	0	ID=cds2830;Parent=gene2877;Dbxref=Genbank:WP_002210293.1;Name=WP_002210293.1;gbkey=CDS;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002210293.1;transl_table=11
NC_017154.1	RefSeq	gene	3124574	3125017	.	-	.	ID=gene2878;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=YPD4_RS14435;old_locus_tag=YPD4_2445
NC_017154.1	Protein Homology	CDS	3124574	3125017	.	-	0	ID=cds2831;Parent=gene2878;Dbxref=Genbank:WP_002210291.1;Name=WP_002210291.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;product=PTS ascorbate transporter subunit IIA;protein_id=WP_002210291.1;transl_table=11
NC_017154.1	RefSeq	gene	3125384	3126418	.	+	.	ID=gene2879;Name=YPD4_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14440;old_locus_tag=YPD4_2446
NC_017154.1	Protein Homology	CDS	3125384	3126418	.	+	0	ID=cds2832;Parent=gene2879;Dbxref=Genbank:WP_002216059.1;Name=WP_002216059.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002216059.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3126500	3126670	.	+	.	ID=id234;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3126684	3128822	.	-	.	ID=gene2880;Name=YPD4_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14445;old_locus_tag=YPD4_2447
NC_017154.1	Protein Homology	CDS	3126684	3128822	.	-	0	ID=cds2833;Parent=gene2880;Dbxref=Genbank:WP_002265141.1;Name=WP_002265141.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_002265141.1;transl_table=11
NC_017154.1	RefSeq	gene	3129005	3130207	.	-	.	ID=gene2881;Name=YPD4_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14450;old_locus_tag=YPD4_2448
NC_017154.1	Protein Homology	CDS	3129005	3130207	.	-	0	ID=cds2834;Parent=gene2881;Dbxref=Genbank:WP_002210288.1;Name=WP_002210288.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_002210288.1;transl_table=11
NC_017154.1	RefSeq	gene	3130197	3130388	.	-	.	ID=gene2882;Name=YPD4_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14455
NC_017154.1	Protein Homology	CDS	3130197	3130388	.	-	0	ID=cds2835;Parent=gene2882;Dbxref=Genbank:WP_002216055.1;Name=WP_002216055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216055.1;transl_table=11
NC_017154.1	RefSeq	gene	3130629	3131084	.	+	.	ID=gene2883;Name=YPD4_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14460;old_locus_tag=YPD4_2449
NC_017154.1	Protein Homology	CDS	3130629	3131084	.	+	0	ID=cds2836;Parent=gene2883;Dbxref=Genbank:WP_002210287.1;Name=WP_002210287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210287.1;transl_table=11
NC_017154.1	RefSeq	gene	3131408	3131902	.	+	.	ID=gene2884;Name=YPD4_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14465;old_locus_tag=YPD4_2450
NC_017154.1	Protein Homology	CDS	3131408	3131902	.	+	0	ID=cds2837;Parent=gene2884;Dbxref=Genbank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210286.1;transl_table=11
NC_017154.1	RefSeq	gene	3132067	3132723	.	+	.	ID=gene2885;Name=YPD4_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14470;old_locus_tag=YPD4_2451
NC_017154.1	Protein Homology	CDS	3132067	3132723	.	+	0	ID=cds2838;Parent=gene2885;Dbxref=Genbank:WP_002210285.1;Name=WP_002210285.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210285.1;transl_table=11
NC_017154.1	RefSeq	gene	3133015	3134847	.	+	.	ID=gene2886;Name=YPD4_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14475;old_locus_tag=YPD4_2452
NC_017154.1	Protein Homology	CDS	3133015	3134847	.	+	0	ID=cds2839;Parent=gene2886;Dbxref=Genbank:WP_002227880.1;Name=WP_002227880.1;gbkey=CDS;product=citrate transporter;protein_id=WP_002227880.1;transl_table=11
NC_017154.1	RefSeq	gene	3134952	3135143	.	+	.	ID=gene2887;Name=YPD4_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14480
NC_017154.1	Protein Homology	CDS	3134952	3135143	.	+	0	ID=cds2840;Parent=gene2887;Dbxref=Genbank:WP_002216053.1;Name=WP_002216053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216053.1;transl_table=11
NC_017154.1	RefSeq	gene	3135190	3135783	.	-	.	ID=gene2888;Name=YPD4_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14485;old_locus_tag=YPD4_2453
NC_017154.1	Protein Homology	CDS	3135190	3135783	.	-	0	ID=cds2841;Parent=gene2888;Dbxref=Genbank:WP_002210283.1;Name=WP_002210283.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002210283.1;transl_table=11
NC_017154.1	RefSeq	gene	3135934	3137148	.	-	.	ID=gene2889;Name=YPD4_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14490;old_locus_tag=YPD4_2454
NC_017154.1	Protein Homology	CDS	3135934	3137148	.	-	0	ID=cds2842;Parent=gene2889;Dbxref=Genbank:WP_002210282.1;Name=WP_002210282.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase;protein_id=WP_002210282.1;transl_table=11
NC_017154.1	RefSeq	gene	3137281	3137553	.	+	.	ID=gene2890;Name=YPD4_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14495
NC_017154.1	Protein Homology	CDS	3137281	3137553	.	+	0	ID=cds2843;Parent=gene2890;Dbxref=Genbank:WP_002217838.1;Name=WP_002217838.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217838.1;transl_table=11
NC_017154.1	RefSeq	gene	3138004	3138936	.	+	.	ID=gene2891;Name=YPD4_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14500;old_locus_tag=YPD4_2455
NC_017154.1	Protein Homology	CDS	3138004	3138936	.	+	0	ID=cds2844;Parent=gene2891;Dbxref=Genbank:WP_002210280.1;Name=WP_002210280.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210280.1;transl_table=11
NC_017154.1	RefSeq	gene	3139614	3140114	.	+	.	ID=gene2892;Name=YPD4_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14505;old_locus_tag=YPD4_2456
NC_017154.1	Protein Homology	CDS	3139614	3140114	.	+	0	ID=cds2845;Parent=gene2892;Dbxref=Genbank:WP_002210279.1;Name=WP_002210279.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002210279.1;transl_table=11
NC_017154.1	RefSeq	gene	3140216	3140893	.	+	.	ID=gene2893;Name=YPD4_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14510;old_locus_tag=YPD4_2457
NC_017154.1	Protein Homology	CDS	3140216	3140893	.	+	0	ID=cds2846;Parent=gene2893;Dbxref=Genbank:WP_002210278.1;Name=WP_002210278.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_002210278.1;transl_table=11
NC_017154.1	RefSeq	gene	3141034	3142830	.	+	.	ID=gene2894;Name=YPD4_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14515;old_locus_tag=YPD4_2458
NC_017154.1	Protein Homology	CDS	3141034	3142830	.	+	0	ID=cds2847;Parent=gene2894;Dbxref=Genbank:WP_002210277.1;Name=WP_002210277.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11
NC_017154.1	RefSeq	gene	3142833	3143396	.	+	.	ID=gene2895;Name=YPD4_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14520;old_locus_tag=YPD4_2459
NC_017154.1	Protein Homology	CDS	3142833	3143396	.	+	0	ID=cds2848;Parent=gene2895;Dbxref=Genbank:WP_002228514.1;Name=WP_002228514.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=WP_002228514.1;transl_table=11
NC_017154.1	RefSeq	gene	3143393	3144778	.	+	.	ID=gene2896;Name=YPD4_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14525;old_locus_tag=YPD4_2460
NC_017154.1	Protein Homology	CDS	3143393	3144778	.	+	0	ID=cds2849;Parent=gene2896;Dbxref=Genbank:WP_002210276.1;Name=WP_002210276.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase subunit F;protein_id=WP_002210276.1;transl_table=11
NC_017154.1	RefSeq	gene	3144865	3147609	.	+	.	ID=gene2897;Name=YPD4_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14530;old_locus_tag=YPD4_2461
NC_017154.1	Protein Homology	CDS	3144865	3147609	.	+	0	ID=cds2850;Parent=gene2897;Dbxref=Genbank:WP_002210275.1;Name=WP_002210275.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_002210275.1;transl_table=11
NC_017154.1	RefSeq	gene	3147606	3148583	.	+	.	ID=gene2898;Name=YPD4_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14535;old_locus_tag=YPD4_2462
NC_017154.1	Protein Homology	CDS	3147606	3148583	.	+	0	ID=cds2851;Parent=gene2898;Dbxref=Genbank:WP_002210274.1;Name=WP_002210274.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_002210274.1;transl_table=11
NC_017154.1	RefSeq	gene	3148598	3149140	.	+	.	ID=gene2899;Name=YPD4_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14540;old_locus_tag=YPD4_2463
NC_017154.1	Protein Homology	CDS	3148598	3149140	.	+	0	ID=cds2852;Parent=gene2899;Dbxref=Genbank:WP_002210273.1;Name=WP_002210273.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit I;protein_id=WP_002210273.1;transl_table=11
NC_017154.1	RefSeq	gene	3149153	3149698	.	+	.	ID=gene2900;Name=YPD4_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14545;old_locus_tag=YPD4_2464
NC_017154.1	Protein Homology	CDS	3149153	3149698	.	+	0	ID=cds2853;Parent=gene2900;Dbxref=Genbank:WP_002210272.1;Name=WP_002210272.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_002210272.1;transl_table=11
NC_017154.1	RefSeq	gene	3149695	3149997	.	+	.	ID=gene2901;Name=YPD4_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14550;old_locus_tag=YPD4_2465
NC_017154.1	Protein Homology	CDS	3149695	3149997	.	+	0	ID=cds2854;Parent=gene2901;Dbxref=Genbank:WP_002210271.1;Name=WP_002210271.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_002210271.1;transl_table=11
NC_017154.1	RefSeq	gene	3149994	3151838	.	+	.	ID=gene2902;Name=YPD4_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14555;old_locus_tag=YPD4_2466
NC_017154.1	Protein Homology	CDS	3149994	3151838	.	+	0	ID=cds2855;Parent=gene2902;Dbxref=Genbank:WP_002210270.1;Name=WP_002210270.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_002210270.1;transl_table=11
NC_017154.1	RefSeq	gene	3151878	3153410	.	+	.	ID=gene2903;Name=YPD4_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14560;old_locus_tag=YPD4_2467
NC_017154.1	Protein Homology	CDS	3151878	3153410	.	+	0	ID=cds2856;Parent=gene2903;Dbxref=Genbank:WP_002210269.1;Name=WP_002210269.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_002210269.1;transl_table=11
NC_017154.1	RefSeq	gene	3153417	3154880	.	+	.	ID=gene2904;Name=YPD4_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14565;old_locus_tag=YPD4_2468
NC_017154.1	Protein Homology	CDS	3153417	3154880	.	+	0	ID=cds2857;Parent=gene2904;Dbxref=Genbank:WP_002210268.1;Name=WP_002210268.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_002210268.1;transl_table=11
NC_017154.1	RefSeq	gene	3155116	3156306	.	+	.	ID=gene2905;Name=YPD4_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14570;old_locus_tag=YPD4_2469
NC_017154.1	Protein Homology	CDS	3155116	3156306	.	+	0	ID=cds2858;Parent=gene2905;Dbxref=Genbank:WP_002210267.1;Name=WP_002210267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210267.1;transl_table=11
NC_017154.1	RefSeq	gene	3156658	3157125	.	-	.	ID=gene2906;Name=YPD4_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14575;old_locus_tag=YPD4_2470
NC_017154.1	Protein Homology	CDS	3156658	3157125	.	-	0	ID=cds2859;Parent=gene2906;Dbxref=Genbank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210266.1;transl_table=11
NC_017154.1	RefSeq	gene	3157203	3157739	.	-	.	ID=gene2907;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPD4_RS14580;old_locus_tag=YPD4_2471
NC_017154.1	Protein Homology	CDS	3157203	3157739	.	-	0	ID=cds2860;Parent=gene2907;Dbxref=Genbank:WP_002210265.1;Name=WP_002210265.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_002210265.1;transl_table=11
NC_017154.1	RefSeq	gene	3157788	3158552	.	-	.	ID=gene2908;Name=YPD4_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14585;old_locus_tag=YPD4_2472
NC_017154.1	Protein Homology	CDS	3157788	3158552	.	-	0	ID=cds2861;Parent=gene2908;Dbxref=Genbank:WP_002210264.1;Name=WP_002210264.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=WP_002210264.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3158581	3158758	.	+	.	ID=id235;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3159311	3160594	.	-	.	ID=gene2909;Name=YPD4_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14590;old_locus_tag=YPD4_2473
NC_017154.1	Protein Homology	CDS	3159311	3160594	.	-	0	ID=cds2862;Parent=gene2909;Dbxref=Genbank:WP_002210262.1;Name=WP_002210262.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210262.1;transl_table=11
NC_017154.1	RefSeq	gene	3161063	3162055	.	+	.	ID=gene2910;Name=YPD4_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14595;old_locus_tag=YPD4_2474
NC_017154.1	Protein Homology	CDS	3161063	3162055	.	+	0	ID=cds2863;Parent=gene2910;Dbxref=Genbank:WP_002210260.1;Name=WP_002210260.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210260.1;transl_table=11
NC_017154.1	RefSeq	gene	3162380	3162502	.	+	.	ID=gene2911;Name=YPD4_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14600
NC_017154.1	Protein Homology	CDS	3162380	3162502	.	+	0	ID=cds2864;Parent=gene2911;Dbxref=Genbank:WP_002210258.1;Name=WP_002210258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210258.1;transl_table=11
NC_017154.1	RefSeq	gene	3162521	3163471	.	+	.	ID=gene2912;Name=YPD4_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14605;old_locus_tag=YPD4_2475
NC_017154.1	Protein Homology	CDS	3162521	3163471	.	+	0	ID=cds2865;Parent=gene2912;Dbxref=Genbank:WP_002210257.1;Name=WP_002210257.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_002210257.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3163492	3163664	.	+	.	ID=id236;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3164017	3165333	.	+	.	ID=gene2913;Name=YPD4_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14610;old_locus_tag=YPD4_2476
NC_017154.1	Protein Homology	CDS	3164017	3165333	.	+	0	ID=cds2866;Parent=gene2913;Dbxref=Genbank:WP_002215889.1;Name=WP_002215889.1;gbkey=CDS;product=2-ketogluconate transporter;protein_id=WP_002215889.1;transl_table=11
NC_017154.1	RefSeq	gene	3165363	3165878	.	+	.	ID=gene2914;Name=YPD4_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14615;old_locus_tag=YPD4_2477
NC_017154.1	Protein Homology	CDS	3165363	3165878	.	+	0	ID=cds2867;Parent=gene2914;Dbxref=Genbank:WP_002210255.1;Name=WP_002210255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210255.1;transl_table=11
NC_017154.1	RefSeq	gene	3165888	3167759	.	+	.	ID=gene2915;Name=YPD4_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14620;old_locus_tag=YPD4_2478
NC_017154.1	Protein Homology	CDS	3165888	3167759	.	+	0	ID=cds2868;Parent=gene2915;Dbxref=Genbank:WP_002210254.1;Name=WP_002210254.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=WP_002210254.1;transl_table=11
NC_017154.1	RefSeq	gene	3167825	3168037	.	+	.	ID=gene2916;Name=YPD4_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14625
NC_017154.1	Protein Homology	CDS	3167825	3168037	.	+	0	ID=cds2869;Parent=gene2916;Dbxref=Genbank:WP_002215888.1;Name=WP_002215888.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215888.1;transl_table=11
NC_017154.1	RefSeq	gene	3167978	3168121	.	-	.	ID=gene2917;Name=YPD4_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14630
NC_017154.1	Protein Homology	CDS	3167978	3168121	.	-	0	ID=cds2870;Parent=gene2917;Dbxref=Genbank:WP_002210253.1;Name=WP_002210253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210253.1;transl_table=11
NC_017154.1	RefSeq	gene	3168685	3168993	.	+	.	ID=gene2918;Name=YPD4_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14635;old_locus_tag=YPD4_2479
NC_017154.1	Protein Homology	CDS	3168685	3168993	.	+	0	ID=cds2871;Parent=gene2918;Dbxref=Genbank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210251.1;transl_table=11
NC_017154.1	RefSeq	gene	3169548	3170192	.	+	.	ID=gene2919;Name=YPD4_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14640;old_locus_tag=YPD4_2480
NC_017154.1	Protein Homology	CDS	3169548	3170192	.	+	0	ID=cds2872;Parent=gene2919;Dbxref=Genbank:WP_002210249.1;Name=WP_002210249.1;gbkey=CDS;product=protein RhiA;protein_id=WP_002210249.1;transl_table=11
NC_017154.1	RefSeq	gene	3170720	3172087	.	+	.	ID=gene2920;Name=YPD4_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14645;old_locus_tag=YPD4_2481
NC_017154.1	Protein Homology	CDS	3170720	3172087	.	+	0	ID=cds2873;Parent=gene2920;Dbxref=Genbank:WP_002210248.1;Name=WP_002210248.1;gbkey=CDS;product=menaquinone-specific isochorismate synthase;protein_id=WP_002210248.1;transl_table=11
NC_017154.1	RefSeq	gene	3172315	3174018	.	+	.	ID=gene2921;Name=YPD4_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14650;old_locus_tag=YPD4_2482
NC_017154.1	Protein Homology	CDS	3172315	3174018	.	+	0	ID=cds2874;Parent=gene2921;Dbxref=Genbank:WP_002210247.1;Name=WP_002210247.1;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=WP_002210247.1;transl_table=11
NC_017154.1	RefSeq	gene	3174015	3174833	.	+	.	ID=gene2922;Name=YPD4_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14655;old_locus_tag=YPD4_2483
NC_017154.1	Protein Homology	CDS	3174015	3174833	.	+	0	ID=cds2875;Parent=gene2922;Dbxref=Genbank:WP_002210246.1;Name=WP_002210246.1;gbkey=CDS;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_002210246.1;transl_table=11
NC_017154.1	RefSeq	gene	3174847	3175705	.	+	.	ID=gene2923;Name=YPD4_RS14660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14660;pseudo=true
NC_017154.1	Protein Homology	CDS	3174847	3175705	.	+	0	ID=cds2876;Parent=gene2923;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;exception=annotated by transcript or proteomic data;gbkey=CDS;product=dihydroxynaphthoic acid synthetase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3175705	3176676	.	+	.	ID=gene2924;Name=YPD4_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14665;old_locus_tag=YPD4_2485
NC_017154.1	Protein Homology	CDS	3175705	3176676	.	+	0	ID=cds2877;Parent=gene2924;Dbxref=Genbank:WP_002210244.1;Name=WP_002210244.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;product=o-succinylbenzoate synthase;protein_id=WP_002210244.1;transl_table=11
NC_017154.1	RefSeq	gene	3176664	3178079	.	+	.	ID=gene2925;Name=YPD4_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14670;old_locus_tag=YPD4_2486
NC_017154.1	Protein Homology	CDS	3176664	3178079	.	+	0	ID=cds2878;Parent=gene2925;Dbxref=Genbank:WP_002210243.1;Name=WP_002210243.1;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;protein_id=WP_002210243.1;transl_table=11
NC_017154.1	RefSeq	gene	3178145	3179104	.	+	.	ID=gene2926;Name=YPD4_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14675;old_locus_tag=YPD4_2487
NC_017154.1	Protein Homology	CDS	3178145	3179104	.	+	0	ID=cds2879;Parent=gene2926;Dbxref=Genbank:WP_002210242.1;Name=WP_002210242.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210242.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3179149	3179322	.	+	.	ID=id237;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3179486	3179746	.	-	.	ID=gene2927;Name=YPD4_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14680
NC_017154.1	Protein Homology	CDS	3179486	3179746	.	-	0	ID=cds2880;Parent=gene2927;Dbxref=Genbank:WP_002210240.1;Name=WP_002210240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210240.1;transl_table=11
NC_017154.1	RefSeq	gene	3180034	3181044	.	+	.	ID=gene2928;Name=YPD4_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14685;old_locus_tag=YPD4_2488
NC_017154.1	Protein Homology	CDS	3180034	3181044	.	+	0	ID=cds2881;Parent=gene2928;Dbxref=Genbank:WP_002210239.1;Name=WP_002210239.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase F;protein_id=WP_002210239.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3181561	3181735	.	+	.	ID=id238;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	3181838	3183796	.	+	.	ID=id239;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3181906	3182685	.	-	.	ID=gene2929;Name=YPD4_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14690;old_locus_tag=YPD4_2489
NC_017154.1	Protein Homology	CDS	3181906	3182685	.	-	0	ID=cds2882;Parent=gene2929;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	3182685	3183707	.	-	.	ID=gene2930;Name=YPD4_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14695;old_locus_tag=YPD4_2490
NC_017154.1	Protein Homology	CDS	3182685	3183707	.	-	0	ID=cds2883;Parent=gene2930;Dbxref=Genbank:WP_015683987.1;Name=WP_015683987.1;gbkey=CDS;product=transposase;protein_id=WP_015683987.1;transl_table=11
NC_017154.1	RefSeq	gene	3183801	3184694	.	+	.	ID=gene2931;Name=YPD4_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14700;old_locus_tag=YPD4_2491
NC_017154.1	Protein Homology	CDS	3183801	3184694	.	+	0	ID=cds2884;Parent=gene2931;Dbxref=Genbank:WP_002209764.1;Name=WP_002209764.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209764.1;transl_table=11
NC_017154.1	RefSeq	gene	3184749	3185738	.	-	.	ID=gene2932;Name=YPD4_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14705;old_locus_tag=YPD4_2492
NC_017154.1	Protein Homology	CDS	3184749	3185738	.	-	0	ID=cds2885;Parent=gene2932;Dbxref=Genbank:WP_002209763.1;Name=WP_002209763.1;gbkey=CDS;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11
NC_017154.1	RefSeq	gene	3185764	3186615	.	-	.	ID=gene2933;Name=YPD4_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14710;old_locus_tag=YPD4_2493
NC_017154.1	Protein Homology	CDS	3185764	3186615	.	-	0	ID=cds2886;Parent=gene2933;Dbxref=Genbank:WP_002209762.1;Name=WP_002209762.1;gbkey=CDS;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_002209762.1;transl_table=11
NC_017154.1	RefSeq	gene	3186806	3186931	.	+	.	ID=gene2934;Name=YPD4_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14715
NC_017154.1	Protein Homology	CDS	3186806	3186931	.	+	0	ID=cds2887;Parent=gene2934;Dbxref=Genbank:WP_002215246.1;Name=WP_002215246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215246.1;transl_table=11
NC_017154.1	RefSeq	gene	3186928	3187071	.	+	.	ID=gene2935;Name=YPD4_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14720
NC_017154.1	Protein Homology	CDS	3186928	3187071	.	+	0	ID=cds2888;Parent=gene2935;Dbxref=Genbank:WP_002215244.1;Name=WP_002215244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215244.1;transl_table=11
NC_017154.1	RefSeq	gene	3187088	3188716	.	+	.	ID=gene2936;Name=YPD4_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14725;old_locus_tag=YPD4_2494
NC_017154.1	Protein Homology	CDS	3187088	3188716	.	+	0	ID=cds2889;Parent=gene2936;Dbxref=Genbank:WP_002209759.1;Name=WP_002209759.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209759.1;transl_table=11
NC_017154.1	RefSeq	gene	3188795	3191176	.	-	.	ID=gene2937;Name=YPD4_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14730;old_locus_tag=YPD4_2495
NC_017154.1	Protein Homology	CDS	3188795	3191176	.	-	0	ID=cds2890;Parent=gene2937;Dbxref=Genbank:WP_002209758.1;Name=WP_002209758.1;gbkey=CDS;product=beta-glucosidase;protein_id=WP_002209758.1;transl_table=11
NC_017154.1	RefSeq	gene	3191335	3191865	.	-	.	ID=gene2938;Name=YPD4_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14735;old_locus_tag=YPD4_2496
NC_017154.1	Protein Homology	CDS	3191335	3191865	.	-	0	ID=cds2891;Parent=gene2938;Dbxref=Genbank:WP_002209757.1;Name=WP_002209757.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209757.1;transl_table=11
NC_017154.1	RefSeq	gene	3191858	3194065	.	-	.	ID=gene2939;Name=YPD4_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14740;old_locus_tag=YPD4_2497
NC_017154.1	Protein Homology	CDS	3191858	3194065	.	-	0	ID=cds2892;Parent=gene2939;Dbxref=Genbank:WP_002209756.1;Name=WP_002209756.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209756.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3194445	3195763	.	+	.	ID=id240;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3194517	3195725	.	+	.	ID=gene2940;Name=YPD4_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14745;old_locus_tag=YPD4_2498
NC_017154.1	Protein Homology	CDS	3194517	3195725	.	+	0	ID=cds2893;Parent=gene2940;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	3195804	3196112	.	+	.	ID=gene2941;Name=YPD4_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14750;old_locus_tag=YPD4_2499
NC_017154.1	Protein Homology	CDS	3195804	3196112	.	+	0	ID=cds2894;Parent=gene2941;Dbxref=Genbank:WP_002209754.1;Name=WP_002209754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209754.1;transl_table=11
NC_017154.1	RefSeq	gene	3196127	3196708	.	-	.	ID=gene2942;Name=YPD4_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14755;old_locus_tag=YPD4_2500
NC_017154.1	Protein Homology	CDS	3196127	3196708	.	-	0	ID=cds2895;Parent=gene2942;Dbxref=Genbank:WP_002209753.1;Name=WP_002209753.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209753.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3197046	3197219	.	+	.	ID=id241;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3197243	3199159	.	-	.	ID=gene2943;Name=YPD4_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14760;old_locus_tag=YPD4_2501
NC_017154.1	Protein Homology	CDS	3197243	3199159	.	-	0	ID=cds2896;Parent=gene2943;Dbxref=Genbank:WP_002209752.1;Name=WP_002209752.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209752.1;transl_table=11
NC_017154.1	RefSeq	gene	3199968	3200207	.	+	.	ID=gene2944;Name=YPD4_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14765
NC_017154.1	Protein Homology	CDS	3199968	3200207	.	+	0	ID=cds2897;Parent=gene2944;Dbxref=Genbank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11
NC_017154.1	RefSeq	gene	3200246	3200497	.	+	.	ID=gene2945;Name=YPD4_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14770
NC_017154.1	Protein Homology	CDS	3200246	3200497	.	+	0	ID=cds2898;Parent=gene2945;Dbxref=Genbank:WP_002227852.1;Name=WP_002227852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227852.1;transl_table=11
NC_017154.1	RefSeq	gene	3200521	3201093	.	+	.	ID=gene2946;Name=YPD4_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14775;old_locus_tag=YPD4_2502
NC_017154.1	Protein Homology	CDS	3200521	3201093	.	+	0	ID=cds2899;Parent=gene2946;Dbxref=Genbank:WP_002209749.1;Name=WP_002209749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209749.1;transl_table=11
NC_017154.1	RefSeq	gene	3201105	3201506	.	-	.	ID=gene2947;Name=YPD4_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14780;old_locus_tag=YPD4_2503
NC_017154.1	Protein Homology	CDS	3201105	3201506	.	-	0	ID=cds2900;Parent=gene2947;Dbxref=Genbank:WP_002209748.1;Name=WP_002209748.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209748.1;transl_table=11
NC_017154.1	RefSeq	gene	3201739	3202140	.	-	.	ID=gene2948;Name=YPD4_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14785;old_locus_tag=YPD4_2504
NC_017154.1	Protein Homology	CDS	3201739	3202140	.	-	0	ID=cds2901;Parent=gene2948;Dbxref=Genbank:WP_002209746.1;Name=WP_002209746.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209746.1;transl_table=11
NC_017154.1	RefSeq	gene	3202133	3202336	.	-	.	ID=gene2949;Name=YPD4_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14790
NC_017154.1	Protein Homology	CDS	3202133	3202336	.	-	0	ID=cds2902;Parent=gene2949;Dbxref=Genbank:WP_002216003.1;Name=WP_002216003.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216003.1;transl_table=11
NC_017154.1	RefSeq	gene	3202408	3202989	.	-	.	ID=gene2950;Name=YPD4_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14795;old_locus_tag=YPD4_2505
NC_017154.1	Protein Homology	CDS	3202408	3202989	.	-	0	ID=cds2903;Parent=gene2950;Dbxref=Genbank:WP_002216002.1;Name=WP_002216002.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216002.1;transl_table=11
NC_017154.1	RefSeq	gene	3203662	3203907	.	+	.	ID=gene2951;Name=YPD4_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14800
NC_017154.1	Protein Homology	CDS	3203662	3203907	.	+	0	ID=cds2904;Parent=gene2951;Dbxref=Genbank:WP_002209745.1;Name=WP_002209745.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002209745.1;transl_table=11
NC_017154.1	RefSeq	gene	3204120	3205529	.	-	.	ID=gene2952;Name=YPD4_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14805;old_locus_tag=YPD4_2506
NC_017154.1	Protein Homology	CDS	3204120	3205529	.	-	0	ID=cds2905;Parent=gene2952;Dbxref=Genbank:WP_002209744.1;Name=WP_002209744.1;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=WP_002209744.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3205649	3206967	.	+	.	ID=id242;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3205686	3206894	.	-	.	ID=gene2953;Name=YPD4_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14810;old_locus_tag=YPD4_2507
NC_017154.1	Protein Homology	CDS	3205686	3206894	.	-	0	ID=cds2906;Parent=gene2953;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	3207034	3208290	.	+	.	ID=gene2954;Name=YPD4_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14815;old_locus_tag=YPD4_2508
NC_017154.1	Protein Homology	CDS	3207034	3208290	.	+	0	ID=cds2907;Parent=gene2954;Dbxref=Genbank:WP_002222248.1;Name=WP_002222248.1;gbkey=CDS;product=PTS beta-glucoside transporter subunit IIBC;protein_id=WP_002222248.1;transl_table=11
NC_017154.1	RefSeq	gene	3208407	3208955	.	-	.	ID=gene2955;Name=YPD4_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14820;old_locus_tag=YPD4_2509
NC_017154.1	Protein Homology	CDS	3208407	3208955	.	-	0	ID=cds2908;Parent=gene2955;Dbxref=Genbank:WP_002209742.1;Name=WP_002209742.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002209742.1;transl_table=11
NC_017154.1	RefSeq	gene	3209177	3209764	.	-	.	ID=gene2956;Name=YPD4_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14825;old_locus_tag=YPD4_2510
NC_017154.1	Protein Homology	CDS	3209177	3209764	.	-	0	ID=cds2909;Parent=gene2956;Dbxref=Genbank:WP_002225358.1;Name=WP_002225358.1;gbkey=CDS;product=phosphodiesterase;protein_id=WP_002225358.1;transl_table=11
NC_017154.1	RefSeq	gene	3209952	3210644	.	-	.	ID=gene2957;Name=YPD4_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14830;old_locus_tag=YPD4_2511
NC_017154.1	Protein Homology	CDS	3209952	3210644	.	-	0	ID=cds2910;Parent=gene2957;Dbxref=Genbank:WP_002209740.1;Name=WP_002209740.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_002209740.1;transl_table=11
NC_017154.1	RefSeq	gene	3210998	3211906	.	+	.	ID=gene2958;Name=YPD4_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14835;old_locus_tag=YPD4_2512
NC_017154.1	Protein Homology	CDS	3210998	3211906	.	+	0	ID=cds2911;Parent=gene2958;Dbxref=Genbank:WP_002209739.1;Name=WP_002209739.1;gbkey=CDS;product=epimerase;protein_id=WP_002209739.1;transl_table=11
NC_017154.1	RefSeq	gene	3212030	3212827	.	-	.	ID=gene2959;Name=YPD4_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14840;old_locus_tag=YPD4_2513
NC_017154.1	Protein Homology	CDS	3212030	3212827	.	-	0	ID=cds2912;Parent=gene2959;Dbxref=Genbank:WP_002209738.1;Name=WP_002209738.1;gbkey=CDS;product=histidine ABC transporter ATP-binding protein;protein_id=WP_002209738.1;transl_table=11
NC_017154.1	RefSeq	gene	3212841	3213557	.	-	.	ID=gene2960;Name=YPD4_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14845;old_locus_tag=YPD4_2514
NC_017154.1	Protein Homology	CDS	3212841	3213557	.	-	0	ID=cds2913;Parent=gene2960;Dbxref=Genbank:WP_002209737.1;Name=WP_002209737.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisM;protein_id=WP_002209737.1;transl_table=11
NC_017154.1	RefSeq	gene	3213554	3214240	.	-	.	ID=gene2961;Name=YPD4_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14850;old_locus_tag=YPD4_2515
NC_017154.1	Protein Homology	CDS	3213554	3214240	.	-	0	ID=cds2914;Parent=gene2961;Dbxref=Genbank:WP_002209736.1;Name=WP_002209736.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisQ;protein_id=WP_002209736.1;transl_table=11
NC_017154.1	RefSeq	gene	3214343	3215125	.	-	.	ID=gene2962;Name=YPD4_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14855;old_locus_tag=YPD4_2516
NC_017154.1	Protein Homology	CDS	3214343	3215125	.	-	0	ID=cds2915;Parent=gene2962;Dbxref=Genbank:WP_002216029.1;Name=WP_002216029.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002216029.1;transl_table=11
NC_017154.1	RefSeq	gene	3215650	3216222	.	-	.	ID=gene2963;Name=YPD4_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14860;old_locus_tag=YPD4_2517
NC_017154.1	Protein Homology	CDS	3215650	3216222	.	-	0	ID=cds2916;Parent=gene2963;Dbxref=Genbank:WP_002209734.1;Name=WP_002209734.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002209734.1;transl_table=11
NC_017154.1	RefSeq	gene	3216469	3217986	.	-	.	ID=gene2964;Name=YPD4_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14865;old_locus_tag=YPD4_2518
NC_017154.1	Protein Homology	CDS	3216469	3217986	.	-	0	ID=cds2917;Parent=gene2964;Dbxref=Genbank:WP_002209733.1;Name=WP_002209733.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11
NC_017154.1	RefSeq	gene	3217999	3218508	.	-	.	ID=gene2965;Name=YPD4_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14870;old_locus_tag=YPD4_2519
NC_017154.1	Protein Homology	CDS	3217999	3218508	.	-	0	ID=cds2918;Parent=gene2965;Dbxref=Genbank:WP_002209732.1;Name=WP_002209732.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11
NC_017154.1	RefSeq	gene	3218820	3219542	.	-	.	ID=gene2966;Name=YPD4_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14875;old_locus_tag=YPD4_2520
NC_017154.1	Protein Homology	CDS	3218820	3219542	.	-	0	ID=cds2919;Parent=gene2966;Dbxref=Genbank:WP_002209731.1;Name=WP_002209731.1;gbkey=CDS;product=cell division protein DedD;protein_id=WP_002209731.1;transl_table=11
NC_017154.1	RefSeq	gene	3219662	3220966	.	-	.	ID=gene2967;Name=YPD4_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14880;old_locus_tag=YPD4_2521
NC_017154.1	Protein Homology	CDS	3219662	3220966	.	-	0	ID=cds2920;Parent=gene2967;Dbxref=Genbank:WP_002209730.1;Name=WP_002209730.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_002209730.1;transl_table=11
NC_017154.1	RefSeq	gene	3221215	3222129	.	-	.	ID=gene2968;Name=YPD4_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14885;old_locus_tag=YPD4_2522
NC_017154.1	Protein Homology	CDS	3221215	3222129	.	-	0	ID=cds2921;Parent=gene2968;Dbxref=Genbank:WP_002209729.1;Name=WP_002209729.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_002209729.1;transl_table=11
NC_017154.1	RefSeq	gene	3222360	3223022	.	-	.	ID=gene2969;Name=YPD4_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14890;old_locus_tag=YPD4_2523
NC_017154.1	Protein Homology	CDS	3222360	3223022	.	-	0	ID=cds2922;Parent=gene2969;Dbxref=Genbank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209728.1;transl_table=11
NC_017154.1	RefSeq	gene	3223179	3224009	.	-	.	ID=gene2970;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=YPD4_RS14895;old_locus_tag=YPD4_2524
NC_017154.1	Protein Homology	CDS	3223179	3224009	.	-	0	ID=cds2923;Parent=gene2970;Dbxref=Genbank:WP_032465663.1;Name=WP_032465663.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_032465663.1;transl_table=11
NC_017154.1	RefSeq	gene	3224060	3225070	.	-	.	ID=gene2971;Name=YPD4_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14900;old_locus_tag=YPD4_2525
NC_017154.1	Protein Homology	CDS	3224060	3225070	.	-	0	ID=cds2924;Parent=gene2971;Dbxref=Genbank:WP_002209726.1;Name=WP_002209726.1;gbkey=CDS;product=semialdehyde dehydrogenase;protein_id=WP_002209726.1;transl_table=11
NC_017154.1	RefSeq	gene	3225240	3226367	.	-	.	ID=gene2972;Name=YPD4_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14905;old_locus_tag=YPD4_2526
NC_017154.1	Protein Homology	CDS	3225240	3226367	.	-	0	ID=cds2925;Parent=gene2972;Dbxref=Genbank:WP_002209725.1;Name=WP_002209725.1;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_002209725.1;transl_table=11
NC_017154.1	RefSeq	gene	3226414	3227199	.	-	.	ID=gene2973;Name=YPD4_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14910;old_locus_tag=YPD4_2527
NC_017154.1	Protein Homology	CDS	3226414	3227199	.	-	0	ID=cds2926;Parent=gene2973;Dbxref=Genbank:WP_002209724.1;Name=WP_002209724.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209724.1;transl_table=11
NC_017154.1	RefSeq	gene	3227186	3227347	.	-	.	ID=gene2974;Name=YPD4_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14915
NC_017154.1	Protein Homology	CDS	3227186	3227347	.	-	0	ID=cds2927;Parent=gene2974;Dbxref=Genbank:WP_002209723.1;Name=WP_002209723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209723.1;transl_table=11
NC_017154.1	RefSeq	gene	3227425	3228342	.	+	.	ID=gene2975;Name=YPD4_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14920;old_locus_tag=YPD4_2528
NC_017154.1	Protein Homology	CDS	3227425	3228342	.	+	0	ID=cds2928;Parent=gene2975;Dbxref=Genbank:WP_002209722.1;Name=WP_002209722.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002209722.1;transl_table=11
NC_017154.1	RefSeq	gene	3228627	3229664	.	+	.	ID=gene2976;Name=YPD4_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14925;old_locus_tag=YPD4_2529
NC_017154.1	Protein Homology	CDS	3228627	3229664	.	+	0	ID=cds2929;Parent=gene2976;Dbxref=Genbank:WP_002209721.1;Name=WP_002209721.1;gbkey=CDS;product=flagella biosynthesis regulator;protein_id=WP_002209721.1;transl_table=11
NC_017154.1	RefSeq	gene	3230006	3230536	.	-	.	ID=gene2977;Name=YPD4_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14930;old_locus_tag=YPD4_2530
NC_017154.1	Protein Homology	CDS	3230006	3230536	.	-	0	ID=cds2930;Parent=gene2977;Dbxref=Genbank:WP_002209720.1;Name=WP_002209720.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_002209720.1;transl_table=11
NC_017154.1	RefSeq	gene	3231327	3232019	.	+	.	ID=gene2978;Name=YPD4_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14935;old_locus_tag=YPD4_2531
NC_017154.1	Protein Homology	CDS	3231327	3232019	.	+	0	ID=cds2931;Parent=gene2978;Dbxref=Genbank:WP_002209718.1;Name=WP_002209718.1;gbkey=CDS;product=racemase;protein_id=WP_002209718.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3232191	3232362	.	+	.	ID=id243;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3232427	3233651	.	-	.	ID=gene2979;Name=YPD4_RS14940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS14940;pseudo=true
NC_017154.1	Protein Homology	CDS	3232427	3233651	.	-	0	ID=cds2932;Parent=gene2979;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;exception=annotated by transcript or proteomic data;gbkey=CDS;product=3-oxoacyl-ACP synthase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3233823	3235892	.	+	.	ID=gene2980;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=YPD4_RS14945;old_locus_tag=YPD4_2534
NC_017154.1	Protein Homology	CDS	3233823	3235892	.	+	0	ID=cds2933;Parent=gene2980;Dbxref=Genbank:WP_002209716.1;Name=WP_002209716.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;product=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;protein_id=WP_002209716.1;transl_table=11
NC_017154.1	RefSeq	gene	3236070	3236348	.	-	.	ID=gene2981;Name=YPD4_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14950
NC_017154.1	Protein Homology	CDS	3236070	3236348	.	-	0	ID=cds2934;Parent=gene2981;Dbxref=Genbank:WP_002209715.1;Name=WP_002209715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209715.1;transl_table=11
NC_017154.1	RefSeq	gene	3236406	3236948	.	-	.	ID=gene2982;Name=YPD4_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14955;old_locus_tag=YPD4_2535
NC_017154.1	Protein Homology	CDS	3236406	3236948	.	-	0	ID=cds2935;Parent=gene2982;Dbxref=Genbank:WP_002209714.1;Name=WP_002209714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209714.1;transl_table=11
NC_017154.1	RefSeq	gene	3237048	3237854	.	-	.	ID=gene2983;Name=YPD4_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14960;old_locus_tag=YPD4_2536
NC_017154.1	Protein Homology	CDS	3237048	3237854	.	-	0	ID=cds2936;Parent=gene2983;Dbxref=Genbank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209713.1;transl_table=11
NC_017154.1	RefSeq	gene	3237858	3238685	.	-	.	ID=gene2984;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=YPD4_RS14965;old_locus_tag=YPD4_2537
NC_017154.1	Protein Homology	CDS	3237858	3238685	.	-	0	ID=cds2937;Parent=gene2984;Dbxref=Genbank:WP_002225365.1;Name=WP_002225365.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=WP_002225365.1;transl_table=11
NC_017154.1	RefSeq	gene	3238691	3239776	.	-	.	ID=gene2985;Name=YPD4_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14970;old_locus_tag=YPD4_2538
NC_017154.1	Protein Homology	CDS	3238691	3239776	.	-	0	ID=cds2938;Parent=gene2985;Dbxref=Genbank:WP_002209711.1;Name=WP_002209711.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_002209711.1;transl_table=11
NC_017154.1	RefSeq	gene	3239853	3240785	.	-	.	ID=gene2986;Name=YPD4_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14975;old_locus_tag=YPD4_2539
NC_017154.1	Protein Homology	CDS	3239853	3240785	.	-	0	ID=cds2939;Parent=gene2986;Dbxref=Genbank:WP_002209710.1;Name=WP_002209710.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=50S ribosomal protein L3 glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11
NC_017154.1	RefSeq	gene	3241155	3241685	.	+	.	ID=gene2987;Name=YPD4_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14980;old_locus_tag=YPD4_2540
NC_017154.1	Protein Homology	CDS	3241155	3241685	.	+	0	ID=cds2940;Parent=gene2987;Dbxref=Genbank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;product=peptidase S10;protein_id=WP_002227846.1;transl_table=11
NC_017154.1	RefSeq	gene	3242087	3242578	.	-	.	ID=gene2988;Name=YPD4_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14985;old_locus_tag=YPD4_2541
NC_017154.1	Protein Homology	CDS	3242087	3242578	.	-	0	ID=cds2941;Parent=gene2988;Dbxref=Genbank:WP_002209707.1;Name=WP_002209707.1;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=WP_002209707.1;transl_table=11
NC_017154.1	RefSeq	gene	3243148	3245472	.	-	.	ID=gene2989;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=YPD4_RS14990;old_locus_tag=YPD4_2542
NC_017154.1	Protein Homology	CDS	3243148	3245472	.	-	0	ID=cds2942;Parent=gene2989;Dbxref=Genbank:WP_002209705.1;Name=WP_002209705.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=fatty acid oxidation complex subunit alpha;protein_id=WP_002209705.1;transl_table=11
NC_017154.1	RefSeq	gene	3245472	3246782	.	-	.	ID=gene2990;Name=YPD4_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS14995;old_locus_tag=YPD4_2543
NC_017154.1	Protein Homology	CDS	3245472	3246782	.	-	0	ID=cds2943;Parent=gene2990;Dbxref=Genbank:WP_002209704.1;Name=WP_002209704.1;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=WP_002209704.1;transl_table=11
NC_017154.1	RefSeq	gene	3247069	3247353	.	-	.	ID=gene2991;Name=YPD4_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15000
NC_017154.1	Protein Homology	CDS	3247069	3247353	.	-	0	ID=cds2944;Parent=gene2991;Dbxref=Genbank:WP_025470754.1;Name=WP_025470754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025470754.1;transl_table=11
NC_017154.1	RefSeq	gene	3247779	3249044	.	+	.	ID=gene2992;Name=YPD4_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15005;old_locus_tag=YPD4_2544
NC_017154.1	Protein Homology	CDS	3247779	3249044	.	+	0	ID=cds2945;Parent=gene2992;Dbxref=Genbank:WP_002209702.1;Name=WP_002209702.1;gbkey=CDS;product=long-chain fatty acid outer membrane transporter;protein_id=WP_002209702.1;transl_table=11
NC_017154.1	RefSeq	gene	3249150	3249914	.	-	.	ID=gene2993;Name=YPD4_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15010;old_locus_tag=YPD4_2545
NC_017154.1	Protein Homology	CDS	3249150	3249914	.	-	0	ID=cds2946;Parent=gene2993;Dbxref=Genbank:WP_002209701.1;Name=WP_002209701.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=membrane protein;protein_id=WP_002209701.1;transl_table=11
NC_017154.1	RefSeq	gene	3249950	3251176	.	-	.	ID=gene2994;Name=YPD4_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15015;old_locus_tag=YPD4_2546
NC_017154.1	Protein Homology	CDS	3249950	3251176	.	-	0	ID=cds2947;Parent=gene2994;Dbxref=Genbank:WP_002209700.1;Name=WP_002209700.1;gbkey=CDS;product=cytochrome C;protein_id=WP_002209700.1;transl_table=11
NC_017154.1	RefSeq	gene	3251176	3251688	.	-	.	ID=gene2995;Name=YPD4_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15020;old_locus_tag=YPD4_2547
NC_017154.1	Protein Homology	CDS	3251176	3251688	.	-	0	ID=cds2948;Parent=gene2995;Dbxref=Genbank:WP_002214855.1;Name=WP_002214855.1;gbkey=CDS;product=cytochrome C biogenesis protein;protein_id=WP_002214855.1;transl_table=11
NC_017154.1	RefSeq	gene	3251685	3252251	.	-	.	ID=gene2996;Name=YPD4_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15025;old_locus_tag=YPD4_2548
NC_017154.1	Protein Homology	CDS	3251685	3252251	.	-	0	ID=cds2949;Parent=gene2996;Dbxref=Genbank:WP_002209699.1;Name=WP_002209699.1;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;gbkey=CDS;product=thiol:disulfide interchange protein DsbE;protein_id=WP_002209699.1;transl_table=11
NC_017154.1	RefSeq	gene	3252248	3254218	.	-	.	ID=gene2997;Name=YPD4_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15030;old_locus_tag=YPD4_2549
NC_017154.1	Protein Homology	CDS	3252248	3254218	.	-	0	ID=cds2950;Parent=gene2997;Dbxref=Genbank:WP_002209698.1;Name=WP_002209698.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;product=heme lyase subunit CcmF;protein_id=WP_002209698.1;transl_table=11
NC_017154.1	RefSeq	gene	3254215	3254709	.	-	.	ID=gene2998;Name=YPD4_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15035;old_locus_tag=YPD4_2550
NC_017154.1	Protein Homology	CDS	3254215	3254709	.	-	0	ID=cds2951;Parent=gene2998;Dbxref=Genbank:WP_002209697.1;Name=WP_002209697.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=WP_002209697.1;transl_table=11
NC_017154.1	RefSeq	gene	3254706	3255008	.	-	.	ID=gene2999;Name=YPD4_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15040;old_locus_tag=YPD4_2551
NC_017154.1	Protein Homology	CDS	3254706	3255008	.	-	0	ID=cds2952;Parent=gene2999;Dbxref=Genbank:WP_002209696.1;Name=WP_002209696.1;gbkey=CDS;product=heme exporter protein D;protein_id=WP_002209696.1;transl_table=11
NC_017154.1	RefSeq	gene	3255005	3255742	.	-	.	ID=gene3000;Name=YPD4_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15045;old_locus_tag=YPD4_2552
NC_017154.1	Protein Homology	CDS	3255005	3255742	.	-	0	ID=cds2953;Parent=gene3000;Dbxref=Genbank:WP_002209695.1;Name=WP_002209695.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme exporter protein C;protein_id=WP_002209695.1;transl_table=11
NC_017154.1	RefSeq	gene	3255805	3256464	.	-	.	ID=gene3001;Name=YPD4_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15050;old_locus_tag=YPD4_2553
NC_017154.1	Protein Homology	CDS	3255805	3256464	.	-	0	ID=cds2954;Parent=gene3001;Dbxref=Genbank:WP_002209694.1;Name=WP_002209694.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;product=heme exporter protein B;protein_id=WP_002209694.1;transl_table=11
NC_017154.1	RefSeq	gene	3256434	3257090	.	-	.	ID=gene3002;Name=YPD4_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15055;old_locus_tag=YPD4_2554
NC_017154.1	Protein Homology	CDS	3256434	3257090	.	-	0	ID=cds2955;Parent=gene3002;Dbxref=Genbank:WP_002209693.1;Name=WP_002209693.1;gbkey=CDS;product=cytochrome c biogenesis ATP-binding export protein CcmA;protein_id=WP_002209693.1;transl_table=11
NC_017154.1	RefSeq	gene	3257535	3258002	.	-	.	ID=gene3003;Name=YPD4_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15060;old_locus_tag=YPD4_2555
NC_017154.1	Protein Homology	CDS	3257535	3258002	.	-	0	ID=cds2956;Parent=gene3003;Dbxref=Genbank:WP_002209692.1;Name=WP_002209692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209692.1;transl_table=11
NC_017154.1	RefSeq	gene	3258257	3258331	.	-	.	ID=gene3004;Name=YPD4_RS15065;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS15065;old_locus_tag=YPD4_t39
NC_017154.1	tRNAscan-SE	tRNA	3258257	3258331	.	-	.	ID=rna44;Parent=gene3004;anticodon=(pos:complement(3258296..3258298));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	tRNAscan-SE	exon	3258257	3258331	.	-	.	ID=id244;Parent=rna44;anticodon=(pos:complement(3258296..3258298));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	RefSeq	gene	3258618	3259160	.	+	.	ID=gene3005;Name=YPD4_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15070;old_locus_tag=YPD4_2556
NC_017154.1	Protein Homology	CDS	3258618	3259160	.	+	0	ID=cds2957;Parent=gene3005;Dbxref=Genbank:WP_002209691.1;Name=WP_002209691.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209691.1;transl_table=11
NC_017154.1	RefSeq	gene	3259165	3261204	.	+	.	ID=gene3006;Name=YPD4_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15075;old_locus_tag=YPD4_2557
NC_017154.1	Protein Homology	CDS	3259165	3261204	.	+	0	ID=cds2958;Parent=gene3006;Dbxref=Genbank:WP_002209690.1;Name=WP_002209690.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209690.1;transl_table=11
NC_017154.1	RefSeq	gene	3261580	3261921	.	+	.	ID=gene3007;Name=YPD4_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15080;old_locus_tag=YPD4_2558
NC_017154.1	Protein Homology	CDS	3261580	3261921	.	+	0	ID=cds2959;Parent=gene3007;Dbxref=Genbank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209688.1;transl_table=11
NC_017154.1	RefSeq	gene	3261996	3262343	.	-	.	ID=gene3008;Name=YPD4_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15085;old_locus_tag=YPD4_2559
NC_017154.1	Protein Homology	CDS	3261996	3262343	.	-	0	ID=cds2960;Parent=gene3008;Dbxref=Genbank:WP_002209687.1;Name=WP_002209687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209687.1;transl_table=11
NC_017154.1	RefSeq	gene	3262368	3262847	.	-	.	ID=gene3009;Name=YPD4_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15090;old_locus_tag=YPD4_2560
NC_017154.1	Protein Homology	CDS	3262368	3262847	.	-	0	ID=cds2961;Parent=gene3009;Dbxref=Genbank:WP_002209686.1;Name=WP_002209686.1;gbkey=CDS;product=lysozyme;protein_id=WP_002209686.1;transl_table=11
NC_017154.1	RefSeq	gene	3262944	3263750	.	-	.	ID=gene3010;Name=YPD4_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15095;old_locus_tag=YPD4_2561
NC_017154.1	Protein Homology	CDS	3262944	3263750	.	-	0	ID=cds2962;Parent=gene3010;Dbxref=Genbank:WP_002209685.1;Name=WP_002209685.1;gbkey=CDS;product=ImpE family protein;protein_id=WP_002209685.1;transl_table=11
NC_017154.1	RefSeq	gene	3263770	3264612	.	-	.	ID=gene3011;Name=YPD4_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15100;old_locus_tag=YPD4_2562
NC_017154.1	Protein Homology	CDS	3263770	3264612	.	-	0	ID=cds2963;Parent=gene3011;Dbxref=Genbank:WP_002354537.1;Name=WP_002354537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354537.1;transl_table=11
NC_017154.1	RefSeq	gene	3264618	3264878	.	-	.	ID=gene3012;Name=YPD4_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15105
NC_017154.1	Protein Homology	CDS	3264618	3264878	.	-	0	ID=cds2964;Parent=gene3012;Dbxref=Genbank:WP_002209684.1;Name=WP_002209684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209684.1;transl_table=11
NC_017154.1	RefSeq	gene	3264977	3267576	.	-	.	ID=gene3013;Name=YPD4_RS15110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS15110;old_locus_tag=YPD4_2563;pseudo=true
NC_017154.1	Protein Homology	CDS	3264977	3267576	.	-	0	ID=cds2965;Parent=gene3013;exception=annotated by transcript or proteomic data;gbkey=CDS;product=type IV secretion protein Rhs;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	3265022	3265211	.	+	.	ID=id245;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3267870	3271697	.	-	.	ID=gene3014;Name=YPD4_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15115;old_locus_tag=YPD4_2564
NC_017154.1	Protein Homology	CDS	3267870	3271697	.	-	0	ID=cds2966;Parent=gene3014;Dbxref=Genbank:WP_002214843.1;Name=WP_002214843.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_002214843.1;transl_table=11
NC_017154.1	RefSeq	gene	3271706	3272542	.	-	.	ID=gene3015;Name=YPD4_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15120
NC_017154.1	Protein Homology	CDS	3271706	3272542	.	-	0	ID=cds2967;Parent=gene3015;Dbxref=Genbank:WP_002209681.1;Name=WP_002209681.1;gbkey=CDS;product=polymerase;protein_id=WP_002209681.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3272483	3274449	.	+	.	ID=id246;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3272558	3273337	.	-	.	ID=gene3016;Name=YPD4_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15125;old_locus_tag=YPD4_2566
NC_017154.1	Protein Homology	CDS	3272558	3273337	.	-	0	ID=cds2968;Parent=gene3016;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	3273337	3274359	.	-	.	ID=gene3017;Name=YPD4_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15130;old_locus_tag=YPD4_2567
NC_017154.1	Protein Homology	CDS	3273337	3274359	.	-	0	ID=cds2969;Parent=gene3017;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	3274373	3275041	.	-	.	ID=gene3018;Name=YPD4_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15135;old_locus_tag=YPD4_2568
NC_017154.1	Protein Homology	CDS	3274373	3275041	.	-	0	ID=cds2970;Parent=gene3018;Dbxref=Genbank:WP_002215165.1;Name=WP_002215165.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215165.1;transl_table=11
NC_017154.1	RefSeq	gene	3275038	3276387	.	-	.	ID=gene3019;Name=YPD4_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15140;old_locus_tag=YPD4_2569
NC_017154.1	Protein Homology	CDS	3275038	3276387	.	-	0	ID=cds2971;Parent=gene3019;Dbxref=Genbank:WP_002211571.1;Name=WP_002211571.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211571.1;transl_table=11
NC_017154.1	RefSeq	gene	3276391	3276930	.	-	.	ID=gene3020;Name=YPD4_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15145;old_locus_tag=YPD4_2570
NC_017154.1	Protein Homology	CDS	3276391	3276930	.	-	0	ID=cds2972;Parent=gene3020;Dbxref=Genbank:WP_002211572.1;Name=WP_002211572.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211572.1;transl_table=11
NC_017154.1	RefSeq	gene	3277204	3277689	.	-	.	ID=gene3021;Name=YPD4_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15150;old_locus_tag=YPD4_2571
NC_017154.1	Protein Homology	CDS	3277204	3277689	.	-	0	ID=cds2973;Parent=gene3021;Dbxref=Genbank:WP_002211573.1;Name=WP_002211573.1;gbkey=CDS;product=type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11
NC_017154.1	RefSeq	gene	3278015	3279517	.	-	.	ID=gene3022;Name=YPD4_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15155;old_locus_tag=YPD4_2572
NC_017154.1	Protein Homology	CDS	3278015	3279517	.	-	0	ID=cds2974;Parent=gene3022;Dbxref=Genbank:WP_002211574.1;Name=WP_002211574.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002211574.1;transl_table=11
NC_017154.1	RefSeq	gene	3279541	3280065	.	-	.	ID=gene3023;Name=YPD4_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15160;old_locus_tag=YPD4_2573
NC_017154.1	Protein Homology	CDS	3279541	3280065	.	-	0	ID=cds2975;Parent=gene3023;Dbxref=Genbank:WP_002211575.1;Name=WP_002211575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211575.1;transl_table=11
NC_017154.1	RefSeq	gene	3280170	3280778	.	-	.	ID=gene3024;Name=YPD4_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15165;old_locus_tag=YPD4_2574
NC_017154.1	Protein Homology	CDS	3280170	3280778	.	-	0	ID=cds2976;Parent=gene3024;Dbxref=Genbank:WP_002211576.1;Name=WP_002211576.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211576.1;transl_table=11
NC_017154.1	RefSeq	gene	3280763	3281953	.	-	.	ID=gene3025;Name=YPD4_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15170;old_locus_tag=YPD4_2575
NC_017154.1	Protein Homology	CDS	3280763	3281953	.	-	0	ID=cds2977;Parent=gene3025;Dbxref=Genbank:WP_002211577.1;Name=WP_002211577.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002211577.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3281905	3283225	.	+	.	ID=id247;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3281978	3283186	.	+	.	ID=gene3026;Name=YPD4_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15175;old_locus_tag=YPD4_2576
NC_017154.1	Protein Homology	CDS	3281978	3283186	.	+	0	ID=cds2978;Parent=gene3026;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	3283208	3284758	.	-	.	ID=gene3027;Name=YPD4_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15180;old_locus_tag=YPD4_2577
NC_017154.1	Protein Homology	CDS	3283208	3284758	.	-	0	ID=cds2979;Parent=gene3027;Dbxref=Genbank:WP_002215157.1;Name=WP_002215157.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002215157.1;transl_table=11
NC_017154.1	RefSeq	gene	3284886	3285647	.	-	.	ID=gene3028;Name=YPD4_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15185;old_locus_tag=YPD4_2578
NC_017154.1	Protein Homology	CDS	3284886	3285647	.	-	0	ID=cds2980;Parent=gene3028;Dbxref=Genbank:WP_002211579.1;Name=WP_002211579.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211579.1;transl_table=11
NC_017154.1	RefSeq	gene	3285804	3286349	.	-	.	ID=gene3029;Name=YPD4_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15190;old_locus_tag=YPD4_2579
NC_017154.1	Protein Homology	CDS	3285804	3286349	.	-	0	ID=cds2981;Parent=gene3029;Dbxref=Genbank:WP_002211580.1;Name=WP_002211580.1;gbkey=CDS;product=frimbrial protein;protein_id=WP_002211580.1;transl_table=11
NC_017154.1	RefSeq	gene	3286550	3289225	.	-	.	ID=gene3030;Name=YPD4_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15195;old_locus_tag=YPD4_2580
NC_017154.1	Protein Homology	CDS	3286550	3289225	.	-	0	ID=cds2982;Parent=gene3030;Dbxref=Genbank:WP_002215317.1;Name=WP_002215317.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_002215317.1;transl_table=11
NC_017154.1	RefSeq	gene	3290008	3291888	.	+	.	ID=gene3031;Name=YPD4_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15200;old_locus_tag=YPD4_2581
NC_017154.1	Protein Homology	CDS	3290008	3291888	.	+	0	ID=cds2983;Parent=gene3031;Dbxref=Genbank:WP_002211582.1;Name=WP_002211582.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211582.1;transl_table=11
NC_017154.1	RefSeq	gene	3291888	3292913	.	+	.	ID=gene3032;Name=YPD4_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15205;old_locus_tag=YPD4_2582
NC_017154.1	Protein Homology	CDS	3291888	3292913	.	+	0	ID=cds2984;Parent=gene3032;Dbxref=Genbank:WP_002211583.1;Name=WP_002211583.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211583.1;transl_table=11
NC_017154.1	RefSeq	gene	3293012	3294193	.	+	.	ID=gene3033;Name=YPD4_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15210;old_locus_tag=YPD4_2583
NC_017154.1	Protein Homology	CDS	3293012	3294193	.	+	0	ID=cds2985;Parent=gene3033;Dbxref=Genbank:WP_002211584.1;Name=WP_002211584.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211584.1;transl_table=11
NC_017154.1	RefSeq	gene	3294200	3295231	.	+	.	ID=gene3034;Name=YPD4_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15215;old_locus_tag=YPD4_2584
NC_017154.1	Protein Homology	CDS	3294200	3295231	.	+	0	ID=cds2986;Parent=gene3034;Dbxref=Genbank:WP_002215319.1;Name=WP_002215319.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215319.1;transl_table=11
NC_017154.1	RefSeq	gene	3295271	3296608	.	+	.	ID=gene3035;Name=YPD4_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15220;old_locus_tag=YPD4_2585
NC_017154.1	Protein Homology	CDS	3295271	3296608	.	+	0	ID=cds2987;Parent=gene3035;Dbxref=Genbank:WP_002211586.1;Name=WP_002211586.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_002211586.1;transl_table=11
NC_017154.1	RefSeq	gene	3296605	3297288	.	+	.	ID=gene3036;Name=YPD4_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15225;old_locus_tag=YPD4_2586
NC_017154.1	Protein Homology	CDS	3296605	3297288	.	+	0	ID=cds2988;Parent=gene3036;Dbxref=Genbank:WP_002211587.1;Name=WP_002211587.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211587.1;transl_table=11
NC_017154.1	RefSeq	gene	3297289	3298971	.	+	.	ID=gene3037;Name=YPD4_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15230;old_locus_tag=YPD4_2587
NC_017154.1	Protein Homology	CDS	3297289	3298971	.	+	0	ID=cds2989;Parent=gene3037;Dbxref=Genbank:WP_002211588.1;Name=WP_002211588.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211588.1;transl_table=11
NC_017154.1	RefSeq	gene	3298968	3299450	.	+	.	ID=gene3038;Name=YPD4_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15235;old_locus_tag=YPD4_2588
NC_017154.1	Protein Homology	CDS	3298968	3299450	.	+	0	ID=cds2990;Parent=gene3038;Dbxref=Genbank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215321.1;transl_table=11
NC_017154.1	RefSeq	gene	3299808	3300410	.	-	.	ID=gene3039;Name=YPD4_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15240;old_locus_tag=YPD4_2589
NC_017154.1	Protein Homology	CDS	3299808	3300410	.	-	0	ID=cds2991;Parent=gene3039;Dbxref=Genbank:WP_002211590.1;Name=WP_002211590.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211590.1;transl_table=11
NC_017154.1	RefSeq	gene	3301665	3302759	.	-	.	ID=gene3040;Name=YPD4_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15245;old_locus_tag=YPD4_2590
NC_017154.1	Protein Homology	CDS	3301665	3302759	.	-	0	ID=cds2992;Parent=gene3040;Dbxref=Genbank:WP_002211594.1;Name=WP_002211594.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;product=murein hydrolase B;protein_id=WP_002211594.1;transl_table=11
NC_017154.1	RefSeq	gene	3303088	3304107	.	+	.	ID=gene3041;Name=YPD4_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15250;old_locus_tag=YPD4_2591
NC_017154.1	Protein Homology	CDS	3303088	3304107	.	+	0	ID=cds2993;Parent=gene3041;Dbxref=Genbank:WP_002211596.1;Name=WP_002211596.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211596.1;transl_table=11
NC_017154.1	RefSeq	gene	3304163	3305749	.	+	.	ID=gene3042;Name=YPD4_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15255;old_locus_tag=YPD4_2592
NC_017154.1	Protein Homology	CDS	3304163	3305749	.	+	0	ID=cds2994;Parent=gene3042;Dbxref=Genbank:WP_002215840.1;Name=WP_002215840.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002215840.1;transl_table=11
NC_017154.1	RefSeq	gene	3305746	3306795	.	+	.	ID=gene3043;Name=YPD4_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15260;old_locus_tag=YPD4_2593
NC_017154.1	Protein Homology	CDS	3305746	3306795	.	+	0	ID=cds2995;Parent=gene3043;Dbxref=Genbank:WP_002211598.1;Name=WP_002211598.1;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=WP_002211598.1;transl_table=11
NC_017154.1	RefSeq	gene	3306868	3307392	.	-	.	ID=gene3044;Name=YPD4_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15265;old_locus_tag=YPD4_2594
NC_017154.1	Protein Homology	CDS	3306868	3307392	.	-	0	ID=cds2996;Parent=gene3044;Dbxref=Genbank:WP_002211599.1;Name=WP_002211599.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211599.1;transl_table=11
NC_017154.1	RefSeq	gene	3307859	3308338	.	+	.	ID=gene3045;Name=YPD4_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15270
NC_017154.1	Protein Homology	CDS	3307859	3308338	.	+	0	ID=cds2997;Parent=gene3045;Dbxref=Genbank:WP_002354621.1;Name=WP_002354621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354621.1;transl_table=11
NC_017154.1	RefSeq	gene	3308568	3309416	.	-	.	ID=gene3046;Name=YPD4_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15275;old_locus_tag=YPD4_2595
NC_017154.1	Protein Homology	CDS	3308568	3309416	.	-	0	ID=cds2998;Parent=gene3046;Dbxref=Genbank:WP_002211601.1;Name=WP_002211601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211601.1;transl_table=11
NC_017154.1	RefSeq	gene	3310247	3312673	.	+	.	ID=gene3047;Name=YPD4_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15280;old_locus_tag=YPD4_2596
NC_017154.1	Protein Homology	CDS	3310247	3312673	.	+	0	ID=cds2999;Parent=gene3047;Dbxref=Genbank:WP_002211602.1;Name=WP_002211602.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002211602.1;transl_table=11
NC_017154.1	RefSeq	gene	3312685	3313302	.	+	.	ID=gene3048;Name=YPD4_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15285;old_locus_tag=YPD4_2597
NC_017154.1	Protein Homology	CDS	3312685	3313302	.	+	0	ID=cds3000;Parent=gene3048;Dbxref=Genbank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit B;protein_id=WP_002211603.1;transl_table=11
NC_017154.1	RefSeq	gene	3313304	3314080	.	+	.	ID=gene3049;Name=YPD4_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15290;old_locus_tag=YPD4_2598
NC_017154.1	Protein Homology	CDS	3313304	3314080	.	+	0	ID=cds3001;Parent=gene3049;Dbxref=Genbank:WP_002211604.1;Name=WP_002211604.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211604.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3314186	3314536	.	+	.	ID=id248;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3314562	3315158	.	+	.	ID=gene3050;Name=YPD4_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15295;old_locus_tag=YPD4_2599
NC_017154.1	Protein Homology	CDS	3314562	3315158	.	+	0	ID=cds3002;Parent=gene3050;Dbxref=Genbank:WP_002228419.1;Name=WP_002228419.1;gbkey=CDS;product=nitrate reductase subunit delta;protein_id=WP_002228419.1;transl_table=11
NC_017154.1	RefSeq	gene	3315155	3315724	.	+	.	ID=gene3051;Name=YPD4_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15300;old_locus_tag=YPD4_2600
NC_017154.1	Protein Homology	CDS	3315155	3315724	.	+	0	ID=cds3003;Parent=gene3051;Dbxref=Genbank:WP_002211606.1;Name=WP_002211606.1;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=WP_002211606.1;transl_table=11
NC_017154.1	RefSeq	gene	3315970	3316626	.	-	.	ID=gene3052;Name=YPD4_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15305;old_locus_tag=YPD4_2601
NC_017154.1	Protein Homology	CDS	3315970	3316626	.	-	0	ID=cds3004;Parent=gene3052;Dbxref=Genbank:WP_002211607.1;Name=WP_002211607.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211607.1;transl_table=11
NC_017154.1	RefSeq	gene	3316623	3316979	.	-	.	ID=gene3053;Name=YPD4_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15310;old_locus_tag=YPD4_2602
NC_017154.1	Protein Homology	CDS	3316623	3316979	.	-	0	ID=cds3005;Parent=gene3053;Dbxref=Genbank:WP_002215846.1;Name=WP_002215846.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215846.1;transl_table=11
NC_017154.1	RefSeq	gene	3317006	3317677	.	-	.	ID=gene3054;Name=YPD4_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15315;old_locus_tag=YPD4_2603
NC_017154.1	Protein Homology	CDS	3317006	3317677	.	-	0	ID=cds3006;Parent=gene3054;Dbxref=Genbank:WP_002215847.1;Name=WP_002215847.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215847.1;transl_table=11
NC_017154.1	RefSeq	gene	3318267	3318698	.	+	.	ID=gene3055;Name=YPD4_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15320;old_locus_tag=YPD4_2604
NC_017154.1	Protein Homology	CDS	3318267	3318698	.	+	0	ID=cds3007;Parent=gene3055;Dbxref=Genbank:WP_002211610.1;Name=WP_002211610.1;gbkey=CDS;product=antitoxin HicB;protein_id=WP_002211610.1;transl_table=11
NC_017154.1	RefSeq	gene	3318793	3319317	.	-	.	ID=gene3056;Name=YPD4_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15325;old_locus_tag=YPD4_2605
NC_017154.1	Protein Homology	CDS	3318793	3319317	.	-	0	ID=cds3008;Parent=gene3056;Dbxref=Genbank:WP_002211611.1;Name=WP_002211611.1;gbkey=CDS;product=cytochrome B;protein_id=WP_002211611.1;transl_table=11
NC_017154.1	RefSeq	gene	3319581	3320816	.	-	.	ID=gene3057;Name=YPD4_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15330;old_locus_tag=YPD4_2606
NC_017154.1	Protein Homology	CDS	3319581	3320816	.	-	0	ID=cds3009;Parent=gene3057;Dbxref=Genbank:WP_002211613.1;Name=WP_002211613.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002211613.1;transl_table=11
NC_017154.1	RefSeq	gene	3321082	3322329	.	+	.	ID=gene3058;Name=YPD4_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15335;old_locus_tag=YPD4_2607
NC_017154.1	Protein Homology	CDS	3321082	3322329	.	+	0	ID=cds3010;Parent=gene3058;Dbxref=Genbank:WP_002211614.1;Name=WP_002211614.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211614.1;transl_table=11
NC_017154.1	RefSeq	gene	3322407	3323378	.	-	.	ID=gene3059;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=YPD4_RS15340;old_locus_tag=YPD4_2608
NC_017154.1	Protein Homology	CDS	3322407	3323378	.	-	0	ID=cds3011;Parent=gene3059;Dbxref=Genbank:WP_002211615.1;Name=WP_002211615.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=WP_002211615.1;transl_table=11
NC_017154.1	RefSeq	gene	3323559	3324035	.	-	.	ID=gene3060;Name=YPD4_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15345;old_locus_tag=YPD4_2609
NC_017154.1	Protein Homology	CDS	3323559	3324035	.	-	0	ID=cds3012;Parent=gene3060;Dbxref=Genbank:WP_002211616.1;Name=WP_002211616.1;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002211616.1;transl_table=11
NC_017154.1	RefSeq	gene	3324138	3325016	.	+	.	ID=gene3061;Name=YPD4_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15350;old_locus_tag=YPD4_2610
NC_017154.1	Protein Homology	CDS	3324138	3325016	.	+	0	ID=cds3013;Parent=gene3061;Dbxref=Genbank:WP_002211617.1;Name=WP_002211617.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211617.1;transl_table=11
NC_017154.1	RefSeq	gene	3325152	3326141	.	+	.	ID=gene3062;Name=YPD4_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15355;old_locus_tag=YPD4_2611
NC_017154.1	Protein Homology	CDS	3325152	3326141	.	+	0	ID=cds3014;Parent=gene3062;Dbxref=Genbank:WP_002211618.1;Name=WP_002211618.1;gbkey=CDS;product=glyceraldehyde 3-phosphate reductase;protein_id=WP_002211618.1;transl_table=11
NC_017154.1	RefSeq	gene	3326411	3326725	.	+	.	ID=gene3063;Name=YPD4_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15360
NC_017154.1	Protein Homology	CDS	3326411	3326725	.	+	0	ID=cds3015;Parent=gene3063;Dbxref=Genbank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354622.1;transl_table=11
NC_017154.1	RefSeq	gene	3326818	3328047	.	-	.	ID=gene3064;Name=YPD4_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15365;old_locus_tag=YPD4_2613
NC_017154.1	Protein Homology	CDS	3326818	3328047	.	-	0	ID=cds3016;Parent=gene3064;Dbxref=Genbank:WP_002211621.1;Name=WP_002211621.1;gbkey=CDS;product=divalent metal cation transporter MntH;protein_id=WP_002211621.1;transl_table=11
NC_017154.1	RefSeq	gene	3328498	3329682	.	+	.	ID=gene3065;Name=YPD4_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15370;old_locus_tag=YPD4_2614
NC_017154.1	Protein Homology	CDS	3328498	3329682	.	+	0	ID=cds3017;Parent=gene3065;Dbxref=Genbank:WP_002211622.1;Name=WP_002211622.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_002211622.1;transl_table=11
NC_017154.1	RefSeq	gene	3330059	3330134	.	-	.	ID=gene3066;Name=YPD4_RS15375;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS15375;old_locus_tag=YPD4_t40
NC_017154.1	tRNAscan-SE	tRNA	3330059	3330134	.	-	.	ID=rna45;Parent=gene3066;anticodon=(pos:complement(3330099..3330101));gbkey=tRNA;product=tRNA-Lys
NC_017154.1	tRNAscan-SE	exon	3330059	3330134	.	-	.	ID=id249;Parent=rna45;anticodon=(pos:complement(3330099..3330101));gbkey=tRNA;product=tRNA-Lys
NC_017154.1	RefSeq	gene	3330334	3330409	.	-	.	ID=gene3067;Name=YPD4_RS15380;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS15380;old_locus_tag=YPD4_t41
NC_017154.1	tRNAscan-SE	tRNA	3330334	3330409	.	-	.	ID=rna46;Parent=gene3067;anticodon=(pos:complement(3330374..3330376));gbkey=tRNA;product=tRNA-Val
NC_017154.1	tRNAscan-SE	exon	3330334	3330409	.	-	.	ID=id250;Parent=rna46;anticodon=(pos:complement(3330374..3330376));gbkey=tRNA;product=tRNA-Val
NC_017154.1	RefSeq	gene	3330454	3330529	.	-	.	ID=gene3068;Name=YPD4_RS15385;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS15385;old_locus_tag=YPD4_t42
NC_017154.1	tRNAscan-SE	tRNA	3330454	3330529	.	-	.	ID=rna47;Parent=gene3068;anticodon=(pos:complement(3330494..3330496));gbkey=tRNA;product=tRNA-Val
NC_017154.1	tRNAscan-SE	exon	3330454	3330529	.	-	.	ID=id251;Parent=rna47;anticodon=(pos:complement(3330494..3330496));gbkey=tRNA;product=tRNA-Val
NC_017154.1	RefSeq	gene	3330566	3330641	.	-	.	ID=gene3069;Name=YPD4_RS15390;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS15390;old_locus_tag=YPD4_t43
NC_017154.1	tRNAscan-SE	tRNA	3330566	3330641	.	-	.	ID=rna48;Parent=gene3069;anticodon=(pos:complement(3330606..3330608));gbkey=tRNA;product=tRNA-Val
NC_017154.1	tRNAscan-SE	exon	3330566	3330641	.	-	.	ID=id252;Parent=rna48;anticodon=(pos:complement(3330606..3330608));gbkey=tRNA;product=tRNA-Val
NC_017154.1	RefSeq	gene	3330916	3332331	.	+	.	ID=gene3070;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=YPD4_RS15395;old_locus_tag=YPD4_2615
NC_017154.1	Protein Homology	CDS	3330916	3332331	.	+	0	ID=cds3018;Parent=gene3070;Dbxref=Genbank:WP_002222185.1;Name=WP_002222185.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_002222185.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3332368	3333092	.	+	.	ID=id253;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3332524	3332982	.	+	.	ID=gene3071;Name=YPD4_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15400;old_locus_tag=YPD4_2616
NC_017154.1	Protein Homology	CDS	3332524	3332982	.	+	0	ID=cds3019;Parent=gene3071;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	3333273	3333348	.	+	.	ID=gene3072;Name=YPD4_RS15405;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS15405;old_locus_tag=YPD4_t44
NC_017154.1	tRNAscan-SE	tRNA	3333273	3333348	.	+	.	ID=rna49;Parent=gene3072;anticodon=(pos:3333306..3333308);gbkey=tRNA;product=tRNA-Ala
NC_017154.1	tRNAscan-SE	exon	3333273	3333348	.	+	.	ID=id254;Parent=rna49;anticodon=(pos:3333306..3333308);gbkey=tRNA;product=tRNA-Ala
NC_017154.1	RefSeq	gene	3333426	3333501	.	+	.	ID=gene3073;Name=YPD4_RS15410;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS15410;old_locus_tag=YPD4_t45
NC_017154.1	tRNAscan-SE	tRNA	3333426	3333501	.	+	.	ID=rna50;Parent=gene3073;anticodon=(pos:3333459..3333461);gbkey=tRNA;product=tRNA-Ala
NC_017154.1	tRNAscan-SE	exon	3333426	3333501	.	+	.	ID=id255;Parent=rna50;anticodon=(pos:3333459..3333461);gbkey=tRNA;product=tRNA-Ala
NC_017154.1	RefSeq	gene	3333696	3334301	.	+	.	ID=gene3074;Name=YPD4_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15415;old_locus_tag=YPD4_2617
NC_017154.1	Protein Homology	CDS	3333696	3334301	.	+	0	ID=cds3020;Parent=gene3074;Dbxref=Genbank:WP_002213374.1;Name=WP_002213374.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002213374.1;transl_table=11
NC_017154.1	RefSeq	gene	3334433	3334780	.	+	.	ID=gene3075;Name=YPD4_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15420;old_locus_tag=YPD4_2618
NC_017154.1	Protein Homology	CDS	3334433	3334780	.	+	0	ID=cds3021;Parent=gene3075;Dbxref=Genbank:WP_002213372.1;Name=WP_002213372.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213372.1;transl_table=11
NC_017154.1	RefSeq	gene	3334881	3335096	.	-	.	ID=gene3076;Name=YPD4_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15425
NC_017154.1	Protein Homology	CDS	3334881	3335096	.	-	0	ID=cds3022;Parent=gene3076;Dbxref=Genbank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213369.1;transl_table=11
NC_017154.1	RefSeq	gene	3335116	3337128	.	-	.	ID=gene3077;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=YPD4_RS15430;old_locus_tag=YPD4_2619
NC_017154.1	Protein Homology	CDS	3335116	3337128	.	-	0	ID=cds3023;Parent=gene3077;Dbxref=Genbank:WP_002213368.1;Name=WP_002213368.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=DNA ligase;protein_id=WP_002213368.1;transl_table=11
NC_017154.1	RefSeq	gene	3337219	3338205	.	-	.	ID=gene3078;Name=YPD4_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15435;old_locus_tag=YPD4_2620
NC_017154.1	Protein Homology	CDS	3337219	3338205	.	-	0	ID=cds3024;Parent=gene3078;Dbxref=Genbank:WP_002227089.1;Name=WP_002227089.1;gbkey=CDS;product=Cell division protein ZipA homolog;protein_id=WP_002227089.1;transl_table=11
NC_017154.1	RefSeq	gene	3338454	3339187	.	+	.	ID=gene3079;Name=YPD4_RS15440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS15440;old_locus_tag=YPD4_2621;pseudo=true
NC_017154.1	Protein Homology	CDS	3338454	3339187	.	+	0	ID=cds3025;Parent=gene3079;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sulfate transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3339344	3340312	.	+	.	ID=gene3080;Name=YPD4_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15445;old_locus_tag=YPD4_2622
NC_017154.1	Protein Homology	CDS	3339344	3340312	.	+	0	ID=cds3026;Parent=gene3080;Dbxref=Genbank:WP_002222180.1;Name=WP_002222180.1;gbkey=CDS;product=cysteine synthase A;protein_id=WP_002222180.1;transl_table=11
NC_017154.1	RefSeq	gene	3340811	3341068	.	+	.	ID=gene3081;Name=YPD4_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15450
NC_017154.1	Protein Homology	CDS	3340811	3341068	.	+	0	ID=cds3027;Parent=gene3081;Dbxref=Genbank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002208488.1;transl_table=11
NC_017154.1	RefSeq	gene	3341117	3342844	.	+	.	ID=gene3082;Name=YPD4_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15455;old_locus_tag=YPD4_2623
NC_017154.1	Protein Homology	CDS	3341117	3342844	.	+	0	ID=cds3028;Parent=gene3082;Dbxref=Genbank:WP_002208490.1;Name=WP_002208490.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002208490.1;transl_table=11
NC_017154.1	RefSeq	gene	3342893	3343402	.	+	.	ID=gene3083;Name=YPD4_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15460;old_locus_tag=YPD4_2624
NC_017154.1	Protein Homology	CDS	3342893	3343402	.	+	0	ID=cds3029;Parent=gene3083;Dbxref=Genbank:WP_002208491.1;Name=WP_002208491.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3343435	3344156	.	+	.	ID=id256;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3343545	3344003	.	-	.	ID=gene3084;Name=YPD4_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15465;old_locus_tag=YPD4_2625
NC_017154.1	Protein Homology	CDS	3343545	3344003	.	-	0	ID=cds3030;Parent=gene3084;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	3343993	3344187	.	-	.	ID=gene3085;Name=YPD4_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15470
NC_017154.1	Protein Homology	CDS	3343993	3344187	.	-	0	ID=cds3031;Parent=gene3085;Dbxref=Genbank:WP_002430126.1;Name=WP_002430126.1;gbkey=CDS;product=invasin;protein_id=WP_002430126.1;transl_table=11
NC_017154.1	RefSeq	gene	3344273	3345622	.	-	.	ID=gene3086;Name=YPD4_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15475;old_locus_tag=YPD4_2626
NC_017154.1	Protein Homology	CDS	3344273	3345622	.	-	0	ID=cds3032;Parent=gene3086;Dbxref=Genbank:WP_002208493.1;Name=WP_002208493.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208493.1;transl_table=11
NC_017154.1	RefSeq	gene	3345648	3346331	.	-	.	ID=gene3087;Name=YPD4_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15480;old_locus_tag=YPD4_2627
NC_017154.1	Protein Homology	CDS	3345648	3346331	.	-	0	ID=cds3033;Parent=gene3087;Dbxref=Genbank:WP_002208494.1;Name=WP_002208494.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208494.1;transl_table=11
NC_017154.1	RefSeq	gene	3346519	3347724	.	+	.	ID=gene3088;Name=YPD4_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15485;old_locus_tag=YPD4_2628
NC_017154.1	Protein Homology	CDS	3346519	3347724	.	+	0	ID=cds3034;Parent=gene3088;Dbxref=Genbank:WP_002208495.1;Name=WP_002208495.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002208495.1;transl_table=11
NC_017154.1	RefSeq	gene	3347728	3349764	.	+	.	ID=gene3089;Name=YPD4_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15490;old_locus_tag=YPD4_2629
NC_017154.1	Protein Homology	CDS	3347728	3349764	.	+	0	ID=cds3035;Parent=gene3089;Dbxref=Genbank:WP_002208496.1;Name=WP_002208496.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002208496.1;transl_table=11
NC_017154.1	RefSeq	gene	3350019	3351665	.	-	.	ID=gene3090;Name=YPD4_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15495;old_locus_tag=YPD4_2630
NC_017154.1	Protein Homology	CDS	3350019	3351665	.	-	0	ID=cds3036;Parent=gene3090;Dbxref=Genbank:WP_002208497.1;Name=WP_002208497.1;gbkey=CDS;product=CoA-disulfide reductase;protein_id=WP_002208497.1;transl_table=11
NC_017154.1	RefSeq	gene	3351725	3353185	.	-	.	ID=gene3091;Name=YPD4_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15500;old_locus_tag=YPD4_2631
NC_017154.1	Protein Homology	CDS	3351725	3353185	.	-	0	ID=cds3037;Parent=gene3091;Dbxref=Genbank:WP_002208498.1;Name=WP_002208498.1;gbkey=CDS;product=permease;protein_id=WP_002208498.1;transl_table=11
NC_017154.1	RefSeq	gene	3353182	3353379	.	-	.	ID=gene3092;Name=YPD4_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15505
NC_017154.1	Protein Homology	CDS	3353182	3353379	.	-	0	ID=cds3038;Parent=gene3092;Dbxref=Genbank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215023.1;transl_table=11
NC_017154.1	RefSeq	gene	3353522	3354529	.	-	.	ID=gene3093;Name=YPD4_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15510;old_locus_tag=YPD4_2632
NC_017154.1	Protein Homology	CDS	3353522	3354529	.	-	0	ID=cds3039;Parent=gene3093;Dbxref=Genbank:WP_002228411.1;Name=WP_002228411.1;gbkey=CDS;product=peptidase M24;protein_id=WP_002228411.1;transl_table=11
NC_017154.1	RefSeq	gene	3354550	3354741	.	-	.	ID=gene3094;Name=YPD4_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15515
NC_017154.1	Protein Homology	CDS	3354550	3354741	.	-	0	ID=cds3040;Parent=gene3094;Dbxref=Genbank:WP_002215018.1;Name=WP_002215018.1;gbkey=CDS;product=creatininase;protein_id=WP_002215018.1;transl_table=11
NC_017154.1	RefSeq	gene	3354775	3355956	.	-	.	ID=gene3095;Name=YPD4_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15520;old_locus_tag=YPD4_2633
NC_017154.1	Protein Homology	CDS	3354775	3355956	.	-	0	ID=cds3041;Parent=gene3095;Dbxref=Genbank:WP_002208500.1;Name=WP_002208500.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002208500.1;transl_table=11
NC_017154.1	RefSeq	gene	3356664	3358082	.	+	.	ID=gene3096;Name=YPD4_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15525;old_locus_tag=YPD4_2634
NC_017154.1	Protein Homology	CDS	3356664	3358082	.	+	0	ID=cds3042;Parent=gene3096;Dbxref=Genbank:WP_002208502.1;Name=WP_002208502.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208502.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3358091	3358259	.	+	.	ID=id257;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3358315	3359859	.	+	.	ID=gene3097;Name=YPD4_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15530;old_locus_tag=YPD4_2635
NC_017154.1	Protein Homology	CDS	3358315	3359859	.	+	0	ID=cds3043;Parent=gene3097;Dbxref=Genbank:WP_002208505.1;Name=WP_002208505.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208505.1;transl_table=11
NC_017154.1	RefSeq	gene	3359856	3360563	.	+	.	ID=gene3098;Name=YPD4_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15535;old_locus_tag=YPD4_2636
NC_017154.1	Protein Homology	CDS	3359856	3360563	.	+	0	ID=cds3044;Parent=gene3098;Dbxref=Genbank:WP_002224818.1;Name=WP_002224818.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002224818.1;transl_table=11
NC_017154.1	RefSeq	gene	3360944	3362176	.	-	.	ID=gene3099;Name=YPD4_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15540;old_locus_tag=YPD4_2637
NC_017154.1	Protein Homology	CDS	3360944	3362176	.	-	0	ID=cds3045;Parent=gene3099;Dbxref=Genbank:WP_002208507.1;Name=WP_002208507.1;gbkey=CDS;product=type III secretion protein GogB;protein_id=WP_002208507.1;transl_table=11
NC_017154.1	RefSeq	gene	3362421	3363299	.	-	.	ID=gene3100;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=YPD4_RS15545;old_locus_tag=YPD4_2638
NC_017154.1	Protein Homology	CDS	3362421	3363299	.	-	0	ID=cds3046;Parent=gene3100;Dbxref=Genbank:WP_002208508.1;Name=WP_002208508.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=WP_002208508.1;transl_table=11
NC_017154.1	RefSeq	gene	3363470	3364561	.	-	.	ID=gene3101;Name=YPD4_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15550;old_locus_tag=YPD4_2639
NC_017154.1	Protein Homology	CDS	3363470	3364561	.	-	0	ID=cds3047;Parent=gene3101;Dbxref=Genbank:WP_002208509.1;Name=WP_002208509.1;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=WP_002208509.1;transl_table=11
NC_017154.1	RefSeq	gene	3364551	3365426	.	-	.	ID=gene3102;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=YPD4_RS15555;old_locus_tag=YPD4_2640
NC_017154.1	Protein Homology	CDS	3364551	3365426	.	-	0	ID=cds3048;Parent=gene3102;Dbxref=Genbank:WP_002208510.1;Name=WP_002208510.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate transporter permease subunit;protein_id=WP_002208510.1;transl_table=11
NC_017154.1	RefSeq	gene	3365426	3366259	.	-	.	ID=gene3103;Name=YPD4_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15560;old_locus_tag=YPD4_2641
NC_017154.1	Protein Homology	CDS	3365426	3366259	.	-	0	ID=cds3049;Parent=gene3103;Dbxref=Genbank:WP_002208511.1;Name=WP_002208511.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_002208511.1;transl_table=11
NC_017154.1	RefSeq	gene	3366259	3367296	.	-	.	ID=gene3104;Name=YPD4_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15565;old_locus_tag=YPD4_2642
NC_017154.1	Protein Homology	CDS	3366259	3367296	.	-	0	ID=cds3050;Parent=gene3104;Dbxref=Genbank:WP_002208512.1;Name=WP_002208512.1;gbkey=CDS;product=thiosulfate transporter subunit;protein_id=WP_002208512.1;transl_table=11
NC_017154.1	RefSeq	gene	3367611	3369143	.	-	.	ID=gene3105;Name=YPD4_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15570;old_locus_tag=YPD4_2643
NC_017154.1	Protein Homology	CDS	3367611	3369143	.	-	0	ID=cds3051;Parent=gene3105;Dbxref=Genbank:WP_002208513.1;Name=WP_002208513.1;gbkey=CDS;product=sialic acid transporter;protein_id=WP_002208513.1;transl_table=11
NC_017154.1	RefSeq	gene	3369748	3370627	.	-	.	ID=gene3106;Name=YPD4_RS15575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS15575;old_locus_tag=YPD4_2644;pseudo=true
NC_017154.1	Protein Homology	CDS	3369748	3370627	.	-	0	ID=cds3052;Parent=gene3106;exception=annotated by transcript or proteomic data;gbkey=CDS;product=N-acetylmannosamine kinase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3370624	3370776	.	-	.	ID=gene3107;Name=YPD4_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15580
NC_017154.1	Protein Homology	CDS	3370624	3370776	.	-	0	ID=cds3053;Parent=gene3107;Dbxref=Genbank:WP_002215009.1;Name=WP_002215009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215009.1;transl_table=11
NC_017154.1	RefSeq	gene	3370816	3371286	.	-	.	ID=gene3108;Name=YPD4_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15585;old_locus_tag=YPD4_2645
NC_017154.1	Protein Homology	CDS	3370816	3371286	.	-	0	ID=cds3054;Parent=gene3108;Dbxref=Genbank:WP_002208515.1;Name=WP_002208515.1;gbkey=CDS;product=sugar isomerase;protein_id=WP_002208515.1;transl_table=11
NC_017154.1	RefSeq	gene	3371368	3372240	.	-	.	ID=gene3109;Name=YPD4_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15590;old_locus_tag=YPD4_2646
NC_017154.1	Protein Homology	CDS	3371368	3372240	.	-	0	ID=cds3055;Parent=gene3109;Dbxref=Genbank:WP_002208516.1;Name=WP_002208516.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208516.1;transl_table=11
NC_017154.1	RefSeq	gene	3372510	3373007	.	+	.	ID=gene3110;Name=YPD4_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15595;old_locus_tag=YPD4_2647
NC_017154.1	Protein Homology	CDS	3372510	3373007	.	+	0	ID=cds3056;Parent=gene3110;Dbxref=Genbank:WP_015683993.1;Name=WP_015683993.1;gbkey=CDS;product=membrane protein;protein_id=WP_015683993.1;transl_table=11
NC_017154.1	RefSeq	gene	3373853	3374476	.	+	.	ID=gene3111;Name=YPD4_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15600;old_locus_tag=YPD4_2649
NC_017154.1	Protein Homology	CDS	3373853	3374476	.	+	0	ID=cds3057;Parent=gene3111;Dbxref=Genbank:WP_002354634.1;Name=WP_002354634.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_002354634.1;transl_table=11
NC_017154.1	RefSeq	gene	3374539	3375432	.	+	.	ID=gene3112;Name=YPD4_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15605;old_locus_tag=YPD4_2650
NC_017154.1	Protein Homology	CDS	3374539	3375432	.	+	0	ID=cds3058;Parent=gene3112;Dbxref=Genbank:WP_002208518.1;Name=WP_002208518.1;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=WP_002208518.1;transl_table=11
NC_017154.1	RefSeq	gene	3375530	3376429	.	-	.	ID=gene3113;Name=YPD4_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15610;old_locus_tag=YPD4_2651
NC_017154.1	Protein Homology	CDS	3375530	3376429	.	-	0	ID=cds3059;Parent=gene3113;Dbxref=Genbank:WP_002208519.1;Name=WP_002208519.1;gbkey=CDS;product=deferrochelatase/peroxidase YfeX;protein_id=WP_002208519.1;transl_table=11
NC_017154.1	RefSeq	gene	3376607	3377218	.	-	.	ID=gene3114;Name=YPD4_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15615;old_locus_tag=YPD4_2652
NC_017154.1	Protein Homology	CDS	3376607	3377218	.	-	0	ID=cds3060;Parent=gene3114;Dbxref=Genbank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208521.1;transl_table=11
NC_017154.1	RefSeq	gene	3377577	3377990	.	+	.	ID=gene3115;Name=YPD4_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15620;old_locus_tag=YPD4_2653
NC_017154.1	Protein Homology	CDS	3377577	3377990	.	+	0	ID=cds3061;Parent=gene3115;Dbxref=Genbank:WP_002208522.1;Name=WP_002208522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208522.1;transl_table=11
NC_017154.1	RefSeq	gene	3378477	3380756	.	+	.	ID=gene3116;Name=YPD4_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15625;old_locus_tag=YPD4_2654
NC_017154.1	Protein Homology	CDS	3378477	3380756	.	+	0	ID=cds3062;Parent=gene3116;Dbxref=Genbank:WP_002208523.1;Name=WP_002208523.1;gbkey=CDS;product=autotransporter;protein_id=WP_002208523.1;transl_table=11
NC_017154.1	RefSeq	gene	3380848	3381264	.	-	.	ID=gene3117;Name=YPD4_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15630;old_locus_tag=YPD4_2655
NC_017154.1	Protein Homology	CDS	3380848	3381264	.	-	0	ID=cds3063;Parent=gene3117;Dbxref=Genbank:WP_002208524.1;Name=WP_002208524.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208524.1;transl_table=11
NC_017154.1	RefSeq	gene	3381370	3381555	.	+	.	ID=gene3118;Name=YPD4_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15635
NC_017154.1	Protein Homology	CDS	3381370	3381555	.	+	0	ID=cds3064;Parent=gene3118;Dbxref=Genbank:WP_002216562.1;Name=WP_002216562.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216562.1;transl_table=11
NC_017154.1	RefSeq	gene	3381737	3382162	.	-	.	ID=gene3119;Name=YPD4_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15640;old_locus_tag=YPD4_2656
NC_017154.1	Protein Homology	CDS	3381737	3382162	.	-	0	ID=cds3065;Parent=gene3119;Dbxref=Genbank:WP_002208525.1;Name=WP_002208525.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208525.1;transl_table=11
NC_017154.1	RefSeq	gene	3382445	3383374	.	+	.	ID=gene3120;Name=YPD4_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15645;old_locus_tag=YPD4_2657
NC_017154.1	Protein Homology	CDS	3382445	3383374	.	+	0	ID=cds3066;Parent=gene3120;Dbxref=Genbank:WP_002208526.1;Name=WP_002208526.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002208526.1;transl_table=11
NC_017154.1	RefSeq	gene	3383374	3383832	.	+	.	ID=gene3121;Name=YPD4_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15650;old_locus_tag=YPD4_2658
NC_017154.1	Protein Homology	CDS	3383374	3383832	.	+	0	ID=cds3067;Parent=gene3121;Dbxref=Genbank:WP_002208527.1;Name=WP_002208527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208527.1;transl_table=11
NC_017154.1	RefSeq	gene	3383983	3386262	.	-	.	ID=gene3122;Name=YPD4_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15655;old_locus_tag=YPD4_2659
NC_017154.1	Protein Homology	CDS	3383983	3386262	.	-	0	ID=cds3068;Parent=gene3122;Dbxref=Genbank:WP_002224829.1;Name=WP_002224829.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=NADP-dependent malic enzyme;protein_id=WP_002224829.1;transl_table=11
NC_017154.1	RefSeq	gene	3386458	3387054	.	-	.	ID=gene3123;Name=YPD4_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15660;old_locus_tag=YPD4_2660
NC_017154.1	Protein Homology	CDS	3386458	3387054	.	-	0	ID=cds3069;Parent=gene3123;Dbxref=Genbank:WP_002208529.1;Name=WP_002208529.1;gbkey=CDS;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002208529.1;transl_table=11
NC_017154.1	RefSeq	gene	3387238	3387837	.	-	.	ID=gene3124;Name=YPD4_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15665;old_locus_tag=YPD4_2661
NC_017154.1	Protein Homology	CDS	3387238	3387837	.	-	0	ID=cds3070;Parent=gene3124;Dbxref=Genbank:WP_002228406.1;Name=WP_002228406.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;product=cytochrome C protein NapC;protein_id=WP_002228406.1;transl_table=11
NC_017154.1	RefSeq	gene	3387865	3388332	.	-	.	ID=gene3125;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=YPD4_RS15670;old_locus_tag=YPD4_2662
NC_017154.1	Protein Homology	CDS	3387865	3388332	.	-	0	ID=cds3071;Parent=gene3125;Dbxref=Genbank:WP_002208532.1;Name=WP_002208532.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=nitrate reductase cytochrome C550 subunit;protein_id=WP_002208532.1;transl_table=11
NC_017154.1	RefSeq	gene	3388415	3390907	.	-	.	ID=gene3126;Name=YPD4_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15675;old_locus_tag=YPD4_2663
NC_017154.1	Protein Homology	CDS	3388415	3390907	.	-	0	ID=cds3072;Parent=gene3126;Dbxref=Genbank:WP_002208534.1;Name=WP_002208534.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;product=periplasmic nitrate reductase;protein_id=WP_002208534.1;transl_table=11
NC_017154.1	RefSeq	gene	3390904	3391170	.	-	.	ID=gene3127;Name=YPD4_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15680
NC_017154.1	Protein Homology	CDS	3390904	3391170	.	-	0	ID=cds3073;Parent=gene3127;Dbxref=Genbank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002208535.1;transl_table=11
NC_017154.1	RefSeq	gene	3391160	3391663	.	-	.	ID=gene3128;Name=YPD4_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15685;old_locus_tag=YPD4_2664
NC_017154.1	Protein Homology	CDS	3391160	3391663	.	-	0	ID=cds3074;Parent=gene3128;Dbxref=Genbank:WP_002208536.1;Name=WP_002208536.1;gbkey=CDS;product=ferredoxin-type protein NapF;protein_id=WP_002208536.1;transl_table=11
NC_017154.1	RefSeq	gene	3392496	3393125	.	+	.	ID=gene3129;Name=YPD4_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15690;old_locus_tag=YPD4_2665
NC_017154.1	Protein Homology	CDS	3392496	3393125	.	+	0	ID=cds3075;Parent=gene3129;Dbxref=Genbank:WP_002208537.1;Name=WP_002208537.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208537.1;transl_table=11
NC_017154.1	RefSeq	gene	3393138	3393416	.	-	.	ID=gene3130;Name=YPD4_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15695
NC_017154.1	Protein Homology	CDS	3393138	3393416	.	-	0	ID=cds3076;Parent=gene3130;Dbxref=Genbank:WP_002208538.1;Name=WP_002208538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208538.1;transl_table=11
NC_017154.1	RefSeq	gene	3393831	3396962	.	+	.	ID=gene3131;Name=YPD4_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15700;old_locus_tag=YPD4_2666
NC_017154.1	Protein Homology	CDS	3393831	3396962	.	+	0	ID=cds3077;Parent=gene3131;Dbxref=Genbank:WP_002208539.1;Name=WP_002208539.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002208539.1;transl_table=11
NC_017154.1	RefSeq	gene	3397193	3397777	.	+	.	ID=gene3132;Name=YPD4_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15705;old_locus_tag=YPD4_2667
NC_017154.1	Protein Homology	CDS	3397193	3397777	.	+	0	ID=cds3078;Parent=gene3132;Dbxref=Genbank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11
NC_017154.1	RefSeq	gene	3398066	3398614	.	+	.	ID=gene3133;Name=YPD4_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15710;old_locus_tag=YPD4_2668
NC_017154.1	Protein Homology	CDS	3398066	3398614	.	+	0	ID=cds3079;Parent=gene3133;Dbxref=Genbank:WP_002208541.1;Name=WP_002208541.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208541.1;transl_table=11
NC_017154.1	RefSeq	gene	3399368	3400543	.	-	.	ID=gene3134;Name=YPD4_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15715;old_locus_tag=YPD4_2669
NC_017154.1	Protein Homology	CDS	3399368	3400543	.	-	0	ID=cds3080;Parent=gene3134;Dbxref=Genbank:WP_002208542.1;Name=WP_002208542.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002208542.1;transl_table=11
NC_017154.1	RefSeq	gene	3400601	3402271	.	-	.	ID=gene3135;Name=YPD4_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15720;old_locus_tag=YPD4_2670
NC_017154.1	Protein Homology	CDS	3400601	3402271	.	-	0	ID=cds3081;Parent=gene3135;Dbxref=Genbank:WP_002378486.1;Name=WP_002378486.1;gbkey=CDS;product=sulfatase;protein_id=WP_002378486.1;transl_table=11
NC_017154.1	RefSeq	gene	3402752	3403822	.	-	.	ID=gene3136;Name=YPD4_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15725;old_locus_tag=YPD4_2671
NC_017154.1	Protein Homology	CDS	3402752	3403822	.	-	0	ID=cds3082;Parent=gene3136;Dbxref=Genbank:WP_002208544.1;Name=WP_002208544.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208544.1;transl_table=11
NC_017154.1	RefSeq	gene	3403815	3405584	.	-	.	ID=gene3137;Name=YPD4_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15730;old_locus_tag=YPD4_2672
NC_017154.1	Protein Homology	CDS	3403815	3405584	.	-	0	ID=cds3083;Parent=gene3137;Dbxref=Genbank:WP_002208545.1;Name=WP_002208545.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002208545.1;transl_table=11
NC_017154.1	RefSeq	gene	3405679	3406767	.	-	.	ID=gene3138;Name=YPD4_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15735;old_locus_tag=YPD4_2673
NC_017154.1	Protein Homology	CDS	3405679	3406767	.	-	0	ID=cds3084;Parent=gene3138;Dbxref=Genbank:WP_002208546.1;Name=WP_002208546.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208546.1;transl_table=11
NC_017154.1	RefSeq	gene	3407078	3407551	.	+	.	ID=gene3139;Name=YPD4_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15740;old_locus_tag=YPD4_2674
NC_017154.1	Protein Homology	CDS	3407078	3407551	.	+	0	ID=cds3085;Parent=gene3139;Dbxref=Genbank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208547.1;transl_table=11
NC_017154.1	RefSeq	gene	3407711	3408109	.	+	.	ID=gene3140;Name=YPD4_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15745;old_locus_tag=YPD4_2675
NC_017154.1	Protein Homology	CDS	3407711	3408109	.	+	0	ID=cds3086;Parent=gene3140;Dbxref=Genbank:WP_002208548.1;Name=WP_002208548.1;gbkey=CDS;product=reductase;protein_id=WP_002208548.1;transl_table=11
NC_017154.1	RefSeq	gene	3408111	3409239	.	+	.	ID=gene3141;Name=YPD4_RS15750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS15750;old_locus_tag=YPD4_2676;pseudo=true
NC_017154.1	Protein Homology	CDS	3408111	3409239	.	+	0	ID=cds3087;Parent=gene3141;exception=annotated by transcript or proteomic data;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3409236	3409913	.	+	.	ID=gene3142;Name=YPD4_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15755;old_locus_tag=YPD4_2677
NC_017154.1	Protein Homology	CDS	3409236	3409913	.	+	0	ID=cds3088;Parent=gene3142;Dbxref=Genbank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;product=carboxypeptidase;protein_id=WP_002208550.1;transl_table=11
NC_017154.1	RefSeq	gene	3409981	3410175	.	+	.	ID=gene3143;Name=YPD4_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15760
NC_017154.1	Protein Homology	CDS	3409981	3410175	.	+	0	ID=cds3089;Parent=gene3143;Dbxref=Genbank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208551.1;transl_table=11
NC_017154.1	RefSeq	gene	3410380	3412480	.	-	.	ID=gene3144;Name=YPD4_RS15765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS15765;pseudo=true
NC_017154.1	Protein Homology	CDS	3410380	3412480	.	-	0	ID=cds3090;Parent=gene3144;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;exception=annotated by transcript or proteomic data;gbkey=CDS;product=methionine tRNA cytidine acetyltransferase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3412482	3412934	.	-	.	ID=gene3145;Name=YPD4_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15770;old_locus_tag=YPD4_2680
NC_017154.1	Protein Homology	CDS	3412482	3412934	.	-	0	ID=cds3091;Parent=gene3145;Dbxref=Genbank:WP_002208553.1;Name=WP_002208553.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208553.1;transl_table=11
NC_017154.1	RefSeq	gene	3413028	3413894	.	-	.	ID=gene3146;Name=YPD4_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15775;old_locus_tag=YPD4_2681
NC_017154.1	Protein Homology	CDS	3413028	3413894	.	-	0	ID=cds3092;Parent=gene3146;Dbxref=Genbank:WP_002208554.1;Name=WP_002208554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208554.1;transl_table=11
NC_017154.1	RefSeq	gene	3414113	3414826	.	-	.	ID=gene3147;Name=YPD4_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15780;old_locus_tag=YPD4_2682
NC_017154.1	Protein Homology	CDS	3414113	3414826	.	-	0	ID=cds3093;Parent=gene3147;Dbxref=Genbank:WP_002208555.1;Name=WP_002208555.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3414864	3415581	.	+	.	ID=id258;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3414974	3415432	.	-	.	ID=gene3148;Name=YPD4_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15785;old_locus_tag=YPD4_2683
NC_017154.1	Protein Homology	CDS	3414974	3415432	.	-	0	ID=cds3094;Parent=gene3148;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	3415422	3415577	.	-	.	ID=gene3149;Name=YPD4_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15790
NC_017154.1	Protein Homology	CDS	3415422	3415577	.	-	0	ID=cds3095;Parent=gene3149;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	3415607	3416665	.	-	.	ID=gene3150;Name=YPD4_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15795;old_locus_tag=YPD4_2684
NC_017154.1	Protein Homology	CDS	3415607	3416665	.	-	0	ID=cds3096;Parent=gene3150;Dbxref=Genbank:WP_002208557.1;Name=WP_002208557.1;gbkey=CDS;product=outer membrane protein assembly factor BamC;protein_id=WP_002208557.1;transl_table=11
NC_017154.1	RefSeq	gene	3416683	3417564	.	-	.	ID=gene3151;Name=YPD4_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15800;old_locus_tag=YPD4_2685
NC_017154.1	Protein Homology	CDS	3416683	3417564	.	-	0	ID=cds3097;Parent=gene3151;Dbxref=Genbank:WP_002227834.1;Name=WP_002227834.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002227834.1;transl_table=11
NC_017154.1	RefSeq	gene	3417729	3418298	.	+	.	ID=gene3152;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=YPD4_RS15805;old_locus_tag=YPD4_2686
NC_017154.1	Protein Homology	CDS	3417729	3418298	.	+	0	ID=cds3098;Parent=gene3152;Dbxref=Genbank:WP_002227068.1;Name=WP_002227068.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_002227068.1;transl_table=11
NC_017154.1	RefSeq	gene	3418301	3418771	.	+	.	ID=gene3153;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=YPD4_RS15810;old_locus_tag=YPD4_2687
NC_017154.1	Protein Homology	CDS	3418301	3418771	.	+	0	ID=cds3099;Parent=gene3153;Dbxref=Genbank:WP_002224836.1;Name=WP_002224836.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thiol peroxidase;protein_id=WP_002224836.1;transl_table=11
NC_017154.1	RefSeq	gene	3419015	3419434	.	-	.	ID=gene3154;Name=YPD4_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15815
NC_017154.1	Protein Homology	CDS	3419015	3419434	.	-	0	ID=cds3100;Parent=gene3154;Dbxref=Genbank:WP_002217563.1;Name=WP_002217563.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217563.1;transl_table=11
NC_017154.1	RefSeq	gene	3419438	3420133	.	-	.	ID=gene3155;Name=YPD4_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15820;old_locus_tag=YPD4_2688
NC_017154.1	Protein Homology	CDS	3419438	3420133	.	-	0	ID=cds3101;Parent=gene3155;Dbxref=Genbank:WP_002208561.1;Name=WP_002208561.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208561.1;transl_table=11
NC_017154.1	RefSeq	gene	3420471	3420644	.	+	.	ID=gene3156;Name=YPD4_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15825
NC_017154.1	Protein Homology	CDS	3420471	3420644	.	+	0	ID=cds3102;Parent=gene3156;Dbxref=Genbank:WP_002217567.1;Name=WP_002217567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217567.1;transl_table=11
NC_017154.1	RefSeq	gene	3420733	3421797	.	-	.	ID=gene3157;Name=YPD4_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15830;old_locus_tag=YPD4_2689
NC_017154.1	Protein Homology	CDS	3420733	3421797	.	-	0	ID=cds3103;Parent=gene3157;Dbxref=Genbank:WP_002208563.1;Name=WP_002208563.1;gbkey=CDS;product=permease;protein_id=WP_002208563.1;transl_table=11
NC_017154.1	RefSeq	gene	3422128	3423612	.	+	.	ID=gene3158;Name=YPD4_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15835;old_locus_tag=YPD4_2690
NC_017154.1	Protein Homology	CDS	3422128	3423612	.	+	0	ID=cds3104;Parent=gene3158;Dbxref=Genbank:WP_002217569.1;Name=WP_002217569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217569.1;transl_table=11
NC_017154.1	RefSeq	gene	3423719	3424075	.	+	.	ID=gene3159;Name=YPD4_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15840;old_locus_tag=YPD4_2691
NC_017154.1	Protein Homology	CDS	3423719	3424075	.	+	0	ID=cds3105;Parent=gene3159;Dbxref=Genbank:WP_002208565.1;Name=WP_002208565.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_002208565.1;transl_table=11
NC_017154.1	RefSeq	gene	3424287	3424994	.	-	.	ID=gene3160;Name=YPD4_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15845;old_locus_tag=YPD4_2692
NC_017154.1	Protein Homology	CDS	3424287	3424994	.	-	0	ID=cds3106;Parent=gene3160;Dbxref=Genbank:WP_002228401.1;Name=WP_002228401.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_002228401.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3425073	3425791	.	+	.	ID=id259;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3425182	3425640	.	-	.	ID=gene3161;Name=YPD4_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15850;old_locus_tag=YPD4_2693
NC_017154.1	Protein Homology	CDS	3425182	3425640	.	-	0	ID=cds3107;Parent=gene3161;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	3425630	3425860	.	-	.	ID=gene3162;Name=YPD4_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15855
NC_017154.1	Protein Homology	CDS	3425630	3425860	.	-	0	ID=cds3108;Parent=gene3162;Dbxref=Genbank:WP_002430127.1;Name=WP_002430127.1;gbkey=CDS;product=invasin;protein_id=WP_002430127.1;transl_table=11
NC_017154.1	RefSeq	gene	3425987	3427372	.	-	.	ID=gene3163;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=YPD4_RS15860;old_locus_tag=YPD4_2694
NC_017154.1	Protein Homology	CDS	3425987	3427372	.	-	0	ID=cds3109;Parent=gene3163;Dbxref=Genbank:WP_002222677.1;Name=WP_002222677.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;protein_id=WP_002222677.1;transl_table=11
NC_017154.1	RefSeq	gene	3427583	3428077	.	+	.	ID=gene3164;Name=YPD4_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15865;old_locus_tag=YPD4_2695
NC_017154.1	Protein Homology	CDS	3427583	3428077	.	+	0	ID=cds3110;Parent=gene3164;Dbxref=Genbank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208567.1;transl_table=11
NC_017154.1	RefSeq	gene	3428088	3428810	.	+	.	ID=gene3165;Name=YPD4_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15870;old_locus_tag=YPD4_2696
NC_017154.1	Protein Homology	CDS	3428088	3428810	.	+	0	ID=cds3111;Parent=gene3165;Dbxref=Genbank:WP_002208568.1;Name=WP_002208568.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_002208568.1;transl_table=11
NC_017154.1	RefSeq	gene	3429106	3429630	.	+	.	ID=gene3166;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=YPD4_RS15875;old_locus_tag=YPD4_2697
NC_017154.1	Protein Homology	CDS	3429106	3429630	.	+	0	ID=cds3112;Parent=gene3166;Dbxref=Genbank:WP_002208569.1;Name=WP_002208569.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_002208569.1;transl_table=11
NC_017154.1	RefSeq	gene	3429627	3430691	.	+	.	ID=gene3167;Name=YPD4_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15880;old_locus_tag=YPD4_2698
NC_017154.1	Protein Homology	CDS	3429627	3430691	.	+	0	ID=cds3113;Parent=gene3167;Dbxref=Genbank:WP_002208570.1;Name=WP_002208570.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_002208570.1;transl_table=11
NC_017154.1	RefSeq	gene	3430735	3433165	.	-	.	ID=gene3168;Name=YPD4_RS15885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS15885;pseudo=true
NC_017154.1	Protein Homology	CDS	3430735	3433165	.	-	0	ID=cds3114;Parent=gene3168;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar ABC transporter permease;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3433162	3433848	.	-	.	ID=gene3169;Name=YPD4_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15890;old_locus_tag=YPD4_2701
NC_017154.1	Protein Homology	CDS	3433162	3433848	.	-	0	ID=cds3115;Parent=gene3169;Dbxref=Genbank:WP_002208572.1;Name=WP_002208572.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002208572.1;transl_table=11
NC_017154.1	RefSeq	gene	3433819	3434454	.	+	.	ID=gene3170;Name=YPD4_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15895;old_locus_tag=YPD4_2702
NC_017154.1	Protein Homology	CDS	3433819	3434454	.	+	0	ID=cds3116;Parent=gene3170;Dbxref=Genbank:WP_002208573.1;Name=WP_002208573.1;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11
NC_017154.1	RefSeq	gene	3434841	3435617	.	+	.	ID=gene3171;Name=YPD4_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15900;old_locus_tag=YPD4_2703
NC_017154.1	Protein Homology	CDS	3434841	3435617	.	+	0	ID=cds3117;Parent=gene3171;Dbxref=Genbank:WP_002208574.1;Name=WP_002208574.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002208574.1;transl_table=11
NC_017154.1	RefSeq	gene	3435694	3436563	.	+	.	ID=gene3172;Name=YPD4_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15905;old_locus_tag=YPD4_2704
NC_017154.1	Protein Homology	CDS	3435694	3436563	.	+	0	ID=cds3118;Parent=gene3172;Dbxref=Genbank:WP_002208575.1;Name=WP_002208575.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002208575.1;transl_table=11
NC_017154.1	RefSeq	gene	3436758	3437672	.	+	.	ID=gene3173;Name=YPD4_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15910;old_locus_tag=YPD4_2705
NC_017154.1	Protein Homology	CDS	3436758	3437672	.	+	0	ID=cds3119;Parent=gene3173;Dbxref=Genbank:WP_002208576.1;Name=WP_002208576.1;gbkey=CDS;product=protease;protein_id=WP_002208576.1;transl_table=11
NC_017154.1	RefSeq	gene	3437675	3438124	.	+	.	ID=gene3174;Name=YPD4_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15915;old_locus_tag=YPD4_2706
NC_017154.1	Protein Homology	CDS	3437675	3438124	.	+	0	ID=cds3120;Parent=gene3174;Dbxref=Genbank:WP_002208577.1;Name=WP_002208577.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208577.1;transl_table=11
NC_017154.1	RefSeq	gene	3438233	3438652	.	-	.	ID=gene3175;Name=YPD4_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15920;old_locus_tag=YPD4_2707
NC_017154.1	Protein Homology	CDS	3438233	3438652	.	-	0	ID=cds3121;Parent=gene3175;Dbxref=Genbank:WP_002208578.1;Name=WP_002208578.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208578.1;transl_table=11
NC_017154.1	RefSeq	gene	3438859	3441744	.	+	.	ID=gene3176;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=YPD4_RS15925;old_locus_tag=YPD4_2708
NC_017154.1	Protein Homology	CDS	3438859	3441744	.	+	0	ID=cds3122;Parent=gene3176;Dbxref=Genbank:WP_002208579.1;Name=WP_002208579.1;gbkey=CDS;gene=copA;product=copper-exporting P-type ATPase A;protein_id=WP_002208579.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3441815	3442225	.	+	.	ID=id260;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3442265	3443074	.	+	.	ID=gene3177;Name=YPD4_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15930;old_locus_tag=YPD4_2709
NC_017154.1	Protein Homology	CDS	3442265	3443074	.	+	0	ID=cds3123;Parent=gene3177;Dbxref=Genbank:WP_002208580.1;Name=WP_002208580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208580.1;transl_table=11
NC_017154.1	RefSeq	gene	3443338	3443817	.	+	.	ID=gene3178;Name=YPD4_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15935;old_locus_tag=YPD4_2710
NC_017154.1	Protein Homology	CDS	3443338	3443817	.	+	0	ID=cds3124;Parent=gene3178;Dbxref=Genbank:WP_002208581.1;Name=WP_002208581.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208581.1;transl_table=11
NC_017154.1	RefSeq	gene	3443883	3444140	.	+	.	ID=gene3179;Name=YPD4_RS15940;gbkey=Gene;gene_biotype=other;locus_tag=YPD4_RS15940
NC_017154.1	RefSeq	repeat_region	3443898	3444067	.	+	.	ID=id261;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3444154	3444393	.	+	.	ID=gene3180;Name=YPD4_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15945
NC_017154.1	Protein Homology	CDS	3444154	3444393	.	+	0	ID=cds3125;Parent=gene3180;Dbxref=Genbank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11
NC_017154.1	RefSeq	gene	3444497	3445120	.	-	.	ID=gene3181;Name=YPD4_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15950;old_locus_tag=YPD4_2711
NC_017154.1	Protein Homology	CDS	3444497	3445120	.	-	0	ID=cds3126;Parent=gene3181;Dbxref=Genbank:WP_002228353.1;Name=WP_002228353.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002228353.1;transl_table=11
NC_017154.1	RefSeq	gene	3445114	3445905	.	-	.	ID=gene3182;Name=YPD4_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15955;old_locus_tag=YPD4_2712
NC_017154.1	Protein Homology	CDS	3445114	3445905	.	-	0	ID=cds3127;Parent=gene3182;Dbxref=Genbank:WP_002232230.1;Name=WP_002232230.1;gbkey=CDS;product=metallophosphatase;protein_id=WP_002232230.1;transl_table=11
NC_017154.1	RefSeq	gene	3445895	3446152	.	-	.	ID=gene3183;Name=YPD4_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15960
NC_017154.1	GeneMarkS+	CDS	3445895	3446152	.	-	0	ID=cds3128;Parent=gene3183;Dbxref=Genbank:WP_002215363.1;Name=WP_002215363.1;gbkey=CDS;product=protein ushA;protein_id=WP_002215363.1;transl_table=11
NC_017154.1	RefSeq	gene	3446434	3447648	.	+	.	ID=gene3184;Name=YPD4_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15965;old_locus_tag=YPD4_2713
NC_017154.1	Protein Homology	CDS	3446434	3447648	.	+	0	ID=cds3129;Parent=gene3184;Dbxref=Genbank:WP_002208584.1;Name=WP_002208584.1;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=WP_002208584.1;transl_table=11
NC_017154.1	RefSeq	gene	3447883	3449574	.	+	.	ID=gene3185;Name=YPD4_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15970;old_locus_tag=YPD4_2714
NC_017154.1	Protein Homology	CDS	3447883	3449574	.	+	0	ID=cds3130;Parent=gene3185;Dbxref=Genbank:WP_002208585.1;Name=WP_002208585.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=cation:proton antiport protein;protein_id=WP_002208585.1;transl_table=11
NC_017154.1	RefSeq	gene	3449671	3450975	.	-	.	ID=gene3186;Name=YPD4_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15975;old_locus_tag=YPD4_2715
NC_017154.1	Protein Homology	CDS	3449671	3450975	.	-	0	ID=cds3131;Parent=gene3186;Dbxref=Genbank:WP_002208586.1;Name=WP_002208586.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11
NC_017154.1	RefSeq	gene	3451179	3452330	.	-	.	ID=gene3187;Name=YPD4_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15980
NC_017154.1	Protein Homology	CDS	3451179	3452330	.	-	0	ID=cds3132;Parent=gene3187;Dbxref=Genbank:WP_002208587.1;Name=WP_002208587.1;gbkey=CDS;product=chain-length determining protein;protein_id=WP_002208587.1;transl_table=11
NC_017154.1	RefSeq	gene	3452378	3453751	.	-	.	ID=gene3188;Name=YPD4_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15985;old_locus_tag=YPD4_2717
NC_017154.1	Protein Homology	CDS	3452378	3453751	.	-	0	ID=cds3133;Parent=gene3188;Dbxref=Genbank:WP_002208588.1;Name=WP_002208588.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002208588.1;transl_table=11
NC_017154.1	RefSeq	gene	3453756	3454499	.	-	.	ID=gene3189;Name=YPD4_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS15990;old_locus_tag=YPD4_2718
NC_017154.1	Protein Homology	CDS	3453756	3454499	.	-	0	ID=cds3134;Parent=gene3189;Dbxref=Genbank:WP_002208589.1;Name=WP_002208589.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002208589.1;transl_table=11
NC_017154.1	RefSeq	gene	3454502	3455908	.	-	.	ID=gene3190;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=YPD4_RS15995;old_locus_tag=YPD4_2719
NC_017154.1	Protein Homology	CDS	3454502	3455908	.	-	0	ID=cds3135;Parent=gene3190;Dbxref=Genbank:WP_002208590.1;Name=WP_002208590.1;Note=capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate;gbkey=CDS;gene=cpsB;product=mannose-1-phosphate guanyltransferase;protein_id=WP_002208590.1;transl_table=11
NC_017154.1	RefSeq	gene	3456144	3457109	.	-	.	ID=gene3191;Name=YPD4_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16000;old_locus_tag=YPD4_2720
NC_017154.1	Protein Homology	CDS	3456144	3457109	.	-	0	ID=cds3136;Parent=gene3191;Dbxref=Genbank:WP_002223297.1;Name=WP_002223297.1;Note=bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose;gbkey=CDS;product=GDP-fucose synthetase;protein_id=WP_002223297.1;transl_table=11
NC_017154.1	RefSeq	gene	3457115	3458237	.	-	.	ID=gene3192;Name=YPD4_RS16005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS16005;pseudo=true
NC_017154.1	Protein Homology	CDS	3457115	3458237	.	-	0	ID=cds3137;Parent=gene3192;Note=catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3458253	3459266	.	-	.	ID=gene3193;Name=YPD4_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16010;old_locus_tag=YPD4_2723
NC_017154.1	Protein Homology	CDS	3458253	3459266	.	-	0	ID=cds3138;Parent=gene3193;Dbxref=Genbank:WP_002208591.1;Name=WP_002208591.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208591.1;transl_table=11
NC_017154.1	RefSeq	gene	3459515	3460411	.	-	.	ID=gene3194;Name=YPD4_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16015;old_locus_tag=YPD4_2724
NC_017154.1	Protein Homology	CDS	3459515	3460411	.	-	0	ID=cds3139;Parent=gene3194;Dbxref=Genbank:WP_002354669.1;Name=WP_002354669.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002354669.1;transl_table=11
NC_017154.1	RefSeq	gene	3460733	3461875	.	-	.	ID=gene3195;Name=YPD4_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16020;old_locus_tag=YPD4_2725
NC_017154.1	Protein Homology	CDS	3460733	3461875	.	-	0	ID=cds3140;Parent=gene3195;Dbxref=Genbank:WP_002208592.1;Name=WP_002208592.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208592.1;transl_table=11
NC_017154.1	RefSeq	gene	3462255	3462968	.	-	.	ID=gene3196;Name=YPD4_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16025;old_locus_tag=YPD4_2726
NC_017154.1	Protein Homology	CDS	3462255	3462968	.	-	0	ID=cds3141;Parent=gene3196;Dbxref=Genbank:WP_002215988.1;Name=WP_002215988.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002215988.1;transl_table=11
NC_017154.1	RefSeq	gene	3462979	3464322	.	-	.	ID=gene3197;Name=YPD4_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16030;old_locus_tag=YPD4_2727
NC_017154.1	Protein Homology	CDS	3462979	3464322	.	-	0	ID=cds3142;Parent=gene3197;Dbxref=Genbank:WP_002208593.1;Name=WP_002208593.1;gbkey=CDS;product=O-unit flippase Wzx;protein_id=WP_002208593.1;transl_table=11
NC_017154.1	RefSeq	gene	3464396	3465679	.	-	.	ID=gene3198;Name=YPD4_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16035;old_locus_tag=YPD4_2728
NC_017154.1	Protein Homology	CDS	3464396	3465679	.	-	0	ID=cds3143;Parent=gene3198;Dbxref=Genbank:WP_002208594.1;Name=WP_002208594.1;gbkey=CDS;product=O-antigen synthesis protein WbyH;protein_id=WP_002208594.1;transl_table=11
NC_017154.1	RefSeq	gene	3465680	3466537	.	-	.	ID=gene3199;Name=YPD4_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16040;old_locus_tag=YPD4_2729
NC_017154.1	Protein Homology	CDS	3465680	3466537	.	-	0	ID=cds3144;Parent=gene3199;Dbxref=Genbank:WP_002208595.1;Name=WP_002208595.1;gbkey=CDS;product=paratose synthase;protein_id=WP_002208595.1;transl_table=11
NC_017154.1	RefSeq	gene	3466574	3467887	.	-	.	ID=gene3200;Name=YPD4_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16045;old_locus_tag=YPD4_2730
NC_017154.1	Protein Homology	CDS	3466574	3467887	.	-	0	ID=cds3145;Parent=gene3200;Dbxref=Genbank:WP_002208596.1;Name=WP_002208596.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208596.1;transl_table=11
NC_017154.1	RefSeq	gene	3467905	3468804	.	-	.	ID=gene3201;Name=YPD4_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16050;old_locus_tag=YPD4_2731
NC_017154.1	Protein Homology	CDS	3467905	3468804	.	-	0	ID=cds3146;Parent=gene3201;Dbxref=Genbank:WP_002354671.1;Name=WP_002354671.1;gbkey=CDS;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_002354671.1;transl_table=11
NC_017154.1	RefSeq	gene	3468836	3468979	.	-	.	ID=gene3202;Name=YPD4_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16055
NC_017154.1	Protein Homology	CDS	3468836	3468979	.	-	0	ID=cds3147;Parent=gene3202;Dbxref=Genbank:WP_002215986.1;Name=WP_002215986.1;gbkey=CDS;product=CDP-glycerol glycerophosphotransferase;protein_id=WP_002215986.1;transl_table=11
NC_017154.1	RefSeq	gene	3468984	3469757	.	-	.	ID=gene3203;Name=YPD4_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16060;old_locus_tag=YPD4_2732
NC_017154.1	Protein Homology	CDS	3468984	3469757	.	-	0	ID=cds3148;Parent=gene3203;Dbxref=Genbank:WP_002208597.1;Name=WP_002208597.1;gbkey=CDS;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11
NC_017154.1	RefSeq	gene	3469795	3470784	.	-	.	ID=gene3204;Name=YPD4_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16065;old_locus_tag=YPD4_2733
NC_017154.1	Protein Homology	CDS	3469795	3470784	.	-	0	ID=cds3149;Parent=gene3204;Dbxref=Genbank:WP_002208598.1;Name=WP_002208598.1;gbkey=CDS;product=CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase;protein_id=WP_002208598.1;transl_table=11
NC_017154.1	RefSeq	gene	3471382	3472344	.	-	.	ID=gene3205;Name=YPD4_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16070;old_locus_tag=YPD4_2734
NC_017154.1	Protein Homology	CDS	3471382	3472344	.	-	0	ID=cds3150;Parent=gene3205;Dbxref=Genbank:WP_002208599.1;Name=WP_002208599.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11
NC_017154.1	RefSeq	gene	3472434	3473078	.	-	.	ID=gene3206;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=YPD4_RS16075;old_locus_tag=YPD4_2735
NC_017154.1	Protein Homology	CDS	3472434	3473078	.	-	0	ID=cds3151;Parent=gene3206;Dbxref=Genbank:WP_002208600.1;Name=WP_002208600.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11
NC_017154.1	RefSeq	gene	3473305	3475179	.	-	.	ID=gene3207;Name=YPD4_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16080;old_locus_tag=YPD4_2736
NC_017154.1	Protein Homology	CDS	3473305	3475179	.	-	0	ID=cds3152;Parent=gene3207;Dbxref=Genbank:WP_002208601.1;Name=WP_002208601.1;Note=molecular chaperone;gbkey=CDS;product=chaperone protein HtpG;protein_id=WP_002208601.1;transl_table=11
NC_017154.1	RefSeq	gene	3475371	3475976	.	-	.	ID=gene3208;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=YPD4_RS16085;old_locus_tag=YPD4_2737
NC_017154.1	Protein Homology	CDS	3475371	3475976	.	-	0	ID=cds3153;Parent=gene3208;Dbxref=Genbank:WP_002208603.1;Name=WP_002208603.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_002208603.1;transl_table=11
NC_017154.1	RefSeq	gene	3475976	3476308	.	-	.	ID=gene3209;Name=YPD4_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16090;old_locus_tag=YPD4_2738
NC_017154.1	Protein Homology	CDS	3475976	3476308	.	-	0	ID=cds3154;Parent=gene3209;Dbxref=Genbank:WP_002208604.1;Name=WP_002208604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208604.1;transl_table=11
NC_017154.1	RefSeq	gene	3476364	3478340	.	-	.	ID=gene3210;Name=YPD4_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16095;old_locus_tag=YPD4_2739
NC_017154.1	Protein Homology	CDS	3476364	3478340	.	-	0	ID=cds3155;Parent=gene3210;Dbxref=Genbank:WP_002208605.1;Name=WP_002208605.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit gamma/tau;protein_id=WP_002208605.1;transl_table=11
NC_017154.1	RefSeq	gene	3478996	3479559	.	-	.	ID=gene3211;Name=YPD4_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16100;old_locus_tag=YPD4_2740
NC_017154.1	Protein Homology	CDS	3478996	3479559	.	-	0	ID=cds3156;Parent=gene3211;Dbxref=Genbank:WP_002208606.1;Name=WP_002208606.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_002208606.1;transl_table=11
NC_017154.1	RefSeq	gene	3479992	3480180	.	+	.	ID=gene3212;Name=YPD4_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16105
NC_017154.1	Protein Homology	CDS	3479992	3480180	.	+	0	ID=cds3157;Parent=gene3212;Dbxref=Genbank:WP_002208609.1;Name=WP_002208609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208609.1;transl_table=11
NC_017154.1	RefSeq	gene	3480379	3480915	.	+	.	ID=gene3213;Name=YPD4_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16110;old_locus_tag=YPD4_2741
NC_017154.1	Protein Homology	CDS	3480379	3480915	.	+	0	ID=cds3158;Parent=gene3213;Dbxref=Genbank:WP_002208610.1;Name=WP_002208610.1;gbkey=CDS;product=prephenate dehydrogenase;protein_id=WP_002208610.1;transl_table=11
NC_017154.1	RefSeq	gene	3481086	3481241	.	+	.	ID=gene3214;Name=YPD4_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16115
NC_017154.1	Protein Homology	CDS	3481086	3481241	.	+	0	ID=cds3159;Parent=gene3214;Dbxref=Genbank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208611.1;transl_table=11
NC_017154.1	RefSeq	gene	3481581	3484982	.	-	.	ID=gene3215;Name=YPD4_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16120;old_locus_tag=YPD4_2742
NC_017154.1	Protein Homology	CDS	3481581	3484982	.	-	0	ID=cds3160;Parent=gene3215;Dbxref=Genbank:WP_042659387.1;Name=WP_042659387.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_042659387.1;transl_table=11
NC_017154.1	RefSeq	gene	3485247	3485600	.	-	.	ID=gene3216;Name=YPD4_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16125;old_locus_tag=YPD4_2743
NC_017154.1	Protein Homology	CDS	3485247	3485600	.	-	0	ID=cds3161;Parent=gene3216;Dbxref=Genbank:WP_002208613.1;Name=WP_002208613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208613.1;transl_table=11
NC_017154.1	RefSeq	gene	3485613	3486269	.	-	.	ID=gene3217;Name=YPD4_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16130;old_locus_tag=YPD4_2744
NC_017154.1	Protein Homology	CDS	3485613	3486269	.	-	0	ID=cds3162;Parent=gene3217;Dbxref=Genbank:WP_002208614.1;Name=WP_002208614.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208614.1;transl_table=11
NC_017154.1	RefSeq	gene	3486414	3487601	.	+	.	ID=gene3218;Name=YPD4_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16135;old_locus_tag=YPD4_2745
NC_017154.1	Protein Homology	CDS	3486414	3487601	.	+	0	ID=cds3163;Parent=gene3218;Dbxref=Genbank:WP_002208615.1;Name=WP_002208615.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=multidrug transporter;protein_id=WP_002208615.1;transl_table=11
NC_017154.1	RefSeq	gene	3487618	3490769	.	+	.	ID=gene3219;Name=YPD4_RS16140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS16140;old_locus_tag=YPD4_2747;pseudo=true
NC_017154.1	Protein Homology	CDS	3487618	3490769	.	+	0	ID=cds3164;Parent=gene3219;exception=annotated by transcript or proteomic data;gbkey=CDS;product=multidrug transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3490955	3491215	.	+	.	ID=gene3220;Name=YPD4_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16145
NC_017154.1	Protein Homology	CDS	3490955	3491215	.	+	0	ID=cds3165;Parent=gene3220;Dbxref=Genbank:WP_002208617.1;Name=WP_002208617.1;gbkey=CDS;product=50S ribosomal protein L31 type B;protein_id=WP_002208617.1;transl_table=11
NC_017154.1	RefSeq	gene	3491231	3491374	.	+	.	ID=gene3221;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=YPD4_RS16150
NC_017154.1	Protein Homology	CDS	3491231	3491374	.	+	0	ID=cds3166;Parent=gene3221;Dbxref=Genbank:WP_002208618.1;Name=WP_002208618.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=WP_002208618.1;transl_table=11
NC_017154.1	RefSeq	gene	3492248	3492601	.	+	.	ID=gene3222;Name=YPD4_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16155;old_locus_tag=YPD4_2748
NC_017154.1	Protein Homology	CDS	3492248	3492601	.	+	0	ID=cds3167;Parent=gene3222;Dbxref=Genbank:WP_002208619.1;Name=WP_002208619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208619.1;transl_table=11
NC_017154.1	RefSeq	gene	3492760	3493128	.	+	.	ID=gene3223;Name=YPD4_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16160;old_locus_tag=YPD4_2749
NC_017154.1	Protein Homology	CDS	3492760	3493128	.	+	0	ID=cds3168;Parent=gene3223;Dbxref=Genbank:WP_002218472.1;Name=WP_002218472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218472.1;transl_table=11
NC_017154.1	RefSeq	gene	3493177	3493380	.	+	.	ID=gene3224;Name=YPD4_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16165
NC_017154.1	Protein Homology	CDS	3493177	3493380	.	+	0	ID=cds3169;Parent=gene3224;Dbxref=Genbank:WP_002208622.1;Name=WP_002208622.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11
NC_017154.1	RefSeq	gene	3494268	3494657	.	+	.	ID=gene3225;Name=YPD4_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16170;old_locus_tag=YPD4_2750
NC_017154.1	Protein Homology	CDS	3494268	3494657	.	+	0	ID=cds3170;Parent=gene3225;Dbxref=Genbank:WP_002208623.1;Name=WP_002208623.1;gbkey=CDS;product=6-O-methylguanine DNA methyltransferase;protein_id=WP_002208623.1;transl_table=11
NC_017154.1	RefSeq	gene	3494793	3495314	.	-	.	ID=gene3226;Name=YPD4_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16175;old_locus_tag=YPD4_2751
NC_017154.1	Protein Homology	CDS	3494793	3495314	.	-	0	ID=cds3171;Parent=gene3226;Dbxref=Genbank:WP_002208624.1;Name=WP_002208624.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002208624.1;transl_table=11
NC_017154.1	RefSeq	gene	3495571	3496431	.	+	.	ID=gene3227;Name=YPD4_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16180;old_locus_tag=YPD4_2752
NC_017154.1	Protein Homology	CDS	3495571	3496431	.	+	0	ID=cds3172;Parent=gene3227;Dbxref=Genbank:WP_002208625.1;Name=WP_002208625.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_002208625.1;transl_table=11
NC_017154.1	RefSeq	gene	3496691	3497980	.	-	.	ID=gene3228;Name=YPD4_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16185;old_locus_tag=YPD4_2753
NC_017154.1	Protein Homology	CDS	3496691	3497980	.	-	0	ID=cds3173;Parent=gene3228;Dbxref=Genbank:WP_002228344.1;Name=WP_002228344.1;gbkey=CDS;product=ammonium transporter;protein_id=WP_002228344.1;transl_table=11
NC_017154.1	RefSeq	gene	3498020	3498358	.	-	.	ID=gene3229;Name=YPD4_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16190;old_locus_tag=YPD4_2754
NC_017154.1	Protein Homology	CDS	3498020	3498358	.	-	0	ID=cds3174;Parent=gene3229;Dbxref=Genbank:WP_002208627.1;Name=WP_002208627.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 2;protein_id=WP_002208627.1;transl_table=11
NC_017154.1	RefSeq	gene	3498768	3500591	.	-	.	ID=gene3230;Name=YPD4_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16195;old_locus_tag=YPD4_2755
NC_017154.1	Protein Homology	CDS	3498768	3500591	.	-	0	ID=cds3175;Parent=gene3230;Dbxref=Genbank:WP_002208628.1;Name=WP_002208628.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208628.1;transl_table=11
NC_017154.1	RefSeq	gene	3500584	3502350	.	-	.	ID=gene3231;Name=YPD4_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16200;old_locus_tag=YPD4_2756
NC_017154.1	Protein Homology	CDS	3500584	3502350	.	-	0	ID=cds3176;Parent=gene3231;Dbxref=Genbank:WP_002208629.1;Name=WP_002208629.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208629.1;transl_table=11
NC_017154.1	RefSeq	gene	3502452	3502913	.	-	.	ID=gene3232;Name=YPD4_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16205;old_locus_tag=YPD4_2757
NC_017154.1	Protein Homology	CDS	3502452	3502913	.	-	0	ID=cds3177;Parent=gene3232;Dbxref=Genbank:WP_002208630.1;Name=WP_002208630.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11
NC_017154.1	RefSeq	gene	3503039	3504079	.	+	.	ID=gene3233;Name=YPD4_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16210;old_locus_tag=YPD4_2758
NC_017154.1	Protein Homology	CDS	3503039	3504079	.	+	0	ID=cds3178;Parent=gene3233;Dbxref=Genbank:WP_002208631.1;Name=WP_002208631.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_002208631.1;transl_table=11
NC_017154.1	RefSeq	gene	3504291	3505112	.	-	.	ID=gene3234;Name=YPD4_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16215;old_locus_tag=YPD4_2759
NC_017154.1	Protein Homology	CDS	3504291	3505112	.	-	0	ID=cds3179;Parent=gene3234;Dbxref=Genbank:WP_002208632.1;Name=WP_002208632.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;product=HMP-PP phosphatase;protein_id=WP_002208632.1;transl_table=11
NC_017154.1	RefSeq	gene	3505217	3506920	.	+	.	ID=gene3235;Name=YPD4_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16220;old_locus_tag=YPD4_2760
NC_017154.1	Protein Homology	CDS	3505217	3506920	.	+	0	ID=cds3180;Parent=gene3235;Dbxref=Genbank:WP_002208633.1;Name=WP_002208633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208633.1;transl_table=11
NC_017154.1	RefSeq	gene	3507185	3507883	.	+	.	ID=gene3236;Name=YPD4_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16225;old_locus_tag=YPD4_2761
NC_017154.1	Protein Homology	CDS	3507185	3507883	.	+	0	ID=cds3181;Parent=gene3236;Dbxref=Genbank:WP_002208635.1;Name=WP_002208635.1;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=7-cyano-7-deazaguanine synthase;protein_id=WP_002208635.1;transl_table=11
NC_017154.1	RefSeq	gene	3507969	3508376	.	-	.	ID=gene3237;Name=YPD4_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16230;old_locus_tag=YPD4_2762
NC_017154.1	Protein Homology	CDS	3507969	3508376	.	-	0	ID=cds3182;Parent=gene3237;Dbxref=Genbank:WP_002208636.1;Name=WP_002208636.1;gbkey=CDS;product=thioesterase;protein_id=WP_002208636.1;transl_table=11
NC_017154.1	RefSeq	gene	3508730	3509176	.	-	.	ID=gene3238;Name=YPD4_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16235;old_locus_tag=YPD4_2763
NC_017154.1	Protein Homology	CDS	3508730	3509176	.	-	0	ID=cds3183;Parent=gene3238;Dbxref=Genbank:WP_002208637.1;Name=WP_002208637.1;gbkey=CDS;product=transporter;protein_id=WP_002208637.1;transl_table=11
NC_017154.1	RefSeq	gene	3509316	3511202	.	-	.	ID=gene3239;Name=YPD4_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16240;old_locus_tag=YPD4_2764
NC_017154.1	Protein Homology	CDS	3509316	3511202	.	-	0	ID=cds3184;Parent=gene3239;Dbxref=Genbank:WP_002208638.1;Name=WP_002208638.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208638.1;transl_table=11
NC_017154.1	RefSeq	gene	3511503	3511775	.	-	.	ID=gene3240;Name=YPD4_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16245
NC_017154.1	Protein Homology	CDS	3511503	3511775	.	-	0	ID=cds3185;Parent=gene3240;Dbxref=Genbank:WP_002208639.1;Name=WP_002208639.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208639.1;transl_table=11
NC_017154.1	RefSeq	gene	3511993	3514346	.	-	.	ID=gene3241;Name=YPD4_RS16250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS16250;old_locus_tag=YPD4_2766;pseudo=true
NC_017154.1	Protein Homology	CDS	3511993	3514346	.	-	0	ID=cds3186;Parent=gene3241;exception=annotated by transcript or proteomic data;gbkey=CDS;product=DNA-binding protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3514541	3515812	.	-	.	ID=gene3242;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=YPD4_RS16255;old_locus_tag=YPD4_2767
NC_017154.1	Protein Homology	CDS	3514541	3515812	.	-	0	ID=cds3187;Parent=gene3242;Dbxref=Genbank:WP_002208641.1;Name=WP_002208641.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11
NC_017154.1	RefSeq	gene	3516018	3516641	.	-	.	ID=gene3243;Name=YPD4_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16260;old_locus_tag=YPD4_2768
NC_017154.1	Protein Homology	CDS	3516018	3516641	.	-	0	ID=cds3188;Parent=gene3243;Dbxref=Genbank:WP_002208642.1;Name=WP_002208642.1;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_002208642.1;transl_table=11
NC_017154.1	RefSeq	gene	3517103	3518407	.	-	.	ID=gene3244;Name=YPD4_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16265;old_locus_tag=YPD4_2769
NC_017154.1	Protein Homology	CDS	3517103	3518407	.	-	0	ID=cds3189;Parent=gene3244;Dbxref=Genbank:WP_015684004.1;Name=WP_015684004.1;gbkey=CDS;product=trigger factor;protein_id=WP_015684004.1;transl_table=11
NC_017154.1	RefSeq	gene	3518480	3518665	.	-	.	ID=gene3245;Name=YPD4_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16270
NC_017154.1	Protein Homology	CDS	3518480	3518665	.	-	0	ID=cds3190;Parent=gene3245;Dbxref=Genbank:WP_012304506.1;Name=WP_012304506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304506.1;transl_table=11
NC_017154.1	RefSeq	gene	3518824	3519138	.	-	.	ID=gene3246;Name=YPD4_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16275;old_locus_tag=YPD4_2770
NC_017154.1	Protein Homology	CDS	3518824	3519138	.	-	0	ID=cds3191;Parent=gene3246;Dbxref=Genbank:WP_002354680.1;Name=WP_002354680.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=BolA family transcriptional regulator;protein_id=WP_002354680.1;transl_table=11
NC_017154.1	RefSeq	gene	3519493	3520071	.	+	.	ID=gene3247;Name=YPD4_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16280;old_locus_tag=YPD4_2771
NC_017154.1	Protein Homology	CDS	3519493	3520071	.	+	0	ID=cds3192;Parent=gene3247;Dbxref=Genbank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208646.1;transl_table=11
NC_017154.1	RefSeq	gene	3520189	3521667	.	+	.	ID=gene3248;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=YPD4_RS16285;old_locus_tag=YPD4_2772
NC_017154.1	Protein Homology	CDS	3520189	3521667	.	+	0	ID=cds3193;Parent=gene3248;Dbxref=Genbank:WP_002223277.1;Name=WP_002223277.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=AmpG family muropeptide MFS transporter;protein_id=WP_002223277.1;transl_table=11
NC_017154.1	RefSeq	gene	3521959	3522726	.	+	.	ID=gene3249;Name=YPD4_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16290;old_locus_tag=YPD4_2773
NC_017154.1	Protein Homology	CDS	3521959	3522726	.	+	0	ID=cds3194;Parent=gene3249;Dbxref=Genbank:WP_002208648.1;Name=WP_002208648.1;gbkey=CDS;product=ion channel protein Tsx;protein_id=WP_002208648.1;transl_table=11
NC_017154.1	RefSeq	gene	3523096	3524052	.	+	.	ID=gene3250;Name=YPD4_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16295;old_locus_tag=YPD4_2774
NC_017154.1	Protein Homology	CDS	3523096	3524052	.	+	0	ID=cds3195;Parent=gene3250;Dbxref=Genbank:WP_002208649.1;Name=WP_002208649.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208649.1;transl_table=11
NC_017154.1	RefSeq	gene	3524057	3526048	.	+	.	ID=gene3251;Name=YPD4_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16300;old_locus_tag=YPD4_2775
NC_017154.1	Protein Homology	CDS	3524057	3526048	.	+	0	ID=cds3196;Parent=gene3251;Dbxref=Genbank:WP_002208650.1;Name=WP_002208650.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit I;protein_id=WP_002208650.1;transl_table=11
NC_017154.1	RefSeq	gene	3526038	3526652	.	+	.	ID=gene3252;Name=YPD4_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16305
NC_017154.1	Protein Homology	CDS	3526038	3526652	.	+	0	ID=cds3197;Parent=gene3252;Dbxref=Genbank:WP_002208651.1;Name=WP_002208651.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208651.1;transl_table=11
NC_017154.1	RefSeq	gene	3526652	3526984	.	+	.	ID=gene3253;Name=YPD4_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16310;old_locus_tag=YPD4_2777
NC_017154.1	Protein Homology	CDS	3526652	3526984	.	+	0	ID=cds3198;Parent=gene3253;Dbxref=Genbank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208652.1;transl_table=11
NC_017154.1	RefSeq	gene	3526998	3527885	.	+	.	ID=gene3254;Name=YPD4_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16315;old_locus_tag=YPD4_2778
NC_017154.1	Protein Homology	CDS	3526998	3527885	.	+	0	ID=cds3199;Parent=gene3254;Dbxref=Genbank:WP_002208653.1;Name=WP_002208653.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_002208653.1;transl_table=11
NC_017154.1	RefSeq	gene	3528369	3529733	.	+	.	ID=gene3255;Name=YPD4_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16320;old_locus_tag=YPD4_2779
NC_017154.1	Protein Homology	CDS	3528369	3529733	.	+	0	ID=cds3200;Parent=gene3255;Dbxref=Genbank:WP_002216717.1;Name=WP_002216717.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216717.1;transl_table=11
NC_017154.1	RefSeq	gene	3529857	3530348	.	-	.	ID=gene3256;Name=YPD4_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16325;old_locus_tag=YPD4_2780
NC_017154.1	Protein Homology	CDS	3529857	3530348	.	-	0	ID=cds3201;Parent=gene3256;Dbxref=Genbank:WP_002208655.1;Name=WP_002208655.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;product=nucleotide-binding protein;protein_id=WP_002208655.1;transl_table=11
NC_017154.1	RefSeq	gene	3530580	3531491	.	+	.	ID=gene3257;Name=YPD4_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16330
NC_017154.1	Protein Homology	CDS	3530580	3531491	.	+	0	ID=cds3202;Parent=gene3257;Dbxref=Genbank:WP_002208656.1;Name=WP_002208656.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_002208656.1;transl_table=11
NC_017154.1	RefSeq	gene	3531454	3532044	.	+	.	ID=gene3258;Name=YPD4_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16335;old_locus_tag=YPD4_2782
NC_017154.1	Protein Homology	CDS	3531454	3532044	.	+	0	ID=cds3203;Parent=gene3258;Dbxref=Genbank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;product=oxidative-stress-resistance chaperone;protein_id=WP_002208657.1;transl_table=11
NC_017154.1	RefSeq	gene	3532112	3533563	.	-	.	ID=gene3259;Name=YPD4_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16340;old_locus_tag=YPD4_2783
NC_017154.1	Protein Homology	CDS	3532112	3533563	.	-	0	ID=cds3204;Parent=gene3259;Dbxref=Genbank:WP_002208658.1;Name=WP_002208658.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA sulfurtransferase;protein_id=WP_002208658.1;transl_table=11
NC_017154.1	RefSeq	gene	3533661	3533831	.	-	.	ID=gene3260;Name=YPD4_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16345
NC_017154.1	Protein Homology	CDS	3533661	3533831	.	-	0	ID=cds3205;Parent=gene3260;Dbxref=Genbank:WP_002208659.1;Name=WP_002208659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208659.1;transl_table=11
NC_017154.1	RefSeq	gene	3533913	3534167	.	+	.	ID=gene3261;Name=YPD4_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16350
NC_017154.1	Protein Homology	CDS	3533913	3534167	.	+	0	ID=cds3206;Parent=gene3261;Dbxref=Genbank:WP_002208660.1;Name=WP_002208660.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease 7 small subunit;protein_id=WP_002208660.1;transl_table=11
NC_017154.1	RefSeq	gene	3534172	3535092	.	+	.	ID=gene3262;Name=YPD4_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16355;old_locus_tag=YPD4_2784
NC_017154.1	Protein Homology	CDS	3534172	3535092	.	+	0	ID=cds3207;Parent=gene3262;Dbxref=Genbank:WP_002208661.1;Name=WP_002208661.1;gbkey=CDS;product=geranyltranstransferase;protein_id=WP_002208661.1;transl_table=11
NC_017154.1	RefSeq	gene	3535248	3537107	.	+	.	ID=gene3263;Name=YPD4_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16360;old_locus_tag=YPD4_2785
NC_017154.1	Protein Homology	CDS	3535248	3537107	.	+	0	ID=cds3208;Parent=gene3263;Dbxref=Genbank:WP_002208662.1;Name=WP_002208662.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_002208662.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3537174	3537896	.	+	.	ID=id262;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3537286	3537744	.	-	.	ID=gene3264;Name=YPD4_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16365;old_locus_tag=YPD4_2786
NC_017154.1	Protein Homology	CDS	3537286	3537744	.	-	0	ID=cds3209;Parent=gene3264;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	3537734	3537898	.	-	.	ID=gene3265;Name=YPD4_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16370
NC_017154.1	Protein Homology	CDS	3537734	3537898	.	-	0	ID=cds3210;Parent=gene3265;Dbxref=Genbank:WP_002217353.1;Name=WP_002217353.1;gbkey=CDS;product=invasin;protein_id=WP_002217353.1;transl_table=11
NC_017154.1	RefSeq	gene	3537958	3538443	.	-	.	ID=gene3266;Name=YPD4_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16375;old_locus_tag=YPD4_2787
NC_017154.1	Protein Homology	CDS	3537958	3538443	.	-	0	ID=cds3211;Parent=gene3266;Dbxref=Genbank:WP_002208663.1;Name=WP_002208663.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=WP_002208663.1;transl_table=11
NC_017154.1	RefSeq	gene	3538436	3539425	.	-	.	ID=gene3267;Name=YPD4_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16380;old_locus_tag=YPD4_2788
NC_017154.1	Protein Homology	CDS	3538436	3539425	.	-	0	ID=cds3212;Parent=gene3267;Dbxref=Genbank:WP_002208664.1;Name=WP_002208664.1;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=WP_002208664.1;transl_table=11
NC_017154.1	RefSeq	gene	3539666	3540082	.	-	.	ID=gene3268;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=YPD4_RS16385;old_locus_tag=YPD4_2789
NC_017154.1	Protein Homology	CDS	3539666	3540082	.	-	0	ID=cds3213;Parent=gene3268;Dbxref=Genbank:WP_002208665.1;Name=WP_002208665.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=N utilization substance protein B homolog;protein_id=WP_002208665.1;transl_table=11
NC_017154.1	RefSeq	gene	3540103	3540573	.	-	.	ID=gene3269;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=YPD4_RS16390;old_locus_tag=YPD4_2790
NC_017154.1	Protein Homology	CDS	3540103	3540573	.	-	0	ID=cds3214;Parent=gene3269;Dbxref=Genbank:WP_002208666.1;Name=WP_002208666.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11
NC_017154.1	RefSeq	gene	3540709	3541818	.	-	.	ID=gene3270;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=YPD4_RS16395;old_locus_tag=YPD4_2791
NC_017154.1	Protein Homology	CDS	3540709	3541818	.	-	0	ID=cds3215;Parent=gene3270;Dbxref=Genbank:WP_002208667.1;Name=WP_002208667.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=diaminohydroxyphosphoribosylaminopyrimidine deaminase;protein_id=WP_002208667.1;transl_table=11
NC_017154.1	RefSeq	gene	3541968	3542417	.	-	.	ID=gene3271;Name=YPD4_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16400;old_locus_tag=YPD4_2792
NC_017154.1	Protein Homology	CDS	3541968	3542417	.	-	0	ID=cds3216;Parent=gene3271;Dbxref=Genbank:WP_002208668.1;Name=WP_002208668.1;gbkey=CDS;product=NrdR family transcriptional regulator;protein_id=WP_002208668.1;transl_table=11
NC_017154.1	RefSeq	gene	3542488	3543081	.	-	.	ID=gene3272;Name=YPD4_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16405;old_locus_tag=YPD4_2793
NC_017154.1	Protein Homology	CDS	3542488	3543081	.	-	0	ID=cds3217;Parent=gene3272;Dbxref=Genbank:WP_002217141.1;Name=WP_002217141.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217141.1;transl_table=11
NC_017154.1	RefSeq	gene	3543114	3543809	.	-	.	ID=gene3273;Name=YPD4_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16410;old_locus_tag=YPD4_2794
NC_017154.1	Protein Homology	CDS	3543114	3543809	.	-	0	ID=cds3218;Parent=gene3273;Dbxref=Genbank:WP_002217139.1;Name=WP_002217139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217139.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3543994	3544713	.	+	.	ID=id263;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3544107	3544352	.	-	.	ID=gene3274;Name=YPD4_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16415
NC_017154.1	Protein Homology	CDS	3544107	3544352	.	-	0	ID=cds3219;Parent=gene3274;Dbxref=Genbank:WP_002230125.1;Name=WP_002230125.1;gbkey=CDS;product=transposase;protein_id=WP_002230125.1;transl_table=11
NC_017154.1	RefSeq	gene	3544349	3544615	.	-	.	ID=gene3275;Name=YPD4_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16420
NC_017154.1	Protein Homology	CDS	3544349	3544615	.	-	0	ID=cds3220;Parent=gene3275;Dbxref=Genbank:WP_044023381.1;Name=WP_044023381.1;gbkey=CDS;product=transposase;protein_id=WP_044023381.1;transl_table=11
NC_017154.1	RefSeq	gene	3544771	3545739	.	-	.	ID=gene3276;Name=YPD4_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16425;old_locus_tag=YPD4_2795
NC_017154.1	Protein Homology	CDS	3544771	3545739	.	-	0	ID=cds3221;Parent=gene3276;Dbxref=Genbank:WP_002208669.1;Name=WP_002208669.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_002208669.1;transl_table=11
NC_017154.1	RefSeq	gene	3545750	3547564	.	-	.	ID=gene3277;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=YPD4_RS16430;old_locus_tag=YPD4_2796
NC_017154.1	Protein Homology	CDS	3545750	3547564	.	-	0	ID=cds3222;Parent=gene3277;Dbxref=Genbank:WP_002354695.1;Name=WP_002354695.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_002354695.1;transl_table=11
NC_017154.1	RefSeq	gene	3547625	3547960	.	-	.	ID=gene3278;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=YPD4_RS16435;old_locus_tag=YPD4_2797
NC_017154.1	Protein Homology	CDS	3547625	3547960	.	-	0	ID=cds3223;Parent=gene3278;Dbxref=Genbank:WP_002208671.1;Name=WP_002208671.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11
NC_017154.1	RefSeq	gene	3548072	3549196	.	-	.	ID=gene3279;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=YPD4_RS16440;old_locus_tag=YPD4_2798
NC_017154.1	Protein Homology	CDS	3548072	3549196	.	-	0	ID=cds3224;Parent=gene3279;Dbxref=Genbank:WP_015684005.1;Name=WP_015684005.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=WP_015684005.1;transl_table=11
NC_017154.1	RefSeq	gene	3549289	3550359	.	-	.	ID=gene3280;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=YPD4_RS16445;old_locus_tag=YPD4_2799
NC_017154.1	Protein Homology	CDS	3549289	3550359	.	-	0	ID=cds3225;Parent=gene3280;Dbxref=Genbank:WP_002208673.1;Name=WP_002208673.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_002208673.1;transl_table=11
NC_017154.1	RefSeq	gene	3550562	3551144	.	+	.	ID=gene3281;Name=YPD4_RS16450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS16450;old_locus_tag=YPD4_2800;pseudo=true
NC_017154.1	Protein Homology	CDS	3550562	3551144	.	+	0	ID=cds3226;Parent=gene3281;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ACP phosphodiesterase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3551443	3552045	.	+	.	ID=gene3282;Name=YPD4_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16455;old_locus_tag=YPD4_2801
NC_017154.1	Protein Homology	CDS	3551443	3552045	.	+	0	ID=cds3227;Parent=gene3282;Dbxref=Genbank:WP_002208675.1;Name=WP_002208675.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_002208675.1;transl_table=11
NC_017154.1	RefSeq	gene	3552134	3552265	.	-	.	ID=gene3283;Name=YPD4_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16460
NC_017154.1	Protein Homology	CDS	3552134	3552265	.	-	0	ID=cds3228;Parent=gene3283;Dbxref=Genbank:WP_002216930.1;Name=WP_002216930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216930.1;transl_table=11
NC_017154.1	RefSeq	gene	3552434	3552688	.	+	.	ID=gene3284;Name=YPD4_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16465
NC_017154.1	Protein Homology	CDS	3552434	3552688	.	+	0	ID=cds3229;Parent=gene3284;Dbxref=Genbank:WP_002216934.1;Name=WP_002216934.1;gbkey=CDS;product=gamma-glutamyltranspeptidase;protein_id=WP_002216934.1;transl_table=11
NC_017154.1	RefSeq	gene	3552685	3554199	.	+	.	ID=gene3285;Name=YPD4_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16470;old_locus_tag=YPD4_2802
NC_017154.1	Protein Homology	CDS	3552685	3554199	.	+	0	ID=cds3230;Parent=gene3285;Dbxref=Genbank:WP_002216937.1;Name=WP_002216937.1;gbkey=CDS;product=gamma-glutamyltransferase;protein_id=WP_002216937.1;transl_table=11
NC_017154.1	RefSeq	gene	3554407	3555087	.	-	.	ID=gene3286;Name=YPD4_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16475;old_locus_tag=YPD4_2803
NC_017154.1	Protein Homology	CDS	3554407	3555087	.	-	0	ID=cds3231;Parent=gene3286;Dbxref=Genbank:WP_002208677.1;Name=WP_002208677.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002208677.1;transl_table=11
NC_017154.1	RefSeq	gene	3555242	3557071	.	-	.	ID=gene3287;Name=YPD4_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16480;old_locus_tag=YPD4_2804
NC_017154.1	Protein Homology	CDS	3555242	3557071	.	-	0	ID=cds3232;Parent=gene3287;Dbxref=Genbank:WP_002208678.1;Name=WP_002208678.1;gbkey=CDS;product=maltodextrin glucosidase;protein_id=WP_002208678.1;transl_table=11
NC_017154.1	RefSeq	gene	3557632	3559023	.	-	.	ID=gene3288;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPD4_RS16485;old_locus_tag=YPD4_2805
NC_017154.1	Protein Homology	CDS	3557632	3559023	.	-	0	ID=cds3233;Parent=gene3288;Dbxref=Genbank:WP_002223269.1;Name=WP_002223269.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002223269.1;transl_table=11
NC_017154.1	RefSeq	gene	3559099	3560418	.	-	.	ID=gene3289;Name=YPD4_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16490;old_locus_tag=YPD4_2806
NC_017154.1	Protein Homology	CDS	3559099	3560418	.	-	0	ID=cds3234;Parent=gene3289;Dbxref=Genbank:WP_002208680.1;Name=WP_002208680.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid transporter 2 carrier protein BrnQ;protein_id=WP_002208680.1;transl_table=11
NC_017154.1	RefSeq	gene	3560892	3561956	.	-	.	ID=gene3290;Name=YPD4_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16495;old_locus_tag=YPD4_2807
NC_017154.1	Protein Homology	CDS	3560892	3561956	.	-	0	ID=cds3235;Parent=gene3290;Dbxref=Genbank:WP_002215524.1;Name=WP_002215524.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215524.1;transl_table=11
NC_017154.1	RefSeq	gene	3561978	3563294	.	-	.	ID=gene3291;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=YPD4_RS16500;old_locus_tag=YPD4_2808
NC_017154.1	Protein Homology	CDS	3561978	3563294	.	-	0	ID=cds3236;Parent=gene3291;Dbxref=Genbank:WP_002208684.1;Name=WP_002208684.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein;protein_id=WP_002208684.1;transl_table=11
NC_017154.1	RefSeq	gene	3563319	3564008	.	-	.	ID=gene3292;Name=YPD4_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16505;old_locus_tag=YPD4_2809
NC_017154.1	Protein Homology	CDS	3563319	3564008	.	-	0	ID=cds3237;Parent=gene3292;Dbxref=Genbank:WP_002208685.1;Name=WP_002208685.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208685.1;transl_table=11
NC_017154.1	RefSeq	gene	3564038	3564157	.	-	.	ID=gene3293;Name=YPD4_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16510
NC_017154.1	Protein Homology	CDS	3564038	3564157	.	-	0	ID=cds3238;Parent=gene3293;Dbxref=Genbank:WP_002208686.1;Name=WP_002208686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208686.1;transl_table=11
NC_017154.1	RefSeq	gene	3564276	3565520	.	+	.	ID=gene3294;Name=YPD4_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16515;old_locus_tag=YPD4_2810
NC_017154.1	Protein Homology	CDS	3564276	3565520	.	+	0	ID=cds3239;Parent=gene3294;Dbxref=Genbank:WP_002208687.1;Name=WP_002208687.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=exonuclease SbcD;protein_id=WP_002208687.1;transl_table=11
NC_017154.1	RefSeq	gene	3565517	3569206	.	+	.	ID=gene3295;Name=YPD4_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16520;old_locus_tag=YPD4_2811
NC_017154.1	Protein Homology	CDS	3565517	3569206	.	+	0	ID=cds3240;Parent=gene3295;Dbxref=Genbank:WP_002223265.1;Name=WP_002223265.1;gbkey=CDS;product=ATP-dependent dsDNA exonuclease;protein_id=WP_002223265.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3569334	3569458	.	+	.	ID=id264;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	3569460	3569753	.	+	.	ID=id265;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3569808	3570722	.	-	.	ID=gene3296;Name=YPD4_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16525;old_locus_tag=YPD4_2812
NC_017154.1	Protein Homology	CDS	3569808	3570722	.	-	0	ID=cds3241;Parent=gene3296;Dbxref=Genbank:WP_002208690.1;Name=WP_002208690.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;product=fructokinase;protein_id=WP_002208690.1;transl_table=11
NC_017154.1	RefSeq	gene	3571055	3571966	.	+	.	ID=gene3297;Name=YPD4_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16530;old_locus_tag=YPD4_2813
NC_017154.1	Protein Homology	CDS	3571055	3571966	.	+	0	ID=cds3242;Parent=gene3297;Dbxref=Genbank:WP_002208691.1;Name=WP_002208691.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination-associated protein RdgC;protein_id=WP_002208691.1;transl_table=11
NC_017154.1	RefSeq	gene	3572202	3572489	.	-	.	ID=gene3298;Name=YPD4_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16535
NC_017154.1	Protein Homology	CDS	3572202	3572489	.	-	0	ID=cds3243;Parent=gene3298;Dbxref=Genbank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208692.1;transl_table=11
NC_017154.1	RefSeq	gene	3572553	3572723	.	-	.	ID=gene3299;Name=YPD4_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16540
NC_017154.1	Protein Homology	CDS	3572553	3572723	.	-	0	ID=cds3244;Parent=gene3299;Dbxref=Genbank:WP_002215533.1;Name=WP_002215533.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215533.1;transl_table=11
NC_017154.1	RefSeq	gene	3572979	3573503	.	-	.	ID=gene3300;Name=YPD4_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16545;old_locus_tag=YPD4_2814
NC_017154.1	Protein Homology	CDS	3572979	3573503	.	-	0	ID=cds3245;Parent=gene3300;Dbxref=Genbank:WP_002208693.1;Name=WP_002208693.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_002208693.1;transl_table=11
NC_017154.1	RefSeq	gene	3573750	3574307	.	-	.	ID=gene3301;Name=YPD4_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16550;old_locus_tag=YPD4_2815
NC_017154.1	Protein Homology	CDS	3573750	3574307	.	-	0	ID=cds3246;Parent=gene3301;Dbxref=Genbank:WP_002208694.1;Name=WP_002208694.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208694.1;transl_table=11
NC_017154.1	RefSeq	gene	3574575	3574790	.	+	.	ID=gene3302;Name=YPD4_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16555
NC_017154.1	Protein Homology	CDS	3574575	3574790	.	+	0	ID=cds3247;Parent=gene3302;Dbxref=Genbank:WP_002215536.1;Name=WP_002215536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215536.1;transl_table=11
NC_017154.1	RefSeq	gene	3575037	3575600	.	-	.	ID=gene3303;Name=YPD4_RS16560;end_range=3575600,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS16560;old_locus_tag=YPD4_2816;partial=true;pseudo=true
NC_017154.1	Protein Homology	CDS	3575037	3575600	.	-	0	ID=cds3248;Parent=gene3303;end_range=3575600,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3575804	3576058	.	-	.	ID=gene3304;Name=YPD4_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16565
NC_017154.1	Protein Homology	CDS	3575804	3576058	.	-	0	ID=cds3249;Parent=gene3304;Dbxref=Genbank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208698.1;transl_table=11
NC_017154.1	RefSeq	gene	3576256	3577005	.	-	.	ID=gene3305;Name=YPD4_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16570;old_locus_tag=YPD4_2817
NC_017154.1	Protein Homology	CDS	3576256	3577005	.	-	0	ID=cds3250;Parent=gene3305;Dbxref=Genbank:WP_002264519.1;Name=WP_002264519.1;gbkey=CDS;product=flagellar brake protein YcgR;protein_id=WP_002264519.1;transl_table=11
NC_017154.1	RefSeq	gene	3577342	3578601	.	-	.	ID=gene3306;Name=YPD4_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16575;old_locus_tag=YPD4_2818
NC_017154.1	Protein Homology	CDS	3577342	3578601	.	-	0	ID=cds3251;Parent=gene3306;Dbxref=Genbank:WP_002208700.1;Name=WP_002208700.1;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=WP_002208700.1;transl_table=11
NC_017154.1	RefSeq	gene	3578611	3579714	.	-	.	ID=gene3307;Name=YPD4_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16580;old_locus_tag=YPD4_2819
NC_017154.1	Protein Homology	CDS	3578611	3579714	.	-	0	ID=cds3252;Parent=gene3307;Dbxref=Genbank:WP_002208701.1;Name=WP_002208701.1;gbkey=CDS;product=glutamate 5-kinase;protein_id=WP_002208701.1;transl_table=11
NC_017154.1	RefSeq	gene	3579891	3580292	.	-	.	ID=gene3308;Name=YPD4_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16585;old_locus_tag=YPD4_2820
NC_017154.1	Protein Homology	CDS	3579891	3580292	.	-	0	ID=cds3253;Parent=gene3308;Dbxref=Genbank:WP_002208702.1;Name=WP_002208702.1;gbkey=CDS;product=sigma factor-binding protein Crl;protein_id=WP_002208702.1;transl_table=11
NC_017154.1	RefSeq	gene	3580352	3581599	.	-	.	ID=gene3309;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=YPD4_RS16590;old_locus_tag=YPD4_2821
NC_017154.1	Protein Homology	CDS	3580352	3581599	.	-	0	ID=cds3254;Parent=gene3309;Dbxref=Genbank:WP_002208703.1;Name=WP_002208703.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=WP_002208703.1;transl_table=11
NC_017154.1	RefSeq	gene	3581726	3582184	.	-	.	ID=gene3310;Name=YPD4_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16595;old_locus_tag=YPD4_2822
NC_017154.1	Protein Homology	CDS	3581726	3582184	.	-	0	ID=cds3255;Parent=gene3310;Dbxref=Genbank:WP_002208704.1;Name=WP_002208704.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11
NC_017154.1	RefSeq	gene	3582611	3582916	.	+	.	ID=gene3311;Name=YPD4_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16600
NC_017154.1	Protein Homology	CDS	3582611	3582916	.	+	0	ID=cds3256;Parent=gene3311;Dbxref=Genbank:WP_002216043.1;Name=WP_002216043.1;gbkey=CDS;product=holin;protein_id=WP_002216043.1;transl_table=11
NC_017154.1	RefSeq	gene	3583113	3584717	.	+	.	ID=gene3312;Name=YPD4_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16605;old_locus_tag=YPD4_2823
NC_017154.1	Protein Homology	CDS	3583113	3584717	.	+	0	ID=cds3257;Parent=gene3312;Dbxref=Genbank:WP_002208705.1;Name=WP_002208705.1;gbkey=CDS;product=chitin-binding domain protein;protein_id=WP_002208705.1;transl_table=11
NC_017154.1	RefSeq	gene	3585177	3585962	.	-	.	ID=gene3313;Name=YPD4_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16610;old_locus_tag=YPD4_2824
NC_017154.1	Protein Homology	CDS	3585177	3585962	.	-	0	ID=cds3258;Parent=gene3313;Dbxref=Genbank:WP_002208706.1;Name=WP_002208706.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208706.1;transl_table=11
NC_017154.1	RefSeq	gene	3586810	3586965	.	-	.	ID=gene3314;Name=YPD4_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16615
NC_017154.1	Protein Homology	CDS	3586810	3586965	.	-	0	ID=cds3259;Parent=gene3314;Dbxref=Genbank:WP_002216045.1;Name=WP_002216045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216045.1;transl_table=11
NC_017154.1	RefSeq	gene	3587963	3589423	.	+	.	ID=gene3315;Name=YPD4_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16620;old_locus_tag=YPD4_2825
NC_017154.1	Protein Homology	CDS	3587963	3589423	.	+	0	ID=cds3260;Parent=gene3315;Dbxref=Genbank:WP_002208707.1;Name=WP_002208707.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=WP_002208707.1;transl_table=11
NC_017154.1	RefSeq	gene	3589537	3590595	.	-	.	ID=gene3316;Name=YPD4_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16625;old_locus_tag=YPD4_2826
NC_017154.1	Protein Homology	CDS	3589537	3590595	.	-	0	ID=cds3261;Parent=gene3316;Dbxref=Genbank:WP_002208708.1;Name=WP_002208708.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;product=DNA polymerase IV;protein_id=WP_002208708.1;transl_table=11
NC_017154.1	RefSeq	gene	3590951	3591898	.	+	.	ID=gene3317;Name=YPD4_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16630;old_locus_tag=YPD4_2827
NC_017154.1	Protein Homology	CDS	3590951	3591898	.	+	0	ID=cds3262;Parent=gene3317;Dbxref=Genbank:WP_002208709.1;Name=WP_002208709.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002208709.1;transl_table=11
NC_017154.1	RefSeq	gene	3592142	3592369	.	-	.	ID=gene3318;Name=YPD4_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16635
NC_017154.1	Protein Homology	CDS	3592142	3592369	.	-	0	ID=cds3263;Parent=gene3318;Dbxref=Genbank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214684.1;transl_table=11
NC_017154.1	RefSeq	gene	3592382	3593377	.	-	.	ID=gene3319;Name=YPD4_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16640;old_locus_tag=YPD4_2828
NC_017154.1	Protein Homology	CDS	3592382	3593377	.	-	0	ID=cds3264;Parent=gene3319;Dbxref=Genbank:WP_002208710.1;Name=WP_002208710.1;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=WP_002208710.1;transl_table=11
NC_017154.1	RefSeq	gene	3593445	3594668	.	-	.	ID=gene3320;Name=YPD4_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16645;old_locus_tag=YPD4_2829
NC_017154.1	Protein Homology	CDS	3593445	3594668	.	-	0	ID=cds3265;Parent=gene3320;Dbxref=Genbank:WP_002208711.1;Name=WP_002208711.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit F;protein_id=WP_002208711.1;transl_table=11
NC_017154.1	RefSeq	gene	3594684	3595280	.	-	.	ID=gene3321;Name=YPD4_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16650;old_locus_tag=YPD4_2830
NC_017154.1	Protein Homology	CDS	3594684	3595280	.	-	0	ID=cds3266;Parent=gene3321;Dbxref=Genbank:WP_002208713.1;Name=WP_002208713.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002208713.1;transl_table=11
NC_017154.1	RefSeq	gene	3595287	3595916	.	-	.	ID=gene3322;Name=YPD4_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16655;old_locus_tag=YPD4_2831
NC_017154.1	Protein Homology	CDS	3595287	3595916	.	-	0	ID=cds3267;Parent=gene3322;Dbxref=Genbank:WP_002208714.1;Name=WP_002208714.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=NADH-quinone reductase subunit D;protein_id=WP_002208714.1;transl_table=11
NC_017154.1	RefSeq	gene	3595909	3596709	.	-	.	ID=gene3323;Name=YPD4_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16660;old_locus_tag=YPD4_2832
NC_017154.1	Protein Homology	CDS	3595909	3596709	.	-	0	ID=cds3268;Parent=gene3323;Dbxref=Genbank:WP_002208715.1;Name=WP_002208715.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=WP_002208715.1;transl_table=11
NC_017154.1	RefSeq	gene	3596699	3597940	.	-	.	ID=gene3324;Name=YPD4_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16665;old_locus_tag=YPD4_2833
NC_017154.1	Protein Homology	CDS	3596699	3597940	.	-	0	ID=cds3269;Parent=gene3324;Dbxref=Genbank:WP_002208716.1;Name=WP_002208716.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit B;protein_id=WP_002208716.1;transl_table=11
NC_017154.1	RefSeq	gene	3597944	3599287	.	-	.	ID=gene3325;Name=YPD4_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16670;old_locus_tag=YPD4_2834
NC_017154.1	Protein Homology	CDS	3597944	3599287	.	-	0	ID=cds3270;Parent=gene3325;Dbxref=Genbank:WP_002208717.1;Name=WP_002208717.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit A;protein_id=WP_002208717.1;transl_table=11
NC_017154.1	RefSeq	gene	3599783	3600523	.	+	.	ID=gene3326;Name=YPD4_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16675;old_locus_tag=YPD4_2835
NC_017154.1	Protein Homology	CDS	3599783	3600523	.	+	0	ID=cds3271;Parent=gene3326;Dbxref=Genbank:WP_002208718.1;Name=WP_002208718.1;gbkey=CDS;product=transpeptidase;protein_id=WP_002208718.1;transl_table=11
NC_017154.1	RefSeq	gene	3600488	3601261	.	-	.	ID=gene3327;Name=YPD4_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16680;old_locus_tag=YPD4_2836
NC_017154.1	Protein Homology	CDS	3600488	3601261	.	-	0	ID=cds3272;Parent=gene3327;Dbxref=Genbank:WP_002208719.1;Name=WP_002208719.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_002208719.1;transl_table=11
NC_017154.1	RefSeq	gene	3601464	3602045	.	-	.	ID=gene3328;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=YPD4_RS16685;old_locus_tag=YPD4_2837
NC_017154.1	Protein Homology	CDS	3601464	3602045	.	-	0	ID=cds3273;Parent=gene3328;Dbxref=Genbank:WP_002208720.1;Name=WP_002208720.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_002208720.1;transl_table=11
NC_017154.1	RefSeq	gene	3602285	3604732	.	+	.	ID=gene3329;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=YPD4_RS16690;old_locus_tag=YPD4_2838
NC_017154.1	Protein Homology	CDS	3602285	3604732	.	+	0	ID=cds3274;Parent=gene3329;Dbxref=Genbank:WP_002214691.1;Name=WP_002214691.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=WP_002214691.1;transl_table=11
NC_017154.1	RefSeq	gene	3604904	3605650	.	-	.	ID=gene3330;Name=YPD4_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16695;old_locus_tag=YPD4_2839
NC_017154.1	Protein Homology	CDS	3604904	3605650	.	-	0	ID=cds3275;Parent=gene3330;Dbxref=Genbank:WP_002208721.1;Name=WP_002208721.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208721.1;transl_table=11
NC_017154.1	RefSeq	gene	3605652	3607505	.	-	.	ID=gene3331;Name=YPD4_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16700;old_locus_tag=YPD4_2840
NC_017154.1	Protein Homology	CDS	3605652	3607505	.	-	0	ID=cds3276;Parent=gene3331;Dbxref=Genbank:WP_002208722.1;Name=WP_002208722.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_002208722.1;transl_table=11
NC_017154.1	RefSeq	gene	3607660	3613392	.	-	.	ID=gene3332;Name=YPD4_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16705;old_locus_tag=YPD4_2841
NC_017154.1	Protein Homology	CDS	3607660	3613392	.	-	0	ID=cds3277;Parent=gene3332;Dbxref=Genbank:WP_002224962.1;Name=WP_002224962.1;gbkey=CDS;product=adhesin;protein_id=WP_002224962.1;transl_table=11
NC_017154.1	RefSeq	gene	3613433	3615223	.	-	.	ID=gene3333;Name=YPD4_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16710;old_locus_tag=YPD4_2842
NC_017154.1	Protein Homology	CDS	3613433	3615223	.	-	0	ID=cds3278;Parent=gene3333;Dbxref=Genbank:WP_002214693.1;Name=WP_002214693.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002214693.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3615950	3616129	.	+	.	ID=id266;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3616312	3617604	.	-	.	ID=gene3334;Name=YPD4_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16715;old_locus_tag=YPD4_2843
NC_017154.1	Protein Homology	CDS	3616312	3617604	.	-	0	ID=cds3279;Parent=gene3334;Dbxref=Genbank:WP_002208729.1;Name=WP_002208729.1;gbkey=CDS;product=allantoate amidohydrolase;protein_id=WP_002208729.1;transl_table=11
NC_017154.1	RefSeq	gene	3617604	3618062	.	-	.	ID=gene3335;Name=YPD4_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16720;old_locus_tag=YPD4_2844
NC_017154.1	Protein Homology	CDS	3617604	3618062	.	-	0	ID=cds3280;Parent=gene3335;Dbxref=Genbank:WP_002208730.1;Name=WP_002208730.1;gbkey=CDS;product=aminotransferase V;protein_id=WP_002208730.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3618042	3620001	.	+	.	ID=id267;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3618132	3619154	.	+	.	ID=gene3336;Name=YPD4_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16725;old_locus_tag=YPD4_2845
NC_017154.1	Protein Homology	CDS	3618132	3619154	.	+	0	ID=cds3281;Parent=gene3336;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	3619154	3619933	.	+	.	ID=gene3337;Name=YPD4_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16730;old_locus_tag=YPD4_2846
NC_017154.1	Protein Homology	CDS	3619154	3619933	.	+	0	ID=cds3282;Parent=gene3337;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	3619984	3620907	.	-	.	ID=gene3338;Name=YPD4_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16735;old_locus_tag=YPD4_2847
NC_017154.1	Protein Homology	CDS	3619984	3620907	.	-	0	ID=cds3283;Parent=gene3338;Dbxref=Genbank:WP_002208731.1;Name=WP_002208731.1;gbkey=CDS;product=purine catabolism protein PucG;protein_id=WP_002208731.1;transl_table=11
NC_017154.1	RefSeq	gene	3620939	3621685	.	-	.	ID=gene3339;Name=YPD4_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16740;old_locus_tag=YPD4_2848
NC_017154.1	Protein Homology	CDS	3620939	3621685	.	-	0	ID=cds3284;Parent=gene3339;Dbxref=Genbank:WP_002208732.1;Name=WP_002208732.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002208732.1;transl_table=11
NC_017154.1	RefSeq	gene	3621666	3622319	.	-	.	ID=gene3340;Name=YPD4_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16745;old_locus_tag=YPD4_2849
NC_017154.1	Protein Homology	CDS	3621666	3622319	.	-	0	ID=cds3285;Parent=gene3340;Dbxref=Genbank:WP_002208733.1;Name=WP_002208733.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002208733.1;transl_table=11
NC_017154.1	RefSeq	gene	3622316	3622984	.	-	.	ID=gene3341;Name=YPD4_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16750;old_locus_tag=YPD4_2850
NC_017154.1	Protein Homology	CDS	3622316	3622984	.	-	0	ID=cds3286;Parent=gene3341;Dbxref=Genbank:WP_002208734.1;Name=WP_002208734.1;gbkey=CDS;product=polar amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11
NC_017154.1	RefSeq	gene	3622997	3623785	.	-	.	ID=gene3342;Name=YPD4_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16755;old_locus_tag=YPD4_2851
NC_017154.1	Protein Homology	CDS	3622997	3623785	.	-	0	ID=cds3287;Parent=gene3342;Dbxref=Genbank:WP_002208735.1;Name=WP_002208735.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002208735.1;transl_table=11
NC_017154.1	RefSeq	gene	3623896	3624111	.	-	.	ID=gene3343;Name=YPD4_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16760
NC_017154.1	Protein Homology	CDS	3623896	3624111	.	-	0	ID=cds3288;Parent=gene3343;Dbxref=Genbank:WP_002215957.1;Name=WP_002215957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215957.1;transl_table=11
NC_017154.1	RefSeq	gene	3624113	3624946	.	-	.	ID=gene3344;Name=YPD4_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16765;old_locus_tag=YPD4_2852
NC_017154.1	Protein Homology	CDS	3624113	3624946	.	-	0	ID=cds3289;Parent=gene3344;Dbxref=Genbank:WP_002208736.1;Name=WP_002208736.1;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=WP_002208736.1;transl_table=11
NC_017154.1	RefSeq	gene	3625256	3625459	.	+	.	ID=gene3345;Name=YPD4_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16770
NC_017154.1	Protein Homology	CDS	3625256	3625459	.	+	0	ID=cds3290;Parent=gene3345;Dbxref=Genbank:WP_002208738.1;Name=WP_002208738.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208738.1;transl_table=11
NC_017154.1	RefSeq	gene	3625456	3626853	.	+	.	ID=gene3346;Name=YPD4_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16775;old_locus_tag=YPD4_2853
NC_017154.1	Protein Homology	CDS	3625456	3626853	.	+	0	ID=cds3291;Parent=gene3346;Dbxref=Genbank:WP_002208739.1;Name=WP_002208739.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=WP_002208739.1;transl_table=11
NC_017154.1	RefSeq	gene	3626963	3627349	.	+	.	ID=gene3347;Name=YPD4_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16780;old_locus_tag=YPD4_2854
NC_017154.1	Protein Homology	CDS	3626963	3627349	.	+	0	ID=cds3292;Parent=gene3347;Dbxref=Genbank:WP_002264506.1;Name=WP_002264506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002264506.1;transl_table=11
NC_017154.1	RefSeq	gene	3627577	3628776	.	+	.	ID=gene3348;Name=YPD4_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16785;old_locus_tag=YPD4_2855
NC_017154.1	Protein Homology	CDS	3627577	3628776	.	+	0	ID=cds3293;Parent=gene3348;Dbxref=Genbank:WP_002208741.1;Name=WP_002208741.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002208741.1;transl_table=11
NC_017154.1	RefSeq	gene	3628936	3629709	.	+	.	ID=gene3349;Name=YPD4_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16790;old_locus_tag=YPD4_2856
NC_017154.1	Protein Homology	CDS	3628936	3629709	.	+	0	ID=cds3294;Parent=gene3349;Dbxref=Genbank:WP_002208742.1;Name=WP_002208742.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002208742.1;transl_table=11
NC_017154.1	RefSeq	gene	3629706	3630047	.	+	.	ID=gene3350;Name=YPD4_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16795;old_locus_tag=YPD4_2857
NC_017154.1	Protein Homology	CDS	3629706	3630047	.	+	0	ID=cds3295;Parent=gene3350;Dbxref=Genbank:WP_002208743.1;Name=WP_002208743.1;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=WP_002208743.1;transl_table=11
NC_017154.1	RefSeq	gene	3630219	3630731	.	+	.	ID=gene3351;Name=YPD4_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16800;old_locus_tag=YPD4_2858
NC_017154.1	Protein Homology	CDS	3630219	3630731	.	+	0	ID=cds3296;Parent=gene3351;Dbxref=Genbank:WP_002208744.1;Name=WP_002208744.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208744.1;transl_table=11
NC_017154.1	RefSeq	gene	3631119	3632288	.	+	.	ID=gene3352;Name=YPD4_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16805;old_locus_tag=YPD4_2859
NC_017154.1	Protein Homology	CDS	3631119	3632288	.	+	0	ID=cds3297;Parent=gene3352;Dbxref=Genbank:WP_015684007.1;Name=WP_015684007.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug transporter;protein_id=WP_015684007.1;transl_table=11
NC_017154.1	RefSeq	gene	3632327	3633864	.	+	.	ID=gene3353;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=YPD4_RS16810;pseudo=true
NC_017154.1	Protein Homology	CDS	3632327	3633864	.	+	0	ID=cds3298;Parent=gene3353;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=emrB;product=multidrug resistance protein B;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3633987	3635153	.	-	.	ID=gene3354;Name=YPD4_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16815;old_locus_tag=YPD4_2862
NC_017154.1	Protein Homology	CDS	3633987	3635153	.	-	0	ID=cds3299;Parent=gene3354;Dbxref=Genbank:WP_002208747.1;Name=WP_002208747.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208747.1;transl_table=11
NC_017154.1	RefSeq	gene	3635405	3635841	.	+	.	ID=gene3355;Name=YPD4_RS16820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS16820;pseudo=true
NC_017154.1	Protein Homology	CDS	3635405	3635841	.	+	0	ID=cds3300;Parent=gene3355;exception=annotated by transcript or proteomic data;gbkey=CDS;product=thioredoxin;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3636012	3636761	.	+	.	ID=gene3356;Name=YPD4_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16825;old_locus_tag=YPD4_2863
NC_017154.1	Protein Homology	CDS	3636012	3636761	.	+	0	ID=cds3301;Parent=gene3356;Dbxref=Genbank:WP_002208749.1;Name=WP_002208749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208749.1;transl_table=11
NC_017154.1	RefSeq	gene	3636804	3639446	.	+	.	ID=gene3357;Name=YPD4_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16830;old_locus_tag=YPD4_2864
NC_017154.1	Protein Homology	CDS	3636804	3639446	.	+	0	ID=cds3302;Parent=gene3357;Dbxref=Genbank:WP_002208750.1;Name=WP_002208750.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208750.1;transl_table=11
NC_017154.1	RefSeq	gene	3639622	3640977	.	+	.	ID=gene3358;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=YPD4_RS16835;old_locus_tag=YPD4_2865
NC_017154.1	Protein Homology	CDS	3639622	3640977	.	+	0	ID=cds3303;Parent=gene3358;Dbxref=Genbank:WP_002208751.1;Name=WP_002208751.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_002208751.1;transl_table=11
NC_017154.1	RefSeq	gene	3641039	3641380	.	+	.	ID=gene3359;Name=YPD4_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16840;old_locus_tag=YPD4_2866
NC_017154.1	Protein Homology	CDS	3641039	3641380	.	+	0	ID=cds3304;Parent=gene3359;Dbxref=Genbank:WP_002208752.1;Name=WP_002208752.1;Note=required for high salt suppression of motility;gbkey=CDS;product=lipoprotein;protein_id=WP_002208752.1;transl_table=11
NC_017154.1	RefSeq	gene	3641489	3641680	.	-	.	ID=gene3360;Name=YPD4_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16845
NC_017154.1	Protein Homology	CDS	3641489	3641680	.	-	0	ID=cds3305;Parent=gene3360;Dbxref=Genbank:WP_002360510.1;Name=WP_002360510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002360510.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3641505	3641619	.	+	.	ID=id268;gbkey=repeat_region
NC_017154.1	RefSeq	repeat_region	3641636	3647341	.	+	.	ID=id269;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3641768	3641883	.	-	.	ID=gene3361;Name=YPD4_RS16850;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS16850
NC_017154.1	cmsearch	rRNA	3641768	3641883	.	-	.	ID=rna51;Parent=gene3361;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	cmsearch	exon	3641768	3641883	.	-	.	ID=id270;Parent=rna51;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	RefSeq	gene	3641975	3644908	.	-	.	ID=gene3362;Name=YPD4_RS16855;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS16855;old_locus_tag=YPD4_r9
NC_017154.1	RefSeq	rRNA	3641975	3644908	.	-	.	ID=rna52;Parent=gene3362;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	exon	3641975	3644908	.	-	.	ID=id271;Parent=rna52;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	gene	3645152	3645227	.	-	.	ID=gene3363;Name=YPD4_RS16860;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS16860;old_locus_tag=YPD4_t46
NC_017154.1	tRNAscan-SE	tRNA	3645152	3645227	.	-	.	ID=rna53;Parent=gene3363;anticodon=(pos:complement(3645191..3645193));gbkey=tRNA;product=tRNA-Glu
NC_017154.1	tRNAscan-SE	exon	3645152	3645227	.	-	.	ID=id272;Parent=rna53;anticodon=(pos:complement(3645191..3645193));gbkey=tRNA;product=tRNA-Glu
NC_017154.1	RefSeq	gene	3645361	3646909	.	-	.	ID=gene3364;Name=YPD4_RS16865;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS16865;old_locus_tag=YPD4_r10
NC_017154.1	RefSeq	rRNA	3645361	3646909	.	-	.	ID=rna54;Parent=gene3364;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	exon	3645361	3646909	.	-	.	ID=id273;Parent=rna54;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	gene	3647423	3649995	.	-	.	ID=gene3365;Name=YPD4_RS16875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS16875;old_locus_tag=YPD4_2868;pseudo=true
NC_017154.1	Protein Homology	CDS	3647423	3649995	.	-	0	ID=cds3306;Parent=gene3365;exception=annotated by transcript or proteomic data;gbkey=CDS;product=Clp protease ClpB;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3650125	3650857	.	-	.	ID=gene3366;Name=YPD4_RS16880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS16880;pseudo=true
NC_017154.1	Protein Homology	CDS	3650125	3650857	.	-	0	ID=cds3307;Parent=gene3366;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3650859	3651836	.	-	.	ID=gene3367;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=YPD4_RS16885;old_locus_tag=YPD4_2871
NC_017154.1	Protein Homology	CDS	3650859	3651836	.	-	0	ID=cds3308;Parent=gene3367;Dbxref=Genbank:WP_002209470.1;Name=WP_002209470.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=ribosomal large subunit pseudouridine synthase D;protein_id=WP_002209470.1;transl_table=11
NC_017154.1	RefSeq	gene	3651972	3652703	.	+	.	ID=gene3368;Name=YPD4_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16890;old_locus_tag=YPD4_2872
NC_017154.1	Protein Homology	CDS	3651972	3652703	.	+	0	ID=cds3309;Parent=gene3368;Dbxref=Genbank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;product=outer membrane biogenesis protein BamD;protein_id=WP_002209469.1;transl_table=11
NC_017154.1	RefSeq	gene	3653058	3653420	.	+	.	ID=gene3369;Name=YPD4_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16895;old_locus_tag=YPD4_2873
NC_017154.1	Protein Homology	CDS	3653058	3653420	.	+	0	ID=cds3310;Parent=gene3369;Dbxref=Genbank:WP_002209468.1;Name=WP_002209468.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=cold-shock protein;protein_id=WP_002209468.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3653641	3654361	.	+	.	ID=id274;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3653751	3654209	.	-	.	ID=gene3370;Name=YPD4_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16900;old_locus_tag=YPD4_2874
NC_017154.1	Protein Homology	CDS	3653751	3654209	.	-	0	ID=cds3311;Parent=gene3370;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	3654199	3654357	.	-	.	ID=gene3371;Name=YPD4_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16905
NC_017154.1	Protein Homology	CDS	3654199	3654357	.	-	0	ID=cds3312;Parent=gene3371;Dbxref=Genbank:WP_002217797.1;Name=WP_002217797.1;gbkey=CDS;product=invasin;protein_id=WP_002217797.1;transl_table=11
NC_017154.1	RefSeq	gene	3654492	3655649	.	+	.	ID=gene3372;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=YPD4_RS16910;old_locus_tag=YPD4_2875
NC_017154.1	Protein Homology	CDS	3654492	3655649	.	+	0	ID=cds3313;Parent=gene3372;Dbxref=Genbank:WP_002228330.1;Name=WP_002228330.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_002228330.1;transl_table=11
NC_017154.1	RefSeq	gene	3655754	3656875	.	-	.	ID=gene3373;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=YPD4_RS16915;old_locus_tag=YPD4_2876
NC_017154.1	Protein Homology	CDS	3655754	3656875	.	-	0	ID=cds3314;Parent=gene3373;Dbxref=Genbank:WP_002209465.1;Name=WP_002209465.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=chorismate mutase;protein_id=WP_002209465.1;transl_table=11
NC_017154.1	RefSeq	gene	3656888	3657959	.	-	.	ID=gene3374;Name=YPD4_RS16920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS16920;pseudo=true
NC_017154.1	Protein Homology	CDS	3656888	3657959	.	-	0	ID=cds3315;Parent=gene3374;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3658192	3658908	.	+	.	ID=gene3375;Name=YPD4_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16925;old_locus_tag=YPD4_2879
NC_017154.1	Protein Homology	CDS	3658192	3658908	.	+	0	ID=cds3316;Parent=gene3375;Dbxref=Genbank:WP_002209463.1;Name=WP_002209463.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209463.1;transl_table=11
NC_017154.1	RefSeq	gene	3659400	3660017	.	+	.	ID=gene3376;Name=YPD4_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16930;old_locus_tag=YPD4_2880
NC_017154.1	Protein Homology	CDS	3659400	3660017	.	+	0	ID=cds3317;Parent=gene3376;Dbxref=Genbank:WP_002217484.1;Name=WP_002217484.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002217484.1;transl_table=11
NC_017154.1	RefSeq	gene	3660086	3660397	.	+	.	ID=gene3377;Name=YPD4_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16935;old_locus_tag=YPD4_2881
NC_017154.1	Protein Homology	CDS	3660086	3660397	.	+	0	ID=cds3318;Parent=gene3377;Dbxref=Genbank:WP_002228328.1;Name=WP_002228328.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002228328.1;transl_table=11
NC_017154.1	RefSeq	gene	3660385	3660681	.	+	.	ID=gene3378;Name=YPD4_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16940
NC_017154.1	Protein Homology	CDS	3660385	3660681	.	+	0	ID=cds3319;Parent=gene3378;Dbxref=Genbank:WP_002217480.1;Name=WP_002217480.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002217480.1;transl_table=11
NC_017154.1	RefSeq	gene	3661004	3661771	.	+	.	ID=gene3379;Name=YPD4_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16945;old_locus_tag=YPD4_2882
NC_017154.1	Protein Homology	CDS	3661004	3661771	.	+	0	ID=cds3320;Parent=gene3379;Dbxref=Genbank:WP_002209462.1;Name=WP_002209462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209462.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3661961	3662684	.	+	.	ID=id275;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3662074	3662532	.	-	.	ID=gene3380;Name=YPD4_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16950;old_locus_tag=YPD4_2883
NC_017154.1	Protein Homology	CDS	3662074	3662532	.	-	0	ID=cds3321;Parent=gene3380;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	3662522	3662677	.	-	.	ID=gene3381;Name=YPD4_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16955
NC_017154.1	Protein Homology	CDS	3662522	3662677	.	-	0	ID=cds3322;Parent=gene3381;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	3662744	3663091	.	-	.	ID=gene3382;Name=YPD4_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16960;old_locus_tag=YPD4_2884
NC_017154.1	Protein Homology	CDS	3662744	3663091	.	-	0	ID=cds3323;Parent=gene3382;Dbxref=Genbank:WP_002209461.1;Name=WP_002209461.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11
NC_017154.1	RefSeq	gene	3663172	3663912	.	-	.	ID=gene3383;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=YPD4_RS16965
NC_017154.1	Protein Homology	CDS	3663172	3663912	.	-	0	ID=cds3324;Parent=gene3383;Dbxref=Genbank:WP_002222284.1;Name=WP_002222284.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=WP_002222284.1;transl_table=11
NC_017154.1	RefSeq	gene	3663951	3664500	.	-	.	ID=gene3384;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=pseudogene;locus_tag=YPD4_RS16970;old_locus_tag=YPD4_2886;pseudo=true
NC_017154.1	Protein Homology	CDS	3663951	3664500	.	-	0	ID=cds3325;Parent=gene3384;Note=Essential for efficient processing of 16S rRNA;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=rimM;product=16S rRNA-processing protein RimM;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3664522	3664770	.	-	.	ID=gene3385;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=YPD4_RS16975
NC_017154.1	Protein Homology	CDS	3664522	3664770	.	-	0	ID=cds3326;Parent=gene3385;Dbxref=Genbank:WP_002209458.1;Name=WP_002209458.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_002209458.1;transl_table=11
NC_017154.1	RefSeq	gene	3664998	3666359	.	-	.	ID=gene3386;Name=YPD4_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16980;old_locus_tag=YPD4_2887
NC_017154.1	Protein Homology	CDS	3664998	3666359	.	-	0	ID=cds3327;Parent=gene3386;Dbxref=Genbank:WP_002209456.1;Name=WP_002209456.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_002209456.1;transl_table=11
NC_017154.1	RefSeq	gene	3666525	3667316	.	+	.	ID=gene3387;Name=YPD4_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16985;old_locus_tag=YPD4_2888
NC_017154.1	Protein Homology	CDS	3666525	3667316	.	+	0	ID=cds3328;Parent=gene3387;Dbxref=Genbank:WP_002209455.1;Name=WP_002209455.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209455.1;transl_table=11
NC_017154.1	RefSeq	gene	3667385	3668668	.	+	.	ID=gene3388;Name=YPD4_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16990;old_locus_tag=YPD4_2889
NC_017154.1	Protein Homology	CDS	3667385	3668668	.	+	0	ID=cds3329;Parent=gene3388;Dbxref=Genbank:WP_002209454.1;Name=WP_002209454.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209454.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3668694	3669417	.	+	.	ID=id276;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3668806	3669264	.	-	.	ID=gene3389;Name=YPD4_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS16995;old_locus_tag=YPD4_2890
NC_017154.1	Protein Homology	CDS	3668806	3669264	.	-	0	ID=cds3330;Parent=gene3389;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	3669254	3669427	.	-	.	ID=gene3390;Name=YPD4_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17000
NC_017154.1	Protein Homology	CDS	3669254	3669427	.	-	0	ID=cds3331;Parent=gene3390;Dbxref=Genbank:WP_029787775.1;Name=WP_029787775.1;gbkey=CDS;product=transposase;protein_id=WP_029787775.1;transl_table=11
NC_017154.1	RefSeq	gene	3669468	3669983	.	-	.	ID=gene3391;Name=YPD4_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17005;old_locus_tag=YPD4_2891
NC_017154.1	Protein Homology	CDS	3669468	3669983	.	-	0	ID=cds3332;Parent=gene3391;Dbxref=Genbank:WP_002209453.1;Name=WP_002209453.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11
NC_017154.1	RefSeq	gene	3670151	3671710	.	-	.	ID=gene3392;Name=YPD4_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17010;old_locus_tag=YPD4_2892
NC_017154.1	Protein Homology	CDS	3670151	3671710	.	-	0	ID=cds3333;Parent=gene3392;Dbxref=Genbank:WP_002228236.1;Name=WP_002228236.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_002228236.1;transl_table=11
NC_017154.1	RefSeq	gene	3671793	3672221	.	-	.	ID=gene3393;Name=YPD4_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17015;old_locus_tag=YPD4_2893
NC_017154.1	Protein Homology	CDS	3671793	3672221	.	-	0	ID=cds3334;Parent=gene3393;Dbxref=Genbank:WP_002209451.1;Name=WP_002209451.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209451.1;transl_table=11
NC_017154.1	RefSeq	gene	3672218	3672784	.	-	.	ID=gene3394;Name=YPD4_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17020;old_locus_tag=YPD4_2894
NC_017154.1	Protein Homology	CDS	3672218	3672784	.	-	0	ID=cds3335;Parent=gene3394;Dbxref=Genbank:WP_002209450.1;Name=WP_002209450.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=fructose-1-P/6-phosphogluconate phosphatase;protein_id=WP_002209450.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3672999	3673396	.	+	.	ID=id277;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3673379	3673455	.	-	.	ID=gene3395;Name=YPD4_RS17025;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS17025;old_locus_tag=YPD4_t47
NC_017154.1	tRNAscan-SE	tRNA	3673379	3673455	.	-	.	ID=rna55;Parent=gene3395;anticodon=(pos:complement(3673419..3673421));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	tRNAscan-SE	exon	3673379	3673455	.	-	.	ID=id278;Parent=rna55;anticodon=(pos:complement(3673419..3673421));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	RefSeq	gene	3673535	3673611	.	-	.	ID=gene3396;Name=YPD4_RS17030;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS17030;old_locus_tag=YPD4_t48
NC_017154.1	tRNAscan-SE	tRNA	3673535	3673611	.	-	.	ID=rna56;Parent=gene3396;anticodon=(pos:complement(3673575..3673577));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	tRNAscan-SE	exon	3673535	3673611	.	-	.	ID=id279;Parent=rna56;anticodon=(pos:complement(3673575..3673577));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	RefSeq	gene	3673620	3673712	.	-	.	ID=gene3397;Name=YPD4_RS17035;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS17035;old_locus_tag=YPD4_t49
NC_017154.1	tRNAscan-SE	tRNA	3673620	3673712	.	-	.	ID=rna57;Parent=gene3397;anticodon=(pos:complement(3673676..3673678));gbkey=tRNA;product=tRNA-Ser
NC_017154.1	tRNAscan-SE	exon	3673620	3673712	.	-	.	ID=id280;Parent=rna57;anticodon=(pos:complement(3673676..3673678));gbkey=tRNA;product=tRNA-Ser
NC_017154.1	RefSeq	gene	3674075	3674260	.	-	.	ID=gene3398;Name=YPD4_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17040
NC_017154.1	Protein Homology	CDS	3674075	3674260	.	-	0	ID=cds3336;Parent=gene3398;Dbxref=Genbank:WP_002209449.1;Name=WP_002209449.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator homolog;protein_id=WP_002209449.1;transl_table=11
NC_017154.1	RefSeq	gene	3674510	3677137	.	-	.	ID=gene3399;Name=YPD4_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17045;old_locus_tag=YPD4_2895
NC_017154.1	Protein Homology	CDS	3674510	3677137	.	-	0	ID=cds3337;Parent=gene3399;Dbxref=Genbank:WP_002209448.1;Name=WP_002209448.1;gbkey=CDS;product=alanine--tRNA ligase;protein_id=WP_002209448.1;transl_table=11
NC_017154.1	RefSeq	gene	3677277	3677840	.	-	.	ID=gene3400;Name=YPD4_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17050;old_locus_tag=YPD4_2896
NC_017154.1	Protein Homology	CDS	3677277	3677840	.	-	0	ID=cds3338;Parent=gene3400;Dbxref=Genbank:WP_002209447.1;Name=WP_002209447.1;gbkey=CDS;product=regulatory protein RecX;protein_id=WP_002209447.1;transl_table=11
NC_017154.1	RefSeq	gene	3677978	3679048	.	-	.	ID=gene3401;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=YPD4_RS17055;old_locus_tag=YPD4_2897
NC_017154.1	Protein Homology	CDS	3677978	3679048	.	-	0	ID=cds3339;Parent=gene3401;Dbxref=Genbank:WP_002209446.1;Name=WP_002209446.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=protein RecA;protein_id=WP_002209446.1;transl_table=11
NC_017154.1	RefSeq	gene	3679163	3679651	.	-	.	ID=gene3402;Name=YPD4_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17060;old_locus_tag=YPD4_2898
NC_017154.1	Protein Homology	CDS	3679163	3679651	.	-	0	ID=cds3340;Parent=gene3402;Dbxref=Genbank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209445.1;transl_table=11
NC_017154.1	RefSeq	gene	3679968	3681308	.	+	.	ID=gene3403;Name=YPD4_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17065;old_locus_tag=YPD4_2899
NC_017154.1	Protein Homology	CDS	3679968	3681308	.	+	0	ID=cds3341;Parent=gene3403;Dbxref=Genbank:WP_002209444.1;Name=WP_002209444.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209444.1;transl_table=11
NC_017154.1	RefSeq	gene	3681556	3682500	.	+	.	ID=gene3404;Name=YPD4_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17070;old_locus_tag=YPD4_2900
NC_017154.1	Protein Homology	CDS	3681556	3682500	.	+	0	ID=cds3342;Parent=gene3404;Dbxref=Genbank:WP_002209443.1;Name=WP_002209443.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11
NC_017154.1	RefSeq	gene	3682722	3684146	.	-	.	ID=gene3405;Name=YPD4_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17075;old_locus_tag=YPD4_2901
NC_017154.1	Protein Homology	CDS	3682722	3684146	.	-	0	ID=cds3343;Parent=gene3405;Dbxref=Genbank:WP_002209441.1;Name=WP_002209441.1;gbkey=CDS;product=fucose isomerase;protein_id=WP_002209441.1;transl_table=11
NC_017154.1	RefSeq	gene	3684167	3685654	.	-	.	ID=gene3406;Name=YPD4_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17080;old_locus_tag=YPD4_2902
NC_017154.1	Protein Homology	CDS	3684167	3685654	.	-	0	ID=cds3344;Parent=gene3406;Dbxref=Genbank:WP_002209440.1;Name=WP_002209440.1;gbkey=CDS;product=glycerol kinase;protein_id=WP_002209440.1;transl_table=11
NC_017154.1	RefSeq	gene	3685657	3686601	.	-	.	ID=gene3407;Name=YPD4_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17085;old_locus_tag=YPD4_2903
NC_017154.1	Protein Homology	CDS	3685657	3686601	.	-	0	ID=cds3345;Parent=gene3407;Dbxref=Genbank:WP_002209439.1;Name=WP_002209439.1;gbkey=CDS;product=transketolase;protein_id=WP_002209439.1;transl_table=11
NC_017154.1	RefSeq	gene	3686594	3687424	.	-	.	ID=gene3408;Name=YPD4_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17090;old_locus_tag=YPD4_2904
NC_017154.1	Protein Homology	CDS	3686594	3687424	.	-	0	ID=cds3346;Parent=gene3408;Dbxref=Genbank:WP_002209438.1;Name=WP_002209438.1;gbkey=CDS;product=transketolase;protein_id=WP_002209438.1;transl_table=11
NC_017154.1	RefSeq	gene	3687680	3688822	.	-	.	ID=gene3409;Name=YPD4_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17095;old_locus_tag=YPD4_2905
NC_017154.1	Protein Homology	CDS	3687680	3688822	.	-	0	ID=cds3347;Parent=gene3409;Dbxref=Genbank:WP_002354764.1;Name=WP_002354764.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002354764.1;transl_table=11
NC_017154.1	RefSeq	gene	3688822	3690345	.	-	.	ID=gene3410;Name=YPD4_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17100;old_locus_tag=YPD4_2906
NC_017154.1	Protein Homology	CDS	3688822	3690345	.	-	0	ID=cds3348;Parent=gene3410;Dbxref=Genbank:WP_002209436.1;Name=WP_002209436.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209436.1;transl_table=11
NC_017154.1	RefSeq	gene	3690345	3690962	.	-	.	ID=gene3411;Name=YPD4_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17105;old_locus_tag=YPD4_2907
NC_017154.1	Protein Homology	CDS	3690345	3690962	.	-	0	ID=cds3349;Parent=gene3411;Dbxref=Genbank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209435.1;transl_table=11
NC_017154.1	RefSeq	gene	3691055	3691996	.	-	.	ID=gene3412;Name=YPD4_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17110;old_locus_tag=YPD4_2908
NC_017154.1	Protein Homology	CDS	3691055	3691996	.	-	0	ID=cds3350;Parent=gene3412;Dbxref=Genbank:WP_002209434.1;Name=WP_002209434.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209434.1;transl_table=11
NC_017154.1	RefSeq	gene	3692532	3694745	.	+	.	ID=gene3413;Name=YPD4_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17115;old_locus_tag=YPD4_2909
NC_017154.1	Protein Homology	CDS	3692532	3694745	.	+	0	ID=cds3351;Parent=gene3413;Dbxref=Genbank:WP_002209433.1;Name=WP_002209433.1;gbkey=CDS;product=catalase-peroxidase;protein_id=WP_002209433.1;transl_table=11
NC_017154.1	RefSeq	gene	3694822	3695205	.	+	.	ID=gene3414;Name=YPD4_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17120
NC_017154.1	Protein Homology	CDS	3694822	3695205	.	+	0	ID=cds3352;Parent=gene3414;Dbxref=Genbank:WP_002215101.1;Name=WP_002215101.1;Note=electron transport protein;gbkey=CDS;product=soluble cytochrome b562 1;protein_id=WP_002215101.1;transl_table=11
NC_017154.1	RefSeq	gene	3695353	3695883	.	+	.	ID=gene3415;Name=YPD4_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17125
NC_017154.1	Protein Homology	CDS	3695353	3695883	.	+	0	ID=cds3353;Parent=gene3415;Dbxref=Genbank:WP_002215100.1;Name=WP_002215100.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;product=cytochrome b561;protein_id=WP_002215100.1;transl_table=11
NC_017154.1	RefSeq	gene	3696140	3696850	.	-	.	ID=gene3416;Name=YPD4_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17130;old_locus_tag=YPD4_2911
NC_017154.1	Protein Homology	CDS	3696140	3696850	.	-	0	ID=cds3354;Parent=gene3416;Dbxref=Genbank:WP_002209430.1;Name=WP_002209430.1;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=WP_002209430.1;transl_table=11
NC_017154.1	RefSeq	gene	3696996	3697856	.	-	.	ID=gene3417;Name=YPD4_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17135;old_locus_tag=YPD4_2912
NC_017154.1	Protein Homology	CDS	3696996	3697856	.	-	0	ID=cds3355;Parent=gene3417;Dbxref=Genbank:WP_002209429.1;Name=WP_002209429.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit C;protein_id=WP_002209429.1;transl_table=11
NC_017154.1	RefSeq	gene	3697858	3698475	.	-	.	ID=gene3418;Name=YPD4_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17140;old_locus_tag=YPD4_2913
NC_017154.1	Protein Homology	CDS	3697858	3698475	.	-	0	ID=cds3356;Parent=gene3418;Dbxref=Genbank:WP_002209428.1;Name=WP_002209428.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209428.1;transl_table=11
NC_017154.1	RefSeq	gene	3698487	3700937	.	-	.	ID=gene3419;Name=YPD4_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17145;old_locus_tag=YPD4_2914
NC_017154.1	Protein Homology	CDS	3698487	3700937	.	-	0	ID=cds3357;Parent=gene3419;Dbxref=Genbank:WP_002209427.1;Name=WP_002209427.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002209427.1;transl_table=11
NC_017154.1	RefSeq	gene	3701400	3702095	.	-	.	ID=gene3420;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPD4_RS17150;old_locus_tag=YPD4_2915
NC_017154.1	Protein Homology	CDS	3701400	3702095	.	-	0	ID=cds3358;Parent=gene3420;Dbxref=Genbank:WP_002209426.1;Name=WP_002209426.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11
NC_017154.1	RefSeq	gene	3702798	3703607	.	+	.	ID=gene3421;Name=YPD4_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17155;old_locus_tag=YPD4_2916
NC_017154.1	Protein Homology	CDS	3702798	3703607	.	+	0	ID=cds3359;Parent=gene3421;Dbxref=Genbank:WP_002209424.1;Name=WP_002209424.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209424.1;transl_table=11
NC_017154.1	RefSeq	gene	3703768	3704772	.	+	.	ID=gene3422;Name=YPD4_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17160;old_locus_tag=YPD4_2917
NC_017154.1	Protein Homology	CDS	3703768	3704772	.	+	0	ID=cds3360;Parent=gene3422;Dbxref=Genbank:WP_002216011.1;Name=WP_002216011.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002216011.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3704874	3705590	.	+	.	ID=id281;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3705023	3705480	.	+	.	ID=gene3423;Name=YPD4_RS17165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS17165;pseudo=true
NC_017154.1	Protein Homology	CDS	3705023	3705480	.	+	0	ID=cds3361;Parent=gene3423;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3705631	3707145	.	+	.	ID=gene3424;Name=YPD4_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17170;old_locus_tag=YPD4_2918
NC_017154.1	Protein Homology	CDS	3705631	3707145	.	+	0	ID=cds3362;Parent=gene3424;Dbxref=Genbank:WP_002209422.1;Name=WP_002209422.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209422.1;transl_table=11
NC_017154.1	RefSeq	gene	3707138	3708127	.	+	.	ID=gene3425;Name=YPD4_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17175;old_locus_tag=YPD4_2919
NC_017154.1	Protein Homology	CDS	3707138	3708127	.	+	0	ID=cds3363;Parent=gene3425;Dbxref=Genbank:WP_002209421.1;Name=WP_002209421.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209421.1;transl_table=11
NC_017154.1	RefSeq	gene	3708140	3709177	.	+	.	ID=gene3426;Name=YPD4_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17180;old_locus_tag=YPD4_2920
NC_017154.1	Protein Homology	CDS	3708140	3709177	.	+	0	ID=cds3364;Parent=gene3426;Dbxref=Genbank:WP_002216010.1;Name=WP_002216010.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002216010.1;transl_table=11
NC_017154.1	RefSeq	gene	3709383	3710264	.	+	.	ID=gene3427;Name=YPD4_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17185;old_locus_tag=YPD4_2921
NC_017154.1	Protein Homology	CDS	3709383	3710264	.	+	0	ID=cds3365;Parent=gene3427;Dbxref=Genbank:WP_002209420.1;Name=WP_002209420.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=WP_002209420.1;transl_table=11
NC_017154.1	RefSeq	gene	3710275	3711771	.	+	.	ID=gene3428;Name=YPD4_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17190;old_locus_tag=YPD4_2922
NC_017154.1	Protein Homology	CDS	3710275	3711771	.	+	0	ID=cds3366;Parent=gene3428;Dbxref=Genbank:WP_002209419.1;Name=WP_002209419.1;gbkey=CDS;product=3-keto-L-gulonate kinase;protein_id=WP_002209419.1;transl_table=11
NC_017154.1	RefSeq	gene	3712169	3713812	.	+	.	ID=gene3429;Name=YPD4_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17195;old_locus_tag=YPD4_2923
NC_017154.1	Protein Homology	CDS	3712169	3713812	.	+	0	ID=cds3367;Parent=gene3429;Dbxref=Genbank:WP_002209418.1;Name=WP_002209418.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase;protein_id=WP_002209418.1;transl_table=11
NC_017154.1	RefSeq	gene	3713995	3714246	.	+	.	ID=gene3430;Name=YPD4_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17200
NC_017154.1	Protein Homology	CDS	3713995	3714246	.	+	0	ID=cds3368;Parent=gene3430;Dbxref=Genbank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209417.1;transl_table=11
NC_017154.1	RefSeq	gene	3714243	3715028	.	+	.	ID=gene3431;Name=YPD4_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17205;old_locus_tag=YPD4_2924
NC_017154.1	Protein Homology	CDS	3714243	3715028	.	+	0	ID=cds3369;Parent=gene3431;Dbxref=Genbank:WP_002209416.1;Name=WP_002209416.1;gbkey=CDS;product=methionine aminopeptidase type I;protein_id=WP_002209416.1;transl_table=11
NC_017154.1	RefSeq	gene	3715038	3715223	.	-	.	ID=gene3432;Name=YPD4_RS17210;gbkey=Gene;gene_biotype=other;locus_tag=YPD4_RS17210
NC_017154.1	RefSeq	gene	3715386	3716573	.	-	.	ID=gene3433;Name=YPD4_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17215;old_locus_tag=YPD4_2925
NC_017154.1	Protein Homology	CDS	3715386	3716573	.	-	0	ID=cds3370;Parent=gene3433;Dbxref=Genbank:WP_002209414.1;Name=WP_002209414.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002209414.1;transl_table=11
NC_017154.1	RefSeq	gene	3717006	3717473	.	-	.	ID=gene3434;Name=YPD4_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17220;old_locus_tag=YPD4_2926
NC_017154.1	Protein Homology	CDS	3717006	3717473	.	-	0	ID=cds3371;Parent=gene3434;Dbxref=Genbank:WP_002229608.1;Name=WP_002229608.1;gbkey=CDS;product=adhesin;protein_id=WP_002229608.1;transl_table=11
NC_017154.1	RefSeq	gene	3717519	3719102	.	-	.	ID=gene3435;Name=YPD4_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17225;old_locus_tag=YPD4_2927
NC_017154.1	Protein Homology	CDS	3717519	3719102	.	-	0	ID=cds3372;Parent=gene3435;Dbxref=Genbank:WP_002354783.1;Name=WP_002354783.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002354783.1;transl_table=11
NC_017154.1	RefSeq	gene	3719275	3719526	.	+	.	ID=gene3436;Name=YPD4_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17230
NC_017154.1	Protein Homology	CDS	3719275	3719526	.	+	0	ID=cds3373;Parent=gene3436;Dbxref=Genbank:WP_002223220.1;Name=WP_002223220.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223220.1;transl_table=11
NC_017154.1	RefSeq	gene	3719763	3721143	.	+	.	ID=gene3437;Name=YPD4_RS17235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS17235;pseudo=true
NC_017154.1	Protein Homology	CDS	3719763	3721143	.	+	0	ID=cds3374;Parent=gene3437;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cytochrome C peroxidase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3721214	3721978	.	+	.	ID=gene3438;Name=YPD4_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17240;old_locus_tag=YPD4_2930
NC_017154.1	Protein Homology	CDS	3721214	3721978	.	+	0	ID=cds3375;Parent=gene3438;Dbxref=Genbank:WP_002209411.1;Name=WP_002209411.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002209411.1;transl_table=11
NC_017154.1	RefSeq	gene	3722402	3722605	.	+	.	ID=gene3439;Name=YPD4_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17245
NC_017154.1	Protein Homology	CDS	3722402	3722605	.	+	0	ID=cds3376;Parent=gene3439;Dbxref=Genbank:WP_002209410.1;Name=WP_002209410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209410.1;transl_table=11
NC_017154.1	RefSeq	gene	3722816	3723079	.	+	.	ID=gene3440;Name=YPD4_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17250
NC_017154.1	Protein Homology	CDS	3722816	3723079	.	+	0	ID=cds3377;Parent=gene3440;Dbxref=Genbank:WP_002217994.1;Name=WP_002217994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217994.1;transl_table=11
NC_017154.1	RefSeq	gene	3723326	3723667	.	+	.	ID=gene3441;Name=YPD4_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17255;old_locus_tag=YPD4_2931
NC_017154.1	Protein Homology	CDS	3723326	3723667	.	+	0	ID=cds3378;Parent=gene3441;Dbxref=Genbank:WP_002209409.1;Name=WP_002209409.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=WP_002209409.1;transl_table=11
NC_017154.1	RefSeq	gene	3723752	3725041	.	+	.	ID=gene3442;Name=YPD4_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17260;old_locus_tag=YPD4_2932
NC_017154.1	Protein Homology	CDS	3723752	3725041	.	+	0	ID=cds3379;Parent=gene3442;Dbxref=Genbank:WP_002209408.1;Name=WP_002209408.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_002209408.1;transl_table=11
NC_017154.1	RefSeq	gene	3725596	3726567	.	+	.	ID=gene3443;Name=YPD4_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17265;old_locus_tag=YPD4_2933
NC_017154.1	Protein Homology	CDS	3725596	3726567	.	+	0	ID=cds3380;Parent=gene3443;Dbxref=Genbank:WP_002209407.1;Name=WP_002209407.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209407.1;transl_table=11
NC_017154.1	RefSeq	gene	3726688	3727362	.	-	.	ID=gene3444;Name=YPD4_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17270;old_locus_tag=YPD4_2934
NC_017154.1	Protein Homology	CDS	3726688	3727362	.	-	0	ID=cds3381;Parent=gene3444;Dbxref=Genbank:WP_002209406.1;Name=WP_002209406.1;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002209406.1;transl_table=11
NC_017154.1	RefSeq	gene	3727369	3728370	.	-	.	ID=gene3445;Name=YPD4_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17275;old_locus_tag=YPD4_2935
NC_017154.1	Protein Homology	CDS	3727369	3728370	.	-	0	ID=cds3382;Parent=gene3445;Dbxref=Genbank:WP_002228229.1;Name=WP_002228229.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002228229.1;transl_table=11
NC_017154.1	RefSeq	gene	3728457	3729227	.	-	.	ID=gene3446;Name=YPD4_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17280;old_locus_tag=YPD4_2936
NC_017154.1	Protein Homology	CDS	3728457	3729227	.	-	0	ID=cds3383;Parent=gene3446;Dbxref=Genbank:WP_002209404.1;Name=WP_002209404.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002209404.1;transl_table=11
NC_017154.1	RefSeq	gene	3729291	3730406	.	-	.	ID=gene3447;Name=YPD4_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17285;old_locus_tag=YPD4_2937
NC_017154.1	Protein Homology	CDS	3729291	3730406	.	-	0	ID=cds3384;Parent=gene3447;Dbxref=Genbank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002209403.1;transl_table=11
NC_017154.1	RefSeq	gene	3730889	3731344	.	+	.	ID=gene3448;Name=YPD4_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17290;old_locus_tag=YPD4_2938
NC_017154.1	Protein Homology	CDS	3730889	3731344	.	+	0	ID=cds3385;Parent=gene3448;Dbxref=Genbank:WP_002209402.1;Name=WP_002209402.1;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_002209402.1;transl_table=11
NC_017154.1	RefSeq	gene	3731507	3731641	.	-	.	ID=gene3449;Name=YPD4_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17295
NC_017154.1	Protein Homology	CDS	3731507	3731641	.	-	0	ID=cds3386;Parent=gene3449;Dbxref=Genbank:WP_002216243.1;Name=WP_002216243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216243.1;transl_table=11
NC_017154.1	RefSeq	gene	3732138	3734693	.	+	.	ID=gene3450;Name=YPD4_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17300;old_locus_tag=YPD4_2939
NC_017154.1	Protein Homology	CDS	3732138	3734693	.	+	0	ID=cds3387;Parent=gene3450;Dbxref=Genbank:WP_002209399.1;Name=WP_002209399.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_002209399.1;transl_table=11
NC_017154.1	RefSeq	gene	3735045	3736043	.	-	.	ID=gene3451;Name=YPD4_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17305;old_locus_tag=YPD4_2940
NC_017154.1	Protein Homology	CDS	3735045	3736043	.	-	0	ID=cds3388;Parent=gene3451;Dbxref=Genbank:WP_002209397.1;Name=WP_002209397.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_002209397.1;transl_table=11
NC_017154.1	RefSeq	gene	3736098	3737081	.	-	.	ID=gene3452;Name=YPD4_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17310;old_locus_tag=YPD4_2941
NC_017154.1	Protein Homology	CDS	3736098	3737081	.	-	0	ID=cds3389;Parent=gene3452;Dbxref=Genbank:WP_002209396.1;Name=WP_002209396.1;gbkey=CDS;product=lipoprotein nlpD;protein_id=WP_002209396.1;transl_table=11
NC_017154.1	RefSeq	gene	3737203	3737829	.	-	.	ID=gene3453;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=YPD4_RS17315;old_locus_tag=YPD4_2942
NC_017154.1	Protein Homology	CDS	3737203	3737829	.	-	0	ID=cds3390;Parent=gene3453;Dbxref=Genbank:WP_002209395.1;Name=WP_002209395.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_002209395.1;transl_table=11
NC_017154.1	RefSeq	gene	3737823	3738587	.	-	.	ID=gene3454;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=YPD4_RS17320;old_locus_tag=YPD4_2943
NC_017154.1	Protein Homology	CDS	3737823	3738587	.	-	0	ID=cds3391;Parent=gene3454;Dbxref=Genbank:WP_002209394.1;Name=WP_002209394.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=5'/3'-nucleotidase SurE;protein_id=WP_002209394.1;transl_table=11
NC_017154.1	RefSeq	gene	3738565	3739614	.	-	.	ID=gene3455;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=YPD4_RS17325;old_locus_tag=YPD4_2944
NC_017154.1	Protein Homology	CDS	3738565	3739614	.	-	0	ID=cds3392;Parent=gene3455;Dbxref=Genbank:WP_002209393.1;Name=WP_002209393.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=WP_002209393.1;transl_table=11
NC_017154.1	RefSeq	gene	3739625	3740113	.	-	.	ID=gene3456;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=YPD4_RS17330;old_locus_tag=YPD4_2945
NC_017154.1	Protein Homology	CDS	3739625	3740113	.	-	0	ID=cds3393;Parent=gene3456;Dbxref=Genbank:WP_002209392.1;Name=WP_002209392.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002209392.1;transl_table=11
NC_017154.1	RefSeq	gene	3740252	3740977	.	-	.	ID=gene3457;Name=YPD4_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17335;old_locus_tag=YPD4_2946
NC_017154.1	Protein Homology	CDS	3740252	3740977	.	-	0	ID=cds3394;Parent=gene3457;Dbxref=Genbank:WP_002209391.1;Name=WP_002209391.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_002209391.1;transl_table=11
NC_017154.1	RefSeq	gene	3740981	3741301	.	-	.	ID=gene3458;Name=YPD4_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17340;old_locus_tag=YPD4_2947
NC_017154.1	Protein Homology	CDS	3740981	3741301	.	-	0	ID=cds3395;Parent=gene3458;Dbxref=Genbank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11
NC_017154.1	RefSeq	gene	3741615	3741932	.	-	.	ID=gene3459;Name=YPD4_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17345;old_locus_tag=YPD4_2948
NC_017154.1	Protein Homology	CDS	3741615	3741932	.	-	0	ID=cds3396;Parent=gene3459;Dbxref=Genbank:WP_002209389.1;Name=WP_002209389.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209389.1;transl_table=11
NC_017154.1	RefSeq	gene	3742123	3742764	.	-	.	ID=gene3460;Name=YPD4_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17350;old_locus_tag=YPD4_2949
NC_017154.1	Protein Homology	CDS	3742123	3742764	.	-	0	ID=cds3397;Parent=gene3460;Dbxref=Genbank:WP_002209388.1;Name=WP_002209388.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylyl-sulfate kinase;protein_id=WP_002209388.1;transl_table=11
NC_017154.1	RefSeq	gene	3742766	3744202	.	-	.	ID=gene3461;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=YPD4_RS17355;old_locus_tag=YPD4_2950
NC_017154.1	Protein Homology	CDS	3742766	3744202	.	-	0	ID=cds3398;Parent=gene3461;Dbxref=Genbank:WP_002228227.1;Name=WP_002228227.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_002228227.1;transl_table=11
NC_017154.1	RefSeq	gene	3744295	3745203	.	-	.	ID=gene3462;Name=YPD4_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17360;old_locus_tag=YPD4_2951
NC_017154.1	Protein Homology	CDS	3744295	3745203	.	-	0	ID=cds3399;Parent=gene3462;Dbxref=Genbank:WP_002209386.1;Name=WP_002209386.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_002209386.1;transl_table=11
NC_017154.1	RefSeq	gene	3745214	3746632	.	-	.	ID=gene3463;Name=YPD4_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17365;old_locus_tag=YPD4_2952
NC_017154.1	Protein Homology	CDS	3745214	3746632	.	-	0	ID=cds3400;Parent=gene3463;Dbxref=Genbank:WP_002209385.1;Name=WP_002209385.1;gbkey=CDS;product=sirohydrochlorin ferrochelatase;protein_id=WP_002209385.1;transl_table=11
NC_017154.1	RefSeq	gene	3746933	3747128	.	-	.	ID=gene3464;Name=YPD4_RS17370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS17370;pseudo=true
NC_017154.1	Protein Homology	CDS	3746933	3747128	.	-	0	ID=cds3401;Parent=gene3464;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3747221	3747421	.	+	.	ID=gene3465;Name=YPD4_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17375
NC_017154.1	Protein Homology	CDS	3747221	3747421	.	+	0	ID=cds3402;Parent=gene3465;Dbxref=Genbank:WP_002209384.1;Name=WP_002209384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209384.1;transl_table=11
NC_017154.1	RefSeq	gene	3747596	3748003	.	+	.	ID=gene3466;Name=YPD4_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17380
NC_017154.1	Protein Homology	CDS	3747596	3748003	.	+	0	ID=cds3403;Parent=gene3466;Dbxref=Genbank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209383.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3748031	3748210	.	+	.	ID=id282;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3748246	3748972	.	-	.	ID=gene3467;Name=YPD4_RS17385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS17385;pseudo=true
NC_017154.1	Protein Homology	CDS	3748246	3748972	.	-	0	ID=cds3404;Parent=gene3467;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3748969	3750699	.	-	.	ID=gene3468;Name=YPD4_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17390;old_locus_tag=YPD4_2955
NC_017154.1	Protein Homology	CDS	3748969	3750699	.	-	0	ID=cds3405;Parent=gene3468;Dbxref=Genbank:WP_002209382.1;Name=WP_002209382.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_002209382.1;transl_table=11
NC_017154.1	RefSeq	gene	3750699	3752519	.	-	.	ID=gene3469;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=YPD4_RS17395;old_locus_tag=YPD4_2956
NC_017154.1	Protein Homology	CDS	3750699	3752519	.	-	0	ID=cds3406;Parent=gene3469;Dbxref=Genbank:WP_002209381.1;Name=WP_002209381.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_002209381.1;transl_table=11
NC_017154.1	RefSeq	gene	3752912	3753271	.	+	.	ID=gene3470;Name=YPD4_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17400;old_locus_tag=YPD4_2957
NC_017154.1	Protein Homology	CDS	3752912	3753271	.	+	0	ID=cds3407;Parent=gene3470;Dbxref=Genbank:WP_002209380.1;Name=WP_002209380.1;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=WP_002209380.1;transl_table=11
NC_017154.1	RefSeq	gene	3753505	3754176	.	-	.	ID=gene3471;Name=YPD4_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17405;old_locus_tag=YPD4_2958
NC_017154.1	Protein Homology	CDS	3753505	3754176	.	-	0	ID=cds3408;Parent=gene3471;Dbxref=Genbank:WP_002209379.1;Name=WP_002209379.1;gbkey=CDS;product=7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=WP_002209379.1;transl_table=11
NC_017154.1	RefSeq	gene	3754280	3754885	.	-	.	ID=gene3472;Name=YPD4_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17410;old_locus_tag=YPD4_2959
NC_017154.1	Protein Homology	CDS	3754280	3754885	.	-	0	ID=cds3409;Parent=gene3472;Dbxref=Genbank:WP_002218050.1;Name=WP_002218050.1;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002218050.1;transl_table=11
NC_017154.1	RefSeq	gene	3755257	3756552	.	-	.	ID=gene3473;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=YPD4_RS17415;old_locus_tag=YPD4_2960
NC_017154.1	Protein Homology	CDS	3755257	3756552	.	-	0	ID=cds3410;Parent=gene3473;Dbxref=Genbank:WP_002209377.1;Name=WP_002209377.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_002209377.1;transl_table=11
NC_017154.1	RefSeq	gene	3756633	3758270	.	-	.	ID=gene3474;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=YPD4_RS17420;old_locus_tag=YPD4_2961
NC_017154.1	Protein Homology	CDS	3756633	3758270	.	-	0	ID=cds3411;Parent=gene3474;Dbxref=Genbank:WP_002209376.1;Name=WP_002209376.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_002209376.1;transl_table=11
NC_017154.1	RefSeq	gene	3758482	3759324	.	-	.	ID=gene3475;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=YPD4_RS17425;old_locus_tag=YPD4_2962
NC_017154.1	Protein Homology	CDS	3758482	3759324	.	-	0	ID=cds3412;Parent=gene3475;Dbxref=Genbank:WP_002209374.1;Name=WP_002209374.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002209374.1;transl_table=11
NC_017154.1	RefSeq	gene	3759331	3759489	.	-	.	ID=gene3476;Name=YPD4_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17430
NC_017154.1	Protein Homology	CDS	3759331	3759489	.	-	0	ID=cds3413;Parent=gene3476;Dbxref=Genbank:WP_002228225.1;Name=WP_002228225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228225.1;transl_table=11
NC_017154.1	RefSeq	gene	3759526	3761760	.	-	.	ID=gene3477;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=YPD4_RS17435;old_locus_tag=YPD4_2963
NC_017154.1	Protein Homology	CDS	3759526	3761760	.	-	0	ID=cds3414;Parent=gene3477;Dbxref=Genbank:WP_002209373.1;Name=WP_002209373.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=WP_002209373.1;transl_table=11
NC_017154.1	RefSeq	gene	3762204	3764987	.	+	.	ID=gene3478;Name=YPD4_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17440;old_locus_tag=YPD4_2964
NC_017154.1	Protein Homology	CDS	3762204	3764987	.	+	0	ID=cds3415;Parent=gene3478;Dbxref=Genbank:WP_002230018.1;Name=WP_002230018.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002230018.1;transl_table=11
NC_017154.1	RefSeq	gene	3765146	3766592	.	-	.	ID=gene3479;Name=YPD4_RS17445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS17445;pseudo=true
NC_017154.1	Protein Homology	CDS	3765146	3766592	.	-	0	ID=cds3416;Parent=gene3479;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;exception=annotated by transcript or proteomic data;gbkey=CDS;product=serine endoprotease;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3766790	3768310	.	-	.	ID=gene3480;Name=YPD4_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17450;old_locus_tag=YPD4_2967
NC_017154.1	Protein Homology	CDS	3766790	3768310	.	-	0	ID=cds3417;Parent=gene3480;Dbxref=Genbank:WP_002209369.1;Name=WP_002209369.1;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_002209369.1;transl_table=11
NC_017154.1	RefSeq	gene	3768604	3769305	.	+	.	ID=gene3481;Name=YPD4_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17455;old_locus_tag=YPD4_2968
NC_017154.1	Protein Homology	CDS	3768604	3769305	.	+	0	ID=cds3418;Parent=gene3481;Dbxref=Genbank:WP_002209368.1;Name=WP_002209368.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_002209368.1;transl_table=11
NC_017154.1	RefSeq	gene	3769305	3770148	.	+	.	ID=gene3482;Name=YPD4_RS17460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS17460;old_locus_tag=YPD4_2969;pseudo=true
NC_017154.1	Protein Homology	CDS	3769305	3770148	.	+	0	ID=cds3419;Parent=gene3482;exception=annotated by transcript or proteomic data;gbkey=CDS;product=Vitamin B12-binding protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3770148	3770762	.	+	.	ID=gene3483;Name=YPD4_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17465;old_locus_tag=YPD4_2970
NC_017154.1	Protein Homology	CDS	3770148	3770762	.	+	0	ID=cds3420;Parent=gene3483;Dbxref=Genbank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209366.1;transl_table=11
NC_017154.1	RefSeq	gene	3771047	3771391	.	-	.	ID=gene3484;Name=YPD4_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17470;old_locus_tag=YPD4_2971
NC_017154.1	Protein Homology	CDS	3771047	3771391	.	-	0	ID=cds3421;Parent=gene3484;Dbxref=Genbank:WP_002209365.1;Name=WP_002209365.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11
NC_017154.1	RefSeq	gene	3771527	3772963	.	-	.	ID=gene3485;Name=YPD4_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17475;old_locus_tag=YPD4_2972
NC_017154.1	Protein Homology	CDS	3771527	3772963	.	-	0	ID=cds3422;Parent=gene3485;Dbxref=Genbank:WP_002209364.1;Name=WP_002209364.1;gbkey=CDS;product=H+/Cl- exchange transporter ClcA;protein_id=WP_002209364.1;transl_table=11
NC_017154.1	RefSeq	gene	3773344	3774624	.	+	.	ID=gene3486;Name=YPD4_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17480;old_locus_tag=YPD4_2973
NC_017154.1	Protein Homology	CDS	3773344	3774624	.	+	0	ID=cds3423;Parent=gene3486;Dbxref=Genbank:WP_002209362.1;Name=WP_002209362.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002209362.1;transl_table=11
NC_017154.1	RefSeq	gene	3774998	3776995	.	-	.	ID=gene3487;Name=YPD4_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17485;old_locus_tag=YPD4_2974
NC_017154.1	Protein Homology	CDS	3774998	3776995	.	-	0	ID=cds3424;Parent=gene3487;Dbxref=Genbank:WP_002209361.1;Name=WP_002209361.1;gbkey=CDS;product=iron-hydroxamate transporter permease subunit;protein_id=WP_002209361.1;transl_table=11
NC_017154.1	RefSeq	gene	3776992	3777903	.	-	.	ID=gene3488;Name=YPD4_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17490;old_locus_tag=YPD4_2975
NC_017154.1	Protein Homology	CDS	3776992	3777903	.	-	0	ID=cds3425;Parent=gene3488;Dbxref=Genbank:WP_002209360.1;Name=WP_002209360.1;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=WP_002209360.1;transl_table=11
NC_017154.1	RefSeq	gene	3777897	3778124	.	+	.	ID=gene3489;Name=YPD4_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17495
NC_017154.1	Protein Homology	CDS	3777897	3778124	.	+	0	ID=cds3426;Parent=gene3489;Dbxref=Genbank:WP_002426047.1;Name=WP_002426047.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002426047.1;transl_table=11
NC_017154.1	RefSeq	gene	3778080	3778874	.	-	.	ID=gene3490;Name=YPD4_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17500;old_locus_tag=YPD4_2976
NC_017154.1	Protein Homology	CDS	3778080	3778874	.	-	0	ID=cds3427;Parent=gene3490;Dbxref=Genbank:WP_002209359.1;Name=WP_002209359.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding protein;protein_id=WP_002209359.1;transl_table=11
NC_017154.1	RefSeq	gene	3779195	3781669	.	-	.	ID=gene3491;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=YPD4_RS17505;old_locus_tag=YPD4_2977
NC_017154.1	Protein Homology	CDS	3779195	3781669	.	-	0	ID=cds3428;Parent=gene3491;Dbxref=Genbank:WP_002209358.1;Name=WP_002209358.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_002209358.1;transl_table=11
NC_017154.1	RefSeq	gene	3781778	3784339	.	-	.	ID=gene3492;Name=YPD4_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17510;old_locus_tag=YPD4_2978
NC_017154.1	Protein Homology	CDS	3781778	3784339	.	-	0	ID=cds3429;Parent=gene3492;Dbxref=Genbank:WP_002222096.1;Name=WP_002222096.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;gbkey=CDS;product=RNA helicase;protein_id=WP_002222096.1;transl_table=11
NC_017154.1	RefSeq	gene	3784380	3784955	.	+	.	ID=gene3493;Name=YPD4_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17515;old_locus_tag=YPD4_2979
NC_017154.1	Protein Homology	CDS	3784380	3784955	.	+	0	ID=cds3430;Parent=gene3493;Dbxref=Genbank:WP_002209356.1;Name=WP_002209356.1;gbkey=CDS;product=2'-5' RNA ligase;protein_id=WP_002209356.1;transl_table=11
NC_017154.1	RefSeq	gene	3785068	3785805	.	+	.	ID=gene3494;Name=YPD4_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17520;old_locus_tag=YPD4_2980
NC_017154.1	Protein Homology	CDS	3785068	3785805	.	+	0	ID=cds3431;Parent=gene3494;Dbxref=Genbank:WP_002228221.1;Name=WP_002228221.1;gbkey=CDS;product=sugar fermentation stimulation protein homolog;protein_id=WP_002228221.1;transl_table=11
NC_017154.1	RefSeq	gene	3785975	3786430	.	+	.	ID=gene3495;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=YPD4_RS17525
NC_017154.1	Protein Homology	CDS	3785975	3786430	.	+	0	ID=cds3432;Parent=gene3495;Dbxref=Genbank:WP_002209354.1;Name=WP_002209354.1;gbkey=CDS;gene=dksA;product=transcriptional regulator;protein_id=WP_002209354.1;transl_table=11
NC_017154.1	RefSeq	gene	3786710	3787675	.	+	.	ID=gene3496;Name=YPD4_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17530;old_locus_tag=YPD4_2982
NC_017154.1	Protein Homology	CDS	3786710	3787675	.	+	0	ID=cds3433;Parent=gene3496;Dbxref=Genbank:WP_002228220.1;Name=WP_002228220.1;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_002228220.1;transl_table=11
NC_017154.1	RefSeq	gene	3787818	3789239	.	+	.	ID=gene3497;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=YPD4_RS17535;old_locus_tag=YPD4_2983
NC_017154.1	Protein Homology	CDS	3787818	3789239	.	+	0	ID=cds3434;Parent=gene3497;Dbxref=Genbank:WP_032465644.1;Name=WP_032465644.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_032465644.1;transl_table=11
NC_017154.1	RefSeq	gene	3789247	3789726	.	+	.	ID=gene3498;Name=YPD4_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17540;old_locus_tag=YPD4_2984
NC_017154.1	Protein Homology	CDS	3789247	3789726	.	+	0	ID=cds3435;Parent=gene3498;Dbxref=Genbank:WP_002209351.1;Name=WP_002209351.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_002209351.1;transl_table=11
NC_017154.1	RefSeq	gene	3789995	3790792	.	+	.	ID=gene3499;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=YPD4_RS17545;old_locus_tag=YPD4_2985
NC_017154.1	Protein Homology	CDS	3789995	3790792	.	+	0	ID=cds3436;Parent=gene3499;Dbxref=Genbank:WP_002209349.1;Name=WP_002209349.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_002209349.1;transl_table=11
NC_017154.1	RefSeq	gene	3790880	3791734	.	+	.	ID=gene3500;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=YPD4_RS17550;old_locus_tag=YPD4_2986
NC_017154.1	Protein Homology	CDS	3790880	3791734	.	+	0	ID=cds3437;Parent=gene3500;Dbxref=Genbank:WP_002209348.1;Name=WP_002209348.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=WP_002209348.1;transl_table=11
NC_017154.1	RefSeq	gene	3792145	3792525	.	+	.	ID=gene3501;Name=YPD4_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17555;old_locus_tag=YPD4_2987
NC_017154.1	Protein Homology	CDS	3792145	3792525	.	+	0	ID=cds3438;Parent=gene3501;Dbxref=Genbank:WP_002209347.1;Name=WP_002209347.1;gbkey=CDS;product=aspartate 1-decarboxylase;protein_id=WP_002209347.1;transl_table=11
NC_017154.1	RefSeq	gene	3792674	3793988	.	-	.	ID=gene3502;Name=YPD4_RS17560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS17560;pseudo=true
NC_017154.1	Protein Homology	CDS	3792674	3793988	.	-	0	ID=cds3439;Parent=gene3502;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3794195	3794965	.	-	.	ID=gene3503;Name=YPD4_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17565;old_locus_tag=YPD4_2989
NC_017154.1	Protein Homology	CDS	3794195	3794965	.	-	0	ID=cds3440;Parent=gene3503;Dbxref=Genbank:WP_002209344.1;Name=WP_002209344.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209344.1;transl_table=11
NC_017154.1	RefSeq	gene	3794962	3795888	.	-	.	ID=gene3504;Name=YPD4_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17570;old_locus_tag=YPD4_2990
NC_017154.1	Protein Homology	CDS	3794962	3795888	.	-	0	ID=cds3441;Parent=gene3504;Dbxref=Genbank:WP_002209343.1;Name=WP_002209343.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209343.1;transl_table=11
NC_017154.1	RefSeq	gene	3796124	3796786	.	+	.	ID=gene3505;Name=YPD4_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17575;old_locus_tag=YPD4_2991
NC_017154.1	Protein Homology	CDS	3796124	3796786	.	+	0	ID=cds3442;Parent=gene3505;Dbxref=Genbank:WP_002209342.1;Name=WP_002209342.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002209342.1;transl_table=11
NC_017154.1	RefSeq	gene	3796940	3797476	.	-	.	ID=gene3506;Name=YPD4_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17580;old_locus_tag=YPD4_2992
NC_017154.1	Protein Homology	CDS	3796940	3797476	.	-	0	ID=cds3443;Parent=gene3506;Dbxref=Genbank:WP_002228216.1;Name=WP_002228216.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_002228216.1;transl_table=11
NC_017154.1	RefSeq	gene	3797696	3799297	.	-	.	ID=gene3507;Name=YPD4_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17585;old_locus_tag=YPD4_2993
NC_017154.1	Protein Homology	CDS	3797696	3799297	.	-	0	ID=cds3444;Parent=gene3507;Dbxref=Genbank:WP_002209340.1;Name=WP_002209340.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=blue copper oxidase CueO;protein_id=WP_002209340.1;transl_table=11
NC_017154.1	RefSeq	gene	3799614	3799961	.	+	.	ID=gene3508;Name=YPD4_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17590;old_locus_tag=YPD4_2994
NC_017154.1	Protein Homology	CDS	3799614	3799961	.	+	0	ID=cds3445;Parent=gene3508;Dbxref=Genbank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228215.1;transl_table=11
NC_017154.1	RefSeq	gene	3800078	3800968	.	+	.	ID=gene3509;Name=YPD4_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17595;old_locus_tag=YPD4_2995
NC_017154.1	Protein Homology	CDS	3800078	3800968	.	+	0	ID=cds3446;Parent=gene3509;Dbxref=Genbank:WP_002209338.1;Name=WP_002209338.1;gbkey=CDS;product=polyamine aminopropyltransferase;protein_id=WP_002209338.1;transl_table=11
NC_017154.1	RefSeq	gene	3801046	3801840	.	+	.	ID=gene3510;Name=YPD4_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17600;old_locus_tag=YPD4_2996
NC_017154.1	Protein Homology	CDS	3801046	3801840	.	+	0	ID=cds3447;Parent=gene3510;Dbxref=Genbank:WP_002209337.1;Name=WP_002209337.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=WP_002209337.1;transl_table=11
NC_017154.1	RefSeq	gene	3802278	3803186	.	+	.	ID=gene3511;Name=YPD4_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17605;old_locus_tag=YPD4_2997
NC_017154.1	Protein Homology	CDS	3802278	3803186	.	+	0	ID=cds3448;Parent=gene3511;Dbxref=Genbank:WP_002209335.1;Name=WP_002209335.1;gbkey=CDS;product=aromatic amino acid exporter;protein_id=WP_002209335.1;transl_table=11
NC_017154.1	RefSeq	gene	3803297	3803656	.	-	.	ID=gene3512;Name=YPD4_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17610;old_locus_tag=YPD4_2998
NC_017154.1	Protein Homology	CDS	3803297	3803656	.	-	0	ID=cds3449;Parent=gene3512;Dbxref=Genbank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209334.1;transl_table=11
NC_017154.1	RefSeq	gene	3803955	3806552	.	-	.	ID=gene3513;Name=YPD4_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17615;old_locus_tag=YPD4_2999
NC_017154.1	Protein Homology	CDS	3803955	3806552	.	-	0	ID=cds3450;Parent=gene3513;Dbxref=Genbank:WP_002209333.1;Name=WP_002209333.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3807010	3807734	.	+	.	ID=id283;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3807122	3807631	.	-	.	ID=gene3514;Name=YPD4_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17620;old_locus_tag=YPD4_3000
NC_017154.1	Protein Homology	CDS	3807122	3807631	.	-	0	ID=cds3451;Parent=gene3514;Dbxref=Genbank:WP_002208492.1;Name=WP_002208492.1;gbkey=CDS;product=transposase;protein_id=WP_002208492.1;transl_table=11
NC_017154.1	RefSeq	gene	3807570	3807725	.	-	.	ID=gene3515;Name=YPD4_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17625
NC_017154.1	Protein Homology	CDS	3807570	3807725	.	-	0	ID=cds3452;Parent=gene3515;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11
NC_017154.1	RefSeq	gene	3807823	3809247	.	-	.	ID=gene3516;Name=YPD4_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17630;old_locus_tag=YPD4_3001
NC_017154.1	Protein Homology	CDS	3807823	3809247	.	-	0	ID=cds3453;Parent=gene3516;Dbxref=Genbank:WP_002209332.1;Name=WP_002209332.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209332.1;transl_table=11
NC_017154.1	RefSeq	gene	3809553	3811082	.	-	.	ID=gene3517;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=YPD4_RS17635;old_locus_tag=YPD4_3002
NC_017154.1	Protein Homology	CDS	3809553	3811082	.	-	0	ID=cds3454;Parent=gene3517;Dbxref=Genbank:WP_002209330.1;Name=WP_002209330.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=WP_002209330.1;transl_table=11
NC_017154.1	RefSeq	gene	3811096	3813759	.	-	.	ID=gene3518;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=YPD4_RS17640;old_locus_tag=YPD4_3003
NC_017154.1	Protein Homology	CDS	3811096	3813759	.	-	0	ID=cds3455;Parent=gene3518;Dbxref=Genbank:WP_002209329.1;Name=WP_002209329.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_002209329.1;transl_table=11
NC_017154.1	RefSeq	gene	3813955	3814719	.	-	.	ID=gene3519;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=YPD4_RS17645;old_locus_tag=YPD4_3004
NC_017154.1	Protein Homology	CDS	3813955	3814719	.	-	0	ID=cds3456;Parent=gene3519;Dbxref=Genbank:WP_002216080.1;Name=WP_002216080.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator;protein_id=WP_002216080.1;transl_table=11
NC_017154.1	RefSeq	gene	3815582	3816979	.	+	.	ID=gene3520;Name=YPD4_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17650;old_locus_tag=YPD4_3005
NC_017154.1	Protein Homology	CDS	3815582	3816979	.	+	0	ID=cds3457;Parent=gene3520;Dbxref=Genbank:WP_002209327.1;Name=WP_002209327.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002209327.1;transl_table=11
NC_017154.1	RefSeq	gene	3817397	3818251	.	-	.	ID=gene3521;Name=YPD4_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17655;old_locus_tag=YPD4_3006
NC_017154.1	Protein Homology	CDS	3817397	3818251	.	-	0	ID=cds3458;Parent=gene3521;Dbxref=Genbank:WP_002209326.1;Name=WP_002209326.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209326.1;transl_table=11
NC_017154.1	RefSeq	gene	3818524	3819075	.	-	.	ID=gene3522;Name=YPD4_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17660;old_locus_tag=YPD4_3007
NC_017154.1	Protein Homology	CDS	3818524	3819075	.	-	0	ID=cds3459;Parent=gene3522;Dbxref=Genbank:WP_002209325.1;Name=WP_002209325.1;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=WP_002209325.1;transl_table=11
NC_017154.1	RefSeq	gene	3819188	3820096	.	+	.	ID=gene3523;Name=YPD4_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17665;old_locus_tag=YPD4_3008
NC_017154.1	Protein Homology	CDS	3819188	3820096	.	+	0	ID=cds3460;Parent=gene3523;Dbxref=Genbank:WP_002209324.1;Name=WP_002209324.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_002209324.1;transl_table=11
NC_017154.1	RefSeq	gene	3820299	3820763	.	+	.	ID=gene3524;Name=YPD4_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17670;old_locus_tag=YPD4_3009
NC_017154.1	Protein Homology	CDS	3820299	3820763	.	+	0	ID=cds3461;Parent=gene3524;Dbxref=Genbank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;product=major pilin subunit;protein_id=WP_002209323.1;transl_table=11
NC_017154.1	RefSeq	gene	3820756	3822294	.	+	.	ID=gene3525;Name=YPD4_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17675;old_locus_tag=YPD4_3010
NC_017154.1	Protein Homology	CDS	3820756	3822294	.	+	0	ID=cds3462;Parent=gene3525;Dbxref=Genbank:WP_002216083.1;Name=WP_002216083.1;gbkey=CDS;product=transporter HofB;protein_id=WP_002216083.1;transl_table=11
NC_017154.1	RefSeq	gene	3822291	3823490	.	+	.	ID=gene3526;Name=YPD4_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17680;old_locus_tag=YPD4_3011
NC_017154.1	Protein Homology	CDS	3822291	3823490	.	+	0	ID=cds3463;Parent=gene3526;Dbxref=Genbank:WP_002209321.1;Name=WP_002209321.1;gbkey=CDS;product=type II secretion protein F;protein_id=WP_002209321.1;transl_table=11
NC_017154.1	RefSeq	gene	3823885	3824928	.	-	.	ID=gene3527;Name=YPD4_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17685;old_locus_tag=YPD4_3012
NC_017154.1	Protein Homology	CDS	3823885	3824928	.	-	0	ID=cds3464;Parent=gene3527;Dbxref=Genbank:WP_002209320.1;Name=WP_002209320.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11
NC_017154.1	RefSeq	gene	3825014	3825214	.	+	.	ID=gene3528;Name=YPD4_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17690
NC_017154.1	Protein Homology	CDS	3825014	3825214	.	+	0	ID=cds3465;Parent=gene3528;Dbxref=Genbank:WP_002354912.1;Name=WP_002354912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354912.1;transl_table=11
NC_017154.1	RefSeq	gene	3825224	3825844	.	+	.	ID=gene3529;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=YPD4_RS17695;old_locus_tag=YPD4_3013
NC_017154.1	Protein Homology	CDS	3825224	3825844	.	+	0	ID=cds3466;Parent=gene3529;Dbxref=Genbank:WP_002209319.1;Name=WP_002209319.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_002209319.1;transl_table=11
NC_017154.1	RefSeq	gene	3825841	3826593	.	+	.	ID=gene3530;Name=YPD4_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17700;old_locus_tag=YPD4_3014
NC_017154.1	Protein Homology	CDS	3825841	3826593	.	+	0	ID=cds3467;Parent=gene3530;Dbxref=Genbank:WP_002209318.1;Name=WP_002209318.1;gbkey=CDS;product=cell division protein ZapD;protein_id=WP_002209318.1;transl_table=11
NC_017154.1	RefSeq	gene	3826779	3826985	.	+	.	ID=gene3531;Name=YPD4_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17705
NC_017154.1	Protein Homology	CDS	3826779	3826985	.	+	0	ID=cds3468;Parent=gene3531;Dbxref=Genbank:WP_002209317.1;Name=WP_002209317.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3827065	3829612	.	+	.	ID=id284;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3827175	3827687	.	-	.	ID=gene3532;Name=YPD4_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17710;old_locus_tag=YPD4_3015
NC_017154.1	Protein Homology	CDS	3827175	3827687	.	-	0	ID=cds3469;Parent=gene3532;Dbxref=Genbank:WP_002209316.1;Name=WP_002209316.1;gbkey=CDS;product=transposase;protein_id=WP_002209316.1;transl_table=11
NC_017154.1	RefSeq	gene	3827744	3828766	.	+	.	ID=gene3533;Name=YPD4_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17715;old_locus_tag=YPD4_3016
NC_017154.1	Protein Homology	CDS	3827744	3828766	.	+	0	ID=cds3470;Parent=gene3533;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	3828763	3829545	.	+	.	ID=gene3534;Name=YPD4_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17720;old_locus_tag=YPD4_3017
NC_017154.1	Protein Homology	CDS	3828763	3829545	.	+	0	ID=cds3471;Parent=gene3534;Dbxref=Genbank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;product=transposase;protein_id=WP_001317493.1;transl_table=11
NC_017154.1	RefSeq	gene	3829596	3830705	.	-	.	ID=gene3535;Name=YPD4_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17725;old_locus_tag=YPD4_3018
NC_017154.1	Protein Homology	CDS	3829596	3830705	.	-	0	ID=cds3472;Parent=gene3535;Dbxref=Genbank:WP_002209315.1;Name=WP_002209315.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209315.1;transl_table=11
NC_017154.1	RefSeq	gene	3830698	3832608	.	-	.	ID=gene3536;Name=YPD4_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17730;old_locus_tag=YPD4_3019
NC_017154.1	Protein Homology	CDS	3830698	3832608	.	-	0	ID=cds3473;Parent=gene3536;Dbxref=Genbank:WP_002209314.1;Name=WP_002209314.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209314.1;transl_table=11
NC_017154.1	RefSeq	gene	3832762	3834021	.	-	.	ID=gene3537;Name=YPD4_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17735;old_locus_tag=YPD4_3020
NC_017154.1	Protein Homology	CDS	3832762	3834021	.	-	0	ID=cds3474;Parent=gene3537;Dbxref=Genbank:WP_002209313.1;Name=WP_002209313.1;gbkey=CDS;product=integrase;protein_id=WP_002209313.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3834014	3834225	.	+	.	ID=id285;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3834220	3834304	.	-	.	ID=gene3538;Name=YPD4_RS17740;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS17740;old_locus_tag=YPD4_t50
NC_017154.1	tRNAscan-SE	tRNA	3834220	3834304	.	-	.	ID=rna58;Parent=gene3538;anticodon=(pos:complement(3834268..3834270));gbkey=tRNA;product=tRNA-Leu
NC_017154.1	tRNAscan-SE	exon	3834220	3834304	.	-	.	ID=id286;Parent=rna58;anticodon=(pos:complement(3834268..3834270));gbkey=tRNA;product=tRNA-Leu
NC_017154.1	RefSeq	gene	3834409	3835485	.	-	.	ID=gene3539;Name=YPD4_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17745;old_locus_tag=YPD4_3021
NC_017154.1	Protein Homology	CDS	3834409	3835485	.	-	0	ID=cds3475;Parent=gene3539;Dbxref=Genbank:WP_002223173.1;Name=WP_002223173.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_002223173.1;transl_table=11
NC_017154.1	RefSeq	gene	3835485	3836580	.	-	.	ID=gene3540;Name=YPD4_RS17750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS17750;pseudo=true
NC_017154.1	Protein Homology	CDS	3835485	3836580	.	-	0	ID=cds3476;Parent=gene3540;Note=with LptBGC is involved in lipopolysaccharide export;exception=annotated by transcript or proteomic data;gbkey=CDS;product=lipopolysaccharide ABC transporter permease;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3836860	3838371	.	+	.	ID=gene3541;Name=YPD4_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17755;old_locus_tag=YPD4_3024
NC_017154.1	Protein Homology	CDS	3836860	3838371	.	+	0	ID=cds3477;Parent=gene3541;Dbxref=Genbank:WP_002209310.1;Name=WP_002209310.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=cytosol aminopeptidase;protein_id=WP_002209310.1;transl_table=11
NC_017154.1	RefSeq	gene	3838522	3838971	.	+	.	ID=gene3542;Name=YPD4_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17760;old_locus_tag=YPD4_3025
NC_017154.1	Protein Homology	CDS	3838522	3838971	.	+	0	ID=cds3478;Parent=gene3542;Dbxref=Genbank:WP_002209309.1;Name=WP_002209309.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_002209309.1;transl_table=11
NC_017154.1	RefSeq	gene	3838984	3841881	.	+	.	ID=gene3543;Name=YPD4_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17765;old_locus_tag=YPD4_3026
NC_017154.1	Protein Homology	CDS	3838984	3841881	.	+	0	ID=cds3479;Parent=gene3543;Dbxref=Genbank:WP_002209307.1;Name=WP_002209307.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_002209307.1;transl_table=11
NC_017154.1	RefSeq	gene	3842024	3842527	.	+	.	ID=gene3544;Name=YPD4_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17770;old_locus_tag=YPD4_3027
NC_017154.1	Protein Homology	CDS	3842024	3842527	.	+	0	ID=cds3480;Parent=gene3544;Dbxref=Genbank:WP_002223170.1;Name=WP_002223170.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002223170.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3842579	3842990	.	+	.	ID=id287;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3843034	3843465	.	-	.	ID=gene3545;Name=YPD4_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17775;old_locus_tag=YPD4_3028
NC_017154.1	Protein Homology	CDS	3843034	3843465	.	-	0	ID=cds3481;Parent=gene3545;Dbxref=Genbank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;product=RNase E inhibitor protein;protein_id=WP_002209303.1;transl_table=11
NC_017154.1	RefSeq	gene	3843677	3844684	.	+	.	ID=gene3546;Name=YPD4_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17780;old_locus_tag=YPD4_3029
NC_017154.1	Protein Homology	CDS	3843677	3844684	.	+	0	ID=cds3482;Parent=gene3546;Dbxref=Genbank:WP_002209302.1;Name=WP_002209302.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_002209302.1;transl_table=11
NC_017154.1	RefSeq	gene	3844991	3845449	.	-	.	ID=gene3547;Name=YPD4_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17785;old_locus_tag=YPD4_3030
NC_017154.1	Protein Homology	CDS	3844991	3845449	.	-	0	ID=cds3483;Parent=gene3547;Dbxref=Genbank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209301.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3845723	3845892	.	+	.	ID=id288;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3846088	3847655	.	+	.	ID=gene3548;Name=YPD4_RS17790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS17790;pseudo=true
NC_017154.1	Protein Homology	CDS	3846088	3847655	.	+	0	ID=cds3484;Parent=gene3548;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3847751	3848800	.	+	.	ID=gene3549;Name=YPD4_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17795;old_locus_tag=YPD4_3033
NC_017154.1	Protein Homology	CDS	3847751	3848800	.	+	0	ID=cds3485;Parent=gene3549;Dbxref=Genbank:WP_002209300.1;Name=WP_002209300.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209300.1;transl_table=11
NC_017154.1	RefSeq	gene	3848819	3849655	.	+	.	ID=gene3550;Name=YPD4_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17800;old_locus_tag=YPD4_3034
NC_017154.1	Protein Homology	CDS	3848819	3849655	.	+	0	ID=cds3486;Parent=gene3550;Dbxref=Genbank:WP_002209299.1;Name=WP_002209299.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209299.1;transl_table=11
NC_017154.1	RefSeq	gene	3849648	3850526	.	+	.	ID=gene3551;Name=YPD4_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17805;old_locus_tag=YPD4_3035
NC_017154.1	Protein Homology	CDS	3849648	3850526	.	+	0	ID=cds3487;Parent=gene3551;Dbxref=Genbank:WP_002209298.1;Name=WP_002209298.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11
NC_017154.1	RefSeq	gene	3850513	3851229	.	+	.	ID=gene3552;Name=YPD4_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17810;old_locus_tag=YPD4_3036
NC_017154.1	Protein Homology	CDS	3850513	3851229	.	+	0	ID=cds3488;Parent=gene3552;Dbxref=Genbank:WP_002209297.1;Name=WP_002209297.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209297.1;transl_table=11
NC_017154.1	RefSeq	gene	3851663	3853801	.	+	.	ID=gene3553;Name=YPD4_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17815;old_locus_tag=YPD4_3037
NC_017154.1	Protein Homology	CDS	3851663	3853801	.	+	0	ID=cds3489;Parent=gene3553;Dbxref=Genbank:WP_015684021.1;Name=WP_015684021.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;product=ribonucleoside triphosphate reductase;protein_id=WP_015684021.1;transl_table=11
NC_017154.1	RefSeq	gene	3853978	3854442	.	+	.	ID=gene3554;Name=YPD4_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17820
NC_017154.1	Protein Homology	CDS	3853978	3854442	.	+	0	ID=cds3490;Parent=gene3554;Dbxref=Genbank:WP_025470743.1;Name=WP_025470743.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_025470743.1;transl_table=11
NC_017154.1	RefSeq	gene	3854770	3855495	.	+	.	ID=gene3555;Name=YPD4_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17825;old_locus_tag=YPD4_3039
NC_017154.1	Protein Homology	CDS	3854770	3855495	.	+	0	ID=cds3491;Parent=gene3555;Dbxref=Genbank:WP_002209293.1;Name=WP_002209293.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_002209293.1;transl_table=11
NC_017154.1	RefSeq	gene	3855496	3855972	.	+	.	ID=gene3556;Name=YPD4_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17830;old_locus_tag=YPD4_3040
NC_017154.1	Protein Homology	CDS	3855496	3855972	.	+	0	ID=cds3492;Parent=gene3556;Dbxref=Genbank:WP_002209292.1;Name=WP_002209292.1;gbkey=CDS;product=phosphonate metabolism protein PhnG;protein_id=WP_002209292.1;transl_table=11
NC_017154.1	RefSeq	gene	3855972	3856598	.	+	.	ID=gene3557;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=YPD4_RS17835;old_locus_tag=YPD4_3041
NC_017154.1	Protein Homology	CDS	3855972	3856598	.	+	0	ID=cds3493;Parent=gene3557;Dbxref=Genbank:WP_002209291.1;Name=WP_002209291.1;gbkey=CDS;gene=phnH;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_002209291.1;transl_table=11
NC_017154.1	RefSeq	gene	3856598	3857776	.	+	.	ID=gene3558;Name=YPD4_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17840;old_locus_tag=YPD4_3042
NC_017154.1	Protein Homology	CDS	3856598	3857776	.	+	0	ID=cds3494;Parent=gene3558;Dbxref=Genbank:WP_002209290.1;Name=WP_002209290.1;Note=required for the use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_002209290.1;transl_table=11
NC_017154.1	RefSeq	gene	3857769	3858650	.	+	.	ID=gene3559;Name=YPD4_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17845;old_locus_tag=YPD4_3043
NC_017154.1	Protein Homology	CDS	3857769	3858650	.	+	0	ID=cds3495;Parent=gene3559;Dbxref=Genbank:WP_002209289.1;Name=WP_002209289.1;Note=required for use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnJ;protein_id=WP_002209289.1;transl_table=11
NC_017154.1	RefSeq	gene	3858650	3859441	.	+	.	ID=gene3560;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=YPD4_RS17850;old_locus_tag=YPD4_3044
NC_017154.1	Protein Homology	CDS	3858650	3859441	.	+	0	ID=cds3496;Parent=gene3560;Dbxref=Genbank:WP_002209288.1;Name=WP_002209288.1;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase;protein_id=WP_002209288.1;transl_table=11
NC_017154.1	RefSeq	gene	3859830	3860549	.	+	.	ID=gene3561;Name=YPD4_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17855;old_locus_tag=YPD4_3045
NC_017154.1	Protein Homology	CDS	3859830	3860549	.	+	0	ID=cds3497;Parent=gene3561;Dbxref=Genbank:WP_002209287.1;Name=WP_002209287.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002209287.1;transl_table=11
NC_017154.1	RefSeq	gene	3860546	3861682	.	+	.	ID=gene3562;Name=YPD4_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17860;old_locus_tag=YPD4_3046
NC_017154.1	Protein Homology	CDS	3860546	3861682	.	+	0	ID=cds3498;Parent=gene3562;Dbxref=Genbank:WP_002209286.1;Name=WP_002209286.1;gbkey=CDS;product=phosphonate metabolism protein PhnM;protein_id=WP_002209286.1;transl_table=11
NC_017154.1	RefSeq	gene	3861682	3862263	.	+	.	ID=gene3563;Name=YPD4_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17865;old_locus_tag=YPD4_3047
NC_017154.1	Protein Homology	CDS	3861682	3862263	.	+	0	ID=cds3499;Parent=gene3563;Dbxref=Genbank:WP_002209285.1;Name=WP_002209285.1;gbkey=CDS;product=ribose 1%2C5-bisphosphate phosphokinase PhnN;protein_id=WP_002209285.1;transl_table=11
NC_017154.1	RefSeq	gene	3862254	3863006	.	+	.	ID=gene3564;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=YPD4_RS17870;old_locus_tag=YPD4_3048
NC_017154.1	Protein Homology	CDS	3862254	3863006	.	+	0	ID=cds3500;Parent=gene3564;Dbxref=Genbank:WP_002209284.1;Name=WP_002209284.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=phosphonate metabolism protein PhnP;protein_id=WP_002209284.1;transl_table=11
NC_017154.1	RefSeq	gene	3863019	3863657	.	-	.	ID=gene3565;Name=YPD4_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17875;old_locus_tag=YPD4_3049
NC_017154.1	Protein Homology	CDS	3863019	3863657	.	-	0	ID=cds3501;Parent=gene3565;Dbxref=Genbank:WP_002209283.1;Name=WP_002209283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209283.1;transl_table=11
NC_017154.1	RefSeq	gene	3863809	3864252	.	-	.	ID=gene3566;Name=YPD4_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17880;old_locus_tag=YPD4_3050
NC_017154.1	Protein Homology	CDS	3863809	3864252	.	-	0	ID=cds3502;Parent=gene3566;Dbxref=Genbank:WP_002209282.1;Name=WP_002209282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209282.1;transl_table=11
NC_017154.1	RefSeq	gene	3864351	3865517	.	-	.	ID=gene3567;Name=YPD4_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17885;old_locus_tag=YPD4_3051
NC_017154.1	Protein Homology	CDS	3864351	3865517	.	-	0	ID=cds3503;Parent=gene3567;Dbxref=Genbank:WP_002209281.1;Name=WP_002209281.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209281.1;transl_table=11
NC_017154.1	RefSeq	gene	3865532	3866626	.	-	.	ID=gene3568;Name=YPD4_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17890;old_locus_tag=YPD4_3052
NC_017154.1	Protein Homology	CDS	3865532	3866626	.	-	0	ID=cds3504;Parent=gene3568;Dbxref=Genbank:WP_002209280.1;Name=WP_002209280.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209280.1;transl_table=11
NC_017154.1	RefSeq	gene	3866638	3867477	.	-	.	ID=gene3569;Name=YPD4_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17895;old_locus_tag=YPD4_3053
NC_017154.1	Protein Homology	CDS	3866638	3867477	.	-	0	ID=cds3505;Parent=gene3569;Dbxref=Genbank:WP_002209279.1;Name=WP_002209279.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209279.1;transl_table=11
NC_017154.1	RefSeq	gene	3867496	3868380	.	-	.	ID=gene3570;Name=YPD4_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17900;old_locus_tag=YPD4_3054
NC_017154.1	Protein Homology	CDS	3867496	3868380	.	-	0	ID=cds3506;Parent=gene3570;Dbxref=Genbank:WP_002209278.1;Name=WP_002209278.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209278.1;transl_table=11
NC_017154.1	RefSeq	gene	3868388	3869701	.	-	.	ID=gene3571;Name=YPD4_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17905;old_locus_tag=YPD4_3055
NC_017154.1	Protein Homology	CDS	3868388	3869701	.	-	0	ID=cds3507;Parent=gene3571;Dbxref=Genbank:WP_002209277.1;Name=WP_002209277.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209277.1;transl_table=11
NC_017154.1	RefSeq	gene	3870262	3871485	.	+	.	ID=gene3572;Name=YPD4_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17910;old_locus_tag=YPD4_3056
NC_017154.1	Protein Homology	CDS	3870262	3871485	.	+	0	ID=cds3508;Parent=gene3572;Dbxref=Genbank:WP_002209276.1;Name=WP_002209276.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209276.1;transl_table=11
NC_017154.1	RefSeq	gene	3871509	3873527	.	+	.	ID=gene3573;Name=YPD4_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17915;old_locus_tag=YPD4_3057
NC_017154.1	Protein Homology	CDS	3871509	3873527	.	+	0	ID=cds3509;Parent=gene3573;Dbxref=Genbank:WP_002209275.1;Name=WP_002209275.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209275.1;transl_table=11
NC_017154.1	RefSeq	gene	3873758	3874045	.	+	.	ID=gene3574;Name=YPD4_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17920
NC_017154.1	Protein Homology	CDS	3873758	3874045	.	+	0	ID=cds3510;Parent=gene3574;Dbxref=Genbank:WP_002209274.1;Name=WP_002209274.1;gbkey=CDS;product=nuclease;protein_id=WP_002209274.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3874012	3874143	.	+	.	ID=id289;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3874220	3874726	.	-	.	ID=gene3575;Name=YPD4_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17925;old_locus_tag=YPD4_3058
NC_017154.1	Protein Homology	CDS	3874220	3874726	.	-	0	ID=cds3511;Parent=gene3575;Dbxref=Genbank:WP_002209273.1;Name=WP_002209273.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209273.1;transl_table=11
NC_017154.1	RefSeq	gene	3874720	3875241	.	-	.	ID=gene3576;Name=YPD4_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17930;old_locus_tag=YPD4_3059
NC_017154.1	Protein Homology	CDS	3874720	3875241	.	-	0	ID=cds3512;Parent=gene3576;Dbxref=Genbank:WP_002209272.1;Name=WP_002209272.1;gbkey=CDS;product=SCP-2 sterol transfer family protein;protein_id=WP_002209272.1;transl_table=11
NC_017154.1	RefSeq	gene	3875322	3875447	.	+	.	ID=gene3577;Name=YPD4_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17935
NC_017154.1	Protein Homology	CDS	3875322	3875447	.	+	0	ID=cds3513;Parent=gene3577;Dbxref=Genbank:WP_002209271.1;Name=WP_002209271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209271.1;transl_table=11
NC_017154.1	RefSeq	gene	3875557	3876552	.	+	.	ID=gene3578;Name=YPD4_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17940;old_locus_tag=YPD4_3060
NC_017154.1	Protein Homology	CDS	3875557	3876552	.	+	0	ID=cds3514;Parent=gene3578;Dbxref=Genbank:WP_002209270.1;Name=WP_002209270.1;gbkey=CDS;product=protease;protein_id=WP_002209270.1;transl_table=11
NC_017154.1	RefSeq	gene	3876564	3877442	.	+	.	ID=gene3579;Name=YPD4_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17945;old_locus_tag=YPD4_3061
NC_017154.1	Protein Homology	CDS	3876564	3877442	.	+	0	ID=cds3515;Parent=gene3579;Dbxref=Genbank:WP_002209269.1;Name=WP_002209269.1;gbkey=CDS;product=protease;protein_id=WP_002209269.1;transl_table=11
NC_017154.1	RefSeq	gene	3877583	3878989	.	-	.	ID=gene3580;Name=YPD4_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17950;old_locus_tag=YPD4_3062
NC_017154.1	Protein Homology	CDS	3877583	3878989	.	-	0	ID=cds3516;Parent=gene3580;Dbxref=Genbank:WP_002209268.1;Name=WP_002209268.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002209268.1;transl_table=11
NC_017154.1	RefSeq	gene	3878991	3882116	.	-	.	ID=gene3581;Name=YPD4_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17955;old_locus_tag=YPD4_3063
NC_017154.1	Protein Homology	CDS	3878991	3882116	.	-	0	ID=cds3517;Parent=gene3581;Dbxref=Genbank:WP_002209267.1;Name=WP_002209267.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002209267.1;transl_table=11
NC_017154.1	RefSeq	gene	3882120	3883280	.	-	.	ID=gene3582;Name=YPD4_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17960;old_locus_tag=YPD4_3064
NC_017154.1	Protein Homology	CDS	3882120	3883280	.	-	0	ID=cds3518;Parent=gene3582;Dbxref=Genbank:WP_002209266.1;Name=WP_002209266.1;gbkey=CDS;product=acriflavine resistance protein E;protein_id=WP_002209266.1;transl_table=11
NC_017154.1	RefSeq	gene	3883788	3884843	.	+	.	ID=gene3583;Name=YPD4_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17965;old_locus_tag=YPD4_3065
NC_017154.1	Protein Homology	CDS	3883788	3884843	.	+	0	ID=cds3519;Parent=gene3583;Dbxref=Genbank:WP_002214817.1;Name=WP_002214817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214817.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3884896	3885067	.	+	.	ID=id290;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3885098	3885409	.	-	.	ID=gene3584;Name=YPD4_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17970;old_locus_tag=YPD4_3066
NC_017154.1	Protein Homology	CDS	3885098	3885409	.	-	0	ID=cds3520;Parent=gene3584;Dbxref=Genbank:WP_002209263.1;Name=WP_002209263.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209263.1;transl_table=11
NC_017154.1	RefSeq	gene	3885433	3885801	.	-	.	ID=gene3585;Name=YPD4_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17975
NC_017154.1	Protein Homology	CDS	3885433	3885801	.	-	0	ID=cds3521;Parent=gene3585;Dbxref=Genbank:WP_002214818.1;Name=WP_002214818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214818.1;transl_table=11
NC_017154.1	RefSeq	gene	3885844	3886017	.	-	.	ID=gene3586;Name=YPD4_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17980
NC_017154.1	Protein Homology	CDS	3885844	3886017	.	-	0	ID=cds3522;Parent=gene3586;Dbxref=Genbank:WP_002209262.1;Name=WP_002209262.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209262.1;transl_table=11
NC_017154.1	RefSeq	gene	3886037	3888031	.	-	.	ID=gene3587;Name=YPD4_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17985;old_locus_tag=YPD4_3067
NC_017154.1	Protein Homology	CDS	3886037	3888031	.	-	0	ID=cds3523;Parent=gene3587;Dbxref=Genbank:WP_002209261.1;Name=WP_002209261.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;product=DEAD/DEAH box family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11
NC_017154.1	RefSeq	gene	3888218	3889102	.	-	.	ID=gene3588;Name=YPD4_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17990;old_locus_tag=YPD4_3068
NC_017154.1	Protein Homology	CDS	3888218	3889102	.	-	0	ID=cds3524;Parent=gene3588;Dbxref=Genbank:WP_002209260.1;Name=WP_002209260.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11
NC_017154.1	RefSeq	gene	3889227	3891344	.	-	.	ID=gene3589;Name=YPD4_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS17995;old_locus_tag=YPD4_3069
NC_017154.1	Protein Homology	CDS	3889227	3891344	.	-	0	ID=cds3525;Parent=gene3589;Dbxref=Genbank:WP_002209259.1;Name=WP_002209259.1;gbkey=CDS;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002209259.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3891579	3893021	.	+	.	ID=id291;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3891611	3892396	.	-	.	ID=gene3590;Name=YPD4_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18000;old_locus_tag=YPD4_3070
NC_017154.1	Protein Homology	CDS	3891611	3892396	.	-	0	ID=cds3526;Parent=gene3590;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11
NC_017154.1	RefSeq	gene	3892450	3892965	.	-	.	ID=gene3591;Name=YPD4_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18005;old_locus_tag=YPD4_3071
NC_017154.1	Protein Homology	CDS	3892450	3892965	.	-	0	ID=cds3527;Parent=gene3591;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11
NC_017154.1	RefSeq	gene	3893016	3893759	.	+	.	ID=gene3592;Name=YPD4_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18010;old_locus_tag=YPD4_3072
NC_017154.1	Protein Homology	CDS	3893016	3893759	.	+	0	ID=cds3528;Parent=gene3592;Dbxref=Genbank:WP_002228704.1;Name=WP_002228704.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002228704.1;transl_table=11
NC_017154.1	RefSeq	gene	3893723	3894811	.	+	.	ID=gene3593;Name=YPD4_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18015;old_locus_tag=YPD4_3073
NC_017154.1	Protein Homology	CDS	3893723	3894811	.	+	0	ID=cds3529;Parent=gene3593;Dbxref=Genbank:WP_002213885.1;Name=WP_002213885.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002213885.1;transl_table=11
NC_017154.1	RefSeq	gene	3894937	3896253	.	+	.	ID=gene3594;Name=YPD4_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18020;old_locus_tag=YPD4_3074
NC_017154.1	Protein Homology	CDS	3894937	3896253	.	+	0	ID=cds3530;Parent=gene3594;Dbxref=Genbank:WP_002212103.1;Name=WP_002212103.1;gbkey=CDS;product=phosphopeptide-binding protein;protein_id=WP_002212103.1;transl_table=11
NC_017154.1	RefSeq	gene	3896253	3896798	.	+	.	ID=gene3595;Name=YPD4_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18025;old_locus_tag=YPD4_3075
NC_017154.1	Protein Homology	CDS	3896253	3896798	.	+	0	ID=cds3531;Parent=gene3595;Dbxref=Genbank:WP_002212104.1;Name=WP_002212104.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002212104.1;transl_table=11
NC_017154.1	RefSeq	gene	3896801	3898147	.	+	.	ID=gene3596;Name=YPD4_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18030;old_locus_tag=YPD4_3076
NC_017154.1	Protein Homology	CDS	3896801	3898147	.	+	0	ID=cds3532;Parent=gene3596;Dbxref=Genbank:WP_002212105.1;Name=WP_002212105.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212105.1;transl_table=11
NC_017154.1	RefSeq	gene	3898162	3898914	.	+	.	ID=gene3597;Name=YPD4_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18035;old_locus_tag=YPD4_3077
NC_017154.1	Protein Homology	CDS	3898162	3898914	.	+	0	ID=cds3533;Parent=gene3597;Dbxref=Genbank:WP_002355154.1;Name=WP_002355154.1;gbkey=CDS;product=chemotaxis protein MotB;protein_id=WP_002355154.1;transl_table=11
NC_017154.1	RefSeq	gene	3898925	3901528	.	+	.	ID=gene3598;Name=YPD4_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18040;old_locus_tag=YPD4_3078
NC_017154.1	Protein Homology	CDS	3898925	3901528	.	+	0	ID=cds3534;Parent=gene3598;Dbxref=Genbank:WP_002212107.1;Name=WP_002212107.1;gbkey=CDS;product=ATP-dependent Clp protease ClpV;protein_id=WP_002212107.1;transl_table=11
NC_017154.1	RefSeq	gene	3901525	3902322	.	+	.	ID=gene3599;Name=YPD4_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18045;old_locus_tag=YPD4_3079
NC_017154.1	Protein Homology	CDS	3901525	3902322	.	+	0	ID=cds3535;Parent=gene3599;Dbxref=Genbank:WP_002212108.1;Name=WP_002212108.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002212108.1;transl_table=11
NC_017154.1	RefSeq	gene	3902319	3903005	.	+	.	ID=gene3600;Name=YPD4_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18050;old_locus_tag=YPD4_3080
NC_017154.1	Protein Homology	CDS	3902319	3903005	.	+	0	ID=cds3536;Parent=gene3600;Dbxref=Genbank:WP_002212109.1;Name=WP_002212109.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212109.1;transl_table=11
NC_017154.1	RefSeq	gene	3903011	3904399	.	+	.	ID=gene3601;Name=YPD4_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18055;old_locus_tag=YPD4_3081
NC_017154.1	Protein Homology	CDS	3903011	3904399	.	+	0	ID=cds3537;Parent=gene3601;Dbxref=Genbank:WP_002212110.1;Name=WP_002212110.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212110.1;transl_table=11
NC_017154.1	RefSeq	gene	3904431	3907964	.	+	.	ID=gene3602;Name=YPD4_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18060;old_locus_tag=YPD4_3082
NC_017154.1	Protein Homology	CDS	3904431	3907964	.	+	0	ID=cds3538;Parent=gene3602;Dbxref=Genbank:WP_002212111.1;Name=WP_002212111.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_002212111.1;transl_table=11
NC_017154.1	RefSeq	gene	3908089	3908871	.	+	.	ID=gene3603;Name=YPD4_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18065;old_locus_tag=YPD4_3083
NC_017154.1	Protein Homology	CDS	3908089	3908871	.	+	0	ID=cds3539;Parent=gene3603;Dbxref=Genbank:WP_002213880.1;Name=WP_002213880.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213880.1;transl_table=11
NC_017154.1	RefSeq	gene	3908868	3909401	.	+	.	ID=gene3604;Name=YPD4_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18070;old_locus_tag=YPD4_3084
NC_017154.1	Protein Homology	CDS	3908868	3909401	.	+	0	ID=cds3540;Parent=gene3604;Dbxref=Genbank:WP_002213878.1;Name=WP_002213878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213878.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3909169	3909666	.	+	.	ID=id292;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3909423	3911825	.	+	.	ID=gene3605;Name=YPD4_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18075;old_locus_tag=YPD4_3085
NC_017154.1	Protein Homology	CDS	3909423	3911825	.	+	0	ID=cds3541;Parent=gene3605;Dbxref=Genbank:WP_002213876.1;Name=WP_002213876.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002213876.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3909690	3911421	.	+	.	ID=id293;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3911831	3912289	.	+	.	ID=gene3606;Name=YPD4_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18080;old_locus_tag=YPD4_3086
NC_017154.1	Protein Homology	CDS	3911831	3912289	.	+	0	ID=cds3542;Parent=gene3606;Dbxref=Genbank:WP_002213383.1;Name=WP_002213383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213383.1;transl_table=11
NC_017154.1	RefSeq	gene	3912282	3915146	.	+	.	ID=gene3607;Name=YPD4_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18085;old_locus_tag=YPD4_3087
NC_017154.1	Protein Homology	CDS	3912282	3915146	.	+	0	ID=cds3543;Parent=gene3607;Dbxref=Genbank:WP_002213873.1;Name=WP_002213873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213873.1;transl_table=11
NC_017154.1	RefSeq	gene	3915174	3916544	.	+	.	ID=gene3608;Name=YPD4_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18090;old_locus_tag=YPD4_3088
NC_017154.1	Protein Homology	CDS	3915174	3916544	.	+	0	ID=cds3544;Parent=gene3608;Dbxref=Genbank:WP_002213871.1;Name=WP_002213871.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002213871.1;transl_table=11
NC_017154.1	RefSeq	gene	3916546	3917031	.	+	.	ID=gene3609;Name=YPD4_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18095;old_locus_tag=YPD4_3089
NC_017154.1	Protein Homology	CDS	3916546	3917031	.	+	0	ID=cds3545;Parent=gene3609;Dbxref=Genbank:WP_002213869.1;Name=WP_002213869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213869.1;transl_table=11
NC_017154.1	RefSeq	gene	3917081	3917224	.	-	.	ID=gene3610;Name=YPD4_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18100
NC_017154.1	Protein Homology	CDS	3917081	3917224	.	-	0	ID=cds3546;Parent=gene3610;Dbxref=Genbank:WP_002210017.1;Name=WP_002210017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210017.1;transl_table=11
NC_017154.1	RefSeq	gene	3917348	3917572	.	-	.	ID=gene3611;Name=YPD4_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18105
NC_017154.1	Protein Homology	CDS	3917348	3917572	.	-	0	ID=cds3547;Parent=gene3611;Dbxref=Genbank:WP_002213866.1;Name=WP_002213866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213866.1;transl_table=11
NC_017154.1	RefSeq	gene	3917654	3918061	.	-	.	ID=gene3612;Name=YPD4_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18110;old_locus_tag=YPD4_3090
NC_017154.1	Protein Homology	CDS	3917654	3918061	.	-	0	ID=cds3548;Parent=gene3612;Dbxref=Genbank:WP_002210018.1;Name=WP_002210018.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210018.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3918168	3920240	.	+	.	ID=id294;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3918422	3920620	.	+	.	ID=gene3613;Name=YPD4_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18120;old_locus_tag=YPD4_3091
NC_017154.1	Protein Homology	CDS	3918422	3920620	.	+	0	ID=cds3549;Parent=gene3613;Dbxref=Genbank:WP_002210020.1;Name=WP_002210020.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002210020.1;transl_table=11
NC_017154.1	RefSeq	gene	3920623	3921045	.	+	.	ID=gene3614;Name=YPD4_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18125;old_locus_tag=YPD4_3092
NC_017154.1	Protein Homology	CDS	3920623	3921045	.	+	0	ID=cds3550;Parent=gene3614;Dbxref=Genbank:WP_002213861.1;Name=WP_002213861.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213861.1;transl_table=11
NC_017154.1	RefSeq	gene	3921090	3925628	.	+	.	ID=gene3615;Name=YPD4_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18130;old_locus_tag=YPD4_3093
NC_017154.1	Protein Homology	CDS	3921090	3925628	.	+	0	ID=cds3551;Parent=gene3615;Dbxref=Genbank:WP_015684022.1;Name=WP_015684022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015684022.1;transl_table=11
NC_017154.1	RefSeq	gene	3925637	3926431	.	+	.	ID=gene3616;Name=YPD4_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18135;old_locus_tag=YPD4_3094
NC_017154.1	Protein Homology	CDS	3925637	3926431	.	+	0	ID=cds3552;Parent=gene3616;Dbxref=Genbank:WP_002210023.1;Name=WP_002210023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210023.1;transl_table=11
NC_017154.1	RefSeq	gene	3926778	3927677	.	-	.	ID=gene3617;Name=YPD4_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18140;old_locus_tag=YPD4_3095
NC_017154.1	Protein Homology	CDS	3926778	3927677	.	-	0	ID=cds3553;Parent=gene3617;Dbxref=Genbank:WP_002210024.1;Name=WP_002210024.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210024.1;transl_table=11
NC_017154.1	RefSeq	gene	3927674	3928804	.	-	.	ID=gene3618;Name=YPD4_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18145;old_locus_tag=YPD4_3096
NC_017154.1	Protein Homology	CDS	3927674	3928804	.	-	0	ID=cds3554;Parent=gene3618;Dbxref=Genbank:WP_002210025.1;Name=WP_002210025.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210025.1;transl_table=11
NC_017154.1	RefSeq	gene	3929074	3929940	.	+	.	ID=gene3619;Name=YPD4_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18150;old_locus_tag=YPD4_3097
NC_017154.1	Protein Homology	CDS	3929074	3929940	.	+	0	ID=cds3555;Parent=gene3619;Dbxref=Genbank:WP_002210026.1;Name=WP_002210026.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210026.1;transl_table=11
NC_017154.1	RefSeq	gene	3930102	3930605	.	-	.	ID=gene3620;Name=YPD4_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18155;old_locus_tag=YPD4_3098
NC_017154.1	Protein Homology	CDS	3930102	3930605	.	-	0	ID=cds3556;Parent=gene3620;Dbxref=Genbank:WP_002210027.1;Name=WP_002210027.1;gbkey=CDS;product=carbohydrate transporter;protein_id=WP_002210027.1;transl_table=11
NC_017154.1	RefSeq	gene	3930611	3931540	.	-	.	ID=gene3621;Name=YPD4_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18160;old_locus_tag=YPD4_3099
NC_017154.1	Protein Homology	CDS	3930611	3931540	.	-	0	ID=cds3557;Parent=gene3621;Dbxref=Genbank:WP_002210028.1;Name=WP_002210028.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002210028.1;transl_table=11
NC_017154.1	RefSeq	gene	3931697	3932398	.	-	.	ID=gene3622;Name=YPD4_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18165;old_locus_tag=YPD4_3100
NC_017154.1	Protein Homology	CDS	3931697	3932398	.	-	0	ID=cds3558;Parent=gene3622;Dbxref=Genbank:WP_002210030.1;Name=WP_002210030.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002210030.1;transl_table=11
NC_017154.1	RefSeq	gene	3932869	3933450	.	+	.	ID=gene3623;Name=YPD4_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18170;old_locus_tag=YPD4_3101
NC_017154.1	Protein Homology	CDS	3932869	3933450	.	+	0	ID=cds3559;Parent=gene3623;Dbxref=Genbank:WP_002210032.1;Name=WP_002210032.1;gbkey=CDS;product=FMN reductase;protein_id=WP_002210032.1;transl_table=11
NC_017154.1	RefSeq	gene	3933465	3934601	.	+	.	ID=gene3624;Name=YPD4_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18175;old_locus_tag=YPD4_3102
NC_017154.1	Protein Homology	CDS	3933465	3934601	.	+	0	ID=cds3560;Parent=gene3624;Dbxref=Genbank:WP_002220949.1;Name=WP_002220949.1;gbkey=CDS;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_002220949.1;transl_table=11
NC_017154.1	RefSeq	gene	3934620	3935768	.	+	.	ID=gene3625;Name=YPD4_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18180;old_locus_tag=YPD4_3103
NC_017154.1	Protein Homology	CDS	3934620	3935768	.	+	0	ID=cds3561;Parent=gene3625;Dbxref=Genbank:WP_002210034.1;Name=WP_002210034.1;Note=catalyzes the release of sulfite from alkanesulfonates;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=WP_002210034.1;transl_table=11
NC_017154.1	RefSeq	gene	3935780	3936574	.	+	.	ID=gene3626;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=YPD4_RS18185;old_locus_tag=YPD4_3104
NC_017154.1	Protein Homology	CDS	3935780	3936574	.	+	0	ID=cds3562;Parent=gene3626;Dbxref=Genbank:WP_002213853.1;Name=WP_002213853.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=sulfonate ABC transporter;protein_id=WP_002213853.1;transl_table=11
NC_017154.1	RefSeq	gene	3936571	3937386	.	+	.	ID=gene3627;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=YPD4_RS18190;old_locus_tag=YPD4_3105
NC_017154.1	Protein Homology	CDS	3936571	3937386	.	+	0	ID=cds3563;Parent=gene3627;Dbxref=Genbank:WP_002210036.1;Name=WP_002210036.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATP-binding protein;protein_id=WP_002210036.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3937760	3937927	.	+	.	ID=id295;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3938005	3938208	.	-	.	ID=gene3628;Name=YPD4_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18195
NC_017154.1	Protein Homology	CDS	3938005	3938208	.	-	0	ID=cds3564;Parent=gene3628;Dbxref=Genbank:WP_002210038.1;Name=WP_002210038.1;gbkey=CDS;product=DNA-damage-inducible protein J;protein_id=WP_002210038.1;transl_table=11
NC_017154.1	RefSeq	gene	3938662	3940017	.	+	.	ID=gene3629;Name=YPD4_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18200;old_locus_tag=YPD4_3106
NC_017154.1	Protein Homology	CDS	3938662	3940017	.	+	0	ID=cds3565;Parent=gene3629;Dbxref=Genbank:WP_002210039.1;Name=WP_002210039.1;gbkey=CDS;product=xanthine/uracil permease;protein_id=WP_002210039.1;transl_table=11
NC_017154.1	RefSeq	gene	3940366	3942015	.	+	.	ID=gene3630;Name=YPD4_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18205;old_locus_tag=YPD4_3107
NC_017154.1	Protein Homology	CDS	3940366	3942015	.	+	0	ID=cds3566;Parent=gene3630;Dbxref=Genbank:WP_002215816.1;Name=WP_002215816.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002215816.1;transl_table=11
NC_017154.1	RefSeq	gene	3942233	3943420	.	-	.	ID=gene3631;Name=YPD4_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18210;old_locus_tag=YPD4_3108
NC_017154.1	Protein Homology	CDS	3942233	3943420	.	-	0	ID=cds3567;Parent=gene3631;Dbxref=Genbank:WP_002210041.1;Name=WP_002210041.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210041.1;transl_table=11
NC_017154.1	RefSeq	gene	3943572	3944492	.	-	.	ID=gene3632;Name=YPD4_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18215;old_locus_tag=YPD4_3109
NC_017154.1	Protein Homology	CDS	3943572	3944492	.	-	0	ID=cds3568;Parent=gene3632;Dbxref=Genbank:WP_002210042.1;Name=WP_002210042.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=WP_002210042.1;transl_table=11
NC_017154.1	RefSeq	gene	3945286	3946275	.	+	.	ID=gene3633;Name=YPD4_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18220;old_locus_tag=YPD4_3110
NC_017154.1	Protein Homology	CDS	3945286	3946275	.	+	0	ID=cds3569;Parent=gene3633;Dbxref=Genbank:WP_002210043.1;Name=WP_002210043.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210043.1;transl_table=11
NC_017154.1	RefSeq	gene	3946479	3947975	.	+	.	ID=gene3634;Name=YPD4_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18225;old_locus_tag=YPD4_3111
NC_017154.1	Protein Homology	CDS	3946479	3947975	.	+	0	ID=cds3570;Parent=gene3634;Dbxref=Genbank:WP_002210044.1;Name=WP_002210044.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210044.1;transl_table=11
NC_017154.1	RefSeq	gene	3947968	3948957	.	+	.	ID=gene3635;Name=YPD4_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18230;old_locus_tag=YPD4_3112
NC_017154.1	Protein Homology	CDS	3947968	3948957	.	+	0	ID=cds3571;Parent=gene3635;Dbxref=Genbank:WP_002210045.1;Name=WP_002210045.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210045.1;transl_table=11
NC_017154.1	RefSeq	gene	3948959	3949912	.	+	.	ID=gene3636;Name=YPD4_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18235;old_locus_tag=YPD4_3113
NC_017154.1	Protein Homology	CDS	3948959	3949912	.	+	0	ID=cds3572;Parent=gene3636;Dbxref=Genbank:WP_002210046.1;Name=WP_002210046.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210046.1;transl_table=11
NC_017154.1	RefSeq	gene	3949931	3951568	.	+	.	ID=gene3637;Name=YPD4_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18240;old_locus_tag=YPD4_3114
NC_017154.1	Protein Homology	CDS	3949931	3951568	.	+	0	ID=cds3573;Parent=gene3637;Dbxref=Genbank:WP_002210047.1;Name=WP_002210047.1;gbkey=CDS;product=ribulokinase;protein_id=WP_002210047.1;transl_table=11
NC_017154.1	RefSeq	gene	3951565	3952170	.	+	.	ID=gene3638;Name=YPD4_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18245;old_locus_tag=YPD4_3115
NC_017154.1	Protein Homology	CDS	3951565	3952170	.	+	0	ID=cds3574;Parent=gene3638;Dbxref=Genbank:WP_002210048.1;Name=WP_002210048.1;gbkey=CDS;product=phosphosugar isomerase;protein_id=WP_002210048.1;transl_table=11
NC_017154.1	RefSeq	gene	3952360	3953211	.	-	.	ID=gene3639;Name=YPD4_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18250;old_locus_tag=YPD4_3116
NC_017154.1	Protein Homology	CDS	3952360	3953211	.	-	0	ID=cds3575;Parent=gene3639;Dbxref=Genbank:WP_002228699.1;Name=WP_002228699.1;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli;gbkey=CDS;product=S-transferase;protein_id=WP_002228699.1;transl_table=11
NC_017154.1	RefSeq	gene	3953465	3954811	.	+	.	ID=gene3640;Name=YPD4_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18255;old_locus_tag=YPD4_3117
NC_017154.1	Protein Homology	CDS	3953465	3954811	.	+	0	ID=cds3576;Parent=gene3640;Dbxref=Genbank:WP_002210050.1;Name=WP_002210050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210050.1;transl_table=11
NC_017154.1	RefSeq	gene	3954918	3956093	.	-	.	ID=gene3641;Name=YPD4_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18260;old_locus_tag=YPD4_3118
NC_017154.1	Protein Homology	CDS	3954918	3956093	.	-	0	ID=cds3577;Parent=gene3641;Dbxref=Genbank:WP_002210051.1;Name=WP_002210051.1;gbkey=CDS;product=DNA repair ATPase;protein_id=WP_002210051.1;transl_table=11
NC_017154.1	RefSeq	gene	3956332	3956508	.	+	.	ID=gene3642;Name=YPD4_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18265
NC_017154.1	Protein Homology	CDS	3956332	3956508	.	+	0	ID=cds3578;Parent=gene3642;Dbxref=Genbank:WP_025470774.1;Name=WP_025470774.1;gbkey=CDS;product=transposase;protein_id=WP_025470774.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3956349	3957066	.	+	.	ID=id296;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3956447	3956956	.	+	.	ID=gene3643;Name=YPD4_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18270;old_locus_tag=YPD4_3119
NC_017154.1	Protein Homology	CDS	3956447	3956956	.	+	0	ID=cds3579;Parent=gene3643;Dbxref=Genbank:WP_002208492.1;Name=WP_002208492.1;gbkey=CDS;product=transposase;protein_id=WP_002208492.1;transl_table=11
NC_017154.1	cmsearch	region	3957112	3957525	.	-	.	ID=id297;Note=cspA;gbkey=misc_feature
NC_017154.1	RefSeq	gene	3957139	3957351	.	-	.	ID=gene3644;Name=YPD4_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18275
NC_017154.1	Protein Homology	CDS	3957139	3957351	.	-	0	ID=cds3580;Parent=gene3644;Dbxref=Genbank:WP_002210052.1;Name=WP_002210052.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210052.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3957167	3957369	.	+	.	ID=id298;gbkey=repeat_region
NC_017154.1	cmsearch	region	3957560	3958002	.	-	.	ID=id299;Note=cspA;gbkey=misc_feature
NC_017154.1	RefSeq	gene	3957611	3957823	.	-	.	ID=gene3645;Name=YPD4_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18280
NC_017154.1	Protein Homology	CDS	3957611	3957823	.	-	0	ID=cds3581;Parent=gene3645;Dbxref=Genbank:WP_002210053.1;Name=WP_002210053.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210053.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3957639	3957841	.	+	.	ID=id300;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3957916	3958065	.	-	.	ID=gene3646;Name=YPD4_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18285
NC_017154.1	Protein Homology	CDS	3957916	3958065	.	-	0	ID=cds3582;Parent=gene3646;Dbxref=Genbank:WP_002374696.1;Name=WP_002374696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002374696.1;transl_table=11
NC_017154.1	RefSeq	gene	3958356	3958823	.	-	.	ID=gene3647;Name=YPD4_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18290;old_locus_tag=YPD4_3120
NC_017154.1	Protein Homology	CDS	3958356	3958823	.	-	0	ID=cds3583;Parent=gene3647;Dbxref=Genbank:WP_002210054.1;Name=WP_002210054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210054.1;transl_table=11
NC_017154.1	RefSeq	gene	3959299	3960111	.	+	.	ID=gene3648;Name=YPD4_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18295;old_locus_tag=YPD4_3121
NC_017154.1	Protein Homology	CDS	3959299	3960111	.	+	0	ID=cds3584;Parent=gene3648;Dbxref=Genbank:WP_002210055.1;Name=WP_002210055.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002210055.1;transl_table=11
NC_017154.1	RefSeq	gene	3960176	3961066	.	+	.	ID=gene3649;Name=YPD4_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18300;old_locus_tag=YPD4_3122
NC_017154.1	Protein Homology	CDS	3960176	3961066	.	+	0	ID=cds3585;Parent=gene3649;Dbxref=Genbank:WP_002210056.1;Name=WP_002210056.1;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_002210056.1;transl_table=11
NC_017154.1	RefSeq	gene	3961244	3961639	.	+	.	ID=gene3650;Name=YPD4_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18305;old_locus_tag=YPD4_3123
NC_017154.1	Protein Homology	CDS	3961244	3961639	.	+	0	ID=cds3586;Parent=gene3650;Dbxref=Genbank:WP_002217470.1;Name=WP_002217470.1;gbkey=CDS;product=gamma carboxymuconolactone decarboxylase;protein_id=WP_002217470.1;transl_table=11
NC_017154.1	RefSeq	gene	3961793	3963156	.	+	.	ID=gene3651;Name=YPD4_RS18310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS18310;pseudo=true
NC_017154.1	Protein Homology	CDS	3961793	3963156	.	+	0	ID=cds3587;Parent=gene3651;exception=annotated by transcript or proteomic data;gbkey=CDS;product=MFS transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	3963246	3963908	.	+	.	ID=gene3652;Name=YPD4_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18315;old_locus_tag=YPD4_3126
NC_017154.1	Protein Homology	CDS	3963246	3963908	.	+	0	ID=cds3588;Parent=gene3652;Dbxref=Genbank:WP_002210059.1;Name=WP_002210059.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210059.1;transl_table=11
NC_017154.1	RefSeq	gene	3963974	3964450	.	+	.	ID=gene3653;Name=YPD4_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18320;old_locus_tag=YPD4_3127
NC_017154.1	Protein Homology	CDS	3963974	3964450	.	+	0	ID=cds3589;Parent=gene3653;Dbxref=Genbank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210060.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3964610	3965092	.	+	.	ID=id301;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3965204	3965500	.	-	.	ID=gene3654;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=YPD4_RS18325
NC_017154.1	Protein Homology	CDS	3965204	3965500	.	-	0	ID=cds3590;Parent=gene3654;Dbxref=Genbank:WP_002210061.1;Name=WP_002210061.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_002210061.1;transl_table=11
NC_017154.1	RefSeq	gene	3965525	3966490	.	-	.	ID=gene3655;Name=YPD4_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18330;old_locus_tag=YPD4_3128
NC_017154.1	Protein Homology	CDS	3965525	3966490	.	-	0	ID=cds3591;Parent=gene3655;Dbxref=Genbank:WP_002210062.1;Name=WP_002210062.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_002210062.1;transl_table=11
NC_017154.1	RefSeq	gene	3967079	3967960	.	-	.	ID=gene3656;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=YPD4_RS18335;old_locus_tag=YPD4_3129
NC_017154.1	Protein Homology	CDS	3967079	3967960	.	-	0	ID=cds3592;Parent=gene3656;Dbxref=Genbank:WP_002220963.1;Name=WP_002220963.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=WP_002220963.1;transl_table=11
NC_017154.1	RefSeq	gene	3968036	3969490	.	-	.	ID=gene3657;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=YPD4_RS18340;old_locus_tag=YPD4_3130
NC_017154.1	Protein Homology	CDS	3968036	3969490	.	-	0	ID=cds3593;Parent=gene3657;Dbxref=Genbank:WP_002210065.1;Name=WP_002210065.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium:pantothenate symporter;protein_id=WP_002210065.1;transl_table=11
NC_017154.1	RefSeq	gene	3969480	3969722	.	-	.	ID=gene3658;Name=YPD4_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18345
NC_017154.1	Protein Homology	CDS	3969480	3969722	.	-	0	ID=cds3594;Parent=gene3658;Dbxref=Genbank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210066.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3969737	3970037	.	+	.	ID=id302;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3971080	3972429	.	-	.	ID=gene3659;Name=YPD4_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18350;old_locus_tag=YPD4_3131
NC_017154.1	Protein Homology	CDS	3971080	3972429	.	-	0	ID=cds3595;Parent=gene3659;Dbxref=Genbank:WP_002210069.1;Name=WP_002210069.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002210069.1;transl_table=11
NC_017154.1	RefSeq	gene	3972441	3972905	.	-	.	ID=gene3660;Name=YPD4_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18355;old_locus_tag=YPD4_3132
NC_017154.1	Protein Homology	CDS	3972441	3972905	.	-	0	ID=cds3596;Parent=gene3660;Dbxref=Genbank:WP_002210070.1;Name=WP_002210070.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_002210070.1;transl_table=11
NC_017154.1	RefSeq	gene	3973063	3973515	.	-	.	ID=gene3661;Name=YPD4_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18360;old_locus_tag=YPD4_3133
NC_017154.1	Protein Homology	CDS	3973063	3973515	.	-	0	ID=cds3597;Parent=gene3661;Dbxref=Genbank:WP_002210071.1;Name=WP_002210071.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11
NC_017154.1	RefSeq	gene	3973778	3974398	.	-	.	ID=gene3662;Name=YPD4_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18365;old_locus_tag=YPD4_3134
NC_017154.1	Protein Homology	CDS	3973778	3974398	.	-	0	ID=cds3598;Parent=gene3662;Dbxref=Genbank:WP_002210072.1;Name=WP_002210072.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_002210072.1;transl_table=11
NC_017154.1	RefSeq	gene	3974398	3975498	.	-	.	ID=gene3663;Name=YPD4_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18370;old_locus_tag=YPD4_3135
NC_017154.1	Protein Homology	CDS	3974398	3975498	.	-	0	ID=cds3599;Parent=gene3663;Dbxref=Genbank:WP_002210073.1;Name=WP_002210073.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=sulfoxide reductase catalytic subunit YedY;protein_id=WP_002210073.1;transl_table=11
NC_017154.1	RefSeq	gene	3975721	3976698	.	-	.	ID=gene3664;Name=YPD4_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18375;old_locus_tag=YPD4_3136
NC_017154.1	Protein Homology	CDS	3975721	3976698	.	-	0	ID=cds3600;Parent=gene3664;Dbxref=Genbank:WP_002210074.1;Name=WP_002210074.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210074.1;transl_table=11
NC_017154.1	RefSeq	gene	3977099	3979015	.	+	.	ID=gene3665;Name=YPD4_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18380;old_locus_tag=YPD4_3137
NC_017154.1	Protein Homology	CDS	3977099	3979015	.	+	0	ID=cds3601;Parent=gene3665;Dbxref=Genbank:WP_002210075.1;Name=WP_002210075.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210075.1;transl_table=11
NC_017154.1	RefSeq	gene	3979353	3980396	.	+	.	ID=gene3666;Name=YPD4_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18385;old_locus_tag=YPD4_3138
NC_017154.1	Protein Homology	CDS	3979353	3980396	.	+	0	ID=cds3602;Parent=gene3666;Dbxref=Genbank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11
NC_017154.1	RefSeq	gene	3980600	3981595	.	+	.	ID=gene3667;Name=YPD4_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18390;old_locus_tag=YPD4_3139
NC_017154.1	Protein Homology	CDS	3980600	3981595	.	+	0	ID=cds3603;Parent=gene3667;Dbxref=Genbank:WP_002210076.1;Name=WP_002210076.1;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=WP_002210076.1;transl_table=11
NC_017154.1	RefSeq	gene	3981592	3982080	.	+	.	ID=gene3668;Name=YPD4_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18395;old_locus_tag=YPD4_3140
NC_017154.1	Protein Homology	CDS	3981592	3982080	.	+	0	ID=cds3604;Parent=gene3668;Dbxref=Genbank:WP_002210077.1;Name=WP_002210077.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11
NC_017154.1	RefSeq	gene	3982094	3982687	.	+	.	ID=gene3669;Name=YPD4_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18400;old_locus_tag=YPD4_3141
NC_017154.1	Protein Homology	CDS	3982094	3982687	.	+	0	ID=cds3605;Parent=gene3669;Dbxref=Genbank:WP_002210078.1;Name=WP_002210078.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210078.1;transl_table=11
NC_017154.1	RefSeq	gene	3982677	3984146	.	+	.	ID=gene3670;Name=YPD4_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18405;old_locus_tag=YPD4_3142
NC_017154.1	Protein Homology	CDS	3982677	3984146	.	+	0	ID=cds3606;Parent=gene3670;Dbxref=Genbank:WP_002210079.1;Name=WP_002210079.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11
NC_017154.1	RefSeq	gene	3984261	3988163	.	+	.	ID=gene3671;Name=YPD4_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18410;old_locus_tag=YPD4_3143
NC_017154.1	Protein Homology	CDS	3984261	3988163	.	+	0	ID=cds3607;Parent=gene3671;Dbxref=Genbank:WP_013060352.1;Name=WP_013060352.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060352.1;transl_table=11
NC_017154.1	RefSeq	gene	3988160	3989029	.	+	.	ID=gene3672;Name=YPD4_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18415;old_locus_tag=YPD4_3144
NC_017154.1	Protein Homology	CDS	3988160	3989029	.	+	0	ID=cds3608;Parent=gene3672;Dbxref=Genbank:WP_002210081.1;Name=WP_002210081.1;gbkey=CDS;product=amidohydrolase;protein_id=WP_002210081.1;transl_table=11
NC_017154.1	RefSeq	gene	3989041	3990486	.	+	.	ID=gene3673;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=YPD4_RS18420;old_locus_tag=YPD4_3145
NC_017154.1	Protein Homology	CDS	3989041	3990486	.	+	0	ID=cds3609;Parent=gene3673;Dbxref=Genbank:WP_002210082.1;Name=WP_002210082.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=WP_002210082.1;transl_table=11
NC_017154.1	RefSeq	gene	3990689	3993547	.	-	.	ID=gene3674;Name=YPD4_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18425;old_locus_tag=YPD4_3146
NC_017154.1	Protein Homology	CDS	3990689	3993547	.	-	0	ID=cds3610;Parent=gene3674;Dbxref=Genbank:WP_002210083.1;Name=WP_002210083.1;gbkey=CDS;product=toxin;protein_id=WP_002210083.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3991572	3993520	.	+	.	ID=id303;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3993572	3996403	.	-	.	ID=gene3675;Name=YPD4_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18430;old_locus_tag=YPD4_3147
NC_017154.1	Protein Homology	CDS	3993572	3996403	.	-	0	ID=cds3611;Parent=gene3675;Dbxref=Genbank:WP_002210084.1;Name=WP_002210084.1;gbkey=CDS;product=toxin;protein_id=WP_002210084.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	3994428	3996376	.	+	.	ID=id304;gbkey=repeat_region
NC_017154.1	RefSeq	gene	3996604	3996963	.	-	.	ID=gene3676;Name=YPD4_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18440;old_locus_tag=YPD4_3148
NC_017154.1	Protein Homology	CDS	3996604	3996963	.	-	0	ID=cds3612;Parent=gene3676;Dbxref=Genbank:WP_002210086.1;Name=WP_002210086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210086.1;transl_table=11
NC_017154.1	RefSeq	gene	3996960	3997361	.	-	.	ID=gene3677;Name=YPD4_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18445;old_locus_tag=YPD4_3149
NC_017154.1	Protein Homology	CDS	3996960	3997361	.	-	0	ID=cds3613;Parent=gene3677;Dbxref=Genbank:WP_002210087.1;Name=WP_002210087.1;gbkey=CDS;product=peptidase M15;protein_id=WP_002210087.1;transl_table=11
NC_017154.1	RefSeq	gene	3997374	3997676	.	-	.	ID=gene3678;Name=YPD4_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18450;old_locus_tag=YPD4_3150
NC_017154.1	Protein Homology	CDS	3997374	3997676	.	-	0	ID=cds3614;Parent=gene3678;Dbxref=Genbank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214300.1;transl_table=11
NC_017154.1	RefSeq	gene	3997810	4002300	.	-	.	ID=gene3679;Name=YPD4_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18455;old_locus_tag=YPD4_3151
NC_017154.1	Protein Homology	CDS	3997810	4002300	.	-	0	ID=cds3615;Parent=gene3679;Dbxref=Genbank:WP_002210089.1;Name=WP_002210089.1;gbkey=CDS;product=toxin;protein_id=WP_002210089.1;transl_table=11
NC_017154.1	RefSeq	gene	4002357	4004498	.	-	.	ID=gene3680;Name=YPD4_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18460;old_locus_tag=YPD4_3152
NC_017154.1	Protein Homology	CDS	4002357	4004498	.	-	0	ID=cds3616;Parent=gene3680;Dbxref=Genbank:WP_002229661.1;Name=WP_002229661.1;gbkey=CDS;product=toxin subunit;protein_id=WP_002229661.1;transl_table=11
NC_017154.1	RefSeq	gene	4004567	4005949	.	-	.	ID=gene3681;Name=YPD4_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18465;old_locus_tag=YPD4_3153
NC_017154.1	Protein Homology	CDS	4004567	4005949	.	-	0	ID=cds3617;Parent=gene3681;Dbxref=Genbank:WP_002229660.1;Name=WP_002229660.1;gbkey=CDS;product=toxin subunit;protein_id=WP_002229660.1;transl_table=11
NC_017154.1	RefSeq	gene	4005990	4008491	.	-	.	ID=gene3682;Name=YPD4_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18470;old_locus_tag=YPD4_3154
NC_017154.1	Protein Homology	CDS	4005990	4008491	.	-	0	ID=cds3618;Parent=gene3682;Dbxref=Genbank:WP_002210090.1;Name=WP_002210090.1;gbkey=CDS;product=toxin;protein_id=WP_002210090.1;transl_table=11
NC_017154.1	RefSeq	gene	4008727	4009593	.	-	.	ID=gene3683;Name=YPD4_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18475;old_locus_tag=YPD4_3155
NC_017154.1	Protein Homology	CDS	4008727	4009593	.	-	0	ID=cds3619;Parent=gene3683;Dbxref=Genbank:WP_002214297.1;Name=WP_002214297.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002214297.1;transl_table=11
NC_017154.1	RefSeq	gene	4009854	4010765	.	-	.	ID=gene3684;Name=YPD4_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18480;old_locus_tag=YPD4_3156
NC_017154.1	Protein Homology	CDS	4009854	4010765	.	-	0	ID=cds3620;Parent=gene3684;Dbxref=Genbank:WP_002210092.1;Name=WP_002210092.1;Note=for aaeXAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210092.1;transl_table=11
NC_017154.1	RefSeq	gene	4011068	4011271	.	+	.	ID=gene3685;Name=YPD4_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18485
NC_017154.1	Protein Homology	CDS	4011068	4011271	.	+	0	ID=cds3621;Parent=gene3685;Dbxref=Genbank:WP_002210093.1;Name=WP_002210093.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=protein AaeX;protein_id=WP_002210093.1;transl_table=11
NC_017154.1	RefSeq	gene	4011279	4012214	.	+	.	ID=gene3686;Name=YPD4_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18490;old_locus_tag=YPD4_3157
NC_017154.1	Protein Homology	CDS	4011279	4012214	.	+	0	ID=cds3622;Parent=gene3686;Dbxref=Genbank:WP_002210094.1;Name=WP_002210094.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002210094.1;transl_table=11
NC_017154.1	RefSeq	gene	4012216	4014171	.	+	.	ID=gene3687;Name=YPD4_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18495;old_locus_tag=YPD4_3158
NC_017154.1	Protein Homology	CDS	4012216	4014171	.	+	0	ID=cds3623;Parent=gene3687;Dbxref=Genbank:WP_002210095.1;Name=WP_002210095.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002210095.1;transl_table=11
NC_017154.1	RefSeq	gene	4014438	4015571	.	+	.	ID=gene3688;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=YPD4_RS18500;old_locus_tag=YPD4_3159
NC_017154.1	Protein Homology	CDS	4014438	4015571	.	+	0	ID=cds3624;Parent=gene3688;Dbxref=Genbank:WP_002214290.1;Name=WP_002214290.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;protein_id=WP_002214290.1;transl_table=11
NC_017154.1	RefSeq	gene	4015568	4015906	.	+	.	ID=gene3689;Name=YPD4_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18505;old_locus_tag=YPD4_3160
NC_017154.1	Protein Homology	CDS	4015568	4015906	.	+	0	ID=cds3625;Parent=gene3689;Dbxref=Genbank:WP_002214289.1;Name=WP_002214289.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002214289.1;transl_table=11
NC_017154.1	RefSeq	gene	4016101	4016574	.	+	.	ID=gene3690;Name=YPD4_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18510;old_locus_tag=YPD4_3161
NC_017154.1	Protein Homology	CDS	4016101	4016574	.	+	0	ID=cds3626;Parent=gene3690;Dbxref=Genbank:WP_002214288.1;Name=WP_002214288.1;gbkey=CDS;product=ribonuclease Ba;protein_id=WP_002214288.1;transl_table=11
NC_017154.1	RefSeq	gene	4016579	4016860	.	+	.	ID=gene3691;Name=YPD4_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18515
NC_017154.1	Protein Homology	CDS	4016579	4016860	.	+	0	ID=cds3627;Parent=gene3691;Dbxref=Genbank:WP_002210098.1;Name=WP_002210098.1;gbkey=CDS;product=ribonuclease inhibitor;protein_id=WP_002210098.1;transl_table=11
NC_017154.1	RefSeq	gene	4016972	4017520	.	-	.	ID=gene3692;Name=YPD4_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18520;old_locus_tag=YPD4_3162
NC_017154.1	Protein Homology	CDS	4016972	4017520	.	-	0	ID=cds3628;Parent=gene3692;Dbxref=Genbank:WP_002210099.1;Name=WP_002210099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210099.1;transl_table=11
NC_017154.1	RefSeq	gene	4017701	4019041	.	+	.	ID=gene3693;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=YPD4_RS18525;old_locus_tag=YPD4_3163
NC_017154.1	Protein Homology	CDS	4017701	4019041	.	+	0	ID=cds3629;Parent=gene3693;Dbxref=Genbank:WP_002210100.1;Name=WP_002210100.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PMbA;protein_id=WP_002210100.1;transl_table=11
NC_017154.1	RefSeq	gene	4019290	4019934	.	+	.	ID=gene3694;Name=YPD4_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18530;old_locus_tag=YPD4_3164
NC_017154.1	Protein Homology	CDS	4019290	4019934	.	+	0	ID=cds3630;Parent=gene3694;Dbxref=Genbank:WP_011055205.1;Name=WP_011055205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011055205.1;transl_table=11
NC_017154.1	RefSeq	gene	4020142	4020528	.	+	.	ID=gene3695;Name=YPD4_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18535;old_locus_tag=YPD4_3165
NC_017154.1	Protein Homology	CDS	4020142	4020528	.	+	0	ID=cds3631;Parent=gene3695;Dbxref=Genbank:WP_002210102.1;Name=WP_002210102.1;gbkey=CDS;product=soluble cytochrome b562 2;protein_id=WP_002210102.1;transl_table=11
NC_017154.1	RefSeq	gene	4020760	4021170	.	-	.	ID=gene3696;Name=YPD4_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18540;old_locus_tag=YPD4_3166
NC_017154.1	Protein Homology	CDS	4020760	4021170	.	-	0	ID=cds3632;Parent=gene3696;Dbxref=Genbank:WP_002210103.1;Name=WP_002210103.1;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11
NC_017154.1	RefSeq	gene	4021523	4023190	.	-	.	ID=gene3697;Name=YPD4_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18545;old_locus_tag=YPD4_3167
NC_017154.1	Protein Homology	CDS	4021523	4023190	.	-	0	ID=cds3633;Parent=gene3697;Dbxref=Genbank:WP_002210104.1;Name=WP_002210104.1;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=WP_002210104.1;transl_table=11
NC_017154.1	RefSeq	gene	4023285	4024700	.	-	.	ID=gene3698;Name=YPD4_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18550;old_locus_tag=YPD4_3168
NC_017154.1	Protein Homology	CDS	4023285	4024700	.	-	0	ID=cds3634;Parent=gene3698;Dbxref=Genbank:WP_002215779.1;Name=WP_002215779.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS maltose transporter subunit IIBC;protein_id=WP_002215779.1;transl_table=11
NC_017154.1	RefSeq	gene	4025111	4026064	.	-	.	ID=gene3699;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=YPD4_RS18555;old_locus_tag=YPD4_3169
NC_017154.1	Protein Homology	CDS	4025111	4026064	.	-	0	ID=cds3635;Parent=gene3699;Dbxref=Genbank:WP_002210106.1;Name=WP_002210106.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=WP_002210106.1;transl_table=11
NC_017154.1	RefSeq	gene	4026298	4026774	.	-	.	ID=gene3700;Name=YPD4_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18560;old_locus_tag=YPD4_3170
NC_017154.1	Protein Homology	CDS	4026298	4026774	.	-	0	ID=cds3636;Parent=gene3700;Dbxref=Genbank:WP_002210107.1;Name=WP_002210107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210107.1;transl_table=11
NC_017154.1	RefSeq	gene	4027073	4027459	.	-	.	ID=gene3701;Name=YPD4_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18565;old_locus_tag=YPD4_3171
NC_017154.1	Protein Homology	CDS	4027073	4027459	.	-	0	ID=cds3637;Parent=gene3701;Dbxref=Genbank:WP_002210109.1;Name=WP_002210109.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210109.1;transl_table=11
NC_017154.1	RefSeq	gene	4027597	4028061	.	-	.	ID=gene3702;Name=YPD4_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18570;old_locus_tag=YPD4_3172
NC_017154.1	Protein Homology	CDS	4027597	4028061	.	-	0	ID=cds3638;Parent=gene3702;Dbxref=Genbank:WP_002210110.1;Name=WP_002210110.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory chain;protein_id=WP_002210110.1;transl_table=11
NC_017154.1	RefSeq	gene	4028073	4029008	.	-	.	ID=gene3703;Name=YPD4_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18575;old_locus_tag=YPD4_3173
NC_017154.1	Protein Homology	CDS	4028073	4029008	.	-	0	ID=cds3639;Parent=gene3703;Dbxref=Genbank:WP_002210111.1;Name=WP_002210111.1;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=WP_002210111.1;transl_table=11
NC_017154.1	RefSeq	gene	4029346	4029618	.	-	.	ID=gene3704;Name=YPD4_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18580
NC_017154.1	Protein Homology	CDS	4029346	4029618	.	-	0	ID=cds3640;Parent=gene3704;Dbxref=Genbank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase;protein_id=WP_002210112.1;transl_table=11
NC_017154.1	RefSeq	gene	4029615	4030469	.	-	.	ID=gene3705;Name=YPD4_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18585;old_locus_tag=YPD4_3174
NC_017154.1	Protein Homology	CDS	4029615	4030469	.	-	0	ID=cds3641;Parent=gene3705;Dbxref=Genbank:WP_002210113.1;Name=WP_002210113.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_002210113.1;transl_table=11
NC_017154.1	RefSeq	gene	4030775	4031257	.	-	.	ID=gene3706;Name=YPD4_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18590;old_locus_tag=YPD4_3175
NC_017154.1	Protein Homology	CDS	4030775	4031257	.	-	0	ID=cds3642;Parent=gene3706;Dbxref=Genbank:WP_002213952.1;Name=WP_002213952.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=PTS sugar transporter subunit IIA;protein_id=WP_002213952.1;transl_table=11
NC_017154.1	RefSeq	gene	4031375	4031662	.	-	.	ID=gene3707;Name=YPD4_RS18595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS18595;pseudo=true
NC_017154.1	Protein Homology	CDS	4031375	4031662	.	-	0	ID=cds3643;Parent=gene3707;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(4031555..4031557)%2Caa:Other);transl_table=11
NC_017154.1	RefSeq	gene	4031686	4033119	.	-	.	ID=gene3708;Name=YPD4_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18600;old_locus_tag=YPD4_3176
NC_017154.1	Protein Homology	CDS	4031686	4033119	.	-	0	ID=cds3644;Parent=gene3708;Dbxref=Genbank:WP_002210115.1;Name=WP_002210115.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;product=RNA polymerase sigma-54 factor;protein_id=WP_002210115.1;transl_table=11
NC_017154.1	RefSeq	gene	4033181	4033906	.	-	.	ID=gene3709;Name=YPD4_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18605;old_locus_tag=YPD4_3177
NC_017154.1	Protein Homology	CDS	4033181	4033906	.	-	0	ID=cds3645;Parent=gene3709;Dbxref=Genbank:WP_002210116.1;Name=WP_002210116.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11
NC_017154.1	RefSeq	gene	4033913	4034458	.	-	.	ID=gene3710;Name=YPD4_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18610;old_locus_tag=YPD4_3178
NC_017154.1	Protein Homology	CDS	4033913	4034458	.	-	0	ID=cds3646;Parent=gene3710;Dbxref=Genbank:WP_002210117.1;Name=WP_002210117.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210117.1;transl_table=11
NC_017154.1	RefSeq	gene	4034442	4035005	.	-	.	ID=gene3711;Name=YPD4_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18615;old_locus_tag=YPD4_3179
NC_017154.1	Protein Homology	CDS	4034442	4035005	.	-	0	ID=cds3647;Parent=gene3711;Dbxref=Genbank:WP_002218352.1;Name=WP_002218352.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_002218352.1;transl_table=11
NC_017154.1	RefSeq	gene	4035002	4035565	.	-	.	ID=gene3712;Name=YPD4_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18620;old_locus_tag=YPD4_3180
NC_017154.1	Protein Homology	CDS	4035002	4035565	.	-	0	ID=cds3648;Parent=gene3712;Dbxref=Genbank:WP_002228203.1;Name=WP_002228203.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11
NC_017154.1	RefSeq	gene	4035814	4036800	.	-	.	ID=gene3713;Name=YPD4_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18625;old_locus_tag=YPD4_3181
NC_017154.1	Protein Homology	CDS	4035814	4036800	.	-	0	ID=cds3649;Parent=gene3713;Dbxref=Genbank:WP_002210119.1;Name=WP_002210119.1;gbkey=CDS;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11
NC_017154.1	RefSeq	gene	4036911	4037885	.	-	.	ID=gene3714;Name=YPD4_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18630;old_locus_tag=YPD4_3182
NC_017154.1	Protein Homology	CDS	4036911	4037885	.	-	0	ID=cds3650;Parent=gene3714;Dbxref=Genbank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;product=sodium:calcium antiporter;protein_id=WP_002210120.1;transl_table=11
NC_017154.1	RefSeq	gene	4038150	4038968	.	+	.	ID=gene3715;Name=YPD4_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18635;old_locus_tag=YPD4_3183
NC_017154.1	Protein Homology	CDS	4038150	4038968	.	+	0	ID=cds3651;Parent=gene3715;Dbxref=Genbank:WP_002210121.1;Name=WP_002210121.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter ATP-binding protein;protein_id=WP_002210121.1;transl_table=11
NC_017154.1	RefSeq	gene	4039186	4039968	.	+	.	ID=gene3716;Name=YPD4_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18640;old_locus_tag=YPD4_3184
NC_017154.1	Protein Homology	CDS	4039186	4039968	.	+	0	ID=cds3652;Parent=gene3716;Dbxref=Genbank:WP_002210122.1;Name=WP_002210122.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210122.1;transl_table=11
NC_017154.1	RefSeq	gene	4039973	4040530	.	+	.	ID=gene3717;Name=YPD4_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18645;old_locus_tag=YPD4_3185
NC_017154.1	Protein Homology	CDS	4039973	4040530	.	+	0	ID=cds3653;Parent=gene3717;Dbxref=Genbank:WP_002210123.1;Name=WP_002210123.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_002210123.1;transl_table=11
NC_017154.1	RefSeq	gene	4040543	4041166	.	+	.	ID=gene3718;Name=YPD4_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18650;old_locus_tag=YPD4_3186
NC_017154.1	Protein Homology	CDS	4040543	4041166	.	+	0	ID=cds3654;Parent=gene3718;Dbxref=Genbank:WP_002210124.1;Name=WP_002210124.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter substrate-binding protein;protein_id=WP_002210124.1;transl_table=11
NC_017154.1	RefSeq	gene	4041202	4041504	.	+	.	ID=gene3719;Name=YPD4_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18655;old_locus_tag=YPD4_3187
NC_017154.1	Protein Homology	CDS	4041202	4041504	.	+	0	ID=cds3655;Parent=gene3719;Dbxref=Genbank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=WP_002210125.1;transl_table=11
NC_017154.1	RefSeq	gene	4041651	4041905	.	+	.	ID=gene3720;Name=YPD4_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18660
NC_017154.1	Protein Homology	CDS	4041651	4041905	.	+	0	ID=cds3656;Parent=gene3720;Dbxref=Genbank:WP_002210126.1;Name=WP_002210126.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210126.1;transl_table=11
NC_017154.1	RefSeq	gene	4042059	4043321	.	+	.	ID=gene3721;Name=YPD4_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18665;old_locus_tag=YPD4_3188
NC_017154.1	Protein Homology	CDS	4042059	4043321	.	+	0	ID=cds3657;Parent=gene3721;Dbxref=Genbank:WP_002210127.1;Name=WP_002210127.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11
NC_017154.1	RefSeq	gene	4043502	4044590	.	-	.	ID=gene3722;Name=YPD4_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18670;old_locus_tag=YPD4_3189
NC_017154.1	Protein Homology	CDS	4043502	4044590	.	-	0	ID=cds3658;Parent=gene3722;Dbxref=Genbank:WP_002210128.1;Name=WP_002210128.1;gbkey=CDS;product=serine endoprotease;protein_id=WP_002210128.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4044668	4045385	.	+	.	ID=id305;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4044816	4045274	.	+	.	ID=gene3723;Name=YPD4_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18675;old_locus_tag=YPD4_3190
NC_017154.1	Protein Homology	CDS	4044816	4045274	.	+	0	ID=cds3659;Parent=gene3723;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	4045391	4046764	.	-	.	ID=gene3724;Name=YPD4_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18680;old_locus_tag=YPD4_3191
NC_017154.1	Protein Homology	CDS	4045391	4046764	.	-	0	ID=cds3660;Parent=gene3724;Dbxref=Genbank:WP_002218066.1;Name=WP_002218066.1;gbkey=CDS;product=protease;protein_id=WP_002218066.1;transl_table=11
NC_017154.1	RefSeq	gene	4047035	4047439	.	-	.	ID=gene3725;Name=YPD4_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18685;old_locus_tag=YPD4_3192
NC_017154.1	Protein Homology	CDS	4047035	4047439	.	-	0	ID=cds3661;Parent=gene3725;Dbxref=Genbank:WP_002210130.1;Name=WP_002210130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210130.1;transl_table=11
NC_017154.1	RefSeq	gene	4047663	4048790	.	+	.	ID=gene3726;Name=YPD4_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18690;old_locus_tag=YPD4_3193
NC_017154.1	Protein Homology	CDS	4047663	4048790	.	+	0	ID=cds3662;Parent=gene3726;Dbxref=Genbank:WP_002210131.1;Name=WP_002210131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210131.1;transl_table=11
NC_017154.1	RefSeq	gene	4049104	4049532	.	+	.	ID=gene3727;Name=YPD4_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18695;old_locus_tag=YPD4_3194
NC_017154.1	Protein Homology	CDS	4049104	4049532	.	+	0	ID=cds3663;Parent=gene3727;Dbxref=Genbank:WP_002210132.1;Name=WP_002210132.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11
NC_017154.1	RefSeq	gene	4049547	4049939	.	+	.	ID=gene3728;Name=YPD4_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18700;old_locus_tag=YPD4_3195
NC_017154.1	Protein Homology	CDS	4049547	4049939	.	+	0	ID=cds3664;Parent=gene3728;Dbxref=Genbank:WP_002210133.1;Name=WP_002210133.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11
NC_017154.1	RefSeq	gene	4049936	4050133	.	-	.	ID=gene3729;Name=YPD4_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18705
NC_017154.1	Protein Homology	CDS	4049936	4050133	.	-	0	ID=cds3665;Parent=gene3729;Dbxref=Genbank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11
NC_017154.1	RefSeq	gene	4050313	4050954	.	+	.	ID=gene3730;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=YPD4_RS18710;old_locus_tag=YPD4_3196
NC_017154.1	Protein Homology	CDS	4050313	4050954	.	+	0	ID=cds3666;Parent=gene3730;Dbxref=Genbank:WP_002210135.1;Name=WP_002210135.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_002210135.1;transl_table=11
NC_017154.1	RefSeq	gene	4050960	4051475	.	+	.	ID=gene3731;Name=YPD4_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18715;old_locus_tag=YPD4_3197
NC_017154.1	Protein Homology	CDS	4050960	4051475	.	+	0	ID=cds3667;Parent=gene3731;Dbxref=Genbank:WP_002216203.1;Name=WP_002216203.1;gbkey=CDS;product=peptidase;protein_id=WP_002216203.1;transl_table=11
NC_017154.1	RefSeq	gene	4051628	4052113	.	-	.	ID=gene3732;Name=YPD4_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18720;old_locus_tag=YPD4_3198
NC_017154.1	Protein Homology	CDS	4051628	4052113	.	-	0	ID=cds3668;Parent=gene3732;Dbxref=Genbank:WP_002210137.1;Name=WP_002210137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210137.1;transl_table=11
NC_017154.1	RefSeq	gene	4052554	4053972	.	-	.	ID=gene3733;Name=YPD4_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18725;old_locus_tag=YPD4_3199
NC_017154.1	Protein Homology	CDS	4052554	4053972	.	-	0	ID=cds3669;Parent=gene3733;Dbxref=Genbank:WP_002210138.1;Name=WP_002210138.1;gbkey=CDS;product=glutamate synthase subunit beta;protein_id=WP_002210138.1;transl_table=11
NC_017154.1	RefSeq	gene	4053982	4058439	.	-	.	ID=gene3734;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=YPD4_RS18730;old_locus_tag=YPD4_3200
NC_017154.1	Protein Homology	CDS	4053982	4058439	.	-	0	ID=cds3670;Parent=gene3734;Dbxref=Genbank:WP_002228691.1;Name=WP_002228691.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=WP_002228691.1;transl_table=11
NC_017154.1	RefSeq	gene	4059262	4060185	.	+	.	ID=gene3735;Name=YPD4_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18735;old_locus_tag=YPD4_3201
NC_017154.1	Protein Homology	CDS	4059262	4060185	.	+	0	ID=cds3671;Parent=gene3735;Dbxref=Genbank:WP_002210140.1;Name=WP_002210140.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_002210140.1;transl_table=11
NC_017154.1	RefSeq	gene	4060166	4060381	.	+	.	ID=gene3736;Name=YPD4_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18740
NC_017154.1	Protein Homology	CDS	4060166	4060381	.	+	0	ID=cds3672;Parent=gene3736;Dbxref=Genbank:WP_002216211.1;Name=WP_002216211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216211.1;transl_table=11
NC_017154.1	RefSeq	gene	4060449	4062785	.	+	.	ID=gene3737;Name=YPD4_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18745;old_locus_tag=YPD4_3202
NC_017154.1	Protein Homology	CDS	4060449	4062785	.	+	0	ID=cds3673;Parent=gene3737;Dbxref=Genbank:WP_002210142.1;Name=WP_002210142.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase/response regulator;protein_id=WP_002210142.1;transl_table=11
NC_017154.1	RefSeq	gene	4062803	4062997	.	+	.	ID=gene3738;Name=YPD4_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18750
NC_017154.1	Protein Homology	CDS	4062803	4062997	.	+	0	ID=cds3674;Parent=gene3738;Dbxref=Genbank:WP_002228201.1;Name=WP_002228201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228201.1;transl_table=11
NC_017154.1	RefSeq	gene	4063027	4063680	.	+	.	ID=gene3739;Name=YPD4_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18755;old_locus_tag=YPD4_3203
NC_017154.1	Protein Homology	CDS	4063027	4063680	.	+	0	ID=cds3675;Parent=gene3739;Dbxref=Genbank:WP_002210143.1;Name=WP_002210143.1;gbkey=CDS;product=isoprenoid biosynthesis protein;protein_id=WP_002210143.1;transl_table=11
NC_017154.1	RefSeq	gene	4063677	4064402	.	+	.	ID=gene3740;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=YPD4_RS18760;old_locus_tag=YPD4_3204
NC_017154.1	Protein Homology	CDS	4063677	4064402	.	+	0	ID=cds3676;Parent=gene3740;Dbxref=Genbank:WP_002210144.1;Name=WP_002210144.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_002210144.1;transl_table=11
NC_017154.1	RefSeq	gene	4064609	4065184	.	-	.	ID=gene3741;Name=YPD4_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18765;old_locus_tag=YPD4_3205
NC_017154.1	Protein Homology	CDS	4064609	4065184	.	-	0	ID=cds3677;Parent=gene3741;Dbxref=Genbank:WP_002210145.1;Name=WP_002210145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210145.1;transl_table=11
NC_017154.1	RefSeq	gene	4065195	4065785	.	-	.	ID=gene3742;Name=YPD4_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18770;old_locus_tag=YPD4_3206
NC_017154.1	Protein Homology	CDS	4065195	4065785	.	-	0	ID=cds3678;Parent=gene3742;Dbxref=Genbank:WP_002210146.1;Name=WP_002210146.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_002210146.1;transl_table=11
NC_017154.1	RefSeq	gene	4066056	4066409	.	-	.	ID=gene3743;Name=YPD4_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18775;old_locus_tag=YPD4_3207
NC_017154.1	Protein Homology	CDS	4066056	4066409	.	-	0	ID=cds3679;Parent=gene3743;Dbxref=Genbank:WP_002210147.1;Name=WP_002210147.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210147.1;transl_table=11
NC_017154.1	RefSeq	gene	4066493	4068466	.	-	.	ID=gene3744;Name=YPD4_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18780;old_locus_tag=YPD4_3208
NC_017154.1	Protein Homology	CDS	4066493	4068466	.	-	0	ID=cds3680;Parent=gene3744;Dbxref=Genbank:WP_002228200.1;Name=WP_002228200.1;gbkey=CDS;product=penicillin-binding protein activator LpoA;protein_id=WP_002228200.1;transl_table=11
NC_017154.1	RefSeq	gene	4068529	4069428	.	+	.	ID=gene3745;Name=YPD4_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18785;old_locus_tag=YPD4_3209
NC_017154.1	Protein Homology	CDS	4068529	4069428	.	+	0	ID=cds3681;Parent=gene3745;Dbxref=Genbank:WP_002210149.1;Name=WP_002210149.1;gbkey=CDS;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11
NC_017154.1	RefSeq	gene	4069448	4069826	.	+	.	ID=gene3746;Name=YPD4_RS22450;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=YPD4_RS22450
NC_017154.1	cmsearch	ncRNA	4069448	4069826	.	+	.	ID=rna59;Parent=gene3746;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P
NC_017154.1	cmsearch	exon	4069448	4069826	.	+	.	ID=id306;Parent=rna59;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P
NC_017154.1	RefSeq	repeat_region	4069804	4070331	.	+	.	ID=id307;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4070365	4071069	.	-	.	ID=gene3747;Name=YPD4_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18790;old_locus_tag=YPD4_3210
NC_017154.1	Protein Homology	CDS	4070365	4071069	.	-	0	ID=cds3682;Parent=gene3747;Dbxref=Genbank:WP_002210150.1;Name=WP_002210150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210150.1;transl_table=11
NC_017154.1	RefSeq	gene	4071331	4072224	.	+	.	ID=gene3748;Name=YPD4_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18795;old_locus_tag=YPD4_3211
NC_017154.1	Protein Homology	CDS	4071331	4072224	.	+	0	ID=cds3683;Parent=gene3748;Dbxref=Genbank:WP_002210151.1;Name=WP_002210151.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210151.1;transl_table=11
NC_017154.1	RefSeq	gene	4072355	4073292	.	-	.	ID=gene3749;Name=YPD4_RS18800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS18800;old_locus_tag=YPD4_3212;pseudo=true
NC_017154.1	Protein Homology	CDS	4072355	4073292	.	-	0	ID=cds3684;Parent=gene3749;exception=annotated by transcript or proteomic data;gbkey=CDS;product=glutathionyl-hydroquinone reductase YqjG;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	4073238	4075198	.	+	.	ID=id308;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4073305	4073721	.	-	.	ID=gene3750;Name=YPD4_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18805;old_locus_tag=YPD4_3213
NC_017154.1	Protein Homology	CDS	4073305	4073721	.	-	0	ID=cds3685;Parent=gene3750;Dbxref=Genbank:WP_000540201.1;Name=WP_000540201.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_000540201.1;transl_table=11
NC_017154.1	RefSeq	gene	4073711	4074085	.	-	.	ID=gene3751;Name=YPD4_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18810;old_locus_tag=YPD4_3214
NC_017154.1	Protein Homology	CDS	4073711	4074085	.	-	0	ID=cds3686;Parent=gene3751;Dbxref=Genbank:WP_002214912.1;Name=WP_002214912.1;gbkey=CDS;product=ATPase;protein_id=WP_002214912.1;transl_table=11
NC_017154.1	RefSeq	gene	4074085	4075107	.	-	.	ID=gene3752;Name=YPD4_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18815;old_locus_tag=YPD4_3215
NC_017154.1	Protein Homology	CDS	4074085	4075107	.	-	0	ID=cds3687;Parent=gene3752;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	4075164	4075865	.	+	.	ID=gene3753;Name=YPD4_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18820;old_locus_tag=YPD4_3216
NC_017154.1	Protein Homology	CDS	4075164	4075865	.	+	0	ID=cds3688;Parent=gene3753;Dbxref=Genbank:WP_002210152.1;Name=WP_002210152.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=esterase;protein_id=WP_002210152.1;transl_table=11
NC_017154.1	RefSeq	gene	4075940	4076218	.	+	.	ID=gene3754;Name=YPD4_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18825
NC_017154.1	Protein Homology	CDS	4075940	4076218	.	+	0	ID=cds3689;Parent=gene3754;Dbxref=Genbank:WP_002228199.1;Name=WP_002228199.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228199.1;transl_table=11
NC_017154.1	RefSeq	gene	4076232	4076624	.	+	.	ID=gene3755;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=YPD4_RS18830;old_locus_tag=YPD4_3217
NC_017154.1	Protein Homology	CDS	4076232	4076624	.	+	0	ID=cds3690;Parent=gene3755;Dbxref=Genbank:WP_002210153.1;Name=WP_002210153.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11
NC_017154.1	RefSeq	gene	4076633	4076950	.	+	.	ID=gene3756;Name=YPD4_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18835
NC_017154.1	Protein Homology	CDS	4076633	4076950	.	+	0	ID=cds3691;Parent=gene3756;Dbxref=Genbank:WP_002430134.1;Name=WP_002430134.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein n;protein_id=WP_002430134.1;transl_table=11
NC_017154.1	RefSeq	gene	4076955	4077182	.	+	.	ID=gene3757;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=YPD4_RS18840
NC_017154.1	Protein Homology	CDS	4076955	4077182	.	+	0	ID=cds3692;Parent=gene3757;Dbxref=Genbank:WP_002210155.1;Name=WP_002210155.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11
NC_017154.1	RefSeq	gene	4077222	4077674	.	+	.	ID=gene3758;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=YPD4_RS18845;old_locus_tag=YPD4_3218
NC_017154.1	Protein Homology	CDS	4077222	4077674	.	+	0	ID=cds3693;Parent=gene3758;Dbxref=Genbank:WP_002210156.1;Name=WP_002210156.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11
NC_017154.1	RefSeq	gene	4077710	4077880	.	+	.	ID=gene3759;Name=YPD4_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18850
NC_017154.1	Protein Homology	CDS	4077710	4077880	.	+	0	ID=cds3694;Parent=gene3759;Dbxref=Genbank:WP_025470773.1;Name=WP_025470773.1;gbkey=CDS;product=transposase;protein_id=WP_025470773.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4077724	4078441	.	+	.	ID=id309;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4077870	4078328	.	+	.	ID=gene3760;Name=YPD4_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18855;old_locus_tag=YPD4_3219
NC_017154.1	Protein Homology	CDS	4077870	4078328	.	+	0	ID=cds3695;Parent=gene3760;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	4078450	4078905	.	-	.	ID=gene3761;Name=YPD4_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18860;old_locus_tag=YPD4_3220
NC_017154.1	Protein Homology	CDS	4078450	4078905	.	-	0	ID=cds3696;Parent=gene3761;Dbxref=Genbank:WP_002210157.1;Name=WP_002210157.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210157.1;transl_table=11
NC_017154.1	RefSeq	gene	4079045	4079783	.	-	.	ID=gene3762;Name=YPD4_RS18865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS18865;pseudo=true
NC_017154.1	Protein Homology	CDS	4079045	4079783	.	-	0	ID=cds3697;Parent=gene3762;exception=annotated by transcript or proteomic data;gbkey=CDS;product=lysine transporter LysM;pseudo=true;transl_except=(pos:complement(4079273..4079275)%2Caa:Other);transl_table=11
NC_017154.1	RefSeq	gene	4080126	4080746	.	+	.	ID=gene3763;Name=YPD4_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18870;old_locus_tag=YPD4_3222
NC_017154.1	Protein Homology	CDS	4080126	4080746	.	+	0	ID=cds3698;Parent=gene3763;Dbxref=Genbank:WP_002228198.1;Name=WP_002228198.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228198.1;transl_table=11
NC_017154.1	RefSeq	gene	4080844	4081509	.	-	.	ID=gene3764;Name=YPD4_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18875;old_locus_tag=YPD4_3223
NC_017154.1	Protein Homology	CDS	4080844	4081509	.	-	0	ID=cds3699;Parent=gene3764;Dbxref=Genbank:WP_002210159.1;Name=WP_002210159.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_002210159.1;transl_table=11
NC_017154.1	RefSeq	gene	4081664	4083633	.	-	.	ID=gene3765;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=pseudogene;locus_tag=YPD4_RS18880;pseudo=true
NC_017154.1	Protein Homology	CDS	4081664	4083633	.	-	0	ID=cds3700;Parent=gene3765;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=cpdB;product=2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4084068	4084808	.	+	.	ID=gene3766;Name=YPD4_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18885;old_locus_tag=YPD4_3226
NC_017154.1	Protein Homology	CDS	4084068	4084808	.	+	0	ID=cds3701;Parent=gene3766;Dbxref=Genbank:WP_002220539.1;Name=WP_002220539.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=3'-5'-bisphosphate nucleotidase;protein_id=WP_002220539.1;transl_table=11
NC_017154.1	RefSeq	gene	4084811	4085374	.	-	.	ID=gene3767;Name=YPD4_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18890;old_locus_tag=YPD4_3227
NC_017154.1	Protein Homology	CDS	4084811	4085374	.	-	0	ID=cds3702;Parent=gene3767;Dbxref=Genbank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210162.1;transl_table=11
NC_017154.1	RefSeq	gene	4085710	4085922	.	+	.	ID=gene3768;Name=YPD4_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18895
NC_017154.1	Protein Homology	CDS	4085710	4085922	.	+	0	ID=cds3703;Parent=gene3768;Dbxref=Genbank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210163.1;transl_table=11
NC_017154.1	RefSeq	gene	4086030	4087361	.	-	.	ID=gene3769;Name=YPD4_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18900;old_locus_tag=YPD4_3228
NC_017154.1	Protein Homology	CDS	4086030	4087361	.	-	0	ID=cds3704;Parent=gene3769;Dbxref=Genbank:WP_002210164.1;Name=WP_002210164.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210164.1;transl_table=11
NC_017154.1	RefSeq	gene	4087620	4088258	.	-	.	ID=gene3770;Name=YPD4_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18905;old_locus_tag=YPD4_3229
NC_017154.1	Protein Homology	CDS	4087620	4088258	.	-	0	ID=cds3705;Parent=gene3770;Dbxref=Genbank:WP_002210165.1;Name=WP_002210165.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=WP_002210165.1;transl_table=11
NC_017154.1	RefSeq	gene	4088533	4090269	.	+	.	ID=gene3771;Name=YPD4_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18910;old_locus_tag=YPD4_3230
NC_017154.1	Protein Homology	CDS	4088533	4090269	.	+	0	ID=cds3706;Parent=gene3771;Dbxref=Genbank:WP_002210166.1;Name=WP_002210166.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210166.1;transl_table=11
NC_017154.1	RefSeq	gene	4090266	4094183	.	+	.	ID=gene3772;Name=YPD4_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18915;old_locus_tag=YPD4_3231
NC_017154.1	Protein Homology	CDS	4090266	4094183	.	+	0	ID=cds3707;Parent=gene3772;Dbxref=Genbank:WP_002210167.1;Name=WP_002210167.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210167.1;transl_table=11
NC_017154.1	RefSeq	gene	4094186	4094542	.	+	.	ID=gene3773;Name=YPD4_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18920;old_locus_tag=YPD4_3232
NC_017154.1	Protein Homology	CDS	4094186	4094542	.	+	0	ID=cds3708;Parent=gene3773;Dbxref=Genbank:WP_002210168.1;Name=WP_002210168.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210168.1;transl_table=11
NC_017154.1	RefSeq	gene	4094660	4095187	.	-	.	ID=gene3774;Name=YPD4_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18925;old_locus_tag=YPD4_3233
NC_017154.1	Protein Homology	CDS	4094660	4095187	.	-	0	ID=cds3709;Parent=gene3774;Dbxref=Genbank:WP_002210169.1;Name=WP_002210169.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_002210169.1;transl_table=11
NC_017154.1	RefSeq	gene	4095387	4096400	.	-	.	ID=gene3775;Name=YPD4_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18930;old_locus_tag=YPD4_3234
NC_017154.1	Protein Homology	CDS	4095387	4096400	.	-	0	ID=cds3710;Parent=gene3775;Dbxref=Genbank:WP_002216946.1;Name=WP_002216946.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002216946.1;transl_table=11
NC_017154.1	RefSeq	gene	4096571	4097953	.	+	.	ID=gene3776;Name=YPD4_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18935;old_locus_tag=YPD4_3235
NC_017154.1	Protein Homology	CDS	4096571	4097953	.	+	0	ID=cds3711;Parent=gene3776;Dbxref=Genbank:WP_002210171.1;Name=WP_002210171.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_002210171.1;transl_table=11
NC_017154.1	RefSeq	gene	4098040	4098246	.	+	.	ID=gene3777;Name=YPD4_RS18940;gbkey=Gene;gene_biotype=other;locus_tag=YPD4_RS18940
NC_017154.1	RefSeq	repeat_region	4098056	4098224	.	+	.	ID=id310;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4098249	4098512	.	-	.	ID=gene3778;Name=YPD4_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18945
NC_017154.1	Protein Homology	CDS	4098249	4098512	.	-	0	ID=cds3712;Parent=gene3778;Dbxref=Genbank:WP_002210172.1;Name=WP_002210172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210172.1;transl_table=11
NC_017154.1	RefSeq	gene	4098901	4099371	.	-	.	ID=gene3779;Name=YPD4_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18950;old_locus_tag=YPD4_3236
NC_017154.1	Protein Homology	CDS	4098901	4099371	.	-	0	ID=cds3713;Parent=gene3779;Dbxref=Genbank:WP_002210173.1;Name=WP_002210173.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_002210173.1;transl_table=11
NC_017154.1	RefSeq	gene	4099835	4100773	.	+	.	ID=gene3780;Name=YPD4_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18955;old_locus_tag=YPD4_3237
NC_017154.1	Protein Homology	CDS	4099835	4100773	.	+	0	ID=cds3714;Parent=gene3780;Dbxref=Genbank:WP_002210174.1;Name=WP_002210174.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_002210174.1;transl_table=11
NC_017154.1	RefSeq	gene	4101207	4101482	.	-	.	ID=gene3781;Name=YPD4_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18960
NC_017154.1	Protein Homology	CDS	4101207	4101482	.	-	0	ID=cds3715;Parent=gene3781;Dbxref=Genbank:WP_002210175.1;Name=WP_002210175.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210175.1;transl_table=11
NC_017154.1	RefSeq	gene	4101666	4102013	.	+	.	ID=gene3782;Name=YPD4_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18965;old_locus_tag=YPD4_3238
NC_017154.1	Protein Homology	CDS	4101666	4102013	.	+	0	ID=cds3716;Parent=gene3782;Dbxref=Genbank:WP_002210176.1;Name=WP_002210176.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11
NC_017154.1	RefSeq	gene	4102110	4103081	.	-	.	ID=gene3783;Name=YPD4_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18970;old_locus_tag=YPD4_3239
NC_017154.1	Protein Homology	CDS	4102110	4103081	.	-	0	ID=cds3717;Parent=gene3783;Dbxref=Genbank:WP_002210177.1;Name=WP_002210177.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_002210177.1;transl_table=11
NC_017154.1	RefSeq	gene	4103341	4103652	.	+	.	ID=gene3784;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=YPD4_RS18975;old_locus_tag=YPD4_3240
NC_017154.1	Protein Homology	CDS	4103341	4103652	.	+	0	ID=cds3718;Parent=gene3784;Dbxref=Genbank:WP_002210178.1;Name=WP_002210178.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11
NC_017154.1	RefSeq	gene	4103672	4103929	.	+	.	ID=gene3785;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=YPD4_RS18980
NC_017154.1	Protein Homology	CDS	4103672	4103929	.	+	0	ID=cds3719;Parent=gene3785;Dbxref=Genbank:WP_002210179.1;Name=WP_002210179.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11
NC_017154.1	RefSeq	gene	4104017	4105003	.	+	.	ID=gene3786;Name=YPD4_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18985;old_locus_tag=YPD4_3241
NC_017154.1	Protein Homology	CDS	4104017	4105003	.	+	0	ID=cds3720;Parent=gene3786;Dbxref=Genbank:WP_002210180.1;Name=WP_002210180.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210180.1;transl_table=11
NC_017154.1	RefSeq	gene	4105004	4106176	.	+	.	ID=gene3787;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=YPD4_RS18990;old_locus_tag=YPD4_3242
NC_017154.1	Protein Homology	CDS	4105004	4106176	.	+	0	ID=cds3721;Parent=gene3787;Dbxref=Genbank:WP_002210181.1;Name=WP_002210181.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase Obg;protein_id=WP_002210181.1;transl_table=11
NC_017154.1	RefSeq	gene	4106271	4107338	.	-	.	ID=gene3788;Name=YPD4_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS18995;old_locus_tag=YPD4_3243
NC_017154.1	Protein Homology	CDS	4106271	4107338	.	-	0	ID=cds3722;Parent=gene3788;Dbxref=Genbank:WP_002210182.1;Name=WP_002210182.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002210182.1;transl_table=11
NC_017154.1	RefSeq	gene	4107335	4107997	.	-	.	ID=gene3789;Name=YPD4_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19000;old_locus_tag=YPD4_3244
NC_017154.1	Protein Homology	CDS	4107335	4107997	.	-	0	ID=cds3723;Parent=gene3789;Dbxref=Genbank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210183.1;transl_table=11
NC_017154.1	RefSeq	gene	4108003	4109451	.	-	.	ID=gene3790;Name=YPD4_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19005;old_locus_tag=YPD4_3245
NC_017154.1	Protein Homology	CDS	4108003	4109451	.	-	0	ID=cds3724;Parent=gene3790;Dbxref=Genbank:WP_002217314.1;Name=WP_002217314.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002217314.1;transl_table=11
NC_017154.1	RefSeq	gene	4109709	4110185	.	+	.	ID=gene3791;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=YPD4_RS19010;old_locus_tag=YPD4_3246
NC_017154.1	Protein Homology	CDS	4109709	4110185	.	+	0	ID=cds3725;Parent=gene3791;Dbxref=Genbank:WP_002210184.1;Name=WP_002210184.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_002210184.1;transl_table=11
NC_017154.1	RefSeq	gene	4110315	4110605	.	-	.	ID=gene3792;Name=YPD4_RS19015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS19015;partial=true;pseudo=true;start_range=.,4110315
NC_017154.1	Protein Homology	CDS	4110315	4110605	.	-	0	ID=cds3726;Parent=gene3792;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=RNA-binding protein;pseudo=true;start_range=.,4110315;transl_table=11
NC_017154.1	RefSeq	gene	4110752	4111381	.	+	.	ID=gene3793;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=YPD4_RS19020;old_locus_tag=YPD4_3248
NC_017154.1	Protein Homology	CDS	4110752	4111381	.	+	0	ID=cds3727;Parent=gene3793;Dbxref=Genbank:WP_002228196.1;Name=WP_002228196.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase E;protein_id=WP_002228196.1;transl_table=11
NC_017154.1	RefSeq	gene	4111550	4113374	.	+	.	ID=gene3794;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=pseudogene;gene_synonym=ftsH;locus_tag=YPD4_RS19025;old_locus_tag=YPD4_3249;pseudo=true
NC_017154.1	Protein Homology	CDS	4111550	4113374	.	+	0	ID=cds3728;Parent=gene3794;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4113494	4114327	.	+	.	ID=gene3795;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=YPD4_RS19030;old_locus_tag=YPD4_3250
NC_017154.1	Protein Homology	CDS	4113494	4114327	.	+	0	ID=cds3729;Parent=gene3795;Dbxref=Genbank:WP_002210188.1;Name=WP_002210188.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_002210188.1;transl_table=11
NC_017154.1	RefSeq	gene	4114337	4115677	.	+	.	ID=gene3796;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=YPD4_RS19035;old_locus_tag=YPD4_3251
NC_017154.1	Protein Homology	CDS	4114337	4115677	.	+	0	ID=cds3730;Parent=gene3796;Dbxref=Genbank:WP_002210189.1;Name=WP_002210189.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11
NC_017154.1	RefSeq	gene	4115900	4116235	.	+	.	ID=gene3797;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=YPD4_RS19040
NC_017154.1	Protein Homology	CDS	4115900	4116235	.	+	0	ID=cds3731;Parent=gene3797;Dbxref=Genbank:WP_002210190.1;Name=WP_002210190.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11
NC_017154.1	RefSeq	gene	4116328	4116414	.	+	.	ID=gene3798;Name=YPD4_RS19045;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19045;old_locus_tag=YPD4_t51
NC_017154.1	tRNAscan-SE	tRNA	4116328	4116414	.	+	.	ID=rna60;Parent=gene3798;anticodon=(pos:4116362..4116364);gbkey=tRNA;product=tRNA-Leu
NC_017154.1	tRNAscan-SE	exon	4116328	4116414	.	+	.	ID=id311;Parent=rna60;anticodon=(pos:4116362..4116364);gbkey=tRNA;product=tRNA-Leu
NC_017154.1	RefSeq	gene	4116475	4116551	.	+	.	ID=gene3799;Name=YPD4_RS19050;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19050;old_locus_tag=YPD4_t52
NC_017154.1	tRNAscan-SE	tRNA	4116475	4116551	.	+	.	ID=rna61;Parent=gene3799;anticodon=(pos:4116509..4116511);gbkey=tRNA;product=tRNA-Met
NC_017154.1	tRNAscan-SE	exon	4116475	4116551	.	+	.	ID=id312;Parent=rna61;anticodon=(pos:4116509..4116511);gbkey=tRNA;product=tRNA-Met
NC_017154.1	RefSeq	gene	4116767	4117219	.	+	.	ID=gene3800;Name=YPD4_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19055;old_locus_tag=YPD4_3252
NC_017154.1	Protein Homology	CDS	4116767	4117219	.	+	0	ID=cds3732;Parent=gene3800;Dbxref=Genbank:WP_002222054.1;Name=WP_002222054.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation factor RimP;protein_id=WP_002222054.1;transl_table=11
NC_017154.1	RefSeq	gene	4117241	4118728	.	+	.	ID=gene3801;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=YPD4_RS19060;old_locus_tag=YPD4_3253
NC_017154.1	Protein Homology	CDS	4117241	4118728	.	+	0	ID=cds3733;Parent=gene3801;Dbxref=Genbank:WP_002209253.1;Name=WP_002209253.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11
NC_017154.1	RefSeq	gene	4118753	4121431	.	+	.	ID=gene3802;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=YPD4_RS19065;old_locus_tag=YPD4_3254
NC_017154.1	Protein Homology	CDS	4118753	4121431	.	+	0	ID=cds3734;Parent=gene3802;Dbxref=Genbank:WP_002223151.1;Name=WP_002223151.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_002223151.1;transl_table=11
NC_017154.1	RefSeq	gene	4121497	4121907	.	+	.	ID=gene3803;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=YPD4_RS19070;old_locus_tag=YPD4_3255
NC_017154.1	Protein Homology	CDS	4121497	4121907	.	+	0	ID=cds3735;Parent=gene3803;Dbxref=Genbank:WP_002209255.1;Name=WP_002209255.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_002209255.1;transl_table=11
NC_017154.1	RefSeq	gene	4121907	4122881	.	+	.	ID=gene3804;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=YPD4_RS19075;old_locus_tag=YPD4_3256
NC_017154.1	Protein Homology	CDS	4121907	4122881	.	+	0	ID=cds3736;Parent=gene3804;Dbxref=Genbank:WP_002209256.1;Name=WP_002209256.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_002209256.1;transl_table=11
NC_017154.1	RefSeq	gene	4123003	4123272	.	+	.	ID=gene3805;Name=YPD4_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19080
NC_017154.1	Protein Homology	CDS	4123003	4123272	.	+	0	ID=cds3737;Parent=gene3805;Dbxref=Genbank:WP_002209257.1;Name=WP_002209257.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4123303	4124746	.	+	.	ID=id313;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4123359	4123874	.	+	.	ID=gene3806;Name=YPD4_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19085;old_locus_tag=YPD4_3257
NC_017154.1	Protein Homology	CDS	4123359	4123874	.	+	0	ID=cds3738;Parent=gene3806;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11
NC_017154.1	RefSeq	gene	4123928	4124526	.	+	.	ID=gene3807;Name=YPD4_RS19090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS19090;pseudo=true
NC_017154.1	Protein Homology	CDS	4123928	4124526	.	+	0	ID=cds3739;Parent=gene3807;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4124717	4125829	.	-	.	ID=gene3808;Name=YPD4_RS19095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS19095;partial=true;pseudo=true;start_range=.,4124717
NC_017154.1	Protein Homology	CDS	4124717	4125829	.	-	0	ID=cds3740;Parent=gene3808;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type VI secretion protein;pseudo=true;start_range=.,4124717;transl_table=11
NC_017154.1	RefSeq	gene	4125829	4126269	.	-	.	ID=gene3809;Name=YPD4_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19100;old_locus_tag=YPD4_3259
NC_017154.1	Protein Homology	CDS	4125829	4126269	.	-	0	ID=cds3741;Parent=gene3809;Dbxref=Genbank:WP_002212100.1;Name=WP_002212100.1;gbkey=CDS;product=lysozyme;protein_id=WP_002212100.1;transl_table=11
NC_017154.1	RefSeq	gene	4126276	4127757	.	-	.	ID=gene3810;Name=YPD4_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19105;old_locus_tag=YPD4_3260
NC_017154.1	Protein Homology	CDS	4126276	4127757	.	-	0	ID=cds3742;Parent=gene3810;Dbxref=Genbank:WP_002212099.1;Name=WP_002212099.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212099.1;transl_table=11
NC_017154.1	RefSeq	gene	4127825	4128322	.	-	.	ID=gene3811;Name=YPD4_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19110;old_locus_tag=YPD4_3261
NC_017154.1	Protein Homology	CDS	4127825	4128322	.	-	0	ID=cds3743;Parent=gene3811;Dbxref=Genbank:WP_002212098.1;Name=WP_002212098.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212098.1;transl_table=11
NC_017154.1	RefSeq	gene	4128846	4129364	.	+	.	ID=gene3812;Name=YPD4_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19115;old_locus_tag=YPD4_3262
NC_017154.1	Protein Homology	CDS	4128846	4129364	.	+	0	ID=cds3744;Parent=gene3812;Dbxref=Genbank:WP_002212097.1;Name=WP_002212097.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212097.1;transl_table=11
NC_017154.1	RefSeq	gene	4129516	4129794	.	-	.	ID=gene3813;Name=YPD4_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19120
NC_017154.1	Protein Homology	CDS	4129516	4129794	.	-	0	ID=cds3745;Parent=gene3813;Dbxref=Genbank:WP_002212095.1;Name=WP_002212095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212095.1;transl_table=11
NC_017154.1	RefSeq	gene	4130265	4131176	.	-	.	ID=gene3814;Name=YPD4_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19125;old_locus_tag=YPD4_3263
NC_017154.1	Protein Homology	CDS	4130265	4131176	.	-	0	ID=cds3746;Parent=gene3814;Dbxref=Genbank:WP_002212093.1;Name=WP_002212093.1;gbkey=CDS;product=maltose operon protein;protein_id=WP_002212093.1;transl_table=11
NC_017154.1	RefSeq	gene	4131417	4132689	.	-	.	ID=gene3815;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=pseudogene;locus_tag=YPD4_RS19130;old_locus_tag=YPD4_3264;pseudo=true
NC_017154.1	Protein Homology	CDS	4131417	4132689	.	-	0	ID=cds3747;Parent=gene3815;Note=porin involved in the transport of maltose and maltodextrins;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=lamB;product=maltoporin;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4132760	4133869	.	-	.	ID=gene3816;Name=YPD4_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19135;old_locus_tag=YPD4_3265
NC_017154.1	Protein Homology	CDS	4132760	4133869	.	-	0	ID=cds3748;Parent=gene3816;Dbxref=Genbank:WP_002212091.1;Name=WP_002212091.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11
NC_017154.1	RefSeq	gene	4133873	4134109	.	-	.	ID=gene3817;Name=YPD4_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19140
NC_017154.1	Protein Homology	CDS	4133873	4134109	.	-	0	ID=cds3749;Parent=gene3817;Dbxref=Genbank:WP_002221973.1;Name=WP_002221973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221973.1;transl_table=11
NC_017154.1	RefSeq	gene	4134671	4135882	.	+	.	ID=gene3818;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=YPD4_RS19145;old_locus_tag=YPD4_3266
NC_017154.1	Protein Homology	CDS	4134671	4135882	.	+	0	ID=cds3750;Parent=gene3818;Dbxref=Genbank:WP_002212089.1;Name=WP_002212089.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose ABC transporter substrate-binding protein;protein_id=WP_002212089.1;transl_table=11
NC_017154.1	RefSeq	gene	4136069	4137646	.	+	.	ID=gene3819;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=YPD4_RS19150;old_locus_tag=YPD4_3267
NC_017154.1	Protein Homology	CDS	4136069	4137646	.	+	0	ID=cds3751;Parent=gene3819;Dbxref=Genbank:WP_002212088.1;Name=WP_002212088.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=WP_002212088.1;transl_table=11
NC_017154.1	RefSeq	gene	4137660	4138550	.	+	.	ID=gene3820;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=YPD4_RS19155;old_locus_tag=YPD4_3268
NC_017154.1	Protein Homology	CDS	4137660	4138550	.	+	0	ID=cds3752;Parent=gene3820;Dbxref=Genbank:WP_002212087.1;Name=WP_002212087.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=WP_002212087.1;transl_table=11
NC_017154.1	RefSeq	gene	4138693	4139100	.	-	.	ID=gene3821;Name=YPD4_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19160;old_locus_tag=YPD4_3269
NC_017154.1	Protein Homology	CDS	4138693	4139100	.	-	0	ID=cds3753;Parent=gene3821;Dbxref=Genbank:WP_002212086.1;Name=WP_002212086.1;gbkey=CDS;product=protein PsiE;protein_id=WP_002212086.1;transl_table=11
NC_017154.1	RefSeq	gene	4139235	4140881	.	-	.	ID=gene3822;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=YPD4_RS19165;old_locus_tag=YPD4_3270
NC_017154.1	Protein Homology	CDS	4139235	4140881	.	-	0	ID=cds3754;Parent=gene3822;Dbxref=Genbank:WP_002212085.1;Name=WP_002212085.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_002212085.1;transl_table=11
NC_017154.1	RefSeq	gene	4141251	4142636	.	+	.	ID=gene3823;Name=YPD4_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19170;old_locus_tag=YPD4_3271
NC_017154.1	Protein Homology	CDS	4141251	4142636	.	+	0	ID=cds3755;Parent=gene3823;Dbxref=Genbank:WP_002212084.1;Name=WP_002212084.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=WP_002212084.1;transl_table=11
NC_017154.1	RefSeq	gene	4143394	4144893	.	+	.	ID=gene3824;Name=YPD4_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19175;old_locus_tag=YPD4_3273
NC_017154.1	Protein Homology	CDS	4143394	4144893	.	+	0	ID=cds3756;Parent=gene3824;Dbxref=Genbank:WP_002228765.1;Name=WP_002228765.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_002228765.1;transl_table=11
NC_017154.1	RefSeq	gene	4144963	4149870	.	+	.	ID=gene3825;Name=YPD4_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19180;old_locus_tag=YPD4_3274
NC_017154.1	Protein Homology	CDS	4144963	4149870	.	+	0	ID=cds3757;Parent=gene3825;Dbxref=Genbank:WP_015684031.1;Name=WP_015684031.1;gbkey=CDS;product=hemolysin;protein_id=WP_015684031.1;transl_table=11
NC_017154.1	RefSeq	gene	4149966	4153661	.	-	.	ID=gene3826;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=YPD4_RS19185;old_locus_tag=YPD4_3275
NC_017154.1	Protein Homology	CDS	4149966	4153661	.	-	0	ID=cds3758;Parent=gene3826;Dbxref=Genbank:WP_002212080.1;Name=WP_002212080.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=WP_002212080.1;transl_table=11
NC_017154.1	RefSeq	gene	4153876	4154223	.	+	.	ID=gene3827;Name=YPD4_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19190;old_locus_tag=YPD4_3276
NC_017154.1	Protein Homology	CDS	4153876	4154223	.	+	0	ID=cds3759;Parent=gene3827;Dbxref=Genbank:WP_002228764.1;Name=WP_002228764.1;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002228764.1;transl_table=11
NC_017154.1	RefSeq	gene	4154208	4154720	.	+	.	ID=gene3828;Name=YPD4_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19195;old_locus_tag=YPD4_3277
NC_017154.1	Protein Homology	CDS	4154208	4154720	.	+	0	ID=cds3760;Parent=gene3828;Dbxref=Genbank:WP_002355282.1;Name=WP_002355282.1;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002355282.1;transl_table=11
NC_017154.1	RefSeq	gene	4154840	4156567	.	-	.	ID=gene3829;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=YPD4_RS19200;old_locus_tag=YPD4_3278
NC_017154.1	Protein Homology	CDS	4154840	4156567	.	-	0	ID=cds3761;Parent=gene3829;Dbxref=Genbank:WP_002212079.1;Name=WP_002212079.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase;protein_id=WP_002212079.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4156605	4156779	.	+	.	ID=id314;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4156823	4158130	.	-	.	ID=gene3830;Name=YPD4_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19205;old_locus_tag=YPD4_3279
NC_017154.1	Protein Homology	CDS	4156823	4158130	.	-	0	ID=cds3762;Parent=gene3830;Dbxref=Genbank:WP_002212078.1;Name=WP_002212078.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_002212078.1;transl_table=11
NC_017154.1	RefSeq	gene	4158177	4159775	.	-	.	ID=gene3831;Name=YPD4_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19210;old_locus_tag=YPD4_3280
NC_017154.1	Protein Homology	CDS	4158177	4159775	.	-	0	ID=cds3763;Parent=gene3831;Dbxref=Genbank:WP_002212077.1;Name=WP_002212077.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;product=malate synthase;protein_id=WP_002212077.1;transl_table=11
NC_017154.1	RefSeq	gene	4160196	4161125	.	-	.	ID=gene3832;Name=YPD4_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19215;old_locus_tag=YPD4_3281
NC_017154.1	Protein Homology	CDS	4160196	4161125	.	-	0	ID=cds3764;Parent=gene3832;Dbxref=Genbank:WP_002212076.1;Name=WP_002212076.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=WP_002212076.1;transl_table=11
NC_017154.1	RefSeq	gene	4161193	4161465	.	+	.	ID=gene3833;Name=YPD4_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19220
NC_017154.1	Protein Homology	CDS	4161193	4161465	.	+	0	ID=cds3765;Parent=gene3833;Dbxref=Genbank:WP_002430138.1;Name=WP_002430138.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430138.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4161855	4161988	.	+	.	ID=id315;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4161865	4161980	.	-	.	ID=gene3834;Name=YPD4_RS19225;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS19225;old_locus_tag=YPD4_r11
NC_017154.1	cmsearch	rRNA	4161865	4161980	.	-	.	ID=rna62;Parent=gene3834;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	cmsearch	exon	4161865	4161980	.	-	.	ID=id316;Parent=rna62;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	RefSeq	gene	4162021	4162096	.	-	.	ID=gene3835;Name=YPD4_RS19230;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19230;old_locus_tag=YPD4_t53
NC_017154.1	tRNAscan-SE	tRNA	4162021	4162096	.	-	.	ID=rna63;Parent=gene3835;anticodon=(pos:complement(4162061..4162063));gbkey=tRNA;product=tRNA-Thr
NC_017154.1	tRNAscan-SE	exon	4162021	4162096	.	-	.	ID=id317;Parent=rna63;anticodon=(pos:complement(4162061..4162063));gbkey=tRNA;product=tRNA-Thr
NC_017154.1	RefSeq	repeat_region	4162105	4165409	.	+	.	ID=id318;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4162112	4162227	.	-	.	ID=gene3836;Name=YPD4_RS19235;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS19235
NC_017154.1	cmsearch	rRNA	4162112	4162227	.	-	.	ID=rna64;Parent=gene3836;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	cmsearch	exon	4162112	4162227	.	-	.	ID=id319;Parent=rna64;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	RefSeq	gene	4162319	4165252	.	-	.	ID=gene3837;Name=YPD4_RS19240;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS19240;old_locus_tag=YPD4_r13
NC_017154.1	RefSeq	rRNA	4162319	4165252	.	-	.	ID=rna65;Parent=gene3837;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	exon	4162319	4165252	.	-	.	ID=id320;Parent=rna65;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	gene	4165462	4165537	.	-	.	ID=gene3838;Name=YPD4_RS19245;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19245;old_locus_tag=YPD4_t54
NC_017154.1	tRNAscan-SE	tRNA	4165462	4165537	.	-	.	ID=rna66;Parent=gene3838;anticodon=(pos:complement(4165502..4165504));gbkey=tRNA;product=tRNA-Ala
NC_017154.1	tRNAscan-SE	exon	4165462	4165537	.	-	.	ID=id321;Parent=rna66;anticodon=(pos:complement(4165502..4165504));gbkey=tRNA;product=tRNA-Ala
NC_017154.1	RefSeq	gene	4165589	4165665	.	-	.	ID=gene3839;Name=YPD4_RS19250;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19250;old_locus_tag=YPD4_t55
NC_017154.1	tRNAscan-SE	tRNA	4165589	4165665	.	-	.	ID=rna67;Parent=gene3839;anticodon=(pos:complement(4165629..4165631));gbkey=tRNA;product=tRNA-Ile
NC_017154.1	tRNAscan-SE	exon	4165589	4165665	.	-	.	ID=id322;Parent=rna67;anticodon=(pos:complement(4165629..4165631));gbkey=tRNA;product=tRNA-Ile
NC_017154.1	RefSeq	repeat_region	4165725	4167517	.	+	.	ID=id323;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4165765	4167313	.	-	.	ID=gene3840;Name=YPD4_RS19255;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS19255;old_locus_tag=YPD4_r14
NC_017154.1	RefSeq	rRNA	4165765	4167313	.	-	.	ID=rna68;Parent=gene3840;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	exon	4165765	4167313	.	-	.	ID=id324;Parent=rna68;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	gene	4167581	4167811	.	-	.	ID=gene3841;Name=YPD4_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22440
NC_017154.1	Protein Homology	CDS	4167581	4167811	.	-	0	ID=cds3766;Parent=gene3841;Dbxref=Genbank:WP_046155092.1;Name=WP_046155092.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155092.1;transl_table=11
NC_017154.1	RefSeq	gene	4167969	4169560	.	+	.	ID=gene3842;Name=purH;gbkey=Gene;gene=purH;gene_biotype=pseudogene;locus_tag=YPD4_RS19265;pseudo=true
NC_017154.1	Protein Homology	CDS	4167969	4169560	.	+	0	ID=cds3767;Parent=gene3842;Note=involved in de novo purine biosynthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=purH;product=phosphoribosylaminoimidazolecarboxamide formyltransferase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4169620	4170906	.	+	.	ID=gene3843;Name=YPD4_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19270;old_locus_tag=YPD4_3283
NC_017154.1	Protein Homology	CDS	4169620	4170906	.	+	0	ID=cds3768;Parent=gene3843;Dbxref=Genbank:WP_002210691.1;Name=WP_002210691.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_002210691.1;transl_table=11
NC_017154.1	RefSeq	gene	4171054	4171707	.	-	.	ID=gene3844;Name=YPD4_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19275;old_locus_tag=YPD4_3284
NC_017154.1	Protein Homology	CDS	4171054	4171707	.	-	0	ID=cds3769;Parent=gene3844;Dbxref=Genbank:WP_002355296.1;Name=WP_002355296.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355296.1;transl_table=11
NC_017154.1	RefSeq	gene	4171757	4172032	.	-	.	ID=gene3845;Name=YPD4_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19280
NC_017154.1	Protein Homology	CDS	4171757	4172032	.	-	0	ID=cds3770;Parent=gene3845;Dbxref=Genbank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210689.1;transl_table=11
NC_017154.1	RefSeq	gene	4172221	4172811	.	-	.	ID=gene3846;Name=YPD4_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19285;old_locus_tag=YPD4_3285
NC_017154.1	Protein Homology	CDS	4172221	4172811	.	-	0	ID=cds3771;Parent=gene3846;Dbxref=Genbank:WP_002210688.1;Name=WP_002210688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210688.1;transl_table=11
NC_017154.1	RefSeq	gene	4172857	4173561	.	-	.	ID=gene3847;Name=YPD4_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19290;old_locus_tag=YPD4_3286
NC_017154.1	Protein Homology	CDS	4172857	4173561	.	-	0	ID=cds3772;Parent=gene3847;Dbxref=Genbank:WP_002217884.1;Name=WP_002217884.1;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;gbkey=CDS;product=endonuclease V;protein_id=WP_002217884.1;transl_table=11
NC_017154.1	RefSeq	gene	4173627	4174694	.	-	.	ID=gene3848;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=YPD4_RS19295;old_locus_tag=YPD4_3287
NC_017154.1	Protein Homology	CDS	4173627	4174694	.	-	0	ID=cds3773;Parent=gene3848;Dbxref=Genbank:WP_002210686.1;Name=WP_002210686.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=WP_002210686.1;transl_table=11
NC_017154.1	RefSeq	gene	4174813	4175556	.	-	.	ID=gene3849;Name=YPD4_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19300;old_locus_tag=YPD4_3288
NC_017154.1	Protein Homology	CDS	4174813	4175556	.	-	0	ID=cds3774;Parent=gene3849;Dbxref=Genbank:WP_002355297.1;Name=WP_002355297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355297.1;transl_table=11
NC_017154.1	RefSeq	gene	4175691	4176473	.	-	.	ID=gene3850;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=YPD4_RS19305;old_locus_tag=YPD4_3289
NC_017154.1	Protein Homology	CDS	4175691	4176473	.	-	0	ID=cds3775;Parent=gene3850;Dbxref=Genbank:WP_002210684.1;Name=WP_002210684.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_002210684.1;transl_table=11
NC_017154.1	RefSeq	gene	4176570	4177079	.	+	.	ID=gene3851;Name=YPD4_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19310;old_locus_tag=YPD4_3290
NC_017154.1	Protein Homology	CDS	4176570	4177079	.	+	0	ID=cds3776;Parent=gene3851;Dbxref=Genbank:WP_002210683.1;Name=WP_002210683.1;gbkey=CDS;product=regulator of sigma D;protein_id=WP_002210683.1;transl_table=11
NC_017154.1	RefSeq	gene	4177202	4177462	.	+	.	ID=gene3852;Name=YPD4_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19315
NC_017154.1	Protein Homology	CDS	4177202	4177462	.	+	0	ID=cds3777;Parent=gene3852;Dbxref=Genbank:WP_002228187.1;Name=WP_002228187.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228187.1;transl_table=11
NC_017154.1	RefSeq	gene	4177455	4179500	.	+	.	ID=gene3853;Name=YPD4_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19320;old_locus_tag=YPD4_3291
NC_017154.1	Protein Homology	CDS	4177455	4179500	.	+	0	ID=cds3778;Parent=gene3853;Dbxref=Genbank:WP_002210682.1;Name=WP_002210682.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=phosphomethylpyrimidine synthase;protein_id=WP_002210682.1;transl_table=11
NC_017154.1	RefSeq	gene	4179487	4180161	.	+	.	ID=gene3854;Name=YPD4_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19325;old_locus_tag=YPD4_3292
NC_017154.1	Protein Homology	CDS	4179487	4180161	.	+	0	ID=cds3779;Parent=gene3854;Dbxref=Genbank:WP_002210681.1;Name=WP_002210681.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=WP_002210681.1;transl_table=11
NC_017154.1	RefSeq	gene	4180151	4180948	.	+	.	ID=gene3855;Name=YPD4_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19330;old_locus_tag=YPD4_3293
NC_017154.1	Protein Homology	CDS	4180151	4180948	.	+	0	ID=cds3780;Parent=gene3855;Dbxref=Genbank:WP_002210680.1;Name=WP_002210680.1;gbkey=CDS;product=molybdopterin biosynthesis protein MoeB;protein_id=WP_002210680.1;transl_table=11
NC_017154.1	RefSeq	gene	4180945	4181160	.	+	.	ID=gene3856;Name=YPD4_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19335
NC_017154.1	Protein Homology	CDS	4180945	4181160	.	+	0	ID=cds3781;Parent=gene3856;Dbxref=Genbank:WP_002217275.1;Name=WP_002217275.1;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_002217275.1;transl_table=11
NC_017154.1	RefSeq	gene	4181162	4181977	.	+	.	ID=gene3857;Name=YPD4_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19340;old_locus_tag=YPD4_3294
NC_017154.1	Protein Homology	CDS	4181162	4181977	.	+	0	ID=cds3782;Parent=gene3857;Dbxref=Genbank:WP_002228257.1;Name=WP_002228257.1;gbkey=CDS;product=thiazole synthase;protein_id=WP_002228257.1;transl_table=11
NC_017154.1	RefSeq	gene	4181970	4183100	.	+	.	ID=gene3858;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=YPD4_RS19345;old_locus_tag=YPD4_3295
NC_017154.1	Protein Homology	CDS	4181970	4183100	.	+	0	ID=cds3783;Parent=gene3858;Dbxref=Genbank:WP_002210678.1;Name=WP_002210678.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=WP_002210678.1;transl_table=11
NC_017154.1	RefSeq	gene	4183143	4183256	.	-	.	ID=gene3859;Name=YPD4_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19350
NC_017154.1	Protein Homology	CDS	4183143	4183256	.	-	0	ID=cds3784;Parent=gene3859;Dbxref=Genbank:WP_002224232.1;Name=WP_002224232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224232.1;transl_table=11
NC_017154.1	RefSeq	gene	4183375	4183542	.	+	.	ID=gene3860;Name=YPD4_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19355
NC_017154.1	Protein Homology	CDS	4183375	4183542	.	+	0	ID=cds3785;Parent=gene3860;Dbxref=Genbank:WP_002217271.1;Name=WP_002217271.1;gbkey=CDS;product=invasin;protein_id=WP_002217271.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4183380	4184101	.	+	.	ID=id325;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4183532	4183990	.	+	.	ID=gene3861;Name=YPD4_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19360;old_locus_tag=YPD4_3296
NC_017154.1	Protein Homology	CDS	4183532	4183990	.	+	0	ID=cds3786;Parent=gene3861;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	4184117	4188337	.	-	.	ID=gene3862;Name=YPD4_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19365;old_locus_tag=YPD4_3297
NC_017154.1	Protein Homology	CDS	4184117	4188337	.	-	0	ID=cds3787;Parent=gene3862;Dbxref=Genbank:WP_002210677.1;Name=WP_002210677.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002210677.1;transl_table=11
NC_017154.1	RefSeq	gene	4188466	4192494	.	-	.	ID=gene3863;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=YPD4_RS19370;old_locus_tag=YPD4_3298
NC_017154.1	Protein Homology	CDS	4188466	4192494	.	-	0	ID=cds3788;Parent=gene3863;Dbxref=Genbank:WP_002210676.1;Name=WP_002210676.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_002210676.1;transl_table=11
NC_017154.1	RefSeq	gene	4192837	4193205	.	-	.	ID=gene3864;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=YPD4_RS19375;old_locus_tag=YPD4_3299
NC_017154.1	Protein Homology	CDS	4192837	4193205	.	-	0	ID=cds3789;Parent=gene3864;Dbxref=Genbank:WP_002210675.1;Name=WP_002210675.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11
NC_017154.1	RefSeq	gene	4193272	4193769	.	-	.	ID=gene3865;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=YPD4_RS19380;old_locus_tag=YPD4_3300
NC_017154.1	Protein Homology	CDS	4193272	4193769	.	-	0	ID=cds3790;Parent=gene3865;Dbxref=Genbank:WP_002210674.1;Name=WP_002210674.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_002210674.1;transl_table=11
NC_017154.1	RefSeq	gene	4194134	4194839	.	-	.	ID=gene3866;Name=YPD4_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19385;old_locus_tag=YPD4_3301
NC_017154.1	Protein Homology	CDS	4194134	4194839	.	-	0	ID=cds3791;Parent=gene3866;Dbxref=Genbank:WP_044023384.1;Name=WP_044023384.1;exception=annotated by transcript or proteomic data;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_044023384.1;transl_table=11
NC_017154.1	RefSeq	gene	4194843	4195271	.	-	.	ID=gene3867;Name=YPD4_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19390;old_locus_tag=YPD4_3302
NC_017154.1	Protein Homology	CDS	4194843	4195271	.	-	0	ID=cds3792;Parent=gene3867;Dbxref=Genbank:WP_002210672.1;Name=WP_002210672.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11
NC_017154.1	RefSeq	gene	4195462	4196007	.	-	.	ID=gene3868;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=YPD4_RS19395;old_locus_tag=YPD4_3303
NC_017154.1	Protein Homology	CDS	4195462	4196007	.	-	0	ID=cds3793;Parent=gene3868;Dbxref=Genbank:WP_015684034.1;Name=WP_015684034.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination protein NusG;protein_id=WP_015684034.1;transl_table=11
NC_017154.1	RefSeq	gene	4196009	4196393	.	-	.	ID=gene3869;Name=secE;gbkey=Gene;gene=secE;gene_biotype=pseudogene;locus_tag=YPD4_RS19400;pseudo=true
NC_017154.1	Protein Homology	CDS	4196009	4196393	.	-	0	ID=cds3794;Parent=gene3869;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4196644	4197828	.	-	.	ID=gene3870;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPD4_RS19405;old_locus_tag=YPD4_3304
NC_017154.1	Protein Homology	CDS	4196644	4197828	.	-	0	ID=cds3795;Parent=gene3870;Dbxref=Genbank:WP_002210669.1;Name=WP_002210669.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002210669.1;transl_table=11
NC_017154.1	RefSeq	gene	4197937	4198012	.	-	.	ID=gene3871;Name=YPD4_RS19410;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19410;old_locus_tag=YPD4_t56
NC_017154.1	tRNAscan-SE	tRNA	4197937	4198012	.	-	.	ID=rna69;Parent=gene3871;anticodon=(pos:complement(4197977..4197979));gbkey=tRNA;product=tRNA-Thr
NC_017154.1	tRNAscan-SE	exon	4197937	4198012	.	-	.	ID=id326;Parent=rna69;anticodon=(pos:complement(4197977..4197979));gbkey=tRNA;product=tRNA-Thr
NC_017154.1	RefSeq	gene	4198019	4198093	.	-	.	ID=gene3872;Name=YPD4_RS19415;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19415;old_locus_tag=YPD4_t57
NC_017154.1	tRNAscan-SE	tRNA	4198019	4198093	.	-	.	ID=rna70;Parent=gene3872;anticodon=(pos:complement(4198058..4198060));gbkey=tRNA;product=tRNA-Gly
NC_017154.1	tRNAscan-SE	exon	4198019	4198093	.	-	.	ID=id327;Parent=rna70;anticodon=(pos:complement(4198058..4198060));gbkey=tRNA;product=tRNA-Gly
NC_017154.1	RefSeq	gene	4198243	4198327	.	-	.	ID=gene3873;Name=YPD4_RS19420;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19420;old_locus_tag=YPD4_t58
NC_017154.1	tRNAscan-SE	tRNA	4198243	4198327	.	-	.	ID=rna71;Parent=gene3873;anticodon=(pos:complement(4198291..4198293));gbkey=tRNA;product=tRNA-Tyr
NC_017154.1	tRNAscan-SE	exon	4198243	4198327	.	-	.	ID=id328;Parent=rna71;anticodon=(pos:complement(4198291..4198293));gbkey=tRNA;product=tRNA-Tyr
NC_017154.1	RefSeq	gene	4198346	4198421	.	-	.	ID=gene3874;Name=YPD4_RS19425;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19425;old_locus_tag=YPD4_t59
NC_017154.1	tRNAscan-SE	tRNA	4198346	4198421	.	-	.	ID=rna72;Parent=gene3874;anticodon=(pos:complement(4198386..4198388));gbkey=tRNA;product=tRNA-Thr
NC_017154.1	tRNAscan-SE	exon	4198346	4198421	.	-	.	ID=id329;Parent=rna72;anticodon=(pos:complement(4198386..4198388));gbkey=tRNA;product=tRNA-Thr
NC_017154.1	RefSeq	repeat_region	4198815	4200775	.	+	.	ID=id330;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4198885	4199667	.	-	.	ID=gene3875;Name=YPD4_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19430;old_locus_tag=YPD4_3305
NC_017154.1	Protein Homology	CDS	4198885	4199667	.	-	0	ID=cds3796;Parent=gene3875;Dbxref=Genbank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;product=transposase;protein_id=WP_001317493.1;transl_table=11
NC_017154.1	RefSeq	gene	4199664	4200686	.	-	.	ID=gene3876;Name=YPD4_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19435;old_locus_tag=YPD4_3306
NC_017154.1	Protein Homology	CDS	4199664	4200686	.	-	0	ID=cds3797;Parent=gene3876;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	4200776	4201327	.	+	.	ID=gene3877;Name=YPD4_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19440;old_locus_tag=YPD4_3307
NC_017154.1	Protein Homology	CDS	4200776	4201327	.	+	0	ID=cds3798;Parent=gene3877;Dbxref=Genbank:WP_002217850.1;Name=WP_002217850.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002217850.1;transl_table=11
NC_017154.1	RefSeq	gene	4201538	4202488	.	+	.	ID=gene3878;Name=YPD4_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19445;old_locus_tag=YPD4_3308
NC_017154.1	Protein Homology	CDS	4201538	4202488	.	+	0	ID=cds3799;Parent=gene3878;Dbxref=Genbank:WP_002212290.1;Name=WP_002212290.1;gbkey=CDS;product=pantothenate kinase;protein_id=WP_002212290.1;transl_table=11
NC_017154.1	RefSeq	gene	4202523	4203482	.	-	.	ID=gene3879;Name=YPD4_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19450;old_locus_tag=YPD4_3309
NC_017154.1	Protein Homology	CDS	4202523	4203482	.	-	0	ID=cds3800;Parent=gene3879;Dbxref=Genbank:WP_002212289.1;Name=WP_002212289.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_002212289.1;transl_table=11
NC_017154.1	RefSeq	gene	4203479	4204516	.	-	.	ID=gene3880;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=YPD4_RS19455;old_locus_tag=YPD4_3310
NC_017154.1	Protein Homology	CDS	4203479	4204516	.	-	0	ID=cds3801;Parent=gene3880;Dbxref=Genbank:WP_002212288.1;Name=WP_002212288.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_002212288.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4204904	4210567	.	+	.	ID=id331;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4204980	4205095	.	-	.	ID=gene3881;Name=YPD4_RS19460;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS19460
NC_017154.1	cmsearch	rRNA	4204980	4205095	.	-	.	ID=rna73;Parent=gene3881;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	cmsearch	exon	4204980	4205095	.	-	.	ID=id332;Parent=rna73;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	RefSeq	gene	4205187	4208120	.	-	.	ID=gene3882;Name=YPD4_RS19465;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS19465;old_locus_tag=YPD4_r16
NC_017154.1	RefSeq	rRNA	4205187	4208120	.	-	.	ID=rna74;Parent=gene3882;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	exon	4205187	4208120	.	-	.	ID=id333;Parent=rna74;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	gene	4208364	4208439	.	-	.	ID=gene3883;Name=YPD4_RS19470;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19470;old_locus_tag=YPD4_t60
NC_017154.1	tRNAscan-SE	tRNA	4208364	4208439	.	-	.	ID=rna75;Parent=gene3883;anticodon=(pos:complement(4208403..4208405));gbkey=tRNA;product=tRNA-Glu
NC_017154.1	tRNAscan-SE	exon	4208364	4208439	.	-	.	ID=id334;Parent=rna75;anticodon=(pos:complement(4208403..4208405));gbkey=tRNA;product=tRNA-Glu
NC_017154.1	RefSeq	gene	4208573	4210121	.	-	.	ID=gene3884;Name=YPD4_RS19475;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS19475;old_locus_tag=YPD4_r17
NC_017154.1	RefSeq	rRNA	4208573	4210121	.	-	.	ID=rna76;Parent=gene3884;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	exon	4208573	4210121	.	-	.	ID=id335;Parent=rna76;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	gene	4210593	4211126	.	-	.	ID=gene3885;Name=YPD4_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19485
NC_017154.1	Protein Homology	CDS	4210593	4211126	.	-	0	ID=cds3802;Parent=gene3885;Dbxref=Genbank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=WP_002215920.1;transl_table=11
NC_017154.1	RefSeq	gene	4211148	4212599	.	-	.	ID=gene3886;Name=YPD4_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19490;old_locus_tag=YPD4_3311
NC_017154.1	Protein Homology	CDS	4211148	4212599	.	-	0	ID=cds3803;Parent=gene3886;Dbxref=Genbank:WP_002211550.1;Name=WP_002211550.1;gbkey=CDS;product=potassium transporter;protein_id=WP_002211550.1;transl_table=11
NC_017154.1	RefSeq	gene	4212639	4213115	.	-	.	ID=gene3887;Name=YPD4_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19495;old_locus_tag=YPD4_3312
NC_017154.1	Protein Homology	CDS	4212639	4213115	.	-	0	ID=cds3804;Parent=gene3887;Dbxref=Genbank:WP_002211549.1;Name=WP_002211549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211549.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4213077	4213800	.	+	.	ID=id336;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4213188	4213646	.	-	.	ID=gene3888;Name=YPD4_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19500;old_locus_tag=YPD4_3313
NC_017154.1	Protein Homology	CDS	4213188	4213646	.	-	0	ID=cds3805;Parent=gene3888;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	4213751	4213960	.	-	.	ID=gene3889;Name=YPD4_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19505
NC_017154.1	Protein Homology	CDS	4213751	4213960	.	-	0	ID=cds3806;Parent=gene3889;Dbxref=Genbank:WP_002211548.1;Name=WP_002211548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211548.1;transl_table=11
NC_017154.1	RefSeq	gene	4213960	4215291	.	-	.	ID=gene3890;Name=YPD4_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19510;old_locus_tag=YPD4_3314
NC_017154.1	Protein Homology	CDS	4213960	4215291	.	-	0	ID=cds3807;Parent=gene3890;Dbxref=Genbank:WP_002211547.1;Name=WP_002211547.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=WP_002211547.1;transl_table=11
NC_017154.1	RefSeq	gene	4215618	4217807	.	+	.	ID=gene3891;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=YPD4_RS19515;old_locus_tag=YPD4_3315
NC_017154.1	Protein Homology	CDS	4215618	4217807	.	+	0	ID=cds3808;Parent=gene3891;Dbxref=Genbank:WP_002211546.1;Name=WP_002211546.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=fatty acid oxidation complex subunit alpha;protein_id=WP_002211546.1;transl_table=11
NC_017154.1	RefSeq	gene	4217819	4218982	.	+	.	ID=gene3892;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=YPD4_RS19520;old_locus_tag=YPD4_3316
NC_017154.1	Protein Homology	CDS	4217819	4218982	.	+	0	ID=cds3809;Parent=gene3892;Dbxref=Genbank:WP_002211545.1;Name=WP_002211545.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=WP_002211545.1;transl_table=11
NC_017154.1	RefSeq	gene	4219142	4219843	.	-	.	ID=gene3893;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=YPD4_RS19525;old_locus_tag=YPD4_3317
NC_017154.1	Protein Homology	CDS	4219142	4219843	.	-	0	ID=cds3810;Parent=gene3893;Dbxref=Genbank:WP_002215918.1;Name=WP_002215918.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_002215918.1;transl_table=11
NC_017154.1	RefSeq	gene	4219898	4221394	.	-	.	ID=gene3894;Name=YPD4_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19530;old_locus_tag=YPD4_3318
NC_017154.1	Protein Homology	CDS	4219898	4221394	.	-	0	ID=cds3811;Parent=gene3894;Dbxref=Genbank:WP_002215917.1;Name=WP_002215917.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002215917.1;transl_table=11
NC_017154.1	RefSeq	gene	4221642	4222130	.	+	.	ID=gene3895;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=YPD4_RS19535;old_locus_tag=YPD4_3319
NC_017154.1	Protein Homology	CDS	4221642	4222130	.	+	0	ID=cds3812;Parent=gene3895;Dbxref=Genbank:WP_002211542.1;Name=WP_002211542.1;gbkey=CDS;gene=rfaH;product=transcriptional regulator;protein_id=WP_002211542.1;transl_table=11
NC_017154.1	RefSeq	gene	4222240	4223262	.	-	.	ID=gene3896;Name=YPD4_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19540;old_locus_tag=YPD4_3320
NC_017154.1	Protein Homology	CDS	4222240	4223262	.	-	0	ID=cds3813;Parent=gene3896;Dbxref=Genbank:WP_002211541.1;Name=WP_002211541.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_002211541.1;transl_table=11
NC_017154.1	RefSeq	gene	4223277	4223612	.	-	.	ID=gene3897;Name=YPD4_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19545;old_locus_tag=YPD4_3321
NC_017154.1	Protein Homology	CDS	4223277	4223612	.	-	0	ID=cds3814;Parent=gene3897;Dbxref=Genbank:WP_002211540.1;Name=WP_002211540.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211540.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4223583	4225540	.	+	.	ID=id337;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4223651	4224430	.	-	.	ID=gene3898;Name=YPD4_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19550;old_locus_tag=YPD4_3322
NC_017154.1	Protein Homology	CDS	4223651	4224430	.	-	0	ID=cds3815;Parent=gene3898;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	4224430	4225452	.	-	.	ID=gene3899;Name=YPD4_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19555;old_locus_tag=YPD4_3323
NC_017154.1	Protein Homology	CDS	4224430	4225452	.	-	0	ID=cds3816;Parent=gene3899;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	4225479	4226018	.	-	.	ID=gene3900;Name=YPD4_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19560;old_locus_tag=YPD4_3324
NC_017154.1	Protein Homology	CDS	4225479	4226018	.	-	0	ID=cds3817;Parent=gene3900;Dbxref=Genbank:WP_002211539.1;Name=WP_002211539.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211539.1;transl_table=11
NC_017154.1	RefSeq	gene	4226074	4226850	.	-	.	ID=gene3901;Name=YPD4_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19565;old_locus_tag=YPD4_3325
NC_017154.1	Protein Homology	CDS	4226074	4226850	.	-	0	ID=cds3818;Parent=gene3901;Dbxref=Genbank:WP_002211538.1;Name=WP_002211538.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_002211538.1;transl_table=11
NC_017154.1	RefSeq	gene	4226853	4227515	.	-	.	ID=gene3902;Name=YPD4_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19570;old_locus_tag=YPD4_3326
NC_017154.1	Protein Homology	CDS	4226853	4227515	.	-	0	ID=cds3819;Parent=gene3902;Dbxref=Genbank:WP_002211537.1;Name=WP_002211537.1;gbkey=CDS;product=Sec-independent protein translocase TatB;protein_id=WP_002211537.1;transl_table=11
NC_017154.1	RefSeq	gene	4227519	4227785	.	-	.	ID=gene3903;Name=YPD4_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19575
NC_017154.1	Protein Homology	CDS	4227519	4227785	.	-	0	ID=cds3820;Parent=gene3903;Dbxref=Genbank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;product=protein translocase TatA;protein_id=WP_002211536.1;transl_table=11
NC_017154.1	RefSeq	gene	4227966	4229597	.	-	.	ID=gene3904;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=YPD4_RS19580;old_locus_tag=YPD4_3327
NC_017154.1	Protein Homology	CDS	4227966	4229597	.	-	0	ID=cds3821;Parent=gene3904;Dbxref=Genbank:WP_002211535.1;Name=WP_002211535.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=hypothetical protein;protein_id=WP_002211535.1;transl_table=11
NC_017154.1	RefSeq	gene	4229597	4230247	.	-	.	ID=gene3905;Name=YPD4_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19585;old_locus_tag=YPD4_3328
NC_017154.1	Protein Homology	CDS	4229597	4230247	.	-	0	ID=cds3822;Parent=gene3905;Dbxref=Genbank:WP_002215928.1;Name=WP_002215928.1;gbkey=CDS;product=sterol-binding protein;protein_id=WP_002215928.1;transl_table=11
NC_017154.1	RefSeq	gene	4230261	4231016	.	-	.	ID=gene3906;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=YPD4_RS19590;old_locus_tag=YPD4_3329
NC_017154.1	Protein Homology	CDS	4230261	4231016	.	-	0	ID=cds3823;Parent=gene3906;Dbxref=Genbank:WP_002211533.1;Name=WP_002211533.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE;protein_id=WP_002211533.1;transl_table=11
NC_017154.1	RefSeq	gene	4231108	4232613	.	-	.	ID=gene3907;Name=YPD4_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19595;old_locus_tag=YPD4_3330
NC_017154.1	Protein Homology	CDS	4231108	4232613	.	-	0	ID=cds3824;Parent=gene3907;Dbxref=Genbank:WP_002211532.1;Name=WP_002211532.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_002211532.1;transl_table=11
NC_017154.1	RefSeq	gene	4232821	4233351	.	-	.	ID=gene3908;Name=YPD4_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19600;old_locus_tag=YPD4_3331
NC_017154.1	Protein Homology	CDS	4232821	4233351	.	-	0	ID=cds3825;Parent=gene3908;Dbxref=Genbank:WP_002211531.1;Name=WP_002211531.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002211531.1;transl_table=11
NC_017154.1	RefSeq	gene	4233623	4235434	.	-	.	ID=gene3909;Name=YPD4_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19605;old_locus_tag=YPD4_3332
NC_017154.1	Protein Homology	CDS	4233623	4235434	.	-	0	ID=cds3826;Parent=gene3909;Dbxref=Genbank:WP_002211530.1;Name=WP_002211530.1;gbkey=CDS;product=carbon starvation protein CstA;protein_id=WP_002211530.1;transl_table=11
NC_017154.1	RefSeq	gene	4235798	4236628	.	-	.	ID=gene3910;Name=YPD4_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19610;old_locus_tag=YPD4_3333
NC_017154.1	Protein Homology	CDS	4235798	4236628	.	-	0	ID=cds3827;Parent=gene3910;Dbxref=Genbank:WP_002228183.1;Name=WP_002228183.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002228183.1;transl_table=11
NC_017154.1	RefSeq	gene	4236749	4237510	.	-	.	ID=gene3911;Name=YPD4_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19615;old_locus_tag=YPD4_3334
NC_017154.1	Protein Homology	CDS	4236749	4237510	.	-	0	ID=cds3828;Parent=gene3911;Dbxref=Genbank:WP_002211528.1;Name=WP_002211528.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11
NC_017154.1	RefSeq	gene	4237938	4238810	.	+	.	ID=gene3912;Name=YPD4_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19620;old_locus_tag=YPD4_3335
NC_017154.1	Protein Homology	CDS	4237938	4238810	.	+	0	ID=cds3829;Parent=gene3912;Dbxref=Genbank:WP_002211527.1;Name=WP_002211527.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_002211527.1;transl_table=11
NC_017154.1	RefSeq	gene	4238865	4241156	.	-	.	ID=gene3913;Name=YPD4_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19625;old_locus_tag=YPD4_3336
NC_017154.1	Protein Homology	CDS	4238865	4241156	.	-	0	ID=cds3830;Parent=gene3913;Dbxref=Genbank:WP_002220853.1;Name=WP_002220853.1;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=WP_002220853.1;transl_table=11
NC_017154.1	RefSeq	gene	4241247	4242200	.	+	.	ID=gene3914;Name=YPD4_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19630;old_locus_tag=YPD4_3337
NC_017154.1	Protein Homology	CDS	4241247	4242200	.	+	0	ID=cds3831;Parent=gene3914;Dbxref=Genbank:WP_002211525.1;Name=WP_002211525.1;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211525.1;transl_table=11
NC_017154.1	RefSeq	gene	4242088	4242987	.	-	.	ID=gene3915;Name=YPD4_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19635
NC_017154.1	Protein Homology	CDS	4242088	4242987	.	-	0	ID=cds3832;Parent=gene3915;Dbxref=Genbank:WP_002215597.1;Name=WP_002215597.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215597.1;transl_table=11
NC_017154.1	RefSeq	gene	4243369	4244295	.	-	.	ID=gene3916;Name=YPD4_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19640;old_locus_tag=YPD4_3338
NC_017154.1	Protein Homology	CDS	4243369	4244295	.	-	0	ID=cds3833;Parent=gene3916;Dbxref=Genbank:WP_002215599.1;Name=WP_002215599.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215599.1;transl_table=11
NC_017154.1	RefSeq	gene	4244396	4245145	.	-	.	ID=gene3917;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=YPD4_RS19645;old_locus_tag=YPD4_3339
NC_017154.1	Protein Homology	CDS	4244396	4245145	.	-	0	ID=cds3834;Parent=gene3917;Dbxref=Genbank:WP_002211524.1;Name=WP_002211524.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211524.1;transl_table=11
NC_017154.1	RefSeq	gene	4245142	4246215	.	-	.	ID=gene3918;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=YPD4_RS19650;old_locus_tag=YPD4_3340
NC_017154.1	Protein Homology	CDS	4245142	4246215	.	-	0	ID=cds3835;Parent=gene3918;Dbxref=Genbank:WP_002211523.1;Name=WP_002211523.1;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_002211523.1;transl_table=11
NC_017154.1	RefSeq	gene	4246222	4247067	.	-	.	ID=gene3919;Name=YPD4_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19655;old_locus_tag=YPD4_3341
NC_017154.1	Protein Homology	CDS	4246222	4247067	.	-	0	ID=cds3836;Parent=gene3919;Dbxref=Genbank:WP_002211522.1;Name=WP_002211522.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211522.1;transl_table=11
NC_017154.1	RefSeq	gene	4247064	4247951	.	-	.	ID=gene3920;Name=YPD4_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19660;old_locus_tag=YPD4_3342
NC_017154.1	Protein Homology	CDS	4247064	4247951	.	-	0	ID=cds3837;Parent=gene3920;Dbxref=Genbank:WP_002211521.1;Name=WP_002211521.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211521.1;transl_table=11
NC_017154.1	RefSeq	gene	4248249	4249568	.	-	.	ID=gene3921;Name=YPD4_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19665;old_locus_tag=YPD4_3343
NC_017154.1	Protein Homology	CDS	4248249	4249568	.	-	0	ID=cds3838;Parent=gene3921;Dbxref=Genbank:WP_002211520.1;Name=WP_002211520.1;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol-3-phosphate-binding periplasmic protein UgpB;protein_id=WP_002211520.1;transl_table=11
NC_017154.1	RefSeq	gene	4250123	4250614	.	+	.	ID=gene3922;Name=YPD4_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19670;old_locus_tag=YPD4_3344
NC_017154.1	Protein Homology	CDS	4250123	4250614	.	+	0	ID=cds3839;Parent=gene3922;Dbxref=Genbank:WP_002228181.1;Name=WP_002228181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228181.1;transl_table=11
NC_017154.1	RefSeq	gene	4250881	4253214	.	+	.	ID=gene3923;Name=YPD4_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19675;old_locus_tag=YPD4_3345
NC_017154.1	Protein Homology	CDS	4250881	4253214	.	+	0	ID=cds3840;Parent=gene3923;Dbxref=Genbank:WP_002211518.1;Name=WP_002211518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211518.1;transl_table=11
NC_017154.1	RefSeq	gene	4253232	4253918	.	+	.	ID=gene3924;Name=YPD4_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19680;old_locus_tag=YPD4_3346
NC_017154.1	Protein Homology	CDS	4253232	4253918	.	+	0	ID=cds3841;Parent=gene3924;Dbxref=Genbank:WP_002211517.1;Name=WP_002211517.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211517.1;transl_table=11
NC_017154.1	RefSeq	gene	4253890	4254537	.	+	.	ID=gene3925;Name=YPD4_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19685;old_locus_tag=YPD4_3347
NC_017154.1	Protein Homology	CDS	4253890	4254537	.	+	0	ID=cds3842;Parent=gene3925;Dbxref=Genbank:WP_002211516.1;Name=WP_002211516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211516.1;transl_table=11
NC_017154.1	RefSeq	gene	4254599	4255117	.	+	.	ID=gene3926;Name=YPD4_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19690;old_locus_tag=YPD4_3348
NC_017154.1	Protein Homology	CDS	4254599	4255117	.	+	0	ID=cds3843;Parent=gene3926;Dbxref=Genbank:WP_002211515.1;Name=WP_002211515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211515.1;transl_table=11
NC_017154.1	RefSeq	gene	4255223	4256329	.	+	.	ID=gene3927;Name=YPD4_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19695;old_locus_tag=YPD4_3349
NC_017154.1	Protein Homology	CDS	4255223	4256329	.	+	0	ID=cds3844;Parent=gene3927;Dbxref=Genbank:WP_002211514.1;Name=WP_002211514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211514.1;transl_table=11
NC_017154.1	RefSeq	gene	4256444	4256905	.	-	.	ID=gene3928;Name=YPD4_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19700;old_locus_tag=YPD4_3350
NC_017154.1	Protein Homology	CDS	4256444	4256905	.	-	0	ID=cds3845;Parent=gene3928;Dbxref=Genbank:WP_002211513.1;Name=WP_002211513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211513.1;transl_table=11
NC_017154.1	RefSeq	gene	4257133	4257834	.	-	.	ID=gene3929;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=YPD4_RS19705;old_locus_tag=YPD4_3351
NC_017154.1	Protein Homology	CDS	4257133	4257834	.	-	0	ID=cds3846;Parent=gene3929;Dbxref=Genbank:WP_002211512.1;Name=WP_002211512.1;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livF;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211512.1;transl_table=11
NC_017154.1	RefSeq	gene	4257879	4258646	.	-	.	ID=gene3930;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=YPD4_RS19710;old_locus_tag=YPD4_3352
NC_017154.1	Protein Homology	CDS	4257879	4258646	.	-	0	ID=cds3847;Parent=gene3930;Dbxref=Genbank:WP_002211511.1;Name=WP_002211511.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211511.1;transl_table=11
NC_017154.1	RefSeq	gene	4258643	4259929	.	-	.	ID=gene3931;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=YPD4_RS19715;old_locus_tag=YPD4_3353
NC_017154.1	Protein Homology	CDS	4258643	4259929	.	-	0	ID=cds3848;Parent=gene3931;Dbxref=Genbank:WP_002211510.1;Name=WP_002211510.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=leucine/isoleucine/valine transporter permease subunit;protein_id=WP_002211510.1;transl_table=11
NC_017154.1	RefSeq	gene	4259926	4260852	.	-	.	ID=gene3932;Name=YPD4_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19720;old_locus_tag=YPD4_3354
NC_017154.1	Protein Homology	CDS	4259926	4260852	.	-	0	ID=cds3849;Parent=gene3932;Dbxref=Genbank:WP_002211509.1;Name=WP_002211509.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=WP_002211509.1;transl_table=11
NC_017154.1	RefSeq	gene	4261033	4262148	.	-	.	ID=gene3933;Name=YPD4_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19725;old_locus_tag=YPD4_3355
NC_017154.1	Protein Homology	CDS	4261033	4262148	.	-	0	ID=cds3850;Parent=gene3933;Dbxref=Genbank:WP_002211508.1;Name=WP_002211508.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002211508.1;transl_table=11
NC_017154.1	RefSeq	gene	4262570	4262962	.	+	.	ID=gene3934;Name=YPD4_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19730;old_locus_tag=YPD4_3356
NC_017154.1	Protein Homology	CDS	4262570	4262962	.	+	0	ID=cds3851;Parent=gene3934;Dbxref=Genbank:WP_002211507.1;Name=WP_002211507.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002211507.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4263096	4263817	.	+	.	ID=id338;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4263208	4263666	.	-	.	ID=gene3935;Name=YPD4_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19735;old_locus_tag=YPD4_3357
NC_017154.1	Protein Homology	CDS	4263208	4263666	.	-	0	ID=cds3852;Parent=gene3935;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11
NC_017154.1	RefSeq	gene	4263656	4263826	.	-	.	ID=gene3936;Name=YPD4_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19740
NC_017154.1	Protein Homology	CDS	4263656	4263826	.	-	0	ID=cds3853;Parent=gene3936;Dbxref=Genbank:WP_029787950.1;Name=WP_029787950.1;gbkey=CDS;product=transposase;protein_id=WP_029787950.1;transl_table=11
NC_017154.1	RefSeq	gene	4263880	4264737	.	-	.	ID=gene3937;Name=YPD4_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19745;old_locus_tag=YPD4_3358
NC_017154.1	Protein Homology	CDS	4263880	4264737	.	-	0	ID=cds3854;Parent=gene3937;Dbxref=Genbank:WP_002211506.1;Name=WP_002211506.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_002211506.1;transl_table=11
NC_017154.1	RefSeq	gene	4265048	4266001	.	-	.	ID=gene3938;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=YPD4_RS19750;old_locus_tag=YPD4_3359
NC_017154.1	Protein Homology	CDS	4265048	4266001	.	-	0	ID=cds3855;Parent=gene3938;Dbxref=Genbank:WP_002211505.1;Name=WP_002211505.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_002211505.1;transl_table=11
NC_017154.1	RefSeq	gene	4265991	4266659	.	-	.	ID=gene3939;Name=YPD4_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19755;old_locus_tag=YPD4_3360
NC_017154.1	Protein Homology	CDS	4265991	4266659	.	-	0	ID=cds3856;Parent=gene3939;Dbxref=Genbank:WP_002211504.1;Name=WP_002211504.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division protein FtsE;protein_id=WP_002211504.1;transl_table=11
NC_017154.1	RefSeq	gene	4266665	4268299	.	-	.	ID=gene3940;Name=YPD4_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19760;old_locus_tag=YPD4_3361
NC_017154.1	Protein Homology	CDS	4266665	4268299	.	-	0	ID=cds3857;Parent=gene3940;Dbxref=Genbank:WP_002371117.1;Name=WP_002371117.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_002371117.1;transl_table=11
NC_017154.1	RefSeq	gene	4268328	4268471	.	+	.	ID=gene3941;Name=YPD4_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19765
NC_017154.1	Protein Homology	CDS	4268328	4268471	.	+	0	ID=cds3858;Parent=gene3941;Dbxref=Genbank:WP_002215975.1;Name=WP_002215975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215975.1;transl_table=11
NC_017154.1	RefSeq	gene	4268581	4269243	.	+	.	ID=gene3942;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=YPD4_RS19770
NC_017154.1	Protein Homology	CDS	4268581	4269243	.	+	0	ID=cds3859;Parent=gene3942;Dbxref=Genbank:WP_002211502.1;Name=WP_002211502.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA methyltransferase;protein_id=WP_002211502.1;transl_table=11
NC_017154.1	RefSeq	gene	4269233	4269505	.	+	.	ID=gene3943;Name=YPD4_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19775
NC_017154.1	Protein Homology	CDS	4269233	4269505	.	+	0	ID=cds3860;Parent=gene3943;Dbxref=Genbank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211501.1;transl_table=11
NC_017154.1	RefSeq	gene	4269692	4270111	.	-	.	ID=gene3944;Name=YPD4_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19780;old_locus_tag=YPD4_3363
NC_017154.1	Protein Homology	CDS	4269692	4270111	.	-	0	ID=cds3861;Parent=gene3944;Dbxref=Genbank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211500.1;transl_table=11
NC_017154.1	RefSeq	gene	4270323	4270643	.	-	.	ID=gene3945;Name=YPD4_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19785;old_locus_tag=YPD4_3364
NC_017154.1	Protein Homology	CDS	4270323	4270643	.	-	0	ID=cds3862;Parent=gene3945;Dbxref=Genbank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211499.1;transl_table=11
NC_017154.1	RefSeq	gene	4270933	4271559	.	+	.	ID=gene3946;Name=YPD4_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19790;old_locus_tag=YPD4_3365
NC_017154.1	Protein Homology	CDS	4270933	4271559	.	+	0	ID=cds3863;Parent=gene3946;Dbxref=Genbank:WP_002211498.1;Name=WP_002211498.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211498.1;transl_table=11
NC_017154.1	RefSeq	gene	4271973	4274339	.	+	.	ID=gene3947;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=YPD4_RS19795;old_locus_tag=YPD4_3366
NC_017154.1	Protein Homology	CDS	4271973	4274339	.	+	0	ID=cds3864;Parent=gene3947;Dbxref=Genbank:WP_002211497.1;Name=WP_002211497.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;product=cadmium-transporting ATPase;protein_id=WP_002211497.1;transl_table=11
NC_017154.1	RefSeq	gene	4274439	4274693	.	-	.	ID=gene3948;Name=YPD4_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19800
NC_017154.1	Protein Homology	CDS	4274439	4274693	.	-	0	ID=cds3865;Parent=gene3948;Dbxref=Genbank:WP_002215973.1;Name=WP_002215973.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11
NC_017154.1	RefSeq	gene	4274977	4275645	.	+	.	ID=gene3949;Name=YPD4_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19805;old_locus_tag=YPD4_3368
NC_017154.1	Protein Homology	CDS	4274977	4275645	.	+	0	ID=cds3866;Parent=gene3949;Dbxref=Genbank:WP_002211495.1;Name=WP_002211495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211495.1;transl_table=11
NC_017154.1	RefSeq	gene	4275775	4276302	.	+	.	ID=gene3950;Name=YPD4_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19810;old_locus_tag=YPD4_3369
NC_017154.1	Protein Homology	CDS	4275775	4276302	.	+	0	ID=cds3867;Parent=gene3950;Dbxref=Genbank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211494.1;transl_table=11
NC_017154.1	RefSeq	gene	4276464	4277759	.	-	.	ID=gene3951;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=YPD4_RS19815;old_locus_tag=YPD4_3370
NC_017154.1	Protein Homology	CDS	4276464	4277759	.	-	0	ID=cds3868;Parent=gene3951;Dbxref=Genbank:WP_002211493.1;Name=WP_002211493.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_002211493.1;transl_table=11
NC_017154.1	RefSeq	gene	4277756	4279030	.	-	.	ID=gene3952;Name=YPD4_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19820;old_locus_tag=YPD4_3371
NC_017154.1	Protein Homology	CDS	4277756	4279030	.	-	0	ID=cds3869;Parent=gene3952;Dbxref=Genbank:WP_002211492.1;Name=WP_002211492.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=WP_002211492.1;transl_table=11
NC_017154.1	RefSeq	gene	4279020	4280675	.	-	.	ID=gene3953;Name=YPD4_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19825;old_locus_tag=YPD4_3372
NC_017154.1	Protein Homology	CDS	4279020	4280675	.	-	0	ID=cds3870;Parent=gene3953;Dbxref=Genbank:WP_002211491.1;Name=WP_002211491.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002211491.1;transl_table=11
NC_017154.1	RefSeq	gene	4280849	4280947	.	-	.	ID=gene3954;Name=YPD4_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19830
NC_017154.1	Protein Homology	CDS	4280849	4280947	.	-	0	ID=cds3871;Parent=gene3954;Dbxref=Genbank:WP_002216569.1;Name=WP_002216569.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002216569.1;transl_table=11
NC_017154.1	RefSeq	gene	4281300	4282415	.	+	.	ID=gene3955;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=YPD4_RS19835;old_locus_tag=YPD4_3373
NC_017154.1	Protein Homology	CDS	4281300	4282415	.	+	0	ID=cds3872;Parent=gene3955;Dbxref=Genbank:WP_002211490.1;Name=WP_002211490.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211490.1;transl_table=11
NC_017154.1	RefSeq	gene	4282489	4283688	.	-	.	ID=gene3956;Name=YPD4_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19840;old_locus_tag=YPD4_3374
NC_017154.1	Protein Homology	CDS	4282489	4283688	.	-	0	ID=cds3873;Parent=gene3956;Dbxref=Genbank:WP_002366764.1;Name=WP_002366764.1;gbkey=CDS;product=viral enhancin family protein;protein_id=WP_002366764.1;transl_table=11
NC_017154.1	RefSeq	gene	4283965	4284774	.	-	.	ID=gene3957;Name=YPD4_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19845;old_locus_tag=YPD4_3375
NC_017154.1	Protein Homology	CDS	4283965	4284774	.	-	0	ID=cds3874;Parent=gene3957;Dbxref=Genbank:WP_002211488.1;Name=WP_002211488.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211488.1;transl_table=11
NC_017154.1	RefSeq	gene	4284809	4285822	.	-	.	ID=gene3958;Name=YPD4_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19850;old_locus_tag=YPD4_3376
NC_017154.1	Protein Homology	CDS	4284809	4285822	.	-	0	ID=cds3875;Parent=gene3958;Dbxref=Genbank:WP_002211487.1;Name=WP_002211487.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;product=lysophospholipase L2;protein_id=WP_002211487.1;transl_table=11
NC_017154.1	RefSeq	gene	4286018	4286637	.	+	.	ID=gene3959;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=pseudogene;locus_tag=YPD4_RS19855;pseudo=true
NC_017154.1	Protein Homology	CDS	4286018	4286637	.	+	0	ID=cds3876;Parent=gene3959;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=rhtB;product=homoserine transporter;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4286688	4287308	.	-	.	ID=gene3960;Name=YPD4_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19860;old_locus_tag=YPD4_3378
NC_017154.1	Protein Homology	CDS	4286688	4287308	.	-	0	ID=cds3877;Parent=gene3960;Dbxref=Genbank:WP_002211485.1;Name=WP_002211485.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002211485.1;transl_table=11
NC_017154.1	RefSeq	gene	4287415	4289247	.	-	.	ID=gene3961;Name=YPD4_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19865;old_locus_tag=YPD4_3379
NC_017154.1	Protein Homology	CDS	4287415	4289247	.	-	0	ID=cds3878;Parent=gene3961;Dbxref=Genbank:WP_002211484.1;Name=WP_002211484.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11
NC_017154.1	RefSeq	gene	4289325	4290203	.	-	.	ID=gene3962;Name=YPD4_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19870;old_locus_tag=YPD4_3380
NC_017154.1	Protein Homology	CDS	4289325	4290203	.	-	0	ID=cds3879;Parent=gene3962;Dbxref=Genbank:WP_002211483.1;Name=WP_002211483.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;product=phospholipase A;protein_id=WP_002211483.1;transl_table=11
NC_017154.1	RefSeq	gene	4290425	4290895	.	+	.	ID=gene3963;Name=YPD4_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19875;old_locus_tag=YPD4_3381
NC_017154.1	Protein Homology	CDS	4290425	4290895	.	+	0	ID=cds3880;Parent=gene3963;Dbxref=Genbank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211482.1;transl_table=11
NC_017154.1	RefSeq	gene	4290982	4291873	.	+	.	ID=gene3964;Name=YPD4_RS19880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS19880;old_locus_tag=YPD4_3382;pseudo=true
NC_017154.1	Protein Homology	CDS	4290982	4291873	.	+	0	ID=cds3881;Parent=gene3964;exception=annotated by transcript or proteomic data;gbkey=CDS;product=chloramphenical resistance permease RarD;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4291971	4292921	.	-	.	ID=gene3965;Name=YPD4_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19885;old_locus_tag=YPD4_3383
NC_017154.1	Protein Homology	CDS	4291971	4292921	.	-	0	ID=cds3882;Parent=gene3965;Dbxref=Genbank:WP_002211480.1;Name=WP_002211480.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_002211480.1;transl_table=11
NC_017154.1	RefSeq	gene	4293570	4294400	.	-	.	ID=gene3966;Name=YPD4_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19890;old_locus_tag=YPD4_3384
NC_017154.1	Protein Homology	CDS	4293570	4294400	.	-	0	ID=cds3883;Parent=gene3966;Dbxref=Genbank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211478.1;transl_table=11
NC_017154.1	RefSeq	gene	4294426	4295644	.	-	.	ID=gene3967;Name=YPD4_RS19895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS19895;pseudo=true
NC_017154.1	Protein Homology	CDS	4294426	4295644	.	-	0	ID=cds3884;Parent=gene3967;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4296072	4296758	.	+	.	ID=gene3968;Name=YPD4_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19900;old_locus_tag=YPD4_3387
NC_017154.1	Protein Homology	CDS	4296072	4296758	.	+	0	ID=cds3885;Parent=gene3968;Dbxref=Genbank:WP_002211476.1;Name=WP_002211476.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002211476.1;transl_table=11
NC_017154.1	RefSeq	gene	4296872	4299034	.	-	.	ID=gene3969;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=YPD4_RS19905;old_locus_tag=YPD4_3388
NC_017154.1	Protein Homology	CDS	4296872	4299034	.	-	0	ID=cds3886;Parent=gene3969;Dbxref=Genbank:WP_002211475.1;Name=WP_002211475.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase;protein_id=WP_002211475.1;transl_table=11
NC_017154.1	RefSeq	gene	4299136	4299852	.	-	.	ID=gene3970;Name=YPD4_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19910;old_locus_tag=YPD4_3389
NC_017154.1	Protein Homology	CDS	4299136	4299852	.	-	0	ID=cds3887;Parent=gene3970;Dbxref=Genbank:WP_002211474.1;Name=WP_002211474.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_002211474.1;transl_table=11
NC_017154.1	RefSeq	gene	4299852	4300763	.	-	.	ID=gene3971;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=YPD4_RS19915;old_locus_tag=YPD4_3390
NC_017154.1	Protein Homology	CDS	4299852	4300763	.	-	0	ID=cds3888;Parent=gene3971;Dbxref=Genbank:WP_002211473.1;Name=WP_002211473.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=WP_002211473.1;transl_table=11
NC_017154.1	RefSeq	gene	4300760	4301464	.	-	.	ID=gene3972;Name=YPD4_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19920;old_locus_tag=YPD4_3391
NC_017154.1	Protein Homology	CDS	4300760	4301464	.	-	0	ID=cds3889;Parent=gene3972;Dbxref=Genbank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211472.1;transl_table=11
NC_017154.1	RefSeq	gene	4301529	4302353	.	-	.	ID=gene3973;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=YPD4_RS19925;old_locus_tag=YPD4_3392
NC_017154.1	Protein Homology	CDS	4301529	4302353	.	-	0	ID=cds3890;Parent=gene3973;Dbxref=Genbank:WP_002211471.1;Name=WP_002211471.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11
NC_017154.1	RefSeq	gene	4302537	4302725	.	-	.	ID=gene3974;Name=YPD4_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19930
NC_017154.1	Protein Homology	CDS	4302537	4302725	.	-	0	ID=cds3891;Parent=gene3974;Dbxref=Genbank:WP_002211470.1;Name=WP_002211470.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211470.1;transl_table=11
NC_017154.1	RefSeq	gene	4302877	4303197	.	+	.	ID=gene3975;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=YPD4_RS19935;old_locus_tag=YPD4_3393
NC_017154.1	Protein Homology	CDS	4302877	4303197	.	+	0	ID=cds3892;Parent=gene3975;Dbxref=Genbank:WP_002211469.1;Name=WP_002211469.1;Note=iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=protein CyaY;protein_id=WP_002211469.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4303232	4303404	.	+	.	ID=id339;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4303441	4305993	.	-	.	ID=gene3976;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=YPD4_RS19940;old_locus_tag=YPD4_3394
NC_017154.1	Protein Homology	CDS	4303441	4305993	.	-	0	ID=cds3893;Parent=gene3976;Dbxref=Genbank:WP_002211468.1;Name=WP_002211468.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_002211468.1;transl_table=11
NC_017154.1	RefSeq	gene	4306066	4306266	.	+	.	ID=gene3977;Name=YPD4_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19945
NC_017154.1	Protein Homology	CDS	4306066	4306266	.	+	0	ID=cds3894;Parent=gene3977;Dbxref=Genbank:WP_002211467.1;Name=WP_002211467.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211467.1;transl_table=11
NC_017154.1	RefSeq	gene	4306487	4307428	.	+	.	ID=gene3978;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=YPD4_RS19950;old_locus_tag=YPD4_3395
NC_017154.1	Protein Homology	CDS	4306487	4307428	.	+	0	ID=cds3895;Parent=gene3978;Dbxref=Genbank:WP_002211465.1;Name=WP_002211465.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_002211465.1;transl_table=11
NC_017154.1	RefSeq	gene	4307425	4308174	.	+	.	ID=gene3979;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=YPD4_RS19955;old_locus_tag=YPD4_3396
NC_017154.1	Protein Homology	CDS	4307425	4308174	.	+	0	ID=cds3896;Parent=gene3979;Dbxref=Genbank:WP_002211464.1;Name=WP_002211464.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211464.1;transl_table=11
NC_017154.1	RefSeq	gene	4308205	4309329	.	+	.	ID=gene3980;Name=YPD4_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19960;old_locus_tag=YPD4_3397
NC_017154.1	Protein Homology	CDS	4308205	4309329	.	+	0	ID=cds3897;Parent=gene3980;Dbxref=Genbank:WP_002211463.1;Name=WP_002211463.1;gbkey=CDS;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211463.1;transl_table=11
NC_017154.1	RefSeq	gene	4309332	4310552	.	+	.	ID=gene3981;Name=YPD4_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19965;old_locus_tag=YPD4_3398
NC_017154.1	Protein Homology	CDS	4309332	4310552	.	+	0	ID=cds3898;Parent=gene3981;Dbxref=Genbank:WP_002211462.1;Name=WP_002211462.1;gbkey=CDS;product=protoheme IX biogenesis protein;protein_id=WP_002211462.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4310633	4311354	.	+	.	ID=id340;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4310745	4311203	.	-	.	ID=gene3982;Name=YPD4_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19970;old_locus_tag=YPD4_3399
NC_017154.1	Protein Homology	CDS	4310745	4311203	.	-	0	ID=cds3899;Parent=gene3982;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	4312071	4312147	.	-	.	ID=gene3983;Name=YPD4_RS19975;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19975;old_locus_tag=YPD4_t61
NC_017154.1	tRNAscan-SE	tRNA	4312071	4312147	.	-	.	ID=rna77;Parent=gene3983;anticodon=(pos:complement(4312111..4312113));gbkey=tRNA;product=tRNA-Pro
NC_017154.1	tRNAscan-SE	exon	4312071	4312147	.	-	.	ID=id341;Parent=rna77;anticodon=(pos:complement(4312111..4312113));gbkey=tRNA;product=tRNA-Pro
NC_017154.1	RefSeq	gene	4312223	4312309	.	-	.	ID=gene3984;Name=YPD4_RS19980;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19980;old_locus_tag=YPD4_t62
NC_017154.1	tRNAscan-SE	tRNA	4312223	4312309	.	-	.	ID=rna78;Parent=gene3984;anticodon=(pos:complement(4312273..4312275));gbkey=tRNA;product=tRNA-Leu
NC_017154.1	tRNAscan-SE	exon	4312223	4312309	.	-	.	ID=id342;Parent=rna78;anticodon=(pos:complement(4312273..4312275));gbkey=tRNA;product=tRNA-Leu
NC_017154.1	RefSeq	gene	4312326	4312401	.	-	.	ID=gene3985;Name=YPD4_RS19985;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19985;old_locus_tag=YPD4_t63
NC_017154.1	tRNAscan-SE	tRNA	4312326	4312401	.	-	.	ID=rna79;Parent=gene3985;anticodon=(pos:complement(4312366..4312368));gbkey=tRNA;product=tRNA-His
NC_017154.1	tRNAscan-SE	exon	4312326	4312401	.	-	.	ID=id343;Parent=rna79;anticodon=(pos:complement(4312366..4312368));gbkey=tRNA;product=tRNA-His
NC_017154.1	RefSeq	gene	4312485	4312561	.	-	.	ID=gene3986;Name=YPD4_RS19990;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS19990;old_locus_tag=YPD4_t64
NC_017154.1	tRNAscan-SE	tRNA	4312485	4312561	.	-	.	ID=rna80;Parent=gene3986;anticodon=(pos:complement(4312525..4312527));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	tRNAscan-SE	exon	4312485	4312561	.	-	.	ID=id344;Parent=rna80;anticodon=(pos:complement(4312525..4312527));gbkey=tRNA;product=tRNA-Arg
NC_017154.1	RefSeq	gene	4312710	4314101	.	-	.	ID=gene3987;Name=YPD4_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS19995;old_locus_tag=YPD4_3400
NC_017154.1	Protein Homology	CDS	4312710	4314101	.	-	0	ID=cds3900;Parent=gene3987;Dbxref=Genbank:WP_002220976.1;Name=WP_002220976.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220976.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4314226	4314351	.	+	.	ID=id345;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4314625	4315365	.	-	.	ID=gene3988;Name=YPD4_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20000;old_locus_tag=YPD4_3401
NC_017154.1	Protein Homology	CDS	4314625	4315365	.	-	0	ID=cds3901;Parent=gene3988;Dbxref=Genbank:WP_002211977.1;Name=WP_002211977.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_002211977.1;transl_table=11
NC_017154.1	RefSeq	gene	4315374	4316738	.	-	.	ID=gene3989;Name=YPD4_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20005;old_locus_tag=YPD4_3402
NC_017154.1	Protein Homology	CDS	4315374	4316738	.	-	0	ID=cds3902;Parent=gene3989;Dbxref=Genbank:WP_015684039.1;Name=WP_015684039.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=polymerase;protein_id=WP_015684039.1;transl_table=11
NC_017154.1	RefSeq	gene	4316735	4317820	.	-	.	ID=gene3990;Name=YPD4_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20010;old_locus_tag=YPD4_3403
NC_017154.1	Protein Homology	CDS	4316735	4317820	.	-	0	ID=cds3903;Parent=gene3990;Dbxref=Genbank:WP_002211979.1;Name=WP_002211979.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;product=TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase;protein_id=WP_002211979.1;transl_table=11
NC_017154.1	RefSeq	gene	4317843	4319099	.	-	.	ID=gene3991;Name=YPD4_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20015;old_locus_tag=YPD4_3404
NC_017154.1	Protein Homology	CDS	4317843	4319099	.	-	0	ID=cds3904;Parent=gene3991;Dbxref=Genbank:WP_002211980.1;Name=WP_002211980.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=translocase;protein_id=WP_002211980.1;transl_table=11
NC_017154.1	RefSeq	gene	4319101	4320231	.	-	.	ID=gene3992;Name=YPD4_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20020;old_locus_tag=YPD4_3405
NC_017154.1	Protein Homology	CDS	4319101	4320231	.	-	0	ID=cds3905;Parent=gene3992;Dbxref=Genbank:WP_002211981.1;Name=WP_002211981.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose aminotransferase;protein_id=WP_002211981.1;transl_table=11
NC_017154.1	RefSeq	gene	4320233	4320970	.	-	.	ID=gene3993;Name=YPD4_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20025;old_locus_tag=YPD4_3406
NC_017154.1	Protein Homology	CDS	4320233	4320970	.	-	0	ID=cds3906;Parent=gene3993;Dbxref=Genbank:WP_002211982.1;Name=WP_002211982.1;gbkey=CDS;product=TDP-fucosamine acetyltransferase;protein_id=WP_002211982.1;transl_table=11
NC_017154.1	RefSeq	gene	4320948	4321829	.	-	.	ID=gene3994;Name=YPD4_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20030;old_locus_tag=YPD4_3407
NC_017154.1	Protein Homology	CDS	4320948	4321829	.	-	0	ID=cds3907;Parent=gene3994;Dbxref=Genbank:WP_002211983.1;Name=WP_002211983.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_002211983.1;transl_table=11
NC_017154.1	RefSeq	gene	4322124	4323191	.	-	.	ID=gene3995;Name=YPD4_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20035;old_locus_tag=YPD4_3408
NC_017154.1	Protein Homology	CDS	4322124	4323191	.	-	0	ID=cds3908;Parent=gene3995;Dbxref=Genbank:WP_002211984.1;Name=WP_002211984.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_002211984.1;transl_table=11
NC_017154.1	RefSeq	gene	4323188	4324450	.	-	.	ID=gene3996;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=YPD4_RS20040;old_locus_tag=YPD4_3409
NC_017154.1	Protein Homology	CDS	4323188	4324450	.	-	0	ID=cds3909;Parent=gene3996;Dbxref=Genbank:WP_002211985.1;Name=WP_002211985.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_002211985.1;transl_table=11
NC_017154.1	RefSeq	gene	4324447	4325577	.	-	.	ID=gene3997;Name=YPD4_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20045;old_locus_tag=YPD4_3410
NC_017154.1	Protein Homology	CDS	4324447	4325577	.	-	0	ID=cds3910;Parent=gene3997;Dbxref=Genbank:WP_002211986.1;Name=WP_002211986.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_002211986.1;transl_table=11
NC_017154.1	RefSeq	gene	4325858	4326934	.	-	.	ID=gene3998;Name=YPD4_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20050;old_locus_tag=YPD4_3411
NC_017154.1	Protein Homology	CDS	4325858	4326934	.	-	0	ID=cds3911;Parent=gene3998;Dbxref=Genbank:WP_002226022.1;Name=WP_002226022.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002226022.1;transl_table=11
NC_017154.1	RefSeq	gene	4326955	4328037	.	-	.	ID=gene3999;Name=YPD4_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20055;old_locus_tag=YPD4_3412
NC_017154.1	Protein Homology	CDS	4326955	4328037	.	-	0	ID=cds3912;Parent=gene3999;Dbxref=Genbank:WP_002216793.1;Name=WP_002216793.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_002216793.1;transl_table=11
NC_017154.1	RefSeq	gene	4328587	4329846	.	-	.	ID=gene4000;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=YPD4_RS20060;old_locus_tag=YPD4_3413
NC_017154.1	Protein Homology	CDS	4328587	4329846	.	-	0	ID=cds3913;Parent=gene4000;Dbxref=Genbank:WP_002211989.1;Name=WP_002211989.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11
NC_017154.1	RefSeq	gene	4330326	4330652	.	-	.	ID=gene4001;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=YPD4_RS20065;old_locus_tag=YPD4_3414
NC_017154.1	Protein Homology	CDS	4330326	4330652	.	-	0	ID=cds3914;Parent=gene4001;Dbxref=Genbank:WP_002211990.1;Name=WP_002211990.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_002211990.1;transl_table=11
NC_017154.1	RefSeq	gene	4330771	4332057	.	+	.	ID=gene4002;Name=YPD4_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20070;old_locus_tag=YPD4_3415
NC_017154.1	Protein Homology	CDS	4330771	4332057	.	+	0	ID=cds3915;Parent=gene4002;Dbxref=Genbank:WP_002228177.1;Name=WP_002228177.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=WP_002228177.1;transl_table=11
NC_017154.1	RefSeq	gene	4332249	4332566	.	+	.	ID=gene4003;Name=YPD4_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20075
NC_017154.1	Protein Homology	CDS	4332249	4332566	.	+	0	ID=cds3916;Parent=gene4003;Dbxref=Genbank:WP_002229742.1;Name=WP_002229742.1;gbkey=CDS;product=guanosine-5'-triphosphate%2C3'-diphosphatepyrophosphatase;protein_id=WP_002229742.1;transl_table=11
NC_017154.1	RefSeq	gene	4332545	4333555	.	+	.	ID=gene4004;Name=YPD4_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20080;old_locus_tag=YPD4_3416
NC_017154.1	Protein Homology	CDS	4332545	4333555	.	+	0	ID=cds3917;Parent=gene4004;Dbxref=Genbank:WP_002355446.1;Name=WP_002355446.1;gbkey=CDS;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_002355446.1;transl_table=11
NC_017154.1	RefSeq	gene	4333723	4335744	.	-	.	ID=gene4005;Name=YPD4_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20085;old_locus_tag=YPD4_3417
NC_017154.1	Protein Homology	CDS	4333723	4335744	.	-	0	ID=cds3918;Parent=gene4005;Dbxref=Genbank:WP_002211993.1;Name=WP_002211993.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_002211993.1;transl_table=11
NC_017154.1	RefSeq	gene	4335743	4335928	.	+	.	ID=gene4006;Name=YPD4_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20090
NC_017154.1	Protein Homology	CDS	4335743	4335928	.	+	0	ID=cds3919;Parent=gene4006;Dbxref=Genbank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11
NC_017154.1	RefSeq	gene	4335948	4336229	.	+	.	ID=gene4007;Name=YPD4_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20095
NC_017154.1	Protein Homology	CDS	4335948	4336229	.	+	0	ID=cds3920;Parent=gene4007;Dbxref=Genbank:WP_002211995.1;Name=WP_002211995.1;Note=rotamase C%3B accelerates isomerization of the peptidyl prolyl bond;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002211995.1;transl_table=11
NC_017154.1	RefSeq	gene	4336468	4337259	.	+	.	ID=gene4008;Name=YPD4_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20100;old_locus_tag=YPD4_3418
NC_017154.1	Protein Homology	CDS	4336468	4337259	.	+	0	ID=cds3921;Parent=gene4008;Dbxref=Genbank:WP_002211996.1;Name=WP_002211996.1;gbkey=CDS;product=glutamine cyclotransferase;protein_id=WP_002211996.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4337284	4338601	.	+	.	ID=id346;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4337356	4338564	.	+	.	ID=gene4009;Name=YPD4_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20105;old_locus_tag=YPD4_3419
NC_017154.1	Protein Homology	CDS	4337356	4338564	.	+	0	ID=cds3922;Parent=gene4009;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017154.1	RefSeq	gene	4338887	4339063	.	-	.	ID=gene4010;Name=YPD4_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20110
NC_017154.1	Protein Homology	CDS	4338887	4339063	.	-	0	ID=cds3923;Parent=gene4010;Dbxref=Genbank:WP_002231894.1;Name=WP_002231894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231894.1;transl_table=11
NC_017154.1	RefSeq	gene	4339374	4339904	.	+	.	ID=gene4011;Name=YPD4_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20115;old_locus_tag=YPD4_3420
NC_017154.1	Protein Homology	CDS	4339374	4339904	.	+	0	ID=cds3924;Parent=gene4011;Dbxref=Genbank:WP_002211997.1;Name=WP_002211997.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11
NC_017154.1	RefSeq	gene	4339968	4340699	.	+	.	ID=gene4012;Name=YPD4_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20120;old_locus_tag=YPD4_3421
NC_017154.1	Protein Homology	CDS	4339968	4340699	.	+	0	ID=cds3925;Parent=gene4012;Dbxref=Genbank:WP_002211998.1;Name=WP_002211998.1;gbkey=CDS;product=gram-negative pili assembly chaperone;protein_id=WP_002211998.1;transl_table=11
NC_017154.1	RefSeq	gene	4340727	4343354	.	+	.	ID=gene4013;Name=YPD4_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20125;old_locus_tag=YPD4_3422
NC_017154.1	Protein Homology	CDS	4340727	4343354	.	+	0	ID=cds3926;Parent=gene4013;Dbxref=Genbank:WP_002211999.1;Name=WP_002211999.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002211999.1;transl_table=11
NC_017154.1	RefSeq	gene	4343461	4344738	.	+	.	ID=gene4014;Name=YPD4_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20130;old_locus_tag=YPD4_3423
NC_017154.1	Protein Homology	CDS	4343461	4344738	.	+	0	ID=cds3927;Parent=gene4014;Dbxref=Genbank:WP_002355452.1;Name=WP_002355452.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002355452.1;transl_table=11
NC_017154.1	RefSeq	gene	4344704	4345525	.	+	.	ID=gene4015;Name=YPD4_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20135
NC_017154.1	Protein Homology	CDS	4344704	4345525	.	+	0	ID=cds3928;Parent=gene4015;Dbxref=Genbank:WP_044023389.1;Name=WP_044023389.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_044023389.1;transl_table=11
NC_017154.1	RefSeq	gene	4345549	4345707	.	+	.	ID=gene4016;Name=YPD4_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20140
NC_017154.1	Protein Homology	CDS	4345549	4345707	.	+	0	ID=cds3929;Parent=gene4016;Dbxref=Genbank:WP_002212002.1;Name=WP_002212002.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212002.1;transl_table=11
NC_017154.1	RefSeq	gene	4346160	4346417	.	-	.	ID=gene4017;Name=YPD4_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20145
NC_017154.1	Protein Homology	CDS	4346160	4346417	.	-	0	ID=cds3930;Parent=gene4017;Dbxref=Genbank:WP_002212003.1;Name=WP_002212003.1;gbkey=CDS;product=colicin transporter;protein_id=WP_002212003.1;transl_table=11
NC_017154.1	RefSeq	gene	4346419	4346670	.	-	.	ID=gene4018;Name=YPD4_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20150
NC_017154.1	Protein Homology	CDS	4346419	4346670	.	-	0	ID=cds3931;Parent=gene4018;Dbxref=Genbank:WP_002215823.1;Name=WP_002215823.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_002215823.1;transl_table=11
NC_017154.1	RefSeq	gene	4346923	4347186	.	-	.	ID=gene4019;Name=YPD4_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20155
NC_017154.1	Protein Homology	CDS	4346923	4347186	.	-	0	ID=cds3932;Parent=gene4019;Dbxref=Genbank:WP_002212004.1;Name=WP_002212004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212004.1;transl_table=11
NC_017154.1	RefSeq	gene	4347186	4348616	.	-	.	ID=gene4020;Name=YPD4_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20160;old_locus_tag=YPD4_3425
NC_017154.1	Protein Homology	CDS	4347186	4348616	.	-	0	ID=cds3933;Parent=gene4020;Dbxref=Genbank:WP_002212005.1;Name=WP_002212005.1;gbkey=CDS;product=colicin;protein_id=WP_002212005.1;transl_table=11
NC_017154.1	RefSeq	gene	4348824	4349024	.	-	.	ID=gene4021;Name=YPD4_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20165
NC_017154.1	Protein Homology	CDS	4348824	4349024	.	-	0	ID=cds3934;Parent=gene4021;Dbxref=Genbank:WP_002212006.1;Name=WP_002212006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212006.1;transl_table=11
NC_017154.1	RefSeq	gene	4349205	4350683	.	-	.	ID=gene4022;Name=YPD4_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20170;old_locus_tag=YPD4_3426
NC_017154.1	Protein Homology	CDS	4349205	4350683	.	-	0	ID=cds3935;Parent=gene4022;Dbxref=Genbank:WP_002212007.1;Name=WP_002212007.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_002212007.1;transl_table=11
NC_017154.1	RefSeq	gene	4350969	4351850	.	+	.	ID=gene4023;Name=YPD4_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20175;old_locus_tag=YPD4_3427
NC_017154.1	Protein Homology	CDS	4350969	4351850	.	+	0	ID=cds3936;Parent=gene4023;Dbxref=Genbank:WP_002212008.1;Name=WP_002212008.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212008.1;transl_table=11
NC_017154.1	RefSeq	gene	4351905	4352114	.	-	.	ID=gene4024;Name=YPD4_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20180
NC_017154.1	Protein Homology	CDS	4351905	4352114	.	-	0	ID=cds3937;Parent=gene4024;Dbxref=Genbank:WP_002212009.1;Name=WP_002212009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212009.1;transl_table=11
NC_017154.1	RefSeq	gene	4352762	4352917	.	+	.	ID=gene4025;Name=YPD4_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20185
NC_017154.1	Protein Homology	CDS	4352762	4352917	.	+	0	ID=cds3938;Parent=gene4025;Dbxref=Genbank:WP_002229747.1;Name=WP_002229747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229747.1;transl_table=11
NC_017154.1	RefSeq	gene	4353010	4353681	.	+	.	ID=gene4026;Name=YPD4_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20190;old_locus_tag=YPD4_3428
NC_017154.1	Protein Homology	CDS	4353010	4353681	.	+	0	ID=cds3939;Parent=gene4026;Dbxref=Genbank:WP_002230570.1;Name=WP_002230570.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230570.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4353617	4354826	.	+	.	ID=id347;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4353665	4354126	.	+	.	ID=gene4027;Name=YPD4_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20195;old_locus_tag=YPD4_3429
NC_017154.1	Protein Homology	CDS	4353665	4354126	.	+	0	ID=cds3940;Parent=gene4027;Dbxref=Genbank:WP_002212010.1;Name=WP_002212010.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212010.1;transl_table=11
NC_017154.1	RefSeq	gene	4354206	4354667	.	+	.	ID=gene4028;Name=YPD4_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20200;old_locus_tag=YPD4_3430
NC_017154.1	Protein Homology	CDS	4354206	4354667	.	+	0	ID=cds3941;Parent=gene4028;Dbxref=Genbank:WP_002217000.1;Name=WP_002217000.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217000.1;transl_table=11
NC_017154.1	RefSeq	gene	4354747	4355211	.	+	.	ID=gene4029;Name=YPD4_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20205;old_locus_tag=YPD4_3431
NC_017154.1	Protein Homology	CDS	4354747	4355211	.	+	0	ID=cds3942;Parent=gene4029;Dbxref=Genbank:WP_002216998.1;Name=WP_002216998.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216998.1;transl_table=11
NC_017154.1	RefSeq	gene	4355342	4356886	.	-	.	ID=gene4030;Name=YPD4_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20210;old_locus_tag=YPD4_3432
NC_017154.1	Protein Homology	CDS	4355342	4356886	.	-	0	ID=cds3943;Parent=gene4030;Dbxref=Genbank:WP_002212013.1;Name=WP_002212013.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;product=threonine dehydratase;protein_id=WP_002212013.1;transl_table=11
NC_017154.1	RefSeq	gene	4356892	4358742	.	-	.	ID=gene4031;Name=YPD4_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20215;old_locus_tag=YPD4_3433
NC_017154.1	Protein Homology	CDS	4356892	4358742	.	-	0	ID=cds3944;Parent=gene4031;Dbxref=Genbank:WP_002212014.1;Name=WP_002212014.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=WP_002212014.1;transl_table=11
NC_017154.1	RefSeq	gene	4359053	4359979	.	-	.	ID=gene4032;Name=YPD4_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20220;old_locus_tag=YPD4_3434
NC_017154.1	Protein Homology	CDS	4359053	4359979	.	-	0	ID=cds3945;Parent=gene4032;Dbxref=Genbank:WP_002212015.1;Name=WP_002212015.1;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=WP_002212015.1;transl_table=11
NC_017154.1	RefSeq	gene	4360002	4360259	.	-	.	ID=gene4033;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=YPD4_RS20225
NC_017154.1	Protein Homology	CDS	4360002	4360259	.	-	0	ID=cds3946;Parent=gene4033;Dbxref=Genbank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase;protein_id=WP_002212016.1;transl_table=11
NC_017154.1	RefSeq	gene	4360256	4361902	.	-	.	ID=gene4034;Name=YPD4_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20230;old_locus_tag=YPD4_3435
NC_017154.1	Protein Homology	CDS	4360256	4361902	.	-	0	ID=cds3947;Parent=gene4034;Dbxref=Genbank:WP_002212017.1;Name=WP_002212017.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002212017.1;transl_table=11
NC_017154.1	RefSeq	gene	4362525	4364048	.	+	.	ID=gene4035;Name=YPD4_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20235;old_locus_tag=YPD4_3436
NC_017154.1	Protein Homology	CDS	4362525	4364048	.	+	0	ID=cds3948;Parent=gene4035;Dbxref=Genbank:WP_002212018.1;Name=WP_002212018.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;product=ATPase;protein_id=WP_002212018.1;transl_table=11
NC_017154.1	RefSeq	gene	4364305	4364643	.	-	.	ID=gene4036;Name=YPD4_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20240;old_locus_tag=YPD4_3437
NC_017154.1	Protein Homology	CDS	4364305	4364643	.	-	0	ID=cds3949;Parent=gene4036;Dbxref=Genbank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212019.1;transl_table=11
NC_017154.1	RefSeq	gene	4364762	4365643	.	+	.	ID=gene4037;Name=YPD4_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20245;old_locus_tag=YPD4_3438
NC_017154.1	Protein Homology	CDS	4364762	4365643	.	+	0	ID=cds3950;Parent=gene4037;Dbxref=Genbank:WP_002212020.1;Name=WP_002212020.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212020.1;transl_table=11
NC_017154.1	RefSeq	gene	4365630	4366622	.	-	.	ID=gene4038;Name=YPD4_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20250;old_locus_tag=YPD4_3439
NC_017154.1	Protein Homology	CDS	4365630	4366622	.	-	0	ID=cds3951;Parent=gene4038;Dbxref=Genbank:WP_002212021.1;Name=WP_002212021.1;Note=membrane component of a putative sugar ABC transporter system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212021.1;transl_table=11
NC_017154.1	RefSeq	gene	4366622	4367620	.	-	.	ID=gene4039;Name=YPD4_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20255;old_locus_tag=YPD4_3440
NC_017154.1	Protein Homology	CDS	4366622	4367620	.	-	0	ID=cds3952;Parent=gene4039;Dbxref=Genbank:WP_002220992.1;Name=WP_002220992.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002220992.1;transl_table=11
NC_017154.1	RefSeq	gene	4367653	4369143	.	-	.	ID=gene4040;Name=YPD4_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20260;old_locus_tag=YPD4_3441
NC_017154.1	Protein Homology	CDS	4367653	4369143	.	-	0	ID=cds3953;Parent=gene4040;Dbxref=Genbank:WP_002212023.1;Name=WP_002212023.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002212023.1;transl_table=11
NC_017154.1	RefSeq	gene	4369229	4370185	.	-	.	ID=gene4041;Name=YPD4_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20265;old_locus_tag=YPD4_3442
NC_017154.1	Protein Homology	CDS	4369229	4370185	.	-	0	ID=cds3954;Parent=gene4041;Dbxref=Genbank:WP_002212024.1;Name=WP_002212024.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002212024.1;transl_table=11
NC_017154.1	RefSeq	gene	4370826	4371036	.	+	.	ID=gene4042;Name=YPD4_RS22445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS22445;pseudo=true
NC_017154.1	Protein Homology	CDS	4370826	4371036	.	+	0	ID=cds3955;Parent=gene4042;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4371163	4371238	.	-	.	ID=gene4043;Name=YPD4_RS20270;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS20270;old_locus_tag=YPD4_t65
NC_017154.1	tRNAscan-SE	tRNA	4371163	4371238	.	-	.	ID=rna81;Parent=gene4043;anticodon=(pos:complement(4371203..4371205));gbkey=tRNA;product=tRNA-Trp
NC_017154.1	tRNAscan-SE	exon	4371163	4371238	.	-	.	ID=id348;Parent=rna81;anticodon=(pos:complement(4371203..4371205));gbkey=tRNA;product=tRNA-Trp
NC_017154.1	RefSeq	repeat_region	4371246	4377022	.	+	.	ID=id349;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4371247	4371323	.	-	.	ID=gene4044;Name=YPD4_RS20275;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS20275;old_locus_tag=YPD4_t66
NC_017154.1	tRNAscan-SE	tRNA	4371247	4371323	.	-	.	ID=rna82;Parent=gene4044;anticodon=(pos:complement(4371287..4371289));gbkey=tRNA;product=tRNA-Asp
NC_017154.1	tRNAscan-SE	exon	4371247	4371323	.	-	.	ID=id350;Parent=rna82;anticodon=(pos:complement(4371287..4371289));gbkey=tRNA;product=tRNA-Asp
NC_017154.1	RefSeq	gene	4371449	4371564	.	-	.	ID=gene4045;Name=YPD4_RS20280;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS20280
NC_017154.1	cmsearch	rRNA	4371449	4371564	.	-	.	ID=rna83;Parent=gene4045;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	cmsearch	exon	4371449	4371564	.	-	.	ID=id351;Parent=rna83;gbkey=rRNA;product=5S ribosomal RNA
NC_017154.1	RefSeq	gene	4371656	4374589	.	-	.	ID=gene4046;Name=YPD4_RS20285;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS20285;old_locus_tag=YPD4_r19
NC_017154.1	RefSeq	rRNA	4371656	4374589	.	-	.	ID=rna84;Parent=gene4046;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	exon	4371656	4374589	.	-	.	ID=id352;Parent=rna84;gbkey=rRNA;product=23S ribosomal RNA
NC_017154.1	RefSeq	gene	4374833	4374908	.	-	.	ID=gene4047;Name=YPD4_RS20290;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS20290;old_locus_tag=YPD4_t67
NC_017154.1	tRNAscan-SE	tRNA	4374833	4374908	.	-	.	ID=rna85;Parent=gene4047;anticodon=(pos:complement(4374872..4374874));gbkey=tRNA;product=tRNA-Glu
NC_017154.1	tRNAscan-SE	exon	4374833	4374908	.	-	.	ID=id353;Parent=rna85;anticodon=(pos:complement(4374872..4374874));gbkey=tRNA;product=tRNA-Glu
NC_017154.1	RefSeq	gene	4375042	4376590	.	-	.	ID=gene4048;Name=YPD4_RS20295;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPD4_RS20295;old_locus_tag=YPD4_r20
NC_017154.1	RefSeq	rRNA	4375042	4376590	.	-	.	ID=rna86;Parent=gene4048;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	exon	4375042	4376590	.	-	.	ID=id354;Parent=rna86;gbkey=rRNA;product=16S ribosomal RNA
NC_017154.1	RefSeq	gene	4377044	4377907	.	-	.	ID=gene4049;Name=YPD4_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20305;old_locus_tag=YPD4_3443
NC_017154.1	Protein Homology	CDS	4377044	4377907	.	-	0	ID=cds3956;Parent=gene4049;Dbxref=Genbank:WP_002228171.1;Name=WP_002228171.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_002228171.1;transl_table=11
NC_017154.1	RefSeq	gene	4377852	4379729	.	-	.	ID=gene4050;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=YPD4_RS20310;old_locus_tag=YPD4_3444
NC_017154.1	Protein Homology	CDS	4377852	4379729	.	-	0	ID=cds3957;Parent=gene4050;Dbxref=Genbank:WP_002228170.1;Name=WP_002228170.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12 transporter BtuB;protein_id=WP_002228170.1;transl_table=11
NC_017154.1	RefSeq	gene	4379965	4380210	.	-	.	ID=gene4051;Name=YPD4_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20315
NC_017154.1	Protein Homology	CDS	4379965	4380210	.	-	0	ID=cds3958;Parent=gene4051;Dbxref=Genbank:WP_002215343.1;Name=WP_002215343.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215343.1;transl_table=11
NC_017154.1	RefSeq	gene	4380209	4381312	.	+	.	ID=gene4052;Name=YPD4_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20320;old_locus_tag=YPD4_3445
NC_017154.1	Protein Homology	CDS	4380209	4381312	.	+	0	ID=cds3959;Parent=gene4052;Dbxref=Genbank:WP_002209474.1;Name=WP_002209474.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA/tmRNA (uracil-C(5))-methyltransferase;protein_id=WP_002209474.1;transl_table=11
NC_017154.1	RefSeq	gene	4381446	4381853	.	-	.	ID=gene4053;Name=YPD4_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20325;old_locus_tag=YPD4_3446
NC_017154.1	Protein Homology	CDS	4381446	4381853	.	-	0	ID=cds3960;Parent=gene4053;Dbxref=Genbank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209475.1;transl_table=11
NC_017154.1	RefSeq	gene	4381866	4382501	.	-	.	ID=gene4054;Name=YPD4_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20330;old_locus_tag=YPD4_3447
NC_017154.1	Protein Homology	CDS	4381866	4382501	.	-	0	ID=cds3961;Parent=gene4054;Dbxref=Genbank:WP_002209476.1;Name=WP_002209476.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209476.1;transl_table=11
NC_017154.1	RefSeq	gene	4382719	4384119	.	+	.	ID=gene4055;Name=YPD4_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20335;old_locus_tag=YPD4_3448
NC_017154.1	Protein Homology	CDS	4382719	4384119	.	+	0	ID=cds3962;Parent=gene4055;Dbxref=Genbank:WP_002209477.1;Name=WP_002209477.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=WP_002209477.1;transl_table=11
NC_017154.1	RefSeq	gene	4384102	4385019	.	-	.	ID=gene4056;Name=YPD4_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20340;old_locus_tag=YPD4_3449
NC_017154.1	Protein Homology	CDS	4384102	4385019	.	-	0	ID=cds3963;Parent=gene4056;Dbxref=Genbank:WP_002209478.1;Name=WP_002209478.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209478.1;transl_table=11
NC_017154.1	RefSeq	gene	4385166	4385897	.	+	.	ID=gene4057;Name=YPD4_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20345;old_locus_tag=YPD4_3450
NC_017154.1	Protein Homology	CDS	4385166	4385897	.	+	0	ID=cds3964;Parent=gene4057;Dbxref=Genbank:WP_002209479.1;Name=WP_002209479.1;gbkey=CDS;product=glutathione amide-dependent peroxidase;protein_id=WP_002209479.1;transl_table=11
NC_017154.1	RefSeq	gene	4385992	4387455	.	+	.	ID=gene4058;Name=YPD4_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20350;old_locus_tag=YPD4_3451
NC_017154.1	Protein Homology	CDS	4385992	4387455	.	+	0	ID=cds3965;Parent=gene4058;Dbxref=Genbank:WP_002209480.1;Name=WP_002209480.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209480.1;transl_table=11
NC_017154.1	RefSeq	gene	4387571	4388374	.	-	.	ID=gene4059;Name=YPD4_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20355;old_locus_tag=YPD4_3452
NC_017154.1	Protein Homology	CDS	4387571	4388374	.	-	0	ID=cds3966;Parent=gene4059;Dbxref=Genbank:WP_002209481.1;Name=WP_002209481.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002209481.1;transl_table=11
NC_017154.1	RefSeq	gene	4388439	4389767	.	-	.	ID=gene4060;Name=YPD4_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20360;old_locus_tag=YPD4_3453
NC_017154.1	Protein Homology	CDS	4388439	4389767	.	-	0	ID=cds3967;Parent=gene4060;Dbxref=Genbank:WP_002209482.1;Name=WP_002209482.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002209482.1;transl_table=11
NC_017154.1	RefSeq	gene	4389843	4391651	.	-	.	ID=gene4061;Name=YPD4_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20365;old_locus_tag=YPD4_3454
NC_017154.1	Protein Homology	CDS	4389843	4391651	.	-	0	ID=cds3968;Parent=gene4061;Dbxref=Genbank:WP_002209483.1;Name=WP_002209483.1;gbkey=CDS;product=peptidase;protein_id=WP_002209483.1;transl_table=11
NC_017154.1	RefSeq	gene	4391817	4392434	.	-	.	ID=gene4062;Name=YPD4_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20370;old_locus_tag=YPD4_3455
NC_017154.1	Protein Homology	CDS	4391817	4392434	.	-	0	ID=cds3969;Parent=gene4062;Dbxref=Genbank:WP_002209484.1;Name=WP_002209484.1;gbkey=CDS;product=hemophore HasA;protein_id=WP_002209484.1;transl_table=11
NC_017154.1	RefSeq	gene	4392656	4395148	.	-	.	ID=gene4063;Name=YPD4_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20375;old_locus_tag=YPD4_3456
NC_017154.1	Protein Homology	CDS	4392656	4395148	.	-	0	ID=cds3970;Parent=gene4063;Dbxref=Genbank:WP_002209485.1;Name=WP_002209485.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002209485.1;transl_table=11
NC_017154.1	RefSeq	gene	4395459	4395584	.	+	.	ID=gene4064;Name=YPD4_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20380
NC_017154.1	Protein Homology	CDS	4395459	4395584	.	+	0	ID=cds3971;Parent=gene4064;Dbxref=Genbank:WP_002209486.1;Name=WP_002209486.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209486.1;transl_table=11
NC_017154.1	RefSeq	gene	4395747	4397120	.	-	.	ID=gene4065;Name=YPD4_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20385;old_locus_tag=YPD4_3457
NC_017154.1	Protein Homology	CDS	4395747	4397120	.	-	0	ID=cds3972;Parent=gene4065;Dbxref=Genbank:WP_002209487.1;Name=WP_002209487.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_002209487.1;transl_table=11
NC_017154.1	RefSeq	gene	4397287	4398061	.	-	.	ID=gene4066;Name=YPD4_RS20390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS20390;pseudo=true
NC_017154.1	Protein Homology	CDS	4397287	4398061	.	-	0	ID=cds3973;Parent=gene4066;exception=annotated by transcript or proteomic data;gbkey=CDS;product=acetylglutamate kinase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4398230	4399234	.	-	.	ID=gene4067;Name=YPD4_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20395;old_locus_tag=YPD4_3459
NC_017154.1	Protein Homology	CDS	4398230	4399234	.	-	0	ID=cds3974;Parent=gene4067;Dbxref=Genbank:WP_002209489.1;Name=WP_002209489.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_002209489.1;transl_table=11
NC_017154.1	RefSeq	gene	4399485	4400648	.	+	.	ID=gene4068;Name=YPD4_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20400;old_locus_tag=YPD4_3460
NC_017154.1	Protein Homology	CDS	4399485	4400648	.	+	0	ID=cds3975;Parent=gene4068;Dbxref=Genbank:WP_002223919.1;Name=WP_002223919.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11
NC_017154.1	RefSeq	gene	4401022	4403658	.	+	.	ID=gene4069;Name=YPD4_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20405;old_locus_tag=YPD4_3461
NC_017154.1	Protein Homology	CDS	4401022	4403658	.	+	0	ID=cds3976;Parent=gene4069;Dbxref=Genbank:WP_002209491.1;Name=WP_002209491.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=WP_002209491.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4404102	4406001	.	+	.	ID=id355;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4404400	4404915	.	+	.	ID=gene4070;Name=YPD4_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20410;old_locus_tag=YPD4_3462
NC_017154.1	Protein Homology	CDS	4404400	4404915	.	+	0	ID=cds3977;Parent=gene4070;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11
NC_017154.1	RefSeq	gene	4404969	4405754	.	+	.	ID=gene4071;Name=YPD4_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20415;old_locus_tag=YPD4_3463
NC_017154.1	Protein Homology	CDS	4404969	4405754	.	+	0	ID=cds3978;Parent=gene4071;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11
NC_017154.1	RefSeq	gene	4406109	4406378	.	-	.	ID=gene4072;Name=YPD4_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20420
NC_017154.1	Protein Homology	CDS	4406109	4406378	.	-	0	ID=cds3979;Parent=gene4072;Dbxref=Genbank:WP_002209494.1;Name=WP_002209494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209494.1;transl_table=11
NC_017154.1	RefSeq	gene	4406543	4407007	.	-	.	ID=gene4073;Name=YPD4_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20425;old_locus_tag=YPD4_3464
NC_017154.1	Protein Homology	CDS	4406543	4407007	.	-	0	ID=cds3980;Parent=gene4073;Dbxref=Genbank:WP_002209495.1;Name=WP_002209495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209495.1;transl_table=11
NC_017154.1	RefSeq	gene	4407316	4407690	.	-	.	ID=gene4074;Name=YPD4_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20430
NC_017154.1	Protein Homology	CDS	4407316	4407690	.	-	0	ID=cds3981;Parent=gene4074;Dbxref=Genbank:WP_002217865.1;Name=WP_002217865.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217865.1;transl_table=11
NC_017154.1	RefSeq	gene	4408089	4409603	.	+	.	ID=gene4075;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=YPD4_RS20435;old_locus_tag=YPD4_3465
NC_017154.1	Protein Homology	CDS	4408089	4409603	.	+	0	ID=cds3982;Parent=gene4075;Dbxref=Genbank:WP_002226019.1;Name=WP_002226019.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002226019.1;transl_table=11
NC_017154.1	RefSeq	gene	4409766	4412213	.	-	.	ID=gene4076;Name=YPD4_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20440;old_locus_tag=YPD4_3466
NC_017154.1	Protein Homology	CDS	4409766	4412213	.	-	0	ID=cds3983;Parent=gene4076;Dbxref=Genbank:WP_002209497.1;Name=WP_002209497.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_002209497.1;transl_table=11
NC_017154.1	RefSeq	gene	4412366	4413796	.	-	.	ID=gene4077;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=YPD4_RS20445;old_locus_tag=YPD4_3467
NC_017154.1	Protein Homology	CDS	4412366	4413796	.	-	0	ID=cds3984;Parent=gene4077;Dbxref=Genbank:WP_002209498.1;Name=WP_002209498.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=WP_002209498.1;transl_table=11
NC_017154.1	RefSeq	gene	4413864	4415294	.	-	.	ID=gene4078;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=YPD4_RS20450;old_locus_tag=YPD4_3468
NC_017154.1	Protein Homology	CDS	4413864	4415294	.	-	0	ID=cds3985;Parent=gene4078;Dbxref=Genbank:WP_002214589.1;Name=WP_002214589.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_002214589.1;transl_table=11
NC_017154.1	RefSeq	gene	4415304	4417292	.	-	.	ID=gene4079;Name=YPD4_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20455;old_locus_tag=YPD4_3469
NC_017154.1	Protein Homology	CDS	4415304	4417292	.	-	0	ID=cds3986;Parent=gene4079;Dbxref=Genbank:WP_002209499.1;Name=WP_002209499.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;protein_id=WP_002209499.1;transl_table=11
NC_017154.1	RefSeq	gene	4417294	4419477	.	-	.	ID=gene4080;Name=YPD4_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20460;old_locus_tag=YPD4_3470
NC_017154.1	Protein Homology	CDS	4417294	4419477	.	-	0	ID=cds3987;Parent=gene4080;Dbxref=Genbank:WP_002209500.1;Name=WP_002209500.1;gbkey=CDS;product=1%2C4-alpha-glucan-branching protein;protein_id=WP_002209500.1;transl_table=11
NC_017154.1	RefSeq	gene	4419983	4421680	.	+	.	ID=gene4081;Name=YPD4_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20465;old_locus_tag=YPD4_3471
NC_017154.1	Protein Homology	CDS	4419983	4421680	.	+	0	ID=cds3988;Parent=gene4081;Dbxref=Genbank:WP_002209502.1;Name=WP_002209502.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002209502.1;transl_table=11
NC_017154.1	RefSeq	gene	4421888	4430689	.	-	.	ID=gene4082;Name=YPD4_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20470;old_locus_tag=YPD4_3472
NC_017154.1	Protein Homology	CDS	4421888	4430689	.	-	0	ID=cds3989;Parent=gene4082;Dbxref=Genbank:WP_002209503.1;Name=WP_002209503.1;gbkey=CDS;product=invasin;protein_id=WP_002209503.1;transl_table=11
NC_017154.1	RefSeq	gene	4432233	4432574	.	+	.	ID=gene4083;Name=YPD4_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20475
NC_017154.1	Protein Homology	CDS	4432233	4432574	.	+	0	ID=cds3990;Parent=gene4083;Dbxref=Genbank:WP_011171941.1;Name=WP_011171941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171941.1;transl_table=11
NC_017154.1	RefSeq	gene	4432665	4432952	.	-	.	ID=gene4084;Name=YPD4_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20480
NC_017154.1	Protein Homology	CDS	4432665	4432952	.	-	0	ID=cds3991;Parent=gene4084;Dbxref=Genbank:WP_002209504.1;Name=WP_002209504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209504.1;transl_table=11
NC_017154.1	RefSeq	gene	4432959	4433258	.	-	.	ID=gene4085;Name=YPD4_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20485
NC_017154.1	Protein Homology	CDS	4432959	4433258	.	-	0	ID=cds3992;Parent=gene4085;Dbxref=Genbank:WP_002209505.1;Name=WP_002209505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209505.1;transl_table=11
NC_017154.1	RefSeq	gene	4433574	4433855	.	-	.	ID=gene4086;Name=YPD4_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20490
NC_017154.1	Protein Homology	CDS	4433574	4433855	.	-	0	ID=cds3993;Parent=gene4086;Dbxref=Genbank:WP_002214584.1;Name=WP_002214584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214584.1;transl_table=11
NC_017154.1	RefSeq	gene	4434024	4435127	.	-	.	ID=gene4087;Name=YPD4_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20495;old_locus_tag=YPD4_3473
NC_017154.1	Protein Homology	CDS	4434024	4435127	.	-	0	ID=cds3994;Parent=gene4087;Dbxref=Genbank:WP_002209507.1;Name=WP_002209507.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209507.1;transl_table=11
NC_017154.1	RefSeq	gene	4435485	4436078	.	+	.	ID=gene4088;Name=YPD4_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20500;old_locus_tag=YPD4_3474
NC_017154.1	Protein Homology	CDS	4435485	4436078	.	+	0	ID=cds3995;Parent=gene4088;Dbxref=Genbank:WP_002209508.1;Name=WP_002209508.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209508.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4436169	4436271	.	+	.	ID=id356;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4436318	4436707	.	-	.	ID=gene4089;Name=YPD4_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20505;old_locus_tag=YPD4_3475
NC_017154.1	Protein Homology	CDS	4436318	4436707	.	-	0	ID=cds3996;Parent=gene4089;Dbxref=Genbank:WP_002209509.1;Name=WP_002209509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209509.1;transl_table=11
NC_017154.1	RefSeq	gene	4436762	4436902	.	-	.	ID=gene4090;Name=YPD4_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20510
NC_017154.1	Protein Homology	CDS	4436762	4436902	.	-	0	ID=cds3997;Parent=gene4090;Dbxref=Genbank:WP_002209510.1;Name=WP_002209510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209510.1;transl_table=11
NC_017154.1	RefSeq	gene	4437092	4437325	.	-	.	ID=gene4091;Name=YPD4_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20515
NC_017154.1	Protein Homology	CDS	4437092	4437325	.	-	0	ID=cds3998;Parent=gene4091;Dbxref=Genbank:WP_002209511.1;Name=WP_002209511.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002209511.1;transl_table=11
NC_017154.1	RefSeq	gene	4437507	4438010	.	-	.	ID=gene4092;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPD4_RS20520;old_locus_tag=YPD4_3476
NC_017154.1	Protein Homology	CDS	4437507	4438010	.	-	0	ID=cds3999;Parent=gene4092;Dbxref=Genbank:WP_002209512.1;Name=WP_002209512.1;gbkey=CDS;gene=idnK;product=gluconokinase;protein_id=WP_002209512.1;transl_table=11
NC_017154.1	RefSeq	gene	4438227	4439543	.	+	.	ID=gene4093;Name=YPD4_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20525;old_locus_tag=YPD4_3477
NC_017154.1	Protein Homology	CDS	4438227	4439543	.	+	0	ID=cds4000;Parent=gene4093;Dbxref=Genbank:WP_002209513.1;Name=WP_002209513.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002209513.1;transl_table=11
NC_017154.1	RefSeq	gene	4439635	4440630	.	-	.	ID=gene4094;Name=YPD4_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20530;old_locus_tag=YPD4_3478
NC_017154.1	Protein Homology	CDS	4439635	4440630	.	-	0	ID=cds4001;Parent=gene4094;Dbxref=Genbank:WP_002209514.1;Name=WP_002209514.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209514.1;transl_table=11
NC_017154.1	RefSeq	gene	4440759	4441454	.	-	.	ID=gene4095;Name=YPD4_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20535;old_locus_tag=YPD4_3479
NC_017154.1	Protein Homology	CDS	4440759	4441454	.	-	0	ID=cds4002;Parent=gene4095;Dbxref=Genbank:WP_002209515.1;Name=WP_002209515.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002209515.1;transl_table=11
NC_017154.1	RefSeq	gene	4441949	4442218	.	+	.	ID=gene4096;Name=YPD4_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20540
NC_017154.1	Protein Homology	CDS	4441949	4442218	.	+	0	ID=cds4003;Parent=gene4096;Dbxref=Genbank:WP_002215491.1;Name=WP_002215491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215491.1;transl_table=11
NC_017154.1	RefSeq	gene	4442218	4442955	.	+	.	ID=gene4097;Name=YPD4_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20545;old_locus_tag=YPD4_3480
NC_017154.1	Protein Homology	CDS	4442218	4442955	.	+	0	ID=cds4004;Parent=gene4097;Dbxref=Genbank:WP_002209516.1;Name=WP_002209516.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209516.1;transl_table=11
NC_017154.1	RefSeq	gene	4443140	4444147	.	-	.	ID=gene4098;Name=YPD4_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20550;old_locus_tag=YPD4_3481
NC_017154.1	Protein Homology	CDS	4443140	4444147	.	-	0	ID=cds4005;Parent=gene4098;Dbxref=Genbank:WP_002209518.1;Name=WP_002209518.1;gbkey=CDS;product=sugar kinase;protein_id=WP_002209518.1;transl_table=11
NC_017154.1	RefSeq	gene	4444157	4445017	.	-	.	ID=gene4099;Name=YPD4_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20555;old_locus_tag=YPD4_3482
NC_017154.1	Protein Homology	CDS	4444157	4445017	.	-	0	ID=cds4006;Parent=gene4099;Dbxref=Genbank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209519.1;transl_table=11
NC_017154.1	RefSeq	gene	4445043	4445726	.	-	.	ID=gene4100;Name=YPD4_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20560;old_locus_tag=YPD4_3483
NC_017154.1	Protein Homology	CDS	4445043	4445726	.	-	0	ID=cds4007;Parent=gene4100;Dbxref=Genbank:WP_002209520.1;Name=WP_002209520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209520.1;transl_table=11
NC_017154.1	RefSeq	gene	4445801	4446745	.	-	.	ID=gene4101;Name=YPD4_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20565;old_locus_tag=YPD4_3484
NC_017154.1	Protein Homology	CDS	4445801	4446745	.	-	0	ID=cds4008;Parent=gene4101;Dbxref=Genbank:WP_002209521.1;Name=WP_002209521.1;gbkey=CDS;product=ribose ABC transporter substrate-binding protein;protein_id=WP_002209521.1;transl_table=11
NC_017154.1	RefSeq	gene	4446776	4447768	.	-	.	ID=gene4102;Name=YPD4_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20570;old_locus_tag=YPD4_3485
NC_017154.1	Protein Homology	CDS	4446776	4447768	.	-	0	ID=cds4009;Parent=gene4102;Dbxref=Genbank:WP_002209522.1;Name=WP_002209522.1;gbkey=CDS;product=ribose ABC transporter permease;protein_id=WP_002209522.1;transl_table=11
NC_017154.1	RefSeq	gene	4447761	4449284	.	-	.	ID=gene4103;Name=YPD4_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20575;old_locus_tag=YPD4_3486
NC_017154.1	Protein Homology	CDS	4447761	4449284	.	-	0	ID=cds4010;Parent=gene4103;Dbxref=Genbank:WP_002209523.1;Name=WP_002209523.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=WP_002209523.1;transl_table=11
NC_017154.1	RefSeq	gene	4449473	4452028	.	+	.	ID=gene4104;Name=YPD4_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20580;old_locus_tag=YPD4_3487
NC_017154.1	Protein Homology	CDS	4449473	4452028	.	+	0	ID=cds4011;Parent=gene4104;Dbxref=Genbank:WP_002209524.1;Name=WP_002209524.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209524.1;transl_table=11
NC_017154.1	RefSeq	gene	4452164	4453360	.	-	.	ID=gene4105;Name=YPD4_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20585;old_locus_tag=YPD4_3488
NC_017154.1	Protein Homology	CDS	4452164	4453360	.	-	0	ID=cds4012;Parent=gene4105;Dbxref=Genbank:WP_002215486.1;Name=WP_002215486.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215486.1;transl_table=11
NC_017154.1	RefSeq	gene	4453672	4455168	.	+	.	ID=gene4106;Name=YPD4_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20590;old_locus_tag=YPD4_3489
NC_017154.1	Protein Homology	CDS	4453672	4455168	.	+	0	ID=cds4013;Parent=gene4106;Dbxref=Genbank:WP_002209526.1;Name=WP_002209526.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_002209526.1;transl_table=11
NC_017154.1	RefSeq	gene	4455274	4455444	.	+	.	ID=gene4107;Name=YPD4_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20595
NC_017154.1	Protein Homology	CDS	4455274	4455444	.	+	0	ID=cds4014;Parent=gene4107;Dbxref=Genbank:WP_025470767.1;Name=WP_025470767.1;gbkey=CDS;product=transposase;protein_id=WP_025470767.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4455278	4456002	.	+	.	ID=id357;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4455434	4455892	.	+	.	ID=gene4108;Name=YPD4_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20600;old_locus_tag=YPD4_3490
NC_017154.1	Protein Homology	CDS	4455434	4455892	.	+	0	ID=cds4015;Parent=gene4108;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017154.1	RefSeq	gene	4456025	4456360	.	-	.	ID=gene4109;Name=YPD4_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20605;old_locus_tag=YPD4_3491
NC_017154.1	Protein Homology	CDS	4456025	4456360	.	-	0	ID=cds4016;Parent=gene4109;Dbxref=Genbank:WP_002209527.1;Name=WP_002209527.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein B;protein_id=WP_002209527.1;transl_table=11
NC_017154.1	RefSeq	gene	4457068	4457514	.	+	.	ID=gene4110;Name=YPD4_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20610;old_locus_tag=YPD4_3492
NC_017154.1	Protein Homology	CDS	4457068	4457514	.	+	0	ID=cds4017;Parent=gene4110;Dbxref=Genbank:WP_002209528.1;Name=WP_002209528.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=universal stress protein A;protein_id=WP_002209528.1;transl_table=11
NC_017154.1	RefSeq	gene	4457761	4459104	.	+	.	ID=gene4111;Name=YPD4_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20615;old_locus_tag=YPD4_3493
NC_017154.1	Protein Homology	CDS	4457761	4459104	.	+	0	ID=cds4018;Parent=gene4111;Dbxref=Genbank:WP_002209529.1;Name=WP_002209529.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11
NC_017154.1	RefSeq	gene	4459352	4460686	.	+	.	ID=gene4112;Name=YPD4_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20620;old_locus_tag=YPD4_3494
NC_017154.1	Protein Homology	CDS	4459352	4460686	.	+	0	ID=cds4019;Parent=gene4112;Dbxref=Genbank:WP_002209530.1;Name=WP_002209530.1;gbkey=CDS;product=peptidase M10;protein_id=WP_002209530.1;transl_table=11
NC_017154.1	RefSeq	gene	4460751	4461521	.	-	.	ID=gene4113;Name=YPD4_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20625;old_locus_tag=YPD4_3495
NC_017154.1	Protein Homology	CDS	4460751	4461521	.	-	0	ID=cds4020;Parent=gene4113;Dbxref=Genbank:WP_002215483.1;Name=WP_002215483.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase J;protein_id=WP_002215483.1;transl_table=11
NC_017154.1	RefSeq	gene	4461525	4463567	.	-	.	ID=gene4114;Name=YPD4_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20630;old_locus_tag=YPD4_3496
NC_017154.1	Protein Homology	CDS	4461525	4463567	.	-	0	ID=cds4021;Parent=gene4114;Dbxref=Genbank:WP_002209531.1;Name=WP_002209531.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_002209531.1;transl_table=11
NC_017154.1	RefSeq	gene	4463896	4464738	.	+	.	ID=gene4115;Name=YPD4_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20635;old_locus_tag=YPD4_3497
NC_017154.1	Protein Homology	CDS	4463896	4464738	.	+	0	ID=cds4022;Parent=gene4115;Dbxref=Genbank:WP_002209533.1;Name=WP_002209533.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209533.1;transl_table=11
NC_017154.1	RefSeq	gene	4464924	4466276	.	+	.	ID=gene4116;Name=YPD4_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20640;old_locus_tag=YPD4_3498
NC_017154.1	Protein Homology	CDS	4464924	4466276	.	+	0	ID=cds4023;Parent=gene4116;Dbxref=Genbank:WP_002209534.1;Name=WP_002209534.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_002209534.1;transl_table=11
NC_017154.1	RefSeq	gene	4466468	4467595	.	+	.	ID=gene4117;Name=YPD4_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20645;old_locus_tag=YPD4_3499
NC_017154.1	Protein Homology	CDS	4466468	4467595	.	+	0	ID=cds4024;Parent=gene4117;Dbxref=Genbank:WP_002209535.1;Name=WP_002209535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209535.1;transl_table=11
NC_017154.1	RefSeq	gene	4467773	4469041	.	+	.	ID=gene4118;Name=YPD4_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20650;old_locus_tag=YPD4_3500
NC_017154.1	Protein Homology	CDS	4467773	4469041	.	+	0	ID=cds4025;Parent=gene4118;Dbxref=Genbank:WP_002209536.1;Name=WP_002209536.1;gbkey=CDS;product=gluconate:proton symporter;protein_id=WP_002209536.1;transl_table=11
NC_017154.1	RefSeq	gene	4469052	4470188	.	+	.	ID=gene4119;Name=YPD4_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20655;old_locus_tag=YPD4_3501
NC_017154.1	Protein Homology	CDS	4469052	4470188	.	+	0	ID=cds4026;Parent=gene4119;Dbxref=Genbank:WP_002209537.1;Name=WP_002209537.1;gbkey=CDS;product=glycerate kinase;protein_id=WP_002209537.1;transl_table=11
NC_017154.1	RefSeq	gene	4470434	4470940	.	-	.	ID=gene4120;Name=YPD4_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20660;old_locus_tag=YPD4_3502
NC_017154.1	Protein Homology	CDS	4470434	4470940	.	-	0	ID=cds4027;Parent=gene4120;Dbxref=Genbank:WP_002209538.1;Name=WP_002209538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209538.1;transl_table=11
NC_017154.1	RefSeq	gene	4471008	4471505	.	-	.	ID=gene4121;Name=YPD4_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20665;old_locus_tag=YPD4_3503
NC_017154.1	Protein Homology	CDS	4471008	4471505	.	-	0	ID=cds4028;Parent=gene4121;Dbxref=Genbank:WP_002209539.1;Name=WP_002209539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209539.1;transl_table=11
NC_017154.1	RefSeq	gene	4471507	4472286	.	-	.	ID=gene4122;Name=YPD4_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20670;old_locus_tag=YPD4_3504
NC_017154.1	Protein Homology	CDS	4471507	4472286	.	-	0	ID=cds4029;Parent=gene4122;Dbxref=Genbank:WP_002209540.1;Name=WP_002209540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209540.1;transl_table=11
NC_017154.1	RefSeq	gene	4472464	4475676	.	-	.	ID=gene4123;Name=YPD4_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20675;old_locus_tag=YPD4_3505
NC_017154.1	Protein Homology	CDS	4472464	4475676	.	-	0	ID=cds4030;Parent=gene4123;Dbxref=Genbank:WP_002214773.1;Name=WP_002214773.1;gbkey=CDS;product=autotransporter;protein_id=WP_002214773.1;transl_table=11
NC_017154.1	RefSeq	gene	4476354	4477436	.	+	.	ID=gene4124;Name=YPD4_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20680;old_locus_tag=YPD4_3506
NC_017154.1	Protein Homology	CDS	4476354	4477436	.	+	0	ID=cds4031;Parent=gene4124;Dbxref=Genbank:WP_002209545.1;Name=WP_002209545.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209545.1;transl_table=11
NC_017154.1	RefSeq	gene	4477440	4478237	.	+	.	ID=gene4125;Name=YPD4_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20685;old_locus_tag=YPD4_3507
NC_017154.1	Protein Homology	CDS	4477440	4478237	.	+	0	ID=cds4032;Parent=gene4125;Dbxref=Genbank:WP_002209546.1;Name=WP_002209546.1;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=WP_002209546.1;transl_table=11
NC_017154.1	RefSeq	gene	4478214	4480430	.	-	.	ID=gene4126;Name=YPD4_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20690;old_locus_tag=YPD4_3508
NC_017154.1	Protein Homology	CDS	4478214	4480430	.	-	0	ID=cds4033;Parent=gene4126;Dbxref=Genbank:WP_002228712.1;Name=WP_002228712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228712.1;transl_table=11
NC_017154.1	RefSeq	gene	4480735	4481580	.	-	.	ID=gene4127;Name=YPD4_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20695;old_locus_tag=YPD4_3509
NC_017154.1	Protein Homology	CDS	4480735	4481580	.	-	0	ID=cds4034;Parent=gene4127;Dbxref=Genbank:WP_002209547.1;Name=WP_002209547.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;product=cyclic di-GMP phosphodiesterase;protein_id=WP_002209547.1;transl_table=11
NC_017154.1	RefSeq	gene	4481799	4481999	.	+	.	ID=gene4128;Name=YPD4_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20700
NC_017154.1	Protein Homology	CDS	4481799	4481999	.	+	0	ID=cds4035;Parent=gene4128;Dbxref=Genbank:WP_002209548.1;Name=WP_002209548.1;gbkey=CDS;product=tautomerase;protein_id=WP_002209548.1;transl_table=11
NC_017154.1	RefSeq	gene	4482278	4483222	.	+	.	ID=gene4129;Name=YPD4_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20705;old_locus_tag=YPD4_3510
NC_017154.1	Protein Homology	CDS	4482278	4483222	.	+	0	ID=cds4036;Parent=gene4129;Dbxref=Genbank:WP_002209549.1;Name=WP_002209549.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_002209549.1;transl_table=11
NC_017154.1	RefSeq	gene	4483386	4484885	.	-	.	ID=gene4130;Name=YPD4_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20710;old_locus_tag=YPD4_3511
NC_017154.1	Protein Homology	CDS	4483386	4484885	.	-	0	ID=cds4037;Parent=gene4130;Dbxref=Genbank:WP_002209550.1;Name=WP_002209550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209550.1;transl_table=11
NC_017154.1	RefSeq	gene	4485250	4486539	.	-	.	ID=gene4131;Name=YPD4_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20715;old_locus_tag=YPD4_3512
NC_017154.1	Protein Homology	CDS	4485250	4486539	.	-	0	ID=cds4038;Parent=gene4131;Dbxref=Genbank:WP_002209553.1;Name=WP_002209553.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_002209553.1;transl_table=11
NC_017154.1	RefSeq	gene	4486994	4487473	.	-	.	ID=gene4132;Name=YPD4_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20720;old_locus_tag=YPD4_3513
NC_017154.1	Protein Homology	CDS	4486994	4487473	.	-	0	ID=cds4039;Parent=gene4132;Dbxref=Genbank:WP_002209554.1;Name=WP_002209554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209554.1;transl_table=11
NC_017154.1	RefSeq	gene	4487598	4489316	.	-	.	ID=gene4133;Name=YPD4_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20725;old_locus_tag=YPD4_3514
NC_017154.1	Protein Homology	CDS	4487598	4489316	.	-	0	ID=cds4040;Parent=gene4133;Dbxref=Genbank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11
NC_017154.1	RefSeq	gene	4489562	4490266	.	-	.	ID=gene4134;Name=YPD4_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20730;old_locus_tag=YPD4_3515
NC_017154.1	Protein Homology	CDS	4489562	4490266	.	-	0	ID=cds4041;Parent=gene4134;Dbxref=Genbank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;product=porin;protein_id=WP_002209559.1;transl_table=11
NC_017154.1	RefSeq	gene	4490906	4492888	.	-	.	ID=gene4135;Name=YPD4_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20735;old_locus_tag=YPD4_3516
NC_017154.1	Protein Homology	CDS	4490906	4492888	.	-	0	ID=cds4042;Parent=gene4135;Dbxref=Genbank:WP_002214767.1;Name=WP_002214767.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;gbkey=CDS;product=biofilm formation regulator HmsP;protein_id=WP_002214767.1;transl_table=11
NC_017154.1	RefSeq	gene	4493235	4494134	.	-	.	ID=gene4136;Name=YPD4_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20740;old_locus_tag=YPD4_3517
NC_017154.1	Protein Homology	CDS	4493235	4494134	.	-	0	ID=cds4043;Parent=gene4136;Dbxref=Genbank:WP_002214765.1;Name=WP_002214765.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;product=endonuclease III;protein_id=WP_002214765.1;transl_table=11
NC_017154.1	RefSeq	gene	4494453	4495460	.	-	.	ID=gene4137;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=YPD4_RS20745;old_locus_tag=YPD4_3518
NC_017154.1	Protein Homology	CDS	4494453	4495460	.	-	0	ID=cds4044;Parent=gene4137;Dbxref=Genbank:WP_002228160.1;Name=WP_002228160.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002228160.1;transl_table=11
NC_017154.1	RefSeq	gene	4495526	4496506	.	-	.	ID=gene4138;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=YPD4_RS20750;old_locus_tag=YPD4_3519
NC_017154.1	Protein Homology	CDS	4495526	4496506	.	-	0	ID=cds4045;Parent=gene4138;Dbxref=Genbank:WP_002209562.1;Name=WP_002209562.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11
NC_017154.1	RefSeq	gene	4496520	4497422	.	-	.	ID=gene4139;Name=YPD4_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20755;old_locus_tag=YPD4_3520
NC_017154.1	Protein Homology	CDS	4496520	4497422	.	-	0	ID=cds4046;Parent=gene4139;Dbxref=Genbank:WP_002209563.1;Name=WP_002209563.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002209563.1;transl_table=11
NC_017154.1	RefSeq	gene	4497504	4498451	.	-	.	ID=gene4140;Name=YPD4_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20760;old_locus_tag=YPD4_3521
NC_017154.1	Protein Homology	CDS	4497504	4498451	.	-	0	ID=cds4047;Parent=gene4140;Dbxref=Genbank:WP_002217330.1;Name=WP_002217330.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002217330.1;transl_table=11
NC_017154.1	RefSeq	gene	4498747	4500342	.	-	.	ID=gene4141;Name=YPD4_RS20765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS20765;old_locus_tag=YPD4_3522;partial=true;pseudo=true;start_range=.,4498747
NC_017154.1	Protein Homology	CDS	4498747	4500342	.	-	0	ID=cds4048;Parent=gene4141;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=peptide ABC transporter substrate-binding protein;pseudo=true;start_range=.,4498747;transl_table=11
NC_017154.1	RefSeq	gene	4500745	4500951	.	-	.	ID=gene4142;Name=YPD4_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20770
NC_017154.1	Protein Homology	CDS	4500745	4500951	.	-	0	ID=cds4049;Parent=gene4142;Dbxref=Genbank:WP_002217329.1;Name=WP_002217329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217329.1;transl_table=11
NC_017154.1	RefSeq	gene	4501011	4502681	.	-	.	ID=gene4143;Name=YPD4_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20775;old_locus_tag=YPD4_3523
NC_017154.1	Protein Homology	CDS	4501011	4502681	.	-	0	ID=cds4050;Parent=gene4143;Dbxref=Genbank:WP_002209565.1;Name=WP_002209565.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002209565.1;transl_table=11
NC_017154.1	RefSeq	gene	4502883	4504275	.	-	.	ID=gene4144;Name=YPD4_RS20780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS20780;pseudo=true
NC_017154.1	Protein Homology	CDS	4502883	4504275	.	-	0	ID=cds4051;Parent=gene4144;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hemagglutinin;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4504588	4504664	.	-	.	ID=gene4145;Name=YPD4_RS20785;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPD4_RS20785;old_locus_tag=YPD4_t68
NC_017154.1	tRNAscan-SE	tRNA	4504588	4504664	.	-	.	ID=rna87;Parent=gene4145;anticodon=(pos:complement(4504628..4504630));gbkey=tRNA;product=tRNA-Pro
NC_017154.1	tRNAscan-SE	exon	4504588	4504664	.	-	.	ID=id358;Parent=rna87;anticodon=(pos:complement(4504628..4504630));gbkey=tRNA;product=tRNA-Pro
NC_017154.1	RefSeq	gene	4504781	4506112	.	-	.	ID=gene4146;Name=YPD4_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20790;old_locus_tag=YPD4_3525
NC_017154.1	Protein Homology	CDS	4504781	4506112	.	-	0	ID=cds4052;Parent=gene4146;Dbxref=Genbank:WP_002209567.1;Name=WP_002209567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209567.1;transl_table=11
NC_017154.1	RefSeq	gene	4506207	4506887	.	-	.	ID=gene4147;Name=YPD4_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20795;old_locus_tag=YPD4_3526
NC_017154.1	Protein Homology	CDS	4506207	4506887	.	-	0	ID=cds4053;Parent=gene4147;Dbxref=Genbank:WP_002361295.1;Name=WP_002361295.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002361295.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4506944	4508902	.	+	.	ID=id359;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4507012	4507791	.	-	.	ID=gene4148;Name=YPD4_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20800;old_locus_tag=YPD4_3527
NC_017154.1	Protein Homology	CDS	4507012	4507791	.	-	0	ID=cds4054;Parent=gene4148;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017154.1	RefSeq	gene	4507791	4508813	.	-	.	ID=gene4149;Name=YPD4_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20805;old_locus_tag=YPD4_3528
NC_017154.1	Protein Homology	CDS	4507791	4508813	.	-	0	ID=cds4055;Parent=gene4149;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017154.1	RefSeq	gene	4508895	4509695	.	-	.	ID=gene4150;Name=YPD4_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20810;old_locus_tag=YPD4_3529
NC_017154.1	Protein Homology	CDS	4508895	4509695	.	-	0	ID=cds4056;Parent=gene4150;Dbxref=Genbank:WP_002209569.1;Name=WP_002209569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209569.1;transl_table=11
NC_017154.1	RefSeq	gene	4509692	4510282	.	-	.	ID=gene4151;Name=YPD4_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20815;old_locus_tag=YPD4_3530
NC_017154.1	Protein Homology	CDS	4509692	4510282	.	-	0	ID=cds4057;Parent=gene4151;Dbxref=Genbank:WP_002209570.1;Name=WP_002209570.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209570.1;transl_table=11
NC_017154.1	RefSeq	gene	4510398	4512089	.	-	.	ID=gene4152;Name=YPD4_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20820;old_locus_tag=YPD4_3531
NC_017154.1	Protein Homology	CDS	4510398	4512089	.	-	0	ID=cds4058;Parent=gene4152;Dbxref=Genbank:WP_002209571.1;Name=WP_002209571.1;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;gbkey=CDS;product=phosphoethanolamine transferase;protein_id=WP_002209571.1;transl_table=11
NC_017154.1	RefSeq	gene	4512627	4514090	.	-	.	ID=gene4153;Name=YPD4_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20825;old_locus_tag=YPD4_3532
NC_017154.1	Protein Homology	CDS	4512627	4514090	.	-	0	ID=cds4059;Parent=gene4153;Dbxref=Genbank:WP_002209573.1;Name=WP_002209573.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209573.1;transl_table=11
NC_017154.1	RefSeq	gene	4514558	4515961	.	-	.	ID=gene4154;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPD4_RS20830;old_locus_tag=YPD4_3533
NC_017154.1	Protein Homology	CDS	4514558	4515961	.	-	0	ID=cds4060;Parent=gene4154;Dbxref=Genbank:WP_002214368.1;Name=WP_002214368.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002214368.1;transl_table=11
NC_017154.1	RefSeq	gene	4516379	4517911	.	-	.	ID=gene4155;Name=YPD4_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20835;old_locus_tag=YPD4_3534
NC_017154.1	Protein Homology	CDS	4516379	4517911	.	-	0	ID=cds4061;Parent=gene4155;Dbxref=Genbank:WP_002209575.1;Name=WP_002209575.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;product=histidine ammonia-lyase;protein_id=WP_002209575.1;transl_table=11
NC_017154.1	RefSeq	gene	4517908	4519599	.	-	.	ID=gene4156;Name=YPD4_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20840;old_locus_tag=YPD4_3535
NC_017154.1	Protein Homology	CDS	4517908	4519599	.	-	0	ID=cds4062;Parent=gene4156;Dbxref=Genbank:WP_002209576.1;Name=WP_002209576.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;product=urocanate hydratase;protein_id=WP_002209576.1;transl_table=11
NC_017154.1	RefSeq	gene	4520326	4521270	.	+	.	ID=gene4157;Name=YPD4_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20845;old_locus_tag=YPD4_3536
NC_017154.1	Protein Homology	CDS	4520326	4521270	.	+	0	ID=cds4063;Parent=gene4157;Dbxref=Genbank:WP_002209577.1;Name=WP_002209577.1;gbkey=CDS;product=pyridoxal-5'-phosphate-dependent protein;protein_id=WP_002209577.1;transl_table=11
NC_017154.1	RefSeq	gene	4521267	4521833	.	+	.	ID=gene4158;Name=YPD4_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20850;old_locus_tag=YPD4_3537
NC_017154.1	Protein Homology	CDS	4521267	4521833	.	+	0	ID=cds4064;Parent=gene4158;Dbxref=Genbank:WP_002209578.1;Name=WP_002209578.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_002209578.1;transl_table=11
NC_017154.1	RefSeq	gene	4521916	4522845	.	+	.	ID=gene4159;Name=YPD4_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20855;old_locus_tag=YPD4_3538
NC_017154.1	Protein Homology	CDS	4521916	4522845	.	+	0	ID=cds4065;Parent=gene4159;Dbxref=Genbank:WP_002209579.1;Name=WP_002209579.1;gbkey=CDS;product=transporter;protein_id=WP_002209579.1;transl_table=11
NC_017154.1	RefSeq	gene	4522847	4524091	.	+	.	ID=gene4160;Name=YPD4_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20860;old_locus_tag=YPD4_3539
NC_017154.1	Protein Homology	CDS	4522847	4524091	.	+	0	ID=cds4066;Parent=gene4160;Dbxref=Genbank:WP_002209580.1;Name=WP_002209580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209580.1;transl_table=11
NC_017154.1	RefSeq	gene	4524614	4525567	.	+	.	ID=gene4161;Name=YPD4_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20865;old_locus_tag=YPD4_3540
NC_017154.1	Protein Homology	CDS	4524614	4525567	.	+	0	ID=cds4067;Parent=gene4161;Dbxref=Genbank:WP_002209581.1;Name=WP_002209581.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002209581.1;transl_table=11
NC_017154.1	RefSeq	gene	4525577	4526536	.	+	.	ID=gene4162;Name=YPD4_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20870;old_locus_tag=YPD4_3541
NC_017154.1	Protein Homology	CDS	4525577	4526536	.	+	0	ID=cds4068;Parent=gene4162;Dbxref=Genbank:WP_002209582.1;Name=WP_002209582.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002209582.1;transl_table=11
NC_017154.1	RefSeq	gene	4526526	4527533	.	+	.	ID=gene4163;Name=YPD4_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20875;old_locus_tag=YPD4_3542
NC_017154.1	Protein Homology	CDS	4526526	4527533	.	+	0	ID=cds4069;Parent=gene4163;Dbxref=Genbank:WP_002209583.1;Name=WP_002209583.1;gbkey=CDS;product=enterobactin ABC transporter permease;protein_id=WP_002209583.1;transl_table=11
NC_017154.1	RefSeq	gene	4527530	4528288	.	+	.	ID=gene4164;Name=YPD4_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20880;old_locus_tag=YPD4_3543
NC_017154.1	Protein Homology	CDS	4527530	4528288	.	+	0	ID=cds4070;Parent=gene4164;Dbxref=Genbank:WP_002209584.1;Name=WP_002209584.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002209584.1;transl_table=11
NC_017154.1	RefSeq	gene	4528285	4528785	.	-	.	ID=gene4165;Name=YPD4_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20885;old_locus_tag=YPD4_3544
NC_017154.1	Protein Homology	CDS	4528285	4528785	.	-	0	ID=cds4071;Parent=gene4165;Dbxref=Genbank:WP_002214364.1;Name=WP_002214364.1;gbkey=CDS;product=toxin Fic;protein_id=WP_002214364.1;transl_table=11
NC_017154.1	RefSeq	gene	4529021	4529206	.	-	.	ID=gene4166;Name=YPD4_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20890
NC_017154.1	Protein Homology	CDS	4529021	4529206	.	-	0	ID=cds4072;Parent=gene4166;Dbxref=Genbank:WP_002214362.1;Name=WP_002214362.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214362.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4529593	4529848	.	+	.	ID=id360;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4530218	4530580	.	+	.	ID=gene4167;Name=YPD4_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20895;old_locus_tag=YPD4_3545
NC_017154.1	Protein Homology	CDS	4530218	4530580	.	+	0	ID=cds4073;Parent=gene4167;Dbxref=Genbank:WP_002209585.1;Name=WP_002209585.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209585.1;transl_table=11
NC_017154.1	RefSeq	gene	4530773	4531258	.	+	.	ID=gene4168;Name=YPD4_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20900
NC_017154.1	Protein Homology	CDS	4530773	4531258	.	+	0	ID=cds4074;Parent=gene4168;Dbxref=Genbank:WP_002214360.1;Name=WP_002214360.1;gbkey=CDS;product=transposase;protein_id=WP_002214360.1;transl_table=11
NC_017154.1	RefSeq	gene	4531258	4531551	.	+	.	ID=gene4169;Name=YPD4_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20905
NC_017154.1	Protein Homology	CDS	4531258	4531551	.	+	0	ID=cds4075;Parent=gene4169;Dbxref=Genbank:WP_002361323.1;Name=WP_002361323.1;gbkey=CDS;product=transposase;protein_id=WP_002361323.1;transl_table=11
NC_017154.1	RefSeq	gene	4531725	4531970	.	+	.	ID=gene4170;Name=YPD4_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20910
NC_017154.1	Protein Homology	CDS	4531725	4531970	.	+	0	ID=cds4076;Parent=gene4170;Dbxref=Genbank:WP_002214358.1;Name=WP_002214358.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214358.1;transl_table=11
NC_017154.1	RefSeq	gene	4532238	4533617	.	-	.	ID=gene4171;Name=YPD4_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20915;old_locus_tag=YPD4_3546
NC_017154.1	Protein Homology	CDS	4532238	4533617	.	-	0	ID=cds4077;Parent=gene4171;Dbxref=Genbank:WP_002209586.1;Name=WP_002209586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209586.1;transl_table=11
NC_017154.1	RefSeq	gene	4533604	4534797	.	-	.	ID=gene4172;Name=YPD4_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20920;old_locus_tag=YPD4_3547
NC_017154.1	Protein Homology	CDS	4533604	4534797	.	-	0	ID=cds4078;Parent=gene4172;Dbxref=Genbank:WP_002209587.1;Name=WP_002209587.1;gbkey=CDS;product=integrase;protein_id=WP_002209587.1;transl_table=11
NC_017154.1	RefSeq	gene	4535183	4536376	.	-	.	ID=gene4173;Name=YPD4_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20925;old_locus_tag=YPD4_3548
NC_017154.1	Protein Homology	CDS	4535183	4536376	.	-	0	ID=cds4079;Parent=gene4173;Dbxref=Genbank:WP_002209588.1;Name=WP_002209588.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209588.1;transl_table=11
NC_017154.1	RefSeq	gene	4536466	4537650	.	-	.	ID=gene4174;Name=YPD4_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20930;old_locus_tag=YPD4_3549
NC_017154.1	Protein Homology	CDS	4536466	4537650	.	-	0	ID=cds4080;Parent=gene4174;Dbxref=Genbank:WP_002209589.1;Name=WP_002209589.1;gbkey=CDS;product=xylose ABC transporter permease;protein_id=WP_002209589.1;transl_table=11
NC_017154.1	RefSeq	gene	4537637	4539169	.	-	.	ID=gene4175;Name=YPD4_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20935;old_locus_tag=YPD4_3550
NC_017154.1	Protein Homology	CDS	4537637	4539169	.	-	0	ID=cds4081;Parent=gene4175;Dbxref=Genbank:WP_002209590.1;Name=WP_002209590.1;Note=with XylFH is part of the high affinity xylose ABC transporter;gbkey=CDS;product=xylose import ATP-binding protein XylG;protein_id=WP_002209590.1;transl_table=11
NC_017154.1	RefSeq	gene	4539377	4540372	.	-	.	ID=gene4176;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=YPD4_RS20940;old_locus_tag=YPD4_3551
NC_017154.1	Protein Homology	CDS	4539377	4540372	.	-	0	ID=cds4082;Parent=gene4176;Dbxref=Genbank:WP_002209591.1;Name=WP_002209591.1;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;gbkey=CDS;gene=xylF;product=xylose ABC transporter substrate-binding protein;protein_id=WP_002209591.1;transl_table=11
NC_017154.1	RefSeq	gene	4540835	4542154	.	+	.	ID=gene4177;Name=YPD4_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20945;old_locus_tag=YPD4_3552
NC_017154.1	Protein Homology	CDS	4540835	4542154	.	+	0	ID=cds4083;Parent=gene4177;Dbxref=Genbank:WP_002209593.1;Name=WP_002209593.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;product=xylose isomerase;protein_id=WP_002209593.1;transl_table=11
NC_017154.1	RefSeq	gene	4542278	4543732	.	+	.	ID=gene4178;Name=YPD4_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20950;old_locus_tag=YPD4_3553
NC_017154.1	Protein Homology	CDS	4542278	4543732	.	+	0	ID=cds4084;Parent=gene4178;Dbxref=Genbank:WP_002209594.1;Name=WP_002209594.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;gbkey=CDS;product=xylulokinase;protein_id=WP_002209594.1;transl_table=11
NC_017154.1	RefSeq	gene	4543850	4544836	.	-	.	ID=gene4179;Name=YPD4_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20955;old_locus_tag=YPD4_3554
NC_017154.1	Protein Homology	CDS	4543850	4544836	.	-	0	ID=cds4085;Parent=gene4179;Dbxref=Genbank:WP_002209595.1;Name=WP_002209595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209595.1;transl_table=11
NC_017154.1	RefSeq	gene	4544875	4545642	.	-	.	ID=gene4180;Name=YPD4_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20960;old_locus_tag=YPD4_3555
NC_017154.1	Protein Homology	CDS	4544875	4545642	.	-	0	ID=cds4086;Parent=gene4180;Dbxref=Genbank:WP_002209596.1;Name=WP_002209596.1;gbkey=CDS;product=fimbrial chaperone protein StdC;protein_id=WP_002209596.1;transl_table=11
NC_017154.1	RefSeq	gene	4545735	4548225	.	-	.	ID=gene4181;Name=YPD4_RS20970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS20970;old_locus_tag=YPD4_3557;pseudo=true
NC_017154.1	Protein Homology	CDS	4545735	4548225	.	-	0	ID=cds4087;Parent=gene4181;exception=annotated by transcript or proteomic data;gbkey=CDS;product=fimbrial protein;pseudo=true;transl_except=(pos:complement(4546383..4546385)%2Caa:Other);transl_table=11
NC_017154.1	RefSeq	gene	4548301	4548858	.	-	.	ID=gene4182;Name=YPD4_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20975;old_locus_tag=YPD4_3558
NC_017154.1	Protein Homology	CDS	4548301	4548858	.	-	0	ID=cds4088;Parent=gene4182;Dbxref=Genbank:WP_002209597.1;Name=WP_002209597.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209597.1;transl_table=11
NC_017154.1	RefSeq	gene	4549740	4550732	.	-	.	ID=gene4183;Name=YPD4_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20980;old_locus_tag=YPD4_3559
NC_017154.1	Protein Homology	CDS	4549740	4550732	.	-	0	ID=cds4089;Parent=gene4183;Dbxref=Genbank:WP_002209600.1;Name=WP_002209600.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;product=O-acetyltransferase;protein_id=WP_002209600.1;transl_table=11
NC_017154.1	RefSeq	gene	4550729	4550929	.	-	.	ID=gene4184;Name=YPD4_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20985
NC_017154.1	Protein Homology	CDS	4550729	4550929	.	-	0	ID=cds4090;Parent=gene4184;Dbxref=Genbank:WP_002209601.1;Name=WP_002209601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209601.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4550964	4552696	.	+	.	ID=id361;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4551095	4551610	.	+	.	ID=gene4185;Name=YPD4_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20990
NC_017154.1	Protein Homology	CDS	4551095	4551610	.	+	0	ID=cds4091;Parent=gene4185;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11
NC_017154.1	RefSeq	gene	4551664	4552449	.	+	.	ID=gene4186;Name=YPD4_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS20995;old_locus_tag=YPD4_3561
NC_017154.1	Protein Homology	CDS	4551664	4552449	.	+	0	ID=cds4092;Parent=gene4186;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11
NC_017154.1	RefSeq	gene	4552922	4554151	.	+	.	ID=gene4187;Name=YPD4_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21000;old_locus_tag=YPD4_3562
NC_017154.1	Protein Homology	CDS	4552922	4554151	.	+	0	ID=cds4093;Parent=gene4187;Dbxref=Genbank:WP_002215753.1;Name=WP_002215753.1;gbkey=CDS;product=multidrug transporter MdfA;protein_id=WP_002215753.1;transl_table=11
NC_017154.1	RefSeq	gene	4554300	4554503	.	-	.	ID=gene4188;Name=YPD4_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21005
NC_017154.1	Protein Homology	CDS	4554300	4554503	.	-	0	ID=cds4094;Parent=gene4188;Dbxref=Genbank:WP_002209605.1;Name=WP_002209605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209605.1;transl_table=11
NC_017154.1	RefSeq	gene	4554624	4554782	.	+	.	ID=gene4189;Name=YPD4_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21010
NC_017154.1	Protein Homology	CDS	4554624	4554782	.	+	0	ID=cds4095;Parent=gene4189;Dbxref=Genbank:WP_002215752.1;Name=WP_002215752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215752.1;transl_table=11
NC_017154.1	RefSeq	gene	4554861	4555442	.	+	.	ID=gene4190;Name=YPD4_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21015;old_locus_tag=YPD4_3563
NC_017154.1	Protein Homology	CDS	4554861	4555442	.	+	0	ID=cds4096;Parent=gene4190;Dbxref=Genbank:WP_002215751.1;Name=WP_002215751.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215751.1;transl_table=11
NC_017154.1	RefSeq	gene	4555456	4555788	.	-	.	ID=gene4191;Name=YPD4_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21020;old_locus_tag=YPD4_3564
NC_017154.1	Protein Homology	CDS	4555456	4555788	.	-	0	ID=cds4097;Parent=gene4191;Dbxref=Genbank:WP_002215750.1;Name=WP_002215750.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215750.1;transl_table=11
NC_017154.1	RefSeq	gene	4556077	4556541	.	+	.	ID=gene4192;Name=YPD4_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21025;old_locus_tag=YPD4_3565
NC_017154.1	Protein Homology	CDS	4556077	4556541	.	+	0	ID=cds4098;Parent=gene4192;Dbxref=Genbank:WP_002209607.1;Name=WP_002209607.1;gbkey=CDS;product=transposase;protein_id=WP_002209607.1;transl_table=11
NC_017154.1	RefSeq	gene	4556548	4558500	.	-	.	ID=gene4193;Name=YPD4_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21030;old_locus_tag=YPD4_3566
NC_017154.1	Protein Homology	CDS	4556548	4558500	.	-	0	ID=cds4099;Parent=gene4193;Dbxref=Genbank:WP_002223796.1;Name=WP_002223796.1;gbkey=CDS;product=selenocysteine-specific translation elongation factor;protein_id=WP_002223796.1;transl_table=11
NC_017154.1	RefSeq	gene	4558497	4559885	.	-	.	ID=gene4194;Name=YPD4_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21035;old_locus_tag=YPD4_3567
NC_017154.1	Protein Homology	CDS	4558497	4559885	.	-	0	ID=cds4100;Parent=gene4194;Dbxref=Genbank:WP_002209608.1;Name=WP_002209608.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_002209608.1;transl_table=11
NC_017154.1	RefSeq	gene	4560069	4560998	.	-	.	ID=gene4195;Name=YPD4_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21040;old_locus_tag=YPD4_3568
NC_017154.1	Protein Homology	CDS	4560069	4560998	.	-	0	ID=cds4101;Parent=gene4195;Dbxref=Genbank:WP_002209609.1;Name=WP_002209609.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;product=protein FdhE;protein_id=WP_002209609.1;transl_table=11
NC_017154.1	RefSeq	gene	4560998	4561672	.	-	.	ID=gene4196;Name=YPD4_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21045;old_locus_tag=YPD4_3569
NC_017154.1	Protein Homology	CDS	4560998	4561672	.	-	0	ID=cds4102;Parent=gene4196;Dbxref=Genbank:WP_002209610.1;Name=WP_002209610.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase-N subunit gamma;protein_id=WP_002209610.1;transl_table=11
NC_017154.1	RefSeq	gene	4561669	4562640	.	-	.	ID=gene4197;Name=YPD4_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21050;old_locus_tag=YPD4_3570
NC_017154.1	Protein Homology	CDS	4561669	4562640	.	-	0	ID=cds4103;Parent=gene4197;Dbxref=Genbank:WP_002209611.1;Name=WP_002209611.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase-N subunit beta;protein_id=WP_002209611.1;transl_table=11
NC_017154.1	RefSeq	gene	4562653	4565064	.	-	.	ID=gene4198;Name=YPD4_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21055;old_locus_tag=YPD4_3571
NC_017154.1	Protein Homology	CDS	4562653	4565064	.	-	0	ID=cds4104;Parent=gene4198;Dbxref=Genbank:WP_002231683.1;Name=WP_002231683.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_002231683.1;transl_table=11
NC_017154.1	RefSeq	gene	4565113	4565700	.	-	.	ID=gene4199;Name=YPD4_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21060;old_locus_tag=YPD4_3572
NC_017154.1	Protein Homology	CDS	4565113	4565700	.	-	0	ID=cds4105;Parent=gene4199;Dbxref=Genbank:WP_002231685.1;Name=WP_002231685.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002231685.1;transl_table=11
NC_017154.1	RefSeq	gene	4565897	4566721	.	+	.	ID=gene4200;Name=YPD4_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21065;old_locus_tag=YPD4_3573
NC_017154.1	Protein Homology	CDS	4565897	4566721	.	+	0	ID=cds4106;Parent=gene4200;Dbxref=Genbank:WP_002209612.1;Name=WP_002209612.1;gbkey=CDS;product=protein FdhD;protein_id=WP_002209612.1;transl_table=11
NC_017154.1	RefSeq	gene	4567157	4567780	.	+	.	ID=gene4201;Name=YPD4_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21070;old_locus_tag=YPD4_3574
NC_017154.1	Protein Homology	CDS	4567157	4567780	.	+	0	ID=cds4107;Parent=gene4201;Dbxref=Genbank:WP_002209614.1;Name=WP_002209614.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002209614.1;transl_table=11
NC_017154.1	RefSeq	gene	4568124	4570073	.	+	.	ID=gene4202;Name=YPD4_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21075;old_locus_tag=YPD4_3575
NC_017154.1	Protein Homology	CDS	4568124	4570073	.	+	0	ID=cds4108;Parent=gene4202;Dbxref=Genbank:WP_002209615.1;Name=WP_002209615.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002209615.1;transl_table=11
NC_017154.1	RefSeq	gene	4570263	4570595	.	+	.	ID=gene4203;Name=YPD4_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21080;old_locus_tag=YPD4_3576
NC_017154.1	Protein Homology	CDS	4570263	4570595	.	+	0	ID=cds4109;Parent=gene4203;Dbxref=Genbank:WP_002217114.1;Name=WP_002217114.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217114.1;transl_table=11
NC_017154.1	RefSeq	gene	4571127	4571603	.	+	.	ID=gene4204;Name=YPD4_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21085;old_locus_tag=YPD4_3577
NC_017154.1	Protein Homology	CDS	4571127	4571603	.	+	0	ID=cds4110;Parent=gene4204;Dbxref=Genbank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209617.1;transl_table=11
NC_017154.1	RefSeq	gene	4571772	4572128	.	-	.	ID=gene4205;Name=YPD4_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21090;old_locus_tag=YPD4_3578
NC_017154.1	Protein Homology	CDS	4571772	4572128	.	-	0	ID=cds4111;Parent=gene4205;Dbxref=Genbank:WP_002209618.1;Name=WP_002209618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209618.1;transl_table=11
NC_017154.1	RefSeq	gene	4572377	4572931	.	-	.	ID=gene4206;Name=YPD4_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21095;old_locus_tag=YPD4_3579
NC_017154.1	Protein Homology	CDS	4572377	4572931	.	-	0	ID=cds4112;Parent=gene4206;Dbxref=Genbank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;product=mannitol repressor protein;protein_id=WP_002209619.1;transl_table=11
NC_017154.1	RefSeq	gene	4573138	4574301	.	-	.	ID=gene4207;Name=YPD4_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21100;old_locus_tag=YPD4_3580
NC_017154.1	Protein Homology	CDS	4573138	4574301	.	-	0	ID=cds4113;Parent=gene4207;Dbxref=Genbank:WP_002209620.1;Name=WP_002209620.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_002209620.1;transl_table=11
NC_017154.1	RefSeq	gene	4574438	4576368	.	-	.	ID=gene4208;Name=YPD4_RS21105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS21105;pseudo=true
NC_017154.1	Protein Homology	CDS	4574438	4576368	.	-	0	ID=cds4114;Parent=gene4208;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;exception=annotated by transcript or proteomic data;gbkey=CDS;product=PTS mannitol transporter subunit IICBA;pseudo=true;transl_table=11
NC_017154.1	RefSeq	repeat_region	4576810	4576984	.	+	.	ID=id362;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4577018	4577737	.	-	.	ID=gene4209;Name=YPD4_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21110;old_locus_tag=YPD4_3583
NC_017154.1	Protein Homology	CDS	4577018	4577737	.	-	0	ID=cds4115;Parent=gene4209;Dbxref=Genbank:WP_002209622.1;Name=WP_002209622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209622.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4577989	4578163	.	+	.	ID=id363;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4578210	4580279	.	-	.	ID=gene4210;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=YPD4_RS21115;old_locus_tag=YPD4_3584
NC_017154.1	Protein Homology	CDS	4578210	4580279	.	-	0	ID=cds4116;Parent=gene4210;Dbxref=Genbank:WP_002209623.1;Name=WP_002209623.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11
NC_017154.1	RefSeq	gene	4580289	4581203	.	-	.	ID=gene4211;Name=YPD4_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21120;old_locus_tag=YPD4_3585
NC_017154.1	Protein Homology	CDS	4580289	4581203	.	-	0	ID=cds4117;Parent=gene4211;Dbxref=Genbank:WP_002209624.1;Name=WP_002209624.1;gbkey=CDS;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11
NC_017154.1	RefSeq	gene	4581531	4582104	.	+	.	ID=gene4212;Name=YPD4_RS21125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS21125;old_locus_tag=YPD4_3586;pseudo=true
NC_017154.1	Protein Homology	CDS	4581531	4582104	.	+	0	ID=cds4118;Parent=gene4212;exception=annotated by transcript or proteomic data;gbkey=CDS;product=DNA-3-methyladenine glycosidase;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4582101	4582556	.	+	.	ID=gene4213;Name=YPD4_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21130;old_locus_tag=YPD4_3587
NC_017154.1	Protein Homology	CDS	4582101	4582556	.	+	0	ID=cds4119;Parent=gene4213;Dbxref=Genbank:WP_002209627.1;Name=WP_002209627.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209627.1;transl_table=11
NC_017154.1	RefSeq	gene	4582914	4583573	.	+	.	ID=gene4214;Name=YPD4_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21135;old_locus_tag=YPD4_3588
NC_017154.1	Protein Homology	CDS	4582914	4583573	.	+	0	ID=cds4120;Parent=gene4214;Dbxref=Genbank:WP_002209628.1;Name=WP_002209628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209628.1;transl_table=11
NC_017154.1	RefSeq	gene	4583704	4584348	.	-	.	ID=gene4215;Name=YPD4_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21140;old_locus_tag=YPD4_3589
NC_017154.1	Protein Homology	CDS	4583704	4584348	.	-	0	ID=cds4121;Parent=gene4215;Dbxref=Genbank:WP_002209629.1;Name=WP_002209629.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209629.1;transl_table=11
NC_017154.1	RefSeq	gene	4584867	4585847	.	+	.	ID=gene4216;Name=YPD4_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21145;old_locus_tag=YPD4_3590
NC_017154.1	Protein Homology	CDS	4584867	4585847	.	+	0	ID=cds4122;Parent=gene4216;Dbxref=Genbank:WP_002209630.1;Name=WP_002209630.1;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;gbkey=CDS;product=glyoxylate/hydroxypyruvate reductase B;protein_id=WP_002209630.1;transl_table=11
NC_017154.1	RefSeq	gene	4586136	4588199	.	+	.	ID=gene4217;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=YPD4_RS21150;old_locus_tag=YPD4_3591
NC_017154.1	Protein Homology	CDS	4586136	4588199	.	+	0	ID=cds4123;Parent=gene4217;Dbxref=Genbank:WP_002209631.1;Name=WP_002209631.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=WP_002209631.1;transl_table=11
NC_017154.1	RefSeq	gene	4588614	4589057	.	+	.	ID=gene4218;Name=YPD4_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21155;old_locus_tag=YPD4_3592
NC_017154.1	Protein Homology	CDS	4588614	4589057	.	+	0	ID=cds4124;Parent=gene4218;Dbxref=Genbank:WP_002209632.1;Name=WP_002209632.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209632.1;transl_table=11
NC_017154.1	RefSeq	gene	4589512	4590777	.	+	.	ID=gene4219;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=YPD4_RS21160;old_locus_tag=YPD4_3593
NC_017154.1	Protein Homology	CDS	4589512	4590777	.	+	0	ID=cds4125;Parent=gene4219;Dbxref=Genbank:WP_002228155.1;Name=WP_002228155.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=WP_002228155.1;transl_table=11
NC_017154.1	RefSeq	gene	4590890	4592548	.	-	.	ID=gene4220;Name=YPD4_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21165;old_locus_tag=YPD4_3594
NC_017154.1	Protein Homology	CDS	4590890	4592548	.	-	0	ID=cds4126;Parent=gene4220;Dbxref=Genbank:WP_002209634.1;Name=WP_002209634.1;gbkey=CDS;product=transporter;protein_id=WP_002209634.1;transl_table=11
NC_017154.1	RefSeq	gene	4592921	4593385	.	-	.	ID=gene4221;Name=YPD4_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21170;old_locus_tag=YPD4_3595
NC_017154.1	Protein Homology	CDS	4592921	4593385	.	-	0	ID=cds4127;Parent=gene4221;Dbxref=Genbank:WP_002209635.1;Name=WP_002209635.1;gbkey=CDS;product=heat-shock protein IbpB;protein_id=WP_002209635.1;transl_table=11
NC_017154.1	RefSeq	gene	4593666	4594079	.	-	.	ID=gene4222;Name=YPD4_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21175;old_locus_tag=YPD4_3596
NC_017154.1	Protein Homology	CDS	4593666	4594079	.	-	0	ID=cds4128;Parent=gene4222;Dbxref=Genbank:WP_002209636.1;Name=WP_002209636.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_002209636.1;transl_table=11
NC_017154.1	RefSeq	gene	4594447	4594785	.	+	.	ID=gene4223;Name=YPD4_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21180;old_locus_tag=YPD4_3597
NC_017154.1	Protein Homology	CDS	4594447	4594785	.	+	0	ID=cds4129;Parent=gene4223;Dbxref=Genbank:WP_002209637.1;Name=WP_002209637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209637.1;transl_table=11
NC_017154.1	RefSeq	gene	4594825	4595139	.	-	.	ID=gene4224;Name=YPD4_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21185;old_locus_tag=YPD4_3598
NC_017154.1	Protein Homology	CDS	4594825	4595139	.	-	0	ID=cds4130;Parent=gene4224;Dbxref=Genbank:WP_002228733.1;Name=WP_002228733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228733.1;transl_table=11
NC_017154.1	RefSeq	gene	4595129	4595440	.	-	.	ID=gene4225;Name=YPD4_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21190;old_locus_tag=YPD4_3599
NC_017154.1	Protein Homology	CDS	4595129	4595440	.	-	0	ID=cds4131;Parent=gene4225;Dbxref=Genbank:WP_002228734.1;Name=WP_002228734.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228734.1;transl_table=11
NC_017154.1	RefSeq	gene	4595648	4596610	.	+	.	ID=gene4226;Name=YPD4_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21195;old_locus_tag=YPD4_3600
NC_017154.1	Protein Homology	CDS	4595648	4596610	.	+	0	ID=cds4132;Parent=gene4226;Dbxref=Genbank:WP_002209638.1;Name=WP_002209638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209638.1;transl_table=11
NC_017154.1	RefSeq	gene	4596604	4597557	.	+	.	ID=gene4227;Name=YPD4_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21200;old_locus_tag=YPD4_3601
NC_017154.1	Protein Homology	CDS	4596604	4597557	.	+	0	ID=cds4133;Parent=gene4227;Dbxref=Genbank:WP_002209639.1;Name=WP_002209639.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=WP_002209639.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4597604	4599392	.	+	.	ID=id364;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4597764	4598279	.	+	.	ID=gene4228;Name=YPD4_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21205
NC_017154.1	Protein Homology	CDS	4597764	4598279	.	+	0	ID=cds4134;Parent=gene4228;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11
NC_017154.1	RefSeq	gene	4598333	4599118	.	+	.	ID=gene4229;Name=YPD4_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21210;old_locus_tag=YPD4_3603
NC_017154.1	Protein Homology	CDS	4598333	4599118	.	+	0	ID=cds4135;Parent=gene4229;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11
NC_017154.1	RefSeq	gene	4599509	4600318	.	-	.	ID=gene4230;Name=YPD4_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21215;old_locus_tag=YPD4_3604
NC_017154.1	Protein Homology	CDS	4599509	4600318	.	-	0	ID=cds4136;Parent=gene4230;Dbxref=Genbank:WP_002209641.1;Name=WP_002209641.1;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;gbkey=CDS;product=sugar phosphate phosphatase;protein_id=WP_002209641.1;transl_table=11
NC_017154.1	RefSeq	gene	4600534	4602948	.	-	.	ID=gene4231;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=YPD4_RS21220;old_locus_tag=YPD4_3605
NC_017154.1	Protein Homology	CDS	4600534	4602948	.	-	0	ID=cds4137;Parent=gene4231;Dbxref=Genbank:WP_002209642.1;Name=WP_002209642.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_002209642.1;transl_table=11
NC_017154.1	RefSeq	gene	4602968	4604053	.	-	.	ID=gene4232;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=YPD4_RS21225;old_locus_tag=YPD4_3606
NC_017154.1	Protein Homology	CDS	4602968	4604053	.	-	0	ID=cds4138;Parent=gene4232;Dbxref=Genbank:WP_002209643.1;Name=WP_002209643.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=DNA recombination protein RecF;protein_id=WP_002209643.1;transl_table=11
NC_017154.1	RefSeq	gene	4604052	4604222	.	+	.	ID=gene4233;Name=YPD4_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21230
NC_017154.1	Protein Homology	CDS	4604052	4604222	.	+	0	ID=cds4139;Parent=gene4233;Dbxref=Genbank:WP_002218418.1;Name=WP_002218418.1;gbkey=CDS;product=recombinase F;protein_id=WP_002218418.1;transl_table=11
NC_017154.1	RefSeq	gene	4604226	4605326	.	-	.	ID=gene4234;Name=YPD4_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21235;old_locus_tag=YPD4_3607
NC_017154.1	Protein Homology	CDS	4604226	4605326	.	-	0	ID=cds4140;Parent=gene4234;Dbxref=Genbank:WP_002209645.1;Name=WP_002209645.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_002209645.1;transl_table=11
NC_017154.1	RefSeq	gene	4605331	4606721	.	-	.	ID=gene4235;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=pseudogene;locus_tag=YPD4_RS21240;pseudo=true
NC_017154.1	Protein Homology	CDS	4605331	4606721	.	-	0	ID=cds4141;Parent=gene4235;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=dnaA;product=chromosomal replication initiation protein;pseudo=true;transl_table=11
NC_017154.1	RefSeq	gene	4607431	4607571	.	+	.	ID=gene4236;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=YPD4_RS21245
NC_017154.1	Protein Homology	CDS	4607431	4607571	.	+	0	ID=cds4142;Parent=gene4236;Dbxref=Genbank:WP_002220736.1;Name=WP_002220736.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11
NC_017154.1	RefSeq	gene	4607590	4607949	.	+	.	ID=gene4237;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=YPD4_RS21250
NC_017154.1	Protein Homology	CDS	4607590	4607949	.	+	0	ID=cds4143;Parent=gene4237;Dbxref=Genbank:WP_002228153.1;Name=WP_002228153.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_002228153.1;transl_table=11
NC_017154.1	RefSeq	gene	4608173	4609813	.	+	.	ID=gene4238;Name=YPD4_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21255;old_locus_tag=YPD4_3610
NC_017154.1	Protein Homology	CDS	4608173	4609813	.	+	0	ID=cds4144;Parent=gene4238;Dbxref=Genbank:WP_002220739.1;Name=WP_002220739.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=protein translocase component YidC;protein_id=WP_002220739.1;transl_table=11
NC_017154.1	RefSeq	gene	4609956	4611320	.	+	.	ID=gene4239;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=YPD4_RS21260;old_locus_tag=YPD4_3611
NC_017154.1	Protein Homology	CDS	4609956	4611320	.	+	0	ID=cds4145;Parent=gene4239;Dbxref=Genbank:WP_002220740.1;Name=WP_002220740.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase MnmE;protein_id=WP_002220740.1;transl_table=11
NC_017154.1	RefSeq	gene	4611506	4612705	.	+	.	ID=gene4240;Name=YPD4_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21265;old_locus_tag=YPD4_3612
NC_017154.1	Protein Homology	CDS	4611506	4612705	.	+	0	ID=cds4146;Parent=gene4240;Dbxref=Genbank:WP_002215588.1;Name=WP_002215588.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=WP_002215588.1;transl_table=11
NC_017154.1	RefSeq	gene	4613173	4613454	.	-	.	ID=gene4241;Name=YPD4_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21270
NC_017154.1	Protein Homology	CDS	4613173	4613454	.	-	0	ID=cds4147;Parent=gene4241;Dbxref=Genbank:WP_002215583.1;Name=WP_002215583.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215583.1;transl_table=11
NC_017154.1	RefSeq	gene	4613516	4614136	.	-	.	ID=gene4242;Name=YPD4_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21275;old_locus_tag=YPD4_3613
NC_017154.1	Protein Homology	CDS	4613516	4614136	.	-	0	ID=cds4148;Parent=gene4242;Dbxref=Genbank:WP_002215581.1;Name=WP_002215581.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215581.1;transl_table=11
NC_017154.1	RefSeq	gene	4614681	4616009	.	-	.	ID=gene4243;Name=YPD4_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21280;old_locus_tag=YPD4_3614
NC_017154.1	Protein Homology	CDS	4614681	4616009	.	-	0	ID=cds4149;Parent=gene4243;Dbxref=Genbank:WP_002215577.1;Name=WP_002215577.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease;protein_id=WP_002215577.1;transl_table=11
NC_017154.1	RefSeq	repeat_region	4616228	4616400	.	+	.	ID=id365;gbkey=repeat_region
NC_017154.1	RefSeq	gene	4616502	4617170	.	+	.	ID=gene4244;Name=YPD4_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21285;old_locus_tag=YPD4_3615
NC_017154.1	Protein Homology	CDS	4616502	4617170	.	+	0	ID=cds4150;Parent=gene4244;Dbxref=Genbank:WP_002215575.1;Name=WP_002215575.1;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_002215575.1;transl_table=11
NC_017154.1	RefSeq	gene	4617205	4617960	.	-	.	ID=gene4245;Name=YPD4_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21290;old_locus_tag=YPD4_3616
NC_017154.1	Protein Homology	CDS	4617205	4617960	.	-	0	ID=cds4151;Parent=gene4245;Dbxref=Genbank:WP_002215573.1;Name=WP_002215573.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215573.1;transl_table=11
NC_017154.1	RefSeq	gene	4617962	4618699	.	-	.	ID=gene4246;Name=YPD4_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21295;old_locus_tag=YPD4_3617
NC_017154.1	Protein Homology	CDS	4617962	4618699	.	-	0	ID=cds4152;Parent=gene4246;Dbxref=Genbank:WP_002215571.1;Name=WP_002215571.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215571.1;transl_table=11
NC_017154.1	RefSeq	gene	4618882	4619736	.	-	.	ID=gene4247;Name=YPD4_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21300;old_locus_tag=YPD4_3618
NC_017154.1	Protein Homology	CDS	4618882	4619736	.	-	0	ID=cds4153;Parent=gene4247;Dbxref=Genbank:WP_002215568.1;Name=WP_002215568.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002215568.1;transl_table=11
NC_017154.1	RefSeq	gene	4619956	4620627	.	-	.	ID=gene4248;Name=YPD4_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21305;old_locus_tag=YPD4_3619
NC_017154.1	Protein Homology	CDS	4619956	4620627	.	-	0	ID=cds4154;Parent=gene4248;Dbxref=Genbank:WP_002228151.1;Name=WP_002228151.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228151.1;transl_table=11
NC_017154.1	RefSeq	gene	4620923	4621645	.	-	.	ID=gene4249;Name=YPD4_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21310;old_locus_tag=YPD4_3620
NC_017154.1	Protein Homology	CDS	4620923	4621645	.	-	0	ID=cds4155;Parent=gene4249;Dbxref=Genbank:WP_002220747.1;Name=WP_002220747.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220747.1;transl_table=11
NC_017154.1	RefSeq	gene	4621733	4622509	.	-	.	ID=gene4250;Name=YPD4_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21315;old_locus_tag=YPD4_3621
NC_017154.1	Protein Homology	CDS	4621733	4622509	.	-	0	ID=cds4156;Parent=gene4250;Dbxref=Genbank:WP_002215562.1;Name=WP_002215562.1;gbkey=CDS;product=phosphate import ATP-binding protein PstB 2;protein_id=WP_002215562.1;transl_table=11
NC_017154.1	RefSeq	gene	4622590	4623477	.	-	.	ID=gene4251;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=YPD4_RS21320;old_locus_tag=YPD4_3622
NC_017154.1	Protein Homology	CDS	4622590	4623477	.	-	0	ID=cds4157;Parent=gene4251;Dbxref=Genbank:WP_002215560.1;Name=WP_002215560.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=WP_002215560.1;transl_table=11
NC_017154.1	RefSeq	gene	4623479	4624435	.	-	.	ID=gene4252;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=YPD4_RS21325;old_locus_tag=YPD4_3623
NC_017154.1	Protein Homology	CDS	4623479	4624435	.	-	0	ID=cds4158;Parent=gene4252;Dbxref=Genbank:WP_002215558.1;Name=WP_002215558.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate transporter permease subunit PstC;protein_id=WP_002215558.1;transl_table=11
NC_017154.1	RefSeq	gene	4624664	4625704	.	-	.	ID=gene4253;Name=YPD4_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21330;old_locus_tag=YPD4_3624
NC_017154.1	Protein Homology	CDS	4624664	4625704	.	-	0	ID=cds4159;Parent=gene4253;Dbxref=Genbank:WP_002215557.1;Name=WP_002215557.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215557.1;transl_table=11
NC_017154.1	RefSeq	gene	4626187	4628016	.	-	.	ID=gene4254;Name=YPD4_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21335;old_locus_tag=YPD4_3625
NC_017154.1	Protein Homology	CDS	4626187	4628016	.	-	0	ID=cds4160;Parent=gene4254;Dbxref=Genbank:WP_002215552.1;Name=WP_002215552.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glutamine--fructose-6-phosphate aminotransferase [isomerizing];protein_id=WP_002215552.1;transl_table=11
NC_017154.1	RefSeq	gene	4628217	4629587	.	-	.	ID=gene4255;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=YPD4_RS21340;old_locus_tag=YPD4_3626
NC_017154.1	Protein Homology	CDS	4628217	4629587	.	-	0	ID=cds4161;Parent=gene4255;Dbxref=Genbank:WP_002215550.1;Name=WP_002215550.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional protein GlmU;protein_id=WP_002215550.1;transl_table=11
NC_017154.1	RefSeq	gene	4630208	4630630	.	-	.	ID=gene4256;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=YPD4_RS21345;old_locus_tag=YPD4_3627
NC_017154.1	Protein Homology	CDS	4630208	4630630	.	-	0	ID=cds4162;Parent=gene4256;Dbxref=Genbank:WP_002215546.1;Name=WP_002215546.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase epsilon chain;protein_id=WP_002215546.1;transl_table=11
NC_017154.1	RefSeq	gene	4630652	4632034	.	-	.	ID=gene4257;Name=YPD4_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21350;old_locus_tag=YPD4_3628
NC_017154.1	Protein Homology	CDS	4630652	4632034	.	-	0	ID=cds4163;Parent=gene4257;Dbxref=Genbank:WP_002220753.1;Name=WP_002220753.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11
NC_017154.1	RefSeq	gene	4632190	4633053	.	-	.	ID=gene4258;Name=YPD4_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21355;old_locus_tag=YPD4_3629
NC_017154.1	Protein Homology	CDS	4632190	4633053	.	-	0	ID=cds4164;Parent=gene4258;Dbxref=Genbank:WP_002220756.1;Name=WP_002220756.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11
NC_017154.1	RefSeq	gene	4633115	4634656	.	-	.	ID=gene4259;Name=YPD4_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21360;old_locus_tag=YPD4_3630
NC_017154.1	Protein Homology	CDS	4633115	4634656	.	-	0	ID=cds4165;Parent=gene4259;Dbxref=Genbank:WP_002220758.1;Name=WP_002220758.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11
NC_017154.1	RefSeq	gene	4634671	4635204	.	-	.	ID=gene4260;Name=YPD4_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21365;old_locus_tag=YPD4_3631
NC_017154.1	Protein Homology	CDS	4634671	4635204	.	-	0	ID=cds4166;Parent=gene4260;Dbxref=Genbank:WP_002220760.1;Name=WP_002220760.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11
NC_017154.1	RefSeq	gene	4635219	4635689	.	-	.	ID=gene4261;Name=YPD4_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21370;old_locus_tag=YPD4_3632
NC_017154.1	Protein Homology	CDS	4635219	4635689	.	-	0	ID=cds4167;Parent=gene4261;Dbxref=Genbank:WP_002220762.1;Name=WP_002220762.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP synthase subunit b;protein_id=WP_002220762.1;transl_table=11
NC_017154.1	RefSeq	gene	4635751	4635990	.	-	.	ID=gene4262;Name=YPD4_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21375
NC_017154.1	Protein Homology	CDS	4635751	4635990	.	-	0	ID=cds4168;Parent=gene4262;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11
NC_017154.1	RefSeq	gene	4636040	4636864	.	-	.	ID=gene4263;Name=YPD4_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21380;old_locus_tag=YPD4_3633
NC_017154.1	Protein Homology	CDS	4636040	4636864	.	-	0	ID=cds4169;Parent=gene4263;Dbxref=Genbank:WP_002228150.1;Name=WP_002228150.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit a;protein_id=WP_002228150.1;transl_table=11
NC_017154.1	RefSeq	gene	4636904	4637287	.	-	.	ID=gene4264;Name=YPD4_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21385;old_locus_tag=YPD4_3634
NC_017154.1	Protein Homology	CDS	4636904	4637287	.	-	0	ID=cds4170;Parent=gene4264;Dbxref=Genbank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11
NC_017154.1	RefSeq	gene	4637954	4638574	.	-	.	ID=gene4265;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=YPD4_RS21390;old_locus_tag=YPD4_3635
NC_017154.1	Protein Homology	CDS	4637954	4638574	.	-	0	ID=cds4171;Parent=gene4265;Dbxref=Genbank:WP_002212261.1;Name=WP_002212261.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=ribosomal RNA small subunit methyltransferase G;protein_id=WP_002212261.1;transl_table=11
NC_017154.1	RefSeq	gene	4638720	4640609	.	-	.	ID=gene4266;Name=YPD4_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21395;old_locus_tag=YPD4_3636
NC_017154.1	Protein Homology	CDS	4638720	4640609	.	-	0	ID=cds4172;Parent=gene4266;Dbxref=Genbank:WP_002212259.1;Name=WP_002212259.1;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=WP_002212259.1;transl_table=11
##sequence-region NC_017153.1 1 68342
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=637382
NC_017153.1	RefSeq	region	1	68342	.	+	.	ID=id366;Dbxref=taxon:637382;Is_circular=true;Name=pCD1;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pCD1;strain=D106004
NC_017153.1	RefSeq	gene	67415	68587	.	-	.	ID=gene4267;Name=YPD4_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21840
NC_017153.1	Protein Homology	CDS	67415	68587	.	-	0	ID=cds4173;Parent=gene4267;Dbxref=Genbank:WP_002220893.1;Name=WP_002220893.1;gbkey=CDS;product=integrase;protein_id=WP_002220893.1;transl_table=11
NC_017153.1	RefSeq	gene	495	992	.	+	.	ID=gene4268;Name=YPD4_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21415;old_locus_tag=YPD4_pCD0001
NC_017153.1	Protein Homology	CDS	495	992	.	+	0	ID=cds4174;Parent=gene4268;Dbxref=Genbank:WP_002428538.1;Name=WP_002428538.1;gbkey=CDS;product=transposase;protein_id=WP_002428538.1;transl_table=11
NC_017153.1	RefSeq	gene	1055	1447	.	-	.	ID=gene4269;Name=YPD4_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21420;old_locus_tag=YPD4_pCD0002
NC_017153.1	Protein Homology	CDS	1055	1447	.	-	0	ID=cds4175;Parent=gene4269;Dbxref=Genbank:WP_002213403.1;Name=WP_002213403.1;gbkey=CDS;product=YopE regulator;protein_id=WP_002213403.1;transl_table=11
NC_017153.1	RefSeq	gene	1716	2300	.	+	.	ID=gene4270;Name=YPD4_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21425;old_locus_tag=YPD4_pCD0003
NC_017153.1	Protein Homology	CDS	1716	2300	.	+	0	ID=cds4176;Parent=gene4270;Dbxref=Genbank:WP_002353311.1;Name=WP_002353311.1;gbkey=CDS;product=virulence protein YopE;protein_id=WP_002353311.1;transl_table=11
NC_017153.1	RefSeq	gene	2440	2739	.	-	.	ID=gene4271;Name=YPD4_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21430;old_locus_tag=YPD4_pCD0004
NC_017153.1	Protein Homology	CDS	2440	2739	.	-	0	ID=cds4177;Parent=gene4271;Dbxref=Genbank:WP_002213360.1;Name=WP_002213360.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002213360.1;transl_table=11
NC_017153.1	RefSeq	gene	2732	2974	.	-	.	ID=gene4272;Name=YPD4_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21435
NC_017153.1	Protein Homology	CDS	2732	2974	.	-	0	ID=cds4178;Parent=gene4272;Dbxref=Genbank:WP_002224342.1;Name=WP_002224342.1;gbkey=CDS;product=antitoxin ParD;protein_id=WP_002224342.1;transl_table=11
NC_017153.1	RefSeq	gene	3820	4068	.	-	.	ID=gene4273;Name=YPD4_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21440
NC_017153.1	Protein Homology	CDS	3820	4068	.	-	0	ID=cds4179;Parent=gene4273;Dbxref=Genbank:WP_017204796.1;Name=WP_017204796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_017204796.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	3875	4108	.	+	.	ID=id367;gbkey=repeat_region
NC_017153.1	RefSeq	gene	4236	5201	.	-	.	ID=gene4274;Name=YPD4_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21445;old_locus_tag=YPD4_pCD0005
NC_017153.1	Protein Homology	CDS	4236	5201	.	-	0	ID=cds4180;Parent=gene4274;Dbxref=Genbank:WP_002213354.1;Name=WP_002213354.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002213354.1;transl_table=11
NC_017153.1	RefSeq	gene	5198	6364	.	-	.	ID=gene4275;Name=YPD4_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21450;old_locus_tag=YPD4_pCD0006
NC_017153.1	Protein Homology	CDS	5198	6364	.	-	0	ID=cds4181;Parent=gene4275;Dbxref=Genbank:WP_002220902.1;Name=WP_002220902.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002220902.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	7107	8341	.	+	.	ID=id368;gbkey=repeat_region
NC_017153.1	RefSeq	gene	7164	7358	.	-	.	ID=gene4276;Name=YPD4_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21455
NC_017153.1	Protein Homology	CDS	7164	7358	.	-	0	ID=cds4182;Parent=gene4276;Dbxref=Genbank:WP_002229766.1;Name=WP_002229766.1;gbkey=CDS;product=transposase;protein_id=WP_002229766.1;transl_table=11
NC_017153.1	RefSeq	gene	7470	7928	.	-	.	ID=gene4277;Name=YPD4_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21460;old_locus_tag=YPD4_pCD0007
NC_017153.1	Protein Homology	CDS	7470	7928	.	-	0	ID=cds4183;Parent=gene4277;Dbxref=Genbank:WP_002229768.1;Name=WP_002229768.1;gbkey=CDS;product=transposase;protein_id=WP_002229768.1;transl_table=11
NC_017153.1	RefSeq	gene	7952	8269	.	-	.	ID=gene4278;Name=YPD4_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21465;old_locus_tag=YPD4_pCD0008
NC_017153.1	Protein Homology	CDS	7952	8269	.	-	0	ID=cds4184;Parent=gene4278;Dbxref=Genbank:WP_002213008.1;Name=WP_002213008.1;gbkey=CDS;product=transposase;protein_id=WP_002213008.1;transl_table=11
NC_017153.1	RefSeq	gene	8376	8993	.	-	.	ID=gene4279;Name=YPD4_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21470;old_locus_tag=YPD4_pCD0009
NC_017153.1	Protein Homology	CDS	8376	8993	.	-	0	ID=cds4185;Parent=gene4279;Dbxref=Genbank:WP_002353315.1;Name=WP_002353315.1;gbkey=CDS;product=conjugal transfer protein TraT;protein_id=WP_002353315.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	9300	9445	.	+	.	ID=id369;gbkey=repeat_region
NC_017153.1	RefSeq	gene	9603	10151	.	-	.	ID=gene4280;Name=YPD4_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21475;old_locus_tag=YPD4_pCD0010
NC_017153.1	Protein Homology	CDS	9603	10151	.	-	0	ID=cds4186;Parent=gene4280;Dbxref=Genbank:WP_002213007.1;Name=WP_002213007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213007.1;transl_table=11
NC_017153.1	RefSeq	gene	10651	11619	.	+	.	ID=gene4281;Name=YPD4_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21480;old_locus_tag=YPD4_pCD0011
NC_017153.1	Protein Homology	CDS	10651	11619	.	+	0	ID=cds4187;Parent=gene4281;Dbxref=Genbank:WP_014462177.1;Name=WP_014462177.1;gbkey=CDS;product=cysteine protease;protein_id=WP_014462177.1;transl_table=11
NC_017153.1	RefSeq	gene	11619	12017	.	+	.	ID=gene4282;Name=YPD4_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21485;old_locus_tag=YPD4_pCD0012
NC_017153.1	Protein Homology	CDS	11619	12017	.	+	0	ID=cds4188;Parent=gene4282;Dbxref=Genbank:WP_002213004.1;Name=WP_002213004.1;gbkey=CDS;product=chaperone protein SycT;protein_id=WP_002213004.1;transl_table=11
NC_017153.1	RefSeq	gene	12061	12372	.	-	.	ID=gene4283;Name=YPD4_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21490;old_locus_tag=YPD4_pCD0013
NC_017153.1	Protein Homology	CDS	12061	12372	.	-	0	ID=cds4189;Parent=gene4283;Dbxref=Genbank:WP_002233188.1;Name=WP_002233188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002233188.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	12420	12759	.	+	.	ID=id370;gbkey=repeat_region
NC_017153.1	RefSeq	gene	12722	13141	.	+	.	ID=gene4284;Name=YPD4_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21495;old_locus_tag=YPD4_pCD0014
NC_017153.1	Protein Homology	CDS	12722	13141	.	+	0	ID=cds4190;Parent=gene4284;Dbxref=Genbank:WP_002222515.1;Name=WP_002222515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222515.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	13615	13888	.	+	.	ID=id371;gbkey=repeat_region
NC_017153.1	RefSeq	gene	14119	14334	.	+	.	ID=gene4285;Name=YPD4_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21500
NC_017153.1	Protein Homology	CDS	14119	14334	.	+	0	ID=cds4191;Parent=gene4285;Dbxref=Genbank:WP_002353323.1;Name=WP_002353323.1;gbkey=CDS;product=transposase;protein_id=WP_002353323.1;transl_table=11
NC_017153.1	RefSeq	gene	14377	15606	.	-	.	ID=gene4286;Name=YPD4_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21505;old_locus_tag=YPD4_pCD0015
NC_017153.1	Protein Homology	CDS	14377	15606	.	-	0	ID=cds4192;Parent=gene4286;Dbxref=Genbank:WP_002229779.1;Name=WP_002229779.1;gbkey=CDS;product=outer membrane protein YopM;protein_id=WP_002229779.1;transl_table=11
NC_017153.1	RefSeq	gene	16000	16209	.	-	.	ID=gene4287;Name=YPD4_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21510
NC_017153.1	Protein Homology	CDS	16000	16209	.	-	0	ID=cds4193;Parent=gene4287;Dbxref=Genbank:WP_002229781.1;Name=WP_002229781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229781.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	16643	16957	.	+	.	ID=id372;gbkey=repeat_region
NC_017153.1	RefSeq	gene	17335	18255	.	-	.	ID=gene4288;Name=YPD4_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21515;old_locus_tag=YPD4_pCD0017
NC_017153.1	Protein Homology	CDS	17335	18255	.	-	0	ID=cds4194;Parent=gene4288;Dbxref=Genbank:WP_002212987.1;Name=WP_002212987.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212987.1;transl_table=11
NC_017153.1	RefSeq	gene	18274	19479	.	-	.	ID=gene4289;Name=YPD4_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21520;old_locus_tag=YPD4_pCD0018
NC_017153.1	Protein Homology	CDS	18274	19479	.	-	0	ID=cds4195;Parent=gene4289;Dbxref=Genbank:WP_002212985.1;Name=WP_002212985.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212985.1;transl_table=11
NC_017153.1	RefSeq	gene	19457	19963	.	-	.	ID=gene4290;Name=YPD4_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21525;old_locus_tag=YPD4_pCD0019
NC_017153.1	Protein Homology	CDS	19457	19963	.	-	0	ID=cds4196;Parent=gene4290;Dbxref=Genbank:WP_002222758.1;Name=WP_002222758.1;gbkey=CDS;product=low calcium response locus protein H;protein_id=WP_002222758.1;transl_table=11
NC_017153.1	RefSeq	gene	19976	20956	.	-	.	ID=gene4291;Name=YPD4_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21530;old_locus_tag=YPD4_pCD0020
NC_017153.1	Protein Homology	CDS	19976	20956	.	-	0	ID=cds4197;Parent=gene4291;Dbxref=Genbank:WP_002212981.1;Name=WP_002212981.1;gbkey=CDS;product=Virulence-associated V antigen;protein_id=WP_002212981.1;transl_table=11
NC_017153.1	RefSeq	gene	20958	21245	.	-	.	ID=gene4292;Name=YPD4_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21535
NC_017153.1	Protein Homology	CDS	20958	21245	.	-	0	ID=cds4198;Parent=gene4292;Dbxref=Genbank:WP_002212973.1;Name=WP_002212973.1;gbkey=CDS;product=low calcium response locus protein G;protein_id=WP_002212973.1;transl_table=11
NC_017153.1	RefSeq	gene	21287	21727	.	-	.	ID=gene4293;Name=YPD4_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21540;old_locus_tag=YPD4_pCD0021
NC_017153.1	Protein Homology	CDS	21287	21727	.	-	0	ID=cds4199;Parent=gene4293;Dbxref=Genbank:WP_002220918.1;Name=WP_002220918.1;gbkey=CDS;product=low calcium response locus protein R;protein_id=WP_002220918.1;transl_table=11
NC_017153.1	RefSeq	gene	21724	23838	.	-	.	ID=gene4294;Name=YPD4_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21545;old_locus_tag=YPD4_pCD0022
NC_017153.1	Protein Homology	CDS	21724	23838	.	-	0	ID=cds4200;Parent=gene4294;Dbxref=Genbank:WP_002212971.1;Name=WP_002212971.1;gbkey=CDS;product=low calcium response locus protein D;protein_id=WP_002212971.1;transl_table=11
NC_017153.1	RefSeq	gene	23825	24163	.	-	.	ID=gene4295;Name=YPD4_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21550;old_locus_tag=YPD4_pCD0023
NC_017153.1	Protein Homology	CDS	23825	24163	.	-	0	ID=cds4201;Parent=gene4295;Dbxref=Genbank:WP_032465674.1;Name=WP_032465674.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_032465674.1;transl_table=11
NC_017153.1	RefSeq	gene	24166	24534	.	-	.	ID=gene4296;Name=YPD4_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21555;old_locus_tag=YPD4_pCD0024
NC_017153.1	Protein Homology	CDS	24166	24534	.	-	0	ID=cds4202;Parent=gene4296;Dbxref=Genbank:WP_002212969.1;Name=WP_002212969.1;gbkey=CDS;product=translocation protein YopX;protein_id=WP_002212969.1;transl_table=11
NC_017153.1	RefSeq	gene	24531	24902	.	-	.	ID=gene4297;Name=YPD4_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21560;old_locus_tag=YPD4_pCD0025
NC_017153.1	Protein Homology	CDS	24531	24902	.	-	0	ID=cds4203;Parent=gene4297;Dbxref=Genbank:WP_002229794.1;Name=WP_002229794.1;gbkey=CDS;product=chaperone protein SycN;protein_id=WP_002229794.1;transl_table=11
NC_017153.1	RefSeq	gene	24889	25167	.	-	.	ID=gene4298;Name=YPD4_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21565
NC_017153.1	Protein Homology	CDS	24889	25167	.	-	0	ID=cds4204;Parent=gene4298;Dbxref=Genbank:WP_002212965.1;Name=WP_002212965.1;gbkey=CDS;product=protein TyeA;protein_id=WP_002212965.1;transl_table=11
NC_017153.1	RefSeq	gene	25148	26029	.	-	.	ID=gene4299;Name=YPD4_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21570;old_locus_tag=YPD4_pCD0026
NC_017153.1	Protein Homology	CDS	25148	26029	.	-	0	ID=cds4205;Parent=gene4299;Dbxref=Genbank:WP_002212958.1;Name=WP_002212958.1;gbkey=CDS;product=outer membrane protein YopN;protein_id=WP_002212958.1;transl_table=11
NC_017153.1	RefSeq	gene	26227	27546	.	+	.	ID=gene4300;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPD4_RS21575;old_locus_tag=YPD4_pCD0027
NC_017153.1	Protein Homology	CDS	26227	27546	.	+	0	ID=cds4206;Parent=gene4300;Dbxref=Genbank:WP_002212955.1;Name=WP_002212955.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=ATP synthase;protein_id=WP_002212955.1;transl_table=11
NC_017153.1	RefSeq	gene	27543	28007	.	+	.	ID=gene4301;Name=YPD4_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21580;old_locus_tag=YPD4_pCD0028
NC_017153.1	Protein Homology	CDS	27543	28007	.	+	0	ID=cds4207;Parent=gene4301;Dbxref=Genbank:WP_002212952.1;Name=WP_002212952.1;gbkey=CDS;product=translocation protein YopO;protein_id=WP_002212952.1;transl_table=11
NC_017153.1	RefSeq	gene	28007	29374	.	+	.	ID=gene4302;Name=YPD4_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21585;old_locus_tag=YPD4_pCD0029
NC_017153.1	Protein Homology	CDS	28007	29374	.	+	0	ID=cds4208;Parent=gene4302;Dbxref=Genbank:WP_002212950.1;Name=WP_002212950.1;gbkey=CDS;product=translocation protein YopP;protein_id=WP_002212950.1;transl_table=11
NC_017153.1	RefSeq	gene	29371	30294	.	+	.	ID=gene4303;Name=YPD4_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21590;old_locus_tag=YPD4_pCD0030
NC_017153.1	Protein Homology	CDS	29371	30294	.	+	0	ID=cds4209;Parent=gene4303;Dbxref=Genbank:WP_002212948.1;Name=WP_002212948.1;gbkey=CDS;product=translocation protein YopQ;protein_id=WP_002212948.1;transl_table=11
NC_017153.1	RefSeq	gene	30291	30944	.	+	.	ID=gene4304;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPD4_RS21595;old_locus_tag=YPD4_pCD0031
NC_017153.1	Protein Homology	CDS	30291	30944	.	+	0	ID=cds4210;Parent=gene4304;Dbxref=Genbank:WP_002212947.1;Name=WP_002212947.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=translocation protein YopR;protein_id=WP_002212947.1;transl_table=11
NC_017153.1	RefSeq	gene	30946	31212	.	+	.	ID=gene4305;Name=YPD4_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21600
NC_017153.1	Protein Homology	CDS	30946	31212	.	+	0	ID=cds4211;Parent=gene4305;Dbxref=Genbank:WP_002212945.1;Name=WP_002212945.1;gbkey=CDS;product=translocation protein YopS;protein_id=WP_002212945.1;transl_table=11
NC_017153.1	RefSeq	gene	31209	31994	.	+	.	ID=gene4306;Name=YPD4_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21605;old_locus_tag=YPD4_pCD0032
NC_017153.1	Protein Homology	CDS	31209	31994	.	+	0	ID=cds4212;Parent=gene4306;Dbxref=Genbank:WP_002212938.1;Name=WP_002212938.1;gbkey=CDS;product=translocation protein YopT;protein_id=WP_002212938.1;transl_table=11
NC_017153.1	RefSeq	gene	31994	33058	.	+	.	ID=gene4307;Name=YPD4_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21610;old_locus_tag=YPD4_pCD0033
NC_017153.1	Protein Homology	CDS	31994	33058	.	+	0	ID=cds4213;Parent=gene4307;Dbxref=Genbank:WP_002212936.1;Name=WP_002212936.1;gbkey=CDS;product=translocation protein YopU;protein_id=WP_002212936.1;transl_table=11
NC_017153.1	RefSeq	gene	33634	34029	.	+	.	ID=gene4308;Name=YPD4_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21615;old_locus_tag=YPD4_pCD0034
NC_017153.1	Protein Homology	CDS	33634	34029	.	+	0	ID=cds4214;Parent=gene4308;Dbxref=Genbank:WP_002222527.1;Name=WP_002222527.1;gbkey=CDS;product=type III secretion system chaperone VirG;protein_id=WP_002222527.1;transl_table=11
NC_017153.1	RefSeq	gene	34153	34968	.	+	.	ID=gene4309;Name=YPD4_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21620;old_locus_tag=YPD4_pCD0035
NC_017153.1	Protein Homology	CDS	34153	34968	.	+	0	ID=cds4215;Parent=gene4309;Dbxref=Genbank:WP_002212931.1;Name=WP_002212931.1;gbkey=CDS;product=thermoregulatory protein LcrF;protein_id=WP_002212931.1;transl_table=11
NC_017153.1	RefSeq	gene	35047	35145	.	+	.	ID=gene4310;Name=YPD4_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21625
NC_017153.1	Protein Homology	CDS	35047	35145	.	+	0	ID=cds4216;Parent=gene4310;Dbxref=Genbank:WP_002229797.1;Name=WP_002229797.1;gbkey=CDS;product=translocation protein YopA;protein_id=WP_002229797.1;transl_table=11
NC_017153.1	RefSeq	gene	35371	35784	.	+	.	ID=gene4311;Name=YPD4_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21630;old_locus_tag=YPD4_pCD0036
NC_017153.1	Protein Homology	CDS	35371	35784	.	+	0	ID=cds4217;Parent=gene4311;Dbxref=Genbank:WP_002212925.1;Name=WP_002212925.1;gbkey=CDS;product=chaperone protein YscB;protein_id=WP_002212925.1;transl_table=11
NC_017153.1	RefSeq	gene	35790	37614	.	+	.	ID=gene4312;Name=YPD4_RS21635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS21635;pseudo=true
NC_017153.1	Protein Homology	CDS	35790	37614	.	+	0	ID=cds4218;Parent=gene4312;exception=annotated by transcript or proteomic data;gbkey=CDS;product=secretin;pseudo=true;transl_table=11
NC_017153.1	RefSeq	gene	37611	38870	.	+	.	ID=gene4313;Name=YPD4_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21640
NC_017153.1	Protein Homology	CDS	37611	38870	.	+	0	ID=cds4219;Parent=gene4313;Dbxref=Genbank:WP_002212919.1;Name=WP_002212919.1;gbkey=CDS;product=preprotein translocase D;protein_id=WP_002212919.1;transl_table=11
NC_017153.1	RefSeq	gene	38867	39067	.	+	.	ID=gene4314;Name=YPD4_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21645
NC_017153.1	Protein Homology	CDS	38867	39067	.	+	0	ID=cds4220;Parent=gene4314;Dbxref=Genbank:WP_002212917.1;Name=WP_002212917.1;gbkey=CDS;product=preprotein translocase SecE;protein_id=WP_002212917.1;transl_table=11
NC_017153.1	RefSeq	gene	39068	39331	.	+	.	ID=gene4315;Name=YPD4_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21650
NC_017153.1	Protein Homology	CDS	39068	39331	.	+	0	ID=cds4221;Parent=gene4315;Dbxref=Genbank:WP_002212916.1;Name=WP_002212916.1;gbkey=CDS;product=type III export protein pscF;protein_id=WP_002212916.1;transl_table=11
NC_017153.1	RefSeq	gene	39333	39680	.	+	.	ID=gene4316;Name=YPD4_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21655;old_locus_tag=YPD4_pCD0041
NC_017153.1	Protein Homology	CDS	39333	39680	.	+	0	ID=cds4222;Parent=gene4316;Dbxref=Genbank:WP_002229801.1;Name=WP_002229801.1;gbkey=CDS;product=preprotein translocase G;protein_id=WP_002229801.1;transl_table=11
NC_017153.1	RefSeq	gene	39677	40174	.	+	.	ID=gene4317;Name=YPD4_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21660;old_locus_tag=YPD4_pCD0042
NC_017153.1	Protein Homology	CDS	39677	40174	.	+	0	ID=cds4223;Parent=gene4317;Dbxref=Genbank:WP_002212915.1;Name=WP_002212915.1;gbkey=CDS;product=translocation protein YopH;protein_id=WP_002212915.1;transl_table=11
NC_017153.1	RefSeq	gene	40184	40522	.	+	.	ID=gene4318;Name=YPD4_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21665;old_locus_tag=YPD4_pCD0043
NC_017153.1	Protein Homology	CDS	40184	40522	.	+	0	ID=cds4224;Parent=gene4318;Dbxref=Genbank:WP_032465675.1;Name=WP_032465675.1;gbkey=CDS;product=preprotein translocase I;protein_id=WP_032465675.1;transl_table=11
NC_017153.1	RefSeq	gene	40529	41263	.	+	.	ID=gene4319;Name=YPD4_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21670;old_locus_tag=YPD4_pCD0044
NC_017153.1	Protein Homology	CDS	40529	41263	.	+	0	ID=cds4225;Parent=gene4319;Dbxref=Genbank:WP_002212912.1;Name=WP_002212912.1;gbkey=CDS;product=translocation protein YopJ;protein_id=WP_002212912.1;transl_table=11
NC_017153.1	RefSeq	gene	41266	41892	.	+	.	ID=gene4320;Name=YPD4_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21675;old_locus_tag=YPD4_pCD0045
NC_017153.1	Protein Homology	CDS	41266	41892	.	+	0	ID=cds4226;Parent=gene4320;Dbxref=Genbank:WP_002212911.1;Name=WP_002212911.1;gbkey=CDS;product=preprotein translocase K;protein_id=WP_002212911.1;transl_table=11
NC_017153.1	RefSeq	gene	41871	42503	.	+	.	ID=gene4321;Name=YPD4_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21680;old_locus_tag=YPD4_pCD0046
NC_017153.1	Protein Homology	CDS	41871	42503	.	+	0	ID=cds4227;Parent=gene4321;Dbxref=Genbank:WP_002212909.1;Name=WP_002212909.1;gbkey=CDS;product=type III secretion system protein;protein_id=WP_002212909.1;transl_table=11
NC_017153.1	RefSeq	gene	42728	43075	.	+	.	ID=gene4322;Name=YPD4_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21685;old_locus_tag=YPD4_pCD0047
NC_017153.1	Protein Homology	CDS	42728	43075	.	+	0	ID=cds4228;Parent=gene4322;Dbxref=Genbank:WP_002212907.1;Name=WP_002212907.1;gbkey=CDS;product=translocation protein YopM;protein_id=WP_002212907.1;transl_table=11
NC_017153.1	RefSeq	gene	43623	43889	.	+	.	ID=gene4323;Name=YPD4_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21690
NC_017153.1	Protein Homology	CDS	43623	43889	.	+	0	ID=cds4229;Parent=gene4323;Dbxref=Genbank:WP_002212900.1;Name=WP_002212900.1;gbkey=CDS;product=low calcium response locus protein S;protein_id=WP_002212900.1;transl_table=11
NC_017153.1	RefSeq	gene	43925	44347	.	+	.	ID=gene4324;Name=YPD4_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21695;old_locus_tag=YPD4_pCD0048
NC_017153.1	Protein Homology	CDS	43925	44347	.	+	0	ID=cds4230;Parent=gene4324;Dbxref=Genbank:WP_002229803.1;Name=WP_002229803.1;gbkey=CDS;product=low calcium response locus protein T;protein_id=WP_002229803.1;transl_table=11
NC_017153.1	RefSeq	gene	44365	44652	.	+	.	ID=gene4325;Name=YPD4_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21700
NC_017153.1	Protein Homology	CDS	44365	44652	.	+	0	ID=cds4231;Parent=gene4325;Dbxref=Genbank:WP_002356326.1;Name=WP_002356326.1;gbkey=CDS;product=integrase;protein_id=WP_002356326.1;transl_table=11
NC_017153.1	RefSeq	gene	45164	46570	.	-	.	ID=gene4326;Name=YPD4_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21705;old_locus_tag=YPD4_pCD0049
NC_017153.1	Protein Homology	CDS	45164	46570	.	-	0	ID=cds4232;Parent=gene4326;Dbxref=Genbank:WP_002213278.1;Name=WP_002213278.1;gbkey=CDS;product=tyrosine-protein phosphatase YopH;protein_id=WP_002213278.1;transl_table=11
NC_017153.1	RefSeq	gene	46853	47059	.	-	.	ID=gene4327;Name=YPD4_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21710
NC_017153.1	Protein Homology	CDS	46853	47059	.	-	0	ID=cds4233;Parent=gene4327;Dbxref=Genbank:WP_002213282.1;Name=WP_002213282.1;gbkey=CDS;product=transposase;protein_id=WP_002213282.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	47088	47699	.	+	.	ID=id373;gbkey=repeat_region
NC_017153.1	RefSeq	gene	47191	47667	.	+	.	ID=gene4328;Name=YPD4_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21715;old_locus_tag=YPD4_pCD0050
NC_017153.1	Protein Homology	CDS	47191	47667	.	+	0	ID=cds4234;Parent=gene4328;Dbxref=Genbank:WP_002213284.1;Name=WP_002213284.1;gbkey=CDS;product=integrase;protein_id=WP_002213284.1;transl_table=11
NC_017153.1	RefSeq	gene	48253	49119	.	-	.	ID=gene4329;Name=YPD4_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21720;old_locus_tag=YPD4_pCD0051
NC_017153.1	Protein Homology	CDS	48253	49119	.	-	0	ID=cds4235;Parent=gene4329;Dbxref=Genbank:WP_002213287.1;Name=WP_002213287.1;gbkey=CDS;product=effector protein YopJ;protein_id=WP_002213287.1;transl_table=11
NC_017153.1	RefSeq	gene	49515	51713	.	-	.	ID=gene4330;Name=YPD4_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21725;old_locus_tag=YPD4_pCD0052
NC_017153.1	Protein Homology	CDS	49515	51713	.	-	0	ID=cds4236;Parent=gene4330;Dbxref=Genbank:WP_002213290.1;Name=WP_002213290.1;gbkey=CDS;product=protein kinase YpkA;protein_id=WP_002213290.1;transl_table=11
NC_017153.1	RefSeq	gene	51721	52170	.	-	.	ID=gene4331;Name=YPD4_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21730;old_locus_tag=YPD4_pCD0053
NC_017153.1	Protein Homology	CDS	51721	52170	.	-	0	ID=cds4237;Parent=gene4331;Dbxref=Genbank:WP_002229809.1;Name=WP_002229809.1;gbkey=CDS;product=molecular chaperone Tir;protein_id=WP_002229809.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	52408	52741	.	+	.	ID=id374;gbkey=repeat_region
NC_017153.1	RefSeq	gene	52466	52660	.	-	.	ID=gene4332;Name=YPD4_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21735
NC_017153.1	Protein Homology	CDS	52466	52660	.	-	0	ID=cds4238;Parent=gene4332;Dbxref=Genbank:WP_011191370.1;Name=WP_011191370.1;gbkey=CDS;product=transposase;protein_id=WP_011191370.1;transl_table=11
NC_017153.1	RefSeq	gene	54328	55194	.	-	.	ID=gene4333;Name=YPD4_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21740;old_locus_tag=YPD4_pCD0054
NC_017153.1	Protein Homology	CDS	54328	55194	.	-	0	ID=cds4239;Parent=gene4333;Dbxref=Genbank:WP_002225475.1;Name=WP_002225475.1;gbkey=CDS;product=replication protein;protein_id=WP_002225475.1;transl_table=11
NC_017153.1	RefSeq	gene	55187	55261	.	-	.	ID=gene4334;Name=YPD4_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21745
NC_017153.1	Protein Homology	CDS	55187	55261	.	-	0	ID=cds4240;Parent=gene4334;Dbxref=Genbank:WP_002233140.1;Name=WP_002233140.1;Note=acts to regulate the expression of the plasmid replication protein RepA in the IncFII plasmid group;gbkey=CDS;product=RepA leader peptide Tap-containing protein;protein_id=WP_002233140.1;transl_table=11
NC_017153.1	RefSeq	gene	55503	55757	.	-	.	ID=gene4335;Name=YPD4_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21750
NC_017153.1	Protein Homology	CDS	55503	55757	.	-	0	ID=cds4241;Parent=gene4335;Dbxref=Genbank:WP_002229817.1;Name=WP_002229817.1;gbkey=CDS;product=replication protein;protein_id=WP_002229817.1;transl_table=11
NC_017153.1	RefSeq	gene	55895	56143	.	-	.	ID=gene4336;Name=YPD4_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21755
NC_017153.1	Protein Homology	CDS	55895	56143	.	-	0	ID=cds4242;Parent=gene4336;Dbxref=Genbank:WP_002233137.1;Name=WP_002233137.1;gbkey=CDS;product=phospholipase;protein_id=WP_002233137.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	56145	57381	.	+	.	ID=id375;gbkey=repeat_region
NC_017153.1	RefSeq	gene	56560	56967	.	-	.	ID=gene4337;Name=YPD4_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21760;old_locus_tag=YPD4_pCD0055
NC_017153.1	Protein Homology	CDS	56560	56967	.	-	0	ID=cds4243;Parent=gene4337;Dbxref=Genbank:WP_002213294.1;Name=WP_002213294.1;gbkey=CDS;product=transposase;protein_id=WP_002213294.1;transl_table=11
NC_017153.1	RefSeq	gene	56991	57308	.	-	.	ID=gene4338;Name=YPD4_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21765;old_locus_tag=YPD4_pCD0056
NC_017153.1	Protein Homology	CDS	56991	57308	.	-	0	ID=cds4244;Parent=gene4338;Dbxref=Genbank:WP_002213244.1;Name=WP_002213244.1;gbkey=CDS;product=transposase;protein_id=WP_002213244.1;transl_table=11
NC_017153.1	RefSeq	gene	57480	57938	.	-	.	ID=gene4339;Name=YPD4_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21770;old_locus_tag=YPD4_pCD0057
NC_017153.1	Protein Homology	CDS	57480	57938	.	-	0	ID=cds4245;Parent=gene4339;Dbxref=Genbank:WP_002213246.1;Name=WP_002213246.1;gbkey=CDS;product=DNA helicase TraI;protein_id=WP_002213246.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	57981	58375	.	+	.	ID=id376;gbkey=repeat_region
NC_017153.1	RefSeq	gene	58007	58276	.	+	.	ID=gene4340;Name=YPD4_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21775
NC_017153.1	Protein Homology	CDS	58007	58276	.	+	0	ID=cds4246;Parent=gene4340;Dbxref=Genbank:WP_042469136.1;Name=WP_042469136.1;gbkey=CDS;product=transposase;protein_id=WP_042469136.1;transl_table=11
NC_017153.1	RefSeq	gene	58273	58479	.	-	.	ID=gene4341;Name=YPD4_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21780
NC_017153.1	Protein Homology	CDS	58273	58479	.	-	0	ID=cds4247;Parent=gene4341;Dbxref=Genbank:WP_011557428.1;Name=WP_011557428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011557428.1;transl_table=11
NC_017153.1	RefSeq	gene	58602	59177	.	-	.	ID=gene4342;Name=YPD4_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21785
NC_017153.1	Protein Homology	CDS	58602	59177	.	-	0	ID=cds4248;Parent=gene4342;Dbxref=Genbank:WP_002353282.1;Name=WP_002353282.1;gbkey=CDS;product=adhesin;protein_id=WP_002353282.1;transl_table=11
NC_017153.1	RefSeq	gene	59654	59905	.	-	.	ID=gene4343;Name=YPD4_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21790
NC_017153.1	Protein Homology	CDS	59654	59905	.	-	0	ID=cds4249;Parent=gene4343;Dbxref=Genbank:WP_002356450.1;Name=WP_002356450.1;gbkey=CDS;product=adhesin;protein_id=WP_002356450.1;transl_table=11
NC_017153.1	RefSeq	gene	60511	60891	.	+	.	ID=gene4344;Name=YPD4_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21795;old_locus_tag=YPD4_pCD0059
NC_017153.1	Protein Homology	CDS	60511	60891	.	+	0	ID=cds4250;Parent=gene4344;Dbxref=Genbank:WP_002213254.1;Name=WP_002213254.1;gbkey=CDS;product=transposase;protein_id=WP_002213254.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	60588	60733	.	+	.	ID=id377;gbkey=repeat_region
NC_017153.1	RefSeq	gene	60888	63203	.	-	.	ID=gene4345;Name=YPD4_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21800;old_locus_tag=YPD4_pCD0060
NC_017153.1	Protein Homology	CDS	60888	63203	.	-	0	ID=cds4251;Parent=gene4345;Dbxref=Genbank:WP_002213256.1;Name=WP_002213256.1;gbkey=CDS;product=transposase;protein_id=WP_002213256.1;transl_table=11
NC_017153.1	RefSeq	gene	63367	63918	.	+	.	ID=gene4346;Name=YPD4_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21805;old_locus_tag=YPD4_pCD0061
NC_017153.1	Protein Homology	CDS	63367	63918	.	+	0	ID=cds4252;Parent=gene4346;Dbxref=Genbank:WP_002213258.1;Name=WP_002213258.1;gbkey=CDS;product=recombinase;protein_id=WP_002213258.1;transl_table=11
NC_017153.1	RefSeq	gene	63937	64401	.	+	.	ID=gene4347;Name=YPD4_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21810;old_locus_tag=YPD4_pCD0062
NC_017153.1	Protein Homology	CDS	63937	64401	.	+	0	ID=cds4253;Parent=gene4347;Dbxref=Genbank:WP_002224338.1;Name=WP_002224338.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224338.1;transl_table=11
NC_017153.1	RefSeq	gene	64540	64869	.	+	.	ID=gene4348;Name=YPD4_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21815;old_locus_tag=YPD4_pCD0063
NC_017153.1	Protein Homology	CDS	64540	64869	.	+	0	ID=cds4254;Parent=gene4348;Dbxref=Genbank:WP_002229829.1;Name=WP_002229829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002229829.1;transl_table=11
NC_017153.1	RefSeq	gene	64969	65235	.	+	.	ID=gene4349;Name=YPD4_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21820
NC_017153.1	Protein Homology	CDS	64969	65235	.	+	0	ID=cds4255;Parent=gene4349;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11
NC_017153.1	RefSeq	gene	65241	66068	.	+	.	ID=gene4350;Name=YPD4_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21825;old_locus_tag=YPD4_pCD0064
NC_017153.1	Protein Homology	CDS	65241	66068	.	+	0	ID=cds4256;Parent=gene4350;Dbxref=Genbank:WP_032465673.1;Name=WP_032465673.1;gbkey=CDS;product=transposase;protein_id=WP_032465673.1;transl_table=11
NC_017153.1	RefSeq	repeat_region	65489	66100	.	+	.	ID=id378;gbkey=repeat_region
NC_017153.1	RefSeq	gene	66216	66641	.	-	.	ID=gene4351;Name=YPD4_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21830;old_locus_tag=YPD4_pCD0065
NC_017153.1	Protein Homology	CDS	66216	66641	.	-	0	ID=cds4257;Parent=gene4351;Dbxref=Genbank:WP_002213267.1;Name=WP_002213267.1;gbkey=CDS;product=yopH targeting protein;protein_id=WP_002213267.1;transl_table=11
NC_017153.1	RefSeq	gene	67017	67415	.	-	.	ID=gene4352;Name=YPD4_RS21835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS21835;old_locus_tag=YPD4_pCD0066;partial=true;pseudo=true;start_range=.,67017
NC_017153.1	Protein Homology	CDS	67017	67415	.	-	0	ID=cds4258;Parent=gene4352;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,67017;transl_table=11
##sequence-region NC_017155.1 1 94249
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=637382
NC_017155.1	RefSeq	region	1	94249	.	+	.	ID=id379;Dbxref=taxon:637382;Is_circular=true;Name=pMT1;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pMT1;strain=D106004
NC_017155.1	RefSeq	gene	87	1109	.	+	.	ID=gene4353;Name=YPD4_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21845;old_locus_tag=YPD4_pMT0001
NC_017155.1	Protein Homology	CDS	87	1109	.	+	0	ID=cds4259;Parent=gene4353;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017155.1	RefSeq	gene	1109	1888	.	+	.	ID=gene4354;Name=YPD4_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21850;old_locus_tag=YPD4_pMT0002
NC_017155.1	Protein Homology	CDS	1109	1888	.	+	0	ID=cds4260;Parent=gene4354;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017155.1	RefSeq	gene	2022	2630	.	-	.	ID=gene4355;Name=YPD4_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21855;old_locus_tag=YPD4_pMT0003
NC_017155.1	Protein Homology	CDS	2022	2630	.	-	0	ID=cds4261;Parent=gene4355;Dbxref=Genbank:WP_002211769.1;Name=WP_002211769.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_002211769.1;transl_table=11
NC_017155.1	RefSeq	gene	2723	2935	.	-	.	ID=gene4356;Name=YPD4_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21860
NC_017155.1	Protein Homology	CDS	2723	2935	.	-	0	ID=cds4262;Parent=gene4356;Dbxref=Genbank:WP_002217458.1;Name=WP_002217458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217458.1;transl_table=11
NC_017155.1	RefSeq	gene	2932	5820	.	-	.	ID=gene4357;Name=YPD4_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21865;old_locus_tag=YPD4_pMT0004
NC_017155.1	Protein Homology	CDS	2932	5820	.	-	0	ID=cds4263;Parent=gene4357;Dbxref=Genbank:WP_002211770.1;Name=WP_002211770.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211770.1;transl_table=11
NC_017155.1	RefSeq	gene	5901	6533	.	-	.	ID=gene4358;Name=YPD4_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21870;old_locus_tag=YPD4_pMT0005
NC_017155.1	Protein Homology	CDS	5901	6533	.	-	0	ID=cds4264;Parent=gene4358;Dbxref=Genbank:WP_002214116.1;Name=WP_002214116.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214116.1;transl_table=11
NC_017155.1	RefSeq	gene	6536	11167	.	-	.	ID=gene4359;Name=YPD4_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21875;old_locus_tag=YPD4_pMT0006
NC_017155.1	Protein Homology	CDS	6536	11167	.	-	0	ID=cds4265;Parent=gene4359;Dbxref=Genbank:WP_002214118.1;Name=WP_002214118.1;gbkey=CDS;product=host specificity protein J;protein_id=WP_002214118.1;transl_table=11
NC_017155.1	RefSeq	gene	11189	11776	.	-	.	ID=gene4360;Name=YPD4_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21880;old_locus_tag=YPD4_pMT0007
NC_017155.1	Protein Homology	CDS	11189	11776	.	-	0	ID=cds4266;Parent=gene4360;Dbxref=Genbank:WP_002211773.1;Name=WP_002211773.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211773.1;transl_table=11
NC_017155.1	RefSeq	gene	11764	12561	.	-	.	ID=gene4361;Name=YPD4_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21885;old_locus_tag=YPD4_pMT0008
NC_017155.1	Protein Homology	CDS	11764	12561	.	-	0	ID=cds4267;Parent=gene4361;Dbxref=Genbank:WP_002211774.1;Name=WP_002211774.1;gbkey=CDS;product=tail protein;protein_id=WP_002211774.1;transl_table=11
NC_017155.1	RefSeq	gene	12554	13252	.	-	.	ID=gene4362;Name=YPD4_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21890;old_locus_tag=YPD4_pMT0009
NC_017155.1	Protein Homology	CDS	12554	13252	.	-	0	ID=cds4268;Parent=gene4362;Dbxref=Genbank:WP_002211775.1;Name=WP_002211775.1;gbkey=CDS;product=tail protein;protein_id=WP_002211775.1;transl_table=11
NC_017155.1	RefSeq	gene	13342	13677	.	-	.	ID=gene4363;Name=YPD4_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21895;old_locus_tag=YPD4_pMT0010
NC_017155.1	Protein Homology	CDS	13342	13677	.	-	0	ID=cds4269;Parent=gene4363;Dbxref=Genbank:WP_000440566.1;Name=WP_000440566.1;gbkey=CDS;product=tail protein;protein_id=WP_000440566.1;transl_table=11
NC_017155.1	RefSeq	gene	13719	18296	.	-	.	ID=gene4364;Name=YPD4_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21900;old_locus_tag=YPD4_pMT0011
NC_017155.1	Protein Homology	CDS	13719	18296	.	-	0	ID=cds4270;Parent=gene4364;Dbxref=Genbank:WP_002211776.1;Name=WP_002211776.1;gbkey=CDS;product=phage tail tape measure protein;protein_id=WP_002211776.1;transl_table=11
NC_017155.1	RefSeq	gene	18304	18537	.	-	.	ID=gene4365;Name=YPD4_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21905
NC_017155.1	Protein Homology	CDS	18304	18537	.	-	0	ID=cds4271;Parent=gene4365;Dbxref=Genbank:WP_002211777.1;Name=WP_002211777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211777.1;transl_table=11
NC_017155.1	RefSeq	gene	18654	18971	.	-	.	ID=gene4366;Name=YPD4_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21915;old_locus_tag=YPD4_pMT0012
NC_017155.1	Protein Homology	CDS	18654	18971	.	-	0	ID=cds4272;Parent=gene4366;Dbxref=Genbank:WP_000163862.1;Name=WP_000163862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000163862.1;transl_table=11
NC_017155.1	RefSeq	gene	19031	19777	.	-	.	ID=gene4367;Name=YPD4_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21920;old_locus_tag=YPD4_pMT0013
NC_017155.1	Protein Homology	CDS	19031	19777	.	-	0	ID=cds4273;Parent=gene4367;Dbxref=Genbank:WP_002211778.1;Name=WP_002211778.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211778.1;transl_table=11
NC_017155.1	RefSeq	gene	19852	20235	.	-	.	ID=gene4368;Name=YPD4_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21925;old_locus_tag=YPD4_pMT0014
NC_017155.1	Protein Homology	CDS	19852	20235	.	-	0	ID=cds4274;Parent=gene4368;Dbxref=Genbank:WP_002211779.1;Name=WP_002211779.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211779.1;transl_table=11
NC_017155.1	RefSeq	gene	20237	20710	.	-	.	ID=gene4369;Name=YPD4_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21930;old_locus_tag=YPD4_pMT0015
NC_017155.1	Protein Homology	CDS	20237	20710	.	-	0	ID=cds4275;Parent=gene4369;Dbxref=Genbank:WP_002211780.1;Name=WP_002211780.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211780.1;transl_table=11
NC_017155.1	RefSeq	gene	20701	21045	.	-	.	ID=gene4370;Name=YPD4_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21935;old_locus_tag=YPD4_pMT0016
NC_017155.1	Protein Homology	CDS	20701	21045	.	-	0	ID=cds4276;Parent=gene4370;Dbxref=Genbank:WP_001027662.1;Name=WP_001027662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001027662.1;transl_table=11
NC_017155.1	RefSeq	gene	21143	21976	.	-	.	ID=gene4371;Name=YPD4_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21940;old_locus_tag=YPD4_pMT0017
NC_017155.1	Protein Homology	CDS	21143	21976	.	-	0	ID=cds4277;Parent=gene4371;Dbxref=Genbank:WP_002211781.1;Name=WP_002211781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211781.1;transl_table=11
NC_017155.1	RefSeq	gene	21976	22410	.	-	.	ID=gene4372;Name=YPD4_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21945;old_locus_tag=YPD4_pMT0018
NC_017155.1	Protein Homology	CDS	21976	22410	.	-	0	ID=cds4278;Parent=gene4372;Dbxref=Genbank:WP_002211782.1;Name=WP_002211782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211782.1;transl_table=11
NC_017155.1	RefSeq	gene	22454	23116	.	-	.	ID=gene4373;Name=YPD4_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21950;old_locus_tag=YPD4_pMT0019
NC_017155.1	Protein Homology	CDS	22454	23116	.	-	0	ID=cds4279;Parent=gene4373;Dbxref=Genbank:WP_002211783.1;Name=WP_002211783.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211783.1;transl_table=11
NC_017155.1	RefSeq	gene	23191	24066	.	-	.	ID=gene4374;Name=YPD4_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21955;old_locus_tag=YPD4_pMT0020
NC_017155.1	Protein Homology	CDS	23191	24066	.	-	0	ID=cds4280;Parent=gene4374;Dbxref=Genbank:WP_002211784.1;Name=WP_002211784.1;gbkey=CDS;product=phage capsid protein;protein_id=WP_002211784.1;transl_table=11
NC_017155.1	RefSeq	gene	24093	24926	.	-	.	ID=gene4375;Name=YPD4_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21960;old_locus_tag=YPD4_pMT0021
NC_017155.1	Protein Homology	CDS	24093	24926	.	-	0	ID=cds4281;Parent=gene4375;Dbxref=Genbank:WP_002211785.1;Name=WP_002211785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211785.1;transl_table=11
NC_017155.1	RefSeq	gene	24949	26523	.	-	.	ID=gene4376;Name=YPD4_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21965;old_locus_tag=YPD4_pMT0022
NC_017155.1	Protein Homology	CDS	24949	26523	.	-	0	ID=cds4282;Parent=gene4376;Dbxref=Genbank:WP_014462191.1;Name=WP_014462191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_014462191.1;transl_table=11
NC_017155.1	RefSeq	gene	26557	27813	.	-	.	ID=gene4377;Name=YPD4_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21970;old_locus_tag=YPD4_pMT0023
NC_017155.1	Protein Homology	CDS	26557	27813	.	-	0	ID=cds4283;Parent=gene4377;Dbxref=Genbank:WP_002211787.1;Name=WP_002211787.1;gbkey=CDS;product=terminase;protein_id=WP_002211787.1;transl_table=11
NC_017155.1	RefSeq	gene	27816	28457	.	-	.	ID=gene4378;Name=YPD4_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21975;old_locus_tag=YPD4_pMT0024
NC_017155.1	Protein Homology	CDS	27816	28457	.	-	0	ID=cds4284;Parent=gene4378;Dbxref=Genbank:WP_002211788.1;Name=WP_002211788.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211788.1;transl_table=11
NC_017155.1	RefSeq	gene	28653	28919	.	-	.	ID=gene4379;Name=YPD4_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21980
NC_017155.1	Protein Homology	CDS	28653	28919	.	-	0	ID=cds4285;Parent=gene4379;Dbxref=Genbank:WP_000176291.1;Name=WP_000176291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000176291.1;transl_table=11
NC_017155.1	RefSeq	gene	28929	29819	.	-	.	ID=gene4380;Name=YPD4_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21985;old_locus_tag=YPD4_pMT0025
NC_017155.1	Protein Homology	CDS	28929	29819	.	-	0	ID=cds4286;Parent=gene4380;Dbxref=Genbank:WP_002211789.1;Name=WP_002211789.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211789.1;transl_table=11
NC_017155.1	RefSeq	gene	29825	30079	.	-	.	ID=gene4381;Name=YPD4_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21990
NC_017155.1	Protein Homology	CDS	29825	30079	.	-	0	ID=cds4287;Parent=gene4381;Dbxref=Genbank:WP_002211790.1;Name=WP_002211790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211790.1;transl_table=11
NC_017155.1	RefSeq	gene	30072	30710	.	-	.	ID=gene4382;Name=YPD4_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS21995;old_locus_tag=YPD4_pMT0026
NC_017155.1	Protein Homology	CDS	30072	30710	.	-	0	ID=cds4288;Parent=gene4382;Dbxref=Genbank:WP_002211791.1;Name=WP_002211791.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211791.1;transl_table=11
NC_017155.1	RefSeq	gene	30707	31375	.	-	.	ID=gene4383;Name=YPD4_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22000;old_locus_tag=YPD4_pMT0027
NC_017155.1	Protein Homology	CDS	30707	31375	.	-	0	ID=cds4289;Parent=gene4383;Dbxref=Genbank:WP_014462192.1;Name=WP_014462192.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_014462192.1;transl_table=11
NC_017155.1	RefSeq	gene	31375	32073	.	-	.	ID=gene4384;Name=YPD4_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22005;old_locus_tag=YPD4_pMT0028
NC_017155.1	Protein Homology	CDS	31375	32073	.	-	0	ID=cds4290;Parent=gene4384;Dbxref=Genbank:WP_002228791.1;Name=WP_002228791.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002228791.1;transl_table=11
NC_017155.1	RefSeq	gene	32138	33697	.	+	.	ID=gene4385;Name=YPD4_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22010;old_locus_tag=YPD4_pMT0029
NC_017155.1	Protein Homology	CDS	32138	33697	.	+	0	ID=cds4291;Parent=gene4385;Dbxref=Genbank:WP_002211794.1;Name=WP_002211794.1;gbkey=CDS;product=helicase;protein_id=WP_002211794.1;transl_table=11
NC_017155.1	RefSeq	gene	33700	33978	.	+	.	ID=gene4386;Name=YPD4_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22015
NC_017155.1	Protein Homology	CDS	33700	33978	.	+	0	ID=cds4292;Parent=gene4386;Dbxref=Genbank:WP_044023438.1;Name=WP_044023438.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_044023438.1;transl_table=11
NC_017155.1	RefSeq	gene	34038	34460	.	+	.	ID=gene4387;Name=YPD4_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22020;old_locus_tag=YPD4_pMT0030
NC_017155.1	Protein Homology	CDS	34038	34460	.	+	0	ID=cds4293;Parent=gene4387;Dbxref=Genbank:WP_002211796.1;Name=WP_002211796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211796.1;transl_table=11
NC_017155.1	RefSeq	gene	34465	34992	.	+	.	ID=gene4388;Name=YPD4_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22025;old_locus_tag=YPD4_pMT0031
NC_017155.1	Protein Homology	CDS	34465	34992	.	+	0	ID=cds4294;Parent=gene4388;Dbxref=Genbank:WP_002214134.1;Name=WP_002214134.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214134.1;transl_table=11
NC_017155.1	RefSeq	gene	35315	35965	.	+	.	ID=gene4389;Name=YPD4_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22030;old_locus_tag=YPD4_pMT0032
NC_017155.1	Protein Homology	CDS	35315	35965	.	+	0	ID=cds4295;Parent=gene4389;Dbxref=Genbank:WP_002211799.1;Name=WP_002211799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211799.1;transl_table=11
NC_017155.1	RefSeq	gene	36050	36277	.	+	.	ID=gene4390;Name=YPD4_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22035
NC_017155.1	Protein Homology	CDS	36050	36277	.	+	0	ID=cds4296;Parent=gene4390;Dbxref=Genbank:WP_002214137.1;Name=WP_002214137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214137.1;transl_table=11
NC_017155.1	RefSeq	gene	36578	36937	.	+	.	ID=gene4391;Name=YPD4_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22040
NC_017155.1	Protein Homology	CDS	36578	36937	.	+	0	ID=cds4297;Parent=gene4391;Dbxref=Genbank:WP_002214139.1;Name=WP_002214139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214139.1;transl_table=11
NC_017155.1	RefSeq	gene	36916	37398	.	-	.	ID=gene4392;Name=YPD4_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22045;old_locus_tag=YPD4_pMT0033
NC_017155.1	Protein Homology	CDS	36916	37398	.	-	0	ID=cds4298;Parent=gene4392;Dbxref=Genbank:WP_002211801.1;Name=WP_002211801.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211801.1;transl_table=11
NC_017155.1	RefSeq	gene	37411	37587	.	-	.	ID=gene4393;Name=YPD4_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22050
NC_017155.1	Protein Homology	CDS	37411	37587	.	-	0	ID=cds4299;Parent=gene4393;Dbxref=Genbank:WP_002233073.1;Name=WP_002233073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002233073.1;transl_table=11
NC_017155.1	RefSeq	gene	37604	37885	.	-	.	ID=gene4394;Name=YPD4_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22055
NC_017155.1	Protein Homology	CDS	37604	37885	.	-	0	ID=cds4300;Parent=gene4394;Dbxref=Genbank:WP_002211802.1;Name=WP_002211802.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211802.1;transl_table=11
NC_017155.1	RefSeq	gene	38085	38543	.	-	.	ID=gene4395;Name=YPD4_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22060;old_locus_tag=YPD4_pMT0034
NC_017155.1	Protein Homology	CDS	38085	38543	.	-	0	ID=cds4301;Parent=gene4395;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11
NC_017155.1	RefSeq	gene	38553	38676	.	-	.	ID=gene4396;Name=YPD4_RS22455;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPD4_RS22455
NC_017155.1	cmsearch	ncRNA	38553	38676	.	-	.	ID=rna88;Parent=gene4396;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA
NC_017155.1	cmsearch	exon	38553	38676	.	-	.	ID=id380;Parent=rna88;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA
NC_017155.1	RefSeq	gene	38752	39321	.	-	.	ID=gene4397;Name=YPD4_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22065;old_locus_tag=YPD4_pMT0035
NC_017155.1	Protein Homology	CDS	38752	39321	.	-	0	ID=cds4302;Parent=gene4397;Dbxref=Genbank:WP_002214145.1;Name=WP_002214145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214145.1;transl_table=11
NC_017155.1	RefSeq	gene	39334	40080	.	-	.	ID=gene4398;Name=YPD4_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22070;old_locus_tag=YPD4_pMT0036
NC_017155.1	Protein Homology	CDS	39334	40080	.	-	0	ID=cds4303;Parent=gene4398;Dbxref=Genbank:WP_002213303.1;Name=WP_002213303.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213303.1;transl_table=11
NC_017155.1	RefSeq	gene	40070	41986	.	-	.	ID=gene4399;Name=YPD4_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22075;old_locus_tag=YPD4_pMT0037
NC_017155.1	Protein Homology	CDS	40070	41986	.	-	0	ID=cds4304;Parent=gene4399;Dbxref=Genbank:WP_002214148.1;Name=WP_002214148.1;gbkey=CDS;product=exonuclease;protein_id=WP_002214148.1;transl_table=11
NC_017155.1	RefSeq	gene	41995	42219	.	-	.	ID=gene4400;Name=YPD4_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22080
NC_017155.1	Protein Homology	CDS	41995	42219	.	-	0	ID=cds4305;Parent=gene4400;Dbxref=Genbank:WP_002228794.1;Name=WP_002228794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228794.1;transl_table=11
NC_017155.1	RefSeq	gene	42216	43301	.	-	.	ID=gene4401;Name=YPD4_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22085;old_locus_tag=YPD4_pMT0038
NC_017155.1	Protein Homology	CDS	42216	43301	.	-	0	ID=cds4306;Parent=gene4401;Dbxref=Genbank:WP_002213300.1;Name=WP_002213300.1;gbkey=CDS;product=exonuclease;protein_id=WP_002213300.1;transl_table=11
NC_017155.1	RefSeq	gene	43450	43638	.	+	.	ID=gene4402;Name=YPD4_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22090
NC_017155.1	Protein Homology	CDS	43450	43638	.	+	0	ID=cds4307;Parent=gene4402;Dbxref=Genbank:WP_002214154.1;Name=WP_002214154.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214154.1;transl_table=11
NC_017155.1	RefSeq	gene	43717	44739	.	+	.	ID=gene4403;Name=YPD4_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22095;old_locus_tag=YPD4_pMT0039
NC_017155.1	Protein Homology	CDS	43717	44739	.	+	0	ID=cds4308;Parent=gene4403;Dbxref=Genbank:WP_002213298.1;Name=WP_002213298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213298.1;transl_table=11
NC_017155.1	RefSeq	gene	44877	45023	.	-	.	ID=gene4404;Name=YPD4_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22100
NC_017155.1	Protein Homology	CDS	44877	45023	.	-	0	ID=cds4309;Parent=gene4404;Dbxref=Genbank:WP_002214158.1;Name=WP_002214158.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214158.1;transl_table=11
NC_017155.1	RefSeq	gene	45099	45743	.	-	.	ID=gene4405;Name=YPD4_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22105;old_locus_tag=YPD4_pMT0040
NC_017155.1	Protein Homology	CDS	45099	45743	.	-	0	ID=cds4310;Parent=gene4405;Dbxref=Genbank:WP_002214160.1;Name=WP_002214160.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214160.1;transl_table=11
NC_017155.1	RefSeq	gene	46488	47552	.	+	.	ID=gene4406;Name=YPD4_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22110;old_locus_tag=YPD4_pMT0041
NC_017155.1	Protein Homology	CDS	46488	47552	.	+	0	ID=cds4311;Parent=gene4406;Dbxref=Genbank:WP_002214164.1;Name=WP_002214164.1;gbkey=CDS;product=replication protein RepA;protein_id=WP_002214164.1;transl_table=11
NC_017155.1	RefSeq	gene	48121	48333	.	-	.	ID=gene4407;Name=YPD4_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22115
NC_017155.1	Protein Homology	CDS	48121	48333	.	-	0	ID=cds4312;Parent=gene4407;Dbxref=Genbank:WP_002222711.1;Name=WP_002222711.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222711.1;transl_table=11
NC_017155.1	RefSeq	gene	48333	48668	.	-	.	ID=gene4408;Name=YPD4_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22120;old_locus_tag=YPD4_pMT0042
NC_017155.1	Protein Homology	CDS	48333	48668	.	-	0	ID=cds4313;Parent=gene4408;Dbxref=Genbank:WP_002227818.1;Name=WP_002227818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227818.1;transl_table=11
NC_017155.1	RefSeq	gene	48665	48844	.	-	.	ID=gene4409;Name=YPD4_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22125
NC_017155.1	Protein Homology	CDS	48665	48844	.	-	0	ID=cds4314;Parent=gene4409;Dbxref=Genbank:WP_002228796.1;Name=WP_002228796.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228796.1;transl_table=11
NC_017155.1	RefSeq	gene	48885	49160	.	-	.	ID=gene4410;Name=YPD4_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22130
NC_017155.1	Protein Homology	CDS	48885	49160	.	-	0	ID=cds4315;Parent=gene4410;Dbxref=Genbank:WP_002228797.1;Name=WP_002228797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228797.1;transl_table=11
NC_017155.1	RefSeq	gene	49228	49638	.	-	.	ID=gene4411;Name=YPD4_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22135;old_locus_tag=YPD4_pMT0043
NC_017155.1	Protein Homology	CDS	49228	49638	.	-	0	ID=cds4316;Parent=gene4411;Dbxref=Genbank:WP_002222869.1;Name=WP_002222869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222869.1;transl_table=11
NC_017155.1	RefSeq	gene	49622	49993	.	-	.	ID=gene4412;Name=YPD4_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22140;old_locus_tag=YPD4_pMT0044
NC_017155.1	Protein Homology	CDS	49622	49993	.	-	0	ID=cds4317;Parent=gene4412;Dbxref=Genbank:WP_002222868.1;Name=WP_002222868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222868.1;transl_table=11
NC_017155.1	RefSeq	gene	50147	50977	.	-	.	ID=gene4413;Name=YPD4_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22145;old_locus_tag=YPD4_pMT0045
NC_017155.1	Protein Homology	CDS	50147	50977	.	-	0	ID=cds4318;Parent=gene4413;Dbxref=Genbank:WP_002222866.1;Name=WP_002222866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222866.1;transl_table=11
NC_017155.1	RefSeq	gene	50981	51181	.	-	.	ID=gene4414;Name=YPD4_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22150
NC_017155.1	Protein Homology	CDS	50981	51181	.	-	0	ID=cds4319;Parent=gene4414;Dbxref=Genbank:WP_002213439.1;Name=WP_002213439.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213439.1;transl_table=11
NC_017155.1	RefSeq	gene	51272	52348	.	-	.	ID=gene4415;Name=YPD4_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22155;old_locus_tag=YPD4_pMT0046
NC_017155.1	Protein Homology	CDS	51272	52348	.	-	0	ID=cds4320;Parent=gene4415;Dbxref=Genbank:WP_002213437.1;Name=WP_002213437.1;gbkey=CDS;product=recombinase;protein_id=WP_002213437.1;transl_table=11
NC_017155.1	RefSeq	gene	52351	52617	.	-	.	ID=gene4416;Name=YPD4_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22160
NC_017155.1	Protein Homology	CDS	52351	52617	.	-	0	ID=cds4321;Parent=gene4416;Dbxref=Genbank:WP_000920226.1;Name=WP_000920226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000920226.1;transl_table=11
NC_017155.1	RefSeq	gene	52617	53546	.	-	.	ID=gene4417;Name=YPD4_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22165;old_locus_tag=YPD4_pMT0047
NC_017155.1	Protein Homology	CDS	52617	53546	.	-	0	ID=cds4322;Parent=gene4417;Dbxref=Genbank:WP_014462193.1;Name=WP_014462193.1;gbkey=CDS;product=exonuclease;protein_id=WP_014462193.1;transl_table=11
NC_017155.1	RefSeq	gene	53620	54648	.	-	.	ID=gene4418;Name=YPD4_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22170;old_locus_tag=YPD4_pMT0048
NC_017155.1	Protein Homology	CDS	53620	54648	.	-	0	ID=cds4323;Parent=gene4418;Dbxref=Genbank:WP_002213132.1;Name=WP_002213132.1;gbkey=CDS;product=regulator;protein_id=WP_002213132.1;transl_table=11
NC_017155.1	RefSeq	gene	54768	55199	.	-	.	ID=gene4419;Name=YPD4_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22175;old_locus_tag=YPD4_pMT0049
NC_017155.1	Protein Homology	CDS	54768	55199	.	-	0	ID=cds4324;Parent=gene4419;Dbxref=Genbank:WP_002213135.1;Name=WP_002213135.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213135.1;transl_table=11
NC_017155.1	RefSeq	gene	55420	55671	.	+	.	ID=gene4420;Name=YPD4_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22180
NC_017155.1	Protein Homology	CDS	55420	55671	.	+	0	ID=cds4325;Parent=gene4420;Dbxref=Genbank:WP_002215095.1;Name=WP_002215095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215095.1;transl_table=11
NC_017155.1	RefSeq	gene	55744	56307	.	+	.	ID=gene4421;Name=YPD4_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22185;old_locus_tag=YPD4_pMT0050
NC_017155.1	Protein Homology	CDS	55744	56307	.	+	0	ID=cds4326;Parent=gene4421;Dbxref=Genbank:WP_002213141.1;Name=WP_002213141.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002213141.1;transl_table=11
NC_017155.1	RefSeq	gene	56337	56780	.	-	.	ID=gene4422;Name=YPD4_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22190;old_locus_tag=YPD4_pMT0051
NC_017155.1	Protein Homology	CDS	56337	56780	.	-	0	ID=cds4327;Parent=gene4422;Dbxref=Genbank:WP_002213143.1;Name=WP_002213143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213143.1;transl_table=11
NC_017155.1	RefSeq	gene	56777	60301	.	-	.	ID=gene4423;Name=YPD4_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22195;old_locus_tag=YPD4_pMT0052
NC_017155.1	Protein Homology	CDS	56777	60301	.	-	0	ID=cds4328;Parent=gene4423;Dbxref=Genbank:WP_002221186.1;Name=WP_002221186.1;gbkey=CDS;product=DNA polymerase III subunit alpha;protein_id=WP_002221186.1;transl_table=11
NC_017155.1	RefSeq	gene	60482	61717	.	-	.	ID=gene4424;Name=YPD4_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22200;old_locus_tag=YPD4_pMT0053
NC_017155.1	Protein Homology	CDS	60482	61717	.	-	0	ID=cds4329;Parent=gene4424;Dbxref=Genbank:WP_002211767.1;Name=WP_002211767.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211767.1;transl_table=11
NC_017155.1	RefSeq	gene	61814	64180	.	-	.	ID=gene4425;Name=YPD4_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22205;old_locus_tag=YPD4_pMT0054
NC_017155.1	Protein Homology	CDS	61814	64180	.	-	0	ID=cds4330;Parent=gene4425;Dbxref=Genbank:WP_002211766.1;Name=WP_002211766.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211766.1;transl_table=11
NC_017155.1	RefSeq	gene	64290	64502	.	-	.	ID=gene4426;Name=YPD4_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22210
NC_017155.1	Protein Homology	CDS	64290	64502	.	-	0	ID=cds4331;Parent=gene4426;Dbxref=Genbank:WP_002228800.1;Name=WP_002228800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228800.1;transl_table=11
NC_017155.1	RefSeq	gene	64765	65151	.	+	.	ID=gene4427;Name=YPD4_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22215;old_locus_tag=YPD4_pMT0055
NC_017155.1	Protein Homology	CDS	64765	65151	.	+	0	ID=cds4332;Parent=gene4427;Dbxref=Genbank:WP_002228802.1;Name=WP_002228802.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228802.1;transl_table=11
NC_017155.1	RefSeq	gene	65146	66249	.	-	.	ID=gene4428;Name=YPD4_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22220;old_locus_tag=YPD4_pMT0056
NC_017155.1	Protein Homology	CDS	65146	66249	.	-	0	ID=cds4333;Parent=gene4428;Dbxref=Genbank:WP_002353208.1;Name=WP_002353208.1;gbkey=CDS;product=integrase;protein_id=WP_002353208.1;transl_table=11
NC_017155.1	RefSeq	gene	67009	67521	.	-	.	ID=gene4429;Name=YPD4_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22225;old_locus_tag=YPD4_pMT0057
NC_017155.1	Protein Homology	CDS	67009	67521	.	-	0	ID=cds4334;Parent=gene4429;Dbxref=Genbank:WP_002216410.1;Name=WP_002216410.1;gbkey=CDS;product=F1 capsule antigen;protein_id=WP_002216410.1;transl_table=11
NC_017155.1	RefSeq	gene	67602	70103	.	-	.	ID=gene4430;Name=YPD4_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22230;old_locus_tag=YPD4_pMT0058
NC_017155.1	Protein Homology	CDS	67602	70103	.	-	0	ID=cds4335;Parent=gene4430;Dbxref=Genbank:WP_002211763.1;Name=WP_002211763.1;gbkey=CDS;product=F1 capsule-anchoring protein;protein_id=WP_002211763.1;transl_table=11
NC_017155.1	RefSeq	gene	70128	70904	.	-	.	ID=gene4431;Name=YPD4_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22235;old_locus_tag=YPD4_pMT0059
NC_017155.1	Protein Homology	CDS	70128	70904	.	-	0	ID=cds4336;Parent=gene4431;Dbxref=Genbank:WP_002211762.1;Name=WP_002211762.1;gbkey=CDS;product=chaperone protein caf1M;protein_id=WP_002211762.1;transl_table=11
NC_017155.1	RefSeq	gene	71232	72137	.	+	.	ID=gene4432;Name=YPD4_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22240;old_locus_tag=YPD4_pMT0060
NC_017155.1	Protein Homology	CDS	71232	72137	.	+	0	ID=cds4337;Parent=gene4432;Dbxref=Genbank:WP_002211761.1;Name=WP_002211761.1;gbkey=CDS;product=F1 operon positive regulatory protein;protein_id=WP_002211761.1;transl_table=11
NC_017155.1	RefSeq	gene	72486	73694	.	+	.	ID=gene4433;Name=YPD4_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22245;old_locus_tag=YPD4_pMT0061
NC_017155.1	Protein Homology	CDS	72486	73694	.	+	0	ID=cds4338;Parent=gene4433;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11
NC_017155.1	RefSeq	gene	73824	74003	.	+	.	ID=gene4434;Name=YPD4_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22250
NC_017155.1	Protein Homology	CDS	73824	74003	.	+	0	ID=cds4339;Parent=gene4434;Dbxref=Genbank:WP_002216419.1;Name=WP_002216419.1;gbkey=CDS;product=DNA helicase;protein_id=WP_002216419.1;transl_table=11
NC_017155.1	RefSeq	gene	74163	75185	.	+	.	ID=gene4435;Name=YPD4_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22255;old_locus_tag=YPD4_pMT0062
NC_017155.1	Protein Homology	CDS	74163	75185	.	+	0	ID=cds4340;Parent=gene4435;Dbxref=Genbank:WP_002211760.1;Name=WP_002211760.1;gbkey=CDS;product=transposase;protein_id=WP_002211760.1;transl_table=11
NC_017155.1	RefSeq	gene	75384	75701	.	-	.	ID=gene4436;Name=YPD4_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22260;old_locus_tag=YPD4_pMT0063
NC_017155.1	Protein Homology	CDS	75384	75701	.	-	0	ID=cds4341;Parent=gene4436;Dbxref=Genbank:WP_002216421.1;Name=WP_002216421.1;gbkey=CDS;product=transposase;protein_id=WP_002216421.1;transl_table=11
NC_017155.1	RefSeq	gene	75881	76252	.	-	.	ID=gene4437;Name=YPD4_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22265
NC_017155.1	Protein Homology	CDS	75881	76252	.	-	0	ID=cds4342;Parent=gene4437;Dbxref=Genbank:WP_002228772.1;Name=WP_002228772.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228772.1;transl_table=11
NC_017155.1	RefSeq	gene	76167	76475	.	-	.	ID=gene4438;Name=YPD4_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22270
NC_017155.1	Protein Homology	CDS	76167	76475	.	-	0	ID=cds4343;Parent=gene4438;Dbxref=Genbank:WP_002228773.1;Name=WP_002228773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228773.1;transl_table=11
NC_017155.1	RefSeq	gene	76561	77016	.	+	.	ID=gene4439;Name=YPD4_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22275;old_locus_tag=YPD4_pMT0064
NC_017155.1	Protein Homology	CDS	76561	77016	.	+	0	ID=cds4344;Parent=gene4439;Dbxref=Genbank:WP_002353217.1;Name=WP_002353217.1;gbkey=CDS;product=reverse transcriptase;protein_id=WP_002353217.1;transl_table=11
NC_017155.1	RefSeq	gene	77261	79024	.	-	.	ID=gene4440;Name=YPD4_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22280;old_locus_tag=YPD4_pMT0065
NC_017155.1	Protein Homology	CDS	77261	79024	.	-	0	ID=cds4345;Parent=gene4440;Dbxref=Genbank:WP_002211758.1;Name=WP_002211758.1;gbkey=CDS;product=phospholipase D;protein_id=WP_002211758.1;transl_table=11
NC_017155.1	RefSeq	gene	79102	79590	.	-	.	ID=gene4441;Name=YPD4_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22285;old_locus_tag=YPD4_pMT0066
NC_017155.1	Protein Homology	CDS	79102	79590	.	-	0	ID=cds4346;Parent=gene4441;Dbxref=Genbank:WP_002211757.1;Name=WP_002211757.1;gbkey=CDS;product=phospholipase D;protein_id=WP_002211757.1;transl_table=11
NC_017155.1	RefSeq	gene	80329	80604	.	+	.	ID=gene4442;Name=YPD4_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22290
NC_017155.1	Protein Homology	CDS	80329	80604	.	+	0	ID=cds4347;Parent=gene4442;Dbxref=Genbank:WP_002211756.1;Name=WP_002211756.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211756.1;transl_table=11
NC_017155.1	RefSeq	gene	80627	81568	.	-	.	ID=gene4443;Name=YPD4_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22295;old_locus_tag=YPD4_pMT0067
NC_017155.1	Protein Homology	CDS	80627	81568	.	-	0	ID=cds4348;Parent=gene4443;Dbxref=Genbank:WP_002215065.1;Name=WP_002215065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215065.1;transl_table=11
NC_017155.1	RefSeq	gene	81634	82254	.	-	.	ID=gene4444;Name=YPD4_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22300;old_locus_tag=YPD4_pMT0068
NC_017155.1	Protein Homology	CDS	81634	82254	.	-	0	ID=cds4349;Parent=gene4444;Dbxref=Genbank:WP_002211754.1;Name=WP_002211754.1;gbkey=CDS;product=serine recombinase;protein_id=WP_002211754.1;transl_table=11
NC_017155.1	RefSeq	gene	82454	82780	.	-	.	ID=gene4445;Name=YPD4_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22305
NC_017155.1	Protein Homology	CDS	82454	82780	.	-	0	ID=cds4350;Parent=gene4445;Dbxref=Genbank:WP_002215068.1;Name=WP_002215068.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002215068.1;transl_table=11
NC_017155.1	RefSeq	gene	82780	83007	.	-	.	ID=gene4446;Name=YPD4_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22310
NC_017155.1	Protein Homology	CDS	82780	83007	.	-	0	ID=cds4351;Parent=gene4446;Dbxref=Genbank:WP_002211753.1;Name=WP_002211753.1;gbkey=CDS;product=prevent-host-death protein;protein_id=WP_002211753.1;transl_table=11
NC_017155.1	RefSeq	gene	83309	84514	.	+	.	ID=gene4447;Name=YPD4_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22315;old_locus_tag=YPD4_pMT0069
NC_017155.1	Protein Homology	CDS	83309	84514	.	+	0	ID=cds4352;Parent=gene4447;Dbxref=Genbank:WP_002211752.1;Name=WP_002211752.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002211752.1;transl_table=11
NC_017155.1	RefSeq	gene	84511	85482	.	+	.	ID=gene4448;Name=YPD4_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22320;old_locus_tag=YPD4_pMT0070
NC_017155.1	Protein Homology	CDS	84511	85482	.	+	0	ID=cds4353;Parent=gene4448;Dbxref=Genbank:WP_002215070.1;Name=WP_002215070.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002215070.1;transl_table=11
NC_017155.1	RefSeq	gene	85861	87258	.	+	.	ID=gene4449;Name=YPD4_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22325;old_locus_tag=YPD4_pMT0071
NC_017155.1	Protein Homology	CDS	85861	87258	.	+	0	ID=cds4354;Parent=gene4449;Dbxref=Genbank:WP_002228775.1;Name=WP_002228775.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228775.1;transl_table=11
NC_017155.1	RefSeq	gene	87420	87620	.	-	.	ID=gene4450;Name=YPD4_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22330
NC_017155.1	Protein Homology	CDS	87420	87620	.	-	0	ID=cds4355;Parent=gene4450;Dbxref=Genbank:WP_002211750.1;Name=WP_002211750.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211750.1;transl_table=11
NC_017155.1	RefSeq	gene	88121	88798	.	+	.	ID=gene4451;Name=YPD4_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22335;old_locus_tag=YPD4_pMT0072
NC_017155.1	Protein Homology	CDS	88121	88798	.	+	0	ID=cds4356;Parent=gene4451;Dbxref=Genbank:WP_002211749.1;Name=WP_002211749.1;gbkey=CDS;product=methylase;protein_id=WP_002211749.1;transl_table=11
NC_017155.1	RefSeq	gene	88798	89019	.	+	.	ID=gene4452;Name=YPD4_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22340
NC_017155.1	Protein Homology	CDS	88798	89019	.	+	0	ID=cds4357;Parent=gene4452;Dbxref=Genbank:WP_002211748.1;Name=WP_002211748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211748.1;transl_table=11
NC_017155.1	RefSeq	gene	89030	89449	.	+	.	ID=gene4453;Name=YPD4_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22345;old_locus_tag=YPD4_pMT0073
NC_017155.1	Protein Homology	CDS	89030	89449	.	+	0	ID=cds4358;Parent=gene4453;Dbxref=Genbank:WP_002215082.1;Name=WP_002215082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215082.1;transl_table=11
NC_017155.1	RefSeq	gene	89503	90282	.	+	.	ID=gene4454;Name=YPD4_RS22350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS22350;pseudo=true
NC_017155.1	Protein Homology	CDS	89503	90282	.	+	0	ID=cds4359;Parent=gene4454;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:90019..90021%2Caa:Other);transl_table=11
NC_017155.1	RefSeq	gene	90681	91187	.	+	.	ID=gene4455;Name=YPD4_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22355;old_locus_tag=YPD4_pMT0075
NC_017155.1	Protein Homology	CDS	90681	91187	.	+	0	ID=cds4360;Parent=gene4455;Dbxref=Genbank:WP_002211746.1;Name=WP_002211746.1;gbkey=CDS;product=antirestriction protein;protein_id=WP_002211746.1;transl_table=11
NC_017155.1	RefSeq	gene	91900	92130	.	+	.	ID=gene4456;Name=YPD4_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22360
NC_017155.1	Protein Homology	CDS	91900	92130	.	+	0	ID=cds4361;Parent=gene4456;Dbxref=Genbank:WP_002211745.1;Name=WP_002211745.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211745.1;transl_table=11
NC_017155.1	RefSeq	gene	92203	94212	.	+	.	ID=gene4457;Name=YPD4_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22365;old_locus_tag=YPD4_pMT0076
NC_017155.1	Protein Homology	CDS	92203	94212	.	+	0	ID=cds4362;Parent=gene4457;Dbxref=Genbank:WP_002211744.1;Name=WP_002211744.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211744.1;transl_table=11
##sequence-region NC_017156.1 1 9611
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=637382
NC_017156.1	RefSeq	region	1	9611	.	+	.	ID=id381;Dbxref=taxon:637382;Is_circular=true;Name=pPCY1;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pPCY1;strain=D106004
NC_017156.1	RefSeq	gene	87	1109	.	+	.	ID=gene4458;Name=YPD4_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22375;old_locus_tag=YPD4_pPCP0001
NC_017156.1	Protein Homology	CDS	87	1109	.	+	0	ID=cds4363;Parent=gene4458;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11
NC_017156.1	RefSeq	gene	1109	1888	.	+	.	ID=gene4459;Name=YPD4_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22380;old_locus_tag=YPD4_pPCP0002
NC_017156.1	Protein Homology	CDS	1109	1888	.	+	0	ID=cds4364;Parent=gene4459;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11
NC_017156.1	RefSeq	gene	2925	3119	.	+	.	ID=gene4460;Name=YPD4_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22385
NC_017156.1	Protein Homology	CDS	2925	3119	.	+	0	ID=cds4365;Parent=gene4460;Dbxref=Genbank:WP_002213433.1;Name=WP_002213433.1;gbkey=CDS;product=rop protein;protein_id=WP_002213433.1;transl_table=11
NC_017156.1	RefSeq	gene	4355	4781	.	+	.	ID=gene4461;Name=YPD4_RS22390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPD4_RS22390;old_locus_tag=YPD4_pPCP0004;pseudo=true
NC_017156.1	Protein Homology	CDS	4355	4781	.	+	0	ID=cds4366;Parent=gene4461;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pesticin immunity protein;pseudo=true;transl_table=11
NC_017156.1	RefSeq	gene	4816	5889	.	-	.	ID=gene4462;Name=YPD4_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22395;old_locus_tag=YPD4_pPCP0005
NC_017156.1	Protein Homology	CDS	4816	5889	.	-	0	ID=cds4367;Parent=gene4462;Dbxref=Genbank:WP_002218509.1;Name=WP_002218509.1;gbkey=CDS;product=peptidase;protein_id=WP_002218509.1;transl_table=11
NC_017156.1	RefSeq	gene	6118	6423	.	+	.	ID=gene4463;Name=YPD4_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22400
NC_017156.1	Protein Homology	CDS	6118	6423	.	+	0	ID=cds4368;Parent=gene4463;Dbxref=Genbank:WP_002221218.1;Name=WP_002221218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221218.1;transl_table=11
NC_017156.1	RefSeq	gene	6666	7604	.	+	.	ID=gene4464;Name=YPD4_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22405;old_locus_tag=YPD4_pPCP0007
NC_017156.1	Protein Homology	CDS	6666	7604	.	+	0	ID=cds4369;Parent=gene4464;Dbxref=Genbank:WP_002218234.1;Name=WP_002218234.1;gbkey=CDS;product=coagulase/fibrinolysin;protein_id=WP_002218234.1;transl_table=11
NC_017156.1	RefSeq	gene	7791	8090	.	-	.	ID=gene4465;Name=YPD4_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22410;old_locus_tag=YPD4_pPCP0008
NC_017156.1	Protein Homology	CDS	7791	8090	.	-	0	ID=cds4370;Parent=gene4465;Dbxref=Genbank:WP_002213446.1;Name=WP_002213446.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213446.1;transl_table=11
NC_017156.1	RefSeq	gene	8090	8431	.	-	.	ID=gene4466;Name=YPD4_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22415;old_locus_tag=YPD4_pPCP0009
NC_017156.1	Protein Homology	CDS	8090	8431	.	-	0	ID=cds4371;Parent=gene4466;Dbxref=Genbank:WP_002225538.1;Name=WP_002225538.1;gbkey=CDS;product=toxin RelE;protein_id=WP_002225538.1;transl_table=11
NC_017156.1	RefSeq	gene	9134	9349	.	-	.	ID=gene4467;Name=YPD4_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPD4_RS22420
NC_017156.1	Protein Homology	CDS	9134	9349	.	-	0	ID=cds4372;Parent=gene4467;Dbxref=Genbank:WP_002213461.1;Name=WP_002213461.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213461.1;transl_table=11
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