locus-tag class description CH61_RS00025 PF12631 MnmE helical domain CH61_RS00025 PF01926 50S ribosome-binding GTPase CH61_RS00025 PF10396 GTP-binding protein TrmE N-terminus CH61_RS00250 PF02378 Phosphotransferase system, EIIC CH61_RS00250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH61_RS00250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH61_RS00260 PF08125 Mannitol dehydrogenase C-terminal domain CH61_RS00260 PF01232 Mannitol dehydrogenase Rossmann domain CH61_RS00300 PF00672 HAMP domain CH61_RS00300 PF16591 Helical bimodular sensor domain CH61_RS00300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH61_RS00360 PF12390 Selenocysteine synthase N terminal CH61_RS00360 PF03841 L-seryl-tRNA selenium transferase CH61_RS00455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS00455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH61_RS00485 PF14849 YidC periplasmic domain CH61_RS00485 PF02096 60Kd inner membrane protein CH61_RS00770 PF12241 Trans-2-enoyl-CoA reductase catalytic region CH61_RS00770 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CH61_RS00770 PF07055 Enoyl reductase FAD binding domain CH61_RS00775 PF10396 GTP-binding protein TrmE N-terminus CH61_RS00775 PF12631 MnmE helical domain CH61_RS00775 PF01926 50S ribosome-binding GTPase CH61_RS00780 PF14849 YidC periplasmic domain CH61_RS00780 PF02096 60Kd inner membrane protein CH61_RS00785 PF00825 Ribonuclease P CH61_RS00790 PF00468 Ribosomal protein L34 CH61_RS00795 PF08299 Bacterial dnaA protein helix-turn-helix CH61_RS00795 PF00308 Bacterial dnaA protein CH61_RS00795 PF11638 DnaA N-terminal domain CH61_RS00800 PF02767 DNA polymerase III beta subunit, central domain CH61_RS00800 PF00712 DNA polymerase III beta subunit, N-terminal domain CH61_RS00800 PF02768 DNA polymerase III beta subunit, C-terminal domain CH61_RS00805 PF02463 RecF/RecN/SMC N terminal domain CH61_RS00810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS00810 PF18053 DNA gyrase B subunit insert domain CH61_RS00810 PF00986 DNA gyrase B subunit, carboxyl terminus CH61_RS00810 PF00204 DNA gyrase B CH61_RS00810 PF01751 Toprim domain CH61_RS00820 PF13333 Integrase core domain CH61_RS00820 PF00665 Integrase core domain CH61_RS00820 PF13276 HTH-like domain CH61_RS00830 PF02423 Ornithine cyclodeaminase/mu-crystallin family CH61_RS00835 PF13291 ACT domain CH61_RS00835 PF00291 Pyridoxal-phosphate dependent enzyme CH61_RS00840 PF12566 Protein of unknown function (DUF3748) CH61_RS00840 PF07676 WD40-like Beta Propeller Repeat CH61_RS00845 PF12566 Protein of unknown function (DUF3748) CH61_RS00845 PF07676 WD40-like Beta Propeller Repeat CH61_RS00850 PF07119 Protein of unknown function (DUF1375) CH61_RS00855 PF00011 Hsp20/alpha crystallin family CH61_RS00860 PF00011 Hsp20/alpha crystallin family CH61_RS00865 PF02080 TrkA-C domain CH61_RS00865 PF06826 Predicted Permease Membrane Region CH61_RS00870 PF00155 Aminotransferase class I and II CH61_RS00880 PF00128 Alpha amylase, catalytic domain CH61_RS00885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH61_RS00885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH61_RS00895 PF13488 Glycine zipper CH61_RS00895 PF00691 OmpA family CH61_RS00905 PF03352 Methyladenine glycosylase CH61_RS00910 PF02091 Glycyl-tRNA synthetase alpha subunit CH61_RS00915 PF02092 Glycyl-tRNA synthetase beta subunit CH61_RS00915 PF05746 DALR anticodon binding domain CH61_RS00920 PF11254 Protein of unknown function (DUF3053) CH61_RS00925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH61_RS00925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH61_RS00925 PF02378 Phosphotransferase system, EIIC CH61_RS00930 PF01232 Mannitol dehydrogenase Rossmann domain CH61_RS00930 PF08125 Mannitol dehydrogenase C-terminal domain CH61_RS00935 PF05068 Mannitol repressor CH61_RS00940 PF10928 Protein of unknown function (DUF2810) CH61_RS00955 PF02203 Tar ligand binding domain homologue CH61_RS00955 PF00672 HAMP domain CH61_RS00955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH61_RS00960 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CH61_RS00960 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CH61_RS00965 PF02634 FdhD/NarQ family CH61_RS00970 PF00384 Molybdopterin oxidoreductase CH61_RS00970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH61_RS00970 PF01568 Molydopterin dinucleotide binding domain CH61_RS00975 PF01568 Molydopterin dinucleotide binding domain CH61_RS00975 PF00384 Molybdopterin oxidoreductase CH61_RS00975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH61_RS00980 PF09163 Formate dehydrogenase N, transmembrane CH61_RS00980 PF13247 4Fe-4S dicluster domain CH61_RS00985 PF01292 Prokaryotic cytochrome b561 CH61_RS00990 PF04216 Protein involved in formate dehydrogenase formation CH61_RS00995 PF03841 L-seryl-tRNA selenium transferase CH61_RS00995 PF12390 Selenocysteine synthase N terminal CH61_RS01000 PF00009 Elongation factor Tu GTP binding domain CH61_RS01000 PF09107 Elongation factor SelB, winged helix CH61_RS01000 PF09106 Elongation factor SelB, winged helix CH61_RS01000 PF03144 Elongation factor Tu domain 2 CH61_RS01005 PF00009 Elongation factor Tu GTP binding domain CH61_RS01005 PF09106 Elongation factor SelB, winged helix CH61_RS01005 PF09107 Elongation factor SelB, winged helix CH61_RS01005 PF03144 Elongation factor Tu domain 2 CH61_RS01010 PF01526 Tn3 transposase DDE domain CH61_RS01010 PF13700 Domain of unknown function (DUF4158) CH61_RS01035 PF07690 Major Facilitator Superfamily CH61_RS01040 PF13276 HTH-like domain CH61_RS01040 PF13333 Integrase core domain CH61_RS01040 PF00665 Integrase core domain CH61_RS01055 PF01757 Acyltransferase family CH61_RS01060 PF00419 Fimbrial protein CH61_RS01075 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS01075 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS01085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH61_RS01085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS01095 PF13407 Periplasmic binding protein domain CH61_RS01100 PF00005 ABC transporter CH61_RS01105 PF02653 Branched-chain amino acid transport system / permease component CH61_RS01110 PF12833 Helix-turn-helix domain CH61_RS01115 PF14659 Phage integrase, N-terminal SAM-like domain CH61_RS01115 PF00589 Phage integrase family CH61_RS01115 PF13356 Arm DNA-binding domain CH61_RS01125 PF04606 Ogr/Delta-like zinc finger CH61_RS01130 PF13737 Transposase DDE domain CH61_RS01135 PF13737 Transposase DDE domain CH61_RS01155 PF00005 ABC transporter CH61_RS01160 PF01032 FecCD transport family CH61_RS01165 PF01032 FecCD transport family CH61_RS01170 PF01497 Periplasmic binding protein CH61_RS01185 PF00156 Phosphoribosyl transferase domain CH61_RS01190 PF00291 Pyridoxal-phosphate dependent enzyme CH61_RS01195 PF01175 Urocanase Rossmann-like domain CH61_RS01195 PF17391 Urocanase N-terminal domain CH61_RS01195 PF17392 Urocanase C-terminal domain CH61_RS01200 PF00221 Aromatic amino acid lyase CH61_RS01205 PF00324 Amino acid permease CH61_RS01210 PF12146 Serine aminopeptidase, S33 CH61_RS01215 PF00884 Sulfatase CH61_RS01215 PF08019 Phosphoethanolamine transferase EptA/EptB CH61_RS01220 PF00196 Bacterial regulatory proteins, luxR family CH61_RS01220 PF00072 Response regulator receiver domain CH61_RS01225 PF07730 Histidine kinase CH61_RS01225 PF05231 MASE1 CH61_RS01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS01230 PF02796 Helix-turn-helix domain of resolvase CH61_RS01230 PF00665 Integrase core domain CH61_RS01235 PF00665 Integrase core domain CH61_RS01235 PF02796 Helix-turn-helix domain of resolvase CH61_RS01240 PF01695 IstB-like ATP binding protein CH61_RS01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS01245 PF07730 Histidine kinase CH61_RS01245 PF05231 MASE1 CH61_RS01250 PF07690 Major Facilitator Superfamily CH61_RS01260 PF05594 Haemagluttinin repeat CH61_RS01260 PF04829 Pre-toxin domain with VENN motif CH61_RS01260 PF13332 Hemagglutinin repeat CH61_RS01260 PF05860 haemagglutination activity domain CH61_RS01265 PF08479 POTRA domain, ShlB-type CH61_RS01265 PF17287 POTRA domain CH61_RS01265 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH61_RS01275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH61_RS01280 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS01285 PF12911 N-terminal TM domain of oligopeptide transport permease C CH61_RS01285 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS01290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH61_RS01290 PF00005 ABC transporter CH61_RS01295 PF00005 ABC transporter CH61_RS01295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH61_RS01300 PF01270 Glycosyl hydrolases family 8 CH61_RS01305 PF00990 Diguanylate cyclase, GGDEF domain CH61_RS01305 PF17154 Gammaproteobacterial periplasmic sensor domain CH61_RS01305 PF00672 HAMP domain CH61_RS01305 PF00563 EAL domain CH61_RS01310 PF06178 Oligogalacturonate-specific porin protein (KdgM) CH61_RS01315 PF06917 Periplasmic pectate lyase CH61_RS01325 PF00375 Sodium:dicarboxylate symporter family CH61_RS01330 PF05193 Peptidase M16 inactive domain CH61_RS01330 PF00675 Insulinase (Peptidase family M16) CH61_RS01335 PF00294 pfkB family carbohydrate kinase CH61_RS01340 PF01361 Tautomerase enzyme CH61_RS01345 PF00563 EAL domain CH61_RS01350 PF05170 AsmA family CH61_RS01355 PF02611 CDP-diacylglycerol pyrophosphatase CH61_RS01360 PF03631 Virulence factor BrkB CH61_RS01385 PF02595 Glycerate kinase family CH61_RS01390 PF02447 GntP family permease CH61_RS01395 PF05651 Putative sugar diacid recognition CH61_RS01395 PF17853 GGDEF-like domain CH61_RS01395 PF13556 PucR C-terminal helix-turn-helix domain CH61_RS01400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH61_RS01400 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS01405 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CH61_RS01410 PF01432 Peptidase family M3 CH61_RS01415 PF04445 Putative SAM-dependent methyltransferase CH61_RS01420 PF00413 Matrixin CH61_RS01420 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CH61_RS01420 PF08548 Peptidase M10 serralysin C terminal CH61_RS01425 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CH61_RS01425 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CH61_RS01430 PF00582 Universal stress protein family CH61_RS01435 PF10625 Universal stress protein B (UspB) CH61_RS01440 PF01797 Transposase IS200 like CH61_RS01450 PF01384 Phosphate transporter family CH61_RS01460 PF00072 Response regulator receiver domain CH61_RS01460 PF13188 PAS domain CH61_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS01460 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS01460 PF08448 PAS fold CH61_RS01465 PF00005 ABC transporter CH61_RS01470 PF02653 Branched-chain amino acid transport system / permease component CH61_RS01475 PF13407 Periplasmic binding protein domain CH61_RS01485 PF01116 Fructose-bisphosphate aldolase class-II CH61_RS01495 PF00486 Transcriptional regulatory protein, C terminal CH61_RS01495 PF00072 Response regulator receiver domain CH61_RS01505 PF02678 Pirin CH61_RS01505 PF17954 Quercetinase C-terminal cupin domain CH61_RS01510 PF00356 Bacterial regulatory proteins, lacI family CH61_RS01510 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH61_RS01515 PF02447 GntP family permease CH61_RS01520 PF01202 Shikimate kinase CH61_RS01540 PF01914 MarC family integral membrane protein CH61_RS01545 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH61_RS01545 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH61_RS01570 PF11924 Inverse autotransporter, beta-domain CH61_RS01570 PF07979 Intimin C-type lectin domain CH61_RS01570 PF09134 Invasin, domain 3 CH61_RS01570 PF02369 Bacterial Ig-like domain (group 1) CH61_RS01575 PF07694 5TMR of 5TMR-LYT CH61_RS01575 PF06580 Histidine kinase CH61_RS01580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH61_RS01580 PF02806 Alpha amylase, C-terminal all-beta domain CH61_RS01580 PF00128 Alpha amylase, catalytic domain CH61_RS01585 PF00128 Alpha amylase, catalytic domain CH61_RS01585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH61_RS01585 PF18390 Glycogen debranching enzyme C-terminal domain CH61_RS01590 PF00483 Nucleotidyl transferase CH61_RS01595 PF00534 Glycosyl transferases group 1 CH61_RS01595 PF08323 Starch synthase catalytic domain CH61_RS01600 PF00343 Carbohydrate phosphorylase CH61_RS01605 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CH61_RS01605 PF01266 FAD dependent oxidoreductase CH61_RS01625 PF13333 Integrase core domain CH61_RS01625 PF00665 Integrase core domain CH61_RS01625 PF13276 HTH-like domain CH61_RS01635 PF02796 Helix-turn-helix domain of resolvase CH61_RS01635 PF00665 Integrase core domain CH61_RS01640 PF01695 IstB-like ATP binding protein CH61_RS01645 PF00311 Phosphoenolpyruvate carboxylase CH61_RS01650 PF07687 Peptidase dimerisation domain CH61_RS01650 PF01546 Peptidase family M20/M25/M40 CH61_RS01655 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH61_RS01655 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH61_RS01660 PF00696 Amino acid kinase family CH61_RS01665 PF14698 Argininosuccinate lyase C-terminal CH61_RS01665 PF00206 Lyase CH61_RS01675 PF00593 TonB dependent receptor CH61_RS01675 PF07715 TonB-dependent Receptor Plug Domain CH61_RS01685 PF00005 ABC transporter CH61_RS01685 PF00664 ABC transporter transmembrane region CH61_RS01690 PF00529 HlyD membrane-fusion protein of T1SS CH61_RS01695 PF03544 Gram-negative bacterial TonB protein C-terminal CH61_RS01700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH61_RS01700 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS01705 PF00462 Glutaredoxin CH61_RS01705 PF08534 Redoxin CH61_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS01710 PF03466 LysR substrate binding domain CH61_RS01715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH61_RS01715 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS01720 PF00440 Bacterial regulatory proteins, tetR family CH61_RS01725 PF07226 Protein of unknown function (DUF1422) CH61_RS01730 PF05958 tRNA (Uracil-5-)-methyltransferase CH61_RS01740 PF00593 TonB dependent receptor CH61_RS01740 PF07715 TonB-dependent Receptor Plug Domain CH61_RS01745 PF01177 Asp/Glu/Hydantoin racemase CH61_RS01785 PF13407 Periplasmic binding protein domain CH61_RS01790 PF00005 ABC transporter CH61_RS01795 PF02653 Branched-chain amino acid transport system / permease component CH61_RS01800 PF02653 Branched-chain amino acid transport system / permease component CH61_RS01805 PF03466 LysR substrate binding domain CH61_RS01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS01810 PF04219 Protein of unknown function, DUF CH61_RS01815 PF13335 Magnesium chelatase, subunit ChlI C-terminal CH61_RS01815 PF01078 Magnesium chelatase, subunit ChlI CH61_RS01820 PF00205 Thiamine pyrophosphate enzyme, central domain CH61_RS01820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH61_RS01820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH61_RS01830 PF01063 Amino-transferase class IV CH61_RS01835 PF00920 Dehydratase family CH61_RS01840 PF00291 Pyridoxal-phosphate dependent enzyme CH61_RS01840 PF00585 C-terminal regulatory domain of Threonine dehydratase CH61_RS01875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS01875 PF03466 LysR substrate binding domain CH61_RS01880 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CH61_RS01880 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CH61_RS01905 PF01320 Colicin immunity protein / pyocin immunity protein CH61_RS01915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS01915 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS01925 PF00577 Outer membrane usher protein CH61_RS01925 PF13953 PapC C-terminal domain CH61_RS01925 PF13954 PapC N-terminal domain CH61_RS01930 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS01930 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS01945 PF00872 Transposase, Mutator family CH61_RS01965 PF13361 UvrD-like helicase C-terminal domain CH61_RS01965 PF00580 UvrD/REP helicase N-terminal domain CH61_RS01970 PF02541 Ppx/GppA phosphatase family CH61_RS01975 PF02541 Ppx/GppA phosphatase family CH61_RS01980 PF00271 Helicase conserved C-terminal domain CH61_RS01980 PF00270 DEAD/DEAH box helicase CH61_RS01985 PF00085 Thioredoxin CH61_RS01990 PF07497 Rho termination factor, RNA-binding domain CH61_RS01990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH61_RS01990 PF07498 Rho termination factor, N-terminal domain CH61_RS01995 PF00953 Glycosyl transferase family 4 CH61_RS02000 PF02706 Chain length determinant protein CH61_RS02005 PF02350 UDP-N-acetylglucosamine 2-epimerase CH61_RS02010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CH61_RS02010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CH61_RS02010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CH61_RS02015 PF16363 GDP-mannose 4,6 dehydratase CH61_RS02020 PF00483 Nucleotidyl transferase CH61_RS02030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH61_RS02035 PF01943 Polysaccharide biosynthesis protein CH61_RS02040 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CH61_RS02045 PF06899 WzyE protein, O-antigen assembly polymerase CH61_RS02050 PF03808 Glycosyl transferase WecB/TagA/CpsF family CH61_RS02055 PF00324 Amino acid permease CH61_RS02080 PF01797 Transposase IS200 like CH61_RS02085 PF07219 HemY protein N-terminus CH61_RS02085 PF07719 Tetratricopeptide repeat CH61_RS02090 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CH61_RS02095 PF02602 Uroporphyrinogen-III synthase HemD CH61_RS02100 PF03900 Porphobilinogen deaminase, C-terminal domain CH61_RS02100 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CH61_RS02105 PF12633 Adenylate cyclase NT domain CH61_RS02105 PF01295 Adenylate cyclase, class-I CH61_RS02110 PF01491 Frataxin-like domain CH61_RS02115 PF13627 Prokaryotic lipoprotein-attachment site CH61_RS02120 PF01678 Diaminopimelate epimerase CH61_RS02125 PF04340 Protein of unknown function, DUF484 CH61_RS02130 PF02899 Phage integrase, N-terminal SAM-like domain CH61_RS02130 PF00589 Phage integrase family CH61_RS02135 PF13419 Haloacid dehalogenase-like hydrolase CH61_RS02140 PF13361 UvrD-like helicase C-terminal domain CH61_RS02140 PF00580 UvrD/REP helicase N-terminal domain CH61_RS02155 PF09370 Phosphoenolpyruvate hydrolase-like CH61_RS02160 PF01544 CorA-like Mg2+ transporter protein CH61_RS02165 PF00892 EamA-like transporter family CH61_RS02170 PF03061 Thioesterase superfamily CH61_RS02175 PF02253 Phospholipase A1 CH61_RS02180 PF00270 DEAD/DEAH box helicase CH61_RS02180 PF00271 Helicase conserved C-terminal domain CH61_RS02180 PF00570 HRDC domain CH61_RS02180 PF09382 RQC domain CH61_RS02180 PF16124 RecQ zinc-binding CH61_RS02185 PF01810 LysE type translocator CH61_RS02190 PF01810 LysE type translocator CH61_RS02195 PF12146 Serine aminopeptidase, S33 CH61_RS02210 PF03009 Glycerophosphoryl diester phosphodiesterase family CH61_RS02220 PF01266 FAD dependent oxidoreductase CH61_RS02220 PF04324 BFD-like [2Fe-2S] binding domain CH61_RS02225 PF00890 FAD binding domain CH61_RS02230 PF02754 Cysteine-rich domain CH61_RS02230 PF13183 4Fe-4S dicluster domain CH61_RS02235 PF08786 DcrB CH61_RS02240 PF02592 Putative vitamin uptake transporter CH61_RS02245 PF01206 Sulfurtransferase TusA CH61_RS02250 PF00403 Heavy-metal-associated domain CH61_RS02255 PF07947 YhhN family CH61_RS02270 PF06611 Protein of unknown function (DUF1145) CH61_RS02285 PF02881 SRP54-type protein, helical bundle domain CH61_RS02285 PF00448 SRP54-type protein, GTPase domain CH61_RS02285 PF02881 SRP54-type protein, helical bundle domain CH61_RS02285 PF00448 SRP54-type protein, GTPase domain CH61_RS02290 PF00005 ABC transporter CH61_RS02295 PF18075 FtsX extracellular domain CH61_RS02295 PF02687 FtsX-like permease family CH61_RS02300 PF04545 Sigma-70, region 4 CH61_RS02300 PF00140 Sigma-70 factor, region 1.2 CH61_RS02300 PF04542 Sigma-70 region 2 CH61_RS02310 PF01797 Transposase IS200 like CH61_RS02315 PF12568 Acetyltransferase (GNAT) domain, PanZ CH61_RS02320 PF13458 Periplasmic binding protein CH61_RS02325 PF02653 Branched-chain amino acid transport system / permease component CH61_RS02330 PF11862 Domain of unknown function (DUF3382) CH61_RS02330 PF02653 Branched-chain amino acid transport system / permease component CH61_RS02335 PF00005 ABC transporter CH61_RS02335 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH61_RS02340 PF00005 ABC transporter CH61_RS02380 PF13416 Bacterial extracellular solute-binding protein CH61_RS02385 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS02390 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS02395 PF17912 MalK OB fold domain CH61_RS02395 PF00005 ABC transporter CH61_RS02400 PF03009 Glycerophosphoryl diester phosphodiesterase family CH61_RS02405 PF03547 Membrane transport protein CH61_RS02410 PF00892 EamA-like transporter family CH61_RS02415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS02415 PF03466 LysR substrate binding domain CH61_RS02420 PF08267 Cobalamin-independent synthase, N-terminal domain CH61_RS02420 PF01717 Cobalamin-independent synthase, Catalytic domain CH61_RS02425 PF01738 Dienelactone hydrolase family CH61_RS02430 PF01048 Phosphorylase superfamily CH61_RS02440 PF13722 5TM C-terminal transporter carbon starvation CstA CH61_RS02440 PF02554 Carbon starvation protein CstA CH61_RS02445 PF09335 SNARE associated Golgi protein CH61_RS02450 PF02646 RmuC family CH61_RS02455 PF01209 ubiE/COQ5 methyltransferase family CH61_RS02460 PF02036 SCP-2 sterol transfer family CH61_RS02465 PF03109 ABC1 family CH61_RS02470 PF02416 mttA/Hcf106 family CH61_RS02480 PF00902 Sec-independent protein translocase protein (TatC) CH61_RS02485 PF01026 TatD related DNase CH61_RS02490 PF02796 Helix-turn-helix domain of resolvase CH61_RS02490 PF00665 Integrase core domain CH61_RS02495 PF01695 IstB-like ATP binding protein CH61_RS02500 PF01026 TatD related DNase CH61_RS02505 PF00490 Delta-aminolevulinic acid dehydratase CH61_RS02510 PF02357 Transcription termination factor nusG CH61_RS02515 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CH61_RS02520 PF00970 Oxidoreductase FAD-binding domain CH61_RS02520 PF00175 Oxidoreductase NAD-binding domain CH61_RS02525 PF02803 Thiolase, C-terminal domain CH61_RS02525 PF00108 Thiolase, N-terminal domain CH61_RS02530 PF00378 Enoyl-CoA hydratase/isomerase CH61_RS02530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CH61_RS02530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CH61_RS02535 PF00557 Metallopeptidase family M24 CH61_RS02540 PF09186 Domain of unknown function (DUF1949) CH61_RS02540 PF01205 Uncharacterized protein family UPF0029 CH61_RS02545 PF01797 Transposase IS200 like CH61_RS02550 PF09186 Domain of unknown function (DUF1949) CH61_RS02550 PF01205 Uncharacterized protein family UPF0029 CH61_RS02555 PF02386 Cation transport protein CH61_RS02560 PF12724 Flavodoxin domain CH61_RS02595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CH61_RS02595 PF01565 FAD binding domain CH61_RS02600 PF03099 Biotin/lipoate A/B protein ligase family CH61_RS02600 PF02237 Biotin protein ligase C terminal domain CH61_RS02600 PF08279 HTH domain CH61_RS02605 PF00485 Phosphoribulokinase / Uridine kinase family CH61_RS02610 PF13673 Acetyltransferase (GNAT) domain CH61_RS02615 PF00665 Integrase core domain CH61_RS02615 PF02796 Helix-turn-helix domain of resolvase CH61_RS02620 PF01695 IstB-like ATP binding protein CH61_RS02625 PF01695 IstB-like ATP binding protein CH61_RS02650 PF00009 Elongation factor Tu GTP binding domain CH61_RS02650 PF03144 Elongation factor Tu domain 2 CH61_RS02650 PF03143 Elongation factor Tu C-terminal domain CH61_RS02655 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CH61_RS02660 PF02357 Transcription termination factor nusG CH61_RS02660 PF00467 KOW motif CH61_RS02665 PF03946 Ribosomal protein L11, N-terminal domain CH61_RS02665 PF00298 Ribosomal protein L11, RNA binding domain CH61_RS02670 PF00687 Ribosomal protein L1p/L10e family CH61_RS02675 PF00466 Ribosomal protein L10 CH61_RS02680 PF00542 Ribosomal protein L7/L12 C-terminal domain CH61_RS02680 PF16320 Ribosomal protein L7/L12 dimerisation domain CH61_RS02685 PF04560 RNA polymerase Rpb2, domain 7 CH61_RS02685 PF04561 RNA polymerase Rpb2, domain 2 CH61_RS02685 PF10385 RNA polymerase beta subunit external 1 domain CH61_RS02685 PF04565 RNA polymerase Rpb2, domain 3 CH61_RS02685 PF04563 RNA polymerase beta subunit CH61_RS02685 PF00562 RNA polymerase Rpb2, domain 6 CH61_RS02690 PF04997 RNA polymerase Rpb1, domain 1 CH61_RS02690 PF00623 RNA polymerase Rpb1, domain 2 CH61_RS02690 PF04983 RNA polymerase Rpb1, domain 3 CH61_RS02690 PF05000 RNA polymerase Rpb1, domain 4 CH61_RS02690 PF04998 RNA polymerase Rpb1, domain 5 CH61_RS02710 PF04055 Radical SAM superfamily CH61_RS02710 PF06968 Biotin and Thiamin Synthesis associated domain CH61_RS02715 PF05690 Thiazole biosynthesis protein ThiG CH61_RS02725 PF00899 ThiF family CH61_RS02730 PF02581 Thiamine monophosphate synthase CH61_RS02735 PF13667 ThiC-associated domain CH61_RS02735 PF01964 Radical SAM ThiC family CH61_RS02745 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CH61_RS02750 PF00293 NUDIX domain CH61_RS02750 PF09297 NADH pyrophosphatase zinc ribbon domain CH61_RS02760 PF01208 Uroporphyrinogen decarboxylase (URO-D) CH61_RS02765 PF04493 Endonuclease V CH61_RS02770 PF04222 Protein of unknown function (DUF416) CH61_RS02775 PF00216 Bacterial DNA-binding protein CH61_RS02780 PF07356 Protein of unknown function (DUF1481) CH61_RS02785 PF02843 Phosphoribosylglycinamide synthetase, C domain CH61_RS02785 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CH61_RS02785 PF02844 Phosphoribosylglycinamide synthetase, N domain CH61_RS02790 PF01808 AICARFT/IMPCHase bienzyme CH61_RS02790 PF02142 MGS-like domain CH61_RS02840 PF04204 Homoserine O-succinyltransferase CH61_RS02845 PF01274 Malate synthase CH61_RS02850 PF00463 Isocitrate lyase family CH61_RS02855 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CH61_RS02860 PF09339 IclR helix-turn-helix domain CH61_RS02860 PF01614 Bacterial transcriptional regulator CH61_RS02865 PF09339 IclR helix-turn-helix domain CH61_RS02865 PF01614 Bacterial transcriptional regulator CH61_RS02870 PF02310 B12 binding domain CH61_RS02870 PF02607 B12 binding domain CH61_RS02870 PF02965 Vitamin B12 dependent methionine synthase, activation domain CH61_RS02870 PF00809 Pterin binding enzyme CH61_RS02870 PF02574 Homocysteine S-methyltransferase CH61_RS02875 PF05860 haemagglutination activity domain CH61_RS02875 PF13332 Hemagglutinin repeat CH61_RS02880 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH61_RS02880 PF08479 POTRA domain, ShlB-type CH61_RS02880 PF17287 POTRA domain CH61_RS02885 PF00696 Amino acid kinase family CH61_RS02885 PF01842 ACT domain CH61_RS02890 PF00342 Phosphoglucose isomerase CH61_RS02895 PF06146 Phosphate-starvation-inducible E CH61_RS02900 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS02905 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS02905 PF14785 Maltose transport system permease protein MalF P2 domain CH61_RS02910 PF01547 Bacterial extracellular solute-binding protein CH61_RS02920 PF17912 MalK OB fold domain CH61_RS02920 PF00005 ABC transporter CH61_RS02925 PF02264 LamB porin CH61_RS02930 PF07148 Maltose operon periplasmic protein precursor (MalM) CH61_RS02940 PF05638 Type VI secretion system effector, Hcp CH61_RS02950 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH61_RS02960 PF05947 Type VI secretion system, TssF CH61_RS02970 PF00665 Integrase core domain CH61_RS02970 PF02796 Helix-turn-helix domain of resolvase CH61_RS02980 PF01695 IstB-like ATP binding protein CH61_RS02985 PF05947 Type VI secretion system, TssF CH61_RS03005 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH61_RS03015 PF10431 C-terminal, D2-small domain, of ClpB protein CH61_RS03015 PF17871 AAA lid domain CH61_RS03015 PF07724 AAA domain (Cdc48 subfamily) CH61_RS03015 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS03050 PF04717 Type VI secretion system, phage-baseplate injector CH61_RS03065 PF03527 RHS protein CH61_RS03065 PF05593 RHS Repeat CH61_RS03095 PF04717 Type VI secretion system, phage-baseplate injector CH61_RS03105 PF03527 RHS protein CH61_RS03105 PF05593 RHS Repeat CH61_RS03120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH61_RS03120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH61_RS03125 PF12833 Helix-turn-helix domain CH61_RS03125 PF02311 AraC-like ligand binding domain CH61_RS03130 PF05025 RbsD / FucU transport protein family CH61_RS03135 PF00294 pfkB family carbohydrate kinase CH61_RS03140 PF01791 DeoC/LacD family aldolase CH61_RS03145 PF03358 NADPH-dependent FMN reductase CH61_RS03150 PF09084 NMT1/THI5 like CH61_RS03155 PF00296 Luciferase-like monooxygenase CH61_RS03160 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS03165 PF00005 ABC transporter CH61_RS03170 PF04221 RelB antitoxin CH61_RS03175 PF00860 Permease family CH61_RS03180 PF00999 Sodium/hydrogen exchanger family CH61_RS03190 PF03279 Bacterial lipid A biosynthesis acyltransferase CH61_RS03200 PF00005 ABC transporter CH61_RS03205 PF02653 Branched-chain amino acid transport system / permease component CH61_RS03215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS03215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH61_RS03220 PF01380 SIS domain CH61_RS03220 PF00571 CBS domain CH61_RS03225 PF02798 Glutathione S-transferase, N-terminal domain CH61_RS03245 PF01797 Transposase IS200 like CH61_RS03250 PF00313 'Cold-shock' DNA-binding domain CH61_RS03255 PF00313 'Cold-shock' DNA-binding domain CH61_RS03265 PF05433 Glycine zipper 2TM domain CH61_RS03270 PF00753 Metallo-beta-lactamase superfamily CH61_RS03275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH61_RS03275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CH61_RS03280 PF02627 Carboxymuconolactone decarboxylase family CH61_RS03285 PF07690 Major Facilitator Superfamily CH61_RS03305 PF02954 Bacterial regulatory protein, Fis family CH61_RS03310 PF01207 Dihydrouridine synthase (Dus) CH61_RS03320 PF00474 Sodium:solute symporter family CH61_RS03325 PF06196 Protein of unknown function (DUF997) CH61_RS03330 PF00289 Biotin carboxylase, N-terminal domain CH61_RS03330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CH61_RS03330 PF02785 Biotin carboxylase C-terminal domain CH61_RS03335 PF00364 Biotin-requiring enzyme CH61_RS03340 PF01220 Dehydroquinase class II CH61_RS03345 PF01794 Ferric reductase like transmembrane component CH61_RS03350 PF00174 Oxidoreductase molybdopterin binding domain CH61_RS03355 PF00107 Zinc-binding dehydrogenase CH61_RS03355 PF08240 Alcohol dehydrogenase GroES-like domain CH61_RS03360 PF00990 Diguanylate cyclase, GGDEF domain CH61_RS03360 PF00563 EAL domain CH61_RS03360 PF17157 Gammaproteobacterial periplasmic sensor domain CH61_RS03370 PF04085 rod shape-determining protein MreC CH61_RS03375 PF04093 rod shape-determining protein MreD CH61_RS03380 PF02545 Maf-like protein CH61_RS03385 PF00575 S1 RNA binding domain CH61_RS03385 PF10150 Ribonuclease E/G family CH61_RS03390 PF13502 AsmA-like C-terminal region CH61_RS03390 PF13116 Protein of unknown function CH61_RS03395 PF00795 Carbon-nitrogen hydrolase CH61_RS03400 PF01523 Putative modulator of DNA gyrase CH61_RS03405 PF14431 YwqJ-like deaminase CH61_RS03405 PF18807 Tripartite Tc toxins repeat CH61_RS03410 PF05785 Rho-activating domain of cytotoxic necrotizing factor CH61_RS03410 PF18807 Tripartite Tc toxins repeat CH61_RS03435 PF03534 Salmonella virulence plasmid 65kDa B protein CH61_RS03435 PF12255 Insecticide toxin TcdB middle/C-terminal region CH61_RS03435 PF12256 Insecticide toxin TcdB middle/N-terminal region CH61_RS03440 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain CH61_RS03440 PF18413 Neuraminidase-like domain CH61_RS03455 PF03466 LysR substrate binding domain CH61_RS03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS03460 PF03466 LysR substrate binding domain CH61_RS03460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS03465 PF07869 Protein of unknown function (DUF1656) CH61_RS03470 PF13533 Biotin-lipoyl like CH61_RS03475 PF04632 Fusaric acid resistance protein family CH61_RS03480 PF00171 Aldehyde dehydrogenase family CH61_RS03485 PF00171 Aldehyde dehydrogenase family CH61_RS03495 PF01337 Barstar (barnase inhibitor) CH61_RS03500 PF04751 Protein of unknown function (DUF615) CH61_RS03505 PF01523 Putative modulator of DNA gyrase CH61_RS03515 PF07361 Cytochrome b562 CH61_RS03520 PF01272 Transcription elongation factor, GreA/GreB, C-term CH61_RS03520 PF14760 Rnk N-terminus CH61_RS03525 PF00128 Alpha amylase, catalytic domain CH61_RS03525 PF11941 Domain of unknown function (DUF3459) CH61_RS03530 PF02378 Phosphotransferase system, EIIC CH61_RS03530 PF00367 phosphotransferase system, EIIB CH61_RS03535 PF00356 Bacterial regulatory proteins, lacI family CH61_RS03545 PF01695 IstB-like ATP binding protein CH61_RS03565 PF01042 Endoribonuclease L-PSP CH61_RS03570 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CH61_RS03570 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CH61_RS03575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CH61_RS03575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CH61_RS03580 PF00381 PTS HPr component phosphorylation site CH61_RS03585 PF03668 P-loop ATPase protein family CH61_RS03590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH61_RS03600 PF04552 Sigma-54, DNA binding domain CH61_RS03600 PF04963 Sigma-54 factor, core binding domain CH61_RS03600 PF00309 Sigma-54 factor, Activator interacting domain (AID) CH61_RS03605 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH61_RS03605 PF00005 ABC transporter CH61_RS03610 PF03968 OstA-like protein CH61_RS03615 PF06835 Lipopolysaccharide-assembly, LptC-related CH61_RS03625 PF01380 SIS domain CH61_RS03625 PF00571 CBS domain CH61_RS03630 PF01699 Sodium/calcium exchanger protein CH61_RS03635 PF00005 ABC transporter CH61_RS03640 PF02405 Permease MlaE CH61_RS03645 PF02470 MlaD protein CH61_RS03650 PF05494 MlaC protein CH61_RS03655 PF13466 STAS domain CH61_RS03660 PF01722 BolA-like protein CH61_RS03665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH61_RS03670 PF13180 PDZ domain CH61_RS03675 PF01797 Transposase IS200 like CH61_RS03680 PF00595 PDZ domain CH61_RS03680 PF13180 PDZ domain CH61_RS03685 PF06295 Protein of unknown function (DUF1043) CH61_RS03690 PF03969 AFG1-like ATPase CH61_RS03695 PF00572 Ribosomal protein L13 CH61_RS03700 PF00380 Ribosomal protein S9/S16 CH61_RS03710 PF02798 Glutathione S-transferase, N-terminal domain CH61_RS03710 PF00043 Glutathione S-transferase, C-terminal domain CH61_RS03715 PF04386 Stringent starvation protein B CH61_RS03725 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS03725 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CH61_RS03730 PF04898 Glutamate synthase central domain CH61_RS03730 PF00310 Glutamine amidotransferases class-II CH61_RS03730 PF01493 GXGXG motif CH61_RS03730 PF01645 Conserved region in glutamate synthase CH61_RS03735 PF04055 Radical SAM superfamily CH61_RS03735 PF16199 Radical_SAM C-terminal domain CH61_RS03745 PF18415 Histidine kinase receptor ArcB trans-membrane domain CH61_RS03745 PF00989 PAS fold CH61_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS03745 PF00072 Response regulator receiver domain CH61_RS03745 PF01627 Hpt domain CH61_RS03745 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS03760 PF00912 Transglycosylase CH61_RS03765 PF04972 BON domain CH61_RS03770 PF13580 SIS domain CH61_RS03775 PF02021 Uncharacterised protein family UPF0102 CH61_RS03780 PF04348 LppC putative lipoprotein CH61_RS03785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH61_RS03790 PF02678 Pirin CH61_RS03790 PF17954 Quercetinase C-terminal cupin domain CH61_RS03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS03795 PF03466 LysR substrate binding domain CH61_RS03800 PF13409 Glutathione S-transferase, N-terminal domain CH61_RS03805 PF01695 IstB-like ATP binding protein CH61_RS03815 PF02796 Helix-turn-helix domain of resolvase CH61_RS03815 PF00665 Integrase core domain CH61_RS03820 PF00326 Prolyl oligopeptidase family CH61_RS03830 PF01250 Ribosomal protein S6 CH61_RS03835 PF00436 Single-strand binding protein family CH61_RS03840 PF01084 Ribosomal protein S18 CH61_RS03845 PF01281 Ribosomal protein L9, N-terminal domain CH61_RS03845 PF03948 Ribosomal protein L9, C-terminal domain CH61_RS03855 PF01797 Transposase IS200 like CH61_RS03865 PF08525 Opacity-associated protein A N-terminal motif CH61_RS03865 PF04225 Opacity-associated protein A LysM-like domain CH61_RS03870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH61_RS03870 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CH61_RS03875 PF04405 Domain of Unknown function (DUF542) CH61_RS03875 PF01814 Hemerythrin HHE cation binding domain CH61_RS03880 PF00149 Calcineurin-like phosphoesterase CH61_RS03880 PF02872 5'-nucleotidase, C-terminal domain CH61_RS03885 PF00459 Inositol monophosphatase family CH61_RS03890 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CH61_RS03895 PF06526 Protein of unknown function (DUF1107) CH61_RS03900 PF01595 Cyclin M transmembrane N-terminal domain CH61_RS03900 PF03471 Transporter associated domain CH61_RS03900 PF00571 CBS domain CH61_RS03905 PF01625 Peptide methionine sulfoxide reductase CH61_RS03910 PF07244 Surface antigen variable number repeat CH61_RS03910 PF17243 POTRA domain TamA domain 1 CH61_RS03910 PF01103 Surface antigen CH61_RS03915 PF04357 TamB, inner membrane protein subunit of TAM complex CH61_RS03920 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CH61_RS03925 PF00719 Inorganic pyrophosphatase CH61_RS03930 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CH61_RS03935 PF01225 Mur ligase family, catalytic domain CH61_RS03935 PF08245 Mur ligase middle domain CH61_RS03935 PF02875 Mur ligase family, glutamate ligase domain CH61_RS03950 PF01316 Arginine repressor, DNA binding domain CH61_RS03950 PF02863 Arginine repressor, C-terminal domain CH61_RS03955 PF00056 lactate/malate dehydrogenase, NAD binding domain CH61_RS03955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CH61_RS03960 PF13693 Winged helix-turn-helix DNA-binding CH61_RS03970 PF00348 Polyprenyl synthetase CH61_RS03975 PF00829 Ribosomal prokaryotic L21 protein CH61_RS03980 PF01016 Ribosomal L27 protein CH61_RS03985 PF00892 EamA-like transporter family CH61_RS03990 PF01926 50S ribosome-binding GTPase CH61_RS03990 PF01018 GTP1/OBG CH61_RS03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS03995 PF00672 HAMP domain CH61_RS03995 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS04000 PF00072 Response regulator receiver domain CH61_RS04000 PF00486 Transcriptional regulatory protein, C terminal CH61_RS04005 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CH61_RS04010 PF03449 Transcription elongation factor, N-terminal CH61_RS04010 PF01272 Transcription elongation factor, GreA/GreB, C-term CH61_RS04015 PF01985 CRS1 / YhbY (CRM) domain CH61_RS04020 PF01728 FtsJ-like methyltransferase CH61_RS04025 PF06480 FtsH Extracellular CH61_RS04025 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS04025 PF17862 AAA+ lid domain CH61_RS04025 PF01434 Peptidase family M41 CH61_RS04030 PF00809 Pterin binding enzyme CH61_RS04035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH61_RS04035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH61_RS04035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH61_RS04035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH61_RS04040 PF03840 Preprotein translocase SecG subunit CH61_RS04055 PF17384 RimP C-terminal SH3 domain CH61_RS04055 PF02576 RimP N-terminal domain CH61_RS04060 PF13184 NusA-like KH domain CH61_RS04060 PF08529 NusA N-terminal domain CH61_RS04060 PF00575 S1 RNA binding domain CH61_RS04065 PF03144 Elongation factor Tu domain 2 CH61_RS04065 PF08364 Bacterial translation initiation factor IF-2 associated region CH61_RS04065 PF04760 Translation initiation factor IF-2, N-terminal region CH61_RS04065 PF11987 Translation-initiation factor 2 CH61_RS04065 PF00009 Elongation factor Tu GTP binding domain CH61_RS04070 PF02033 Ribosome-binding factor A CH61_RS04075 PF01509 TruB family pseudouridylate synthase (N terminal domain) CH61_RS04075 PF16198 tRNA pseudouridylate synthase B C-terminal domain CH61_RS04075 PF09157 Pseudouridine synthase II TruB, C-terminal CH61_RS04080 PF00312 Ribosomal protein S15 CH61_RS04090 PF13333 Integrase core domain CH61_RS04090 PF00665 Integrase core domain CH61_RS04090 PF13276 HTH-like domain CH61_RS04095 PF00575 S1 RNA binding domain CH61_RS04095 PF03725 3' exoribonuclease family, domain 2 CH61_RS04095 PF01138 3' exoribonuclease family, domain 1 CH61_RS04095 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CH61_RS04095 PF00013 KH domain CH61_RS04100 PF07719 Tetratricopeptide repeat CH61_RS04100 PF13181 Tetratricopeptide repeat CH61_RS04105 PF00271 Helicase conserved C-terminal domain CH61_RS04105 PF12343 Cold shock protein DEAD box A CH61_RS04105 PF00270 DEAD/DEAH box helicase CH61_RS04105 PF03880 DbpA RNA binding domain CH61_RS04120 PF01381 Helix-turn-helix CH61_RS04125 PF00296 Luciferase-like monooxygenase CH61_RS04130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH61_RS04130 PF00529 HlyD membrane-fusion protein of T1SS CH61_RS04135 PF00873 AcrB/AcrD/AcrF family CH61_RS04140 PF02321 Outer membrane efflux protein CH61_RS04140 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH61_RS04145 PF01136 Peptidase family U32 CH61_RS04150 PF01136 Peptidase family U32 CH61_RS04160 PF02036 SCP-2 sterol transfer family CH61_RS04165 PF13508 Acetyltransferase (GNAT) domain CH61_RS04170 PF01541 GIY-YIG catalytic domain CH61_RS04185 PF13416 Bacterial extracellular solute-binding protein CH61_RS04190 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS04195 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS04200 PF00005 ABC transporter CH61_RS04200 PF03459 TOBE domain CH61_RS04200 PF17912 MalK OB fold domain CH61_RS04215 PF13460 NAD(P)H-binding CH61_RS04220 PF12706 Beta-lactamase superfamily domain CH61_RS04230 PF07969 Amidohydrolase family CH61_RS04235 PF00005 ABC transporter CH61_RS04240 PF00005 ABC transporter CH61_RS04245 PF06007 Phosphonate metabolism protein PhnJ CH61_RS04250 PF05861 Bacterial phosphonate metabolism protein (PhnI) CH61_RS04255 PF05845 Bacterial phosphonate metabolism protein (PhnH) CH61_RS04260 PF06754 Phosphonate metabolism protein PhnG CH61_RS04265 PF00392 Bacterial regulatory proteins, gntR family CH61_RS04265 PF07702 UTRA domain CH61_RS04275 PF03477 ATP cone domain CH61_RS04275 PF13597 Anaerobic ribonucleoside-triphosphate reductase CH61_RS04280 PF00005 ABC transporter CH61_RS04280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH61_RS04285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH61_RS04285 PF00005 ABC transporter CH61_RS04290 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS04290 PF12911 N-terminal TM domain of oligopeptide transport permease C CH61_RS04295 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS04305 PF04074 YhcH/YjgK/YiaL CH61_RS04310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CH61_RS04310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CH61_RS04315 PF06877 Regulator of ribonuclease activity B CH61_RS04320 PF00583 Acetyltransferase (GNAT) family CH61_RS04325 PF00133 tRNA synthetases class I (I, L, M and V) CH61_RS04325 PF08264 Anticodon-binding domain of tRNA CH61_RS04325 PF10458 Valyl tRNA synthetase tRNA binding arm CH61_RS04330 PF04364 DNA polymerase III chi subunit, HolC CH61_RS04335 PF02789 Cytosol aminopeptidase family, N-terminal domain CH61_RS04335 PF00883 Cytosol aminopeptidase family, catalytic domain CH61_RS04340 PF03739 Lipopolysaccharide export system permease LptF/LptG CH61_RS04345 PF03739 Lipopolysaccharide export system permease LptF/LptG CH61_RS04355 PF13356 Arm DNA-binding domain CH61_RS04355 PF00589 Phage integrase family CH61_RS04365 PF01119 DNA mismatch repair protein, C-terminal domain CH61_RS04365 PF08676 MutL C terminal dimerisation domain CH61_RS04370 PF01695 IstB-like ATP binding protein CH61_RS04380 PF00665 Integrase core domain CH61_RS04380 PF02796 Helix-turn-helix domain of resolvase CH61_RS04385 PF01797 Transposase IS200 like CH61_RS04390 PF03884 DNA gyrase inhibitor YacG CH61_RS04395 PF07072 Cell division protein CH61_RS04400 PF01121 Dephospho-CoA kinase CH61_RS04410 PF00478 IMP dehydrogenase / GMP reductase domain CH61_RS04415 PF00482 Type II secretion system (T2SS), protein F CH61_RS04420 PF00437 Type II/IV secretion system protein CH61_RS04420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CH61_RS04425 PF07963 Prokaryotic N-terminal methylation motif CH61_RS04430 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CH61_RS04430 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CH61_RS04435 PF01510 N-acetylmuramoyl-L-alanine amidase CH61_RS04440 PF17113 Regulatory signalling modulator protein AmpE CH61_RS04445 PF00324 Amino acid permease CH61_RS04450 PF00392 Bacterial regulatory proteins, gntR family CH61_RS04450 PF07729 FCD domain CH61_RS04455 PF17831 Pyruvate dehydrogenase E1 component middle domain CH61_RS04455 PF00456 Transketolase, thiamine diphosphate binding domain CH61_RS04460 PF00364 Biotin-requiring enzyme CH61_RS04460 PF02817 e3 binding domain CH61_RS04460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH61_RS04465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS04465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH61_RS04475 PF01797 Transposase IS200 like CH61_RS04480 PF11791 Aconitate B N-terminal domain CH61_RS04480 PF00330 Aconitase family (aconitate hydratase) CH61_RS04480 PF06434 Aconitate hydratase 2 N-terminus CH61_RS04485 PF06062 Uncharacterised protein family (UPF0231) CH61_RS04490 PF00892 EamA-like transporter family CH61_RS04495 PF02675 S-adenosylmethionine decarboxylase CH61_RS04500 PF17284 Spermidine synthase tetramerisation domain CH61_RS04505 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CH61_RS04510 PF07731 Multicopper oxidase CH61_RS04510 PF10518 TAT (twin-arginine translocation) pathway signal sequence CH61_RS04510 PF00394 Multicopper oxidase CH61_RS04510 PF07732 Multicopper oxidase CH61_RS04515 PF00156 Phosphoribosyl transferase domain CH61_RS04520 PF00484 Carbonic anhydrase CH61_RS04525 PF00005 ABC transporter CH61_RS04530 PF01061 ABC-2 type transporter CH61_RS04535 PF01522 Polysaccharide deacetylase CH61_RS04540 PF02261 Aspartate decarboxylase CH61_RS04545 PF02569 Pantoate-beta-alanine ligase CH61_RS04550 PF02548 Ketopantoate hydroxymethyltransferase CH61_RS04555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CH61_RS04560 PF01743 Poly A polymerase head domain CH61_RS04560 PF12627 Probable RNA and SrmB- binding site of polymerase A CH61_RS04560 PF12626 Polymerase A arginine-rich C-terminus CH61_RS04565 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH61_RS04570 PF01258 Prokaryotic dksA/traR C4-type zinc finger CH61_RS04575 PF03749 Sugar fermentation stimulation protein RE domain CH61_RS04575 PF17746 SfsA N-terminal OB domain CH61_RS04580 PF02834 LigT like Phosphoesterase CH61_RS04585 PF00270 DEAD/DEAH box helicase CH61_RS04585 PF08482 ATP-dependent helicase C-terminal CH61_RS04585 PF00271 Helicase conserved C-terminal domain CH61_RS04585 PF04408 Helicase associated domain (HA2) CH61_RS04590 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CH61_RS04590 PF00912 Transglycosylase CH61_RS04590 PF14814 Bifunctional transglycosylase second domain CH61_RS04590 PF00905 Penicillin binding protein transpeptidase domain CH61_RS04595 PF00005 ABC transporter CH61_RS04600 PF01497 Periplasmic binding protein CH61_RS04605 PF01032 FecCD transport family CH61_RS04610 PF00202 Aminotransferase class-III CH61_RS04615 PF00654 Voltage gated chloride channel CH61_RS04620 PF01521 Iron-sulphur cluster biosynthesis CH61_RS04625 PF03458 UPF0126 domain CH61_RS04630 PF01497 Periplasmic binding protein CH61_RS04635 PF01048 Phosphorylase superfamily CH61_RS04640 PF13286 Phosphohydrolase-associated domain CH61_RS04640 PF01966 HD domain CH61_RS04645 PF00595 PDZ domain CH61_RS04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS04650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CH61_RS04650 PF00072 Response regulator receiver domain CH61_RS04650 PF01627 Hpt domain CH61_RS04650 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS04650 PF00672 HAMP domain CH61_RS04655 PF13291 ACT domain CH61_RS04655 PF04607 Region found in RelA / SpoT proteins CH61_RS04655 PF02824 TGS domain CH61_RS04665 PF03819 MazG nucleotide pyrophosphohydrolase domain CH61_RS04670 PF00117 Glutamine amidotransferase class-I CH61_RS04670 PF06418 CTP synthase N-terminus CH61_RS04675 PF03952 Enolase, N-terminal domain CH61_RS04675 PF00113 Enolase, C-terminal TIM barrel domain CH61_RS04680 PF00080 Copper/zinc superoxide dismutase (SODC) CH61_RS04685 PF04055 Radical SAM superfamily CH61_RS04690 PF01242 6-pyruvoyl tetrahydropterin synthase CH61_RS04695 PF00175 Oxidoreductase NAD-binding domain CH61_RS04695 PF00258 Flavodoxin CH61_RS04695 PF00667 FAD binding domain CH61_RS04700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CH61_RS04700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CH61_RS04725 PF10414 Sirohaem synthase dimerisation region CH61_RS04725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH61_RS04725 PF14824 Sirohaem biosynthesis protein central CH61_RS04730 PF01507 Phosphoadenosine phosphosulfate reductase family CH61_RS04735 PF00009 Elongation factor Tu GTP binding domain CH61_RS04745 PF12084 Protein of unknown function (DUF3561) CH61_RS04750 PF04977 Septum formation initiator CH61_RS04755 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CH61_RS04760 PF02542 YgbB family CH61_RS04765 PF01142 tRNA pseudouridine synthase D (TruD) CH61_RS04770 PF01975 Survival protein SurE CH61_RS04780 PF01476 LysM domain CH61_RS04780 PF01551 Peptidase family M23 CH61_RS04785 PF04542 Sigma-70 region 2 CH61_RS04785 PF00140 Sigma-70 factor, region 1.2 CH61_RS04785 PF04539 Sigma-70 region 3 CH61_RS04785 PF04545 Sigma-70, region 4 CH61_RS04790 PF05188 MutS domain II CH61_RS04790 PF01624 MutS domain I CH61_RS04790 PF00488 MutS domain V CH61_RS04790 PF05190 MutS family domain IV CH61_RS04790 PF05192 MutS domain III CH61_RS04800 PF02502 Ribose/Galactose Isomerase CH61_RS04805 PF08240 Alcohol dehydrogenase GroES-like domain CH61_RS04805 PF00107 Zinc-binding dehydrogenase CH61_RS04815 PF02733 Dak1 domain CH61_RS04820 PF02734 DAK2 domain CH61_RS04825 PF13936 Helix-turn-helix domain CH61_RS04825 PF04198 Putative sugar-binding domain CH61_RS04830 PF02040 Arsenical pump membrane protein CH61_RS04835 PF01022 Bacterial regulatory protein, arsR family CH61_RS04850 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS04855 PF00034 Cytochrome c CH61_RS04855 PF03150 Di-haem cytochrome c peroxidase CH61_RS04855 PF14376 Haem-binding domain CH61_RS04865 PF07715 TonB-dependent Receptor Plug Domain CH61_RS04865 PF00593 TonB dependent receptor CH61_RS04885 PF00557 Metallopeptidase family M24 CH61_RS04895 PF05683 Fumarase C-terminus CH61_RS04895 PF05681 Fumarate hydratase (Fumerase) CH61_RS04900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS04900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH61_RS04905 PF01261 Xylose isomerase-like TIM barrel CH61_RS04910 PF02653 Branched-chain amino acid transport system / permease component CH61_RS04915 PF02653 Branched-chain amino acid transport system / permease component CH61_RS04920 PF00005 ABC transporter CH61_RS04925 PF01797 Transposase IS200 like CH61_RS04935 PF00455 DeoR C terminal sensor domain CH61_RS04935 PF08220 DeoR-like helix-turn-helix domain CH61_RS04940 PF00596 Class II Aldolase and Adducin N-terminal domain CH61_RS04945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH61_RS04945 PF00384 Molybdopterin oxidoreductase CH61_RS04945 PF01568 Molydopterin dinucleotide binding domain CH61_RS04950 PF12800 4Fe-4S binding domain CH61_RS04950 PF13247 4Fe-4S dicluster domain CH61_RS04955 PF04976 DMSO reductase anchor subunit (DmsC) CH61_RS04960 PF02613 Nitrate reductase delta subunit CH61_RS04965 PF01292 Prokaryotic cytochrome b561 CH61_RS04970 PF07361 Cytochrome b562 CH61_RS04975 PF00141 Peroxidase CH61_RS04980 PF13407 Periplasmic binding protein domain CH61_RS04990 PF00005 ABC transporter CH61_RS04995 PF02653 Branched-chain amino acid transport system / permease component CH61_RS05000 PF00456 Transketolase, thiamine diphosphate binding domain CH61_RS05005 PF02780 Transketolase, C-terminal domain CH61_RS05005 PF02779 Transketolase, pyrimidine binding domain CH61_RS05010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH61_RS05010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS05025 PF07690 Major Facilitator Superfamily CH61_RS05030 PF02464 Competence-damaged protein CH61_RS05035 PF00154 recA bacterial DNA recombination protein CH61_RS05040 PF02631 RecX family CH61_RS05045 PF01411 tRNA synthetases class II (A) CH61_RS05045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH61_RS05045 PF02272 DHHA1 domain CH61_RS05050 PF02599 Global regulator protein family CH61_RS05075 PF13419 Haloacid dehalogenase-like hydrolase CH61_RS05080 PF09335 SNARE associated Golgi protein CH61_RS05085 PF04262 Glutamate-cysteine ligase CH61_RS05090 PF02664 S-Ribosylhomocysteinase (LuxS) CH61_RS05100 PF01797 Transposase IS200 like CH61_RS05110 PF01797 Transposase IS200 like CH61_RS05115 PF03471 Transporter associated domain CH61_RS05115 PF01595 Cyclin M transmembrane N-terminal domain CH61_RS05115 PF00571 CBS domain CH61_RS05120 PF01578 Cytochrome C assembly protein CH61_RS05125 PF02978 Signal peptide binding domain CH61_RS05125 PF02881 SRP54-type protein, helical bundle domain CH61_RS05125 PF00448 SRP54-type protein, GTPase domain CH61_RS05130 PF00886 Ribosomal protein S16 CH61_RS05135 PF01782 RimM N-terminal domain CH61_RS05135 PF05239 PRC-barrel domain CH61_RS05140 PF01746 tRNA (Guanine-1)-methyltransferase CH61_RS05145 PF01245 Ribosomal protein L19 CH61_RS05155 PF04338 Protein of unknown function, DUF481 CH61_RS05160 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH61_RS05165 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH61_RS05170 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH61_RS05175 PF04397 LytTr DNA-binding domain CH61_RS05175 PF00072 Response regulator receiver domain CH61_RS05180 PF00793 DAHP synthetase I family CH61_RS05185 PF01817 Chorismate mutase type II CH61_RS05185 PF02153 Prephenate dehydrogenase CH61_RS05190 PF00800 Prephenate dehydratase CH61_RS05190 PF01817 Chorismate mutase type II CH61_RS05195 PF01695 IstB-like ATP binding protein CH61_RS05205 PF00665 Integrase core domain CH61_RS05205 PF02796 Helix-turn-helix domain of resolvase CH61_RS05210 PF00800 Prephenate dehydratase CH61_RS05210 PF01817 Chorismate mutase type II CH61_RS05220 PF01797 Transposase IS200 like CH61_RS05225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CH61_RS05230 PF13525 Outer membrane lipoprotein CH61_RS05235 PF01479 S4 domain CH61_RS05235 PF00849 RNA pseudouridylate synthase CH61_RS05240 PF02578 Multi-copper polyphenol oxidoreductase laccase CH61_RS05245 PF10431 C-terminal, D2-small domain, of ClpB protein CH61_RS05245 PF17871 AAA lid domain CH61_RS05245 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS05245 PF07724 AAA domain (Cdc48 subfamily) CH61_RS05245 PF02861 Clp amino terminal domain, pathogenicity island component CH61_RS05285 PF10043 Predicted periplasmic lipoprotein (DUF2279) CH61_RS05290 PF13091 PLD-like domain CH61_RS05295 PF13607 Succinyl-CoA ligase like flavodoxin domain CH61_RS05295 PF00583 Acetyltransferase (GNAT) family CH61_RS05295 PF13380 CoA binding domain CH61_RS05300 PF03942 DTW domain CH61_RS05305 PF00085 Thioredoxin CH61_RS05310 PF00588 SpoU rRNA Methylase family CH61_RS05310 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH61_RS05315 PF07690 Major Facilitator Superfamily CH61_RS05320 PF00529 HlyD membrane-fusion protein of T1SS CH61_RS05320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH61_RS05325 PF01047 MarR family CH61_RS05330 PF05437 Branched-chain amino acid transport protein (AzlD) CH61_RS05335 PF03591 AzlC protein CH61_RS05340 PF07690 Major Facilitator Superfamily CH61_RS05350 PF01425 Amidase CH61_RS05370 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS05375 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS05380 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS05385 PF00005 ABC transporter CH61_RS05390 PF00266 Aminotransferase class-V CH61_RS05395 PF01695 IstB-like ATP binding protein CH61_RS05400 PF02796 Helix-turn-helix domain of resolvase CH61_RS05400 PF00665 Integrase core domain CH61_RS05410 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH61_RS05415 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS05420 PF00005 ABC transporter CH61_RS05420 PF00571 CBS domain CH61_RS05425 PF00268 Ribonucleotide reductase, small chain CH61_RS05430 PF00317 Ribonucleotide reductase, all-alpha domain CH61_RS05430 PF08343 Ribonucleotide reductase N-terminal CH61_RS05430 PF02867 Ribonucleotide reductase, barrel domain CH61_RS05435 PF07972 NrdI Flavodoxin like CH61_RS05445 PF06392 Acid shock protein repeat CH61_RS05450 PF09400 Protein of unknown function (DUF2002) CH61_RS05455 PF06711 Protein of unknown function (DUF1198) CH61_RS05460 PF00872 Transposase, Mutator family CH61_RS05470 PF00313 'Cold-shock' DNA-binding domain CH61_RS05475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH61_RS05480 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS05485 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS05485 PF12911 N-terminal TM domain of oligopeptide transport permease C CH61_RS05490 PF00005 ABC transporter CH61_RS05495 PF00005 ABC transporter CH61_RS05500 PF00547 Urease, gamma subunit CH61_RS05505 PF00699 Urease beta subunit CH61_RS05510 PF00449 Urease alpha-subunit, N-terminal domain CH61_RS05510 PF01979 Amidohydrolase family CH61_RS05515 PF02814 UreE urease accessory protein, N-terminal domain CH61_RS05515 PF05194 UreE urease accessory protein, C-terminal domain CH61_RS05520 PF01730 UreF CH61_RS05525 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH61_RS05530 PF01774 UreD urease accessory protein CH61_RS05535 PF03253 Urea transporter CH61_RS05540 PF03824 High-affinity nickel-transport protein CH61_RS05545 PF06411 HdeA/HdeB family CH61_RS05555 PF02254 TrkA-N domain CH61_RS05555 PF07885 Ion channel CH61_RS05560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH61_RS05565 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH61_RS05575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH61_RS05580 PF02378 Phosphotransferase system, EIIC CH61_RS05585 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CH61_RS05590 PF07883 Cupin domain CH61_RS05590 PF12833 Helix-turn-helix domain CH61_RS05595 PF04794 YdjC-like protein CH61_RS05610 PF17206 SeqA protein N-terminal domain CH61_RS05610 PF03925 SeqA protein C-terminal domain CH61_RS05615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH61_RS05615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH61_RS05615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH61_RS05615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH61_RS05635 PF00072 Response regulator receiver domain CH61_RS05635 PF00486 Transcriptional regulatory protein, C terminal CH61_RS05640 PF13493 Domain of unknown function (DUF4118) CH61_RS05640 PF02702 Osmosensitive K+ channel His kinase sensor domain CH61_RS05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS05640 PF13492 GAF domain CH61_RS05640 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS05645 PF02669 K+-transporting ATPase, c chain CH61_RS05655 PF03814 Potassium-transporting ATPase A subunit CH61_RS05670 PF10725 Protein of unknown function (DUF2517) CH61_RS05675 PF08349 Protein of unknown function (DUF1722) CH61_RS05680 PF03441 FAD binding domain of DNA photolyase CH61_RS05680 PF00875 DNA photolyase CH61_RS05685 PF02112 cAMP phosphodiesterases class-II CH61_RS05690 PF01784 NIF3 (NGG1p interacting factor 3) CH61_RS05700 PF02626 Carboxyltransferase domain, subdomain A and B CH61_RS05705 PF03746 LamB/YcsF family CH61_RS05720 PF01470 Pyroglutamyl peptidase CH61_RS05725 PF03167 Uracil DNA glycosylase superfamily CH61_RS05730 PF01228 Glycine radical CH61_RS05745 PF12796 Ankyrin repeats (3 copies) CH61_RS05750 PF00270 DEAD/DEAH box helicase CH61_RS05750 PF00271 Helicase conserved C-terminal domain CH61_RS05755 PF05175 Methyltransferase small domain CH61_RS05760 PF02910 Fumarate reductase flavoprotein C-term CH61_RS05760 PF00890 FAD binding domain CH61_RS05765 PF08281 Sigma-70, region 4 CH61_RS05765 PF04542 Sigma-70 region 2 CH61_RS05770 PF03872 Anti sigma-E protein RseA, N-terminal domain CH61_RS05770 PF03873 Anti sigma-E protein RseA, C-terminal domain CH61_RS05775 PF03888 MucB/RseB N-terminal domain CH61_RS05775 PF17188 MucB/RseB C-terminal domain CH61_RS05790 PF00679 Elongation factor G C-terminus CH61_RS05790 PF06421 GTP-binding protein LepA C-terminus CH61_RS05790 PF00009 Elongation factor Tu GTP binding domain CH61_RS05790 PF03144 Elongation factor Tu domain 2 CH61_RS05795 PF10502 Signal peptidase, peptidase S26 CH61_RS05800 PF14622 Ribonuclease-III-like CH61_RS05800 PF00035 Double-stranded RNA binding motif CH61_RS05805 PF07650 KH domain CH61_RS05805 PF01926 50S ribosome-binding GTPase CH61_RS05810 PF11967 Recombination protein O N terminal CH61_RS05810 PF02565 Recombination protein O C terminal CH61_RS05815 PF00665 Integrase core domain CH61_RS05815 PF02796 Helix-turn-helix domain of resolvase CH61_RS05825 PF01695 IstB-like ATP binding protein CH61_RS05835 PF14331 ImcF-related N-terminal domain CH61_RS05835 PF06744 Type VI secretion protein IcmF C-terminal CH61_RS05835 PF06761 Intracellular multiplication and human macrophage-killing CH61_RS05840 PF04717 Type VI secretion system, phage-baseplate injector CH61_RS05855 PF07024 ImpE protein CH61_RS05870 PF03831 PhnA domain CH61_RS05870 PF08274 PhnA Zinc-Ribbon CH61_RS05880 PF04011 LemA family CH61_RS05895 PF00005 ABC transporter CH61_RS05900 PF03379 CcmB protein CH61_RS05905 PF01578 Cytochrome C assembly protein CH61_RS05910 PF04995 Heme exporter protein D (CcmD) CH61_RS05915 PF03100 CcmE CH61_RS05920 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CH61_RS05920 PF01578 Cytochrome C assembly protein CH61_RS05925 PF08534 Redoxin CH61_RS05930 PF03918 Cytochrome C biogenesis protein CH61_RS05935 PF03918 Cytochrome C biogenesis protein CH61_RS05940 PF04333 MlaA lipoprotein CH61_RS05945 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CH61_RS05950 PF04175 Protein of unknown function (DUF406) CH61_RS05955 PF00108 Thiolase, N-terminal domain CH61_RS05955 PF02803 Thiolase, C-terminal domain CH61_RS05960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CH61_RS05960 PF00378 Enoyl-CoA hydratase/isomerase CH61_RS05960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CH61_RS05965 PF00300 Histidine phosphatase superfamily (branch 1) CH61_RS05970 PF01713 Smr domain CH61_RS05975 PF05175 Methyltransferase small domain CH61_RS05980 PF01264 Chorismate synthase CH61_RS05985 PF03411 Penicillin-insensitive murein endopeptidase CH61_RS05990 PF01925 Sulfite exporter TauE/SafE CH61_RS05995 PF04315 Elongation factor P hydroxylase CH61_RS06000 PF08891 YfcL protein CH61_RS06005 PF01266 FAD dependent oxidoreductase CH61_RS06005 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CH61_RS06010 PF00109 Beta-ketoacyl synthase, N-terminal domain CH61_RS06010 PF02801 Beta-ketoacyl synthase, C-terminal domain CH61_RS06015 PF01177 Asp/Glu/Hydantoin racemase CH61_RS06020 PF00419 Fimbrial protein CH61_RS06030 PF00892 EamA-like transporter family CH61_RS06045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH61_RS06045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH61_RS06045 PF11890 Domain of unknown function (DUF3410) CH61_RS06050 PF01797 Transposase IS200 like CH61_RS06055 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH61_RS06055 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH61_RS06060 PF01416 tRNA pseudouridine synthase CH61_RS06065 PF09335 SNARE associated Golgi protein CH61_RS06070 PF17848 Acetyl-coA carboxylase zinc finger domain CH61_RS06070 PF01039 Carboxyl transferase domain CH61_RS06075 PF02875 Mur ligase family, glutamate ligase domain CH61_RS06075 PF08245 Mur ligase middle domain CH61_RS06080 PF05036 Sporulation related domain CH61_RS06085 PF02674 Colicin V production protein CH61_RS06090 PF00156 Phosphoribosyl transferase domain CH61_RS06095 PF02441 Flavoprotein CH61_RS06100 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS06105 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS06110 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS06115 PF00005 ABC transporter CH61_RS06120 PF01370 NAD dependent epimerase/dehydratase family CH61_RS06120 PF08338 Domain of unknown function (DUF1731) CH61_RS06130 PF12850 Calcineurin-like phosphoesterase superfamily domain CH61_RS06135 PF00293 NUDIX domain CH61_RS06140 PF03611 PTS system sugar-specific permease component CH61_RS06145 PF00872 Transposase, Mutator family CH61_RS06150 PF06832 Penicillin-Binding Protein C-terminus Family CH61_RS06150 PF00912 Transglycosylase CH61_RS06150 PF00905 Penicillin binding protein transpeptidase domain CH61_RS06155 PF13693 Winged helix-turn-helix DNA-binding CH61_RS06180 PF05638 Type VI secretion system effector, Hcp CH61_RS06195 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH61_RS06195 PF03797 Autotransporter beta-domain CH61_RS06195 PF03212 Pertactin CH61_RS06195 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS06205 PF08007 Cupin superfamily protein CH61_RS06210 PF00872 Transposase, Mutator family CH61_RS06225 PF14310 Fibronectin type III-like domain CH61_RS06225 PF01915 Glycosyl hydrolase family 3 C-terminal domain CH61_RS06225 PF00933 Glycosyl hydrolase family 3 N terminal domain CH61_RS06245 PF00248 Aldo/keto reductase family CH61_RS06250 PF00248 Aldo/keto reductase family CH61_RS06255 PF03466 LysR substrate binding domain CH61_RS06255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS06260 PF02796 Helix-turn-helix domain of resolvase CH61_RS06260 PF00665 Integrase core domain CH61_RS06270 PF01695 IstB-like ATP binding protein CH61_RS06285 PF00782 Dual specificity phosphatase, catalytic domain CH61_RS06290 PF12146 Serine aminopeptidase, S33 CH61_RS06290 PF12147 Putative methyltransferase CH61_RS06295 PF01553 Acyltransferase CH61_RS06305 PF01066 CDP-alcohol phosphatidyltransferase CH61_RS06350 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CH61_RS06350 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CH61_RS06370 PF00586 AIR synthase related protein, N-terminal domain CH61_RS06370 PF02769 AIR synthase related protein, C-terminal domain CH61_RS06375 PF00551 Formyl transferase CH61_RS06380 PF13302 Acetyltransferase (GNAT) domain CH61_RS06395 PF00005 ABC transporter CH61_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS06405 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS06410 PF13089 Polyphosphate kinase N-terminal domain CH61_RS06410 PF17941 Polyphosphate kinase C-terminal domain 1 CH61_RS06410 PF13090 Polyphosphate kinase C-terminal domain 2 CH61_RS06410 PF02503 Polyphosphate kinase middle domain CH61_RS06415 PF02541 Ppx/GppA phosphatase family CH61_RS06425 PF03448 MgtE intracellular N domain CH61_RS06425 PF00571 CBS domain CH61_RS06425 PF01769 Divalent cation transporter CH61_RS06430 PF00012 Hsp70 protein CH61_RS06435 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS06440 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS06450 PF00202 Aminotransferase class-III CH61_RS06455 PF00155 Aminotransferase class I and II CH61_RS06455 PF00392 Bacterial regulatory proteins, gntR family CH61_RS06460 PF08402 TOBE domain CH61_RS06460 PF00005 ABC transporter CH61_RS06465 PF13533 Biotin-lipoyl like CH61_RS06470 PF00873 AcrB/AcrD/AcrF family CH61_RS06475 PF00873 AcrB/AcrD/AcrF family CH61_RS06480 PF07690 Major Facilitator Superfamily CH61_RS06485 PF00672 HAMP domain CH61_RS06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS06485 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS06490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS06490 PF00672 HAMP domain CH61_RS06490 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS06495 PF00486 Transcriptional regulatory protein, C terminal CH61_RS06495 PF00072 Response regulator receiver domain CH61_RS06500 PF07411 Domain of unknown function (DUF1508) CH61_RS06505 PF01136 Peptidase family U32 CH61_RS06505 PF16325 Peptidase family U32 C-terminal domain CH61_RS06510 PF00781 Diacylglycerol kinase catalytic domain CH61_RS06525 PF08543 Phosphomethylpyrimidine kinase CH61_RS06540 PF00872 Transposase, Mutator family CH61_RS06570 PF05638 Type VI secretion system effector, Hcp CH61_RS06575 PF01797 Transposase IS200 like CH61_RS06580 PF02540 NAD synthase CH61_RS06580 PF00958 GMP synthase C terminal domain CH61_RS06580 PF00117 Glutamine amidotransferase class-I CH61_RS06590 PF00478 IMP dehydrogenase / GMP reductase domain CH61_RS06590 PF00571 CBS domain CH61_RS06595 PF13742 OB-fold nucleic acid binding domain CH61_RS06595 PF02601 Exonuclease VII, large subunit CH61_RS06600 PF07191 zinc-ribbons CH61_RS06610 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CH61_RS06610 PF01926 50S ribosome-binding GTPase CH61_RS06615 PF13360 PQQ-like domain CH61_RS06620 PF09976 Tetratricopeptide repeat-like domain CH61_RS06625 PF03129 Anticodon binding domain CH61_RS06625 PF13393 Histidyl-tRNA synthetase CH61_RS06630 PF04551 GcpE protein CH61_RS06635 PF13464 Domain of unknown function (DUF4115) CH61_RS06645 PF04055 Radical SAM superfamily CH61_RS06650 PF00334 Nucleoside diphosphate kinase CH61_RS06665 PF03212 Pertactin CH61_RS06665 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH61_RS06665 PF03797 Autotransporter beta-domain CH61_RS06670 PF03212 Pertactin CH61_RS06670 PF03797 Autotransporter beta-domain CH61_RS06670 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH61_RS06680 PF07179 SseB protein N-terminal domain CH61_RS06680 PF14581 SseB protein C-terminal domain CH61_RS06685 PF00883 Cytosol aminopeptidase family, catalytic domain CH61_RS06685 PF12404 Peptidase CH61_RS06690 PF04384 Iron-sulphur cluster assembly CH61_RS06695 PF00111 2Fe-2S iron-sulfur cluster binding domain CH61_RS06700 PF00012 Hsp70 protein CH61_RS06705 PF07743 HSCB C-terminal oligomerisation domain CH61_RS06705 PF00226 DnaJ domain CH61_RS06710 PF01521 Iron-sulphur cluster biosynthesis CH61_RS06715 PF01592 NifU-like N terminal domain CH61_RS06720 PF00266 Aminotransferase class-V CH61_RS06725 PF02082 Transcriptional regulator CH61_RS06730 PF00588 SpoU rRNA Methylase family CH61_RS06735 PF00459 Inositol monophosphatase family CH61_RS06740 PF01797 Transposase IS200 like CH61_RS06745 PF03824 High-affinity nickel-transport protein CH61_RS06750 PF06226 Protein of unknown function (DUF1007) CH61_RS06755 PF00874 PRD domain CH61_RS06760 PF12832 MFS_1 like family CH61_RS06765 PF13505 Outer membrane protein beta-barrel domain CH61_RS06775 PF00464 Serine hydroxymethyltransferase CH61_RS06780 PF00175 Oxidoreductase NAD-binding domain CH61_RS06780 PF00042 Globin CH61_RS06780 PF00970 Oxidoreductase FAD-binding domain CH61_RS06785 PF14502 Helix-turn-helix domain CH61_RS06785 PF14503 YhfZ C-terminal domain CH61_RS06790 PF14502 Helix-turn-helix domain CH61_RS06790 PF14503 YhfZ C-terminal domain CH61_RS06795 PF00543 Nitrogen regulatory protein P-II CH61_RS06800 PF00795 Carbon-nitrogen hydrolase CH61_RS06800 PF02540 NAD synthase CH61_RS06805 PF00072 Response regulator receiver domain CH61_RS06805 PF00158 Sigma-54 interaction domain CH61_RS06810 PF13942 YfhG lipoprotein CH61_RS06815 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS06840 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CH61_RS06840 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CH61_RS06840 PF02769 AIR synthase related protein, C-terminal domain CH61_RS06845 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS06845 PF01464 Transglycosylase SLT domain CH61_RS06850 PF14437 MafB19-like deaminase CH61_RS06860 PF01380 SIS domain CH61_RS06865 PF01380 SIS domain CH61_RS06865 PF01418 Helix-turn-helix domain, rpiR family CH61_RS06870 PF12838 4Fe-4S dicluster domain CH61_RS06875 PF01797 Transposase IS200 like CH61_RS06885 PF01648 4'-phosphopantetheinyl transferase superfamily CH61_RS06890 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CH61_RS06895 PF01695 IstB-like ATP binding protein CH61_RS06900 PF00665 Integrase core domain CH61_RS06900 PF02796 Helix-turn-helix domain of resolvase CH61_RS06910 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH61_RS06925 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH61_RS06930 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH61_RS06940 PF13954 PapC N-terminal domain CH61_RS06940 PF13953 PapC C-terminal domain CH61_RS06940 PF00577 Outer membrane usher protein CH61_RS06945 PF00872 Transposase, Mutator family CH61_RS06950 PF13953 PapC C-terminal domain CH61_RS06950 PF00577 Outer membrane usher protein CH61_RS06950 PF13954 PapC N-terminal domain CH61_RS06955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS06955 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS06960 PF16970 Type-1 fimbrial protein, A CH61_RS06965 PF10431 C-terminal, D2-small domain, of ClpB protein CH61_RS06965 PF07724 AAA domain (Cdc48 subfamily) CH61_RS06965 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS06965 PF17871 AAA lid domain CH61_RS06970 PF05947 Type VI secretion system, TssF CH61_RS07015 PF13406 Transglycosylase SLT domain CH61_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS07030 PF00005 ABC transporter CH61_RS07040 PF05638 Type VI secretion system effector, Hcp CH61_RS07050 PF01568 Molydopterin dinucleotide binding domain CH61_RS07050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH61_RS07050 PF00384 Molybdopterin oxidoreductase CH61_RS07055 PF13247 4Fe-4S dicluster domain CH61_RS07055 PF12800 4Fe-4S binding domain CH61_RS07060 PF04976 DMSO reductase anchor subunit (DmsC) CH61_RS07065 PF02613 Nitrate reductase delta subunit CH61_RS07075 PF05643 Putative bacterial lipoprotein (DUF799) CH61_RS07085 PF03783 Curli production assembly/transport component CsgG CH61_RS07095 PF01292 Prokaryotic cytochrome b561 CH61_RS07100 PF00155 Aminotransferase class I and II CH61_RS07105 PF07350 Protein of unknown function (DUF1479) CH61_RS07110 PF02685 Glucokinase CH61_RS07120 PF03466 LysR substrate binding domain CH61_RS07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS07125 PF00248 Aldo/keto reductase family CH61_RS07135 PF01566 Natural resistance-associated macrophage protein CH61_RS07140 PF07662 Na+ dependent nucleoside transporter C-terminus CH61_RS07140 PF07670 Nucleoside recognition CH61_RS07140 PF01773 Na+ dependent nucleoside transporter N-terminus CH61_RS07165 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH61_RS07170 PF01797 Transposase IS200 like CH61_RS07195 PF12843 Putative quorum-sensing-regulated virulence factor CH61_RS07200 PF00533 BRCA1 C Terminus (BRCT) domain CH61_RS07200 PF12826 Helix-hairpin-helix motif CH61_RS07200 PF03120 NAD-dependent DNA ligase OB-fold domain CH61_RS07200 PF01653 NAD-dependent DNA ligase adenylation domain CH61_RS07200 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CH61_RS07205 PF04354 ZipA, C-terminal FtsZ-binding domain CH61_RS07215 PF00291 Pyridoxal-phosphate dependent enzyme CH61_RS07220 PF00381 PTS HPr component phosphorylation site CH61_RS07225 PF02896 PEP-utilising enzyme, TIM barrel domain CH61_RS07225 PF00391 PEP-utilising enzyme, mobile domain CH61_RS07225 PF05524 PEP-utilising enzyme, N-terminal CH61_RS07230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH61_RS07235 PF01797 Transposase IS200 like CH61_RS07245 PF16527 Two-component sensor protein CpxA, periplasmic domain CH61_RS07245 PF00672 HAMP domain CH61_RS07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS07245 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS07250 PF00486 Transcriptional regulatory protein, C terminal CH61_RS07250 PF00072 Response regulator receiver domain CH61_RS07255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH61_RS07260 PF00005 ABC transporter CH61_RS07260 PF02687 FtsX-like permease family CH61_RS07260 PF12704 MacB-like periplasmic core domain CH61_RS07265 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS07265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH61_RS07270 PF00474 Sodium:solute symporter family CH61_RS07280 PF00557 Metallopeptidase family M24 CH61_RS07290 PF00155 Aminotransferase class I and II CH61_RS07300 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS07300 PF00672 HAMP domain CH61_RS07305 PF00486 Transcriptional regulatory protein, C terminal CH61_RS07305 PF00072 Response regulator receiver domain CH61_RS07315 PF00291 Pyridoxal-phosphate dependent enzyme CH61_RS07320 PF00005 ABC transporter CH61_RS07325 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS07330 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS07340 PF07690 Major Facilitator Superfamily CH61_RS07345 PF01418 Helix-turn-helix domain, rpiR family CH61_RS07345 PF01380 SIS domain CH61_RS07355 PF04074 YhcH/YjgK/YiaL CH61_RS07360 PF00480 ROK family CH61_RS07365 PF12468 Type III secretion system leucine rich repeat protein CH61_RS07370 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CH61_RS07375 PF00701 Dihydrodipicolinate synthetase family CH61_RS07380 PF04261 Dyp-type peroxidase family CH61_RS07385 PF06572 Protein of unknown function (DUF1131) CH61_RS07390 PF04076 Bacterial OB fold (BOF) protein CH61_RS07395 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS07395 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH61_RS07395 PF03212 Pertactin CH61_RS07395 PF03797 Autotransporter beta-domain CH61_RS07410 PF00583 Acetyltransferase (GNAT) family CH61_RS07415 PF01218 Coproporphyrinogen III oxidase CH61_RS07420 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CH61_RS07425 PF00390 Malic enzyme, N-terminal domain CH61_RS07425 PF01515 Phosphate acetyl/butaryl transferase CH61_RS07425 PF03949 Malic enzyme, NAD binding domain CH61_RS07430 PF00293 NUDIX domain CH61_RS07435 PF03264 NapC/NirT cytochrome c family, N-terminal region CH61_RS07440 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CH61_RS07445 PF01568 Molydopterin dinucleotide binding domain CH61_RS07445 PF00384 Molybdopterin oxidoreductase CH61_RS07445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH61_RS07445 PF10518 TAT (twin-arginine translocation) pathway signal sequence CH61_RS07450 PF03927 NapD protein CH61_RS07455 PF13187 4Fe-4S dicluster domain CH61_RS07455 PF12800 4Fe-4S binding domain CH61_RS07455 PF00037 4Fe-4S binding domain CH61_RS07460 PF00196 Bacterial regulatory proteins, luxR family CH61_RS07460 PF00072 Response regulator receiver domain CH61_RS07470 PF00873 AcrB/AcrD/AcrF family CH61_RS07480 PF04307 LexA-binding, inner membrane-associated putative hydrolase CH61_RS07485 PF13186 Iron-sulfur cluster-binding domain CH61_RS07485 PF04055 Radical SAM superfamily CH61_RS07490 PF00884 Sulfatase CH61_RS07495 PF08402 TOBE domain CH61_RS07495 PF00005 ABC transporter CH61_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS07515 PF03960 ArsC family CH61_RS07520 PF01546 Peptidase family M20/M25/M40 CH61_RS07520 PF07687 Peptidase dimerisation domain CH61_RS07525 PF02557 D-alanyl-D-alanine carboxypeptidase CH61_RS07530 PF13980 Uncharacterised protein family (UPF0370) CH61_RS07535 PF08351 Domain of unknown function (DUF1726) CH61_RS07535 PF13718 GNAT acetyltransferase 2 CH61_RS07535 PF05127 Helicase CH61_RS07535 PF17176 tRNA-binding domain CH61_RS07540 PF04284 Protein of unknown function (DUF441) CH61_RS07545 PF04228 Putative neutral zinc metallopeptidase CH61_RS07550 PF01259 SAICAR synthetase CH61_RS07555 PF01797 Transposase IS200 like CH61_RS07565 PF06804 NlpB/DapX lipoprotein CH61_RS07570 PF00701 Dihydrodipicolinate synthetase family CH61_RS07575 PF01842 ACT domain CH61_RS07580 PF00578 AhpC/TSA family CH61_RS07600 PF01594 AI-2E family transporter CH61_RS07605 PF07720 Tetratricopeptide repeat CH61_RS07605 PF01435 Peptidase family M48 CH61_RS07610 PF03960 ArsC family CH61_RS07615 PF00308 Bacterial dnaA protein CH61_RS07620 PF01797 Transposase IS200 like CH61_RS07630 PF01406 tRNA synthetases class I (C) catalytic domain CH61_RS07630 PF09190 DALR domain CH61_RS07635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CH61_RS07640 PF00149 Calcineurin-like phosphoesterase CH61_RS07645 PF00731 AIR carboxylase CH61_RS07650 PF02222 ATP-grasp domain CH61_RS07650 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CH61_RS07660 PF00005 ABC transporter CH61_RS07665 PF13472 GDSL-like Lipase/Acylhydrolase family CH61_RS07670 PF00106 short chain dehydrogenase CH61_RS07675 PF00085 Thioredoxin CH61_RS07680 PF01145 SPFH domain / Band 7 family CH61_RS07680 PF16200 C-terminal region of band_7 CH61_RS07685 PF01957 NfeD-like C-terminal, partner-binding CH61_RS07690 PF13411 MerR HTH family regulatory protein CH61_RS07695 PF00403 Heavy-metal-associated domain CH61_RS07700 PF01963 TraB family CH61_RS07705 PF04073 Aminoacyl-tRNA editing domain CH61_RS07720 PF02872 5'-nucleotidase, C-terminal domain CH61_RS07720 PF00149 Calcineurin-like phosphoesterase CH61_RS07725 PF02872 5'-nucleotidase, C-terminal domain CH61_RS07725 PF00149 Calcineurin-like phosphoesterase CH61_RS07730 PF00149 Calcineurin-like phosphoesterase CH61_RS07730 PF02872 5'-nucleotidase, C-terminal domain CH61_RS07735 PF07690 Major Facilitator Superfamily CH61_RS07740 PF00999 Sodium/hydrogen exchanger family CH61_RS07740 PF02254 TrkA-N domain CH61_RS07745 PF00294 pfkB family carbohydrate kinase CH61_RS07750 PF02706 Chain length determinant protein CH61_RS07755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH61_RS07755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH61_RS07755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH61_RS07755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH61_RS07760 PF00535 Glycosyl transferase family 2 CH61_RS07765 PF00483 Nucleotidyl transferase CH61_RS07765 PF01050 Mannose-6-phosphate isomerase CH61_RS07780 PF00534 Glycosyl transferases group 1 CH61_RS07780 PF13439 Glycosyltransferase Family 4 CH61_RS07810 PF01370 NAD dependent epimerase/dehydratase family CH61_RS07815 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH61_RS07820 PF16363 GDP-mannose 4,6 dehydratase CH61_RS07825 PF16363 GDP-mannose 4,6 dehydratase CH61_RS07830 PF00483 Nucleotidyl transferase CH61_RS07835 PF00175 Oxidoreductase NAD-binding domain CH61_RS07835 PF00970 Oxidoreductase FAD-binding domain CH61_RS07835 PF00111 2Fe-2S iron-sulfur cluster binding domain CH61_RS07840 PF00762 Ferrochelatase CH61_RS07845 PF05191 Adenylate kinase, active site lid CH61_RS07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS07850 PF00183 Hsp90 protein CH61_RS07855 PF02132 RecR protein CH61_RS07855 PF13662 Toprim domain CH61_RS07860 PF02575 YbaB/EbfC DNA-binding family CH61_RS07865 PF12169 DNA polymerase III subunits gamma and tau domain III CH61_RS07865 PF12170 DNA polymerase III tau subunit V interacting with alpha CH61_RS07865 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CH61_RS07870 PF00156 Phosphoribosyl transferase domain CH61_RS07875 PF01695 IstB-like ATP binding protein CH61_RS07890 PF02796 Helix-turn-helix domain of resolvase CH61_RS07890 PF00665 Integrase core domain CH61_RS07895 PF04304 Protein of unknown function (DUF454) CH61_RS07905 PF10689 Protein of unknown function (DUF2496) CH61_RS07910 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH61_RS07910 PF00924 Mechanosensitive ion channel CH61_RS07910 PF12795 Mechanosensitive ion channel porin domain CH61_RS07915 PF02635 DsrE/DsrF-like family CH61_RS07920 PF08361 MAATS-type transcriptional repressor, C-terminal region CH61_RS07920 PF00440 Bacterial regulatory proteins, tetR family CH61_RS07925 PF00529 HlyD membrane-fusion protein of T1SS CH61_RS07925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH61_RS07930 PF00873 AcrB/AcrD/AcrF family CH61_RS07935 PF01197 Ribosomal protein L31 CH61_RS07940 PF00444 Ribosomal protein L36 CH61_RS07950 PF10757 Biofilm formation regulator YbaJ CH61_RS07955 PF05321 Haemolysin expression modulating protein CH61_RS07960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH61_RS07965 PF09619 Type III secretion system lipoprotein chaperone (YscW) CH61_RS07975 PF00909 Ammonium Transporter Family CH61_RS07980 PF00543 Nitrogen regulatory protein P-II CH61_RS07985 PF00664 ABC transporter transmembrane region CH61_RS07985 PF00005 ABC transporter CH61_RS07990 PF00005 ABC transporter CH61_RS07990 PF00664 ABC transporter transmembrane region CH61_RS07995 PF13404 AsnC-type helix-turn-helix domain CH61_RS07995 PF01037 Lrp/AsnC ligand binding domain CH61_RS08000 PF00291 Pyridoxal-phosphate dependent enzyme CH61_RS08010 PF12793 Sugar transport-related sRNA regulator N-term CH61_RS08010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH61_RS08015 PF06508 Queuosine biosynthesis protein QueC CH61_RS08030 PF13145 PPIC-type PPIASE domain CH61_RS08035 PF00216 Bacterial DNA-binding protein CH61_RS08040 PF02190 ATP-dependent protease La (LON) substrate-binding domain CH61_RS08040 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS08040 PF05362 Lon protease (S16) C-terminal proteolytic domain CH61_RS08045 PF07724 AAA domain (Cdc48 subfamily) CH61_RS08045 PF10431 C-terminal, D2-small domain, of ClpB protein CH61_RS08045 PF06689 ClpX C4-type zinc finger CH61_RS08050 PF00574 Clp protease CH61_RS08055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH61_RS08055 PF05698 Bacterial trigger factor protein (TF) C-terminus CH61_RS08055 PF05697 Bacterial trigger factor protein (TF) CH61_RS08065 PF01722 BolA-like protein CH61_RS08070 PF03923 Uncharacterized lipoprotein CH61_RS08070 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH61_RS08075 PF07690 Major Facilitator Superfamily CH61_RS08080 PF03502 Nucleoside-specific channel-forming protein, Tsx CH61_RS08085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CH61_RS08085 PF06481 COX Aromatic Rich Motif CH61_RS08090 PF00115 Cytochrome C and Quinol oxidase polypeptide I CH61_RS08095 PF00510 Cytochrome c oxidase subunit III CH61_RS08100 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CH61_RS08105 PF01040 UbiA prenyltransferase family CH61_RS08110 PF07690 Major Facilitator Superfamily CH61_RS08115 PF04461 Protein of unknown function (DUF520) CH61_RS08120 PF08546 Ketopantoate reductase PanE/ApbA C terminal CH61_RS08120 PF02558 Ketopantoate reductase PanE/ApbA CH61_RS08125 PF01965 DJ-1/PfpI family CH61_RS08130 PF02568 Thiamine biosynthesis protein (ThiI) CH61_RS08130 PF02926 THUMP domain CH61_RS08140 PF02609 Exonuclease VII small subunit CH61_RS08145 PF00348 Polyprenyl synthetase CH61_RS08150 PF02780 Transketolase, C-terminal domain CH61_RS08150 PF02779 Transketolase, pyrimidine binding domain CH61_RS08150 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CH61_RS08155 PF01797 Transposase IS200 like CH61_RS08165 PF04608 Phosphatidylglycerophosphatase A CH61_RS08170 PF00586 AIR synthase related protein, N-terminal domain CH61_RS08170 PF02769 AIR synthase related protein, C-terminal domain CH61_RS08175 PF01029 NusB family CH61_RS08180 PF00885 6,7-dimethyl-8-ribityllumazine synthase CH61_RS08185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH61_RS08185 PF01872 RibD C-terminal domain CH61_RS08190 PF03477 ATP cone domain CH61_RS08205 PF01797 Transposase IS200 like CH61_RS08210 PF07549 SecD/SecF GG Motif CH61_RS08210 PF02355 Protein export membrane protein CH61_RS08215 PF02355 Protein export membrane protein CH61_RS08215 PF13721 SecD export protein N-terminal TM region CH61_RS08215 PF07549 SecD/SecF GG Motif CH61_RS08220 PF02699 Preprotein translocase subunit CH61_RS08225 PF01702 Queuine tRNA-ribosyltransferase CH61_RS08230 PF02547 Queuosine biosynthesis protein CH61_RS08235 PF04336 Acyl carrier protein phosphodiesterase CH61_RS08240 PF00578 AhpC/TSA family CH61_RS08240 PF10417 C-terminal domain of 1-Cys peroxiredoxin CH61_RS08245 PF01797 Transposase IS200 like CH61_RS08270 PF00128 Alpha amylase, catalytic domain CH61_RS08270 PF02903 Alpha amylase, N-terminal ig-like domain CH61_RS08275 PF00324 Amino acid permease CH61_RS08280 PF05525 Branched-chain amino acid transport protein CH61_RS08285 PF12849 PBP superfamily domain CH61_RS08290 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS08290 PF00989 PAS fold CH61_RS08290 PF11808 Phosphate regulon sensor protein PhoR CH61_RS08295 PF00072 Response regulator receiver domain CH61_RS08295 PF00486 Transcriptional regulatory protein, C terminal CH61_RS08305 PF00149 Calcineurin-like phosphoesterase CH61_RS08305 PF12320 Type 5 capsule protein repressor C-terminal domain CH61_RS08310 PF13476 AAA domain CH61_RS08315 PF01695 IstB-like ATP binding protein CH61_RS08320 PF00665 Integrase core domain CH61_RS08320 PF02796 Helix-turn-helix domain of resolvase CH61_RS08325 PF00480 ROK family CH61_RS08330 PF04381 Putative exonuclease, RdgC CH61_RS08335 PF06865 Pyrimidine/purine nucleoside phosphorylase CH61_RS08345 PF01202 Shikimate kinase CH61_RS08360 PF08241 Methyltransferase domain CH61_RS08370 PF07317 Flagellar regulator YcgR CH61_RS08370 PF07238 PilZ domain CH61_RS08375 PF00171 Aldehyde dehydrogenase family CH61_RS08380 PF01472 PUA domain CH61_RS08380 PF00696 Amino acid kinase family CH61_RS08385 PF07417 Sigma factor-binding transcriptional regulator Crl CH61_RS08390 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CH61_RS08395 PF00156 Phosphoribosyl transferase domain CH61_RS08420 PF01546 Peptidase family M20/M25/M40 CH61_RS08420 PF07687 Peptidase dimerisation domain CH61_RS08425 PF11798 IMS family HHH motif CH61_RS08425 PF11799 impB/mucB/samB family C-terminal domain CH61_RS08425 PF00817 impB/mucB/samB family CH61_RS08430 PF03009 Glycerophosphoryl diester phosphodiesterase family CH61_RS08440 PF02424 ApbE family CH61_RS08445 PF00111 2Fe-2S iron-sulfur cluster binding domain CH61_RS08445 PF00175 Oxidoreductase NAD-binding domain CH61_RS08445 PF00970 Oxidoreductase FAD-binding domain CH61_RS08450 PF02508 Rnf-Nqr subunit, membrane protein CH61_RS08455 PF02508 Rnf-Nqr subunit, membrane protein CH61_RS08460 PF04205 FMN-binding domain CH61_RS08465 PF03116 NQR2, RnfD, RnfE family CH61_RS08470 PF11973 NQRA C-terminal domain CH61_RS08470 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CH61_RS08475 PF03734 L,D-transpeptidase catalytic domain CH61_RS08480 PF13230 Glutamine amidotransferases class-II CH61_RS08485 PF13580 SIS domain CH61_RS08490 PF09317 Domain of unknown function (DUF1974) CH61_RS08490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CH61_RS08490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CH61_RS08500 PF18254 HMW1 domain 2 CH61_RS08500 PF18071 HMW1C N-terminal CH61_RS08505 PF05860 haemagglutination activity domain CH61_RS08510 PF08479 POTRA domain, ShlB-type CH61_RS08510 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH61_RS08515 PF07687 Peptidase dimerisation domain CH61_RS08515 PF01546 Peptidase family M20/M25/M40 CH61_RS08520 PF00266 Aminotransferase class-V CH61_RS08525 PF02796 Helix-turn-helix domain of resolvase CH61_RS08525 PF00665 Integrase core domain CH61_RS08535 PF01695 IstB-like ATP binding protein CH61_RS08540 PF13356 Arm DNA-binding domain CH61_RS08540 PF00589 Phage integrase family CH61_RS08545 PF01527 Transposase CH61_RS08550 PF00589 Phage integrase family CH61_RS08550 PF13356 Arm DNA-binding domain CH61_RS08560 PF12697 Alpha/beta hydrolase family CH61_RS08570 PF01402 Ribbon-helix-helix protein, copG family CH61_RS08575 PF00258 Flavodoxin CH61_RS08580 PF01475 Ferric uptake regulator family CH61_RS08590 PF03573 outer membrane porin, OprD family CH61_RS08595 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH61_RS08595 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CH61_RS08600 PF01797 Transposase IS200 like CH61_RS08605 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH61_RS08605 PF00367 phosphotransferase system, EIIB CH61_RS08605 PF02378 Phosphotransferase system, EIIC CH61_RS08610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CH61_RS08615 PF01979 Amidohydrolase family CH61_RS08620 PF01047 MarR family CH61_RS08620 PF00480 ROK family CH61_RS08625 PF13344 Haloacid dehalogenase-like hydrolase CH61_RS08630 PF00733 Asparagine synthase CH61_RS08630 PF13537 Glutamine amidotransferase domain CH61_RS08665 PF01494 FAD binding domain CH61_RS08670 PF04055 Radical SAM superfamily CH61_RS08670 PF01938 TRAM domain CH61_RS08670 PF00919 Uncharacterized protein family UPF0004 CH61_RS08675 PF02562 PhoH-like protein CH61_RS08680 PF02130 Uncharacterized protein family UPF0054 CH61_RS08685 PF03471 Transporter associated domain CH61_RS08685 PF00571 CBS domain CH61_RS08690 PF00795 Carbon-nitrogen hydrolase CH61_RS08695 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS08700 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS08710 PF00005 ABC transporter CH61_RS08715 PF07295 Zinc-ribbon containing domain CH61_RS08720 PF00133 tRNA synthetases class I (I, L, M and V) CH61_RS08720 PF13603 Leucyl-tRNA synthetase, Domain 2 CH61_RS08720 PF08264 Anticodon-binding domain of tRNA CH61_RS08725 PF04390 Lipopolysaccharide-assembly CH61_RS08730 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CH61_RS08730 PF06144 DNA polymerase III, delta subunit CH61_RS08735 PF01467 Cytidylyltransferase-like CH61_RS08745 PF02590 Predicted SPOUT methyltransferase CH61_RS08750 PF00905 Penicillin binding protein transpeptidase domain CH61_RS08750 PF03717 Penicillin-binding Protein dimerisation domain CH61_RS08755 PF01098 Cell cycle protein CH61_RS08760 PF05036 Sporulation related domain CH61_RS08760 PF03330 Lytic transglycolase CH61_RS08765 PF00768 D-alanyl-D-alanine carboxypeptidase CH61_RS08765 PF07943 Penicillin-binding protein 5, C-terminal domain CH61_RS08770 PF04359 Protein of unknown function (DUF493) CH61_RS08775 PF03099 Biotin/lipoate A/B protein ligase family CH61_RS08780 PF04055 Radical SAM superfamily CH61_RS08780 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CH61_RS08785 PF02416 mttA/Hcf106 family CH61_RS08795 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH61_RS08800 PF00313 'Cold-shock' DNA-binding domain CH61_RS08810 PF00196 Bacterial regulatory proteins, luxR family CH61_RS08835 PF00005 ABC transporter CH61_RS08835 PF00664 ABC transporter transmembrane region CH61_RS08845 PF04962 KduI/IolB family CH61_RS08850 PF01261 Xylose isomerase-like TIM barrel CH61_RS08855 PF00294 pfkB family carbohydrate kinase CH61_RS08860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH61_RS08860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH61_RS08865 PF02653 Branched-chain amino acid transport system / permease component CH61_RS08870 PF00005 ABC transporter CH61_RS08875 PF13407 Periplasmic binding protein domain CH61_RS08885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH61_RS08885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH61_RS08885 PF00205 Thiamine pyrophosphate enzyme, central domain CH61_RS08890 PF00171 Aldehyde dehydrogenase family CH61_RS08905 PF07703 Alpha-2-macroglobulin bait region domain CH61_RS08905 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CH61_RS08905 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CH61_RS08905 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CH61_RS08905 PF00207 Alpha-2-macroglobulin family CH61_RS08905 PF01835 MG2 domain CH61_RS08905 PF17962 Bacterial macroglobulin domain 6 CH61_RS08910 PF00912 Transglycosylase CH61_RS08910 PF00905 Penicillin binding protein transpeptidase domain CH61_RS08910 PF06832 Penicillin-Binding Protein C-terminus Family CH61_RS08915 PF00872 Transposase, Mutator family CH61_RS08925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH61_RS08930 PF00356 Bacterial regulatory proteins, lacI family CH61_RS08930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH61_RS08935 PF07085 DRTGG domain CH61_RS08935 PF01515 Phosphate acetyl/butaryl transferase CH61_RS08940 PF00871 Acetokinase family CH61_RS08950 PF04217 Protein of unknown function, DUF412 CH61_RS08955 PF03887 YfbU domain CH61_RS08960 PF13419 Haloacid dehalogenase-like hydrolase CH61_RS08965 PF03600 Citrate transporter CH61_RS08965 PF02080 TrkA-C domain CH61_RS08980 PF00155 Aminotransferase class I and II CH61_RS08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS08990 PF03466 LysR substrate binding domain CH61_RS08995 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CH61_RS09000 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CH61_RS09005 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CH61_RS09005 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CH61_RS09015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CH61_RS09015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH61_RS09015 PF10531 SLBB domain CH61_RS09020 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CH61_RS09020 PF01568 Molydopterin dinucleotide binding domain CH61_RS09020 PF00384 Molybdopterin oxidoreductase CH61_RS09020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH61_RS09025 PF00146 NADH dehydrogenase CH61_RS09030 PF12838 4Fe-4S dicluster domain CH61_RS09035 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CH61_RS09040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CH61_RS09045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CH61_RS09045 PF00361 Proton-conducting membrane transporter CH61_RS09050 PF00361 Proton-conducting membrane transporter CH61_RS09055 PF00361 Proton-conducting membrane transporter CH61_RS09065 PF04074 YhcH/YjgK/YiaL CH61_RS09070 PF01202 Shikimate kinase CH61_RS09075 PF00106 short chain dehydrogenase CH61_RS09080 PF02638 Glycosyl hydrolase-like 10 CH61_RS09085 PF00356 Bacterial regulatory proteins, lacI family CH61_RS09095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH61_RS09095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH61_RS09100 PF07690 Major Facilitator Superfamily CH61_RS09105 PF03928 Haem-degrading CH61_RS09110 PF00920 Dehydratase family CH61_RS09125 PF05957 Bacterial protein of unknown function (DUF883) CH61_RS09135 PF00425 chorismate binding enzyme CH61_RS09140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH61_RS09140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH61_RS09140 PF16582 Middle domain of thiamine pyrophosphate CH61_RS09145 PF12697 Alpha/beta hydrolase family CH61_RS09150 PF00378 Enoyl-CoA hydratase/isomerase CH61_RS09155 PF13378 Enolase C-terminal domain-like CH61_RS09160 PF00501 AMP-binding enzyme CH61_RS09160 PF13193 AMP-binding enzyme C-terminal domain CH61_RS09165 PF02885 Glycosyl transferase family, helical bundle domain CH61_RS09170 PF07338 Protein of unknown function (DUF1471) CH61_RS09175 PF05971 RNA methyltransferase CH61_RS09180 PF01695 IstB-like ATP binding protein CH61_RS09185 PF00665 Integrase core domain CH61_RS09185 PF02796 Helix-turn-helix domain of resolvase CH61_RS09190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH61_RS09190 PF13426 PAS domain CH61_RS09190 PF08447 PAS fold CH61_RS09195 PF00005 ABC transporter CH61_RS09200 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS09205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS09215 PF00210 Ferritin-like domain CH61_RS09220 PF13649 Methyltransferase domain CH61_RS09230 PF00892 EamA-like transporter family CH61_RS09235 PF13505 Outer membrane protein beta-barrel domain CH61_RS09255 PF08240 Alcohol dehydrogenase GroES-like domain CH61_RS09255 PF00107 Zinc-binding dehydrogenase CH61_RS09260 PF13407 Periplasmic binding protein domain CH61_RS09265 PF00005 ABC transporter CH61_RS09270 PF02653 Branched-chain amino acid transport system / permease component CH61_RS09275 PF00356 Bacterial regulatory proteins, lacI family CH61_RS09280 PF03466 LysR substrate binding domain CH61_RS09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS09285 PF00180 Isocitrate/isopropylmalate dehydrogenase CH61_RS09295 PF02028 BCCT, betaine/carnitine/choline family transporter CH61_RS09300 PF00355 Rieske [2Fe-2S] domain CH61_RS09300 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CH61_RS09305 PF00970 Oxidoreductase FAD-binding domain CH61_RS09305 PF00111 2Fe-2S iron-sulfur cluster binding domain CH61_RS09305 PF00175 Oxidoreductase NAD-binding domain CH61_RS09310 PF08479 POTRA domain, ShlB-type CH61_RS09310 PF17287 POTRA domain CH61_RS09310 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH61_RS09315 PF04829 Pre-toxin domain with VENN motif CH61_RS09315 PF05860 haemagglutination activity domain CH61_RS09315 PF13332 Hemagglutinin repeat CH61_RS09315 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS09335 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS09335 PF05860 haemagglutination activity domain CH61_RS09335 PF13332 Hemagglutinin repeat CH61_RS09335 PF04829 Pre-toxin domain with VENN motif CH61_RS09355 PF04829 Pre-toxin domain with VENN motif CH61_RS09355 PF05860 haemagglutination activity domain CH61_RS09355 PF15526 Novel toxin 21 CH61_RS09355 PF05594 Haemagluttinin repeat CH61_RS09355 PF13332 Hemagglutinin repeat CH61_RS09365 PF00005 ABC transporter CH61_RS09365 PF17912 MalK OB fold domain CH61_RS09370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH61_RS09370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH61_RS09370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH61_RS09370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH61_RS09375 PF00356 Bacterial regulatory proteins, lacI family CH61_RS09385 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS09390 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS09395 PF04041 beta-1,4-mannooligosaccharide phosphorylase CH61_RS09415 PF00924 Mechanosensitive ion channel CH61_RS09420 PF01867 CRISPR associated protein Cas1 CH61_RS09435 PF09611 CRISPR-associated protein (Cas_Csy1) CH61_RS09440 PF09614 CRISPR-associated protein (Cas_Csy2) CH61_RS09445 PF09615 CRISPR-associated protein (Cas_Csy3) CH61_RS09450 PF09618 CRISPR-associated protein (Cas_Csy4) CH61_RS09455 PF00248 Aldo/keto reductase family CH61_RS09465 PF00083 Sugar (and other) transporter CH61_RS09475 PF03466 LysR substrate binding domain CH61_RS09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS09480 PF03472 Autoinducer binding domain CH61_RS09480 PF00196 Bacterial regulatory proteins, luxR family CH61_RS09485 PF00765 Autoinducer synthase CH61_RS09510 PF00581 Rhodanese-like domain CH61_RS09510 PF17773 UPF0176 acylphosphatase like domain CH61_RS09510 PF12368 Rhodanase C-terminal CH61_RS09515 PF01594 AI-2E family transporter CH61_RS09520 PF00196 Bacterial regulatory proteins, luxR family CH61_RS09525 PF01266 FAD dependent oxidoreductase CH61_RS09530 PF00872 Transposase, Mutator family CH61_RS09535 PF13419 Haloacid dehalogenase-like hydrolase CH61_RS09540 PF14002 YniB-like protein CH61_RS09545 PF03881 Fructosamine kinase CH61_RS09555 PF00950 ABC 3 transport family CH61_RS09560 PF00950 ABC 3 transport family CH61_RS09565 PF00005 ABC transporter CH61_RS09570 PF01297 Zinc-uptake complex component A periplasmic CH61_RS09575 PF01464 Transglycosylase SLT domain CH61_RS09580 PF01914 MarC family integral membrane protein CH61_RS09595 PF13619 KTSC domain CH61_RS09600 PF02824 TGS domain CH61_RS09600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH61_RS09600 PF03129 Anticodon binding domain CH61_RS09600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH61_RS09605 PF05198 Translation initiation factor IF-3, N-terminal domain CH61_RS09605 PF00707 Translation initiation factor IF-3, C-terminal domain CH61_RS09610 PF01632 Ribosomal protein L35 CH61_RS09615 PF00453 Ribosomal protein L20 CH61_RS09620 PF01409 tRNA synthetases class II core domain (F) CH61_RS09620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CH61_RS09625 PF03483 B3/4 domain CH61_RS09625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CH61_RS09625 PF01588 Putative tRNA binding domain CH61_RS09625 PF03147 Ferredoxin-fold anticodon binding domain CH61_RS09625 PF03484 tRNA synthetase B5 domain CH61_RS09630 PF00216 Bacterial DNA-binding protein CH61_RS09640 PF01032 FecCD transport family CH61_RS09645 PF00255 Glutathione peroxidase CH61_RS09650 PF00005 ABC transporter CH61_RS09655 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH61_RS09660 PF00535 Glycosyl transferase family 2 CH61_RS09665 PF01370 NAD dependent epimerase/dehydratase family CH61_RS09665 PF00551 Formyl transferase CH61_RS09665 PF02911 Formyl transferase, C-terminal domain CH61_RS09670 PF01522 Polysaccharide deacetylase CH61_RS09675 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CH61_RS09680 PF00892 EamA-like transporter family CH61_RS09690 PF00877 NlpC/P60 family CH61_RS09695 PF03099 Biotin/lipoate A/B protein ligase family CH61_RS09695 PF10437 Bacterial lipoate protein ligase C-terminus CH61_RS09705 PF00793 DAHP synthetase I family CH61_RS09710 PF03618 Kinase/pyrophosphorylase CH61_RS09715 PF00391 PEP-utilising enzyme, mobile domain CH61_RS09715 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CH61_RS09715 PF02896 PEP-utilising enzyme, TIM barrel domain CH61_RS09720 PF01594 AI-2E family transporter CH61_RS09725 PF13183 4Fe-4S dicluster domain CH61_RS09725 PF02913 FAD linked oxidases, C-terminal domain CH61_RS09725 PF01565 FAD binding domain CH61_RS09730 PF03061 Thioesterase superfamily CH61_RS09740 PF01521 Iron-sulphur cluster biosynthesis CH61_RS09745 PF01458 Uncharacterized protein family (UPF0051) CH61_RS09750 PF00005 ABC transporter CH61_RS09755 PF01458 Uncharacterized protein family (UPF0051) CH61_RS09760 PF00266 Aminotransferase class-V CH61_RS09765 PF02657 Fe-S metabolism associated domain CH61_RS09770 PF17969 L,D-transpeptidase C-terminal domain CH61_RS09770 PF01476 LysM domain CH61_RS09770 PF03734 L,D-transpeptidase catalytic domain CH61_RS09775 PF01695 IstB-like ATP binding protein CH61_RS09785 PF01797 Transposase IS200 like CH61_RS09795 PF04728 Lipoprotein leucine-zipper CH61_RS09800 PF00224 Pyruvate kinase, barrel domain CH61_RS09800 PF02887 Pyruvate kinase, alpha/beta domain CH61_RS09815 PF01554 MatE CH61_RS09820 PF00677 Lumazine binding domain CH61_RS09830 PF07690 Major Facilitator Superfamily CH61_RS09835 PF03466 LysR substrate binding domain CH61_RS09835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS09840 PF00356 Bacterial regulatory proteins, lacI family CH61_RS09845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CH61_RS09845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CH61_RS09850 PF00877 NlpC/P60 family CH61_RS09860 PF00462 Glutaredoxin CH61_RS09865 PF00929 Exonuclease CH61_RS09870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH61_RS09875 PF14431 YwqJ-like deaminase CH61_RS09875 PF18807 Tripartite Tc toxins repeat CH61_RS09880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH61_RS09885 PF00440 Bacterial regulatory proteins, tetR family CH61_RS09885 PF16925 Tetracyclin repressor-like, C-terminal domain CH61_RS09890 PF00884 Sulfatase CH61_RS09890 PF08019 Phosphoethanolamine transferase EptA/EptB CH61_RS09895 PF06945 Protein of unknown function (DUF1289) CH61_RS09900 PF00248 Aldo/keto reductase family CH61_RS09905 PF01047 MarR family CH61_RS09910 PF05433 Glycine zipper 2TM domain CH61_RS09915 PF03702 Anhydro-N-acetylmuramic acid kinase CH61_RS09920 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CH61_RS09925 PF01243 Pyridoxamine 5'-phosphate oxidase CH61_RS09925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CH61_RS09930 PF01479 S4 domain CH61_RS09930 PF00579 tRNA synthetases class I (W and Y) CH61_RS09935 PF08543 Phosphomethylpyrimidine kinase CH61_RS09940 PF02798 Glutathione S-transferase, N-terminal domain CH61_RS09940 PF00043 Glutathione S-transferase, C-terminal domain CH61_RS09945 PF00665 Integrase core domain CH61_RS09945 PF02796 Helix-turn-helix domain of resolvase CH61_RS09950 PF01695 IstB-like ATP binding protein CH61_RS09955 PF11656 YjbD family (DUF3811) CH61_RS09960 PF04893 Yip1 domain CH61_RS09965 PF00854 POT family CH61_RS09975 PF00005 ABC transporter CH61_RS09980 PF00005 ABC transporter CH61_RS09980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH61_RS09985 PF12911 N-terminal TM domain of oligopeptide transport permease C CH61_RS09985 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS09990 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS09995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH61_RS10010 PF01797 Transposase IS200 like CH61_RS10015 PF02954 Bacterial regulatory protein, Fis family CH61_RS10015 PF00158 Sigma-54 interaction domain CH61_RS10020 PF04012 PspA/IM30 family CH61_RS10025 PF06667 Phage shock protein B CH61_RS10030 PF04024 PspC domain CH61_RS10040 PF04317 YcjX-like family, DUF463 CH61_RS10045 PF05128 Domain of unknown function (DUF697) CH61_RS10050 PF08808 RES domain CH61_RS10055 PF09722 Protein of unknown function (DUF2384) CH61_RS10060 PF18024 Helix-turn-helix domain CH61_RS10060 PF00158 Sigma-54 interaction domain CH61_RS10065 PF01797 Transposase IS200 like CH61_RS10070 PF08534 Redoxin CH61_RS10075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH61_RS10075 PF13378 Enolase C-terminal domain-like CH61_RS10080 PF00246 Zinc carboxypeptidase CH61_RS10085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH61_RS10090 PF01544 CorA-like Mg2+ transporter protein CH61_RS10105 PF07859 alpha/beta hydrolase fold CH61_RS10110 PF01171 PP-loop family CH61_RS10115 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CH61_RS10115 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CH61_RS10115 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CH61_RS10115 PF10371 Domain of unknown function CH61_RS10115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH61_RS10120 PF00893 Small Multidrug Resistance protein CH61_RS10125 PF02308 MgtC family CH61_RS10130 PF03891 Domain of unknown function (DUF333) CH61_RS10135 PF03724 META domain CH61_RS10140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH61_RS10140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH61_RS10145 PF11739 Dicarboxylate transport CH61_RS10150 PF13617 YnbE-like lipoprotein CH61_RS10155 PF07027 Protein of unknown function (DUF1318) CH61_RS10160 PF01232 Mannitol dehydrogenase Rossmann domain CH61_RS10160 PF08125 Mannitol dehydrogenase C-terminal domain CH61_RS10165 PF00325 Bacterial regulatory proteins, crp family CH61_RS10165 PF04198 Putative sugar-binding domain CH61_RS10170 PF02525 Flavodoxin-like fold CH61_RS10175 PF00271 Helicase conserved C-terminal domain CH61_RS10175 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CH61_RS10175 PF00270 DEAD/DEAH box helicase CH61_RS10175 PF11898 Domain of unknown function (DUF3418) CH61_RS10175 PF04408 Helicase associated domain (HA2) CH61_RS10190 PF00089 Trypsin CH61_RS10205 PF01292 Prokaryotic cytochrome b561 CH61_RS10210 PF04264 YceI-like domain CH61_RS10225 PF18807 Tripartite Tc toxins repeat CH61_RS10225 PF14431 YwqJ-like deaminase CH61_RS10235 PF01797 Transposase IS200 like CH61_RS10240 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CH61_RS10245 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS10245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS10245 PF00672 HAMP domain CH61_RS10250 PF00072 Response regulator receiver domain CH61_RS10250 PF00486 Transcriptional regulatory protein, C terminal CH61_RS10260 PF13520 Amino acid permease CH61_RS10265 PF07338 Protein of unknown function (DUF1471) CH61_RS10275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CH61_RS10275 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CH61_RS10275 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CH61_RS10280 PF02233 NAD(P) transhydrogenase beta subunit CH61_RS10285 PF00582 Universal stress protein family CH61_RS10290 PF13545 Crp-like helix-turn-helix domain CH61_RS10290 PF00027 Cyclic nucleotide-binding domain CH61_RS10295 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CH61_RS10295 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH61_RS10300 PF00245 Alkaline phosphatase CH61_RS10315 PF13419 Haloacid dehalogenase-like hydrolase CH61_RS10320 PF01842 ACT domain CH61_RS10325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH61_RS10325 PF00205 Thiamine pyrophosphate enzyme, central domain CH61_RS10325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH61_RS10350 PF01048 Phosphorylase superfamily CH61_RS10350 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CH61_RS10355 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS10360 PF09084 NMT1/THI5 like CH61_RS10365 PF13407 Periplasmic binding protein domain CH61_RS10375 PF00356 Bacterial regulatory proteins, lacI family CH61_RS10395 PF05707 Zonular occludens toxin (Zot) CH61_RS10445 PF00654 Voltage gated chloride channel CH61_RS10455 PF00480 ROK family CH61_RS10470 PF05472 DNA replication terminus site-binding protein (Ter protein) CH61_RS10475 PF00206 Lyase CH61_RS10475 PF10415 Fumarase C C-terminus CH61_RS10480 PF01238 Phosphomannose isomerase type I CH61_RS10485 PF06097 Bacterial protein of unknown function (DUF945) CH61_RS10495 PF13593 SBF-like CPA transporter family (DUF4137) CH61_RS10500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH61_RS10500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH61_RS10505 PF12833 Helix-turn-helix domain CH61_RS10505 PF02311 AraC-like ligand binding domain CH61_RS10510 PF02653 Branched-chain amino acid transport system / permease component CH61_RS10515 PF00005 ABC transporter CH61_RS10520 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH61_RS10525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS10530 PF11762 L-arabinose isomerase C-terminal domain CH61_RS10530 PF02610 L-arabinose isomerase CH61_RS10535 PF00005 ABC transporter CH61_RS10535 PF03412 Peptidase C39 family CH61_RS10535 PF00664 ABC transporter transmembrane region CH61_RS10545 PF13533 Biotin-lipoyl like CH61_RS10550 PF00005 ABC transporter CH61_RS10550 PF00664 ABC transporter transmembrane region CH61_RS10555 PF03412 Peptidase C39 family CH61_RS10555 PF00005 ABC transporter CH61_RS10555 PF00664 ABC transporter transmembrane region CH61_RS10560 PF10754 Protein of unknown function (DUF2569) CH61_RS10565 PF02508 Rnf-Nqr subunit, membrane protein CH61_RS10570 PF04060 Putative Fe-S cluster CH61_RS10575 PF10531 SLBB domain CH61_RS10575 PF13375 RnfC Barrel sandwich hybrid domain CH61_RS10575 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH61_RS10575 PF13237 4Fe-4S dicluster domain CH61_RS10580 PF12833 Helix-turn-helix domain CH61_RS10580 PF06445 GyrI-like small molecule binding domain CH61_RS10585 PF03116 NQR2, RnfD, RnfE family CH61_RS10590 PF04205 FMN-binding domain CH61_RS10595 PF02508 Rnf-Nqr subunit, membrane protein CH61_RS10600 PF00730 HhH-GPD superfamily base excision DNA repair protein CH61_RS10600 PF00633 Helix-hairpin-helix motif CH61_RS10600 PF10576 Iron-sulfur binding domain of endonuclease III CH61_RS10605 PF01370 NAD dependent epimerase/dehydratase family CH61_RS10610 PF07690 Major Facilitator Superfamily CH61_RS10615 PF00575 S1 RNA binding domain CH61_RS10615 PF00773 RNB domain CH61_RS10615 PF08206 Ribonuclease B OB domain CH61_RS10615 PF17876 Cold shock domain CH61_RS10620 PF02554 Carbon starvation protein CstA CH61_RS10620 PF13722 5TM C-terminal transporter carbon starvation CstA CH61_RS10625 PF04328 Selenoprotein, putative CH61_RS10630 PF00923 Transaldolase/Fructose-6-phosphate aldolase CH61_RS10640 PF00596 Class II Aldolase and Adducin N-terminal domain CH61_RS10645 PF05433 Glycine zipper 2TM domain CH61_RS10650 PF01253 Translation initiation factor SUI1 CH61_RS10655 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CH61_RS10665 PF18073 Rubredoxin metal binding domain CH61_RS10670 PF06305 Lipopolysaccharide assembly protein A domain CH61_RS10675 PF01569 PAP2 superfamily CH61_RS10680 PF00925 GTP cyclohydrolase II CH61_RS10685 PF00694 Aconitase C-terminal domain CH61_RS10685 PF00330 Aconitase family (aconitate hydratase) CH61_RS10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS10695 PF03466 LysR substrate binding domain CH61_RS10700 PF01751 Toprim domain CH61_RS10700 PF01131 DNA topoisomerase CH61_RS10700 PF01396 Topoisomerase DNA binding C4 zinc finger CH61_RS10700 PF08272 Topoisomerase I zinc-ribbon-like CH61_RS10710 PF10692 Protein of unknown function (DUF2498) CH61_RS10715 PF01343 Peptidase family S49 CH61_RS10715 PF08496 Peptidase family S49 N-terminal CH61_RS10720 PF00106 short chain dehydrogenase CH61_RS10725 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CH61_RS10730 PF00849 RNA pseudouridylate synthase CH61_RS10730 PF01479 S4 domain CH61_RS10735 PF01300 Telomere recombination CH61_RS10740 PF02811 PHP domain CH61_RS10755 PF04715 Anthranilate synthase component I, N terminal region CH61_RS10755 PF00425 chorismate binding enzyme CH61_RS10760 PF00117 Glutamine amidotransferase class-I CH61_RS10765 PF02885 Glycosyl transferase family, helical bundle domain CH61_RS10765 PF00591 Glycosyl transferase family, a/b domain CH61_RS10770 PF00218 Indole-3-glycerol phosphate synthase CH61_RS10770 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CH61_RS10775 PF00291 Pyridoxal-phosphate dependent enzyme CH61_RS10780 PF00290 Tryptophan synthase alpha chain CH61_RS10790 PF03922 OmpW family CH61_RS10815 PF04279 Intracellular septation protein A CH61_RS10820 PF03061 Thioesterase superfamily CH61_RS10825 PF00872 Transposase, Mutator family CH61_RS10830 PF03544 Gram-negative bacterial TonB protein C-terminal CH61_RS10835 PF03795 YCII-related domain CH61_RS10850 PF13505 Outer membrane protein beta-barrel domain CH61_RS10855 PF13091 PLD-like domain CH61_RS10855 PF13396 Phospholipase_D-nuclease N-terminal CH61_RS10860 PF04269 Protein of unknown function, DUF440 CH61_RS10875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH61_RS10875 PF00005 ABC transporter CH61_RS10880 PF00005 ABC transporter CH61_RS10880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH61_RS10885 PF12911 N-terminal TM domain of oligopeptide transport permease C CH61_RS10885 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS10895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH61_RS10900 PF01914 MarC family integral membrane protein CH61_RS10905 PF00465 Iron-containing alcohol dehydrogenase CH61_RS10905 PF00171 Aldehyde dehydrogenase family CH61_RS10910 PF02796 Helix-turn-helix domain of resolvase CH61_RS10910 PF00665 Integrase core domain CH61_RS10915 PF01695 IstB-like ATP binding protein CH61_RS10920 PF00265 Thymidine kinase CH61_RS10925 PF00816 H-NS histone family CH61_RS10930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CH61_RS10930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CH61_RS10930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CH61_RS10935 PF00072 Response regulator receiver domain CH61_RS10940 PF02810 SEC-C motif CH61_RS10945 PF01842 ACT domain CH61_RS10945 PF00551 Formyl transferase CH61_RS10960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS10960 PF03466 LysR substrate binding domain CH61_RS10965 PF03372 Endonuclease/Exonuclease/phosphatase family CH61_RS10970 PF00293 NUDIX domain CH61_RS10975 PF07383 Protein of unknown function (DUF1496) CH61_RS10980 PF01751 Toprim domain CH61_RS10980 PF01131 DNA topoisomerase CH61_RS10985 PF00586 AIR synthase related protein, N-terminal domain CH61_RS10985 PF02769 AIR synthase related protein, C-terminal domain CH61_RS10990 PF00881 Nitroreductase family CH61_RS10995 PF01343 Peptidase family S49 CH61_RS11000 PF17763 Glutaminase/Asparaginase C-terminal domain CH61_RS11000 PF00710 Asparaginase, N-terminal CH61_RS11005 PF00857 Isochorismatase family CH61_RS11010 PF07023 Protein of unknown function (DUF1315) CH61_RS11015 PF01641 SelR domain CH61_RS11020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CH61_RS11020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH61_RS11025 PF01263 Aldose 1-epimerase CH61_RS11030 PF06629 MltA-interacting protein MipA CH61_RS11035 PF06798 PrkA serine protein kinase C-terminal domain CH61_RS11035 PF08298 PrkA AAA domain CH61_RS11040 PF04285 Protein of unknown function (DUF444) CH61_RS11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS11050 PF03466 LysR substrate binding domain CH61_RS11055 PF05726 Pirin C-terminal cupin domain CH61_RS11055 PF02678 Pirin CH61_RS11060 PF07690 Major Facilitator Superfamily CH61_RS11065 PF01266 FAD dependent oxidoreductase CH61_RS11070 PF04293 SpoVR like protein CH61_RS11075 PF00392 Bacterial regulatory proteins, gntR family CH61_RS11075 PF07840 FadR C-terminal domain CH61_RS11080 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CH61_RS11085 PF02600 Disulfide bond formation protein DsbB CH61_RS11100 PF00266 Aminotransferase class-V CH61_RS11110 PF00872 Transposase, Mutator family CH61_RS11120 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CH61_RS11195 PF01797 Transposase IS200 like CH61_RS11285 PF00872 Transposase, Mutator family CH61_RS11350 PF06530 Phage antitermination protein Q CH61_RS11360 PF05772 NinB protein CH61_RS11375 PF01695 IstB-like ATP binding protein CH61_RS11385 PF00665 Integrase core domain CH61_RS11385 PF02796 Helix-turn-helix domain of resolvase CH61_RS11390 PF12167 Arm DNA-binding domain CH61_RS11390 PF00589 Phage integrase family CH61_RS11395 PF03692 Putative zinc- or iron-chelating domain CH61_RS11400 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH61_RS11405 PF13406 Transglycosylase SLT domain CH61_RS11410 PF05166 YcgL domain CH61_RS11415 PF03775 Septum formation inhibitor MinC, C-terminal domain CH61_RS11415 PF05209 Septum formation inhibitor MinC, N-terminal domain CH61_RS11420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CH61_RS11425 PF03776 Septum formation topological specificity factor MinE CH61_RS11430 PF00570 HRDC domain CH61_RS11430 PF01612 3'-5' exonuclease CH61_RS11435 PF13193 AMP-binding enzyme C-terminal domain CH61_RS11435 PF00501 AMP-binding enzyme CH61_RS11440 PF03843 Outer membrane lipoprotein Slp family CH61_RS11445 PF00814 Glycoprotease family CH61_RS11450 PF13307 Helicase C-terminal domain CH61_RS11450 PF04851 Type III restriction enzyme, res subunit CH61_RS11455 PF01042 Endoribonuclease L-PSP CH61_RS11460 PF00893 Small Multidrug Resistance protein CH61_RS11465 PF00893 Small Multidrug Resistance protein CH61_RS11470 PF01081 KDPG and KHG aldolase CH61_RS11480 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CH61_RS11480 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CH61_RS11485 PF01418 Helix-turn-helix domain, rpiR family CH61_RS11485 PF01380 SIS domain CH61_RS11490 PF00224 Pyruvate kinase, barrel domain CH61_RS11490 PF02887 Pyruvate kinase, alpha/beta domain CH61_RS11495 PF03279 Bacterial lipid A biosynthesis acyltransferase CH61_RS11500 PF01551 Peptidase family M23 CH61_RS11500 PF01476 LysM domain CH61_RS11500 PF08525 Opacity-associated protein A N-terminal motif CH61_RS11505 PF01297 Zinc-uptake complex component A periplasmic CH61_RS11510 PF00005 ABC transporter CH61_RS11515 PF00950 ABC 3 transport family CH61_RS11520 PF17864 RuvB AAA lid domain CH61_RS11520 PF05491 RuvB C-terminal winged helix domain CH61_RS11520 PF05496 Holliday junction DNA helicase RuvB P-loop domain CH61_RS11525 PF01330 RuvA N terminal domain CH61_RS11525 PF07499 RuvA, C-terminal domain CH61_RS11530 PF02075 Crossover junction endodeoxyribonuclease RuvC CH61_RS11535 PF01709 Transcriptional regulator CH61_RS11540 PF00293 NUDIX domain CH61_RS11545 PF00152 tRNA synthetases class II (D, K and N) CH61_RS11545 PF02938 GAD domain CH61_RS11545 PF01336 OB-fold nucleic acid binding domain CH61_RS11550 PF01904 Protein of unknown function DUF72 CH61_RS11555 PF01124 MAPEG family CH61_RS11560 PF13649 Methyltransferase domain CH61_RS11565 PF08003 Protein of unknown function (DUF1698) CH61_RS11570 PF03932 CutC family CH61_RS11575 PF06185 YecM protein CH61_RS11580 PF00750 tRNA synthetases class I (R) CH61_RS11580 PF03485 Arginyl tRNA synthetase N terminal domain CH61_RS11580 PF05746 DALR anticodon binding domain CH61_RS11585 PF13332 Hemagglutinin repeat CH61_RS11585 PF05860 haemagglutination activity domain CH61_RS11590 PF17287 POTRA domain CH61_RS11590 PF08479 POTRA domain, ShlB-type CH61_RS11590 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH61_RS11595 PF03023 Lipid II flippase MurJ CH61_RS11600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH61_RS11605 PF13302 Acetyltransferase (GNAT) domain CH61_RS11610 PF07690 Major Facilitator Superfamily CH61_RS11615 PF07273 Protein of unknown function (DUF1439) CH61_RS11620 PF02613 Nitrate reductase delta subunit CH61_RS11625 PF02811 PHP domain CH61_RS11635 PF01325 Iron dependent repressor, N-terminal DNA binding domain CH61_RS11635 PF00480 ROK family CH61_RS11640 PF03009 Glycerophosphoryl diester phosphodiesterase family CH61_RS11645 PF08402 TOBE domain CH61_RS11645 PF00005 ABC transporter CH61_RS11650 PF01797 Transposase IS200 like CH61_RS11655 PF08402 TOBE domain CH61_RS11655 PF00005 ABC transporter CH61_RS11660 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS11665 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS11675 PF03009 Glycerophosphoryl diester phosphodiesterase family CH61_RS11690 PF01740 STAS domain CH61_RS11690 PF00916 Sulfate permease family CH61_RS11695 PF00665 Integrase core domain CH61_RS11695 PF02796 Helix-turn-helix domain of resolvase CH61_RS11700 PF01695 IstB-like ATP binding protein CH61_RS11705 PF01740 STAS domain CH61_RS11705 PF00916 Sulfate permease family CH61_RS11710 PF01797 Transposase IS200 like CH61_RS11715 PF00793 DAHP synthetase I family CH61_RS11720 PF13369 Transglutaminase-like superfamily CH61_RS11725 PF04247 Invasion gene expression up-regulator, SirB CH61_RS11730 PF13847 Methyltransferase domain CH61_RS11730 PF17827 PrmC N-terminal domain CH61_RS11735 PF00472 RF-1 domain CH61_RS11735 PF03462 PCRF domain CH61_RS11740 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CH61_RS11740 PF01488 Shikimate / quinate 5-dehydrogenase CH61_RS11740 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CH61_RS11745 PF03550 Outer membrane lipoprotein LolB CH61_RS11750 PF08544 GHMP kinases C terminal CH61_RS11750 PF00288 GHMP kinases N terminal domain CH61_RS11760 PF14572 Phosphoribosyl synthetase-associated domain CH61_RS11760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CH61_RS11770 PF10762 Protein of unknown function (DUF2583) CH61_RS11775 PF01195 Peptidyl-tRNA hydrolase CH61_RS11780 PF06071 Protein of unknown function (DUF933) CH61_RS11780 PF01926 50S ribosome-binding GTPase CH61_RS11825 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CH61_RS11830 PF00486 Transcriptional regulatory protein, C terminal CH61_RS11830 PF00072 Response regulator receiver domain CH61_RS11835 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS11835 PF00672 HAMP domain CH61_RS11835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS11875 PF08242 Methyltransferase domain CH61_RS11900 PF00872 Transposase, Mutator family CH61_RS11945 PF01370 NAD dependent epimerase/dehydratase family CH61_RS11950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH61_RS11950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH61_RS11955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH61_RS11955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH61_RS11965 PF05962 HutD CH61_RS11970 PF01979 Amidohydrolase family CH61_RS11975 PF00392 Bacterial regulatory proteins, gntR family CH61_RS11975 PF07702 UTRA domain CH61_RS11980 PF01979 Amidohydrolase family CH61_RS11990 PF01695 IstB-like ATP binding protein CH61_RS12000 PF02796 Helix-turn-helix domain of resolvase CH61_RS12000 PF00665 Integrase core domain CH61_RS12005 PF00267 Gram-negative porin CH61_RS12010 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CH61_RS12015 PF04996 Succinylarginine dihydrolase CH61_RS12020 PF00171 Aldehyde dehydrogenase family CH61_RS12025 PF04958 Arginine N-succinyltransferase beta subunit CH61_RS12030 PF00202 Aminotransferase class-III CH61_RS12040 PF00155 Aminotransferase class I and II CH61_RS12040 PF00392 Bacterial regulatory proteins, gntR family CH61_RS12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS12045 PF00672 HAMP domain CH61_RS12045 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CH61_RS12045 PF07730 Histidine kinase CH61_RS12050 PF01699 Sodium/calcium exchanger protein CH61_RS12055 PF02562 PhoH-like protein CH61_RS12070 PF13994 PgaD-like protein CH61_RS12075 PF00535 Glycosyl transferase family 2 CH61_RS12080 PF14883 Hypothetical glycosyl hydrolase family 13 CH61_RS12080 PF01522 Polysaccharide deacetylase CH61_RS12090 PF00557 Metallopeptidase family M24 CH61_RS12095 PF03848 Tellurite resistance protein TehB CH61_RS12095 PF09313 Domain of unknown function (DUF1971) CH61_RS12105 PF00578 AhpC/TSA family CH61_RS12110 PF00005 ABC transporter CH61_RS12110 PF02687 FtsX-like permease family CH61_RS12110 PF12704 MacB-like periplasmic core domain CH61_RS12120 PF12704 MacB-like periplasmic core domain CH61_RS12120 PF00005 ABC transporter CH61_RS12120 PF02687 FtsX-like permease family CH61_RS12130 PF10634 Fe2+ transport protein CH61_RS12135 PF03239 Iron permease FTR1 family CH61_RS12145 PF04960 Glutaminase CH61_RS12155 PF00455 DeoR C terminal sensor domain CH61_RS12155 PF08220 DeoR-like helix-turn-helix domain CH61_RS12160 PF00324 Amino acid permease CH61_RS12165 PF00155 Aminotransferase class I and II CH61_RS12170 PF02508 Rnf-Nqr subunit, membrane protein CH61_RS12180 PF04909 Amidohydrolase CH61_RS12185 PF07690 Major Facilitator Superfamily CH61_RS12200 PF03466 LysR substrate binding domain CH61_RS12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS12205 PF03328 HpcH/HpaI aldolase/citrate lyase family CH61_RS12210 PF01575 MaoC like domain CH61_RS12215 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CH61_RS12215 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CH61_RS12220 PF00072 Response regulator receiver domain CH61_RS12220 PF00196 Bacterial regulatory proteins, luxR family CH61_RS12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS12230 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS12230 PF01627 Hpt domain CH61_RS12230 PF00072 Response regulator receiver domain CH61_RS12230 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS12230 PF00989 PAS fold CH61_RS12240 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS12240 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS12245 PF13954 PapC N-terminal domain CH61_RS12245 PF00577 Outer membrane usher protein CH61_RS12245 PF13953 PapC C-terminal domain CH61_RS12255 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS12255 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS12265 PF00589 Phage integrase family CH61_RS12265 PF13356 Arm DNA-binding domain CH61_RS12270 PF00425 chorismate binding enzyme CH61_RS12275 PF07690 Major Facilitator Superfamily CH61_RS12280 PF00664 ABC transporter transmembrane region CH61_RS12280 PF00005 ABC transporter CH61_RS12285 PF00005 ABC transporter CH61_RS12285 PF04954 Siderophore-interacting protein CH61_RS12285 PF00664 ABC transporter transmembrane region CH61_RS12285 PF08021 Siderophore-interacting FAD-binding domain CH61_RS12300 PF00668 Condensation domain CH61_RS12300 PF00550 Phosphopantetheine attachment site CH61_RS12300 PF02801 Beta-ketoacyl synthase, C-terminal domain CH61_RS12300 PF00109 Beta-ketoacyl synthase, N-terminal domain CH61_RS12300 PF00698 Acyl transferase domain CH61_RS12300 PF16197 Ketoacyl-synthetase C-terminal extension CH61_RS12310 PF00975 Thioesterase domain CH61_RS12315 PF00501 AMP-binding enzyme CH61_RS12315 PF13193 AMP-binding enzyme C-terminal domain CH61_RS12320 PF00593 TonB dependent receptor CH61_RS12320 PF07715 TonB-dependent Receptor Plug Domain CH61_RS12360 PF01695 IstB-like ATP binding protein CH61_RS12365 PF00665 Integrase core domain CH61_RS12365 PF02796 Helix-turn-helix domain of resolvase CH61_RS12395 PF00005 ABC transporter CH61_RS12395 PF08402 TOBE domain CH61_RS12400 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS12405 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS12415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH61_RS12415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH61_RS12420 PF00480 ROK family CH61_RS12425 PF00392 Bacterial regulatory proteins, gntR family CH61_RS12425 PF07702 UTRA domain CH61_RS12510 PF05638 Type VI secretion system effector, Hcp CH61_RS12555 PF01066 CDP-alcohol phosphatidyltransferase CH61_RS12560 PF01541 GIY-YIG catalytic domain CH61_RS12560 PF02151 UvrB/uvrC motif CH61_RS12560 PF08459 UvrC Helix-hairpin-helix N-terminal CH61_RS12565 PF00196 Bacterial regulatory proteins, luxR family CH61_RS12565 PF00072 Response regulator receiver domain CH61_RS12570 PF10769 Protein of unknown function (DUF2594) CH61_RS12575 PF06942 GlpM protein CH61_RS12585 PF13505 Outer membrane protein beta-barrel domain CH61_RS12595 PF00324 Amino acid permease CH61_RS12600 PF01344 Kelch motif CH61_RS12605 PF03358 NADPH-dependent FMN reductase CH61_RS12610 PF04261 Dyp-type peroxidase family CH61_RS12615 PF13473 Cupredoxin-like domain CH61_RS12615 PF09375 Imelysin CH61_RS12620 PF03239 Iron permease FTR1 family CH61_RS12625 PF00474 Sodium:solute symporter family CH61_RS12635 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CH61_RS12635 PF01619 Proline dehydrogenase CH61_RS12635 PF00171 Aldehyde dehydrogenase family CH61_RS12635 PF14850 DNA-binding domain of Proline dehydrogenase CH61_RS12650 PF00005 ABC transporter CH61_RS12655 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS12660 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS12665 PF00291 Pyridoxal-phosphate dependent enzyme CH61_RS12670 PF02899 Phage integrase, N-terminal SAM-like domain CH61_RS12675 PF04545 Sigma-70, region 4 CH61_RS12675 PF04539 Sigma-70 region 3 CH61_RS12675 PF04542 Sigma-70 region 2 CH61_RS12680 PF00700 Bacterial flagellin C-terminal helical region CH61_RS12680 PF00669 Bacterial flagellin N-terminal helical region CH61_RS12680 PF08884 Flagellin D3 domain CH61_RS12685 PF02465 Flagellar hook-associated protein 2 N-terminus CH61_RS12685 PF07196 Flagellin hook IN motif CH61_RS12685 PF07195 Flagellar hook-associated protein 2 C-terminus CH61_RS12690 PF02561 Flagellar protein FliS CH61_RS12695 PF05400 Flagellar protein FliT CH61_RS12705 PF12833 Helix-turn-helix domain CH61_RS12710 PF00672 HAMP domain CH61_RS12710 PF02743 Cache domain CH61_RS12710 PF00211 Adenylate and Guanylate cyclase catalytic domain CH61_RS12715 PF01966 HD domain CH61_RS12720 PF00730 HhH-GPD superfamily base excision DNA repair protein CH61_RS12735 PF02049 Flagellar hook-basal body complex protein FliE CH61_RS12740 PF01514 Secretory protein of YscJ/FliF family CH61_RS12740 PF08345 Flagellar M-ring protein C-terminal CH61_RS12745 PF14842 FliG N-terminal domain CH61_RS12745 PF14841 FliG middle domain CH61_RS12745 PF01706 FliG C-terminal domain CH61_RS12750 PF02108 Flagellar assembly protein FliH CH61_RS12755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH61_RS12755 PF18269 T3SS EscN ATPase C-terminal domain CH61_RS12760 PF02050 Flagellar FliJ protein CH61_RS12765 PF02120 Flagellar hook-length control protein FliK CH61_RS12770 PF03748 Flagellar basal body-associated protein FliL CH61_RS12775 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH61_RS12775 PF02154 Flagellar motor switch protein FliM CH61_RS12780 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH61_RS12780 PF16973 Flagellar motor switch protein FliN N-terminal CH61_RS12785 PF04347 Flagellar biosynthesis protein, FliO CH61_RS12790 PF00813 FliP family CH61_RS12795 PF01313 Bacterial export proteins, family 3 CH61_RS12800 PF01311 Bacterial export proteins, family 1 CH61_RS12815 PF00294 pfkB family carbohydrate kinase CH61_RS12820 PF02653 Branched-chain amino acid transport system / permease component CH61_RS12825 PF00005 ABC transporter CH61_RS12830 PF13407 Periplasmic binding protein domain CH61_RS12835 PF02653 Branched-chain amino acid transport system / permease component CH61_RS12840 PF00596 Class II Aldolase and Adducin N-terminal domain CH61_RS12845 PF04198 Putative sugar-binding domain CH61_RS12850 PF00669 Bacterial flagellin N-terminal helical region CH61_RS12855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH61_RS12855 PF00460 Flagella basal body rod protein CH61_RS12860 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CH61_RS12860 PF10135 Rod binding protein CH61_RS12865 PF02119 Flagellar P-ring protein CH61_RS12870 PF02107 Flagellar L-ring protein CH61_RS12880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH61_RS12880 PF00460 Flagella basal body rod protein CH61_RS12885 PF07559 Flagellar basal body protein FlaE CH61_RS12885 PF00460 Flagella basal body rod protein CH61_RS12885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH61_RS12890 PF03963 Flagellar hook capping protein - N-terminal region CH61_RS12890 PF13860 FlgD Ig-like domain CH61_RS12890 PF13861 FlgD Tudor-like domain CH61_RS12895 PF00460 Flagella basal body rod protein CH61_RS12895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH61_RS12900 PF00460 Flagella basal body rod protein CH61_RS12905 PF17656 FlgA N-terminal domain CH61_RS12905 PF13144 Chaperone for flagella basal body P-ring formation CH61_RS12910 PF04316 Anti-sigma-28 factor, FlgM CH61_RS12915 PF05130 FlgN protein CH61_RS12920 PF09134 Invasin, domain 3 CH61_RS12920 PF11924 Inverse autotransporter, beta-domain CH61_RS12920 PF02369 Bacterial Ig-like domain (group 1) CH61_RS12920 PF07979 Intimin C-type lectin domain CH61_RS12925 PF01797 Transposase IS200 like CH61_RS12930 PF09134 Invasin, domain 3 CH61_RS12930 PF07979 Intimin C-type lectin domain CH61_RS12930 PF11924 Inverse autotransporter, beta-domain CH61_RS12930 PF02369 Bacterial Ig-like domain (group 1) CH61_RS12935 PF06366 Flagellar protein FlhE CH61_RS12940 PF00771 FHIPEP family CH61_RS12945 PF01312 FlhB HrpN YscU SpaS Family CH61_RS12965 PF10709 Protein of unknown function (DUF2511) CH61_RS12975 PF04234 CopC domain CH61_RS12980 PF00210 Ferritin-like domain CH61_RS12985 PF06440 DNA polymerase III, theta subunit CH61_RS12990 PF00561 alpha/beta hydrolase fold CH61_RS12995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CH61_RS12995 PF00326 Prolyl oligopeptidase family CH61_RS13000 PF13995 YebF-like protein CH61_RS13005 PF04266 ASCH domain CH61_RS13010 PF07130 YebG protein CH61_RS13015 PF00270 DEAD/DEAH box helicase CH61_RS13015 PF03880 DbpA RNA binding domain CH61_RS13015 PF00271 Helicase conserved C-terminal domain CH61_RS13020 PF02222 ATP-grasp domain CH61_RS13025 PF03701 Uncharacterised protein family (UPF0181) CH61_RS13030 PF00425 chorismate binding enzyme CH61_RS13030 PF04715 Anthranilate synthase component I, N terminal region CH61_RS13035 PF00293 NUDIX domain CH61_RS13040 PF03313 Serine dehydratase alpha chain CH61_RS13040 PF03315 Serine dehydratase beta chain CH61_RS13045 PF01613 Flavin reductase like domain CH61_RS13050 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CH61_RS13050 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CH61_RS13055 PF07690 Major Facilitator Superfamily CH61_RS13060 PF03328 HpcH/HpaI aldolase/citrate lyase family CH61_RS13065 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH61_RS13070 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CH61_RS13075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CH61_RS13080 PF00171 Aldehyde dehydrogenase family CH61_RS13085 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH61_RS13090 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH61_RS13095 PF01047 MarR family CH61_RS13100 PF03741 Integral membrane protein TerC family CH61_RS13100 PF03471 Transporter associated domain CH61_RS13105 PF03610 PTS system fructose IIA component CH61_RS13105 PF03830 PTS system sorbose subfamily IIB component CH61_RS13110 PF03609 PTS system sorbose-specific iic component CH61_RS13115 PF03613 PTS system mannose/fructose/sorbose family IID component CH61_RS13120 PF06173 Protein of unknown function (DUF986) CH61_RS13125 PF02659 Putative manganese efflux pump CH61_RS13130 PF07715 TonB-dependent Receptor Plug Domain CH61_RS13130 PF00593 TonB dependent receptor CH61_RS13135 PF00563 EAL domain CH61_RS13135 PF00990 Diguanylate cyclase, GGDEF domain CH61_RS13135 PF05231 MASE1 CH61_RS13135 PF08447 PAS fold CH61_RS13135 PF08448 PAS fold CH61_RS13135 PF13426 PAS domain CH61_RS13145 PF13847 Methyltransferase domain CH61_RS13150 PF02578 Multi-copper polyphenol oxidoreductase laccase CH61_RS13155 PF00313 'Cold-shock' DNA-binding domain CH61_RS13160 PF10736 Protein of unknown function (DUF2627) CH61_RS13170 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CH61_RS13175 PF00324 Amino acid permease CH61_RS13190 PF13974 YebO-like protein CH61_RS13195 PF13996 YobH-like protein CH61_RS13200 PF10964 Protein of unknown function (DUF2766) CH61_RS13210 PF12833 Helix-turn-helix domain CH61_RS13220 PF00005 ABC transporter CH61_RS13220 PF00664 ABC transporter transmembrane region CH61_RS13235 PF06167 Glucose-regulated metallo-peptidase M90 CH61_RS13245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH61_RS13245 PF00356 Bacterial regulatory proteins, lacI family CH61_RS13250 PF01695 IstB-like ATP binding protein CH61_RS13255 PF00665 Integrase core domain CH61_RS13255 PF02796 Helix-turn-helix domain of resolvase CH61_RS13260 PF00665 Integrase core domain CH61_RS13260 PF02796 Helix-turn-helix domain of resolvase CH61_RS13265 PF00356 Bacterial regulatory proteins, lacI family CH61_RS13265 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH61_RS13270 PF00872 Transposase, Mutator family CH61_RS13275 PF07883 Cupin domain CH61_RS13280 PF04962 KduI/IolB family CH61_RS13290 PF06917 Periplasmic pectate lyase CH61_RS13295 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS13300 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS13305 PF03459 TOBE domain CH61_RS13305 PF17912 MalK OB fold domain CH61_RS13305 PF00005 ABC transporter CH61_RS13310 PF01547 Bacterial extracellular solute-binding protein CH61_RS13315 PF06178 Oligogalacturonate-specific porin protein (KdgM) CH61_RS13320 PF04307 LexA-binding, inner membrane-associated putative hydrolase CH61_RS13325 PF00375 Sodium:dicarboxylate symporter family CH61_RS13330 PF01510 N-acetylmuramoyl-L-alanine amidase CH61_RS13335 PF09339 IclR helix-turn-helix domain CH61_RS13335 PF01614 Bacterial transcriptional regulator CH61_RS13340 PF14583 Oligogalacturonate lyase CH61_RS13345 PF07690 Major Facilitator Superfamily CH61_RS13350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS13350 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS13360 PF13953 PapC C-terminal domain CH61_RS13360 PF00577 Outer membrane usher protein CH61_RS13360 PF13954 PapC N-terminal domain CH61_RS13365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS13365 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS13370 PF00419 Fimbrial protein CH61_RS13375 PF01435 Peptidase family M48 CH61_RS13380 PF11818 C-terminal domain of tail specific protease (DUF3340) CH61_RS13380 PF17804 Tail specific protease N-terminal domain CH61_RS13380 PF03572 Peptidase family S41 CH61_RS13380 PF00595 PDZ domain CH61_RS13385 PF04352 ProQ/FINO family CH61_RS13385 PF17516 ProQ C-terminal domain CH61_RS13390 PF13185 GAF domain CH61_RS13395 PF04403 Paraquat-inducible protein A CH61_RS13400 PF02470 MlaD protein CH61_RS13420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS13420 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS13435 PF07351 Protein of unknown function (DUF1480) CH61_RS13445 PF00665 Integrase core domain CH61_RS13445 PF02796 Helix-turn-helix domain of resolvase CH61_RS13450 PF01695 IstB-like ATP binding protein CH61_RS13475 PF00842 Alanine racemase, C-terminal domain CH61_RS13475 PF01168 Alanine racemase, N-terminal domain CH61_RS13485 PF05662 Coiled stalk of trimeric autotransporter adhesin CH61_RS13485 PF03895 YadA-like membrane anchor domain CH61_RS13485 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS13485 PF05658 Head domain of trimeric autotransporter adhesin CH61_RS13490 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS13490 PF03895 YadA-like membrane anchor domain CH61_RS13490 PF05658 Head domain of trimeric autotransporter adhesin CH61_RS13490 PF05662 Coiled stalk of trimeric autotransporter adhesin CH61_RS13495 PF01510 N-acetylmuramoyl-L-alanine amidase CH61_RS13505 PF04344 Chemotaxis phosphatase, CheZ CH61_RS13510 PF00072 Response regulator receiver domain CH61_RS13515 PF01339 CheB methylesterase CH61_RS13515 PF00072 Response regulator receiver domain CH61_RS13520 PF03705 CheR methyltransferase, all-alpha domain CH61_RS13520 PF01739 CheR methyltransferase, SAM binding domain CH61_RS13525 PF02203 Tar ligand binding domain homologue CH61_RS13525 PF00672 HAMP domain CH61_RS13525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH61_RS13530 PF00672 HAMP domain CH61_RS13530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH61_RS13530 PF02203 Tar ligand binding domain homologue CH61_RS13535 PF02203 Tar ligand binding domain homologue CH61_RS13535 PF00672 HAMP domain CH61_RS13535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH61_RS13550 PF12951 Passenger-associated-transport-repeat CH61_RS13555 PF08348 YheO-like PAS domain CH61_RS13555 PF13309 HTH domain CH61_RS13565 PF01042 Endoribonuclease L-PSP CH61_RS13570 PF07690 Major Facilitator Superfamily CH61_RS13575 PF01584 CheW-like domain CH61_RS13580 PF01584 CheW-like domain CH61_RS13580 PF01627 Hpt domain CH61_RS13580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS13580 PF02895 Signal transducing histidine kinase, homodimeric domain CH61_RS13580 PF09078 CheY binding CH61_RS13585 PF00691 OmpA family CH61_RS13585 PF13677 Membrane MotB of proton-channel complex MotA/MotB CH61_RS13590 PF01618 MotA/TolQ/ExbB proton channel family CH61_RS13595 PF05280 Flagellar transcriptional activator (FlhC) CH61_RS13605 PF00690 Cation transporter/ATPase, N-terminus CH61_RS13605 PF00689 Cation transporting ATPase, C-terminus CH61_RS13610 PF02308 MgtC family CH61_RS13625 PF10781 Dextransucrase DSRB CH61_RS13630 PF00313 'Cold-shock' DNA-binding domain CH61_RS13635 PF16353 Domain of unknown function(DUF4981) CH61_RS13635 PF00703 Glycosyl hydrolases family 2 CH61_RS13635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CH61_RS13635 PF02837 Glycosyl hydrolases family 2, sugar binding domain CH61_RS13635 PF02929 Beta galactosidase small chain CH61_RS13640 PF14765 Polyketide synthase dehydratase CH61_RS13640 PF02801 Beta-ketoacyl synthase, C-terminal domain CH61_RS13640 PF00109 Beta-ketoacyl synthase, N-terminal domain CH61_RS13640 PF16197 Ketoacyl-synthetase C-terminal extension CH61_RS13640 PF08659 KR domain CH61_RS13640 PF00107 Zinc-binding dehydrogenase CH61_RS13640 PF08240 Alcohol dehydrogenase GroES-like domain CH61_RS13640 PF00698 Acyl transferase domain CH61_RS13640 PF00550 Phosphopantetheine attachment site CH61_RS13645 PF10777 Inner membrane protein YlaC CH61_RS13650 PF13404 AsnC-type helix-turn-helix domain CH61_RS13650 PF01037 Lrp/AsnC ligand binding domain CH61_RS13660 PF14001 YdfZ protein CH61_RS13665 PF00328 Histidine phosphatase superfamily (branch 2) CH61_RS13675 PF01638 HxlR-like helix-turn-helix CH61_RS13680 PF05368 NmrA-like family CH61_RS13685 PF08447 PAS fold CH61_RS13685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH61_RS13695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH61_RS13695 PF00356 Bacterial regulatory proteins, lacI family CH61_RS13700 PF00180 Isocitrate/isopropylmalate dehydrogenase CH61_RS13705 PF00849 RNA pseudouridylate synthase CH61_RS13710 PF00293 NUDIX domain CH61_RS13720 PF04356 Protein of unknown function (DUF489) CH61_RS13725 PF08328 Adenylosuccinate lyase C-terminal CH61_RS13725 PF00206 Lyase CH61_RS13735 PF00486 Transcriptional regulatory protein, C terminal CH61_RS13735 PF00072 Response regulator receiver domain CH61_RS13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS13740 PF08918 PhoQ Sensor CH61_RS13745 PF08007 Cupin superfamily protein CH61_RS13750 PF07687 Peptidase dimerisation domain CH61_RS13750 PF01546 Peptidase family M20/M25/M40 CH61_RS13755 PF02146 Sir2 family CH61_RS13760 PF00480 ROK family CH61_RS13765 PF12704 MacB-like periplasmic core domain CH61_RS13765 PF02687 FtsX-like permease family CH61_RS13770 PF00005 ABC transporter CH61_RS13775 PF12704 MacB-like periplasmic core domain CH61_RS13775 PF02687 FtsX-like permease family CH61_RS13780 PF02559 CarD-like/TRCF domain CH61_RS13780 PF00270 DEAD/DEAH box helicase CH61_RS13780 PF00271 Helicase conserved C-terminal domain CH61_RS13780 PF03461 TRCF domain CH61_RS13780 PF17757 UvrB interaction domain CH61_RS13785 PF05433 Glycine zipper 2TM domain CH61_RS13790 PF02796 Helix-turn-helix domain of resolvase CH61_RS13790 PF00665 Integrase core domain CH61_RS13795 PF01695 IstB-like ATP binding protein CH61_RS13800 PF00872 Transposase, Mutator family CH61_RS13815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS13820 PF05728 Uncharacterised protein family (UPF0227) CH61_RS13825 PF00933 Glycosyl hydrolase family 3 N terminal domain CH61_RS13830 PF01636 Phosphotransferase enzyme family CH61_RS13835 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH61_RS13835 PF13036 Peptidoglycan-synthase activator LpoB CH61_RS13840 PF07233 Protein of unknown function (DUF1425) CH61_RS13845 PF01230 HIT domain CH61_RS13850 PF08501 Shikimate dehydrogenase substrate binding domain CH61_RS13855 PF01797 Transposase IS200 like CH61_RS13860 PF00367 phosphotransferase system, EIIB CH61_RS13860 PF02378 Phosphotransferase system, EIIC CH61_RS13865 PF01026 TatD related DNase CH61_RS13870 PF09115 DNA polymerase III, delta subunit, C terminal CH61_RS13875 PF02223 Thymidylate kinase CH61_RS13880 PF02618 YceG-like family CH61_RS13885 PF01063 Amino-transferase class IV CH61_RS13890 PF01797 Transposase IS200 like CH61_RS13895 PF02801 Beta-ketoacyl synthase, C-terminal domain CH61_RS13895 PF00109 Beta-ketoacyl synthase, N-terminal domain CH61_RS13900 PF00550 Phosphopantetheine attachment site CH61_RS13910 PF00698 Acyl transferase domain CH61_RS13915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH61_RS13915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH61_RS13920 PF02504 Fatty acid synthesis protein CH61_RS13925 PF01783 Ribosomal L32p protein family CH61_RS13930 PF02620 Large ribosomal RNA subunit accumulation protein YceD CH61_RS13935 PF02545 Maf-like protein CH61_RS13940 PF01797 Transposase IS200 like CH61_RS13950 PF00849 RNA pseudouridylate synthase CH61_RS13950 PF01479 S4 domain CH61_RS13955 PF10150 Ribonuclease E/G family CH61_RS13955 PF00575 S1 RNA binding domain CH61_RS13955 PF12111 Polyribonucleotide phosphorylase C terminal CH61_RS13960 PF00872 Transposase, Mutator family CH61_RS13965 PF03992 Antibiotic biosynthesis monooxygenase CH61_RS13970 PF01979 Amidohydrolase family CH61_RS13975 PF06183 DinI-like family CH61_RS13985 PF13991 BssS protein family CH61_RS13995 PF01306 LacY proton/sugar symporter CH61_RS14000 PF16875 Glycosyl hydrolase family 36 N-terminal domain CH61_RS14000 PF16874 Glycosyl hydrolase family 36 C-terminal domain CH61_RS14010 PF01648 4'-phosphopantetheinyl transferase superfamily CH61_RS14010 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CH61_RS14015 PF03480 Bacterial extracellular solute-binding protein, family 7 CH61_RS14025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CH61_RS14030 PF00196 Bacterial regulatory proteins, luxR family CH61_RS14030 PF00072 Response regulator receiver domain CH61_RS14040 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CH61_RS14050 PF01522 Polysaccharide deacetylase CH61_RS14060 PF01554 MatE CH61_RS14065 PF00764 Arginosuccinate synthase CH61_RS14070 PF01070 FMN-dependent dehydrogenase CH61_RS14075 PF13378 Enolase C-terminal domain-like CH61_RS14075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH61_RS14080 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH61_RS14090 PF04134 Protein of unknown function, DUF393 CH61_RS14095 PF07690 Major Facilitator Superfamily CH61_RS14100 PF11924 Inverse autotransporter, beta-domain CH61_RS14100 PF02369 Bacterial Ig-like domain (group 1) CH61_RS14100 PF09134 Invasin, domain 3 CH61_RS14105 PF00872 Transposase, Mutator family CH61_RS14110 PF04363 Protein of unknown function (DUF496) CH61_RS14120 PF00929 Exonuclease CH61_RS14120 PF08411 Exonuclease C-terminal CH61_RS14125 PF13520 Amino acid permease CH61_RS14135 PF00465 Iron-containing alcohol dehydrogenase CH61_RS14140 PF00005 ABC transporter CH61_RS14145 PF00005 ABC transporter CH61_RS14150 PF02653 Branched-chain amino acid transport system / permease component CH61_RS14160 PF01370 NAD dependent epimerase/dehydratase family CH61_RS14165 PF08029 HisG, C-terminal domain CH61_RS14165 PF01634 ATP phosphoribosyltransferase CH61_RS14170 PF00815 Histidinol dehydrogenase CH61_RS14175 PF00155 Aminotransferase class I and II CH61_RS14180 PF00475 Imidazoleglycerol-phosphate dehydratase CH61_RS14185 PF00117 Glutamine amidotransferase class-I CH61_RS14190 PF00977 Histidine biosynthesis protein CH61_RS14195 PF00977 Histidine biosynthesis protein CH61_RS14200 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CH61_RS14200 PF01502 Phosphoribosyl-AMP cyclohydrolase CH61_RS14205 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CH61_RS14205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH61_RS14210 PF00483 Nucleotidyl transferase CH61_RS14215 PF00483 Nucleotidyl transferase CH61_RS14220 PF06276 Ferric iron reductase FhuF-like transporter CH61_RS14220 PF04183 IucA / IucC family CH61_RS14225 PF00593 TonB dependent receptor CH61_RS14225 PF07715 TonB-dependent Receptor Plug Domain CH61_RS14225 PF07660 Secretin and TonB N terminus short domain CH61_RS14230 PF01497 Periplasmic binding protein CH61_RS14235 PF01032 FecCD transport family CH61_RS14240 PF01032 FecCD transport family CH61_RS14245 PF00005 ABC transporter CH61_RS14250 PF06276 Ferric iron reductase FhuF-like transporter CH61_RS14250 PF04183 IucA / IucC family CH61_RS14260 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CH61_RS14265 PF00282 Pyridoxal-dependent decarboxylase conserved domain CH61_RS14270 PF11575 FhuF 2Fe-2S C-terminal domain CH61_RS14270 PF06276 Ferric iron reductase FhuF-like transporter CH61_RS14275 PF03471 Transporter associated domain CH61_RS14275 PF00571 CBS domain CH61_RS14275 PF03741 Integral membrane protein TerC family CH61_RS14280 PF05170 AsmA family CH61_RS14285 PF00692 dUTPase CH61_RS14290 PF00485 Phosphoribulokinase / Uridine kinase family CH61_RS14295 PF10609 NUBPL iron-transfer P-loop NTPase CH61_RS14300 PF01588 Putative tRNA binding domain CH61_RS14300 PF09334 tRNA synthetases class I (M) CH61_RS14305 PF01797 Transposase IS200 like CH61_RS14310 PF00665 Integrase core domain CH61_RS14310 PF02796 Helix-turn-helix domain of resolvase CH61_RS14315 PF01695 IstB-like ATP binding protein CH61_RS14320 PF01367 5'-3' exonuclease, C-terminal SAM fold CH61_RS14320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH61_RS14340 PF07690 Major Facilitator Superfamily CH61_RS14345 PF03788 LrgA family CH61_RS14350 PF04172 LrgB-like family CH61_RS14355 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CH61_RS14355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH61_RS14360 PF03949 Malic enzyme, NAD binding domain CH61_RS14360 PF00390 Malic enzyme, N-terminal domain CH61_RS14365 PF02698 DUF218 domain CH61_RS14370 PF02653 Branched-chain amino acid transport system / permease component CH61_RS14375 PF00005 ABC transporter CH61_RS14380 PF13407 Periplasmic binding protein domain CH61_RS14385 PF04235 Protein of unknown function (DUF418) CH61_RS14390 PF01227 GTP cyclohydrolase I CH61_RS14395 PF06779 Uncharacterised MFS-type transporter YbfB CH61_RS14400 PF03466 LysR substrate binding domain CH61_RS14400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS14405 PF08240 Alcohol dehydrogenase GroES-like domain CH61_RS14405 PF00107 Zinc-binding dehydrogenase CH61_RS14410 PF00756 Putative esterase CH61_RS14430 PF13533 Biotin-lipoyl like CH61_RS14435 PF00005 ABC transporter CH61_RS14445 PF03454 MoeA C-terminal region (domain IV) CH61_RS14445 PF03453 MoeA N-terminal region (domain I and II) CH61_RS14445 PF00994 Probable molybdopterin binding domain CH61_RS14450 PF00899 ThiF family CH61_RS14455 PF00872 Transposase, Mutator family CH61_RS14465 PF00005 ABC transporter CH61_RS14465 PF12848 ABC transporter CH61_RS14525 PF13358 DDE superfamily endonuclease CH61_RS14525 PF13592 Winged helix-turn helix CH61_RS14555 PF13296 Putative type VI secretion system Rhs element Vgr CH61_RS14555 PF04717 Type VI secretion system, phage-baseplate injector CH61_RS14555 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CH61_RS14560 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS14560 PF07724 AAA domain (Cdc48 subfamily) CH61_RS14560 PF10431 C-terminal, D2-small domain, of ClpB protein CH61_RS14560 PF17871 AAA lid domain CH61_RS14570 PF00691 OmpA family CH61_RS14570 PF05736 OprF membrane domain CH61_RS14585 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH61_RS14600 PF00698 Acyl transferase domain CH61_RS14605 PF00550 Phosphopantetheine attachment site CH61_RS14620 PF00378 Enoyl-CoA hydratase/isomerase CH61_RS14630 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CH61_RS14630 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CH61_RS14640 PF00109 Beta-ketoacyl synthase, N-terminal domain CH61_RS14640 PF02801 Beta-ketoacyl synthase, C-terminal domain CH61_RS14645 PF07977 FabA-like domain CH61_RS14660 PF01565 FAD binding domain CH61_RS14660 PF08031 Berberine and berberine like CH61_RS14680 PF13610 DDE domain CH61_RS14690 PF04358 DsrC like protein CH61_RS14695 PF00708 Acylphosphatase CH61_RS14700 PF10672 S-adenosylmethionine-dependent methyltransferase CH61_RS14700 PF17785 PUA-like domain CH61_RS14705 PF08755 Hemimethylated DNA-binding protein YccV like CH61_RS14710 PF13380 CoA binding domain CH61_RS14715 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CH61_RS14720 PF02142 MGS-like domain CH61_RS14725 PF13361 UvrD-like helicase C-terminal domain CH61_RS14725 PF00580 UvrD/REP helicase N-terminal domain CH61_RS14725 PF12462 DNA helicase IV / RNA helicase N terminal CH61_RS14730 PF03733 Inner membrane component domain CH61_RS14735 PF12805 FUSC-like inner membrane protein yccS CH61_RS14740 PF04994 TfoX C-terminal domain CH61_RS14740 PF04993 TfoX N-terminal domain CH61_RS14745 PF03846 Cell division inhibitor SulA CH61_RS14750 PF00691 OmpA family CH61_RS14750 PF01389 OmpA-like transmembrane domain CH61_RS14760 PF01797 Transposase IS200 like CH61_RS14765 PF17414 MatP C-terminal ribbon-helix-helix domain CH61_RS14765 PF06303 MatP N-terminal domain CH61_RS14770 PF05362 Lon protease (S16) C-terminal proteolytic domain CH61_RS14770 PF13654 AAA domain CH61_RS14775 PF07977 FabA-like domain CH61_RS14785 PF00109 Beta-ketoacyl synthase, N-terminal domain CH61_RS14785 PF02801 Beta-ketoacyl synthase, C-terminal domain CH61_RS14800 PF01695 IstB-like ATP binding protein CH61_RS14805 PF00109 Beta-ketoacyl synthase, N-terminal domain CH61_RS14805 PF02801 Beta-ketoacyl synthase, C-terminal domain CH61_RS14810 PF01797 Transposase IS200 like CH61_RS14820 PF04957 Ribosome modulation factor CH61_RS14830 PF03886 ABC-type transport auxiliary lipoprotein component CH61_RS14835 PF02470 MlaD protein CH61_RS14840 PF04403 Paraquat-inducible protein A CH61_RS14845 PF00005 ABC transporter CH61_RS14845 PF12848 ABC transporter CH61_RS14845 PF16326 ABC transporter C-terminal domain CH61_RS14850 PF02926 THUMP domain CH61_RS14850 PF10672 S-adenosylmethionine-dependent methyltransferase CH61_RS14850 PF01170 Putative RNA methylase family UPF0020 CH61_RS14855 PF00111 2Fe-2S iron-sulfur cluster binding domain CH61_RS14855 PF03476 MOSC N-terminal beta barrel domain CH61_RS14855 PF03473 MOSC domain CH61_RS14860 PF07126 Cell-division protein ZapC CH61_RS14865 PF01180 Dihydroorotate dehydrogenase CH61_RS14870 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CH61_RS14870 PF11940 Domain of unknown function (DUF3458) Ig-like fold CH61_RS14870 PF01433 Peptidase family M1 domain CH61_RS14875 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CH61_RS14875 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CH61_RS14880 PF00152 tRNA synthetases class II (D, K and N) CH61_RS14880 PF01336 OB-fold nucleic acid binding domain CH61_RS14885 PF00267 Gram-negative porin CH61_RS14890 PF01797 Transposase IS200 like CH61_RS14895 PF00155 Aminotransferase class I and II CH61_RS14900 PF00753 Metallo-beta-lactamase superfamily CH61_RS14905 PF05951 Bacterial protein of unknown function (DUF882) CH61_RS14910 PF03734 L,D-transpeptidase catalytic domain CH61_RS14910 PF01471 Putative peptidoglycan binding domain CH61_RS14915 PF01797 Transposase IS200 like CH61_RS14925 PF16330 MukB hinge domain CH61_RS14925 PF04310 MukB N-terminal CH61_RS14930 PF04288 MukE-like family CH61_RS14935 PF17192 MukF middle domain CH61_RS14935 PF17193 MukF C-terminal domain CH61_RS14935 PF03882 MukF winged-helix domain CH61_RS14940 PF13847 Methyltransferase domain CH61_RS14950 PF01636 Phosphotransferase enzyme family CH61_RS14955 PF02348 Cytidylyltransferase CH61_RS14960 PF03966 Trm112p-like protein CH61_RS14965 PF00313 'Cold-shock' DNA-binding domain CH61_RS14975 PF07063 Domain of unknown function (DUF1338) CH61_RS14980 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CH61_RS14985 PF00664 ABC transporter transmembrane region CH61_RS14985 PF00005 ABC transporter CH61_RS14990 PF03772 Competence protein CH61_RS14990 PF00753 Metallo-beta-lactamase superfamily CH61_RS14995 PF00216 Bacterial DNA-binding protein CH61_RS15000 PF00575 S1 RNA binding domain CH61_RS15005 PF02224 Cytidylate kinase CH61_RS15010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH61_RS15015 PF00266 Aminotransferase class-V CH61_RS15025 PF05662 Coiled stalk of trimeric autotransporter adhesin CH61_RS15025 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS15025 PF03895 YadA-like membrane anchor domain CH61_RS15025 PF05662 Coiled stalk of trimeric autotransporter adhesin CH61_RS15025 PF05658 Head domain of trimeric autotransporter adhesin CH61_RS15025 PF03895 YadA-like membrane anchor domain CH61_RS15025 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS15025 PF05658 Head domain of trimeric autotransporter adhesin CH61_RS15030 PF00710 Asparaginase, N-terminal CH61_RS15030 PF17763 Glutaminase/Asparaginase C-terminal domain CH61_RS15035 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CH61_RS15035 PF18381 YcaO cyclodehydratase C-terminal domain CH61_RS15040 PF01226 Formate/nitrite transporter CH61_RS15045 PF02901 Pyruvate formate lyase-like CH61_RS15045 PF01228 Glycine radical CH61_RS15055 PF04055 Radical SAM superfamily CH61_RS15060 PF07690 Major Facilitator Superfamily CH61_RS15065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH61_RS15065 PF02403 Seryl-tRNA synthetase N-terminal domain CH61_RS15070 PF12002 MgsA AAA+ ATPase C terminal CH61_RS15070 PF16193 AAA C-terminal domain CH61_RS15070 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS15075 PF03548 Outer membrane lipoprotein carrier protein LolA CH61_RS15080 PF17854 FtsK alpha domain CH61_RS15080 PF01580 FtsK/SpoIIIE family CH61_RS15080 PF09397 Ftsk gamma domain CH61_RS15080 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CH61_RS15085 PF01037 Lrp/AsnC ligand binding domain CH61_RS15090 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS15100 PF00664 ABC transporter transmembrane region CH61_RS15100 PF00005 ABC transporter CH61_RS15105 PF00664 ABC transporter transmembrane region CH61_RS15105 PF00005 ABC transporter CH61_RS15110 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CH61_RS15115 PF01176 Translation initiation factor 1A / IF-1 CH61_RS15120 PF01797 Transposase IS200 like CH61_RS15125 PF17871 AAA lid domain CH61_RS15125 PF10431 C-terminal, D2-small domain, of ClpB protein CH61_RS15125 PF07724 AAA domain (Cdc48 subfamily) CH61_RS15125 PF02861 Clp amino terminal domain, pathogenicity island component CH61_RS15125 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS15130 PF02617 ATP-dependent Clp protease adaptor protein ClpS CH61_RS15135 PF00313 'Cold-shock' DNA-binding domain CH61_RS15140 PF00005 ABC transporter CH61_RS15140 PF02687 FtsX-like permease family CH61_RS15140 PF12704 MacB-like periplasmic core domain CH61_RS15145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH61_RS15150 PF04393 Protein of unknown function (DUF535) CH61_RS15155 PF11398 Protein of unknown function (DUF2813) CH61_RS15160 PF03956 Lysine exporter LysO CH61_RS15165 PF03063 Prismane/CO dehydrogenase family CH61_RS15170 PF00175 Oxidoreductase NAD-binding domain CH61_RS15170 PF00970 Oxidoreductase FAD-binding domain CH61_RS15170 PF00111 2Fe-2S iron-sulfur cluster binding domain CH61_RS15175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH61_RS15175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH61_RS15175 PF00205 Thiamine pyrophosphate enzyme, central domain CH61_RS15180 PF01212 Beta-eliminating lyase CH61_RS15185 PF11066 Protein of unknown function (DUF2867) CH61_RS15185 PF13460 NAD(P)H-binding CH61_RS15190 PF01370 NAD dependent epimerase/dehydratase family CH61_RS15195 PF12883 Protein of unknown function (DUF3828) CH61_RS15200 PF01817 Chorismate mutase type II CH61_RS15205 PF00005 ABC transporter CH61_RS15210 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS15215 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS15220 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS15230 PF00892 EamA-like transporter family CH61_RS15235 PF10100 Staphylopine dehydrogenase CH61_RS15240 PF03059 Nicotianamine synthase protein CH61_RS15245 PF00005 ABC transporter CH61_RS15275 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS15280 PF01695 IstB-like ATP binding protein CH61_RS15285 PF02796 Helix-turn-helix domain of resolvase CH61_RS15285 PF00665 Integrase core domain CH61_RS15290 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS15295 PF05958 tRNA (Uracil-5-)-methyltransferase CH61_RS15300 PF10767 Protein of unknown function (DUF2593) CH61_RS15305 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS15310 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS15315 PF00005 ABC transporter CH61_RS15315 PF08402 TOBE domain CH61_RS15320 PF13416 Bacterial extracellular solute-binding protein CH61_RS15325 PF10722 Putative bacterial sensory transduction regulator CH61_RS15335 PF07214 Protein of unknown function (DUF1418) CH61_RS15340 PF00462 Glutaredoxin CH61_RS15345 PF02080 TrkA-C domain CH61_RS15345 PF06826 Predicted Permease Membrane Region CH61_RS15355 PF01569 PAP2 superfamily CH61_RS15360 PF01791 DeoC/LacD family aldolase CH61_RS15365 PF08220 DeoR-like helix-turn-helix domain CH61_RS15365 PF00455 DeoR C terminal sensor domain CH61_RS15380 PF07943 Penicillin-binding protein 5, C-terminal domain CH61_RS15380 PF00768 D-alanyl-D-alanine carboxypeptidase CH61_RS15385 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS15390 PF09383 NIL domain CH61_RS15390 PF00005 ABC transporter CH61_RS15395 PF03180 NLPA lipoprotein CH61_RS15410 PF13417 Glutathione S-transferase, N-terminal domain CH61_RS15410 PF00043 Glutathione S-transferase, C-terminal domain CH61_RS15415 PF00593 TonB dependent receptor CH61_RS15415 PF07715 TonB-dependent Receptor Plug Domain CH61_RS15420 PF00005 ABC transporter CH61_RS15425 PF01032 FecCD transport family CH61_RS15435 PF00324 Amino acid permease CH61_RS15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS15440 PF03466 LysR substrate binding domain CH61_RS15445 PF03601 Conserved hypothetical protein 698 CH61_RS15450 PF01261 Xylose isomerase-like TIM barrel CH61_RS15455 PF00577 Outer membrane usher protein CH61_RS15455 PF13953 PapC C-terminal domain CH61_RS15455 PF13954 PapC N-terminal domain CH61_RS15460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS15460 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS15470 PF17550 Family of unknown function CH61_RS15475 PF00486 Transcriptional regulatory protein, C terminal CH61_RS15480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH61_RS15480 PF02378 Phosphotransferase system, EIIC CH61_RS15485 PF00294 pfkB family carbohydrate kinase CH61_RS15490 PF00381 PTS HPr component phosphorylation site CH61_RS15490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH61_RS15495 PF00293 NUDIX domain CH61_RS15500 PF02653 Branched-chain amino acid transport system / permease component CH61_RS15505 PF00005 ABC transporter CH61_RS15515 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CH61_RS15520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH61_RS15520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS15525 PF00171 Aldehyde dehydrogenase family CH61_RS15535 PF01842 ACT domain CH61_RS15535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH61_RS15535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH61_RS15545 PF03692 Putative zinc- or iron-chelating domain CH61_RS15550 PF03222 Tryptophan/tyrosine permease family CH61_RS15555 PF09285 Elongation factor P, C-terminal CH61_RS15555 PF01132 Elongation factor P (EF-P) OB domain CH61_RS15555 PF08207 Elongation factor P (EF-P) KOW-like domain CH61_RS15560 PF03786 D-mannonate dehydratase (UxuA) CH61_RS15565 PF01232 Mannitol dehydrogenase Rossmann domain CH61_RS15565 PF08125 Mannitol dehydrogenase C-terminal domain CH61_RS15570 PF00392 Bacterial regulatory proteins, gntR family CH61_RS15570 PF07729 FCD domain CH61_RS15580 PF07683 Cobalamin synthesis protein cobW C-terminal domain CH61_RS15580 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH61_RS15585 PF01569 PAP2 superfamily CH61_RS15590 PF00877 NlpC/P60 family CH61_RS15595 PF12792 CSS motif domain associated with EAL CH61_RS15595 PF00563 EAL domain CH61_RS15600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH61_RS15605 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS15610 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS15610 PF12911 N-terminal TM domain of oligopeptide transport permease C CH61_RS15615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH61_RS15615 PF00005 ABC transporter CH61_RS15620 PF13989 YejG-like protein CH61_RS15625 PF07690 Major Facilitator Superfamily CH61_RS15630 PF01479 S4 domain CH61_RS15630 PF00849 RNA pseudouridylate synthase CH61_RS15635 PF00271 Helicase conserved C-terminal domain CH61_RS15635 PF04851 Type III restriction enzyme, res subunit CH61_RS15640 PF01386 Ribosomal L25p family CH61_RS15645 PF01797 Transposase IS200 like CH61_RS15655 PF04245 37-kD nucleoid-associated bacterial protein CH61_RS15660 PF07208 Protein of unknown function (DUF1414) CH61_RS15665 PF00884 Sulfatase CH61_RS15665 PF11893 Domain of unknown function (DUF3413) CH61_RS15680 PF05638 Type VI secretion system effector, Hcp CH61_RS15700 PF00232 Glycosyl hydrolase family 1 CH61_RS15705 PF01418 Helix-turn-helix domain, rpiR family CH61_RS15705 PF01380 SIS domain CH61_RS15710 PF07484 Phage Tail Collar Domain CH61_RS15725 PF04865 Baseplate J-like protein CH61_RS15765 PF17482 Phage tail sheath C-terminal domain CH61_RS15765 PF04984 Phage tail sheath protein subtilisin-like domain CH61_RS15785 PF01261 Xylose isomerase-like TIM barrel CH61_RS15790 PF00455 DeoR C terminal sensor domain CH61_RS15790 PF08220 DeoR-like helix-turn-helix domain CH61_RS15800 PF07005 Sugar-binding N-terminal domain CH61_RS15800 PF17042 Nucleotide-binding C-terminal domain CH61_RS15805 PF06530 Phage antitermination protein Q CH61_RS15810 PF00717 Peptidase S24-like CH61_RS15810 PF01381 Helix-turn-helix CH61_RS15815 PF06183 DinI-like family CH61_RS15820 PF01278 Omptin family CH61_RS15825 PF02743 Cache domain CH61_RS15825 PF00672 HAMP domain CH61_RS15825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH61_RS15830 PF12706 Beta-lactamase superfamily domain CH61_RS15845 PF00144 Beta-lactamase CH61_RS15860 PF01797 Transposase IS200 like CH61_RS15875 PF00267 Gram-negative porin CH61_RS15885 PF07690 Major Facilitator Superfamily CH61_RS15890 PF16359 RcsD-ABL domain CH61_RS15890 PF01627 Hpt domain CH61_RS15890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS15895 PF16359 RcsD-ABL domain CH61_RS15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS15895 PF01627 Hpt domain CH61_RS15900 PF00196 Bacterial regulatory proteins, luxR family CH61_RS15900 PF00072 Response regulator receiver domain CH61_RS15905 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS15905 PF00072 Response regulator receiver domain CH61_RS15905 PF09456 RcsC Alpha-Beta-Loop (ABL) CH61_RS15915 PF03989 DNA gyrase C-terminal domain, beta-propeller CH61_RS15915 PF00521 DNA gyrase/topoisomerase IV, subunit A CH61_RS15925 PF03477 ATP cone domain CH61_RS15925 PF02867 Ribonucleotide reductase, barrel domain CH61_RS15925 PF00317 Ribonucleotide reductase, all-alpha domain CH61_RS15930 PF00268 Ribonucleotide reductase, small chain CH61_RS15935 PF00111 2Fe-2S iron-sulfur cluster binding domain CH61_RS15940 PF03974 Ecotin CH61_RS15945 PF00994 Probable molybdopterin binding domain CH61_RS15950 PF03222 Tryptophan/tyrosine permease family CH61_RS15955 PF07437 YfaZ precursor CH61_RS15960 PF06628 Catalase-related immune-responsive CH61_RS15960 PF00199 Catalase CH61_RS15965 PF13307 Helicase C-terminal domain CH61_RS15965 PF06733 DEAD_2 CH61_RS15970 PF00267 Gram-negative porin CH61_RS15975 PF00892 EamA-like transporter family CH61_RS15985 PF01276 Orn/Lys/Arg decarboxylase, major domain CH61_RS15985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CH61_RS15985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CH61_RS15990 PF13520 Amino acid permease CH61_RS15995 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS16000 PF00005 ABC transporter CH61_RS16005 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS16010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH61_RS16015 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH61_RS16020 PF00581 Rhodanese-like domain CH61_RS16035 PF00005 ABC transporter CH61_RS16040 PF00005 ABC transporter CH61_RS16045 PF02653 Branched-chain amino acid transport system / permease component CH61_RS16050 PF02653 Branched-chain amino acid transport system / permease component CH61_RS16055 PF02954 Bacterial regulatory protein, Fis family CH61_RS16055 PF13188 PAS domain CH61_RS16055 PF00158 Sigma-54 interaction domain CH61_RS16060 PF07308 Protein of unknown function (DUF1456) CH61_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS16070 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS16080 PF00005 ABC transporter CH61_RS16085 PF04226 Transglycosylase associated protein CH61_RS16095 PF01844 HNH endonuclease CH61_RS16100 PF01928 CYTH domain CH61_RS16105 PF09330 D-lactate dehydrogenase, membrane binding CH61_RS16105 PF01565 FAD binding domain CH61_RS16110 PF00768 D-alanyl-D-alanine carboxypeptidase CH61_RS16120 PF01207 Dihydrouridine synthase (Dus) CH61_RS16130 PF01797 Transposase IS200 like CH61_RS16135 PF03825 Nucleoside H+ symporter CH61_RS16140 PF01048 Phosphorylase superfamily CH61_RS16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS16150 PF03466 LysR substrate binding domain CH61_RS16155 PF02028 BCCT, betaine/carnitine/choline family transporter CH61_RS16160 PF00440 Bacterial regulatory proteins, tetR family CH61_RS16160 PF13977 BetI-type transcriptional repressor, C-terminal CH61_RS16165 PF00171 Aldehyde dehydrogenase family CH61_RS16170 PF00732 GMC oxidoreductase CH61_RS16170 PF05199 GMC oxidoreductase CH61_RS16175 PF01797 Transposase IS200 like CH61_RS16185 PF01027 Inhibitor of apoptosis-promoting Bax1 CH61_RS16190 PF02391 MoaE protein CH61_RS16195 PF02597 ThiS family CH61_RS16200 PF01967 MoaC family CH61_RS16205 PF06463 Molybdenum Cofactor Synthesis C CH61_RS16205 PF04055 Radical SAM superfamily CH61_RS16215 PF01933 Uncharacterised protein family UPF0052 CH61_RS16220 PF09905 DNA-binding protein VF530 CH61_RS16225 PF04851 Type III restriction enzyme, res subunit CH61_RS16225 PF17757 UvrB interaction domain CH61_RS16225 PF12344 Ultra-violet resistance protein B CH61_RS16225 PF00271 Helicase conserved C-terminal domain CH61_RS16225 PF02151 UvrB/uvrC motif CH61_RS16230 PF09383 NIL domain CH61_RS16230 PF00005 ABC transporter CH61_RS16240 PF08241 Methyltransferase domain CH61_RS16245 PF00155 Aminotransferase class I and II CH61_RS16250 PF04055 Radical SAM superfamily CH61_RS16250 PF06968 Biotin and Thiamin Synthesis associated domain CH61_RS16255 PF00202 Aminotransferase class-III CH61_RS16260 PF10282 Lactonase, 7-bladed beta-propeller CH61_RS16270 PF03459 TOBE domain CH61_RS16270 PF00005 ABC transporter CH61_RS16275 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS16285 PF10766 Multidrug efflux pump-associated protein AcrZ CH61_RS16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS16290 PF03459 TOBE domain CH61_RS16295 PF00005 ABC transporter CH61_RS16310 PF16363 GDP-mannose 4,6 dehydratase CH61_RS16315 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CH61_RS16315 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CH61_RS16320 PF00288 GHMP kinases N terminal domain CH61_RS16320 PF08544 GHMP kinases C terminal CH61_RS16320 PF10509 Galactokinase galactose-binding signature CH61_RS16330 PF01263 Aldose 1-epimerase CH61_RS16340 PF00300 Histidine phosphatase superfamily (branch 1) CH61_RS16345 PF00793 DAHP synthetase I family CH61_RS16350 PF02796 Helix-turn-helix domain of resolvase CH61_RS16350 PF00665 Integrase core domain CH61_RS16355 PF01695 IstB-like ATP binding protein CH61_RS16360 PF00793 DAHP synthetase I family CH61_RS16365 PF01545 Cation efflux family CH61_RS16370 PF04973 Nicotinamide mononucleotide transporter CH61_RS16375 PF02445 Quinolinate synthetase A protein CH61_RS16395 PF16331 TolA binding protein trimerisation CH61_RS16395 PF13174 Tetratricopeptide repeat CH61_RS16400 PF00691 OmpA family CH61_RS16405 PF04052 TolB amino-terminal domain CH61_RS16405 PF07676 WD40-like Beta Propeller Repeat CH61_RS16410 PF06519 TolA C-terminal CH61_RS16410 PF06519 TolA C-terminal CH61_RS16415 PF02472 Biopolymer transport protein ExbD/TolR CH61_RS16420 PF01618 MotA/TolQ/ExbB proton channel family CH61_RS16425 PF03061 Thioesterase superfamily CH61_RS16430 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CH61_RS16435 PF08173 Membrane bound YbgT-like protein CH61_RS16440 PF02322 Cytochrome bd terminal oxidase subunit II CH61_RS16445 PF01654 Cytochrome bd terminal oxidase subunit I CH61_RS16450 PF00549 CoA-ligase CH61_RS16450 PF02629 CoA binding domain CH61_RS16455 PF08442 ATP-grasp domain CH61_RS16455 PF00549 CoA-ligase CH61_RS16460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH61_RS16460 PF00364 Biotin-requiring enzyme CH61_RS16460 PF02817 e3 binding domain CH61_RS16465 PF00676 Dehydrogenase E1 component CH61_RS16465 PF16078 2-oxoglutarate dehydrogenase N-terminus CH61_RS16465 PF02779 Transketolase, pyrimidine binding domain CH61_RS16465 PF16870 2-oxoglutarate dehydrogenase C-terminal CH61_RS16470 PF13085 2Fe-2S iron-sulfur cluster binding domain CH61_RS16475 PF02910 Fumarate reductase flavoprotein C-term CH61_RS16475 PF00890 FAD binding domain CH61_RS16480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CH61_RS16485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CH61_RS16490 PF00285 Citrate synthase, C-terminal domain CH61_RS16495 PF01025 GrpE CH61_RS16500 PF01513 ATP-NAD kinase CH61_RS16505 PF02463 RecF/RecN/SMC N terminal domain CH61_RS16510 PF04355 SmpA / OmlA family CH61_RS16515 PF03658 RnfH family Ubiquitin CH61_RS16520 PF03364 Polyketide cyclase / dehydrase and lipid transport CH61_RS16525 PF01668 SmpB protein CH61_RS16535 PF01797 Transposase IS200 like CH61_RS16540 PF13356 Arm DNA-binding domain CH61_RS16540 PF00589 Phage integrase family CH61_RS16600 PF05973 Phage derived protein Gp49-like (DUF891) CH61_RS16610 PF00665 Integrase core domain CH61_RS16610 PF02796 Helix-turn-helix domain of resolvase CH61_RS16615 PF01695 IstB-like ATP binding protein CH61_RS16630 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CH61_RS16640 PF00929 Exonuclease CH61_RS16645 PF00075 RNase H CH61_RS16650 PF08241 Methyltransferase domain CH61_RS16655 PF16123 Hydroxyacylglutathione hydrolase C-terminus CH61_RS16655 PF00753 Metallo-beta-lactamase superfamily CH61_RS16660 PF01476 LysM domain CH61_RS16660 PF01464 Transglycosylase SLT domain CH61_RS16665 PF03372 Endonuclease/Exonuclease/phosphatase family CH61_RS16675 PF00248 Aldo/keto reductase family CH61_RS16715 PF09383 NIL domain CH61_RS16715 PF00005 ABC transporter CH61_RS16720 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS16725 PF03180 NLPA lipoprotein CH61_RS16730 PF16358 RcsF lipoprotein CH61_RS16735 PF18389 TrmO C-terminal domain CH61_RS16735 PF01980 tRNA-methyltransferase O CH61_RS16740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH61_RS16740 PF04073 Aminoacyl-tRNA editing domain CH61_RS16740 PF03129 Anticodon binding domain CH61_RS16745 PF04170 NlpE N-terminal domain CH61_RS16745 PF17185 NlpE C-terminal OB domain CH61_RS16750 PF00472 RF-1 domain CH61_RS16755 PF07152 YaeQ protein CH61_RS16760 PF06786 Uncharacterised protein family (UPF0253) CH61_RS16765 PF07073 Modulator of Rho-dependent transcription termination (ROF) CH61_RS16770 PF00034 Cytochrome c CH61_RS16775 PF11734 TilS substrate C-terminal domain CH61_RS16775 PF09179 TilS substrate binding domain CH61_RS16775 PF01171 PP-loop family CH61_RS16780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH61_RS16785 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CH61_RS16790 PF14579 Helix-hairpin-helix motif CH61_RS16790 PF07733 Bacterial DNA polymerase III alpha NTPase domain CH61_RS16790 PF01336 OB-fold nucleic acid binding domain CH61_RS16790 PF02811 PHP domain CH61_RS16790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CH61_RS16795 PF01351 Ribonuclease HII CH61_RS16800 PF02684 Lipid-A-disaccharide synthetase CH61_RS16805 PF00132 Bacterial transferase hexapeptide (six repeats) CH61_RS16805 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CH61_RS16810 PF07977 FabA-like domain CH61_RS16815 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CH61_RS16815 PF00132 Bacterial transferase hexapeptide (six repeats) CH61_RS16820 PF03938 Outer membrane protein (OmpH-like) CH61_RS16825 PF01103 Surface antigen CH61_RS16825 PF07244 Surface antigen variable number repeat CH61_RS16830 PF17820 PDZ domain CH61_RS16830 PF02163 Peptidase family M50 CH61_RS16840 PF01255 Putative undecaprenyl diphosphate synthase CH61_RS16845 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CH61_RS16845 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CH61_RS16845 PF13288 DXP reductoisomerase C-terminal domain CH61_RS16850 PF01765 Ribosome recycling factor CH61_RS16855 PF00696 Amino acid kinase family CH61_RS16860 PF00889 Elongation factor TS CH61_RS16865 PF00318 Ribosomal protein S2 CH61_RS16870 PF00557 Metallopeptidase family M24 CH61_RS16875 PF01909 Nucleotidyltransferase domain CH61_RS16875 PF01966 HD domain CH61_RS16875 PF08335 GlnD PII-uridylyltransferase CH61_RS16875 PF01842 ACT domain CH61_RS16880 PF14602 Hexapeptide repeat of succinyl-transferase CH61_RS16880 PF00132 Bacterial transferase hexapeptide (six repeats) CH61_RS16880 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CH61_RS16885 PF11944 Protein of unknown function (DUF3461) CH61_RS16890 PF00258 Flavodoxin CH61_RS16895 PF00849 RNA pseudouridylate synthase CH61_RS16900 PF04287 tRNA pseudouridine synthase C CH61_RS16905 PF01797 Transposase IS200 like CH61_RS16910 PF07348 Syd protein (SUKH-2) CH61_RS16915 PF14489 QueF-like protein CH61_RS16915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CH61_RS16920 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CH61_RS16920 PF03641 Possible lysine decarboxylase CH61_RS16920 PF11892 Domain of unknown function (DUF3412) CH61_RS16925 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH61_RS16925 PF01367 5'-3' exonuclease, C-terminal SAM fold CH61_RS16930 PF01728 FtsJ-like methyltransferase CH61_RS16930 PF18125 RlmM ferredoxin-like domain CH61_RS16935 PF04241 Protein of unknown function (DUF423) CH61_RS16940 PF03466 LysR substrate binding domain CH61_RS16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS16945 PF00266 Aminotransferase class-V CH61_RS16950 PF02657 Fe-S metabolism associated domain CH61_RS16955 PF00899 ThiF family CH61_RS16960 PF06725 3D domain CH61_RS16960 PF03562 MltA specific insert domain CH61_RS16975 PF11741 AMIN domain CH61_RS16975 PF01520 N-acetylmuramoyl-L-alanine amidase CH61_RS16980 PF00583 Acetyltransferase (GNAT) family CH61_RS16980 PF00696 Amino acid kinase family CH61_RS16985 PF13538 UvrD-like helicase C-terminal domain CH61_RS16990 PF12705 PD-(D/E)XK nuclease superfamily CH61_RS16990 PF00580 UvrD/REP helicase N-terminal domain CH61_RS16990 PF13361 UvrD-like helicase C-terminal domain CH61_RS16995 PF16187 Middle or third domain of peptidase_M16 CH61_RS16995 PF05193 Peptidase M16 inactive domain CH61_RS16995 PF00675 Insulinase (Peptidase family M16) CH61_RS17000 PF17946 RecC C-terminal domain CH61_RS17020 PF01695 IstB-like ATP binding protein CH61_RS17030 PF00501 AMP-binding enzyme CH61_RS17030 PF00109 Beta-ketoacyl synthase, N-terminal domain CH61_RS17030 PF00550 Phosphopantetheine attachment site CH61_RS17030 PF02801 Beta-ketoacyl synthase, C-terminal domain CH61_RS17030 PF16197 Ketoacyl-synthetase C-terminal extension CH61_RS17030 PF00668 Condensation domain CH61_RS17030 PF13193 AMP-binding enzyme C-terminal domain CH61_RS17030 PF00202 Aminotransferase class-III CH61_RS17035 PF07715 TonB-dependent Receptor Plug Domain CH61_RS17035 PF00593 TonB dependent receptor CH61_RS17040 PF01546 Peptidase family M20/M25/M40 CH61_RS17040 PF07687 Peptidase dimerisation domain CH61_RS17045 PF03806 AbgT putative transporter family CH61_RS17050 PF14496 C-terminal novel E3 ligase, LRR-interacting CH61_RS17050 PF12468 Type III secretion system leucine rich repeat protein CH61_RS17055 PF12468 Type III secretion system leucine rich repeat protein CH61_RS17055 PF14496 C-terminal novel E3 ligase, LRR-interacting CH61_RS17055 PF12468 Type III secretion system leucine rich repeat protein CH61_RS17055 PF14496 C-terminal novel E3 ligase, LRR-interacting CH61_RS17060 PF12468 Type III secretion system leucine rich repeat protein CH61_RS17060 PF14496 C-terminal novel E3 ligase, LRR-interacting CH61_RS17065 PF03797 Autotransporter beta-domain CH61_RS17075 PF07906 ShET2 enterotoxin, N-terminal region CH61_RS17080 PF00873 AcrB/AcrD/AcrF family CH61_RS17085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH61_RS17085 PF00529 HlyD membrane-fusion protein of T1SS CH61_RS17095 PF08448 PAS fold CH61_RS17095 PF00563 EAL domain CH61_RS17095 PF00990 Diguanylate cyclase, GGDEF domain CH61_RS17095 PF08447 PAS fold CH61_RS17100 PF13333 Integrase core domain CH61_RS17100 PF13276 HTH-like domain CH61_RS17100 PF00665 Integrase core domain CH61_RS17115 PF00593 TonB dependent receptor CH61_RS17115 PF07715 TonB-dependent Receptor Plug Domain CH61_RS17120 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CH61_RS17125 PF04183 IucA / IucC family CH61_RS17125 PF06276 Ferric iron reductase FhuF-like transporter CH61_RS17135 PF06276 Ferric iron reductase FhuF-like transporter CH61_RS17135 PF04183 IucA / IucC family CH61_RS17140 PF04183 IucA / IucC family CH61_RS17140 PF06276 Ferric iron reductase FhuF-like transporter CH61_RS17160 PF00196 Bacterial regulatory proteins, luxR family CH61_RS17160 PF03472 Autoinducer binding domain CH61_RS17165 PF00765 Autoinducer synthase CH61_RS17170 PF02517 CPBP intramembrane metalloprotease CH61_RS17180 PF03811 InsA N-terminal domain CH61_RS17180 PF12759 InsA C-terminal domain CH61_RS17200 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH61_RS17215 PF05736 OprF membrane domain CH61_RS17215 PF00691 OmpA family CH61_RS17225 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS17225 PF17871 AAA lid domain CH61_RS17225 PF07724 AAA domain (Cdc48 subfamily) CH61_RS17225 PF10431 C-terminal, D2-small domain, of ClpB protein CH61_RS17230 PF04717 Type VI secretion system, phage-baseplate injector CH61_RS17230 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CH61_RS17230 PF13296 Putative type VI secretion system Rhs element Vgr CH61_RS17250 PF03811 InsA N-terminal domain CH61_RS17250 PF12759 InsA C-terminal domain CH61_RS17275 PF03811 InsA N-terminal domain CH61_RS17275 PF12759 InsA C-terminal domain CH61_RS17280 PF03400 IS1 transposase CH61_RS17290 PF02899 Phage integrase, N-terminal SAM-like domain CH61_RS17290 PF00589 Phage integrase family CH61_RS17300 PF01276 Orn/Lys/Arg decarboxylase, major domain CH61_RS17300 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CH61_RS17300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CH61_RS17305 PF13407 Periplasmic binding protein domain CH61_RS17310 PF00005 ABC transporter CH61_RS17315 PF02653 Branched-chain amino acid transport system / permease component CH61_RS17320 PF07715 TonB-dependent Receptor Plug Domain CH61_RS17330 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CH61_RS17330 PF01464 Transglycosylase SLT domain CH61_RS17335 PF04362 Bacterial Fe(2+) trafficking CH61_RS17340 PF14815 NUDIX domain CH61_RS17340 PF00730 HhH-GPD superfamily base excision DNA repair protein CH61_RS17340 PF10576 Iron-sulfur binding domain of endonuclease III CH61_RS17340 PF00633 Helix-hairpin-helix motif CH61_RS17345 PF02390 Putative methyltransferase CH61_RS17350 PF04320 Protein with unknown function (DUF469) CH61_RS17355 PF04960 Glutaminase CH61_RS17360 PF11101 Protein of unknown function (DUF2884) CH61_RS17365 PF11101 Protein of unknown function (DUF2884) CH61_RS17370 PF11713 Peptidase C80 family CH61_RS17370 PF11647 Membrane Localization Domain CH61_RS17370 PF12146 Serine aminopeptidase, S33 CH61_RS17370 PF16671 Actin cross-linking domain CH61_RS17370 PF07634 RtxA repeat CH61_RS17375 PF04055 Radical SAM superfamily CH61_RS17375 PF06969 HemN C-terminal domain CH61_RS17380 PF01725 Ham1 family CH61_RS17385 PF02594 Uncharacterised ACR, YggU family COG1872 CH61_RS17390 PF02325 YGGT family CH61_RS17395 PF03807 NADP oxidoreductase coenzyme F420-dependent CH61_RS17395 PF14748 Pyrroline-5-carboxylate reductase dimerisation CH61_RS17400 PF01168 Alanine racemase, N-terminal domain CH61_RS17405 PF00437 Type II/IV secretion system protein CH61_RS17410 PF04371 Porphyromonas-type peptidyl-arginine deiminase CH61_RS17415 PF00795 Carbon-nitrogen hydrolase CH61_RS17420 PF03652 Holliday junction resolvase CH61_RS17425 PF02622 Uncharacterized ACR, COG1678 CH61_RS17430 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CH61_RS17430 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CH61_RS17435 PF04452 RNA methyltransferase CH61_RS17440 PF04231 Endonuclease I CH61_RS17445 PF10263 SprT-like family CH61_RS17445 PF17283 SprT-like zinc ribbon domain CH61_RS17450 PF02773 S-adenosylmethionine synthetase, C-terminal domain CH61_RS17450 PF02772 S-adenosylmethionine synthetase, central domain CH61_RS17450 PF00438 S-adenosylmethionine synthetase, N-terminal domain CH61_RS17455 PF17810 Arginine decarboxylase helical bundle domain CH61_RS17455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CH61_RS17455 PF17944 Arginine decarboxylase C-terminal helical extension CH61_RS17465 PF01435 Peptidase family M48 CH61_RS17470 PF00456 Transketolase, thiamine diphosphate binding domain CH61_RS17470 PF02780 Transketolase, C-terminal domain CH61_RS17470 PF02779 Transketolase, pyrimidine binding domain CH61_RS17475 PF01797 Transposase IS200 like CH61_RS17480 PF02796 Helix-turn-helix domain of resolvase CH61_RS17480 PF00665 Integrase core domain CH61_RS17490 PF01695 IstB-like ATP binding protein CH61_RS17495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CH61_RS17495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH61_RS17500 PF00162 Phosphoglycerate kinase CH61_RS17505 PF01116 Fructose-bisphosphate aldolase class-II CH61_RS17515 PF05552 Conserved TM helix CH61_RS17515 PF00924 Mechanosensitive ion channel CH61_RS17520 PF01810 LysE type translocator CH61_RS17525 PF04402 Protein of unknown function (DUF541) CH61_RS17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS17530 PF03466 LysR substrate binding domain CH61_RS17535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CH61_RS17540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH61_RS17540 PF01842 ACT domain CH61_RS17540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH61_RS17545 PF01812 5-formyltetrahydrofolate cyclo-ligase family CH61_RS17550 PF05164 Cell division protein ZapA CH61_RS17555 PF03695 Uncharacterised protein family (UPF0149) CH61_RS17560 PF00557 Metallopeptidase family M24 CH61_RS17560 PF05195 Aminopeptidase P, N-terminal domain CH61_RS17565 PF01494 FAD binding domain CH61_RS17570 PF01494 FAD binding domain CH61_RS17575 PF01571 Aminomethyltransferase folate-binding domain CH61_RS17575 PF08669 Glycine cleavage T-protein C-terminal barrel domain CH61_RS17580 PF01597 Glycine cleavage H-protein CH61_RS17585 PF02347 Glycine cleavage system P-protein CH61_RS17600 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS17600 PF05658 Head domain of trimeric autotransporter adhesin CH61_RS17600 PF03895 YadA-like membrane anchor domain CH61_RS17600 PF05662 Coiled stalk of trimeric autotransporter adhesin CH61_RS17610 PF03006 Haemolysin-III related CH61_RS17620 PF01571 Aminomethyltransferase folate-binding domain CH61_RS17625 PF03937 Flavinator of succinate dehydrogenase CH61_RS17630 PF07254 Membrane-bound toxin component of toxin-antitoxin system CH61_RS17635 PF00486 Transcriptional regulatory protein, C terminal CH61_RS17635 PF00072 Response regulator receiver domain CH61_RS17640 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS17640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS17640 PF00672 HAMP domain CH61_RS17645 PF06123 Inner membrane protein CreD CH61_RS17650 PF00258 Flavodoxin CH61_RS17655 PF02899 Phage integrase, N-terminal SAM-like domain CH61_RS17655 PF00589 Phage integrase family CH61_RS17660 PF10411 Disulfide bond isomerase protein N-terminus CH61_RS17660 PF13098 Thioredoxin-like domain CH61_RS17665 PF17768 RecJ OB domain CH61_RS17665 PF02272 DHHA1 domain CH61_RS17665 PF01368 DHH family CH61_RS17670 PF03462 PCRF domain CH61_RS17670 PF00472 RF-1 domain CH61_RS17675 PF01336 OB-fold nucleic acid binding domain CH61_RS17675 PF00152 tRNA synthetases class II (D, K and N) CH61_RS17685 PF00589 Phage integrase family CH61_RS17685 PF13356 Arm DNA-binding domain CH61_RS17685 PF14659 Phage integrase, N-terminal SAM-like domain CH61_RS17710 PF15723 Motility quorum-sensing regulator, toxin of MqsA CH61_RS17715 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CH61_RS17810 PF03551 Transcriptional regulator PadR-like family CH61_RS17815 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CH61_RS17825 PF13407 Periplasmic binding protein domain CH61_RS17830 PF02653 Branched-chain amino acid transport system / permease component CH61_RS17835 PF00005 ABC transporter CH61_RS17840 PF00005 ABC transporter CH61_RS17840 PF17912 MalK OB fold domain CH61_RS17845 PF13416 Bacterial extracellular solute-binding protein CH61_RS17850 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS17855 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS17860 PF07745 Glycosyl hydrolase family 53 CH61_RS17865 PF08532 Beta-galactosidase trimerisation domain CH61_RS17865 PF08533 Beta-galactosidase C-terminal domain CH61_RS17865 PF02449 Beta-galactosidase CH61_RS17870 PF00367 phosphotransferase system, EIIB CH61_RS17870 PF02378 Phosphotransferase system, EIIC CH61_RS17875 PF02264 LamB porin CH61_RS17880 PF00356 Bacterial regulatory proteins, lacI family CH61_RS17885 PF17137 Domain of unknown function (DUF5110) CH61_RS17885 PF13802 Galactose mutarotase-like CH61_RS17885 PF01055 Glycosyl hydrolases family 31 CH61_RS17885 PF16338 Domain of unknown function (DUF4968) CH61_RS17890 PF07690 Major Facilitator Superfamily CH61_RS17895 PF00356 Bacterial regulatory proteins, lacI family CH61_RS17910 PF01116 Fructose-bisphosphate aldolase class-II CH61_RS17920 PF00884 Sulfatase CH61_RS17925 PF13186 Iron-sulfur cluster-binding domain CH61_RS17925 PF04055 Radical SAM superfamily CH61_RS17930 PF07470 Glycosyl Hydrolase Family 88 CH61_RS17940 PF01979 Amidohydrolase family CH61_RS17945 PF03610 PTS system fructose IIA component CH61_RS17950 PF03613 PTS system mannose/fructose/sorbose family IID component CH61_RS17955 PF03609 PTS system sorbose-specific iic component CH61_RS17960 PF03830 PTS system sorbose subfamily IIB component CH61_RS17965 PF01380 SIS domain CH61_RS17970 PF08013 Tagatose 6 phosphate kinase CH61_RS17975 PF08220 DeoR-like helix-turn-helix domain CH61_RS17975 PF00455 DeoR C terminal sensor domain CH61_RS17980 PF00884 Sulfatase CH61_RS17985 PF01797 Transposase IS200 like CH61_RS17990 PF02796 Helix-turn-helix domain of resolvase CH61_RS17990 PF00665 Integrase core domain CH61_RS18000 PF01695 IstB-like ATP binding protein CH61_RS18010 PF02278 Polysaccharide lyase family 8, super-sandwich domain CH61_RS18010 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CH61_RS18010 PF09093 Lyase, catalytic CH61_RS18010 PF09092 Lyase, N terminal CH61_RS18035 PF00484 Carbonic anhydrase CH61_RS18050 PF03958 Bacterial type II/III secretion system short domain CH61_RS18050 PF00263 Bacterial type II and III secretion system protein CH61_RS18055 PF00437 Type II/IV secretion system protein CH61_RS18065 PF00482 Type II secretion system (T2SS), protein F CH61_RS18070 PF08334 Type II secretion system (T2SS), protein G CH61_RS18070 PF07963 Prokaryotic N-terminal methylation motif CH61_RS18085 PF07963 Prokaryotic N-terminal methylation motif CH61_RS18085 PF11612 Type II secretion system (T2SS), protein J CH61_RS18105 PF06750 Bacterial Peptidase A24 N-terminal domain CH61_RS18105 PF01478 Type IV leader peptidase family CH61_RS18125 PF02203 Tar ligand binding domain homologue CH61_RS18125 PF00672 HAMP domain CH61_RS18125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH61_RS18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS18140 PF03466 LysR substrate binding domain CH61_RS18145 PF07690 Major Facilitator Superfamily CH61_RS18150 PF03466 LysR substrate binding domain CH61_RS18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS18155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CH61_RS18155 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CH61_RS18160 PF00356 Bacterial regulatory proteins, lacI family CH61_RS18165 PF01568 Molydopterin dinucleotide binding domain CH61_RS18165 PF00384 Molybdopterin oxidoreductase CH61_RS18170 PF01553 Acyltransferase CH61_RS18170 PF13193 AMP-binding enzyme C-terminal domain CH61_RS18170 PF00501 AMP-binding enzyme CH61_RS18175 PF07690 Major Facilitator Superfamily CH61_RS18190 PF00248 Aldo/keto reductase family CH61_RS18195 PF02976 DNA mismatch repair enzyme MutH CH61_RS18210 PF00293 NUDIX domain CH61_RS18215 PF01590 GAF domain CH61_RS18215 PF05524 PEP-utilising enzyme, N-terminal CH61_RS18215 PF00391 PEP-utilising enzyme, mobile domain CH61_RS18215 PF02896 PEP-utilising enzyme, TIM barrel domain CH61_RS18220 PF01790 Prolipoprotein diacylglyceryl transferase CH61_RS18225 PF00303 Thymidylate synthase CH61_RS18240 PF00665 Integrase core domain CH61_RS18240 PF02796 Helix-turn-helix domain of resolvase CH61_RS18245 PF01695 IstB-like ATP binding protein CH61_RS18250 PF00501 AMP-binding enzyme CH61_RS18250 PF08242 Methyltransferase domain CH61_RS18250 PF00550 Phosphopantetheine attachment site CH61_RS18250 PF00668 Condensation domain CH61_RS18255 PF00668 Condensation domain CH61_RS18255 PF13193 AMP-binding enzyme C-terminal domain CH61_RS18255 PF00501 AMP-binding enzyme CH61_RS18260 PF00550 Phosphopantetheine attachment site CH61_RS18260 PF08242 Methyltransferase domain CH61_RS18260 PF00668 Condensation domain CH61_RS18260 PF00501 AMP-binding enzyme CH61_RS18275 PF00975 Thioesterase domain CH61_RS18285 PF00664 ABC transporter transmembrane region CH61_RS18285 PF00005 ABC transporter CH61_RS18285 PF04954 Siderophore-interacting protein CH61_RS18285 PF08021 Siderophore-interacting FAD-binding domain CH61_RS18290 PF00005 ABC transporter CH61_RS18290 PF00664 ABC transporter transmembrane region CH61_RS18305 PF02447 GntP family permease CH61_RS18315 PF12951 Passenger-associated-transport-repeat CH61_RS18320 PF04717 Type VI secretion system, phage-baseplate injector CH61_RS18330 PF03527 RHS protein CH61_RS18330 PF05593 RHS Repeat CH61_RS18345 PF00939 Sodium:sulfate symporter transmembrane region CH61_RS18350 PF00356 Bacterial regulatory proteins, lacI family CH61_RS18400 PF00691 OmpA family CH61_RS18400 PF13677 Membrane MotB of proton-channel complex MotA/MotB CH61_RS18405 PF01618 MotA/TolQ/ExbB proton channel family CH61_RS18410 PF04542 Sigma-70 region 2 CH61_RS18410 PF04545 Sigma-70, region 4 CH61_RS18435 PF02465 Flagellar hook-associated protein 2 N-terminus CH61_RS18435 PF07195 Flagellar hook-associated protein 2 C-terminus CH61_RS18435 PF07196 Flagellin hook IN motif CH61_RS18440 PF00669 Bacterial flagellin N-terminal helical region CH61_RS18440 PF00700 Bacterial flagellin C-terminal helical region CH61_RS18445 PF00700 Bacterial flagellin C-terminal helical region CH61_RS18445 PF00669 Bacterial flagellin N-terminal helical region CH61_RS18450 PF00669 Bacterial flagellin N-terminal helical region CH61_RS18450 PF00700 Bacterial flagellin C-terminal helical region CH61_RS18455 PF00486 Transcriptional regulatory protein, C terminal CH61_RS18455 PF18500 CadC C-terminal domain 1 CH61_RS18475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH61_RS18475 PF00460 Flagella basal body rod protein CH61_RS18485 PF02119 Flagellar P-ring protein CH61_RS18490 PF02107 Flagellar L-ring protein CH61_RS18495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH61_RS18495 PF00460 Flagella basal body rod protein CH61_RS18500 PF00460 Flagella basal body rod protein CH61_RS18500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH61_RS18510 PF01797 Transposase IS200 like CH61_RS18520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH61_RS18520 PF00460 Flagella basal body rod protein CH61_RS18520 PF07559 Flagellar basal body protein FlaE CH61_RS18525 PF03963 Flagellar hook capping protein - N-terminal region CH61_RS18525 PF13861 FlgD Tudor-like domain CH61_RS18525 PF13860 FlgD Ig-like domain CH61_RS18530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH61_RS18530 PF00460 Flagella basal body rod protein CH61_RS18535 PF00460 Flagella basal body rod protein CH61_RS18540 PF13144 Chaperone for flagella basal body P-ring formation CH61_RS18560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH61_RS18560 PF18269 T3SS EscN ATPase C-terminal domain CH61_RS18575 PF08345 Flagellar M-ring protein C-terminal CH61_RS18575 PF01514 Secretory protein of YscJ/FliF family CH61_RS18580 PF02049 Flagellar hook-basal body complex protein FliE CH61_RS18585 PF00072 Response regulator receiver domain CH61_RS18585 PF02954 Bacterial regulatory protein, Fis family CH61_RS18585 PF00158 Sigma-54 interaction domain CH61_RS18595 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH61_RS18600 PF00813 FliP family CH61_RS18605 PF01313 Bacterial export proteins, family 3 CH61_RS18610 PF01311 Bacterial export proteins, family 1 CH61_RS18615 PF01312 FlhB HrpN YscU SpaS Family CH61_RS18635 PF01497 Periplasmic binding protein CH61_RS18640 PF00419 Fimbrial protein CH61_RS18640 PF09222 Fimbrial adhesin F17-AG, lectin domain CH61_RS18645 PF02753 Pili assembly chaperone PapD, C-terminal domain CH61_RS18645 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS18650 PF13954 PapC N-terminal domain CH61_RS18650 PF00577 Outer membrane usher protein CH61_RS18650 PF13953 PapC C-terminal domain CH61_RS18655 PF01797 Transposase IS200 like CH61_RS18665 PF01797 Transposase IS200 like CH61_RS18680 PF13629 Pilus formation protein N terminal region CH61_RS18680 PF04972 BON domain CH61_RS18680 PF00263 Bacterial type II and III secretion system protein CH61_RS18685 PF00263 Bacterial type II and III secretion system protein CH61_RS18685 PF13629 Pilus formation protein N terminal region CH61_RS18685 PF04972 BON domain CH61_RS18700 PF00437 Type II/IV secretion system protein CH61_RS18735 PF02472 Biopolymer transport protein ExbD/TolR CH61_RS18740 PF01618 MotA/TolQ/ExbB proton channel family CH61_RS18745 PF01053 Cys/Met metabolism PLP-dependent enzyme CH61_RS18750 PF09335 SNARE associated Golgi protein CH61_RS18755 PF06719 AraC-type transcriptional regulator N-terminus CH61_RS18755 PF12833 Helix-turn-helix domain CH61_RS18760 PF00465 Iron-containing alcohol dehydrogenase CH61_RS18770 PF00248 Aldo/keto reductase family CH61_RS18780 PF07731 Multicopper oxidase CH61_RS18780 PF07732 Multicopper oxidase CH61_RS18785 PF01553 Acyltransferase CH61_RS18790 PF03989 DNA gyrase C-terminal domain, beta-propeller CH61_RS18790 PF00521 DNA gyrase/topoisomerase IV, subunit A CH61_RS18800 PF02525 Flavodoxin-like fold CH61_RS18805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS18805 PF03466 LysR substrate binding domain CH61_RS18810 PF01751 Toprim domain CH61_RS18810 PF00986 DNA gyrase B subunit, carboxyl terminus CH61_RS18810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS18810 PF00204 DNA gyrase B CH61_RS18815 PF05728 Uncharacterised protein family (UPF0227) CH61_RS18820 PF00149 Calcineurin-like phosphoesterase CH61_RS18825 PF06853 Protein of unknown function (DUF1249) CH61_RS18830 PF00293 NUDIX domain CH61_RS18835 PF02321 Outer membrane efflux protein CH61_RS18845 PF06693 Protein of unknown function (DUF1190) CH61_RS18850 PF03738 Glutathionylspermidine synthase preATP-grasp CH61_RS18855 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CH61_RS18860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CH61_RS18870 PF04380 Membrane fusogenic activity CH61_RS18875 PF13520 Amino acid permease CH61_RS18880 PF00294 pfkB family carbohydrate kinase CH61_RS18880 PF01467 Cytidylyltransferase-like CH61_RS18885 PF08335 GlnD PII-uridylyltransferase CH61_RS18885 PF03710 Glutamate-ammonia ligase adenylyltransferase CH61_RS18890 PF01928 CYTH domain CH61_RS18895 PF08239 Bacterial SH3 domain CH61_RS18900 PF12627 Probable RNA and SrmB- binding site of polymerase A CH61_RS18900 PF01966 HD domain CH61_RS18900 PF01743 Poly A polymerase head domain CH61_RS18905 PF02673 Bacitracin resistance protein BacA CH61_RS18910 PF02152 Dihydroneopterin aldolase CH61_RS18915 PF02660 Glycerol-3-phosphate acyltransferase CH61_RS18920 PF00814 Glycoprotease family CH61_RS18925 PF01165 Ribosomal protein S21 CH61_RS18930 PF10410 DnaB-helicase binding domain of primase CH61_RS18930 PF08278 DNA primase DnaG DnaB-binding CH61_RS18930 PF01807 CHC2 zinc finger CH61_RS18930 PF08275 DNA primase catalytic core, N-terminal domain CH61_RS18935 PF04546 Sigma-70, non-essential region CH61_RS18935 PF04539 Sigma-70 region 3 CH61_RS18935 PF04545 Sigma-70, region 4 CH61_RS18935 PF03979 Sigma-70 factor, region 1.1 CH61_RS18935 PF04542 Sigma-70 region 2 CH61_RS18935 PF00140 Sigma-70 factor, region 1.2 CH61_RS18970 PF01695 IstB-like ATP binding protein CH61_RS18975 PF00665 Integrase core domain CH61_RS18975 PF02796 Helix-turn-helix domain of resolvase CH61_RS19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS19005 PF03466 LysR substrate binding domain CH61_RS19025 PF01042 Endoribonuclease L-PSP CH61_RS19045 PF00155 Aminotransferase class I and II CH61_RS19065 PF00529 HlyD membrane-fusion protein of T1SS CH61_RS19065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH61_RS19070 PF04632 Fusaric acid resistance protein family CH61_RS19080 PF01915 Glycosyl hydrolase family 3 C-terminal domain CH61_RS19080 PF14310 Fibronectin type III-like domain CH61_RS19080 PF00933 Glycosyl hydrolase family 3 N terminal domain CH61_RS19090 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS19095 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS19100 PF01547 Bacterial extracellular solute-binding protein CH61_RS19105 PF00356 Bacterial regulatory proteins, lacI family CH61_RS19110 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CH61_RS19115 PF00005 ABC transporter CH61_RS19115 PF03459 TOBE domain CH61_RS19115 PF17912 MalK OB fold domain CH61_RS19135 PF04829 Pre-toxin domain with VENN motif CH61_RS19135 PF05860 haemagglutination activity domain CH61_RS19135 PF13332 Hemagglutinin repeat CH61_RS19135 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS19140 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS19140 PF13332 Hemagglutinin repeat CH61_RS19140 PF05860 haemagglutination activity domain CH61_RS19140 PF04829 Pre-toxin domain with VENN motif CH61_RS19150 PF04829 Pre-toxin domain with VENN motif CH61_RS19150 PF13332 Hemagglutinin repeat CH61_RS19155 PF13332 Hemagglutinin repeat CH61_RS19155 PF04829 Pre-toxin domain with VENN motif CH61_RS19165 PF04829 Pre-toxin domain with VENN motif CH61_RS19165 PF13018 Extended Signal Peptide of Type V secretion system CH61_RS19165 PF05860 haemagglutination activity domain CH61_RS19165 PF13332 Hemagglutinin repeat CH61_RS19170 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH61_RS19170 PF17287 POTRA domain CH61_RS19170 PF08479 POTRA domain, ShlB-type CH61_RS19175 PF00092 von Willebrand factor type A domain CH61_RS19180 PF02342 TerD domain CH61_RS19190 PF00092 von Willebrand factor type A domain CH61_RS19210 PF03729 Short repeat of unknown function (DUF308) CH61_RS19215 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS19215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH61_RS19220 PF05175 Methyltransferase small domain CH61_RS19225 PF03797 Autotransporter beta-domain CH61_RS19230 PF01863 Protein of unknown function DUF45 CH61_RS19235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH61_RS19240 PF00375 Sodium:dicarboxylate symporter family CH61_RS19250 PF01797 Transposase IS200 like CH61_RS19255 PF10688 Bacterial inner membrane protein CH61_RS19260 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CH61_RS19260 PF08666 SAF domain CH61_RS19265 PF01232 Mannitol dehydrogenase Rossmann domain CH61_RS19265 PF08125 Mannitol dehydrogenase C-terminal domain CH61_RS19270 PF02614 Glucuronate isomerase CH61_RS19280 PF07690 Major Facilitator Superfamily CH61_RS19285 PF00392 Bacterial regulatory proteins, gntR family CH61_RS19285 PF07729 FCD domain CH61_RS19295 PF09335 SNARE associated Golgi protein CH61_RS19300 PF13721 SecD export protein N-terminal TM region CH61_RS19315 PF05957 Bacterial protein of unknown function (DUF883) CH61_RS19320 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CH61_RS19330 PF07681 DoxX CH61_RS19335 PF13409 Glutathione S-transferase, N-terminal domain CH61_RS19340 PF02796 Helix-turn-helix domain of resolvase CH61_RS19340 PF00665 Integrase core domain CH61_RS19345 PF01695 IstB-like ATP binding protein CH61_RS19350 PF00293 NUDIX domain CH61_RS19355 PF07517 SecA DEAD-like domain CH61_RS19355 PF02810 SEC-C motif CH61_RS19355 PF01043 SecA preprotein cross-linking domain CH61_RS19355 PF07516 SecA Wing and Scaffold domain CH61_RS19360 PF06558 Secretion monitor precursor protein (SecM) CH61_RS19370 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CH61_RS19375 PF00091 Tubulin/FtsZ family, GTPase domain CH61_RS19375 PF12327 FtsZ family, C-terminal domain CH61_RS19380 PF02491 SHS2 domain inserted in FTSA CH61_RS19385 PF03799 Cell division protein FtsQ CH61_RS19385 PF08478 POTRA domain, FtsQ-type CH61_RS19390 PF07478 D-ala D-ala ligase C-terminus CH61_RS19390 PF01820 D-ala D-ala ligase N-terminus CH61_RS19395 PF08245 Mur ligase middle domain CH61_RS19395 PF01225 Mur ligase family, catalytic domain CH61_RS19395 PF02875 Mur ligase family, glutamate ligase domain CH61_RS19400 PF04101 Glycosyltransferase family 28 C-terminal domain CH61_RS19400 PF03033 Glycosyltransferase family 28 N-terminal domain CH61_RS19405 PF01098 Cell cycle protein CH61_RS19410 PF02875 Mur ligase family, glutamate ligase domain CH61_RS19410 PF08245 Mur ligase middle domain CH61_RS19415 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CH61_RS19415 PF00953 Glycosyl transferase family 4 CH61_RS19420 PF01225 Mur ligase family, catalytic domain CH61_RS19420 PF08245 Mur ligase middle domain CH61_RS19420 PF02875 Mur ligase family, glutamate ligase domain CH61_RS19425 PF08245 Mur ligase middle domain CH61_RS19425 PF02875 Mur ligase family, glutamate ligase domain CH61_RS19425 PF01225 Mur ligase family, catalytic domain CH61_RS19430 PF00905 Penicillin binding protein transpeptidase domain CH61_RS19430 PF03717 Penicillin-binding Protein dimerisation domain CH61_RS19435 PF04999 Cell division protein FtsL CH61_RS19440 PF01795 MraW methylase family CH61_RS19445 PF02381 MraZ protein, putative antitoxin-like CH61_RS19450 PF06610 L-alanine exporter CH61_RS19455 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH61_RS19455 PF00356 Bacterial regulatory proteins, lacI family CH61_RS19465 PF01797 Transposase IS200 like CH61_RS19470 PF10369 Small subunit of acetolactate synthase CH61_RS19475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH61_RS19475 PF00205 Thiamine pyrophosphate enzyme, central domain CH61_RS19475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH61_RS19485 PF00501 AMP-binding enzyme CH61_RS19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS19495 PF03466 LysR substrate binding domain CH61_RS19510 PF01797 Transposase IS200 like CH61_RS19515 PF08502 LeuA allosteric (dimerisation) domain CH61_RS19515 PF00682 HMGL-like CH61_RS19520 PF00180 Isocitrate/isopropylmalate dehydrogenase CH61_RS19525 PF00330 Aconitase family (aconitate hydratase) CH61_RS19530 PF00694 Aconitase C-terminal domain CH61_RS19535 PF07690 Major Facilitator Superfamily CH61_RS19540 PF02796 Helix-turn-helix domain of resolvase CH61_RS19540 PF00665 Integrase core domain CH61_RS19550 PF01695 IstB-like ATP binding protein CH61_RS19555 PF07690 Major Facilitator Superfamily CH61_RS19565 PF12793 Sugar transport-related sRNA regulator N-term CH61_RS19565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH61_RS19580 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS19585 PF00005 ABC transporter CH61_RS19590 PF09335 SNARE associated Golgi protein CH61_RS19595 PF00136 DNA polymerase family B CH61_RS19595 PF03104 DNA polymerase family B, exonuclease domain CH61_RS19600 PF00271 Helicase conserved C-terminal domain CH61_RS19600 PF12137 RNA polymerase recycling family C-terminal CH61_RS19600 PF00176 SNF2 family N-terminal domain CH61_RS19600 PF18339 RapA N-terminal Tudor like domain 1 CH61_RS19600 PF18337 RapA N-terminal Tudor like domain CH61_RS19610 PF06761 Intracellular multiplication and human macrophage-killing CH61_RS19610 PF14331 ImcF-related N-terminal domain CH61_RS19610 PF06744 Type VI secretion protein IcmF C-terminal CH61_RS19615 PF05736 OprF membrane domain CH61_RS19615 PF00691 OmpA family CH61_RS19620 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH61_RS19655 PF06715 Gp5 C-terminal repeat (3 copies) CH61_RS19655 PF04717 Type VI secretion system, phage-baseplate injector CH61_RS19660 PF10431 C-terminal, D2-small domain, of ClpB protein CH61_RS19660 PF07724 AAA domain (Cdc48 subfamily) CH61_RS19660 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS19660 PF17871 AAA lid domain CH61_RS19670 PF05947 Type VI secretion system, TssF CH61_RS19685 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH61_RS19690 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH61_RS19705 PF00849 RNA pseudouridylate synthase CH61_RS19710 PF00226 DnaJ domain CH61_RS19710 PF05099 Tellurite resistance protein TerB CH61_RS19715 PF03968 OstA-like protein CH61_RS19715 PF04453 LPS transport system D CH61_RS19720 PF09312 SurA N-terminal domain CH61_RS19720 PF00639 PPIC-type PPIASE domain CH61_RS19725 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CH61_RS19730 PF00398 Ribosomal RNA adenine dimethylase CH61_RS19735 PF04379 ApaG domain CH61_RS19740 PF00149 Calcineurin-like phosphoesterase CH61_RS19755 PF01797 Transposase IS200 like CH61_RS19760 PF00186 Dihydrofolate reductase CH61_RS19765 PF12821 Threonine/Serine exporter, ThrE CH61_RS19770 PF06738 Putative threonine/serine exporter CH61_RS19775 PF01810 LysE type translocator CH61_RS19780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CH61_RS19780 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CH61_RS19780 PF02142 MGS-like domain CH61_RS19785 PF00117 Glutamine amidotransferase class-I CH61_RS19785 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CH61_RS19790 PF01113 Dihydrodipicolinate reductase, N-terminus CH61_RS19790 PF05173 Dihydrodipicolinate reductase, C-terminus CH61_RS19795 PF01797 Transposase IS200 like CH61_RS19805 PF01797 Transposase IS200 like CH61_RS19820 PF02401 LytB protein CH61_RS19825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH61_RS19830 PF01252 Signal peptidase (SPase) II CH61_RS19835 PF08264 Anticodon-binding domain of tRNA CH61_RS19835 PF00133 tRNA synthetases class I (I, L, M and V) CH61_RS19835 PF06827 Zinc finger found in FPG and IleRS CH61_RS19840 PF06574 FAD synthetase CH61_RS19840 PF01687 Riboflavin kinase CH61_RS19850 PF01649 Ribosomal protein S20 CH61_RS19855 PF03466 LysR substrate binding domain CH61_RS19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS19860 PF06965 Na+/H+ antiporter 1 CH61_RS19865 PF00684 DnaJ central domain CH61_RS19865 PF00226 DnaJ domain CH61_RS19865 PF01556 DnaJ C terminal domain CH61_RS19870 PF00012 Hsp70 protein CH61_RS19875 PF01184 GPR1/FUN34/yaaH family CH61_RS19885 PF07690 Major Facilitator Superfamily CH61_RS19890 PF00994 Probable molybdopterin binding domain CH61_RS19895 PF00923 Transaldolase/Fructose-6-phosphate aldolase CH61_RS19900 PF03883 Peroxide stress protein YaaA CH61_RS19905 PF00291 Pyridoxal-phosphate dependent enzyme CH61_RS19905 PF14821 Threonine synthase N terminus CH61_RS19910 PF00288 GHMP kinases N terminal domain CH61_RS19910 PF08544 GHMP kinases C terminal CH61_RS19915 PF03447 Homoserine dehydrogenase, NAD binding domain CH61_RS19915 PF00742 Homoserine dehydrogenase CH61_RS19915 PF00696 Amino acid kinase family CH61_RS19915 PF01842 ACT domain CH61_RS19915 PF13840 ACT domain CH61_RS19920 PF00486 Transcriptional regulatory protein, C terminal CH61_RS19920 PF00072 Response regulator receiver domain CH61_RS19925 PF05981 CreA protein CH61_RS19930 PF12833 Helix-turn-helix domain CH61_RS19930 PF06445 GyrI-like small molecule binding domain CH61_RS19935 PF00300 Histidine phosphatase superfamily (branch 1) CH61_RS19940 PF01931 Protein of unknown function DUF84 CH61_RS19945 PF01371 Trp repressor protein CH61_RS19950 PF14718 Soluble lytic murein transglycosylase L domain CH61_RS19950 PF01464 Transglycosylase SLT domain CH61_RS19955 PF00690 Cation transporter/ATPase, N-terminus CH61_RS19955 PF00689 Cation transporting ATPase, C-terminus CH61_RS19965 PF00990 Diguanylate cyclase, GGDEF domain CH61_RS19965 PF17152 Periplasmic sensor domain CH61_RS19970 PF00691 OmpA family CH61_RS19980 PF02661 Fic/DOC family CH61_RS19985 PF01381 Helix-turn-helix CH61_RS19985 PF13521 AAA domain CH61_RS19990 PF18073 Rubredoxin metal binding domain CH61_RS19995 PF18429 Domain of unknown function (DUF5609) CH61_RS20000 PF10144 Bacterial virulence factor haemolysin CH61_RS20005 PF01048 Phosphorylase superfamily CH61_RS20010 PF01676 Metalloenzyme superfamily CH61_RS20015 PF00591 Glycosyl transferase family, a/b domain CH61_RS20015 PF02885 Glycosyl transferase family, helical bundle domain CH61_RS20015 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CH61_RS20020 PF00591 Glycosyl transferase family, a/b domain CH61_RS20020 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CH61_RS20020 PF02885 Glycosyl transferase family, helical bundle domain CH61_RS20025 PF01791 DeoC/LacD family aldolase CH61_RS20030 PF07670 Nucleoside recognition CH61_RS20030 PF01773 Na+ dependent nucleoside transporter N-terminus CH61_RS20030 PF07662 Na+ dependent nucleoside transporter C-terminus CH61_RS20035 PF01026 TatD related DNase CH61_RS20040 PF01734 Patatin-like phospholipase CH61_RS20045 PF07043 Protein of unknown function (DUF1328) CH61_RS20050 PF04972 BON domain CH61_RS20055 PF00009 Elongation factor Tu GTP binding domain CH61_RS20055 PF03144 Elongation factor Tu domain 2 CH61_RS20055 PF16658 Class II release factor RF3, C-terminal domain CH61_RS20060 PF00583 Acetyltransferase (GNAT) family CH61_RS20065 PF03603 DNA polymerase III psi subunit CH61_RS20070 PF05175 Methyltransferase small domain CH61_RS20070 PF08468 Methyltransferase small domain N-terminal CH61_RS20080 PF07256 Protein of unknown function (DUF1435) CH61_RS20085 PF00990 Diguanylate cyclase, GGDEF domain CH61_RS20090 PF01095 Pectinesterase CH61_RS20110 PF00873 AcrB/AcrD/AcrF family CH61_RS20115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH61_RS20135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH61_RS20140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS20140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH61_RS20155 PF00005 ABC transporter CH61_RS20160 PF02653 Branched-chain amino acid transport system / permease component CH61_RS20165 PF02653 Branched-chain amino acid transport system / permease component CH61_RS20170 PF13407 Periplasmic binding protein domain CH61_RS20175 PF01791 DeoC/LacD family aldolase CH61_RS20180 PF03992 Antibiotic biosynthesis monooxygenase CH61_RS20185 PF10696 Protein of unknown function (DUF2501) CH61_RS20190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH61_RS20190 PF05524 PEP-utilising enzyme, N-terminal CH61_RS20190 PF00391 PEP-utilising enzyme, mobile domain CH61_RS20190 PF02896 PEP-utilising enzyme, TIM barrel domain CH61_RS20190 PF00381 PTS HPr component phosphorylation site CH61_RS20200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH61_RS20205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH61_RS20210 PF12833 Helix-turn-helix domain CH61_RS20220 PF05987 Bacterial protein of unknown function (DUF898) CH61_RS20245 PF00665 Integrase core domain CH61_RS20270 PF01555 DNA methylase CH61_RS20275 PF01527 Transposase CH61_RS20290 PF07728 AAA domain (dynein-related subfamily) CH61_RS20290 PF12102 Domain of unknown function (DUF3578) CH61_RS20300 PF00665 Integrase core domain CH61_RS20300 PF02796 Helix-turn-helix domain of resolvase CH61_RS20305 PF01695 IstB-like ATP binding protein CH61_RS20315 PF07338 Protein of unknown function (DUF1471) CH61_RS20320 PF18158 Adaptive response protein AidB N-terminal domain CH61_RS20320 PF02770 Acyl-CoA dehydrogenase, middle domain CH61_RS20320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CH61_RS20325 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH61_RS20325 PF00588 SpoU rRNA Methylase family CH61_RS20330 PF08206 Ribonuclease B OB domain CH61_RS20330 PF00773 RNB domain CH61_RS20330 PF17876 Cold shock domain CH61_RS20330 PF08461 Ribonuclease R winged-helix domain CH61_RS20330 PF00575 S1 RNA binding domain CH61_RS20335 PF02082 Transcriptional regulator CH61_RS20340 PF00709 Adenylosuccinate synthetase CH61_RS20345 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CH61_RS20350 PF01145 SPFH domain / Band 7 family CH61_RS20355 PF01145 SPFH domain / Band 7 family CH61_RS20355 PF12221 Bacterial membrane protein N terminal CH61_RS20360 PF13167 GTP-binding GTPase N-terminal CH61_RS20360 PF01926 50S ribosome-binding GTPase CH61_RS20360 PF16360 GTP-binding GTPase Middle Region CH61_RS20365 PF17209 Hfq protein CH61_RS20375 PF01119 DNA mismatch repair protein, C-terminal domain CH61_RS20375 PF08676 MutL C terminal dimerisation domain CH61_RS20380 PF01520 N-acetylmuramoyl-L-alanine amidase CH61_RS20385 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CH61_RS20390 PF01256 Carbohydrate kinase CH61_RS20390 PF03853 YjeF-related protein N-terminus CH61_RS20395 PF08331 Domain of unknown function (DUF1730) CH61_RS20410 PF00929 Exonuclease CH61_RS20420 PF03193 RsgA GTPase CH61_RS20425 PF02666 Phosphatidylserine decarboxylase CH61_RS20430 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH61_RS20430 PF00924 Mechanosensitive ion channel CH61_RS20430 PF12795 Mechanosensitive ion channel porin domain CH61_RS20435 PF00152 tRNA synthetases class II (D, K and N) CH61_RS20445 PF02910 Fumarate reductase flavoprotein C-term CH61_RS20445 PF00890 FAD binding domain CH61_RS20450 PF13183 4Fe-4S dicluster domain CH61_RS20450 PF13085 2Fe-2S iron-sulfur cluster binding domain CH61_RS20455 PF02300 Fumarate reductase subunit C CH61_RS20460 PF02313 Fumarate reductase subunit D CH61_RS20470 PF01797 Transposase IS200 like CH61_RS20475 PF00893 Small Multidrug Resistance protein CH61_RS20480 PF01132 Elongation factor P (EF-P) OB domain CH61_RS20480 PF09285 Elongation factor P, C-terminal CH61_RS20480 PF08207 Elongation factor P (EF-P) KOW-like domain CH61_RS20485 PF04055 Radical SAM superfamily CH61_RS20490 PF13698 Domain of unknown function (DUF4156) CH61_RS20495 PF00118 TCP-1/cpn60 chaperonin family CH61_RS20500 PF00166 Chaperonin 10 Kd subunit CH61_RS20505 PF04186 FxsA cytoplasmic membrane protein CH61_RS20510 PF00206 Lyase CH61_RS20510 PF10415 Fumarase C C-terminus CH61_RS20515 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH61_RS20520 PF03091 CutA1 divalent ion tolerance protein CH61_RS20525 PF02683 Cytochrome C biogenesis protein transmembrane region CH61_RS20525 PF11412 Disulphide bond corrector protein DsbC CH61_RS20530 PF00384 Molybdopterin oxidoreductase CH61_RS20530 PF01568 Molydopterin dinucleotide binding domain CH61_RS20530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH61_RS20535 PF13247 4Fe-4S dicluster domain CH61_RS20535 PF12800 4Fe-4S binding domain CH61_RS20540 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS20540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CH61_RS20540 PF13247 4Fe-4S dicluster domain CH61_RS20575 PF06379 L-rhamnose-proton symport protein (RhaT) CH61_RS20580 PF12833 Helix-turn-helix domain CH61_RS20580 PF02311 AraC-like ligand binding domain CH61_RS20585 PF02311 AraC-like ligand binding domain CH61_RS20585 PF12833 Helix-turn-helix domain CH61_RS20600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS20600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH61_RS20605 PF06134 L-rhamnose isomerase (RhaA) CH61_RS20610 PF00596 Class II Aldolase and Adducin N-terminal domain CH61_RS20615 PF00465 Iron-containing alcohol dehydrogenase CH61_RS20620 PF05336 L-rhamnose mutarotase CH61_RS20625 PF00436 Single-strand binding protein family CH61_RS20630 PF00005 ABC transporter CH61_RS20630 PF17760 UvrA interaction domain CH61_RS20630 PF17755 UvrA DNA-binding domain CH61_RS20635 PF04237 YjbR CH61_RS20640 PF00155 Aminotransferase class I and II CH61_RS20645 PF01168 Alanine racemase, N-terminal domain CH61_RS20645 PF00842 Alanine racemase, C-terminal domain CH61_RS20650 PF00772 DnaB-like helicase N terminal domain CH61_RS20650 PF03796 DnaB-like helicase C terminal domain CH61_RS20655 PF00107 Zinc-binding dehydrogenase CH61_RS20655 PF08240 Alcohol dehydrogenase GroES-like domain CH61_RS20660 PF09583 Phage shock protein G (Phageshock_PspG) CH61_RS20665 PF01207 Dihydrouridine synthase (Dus) CH61_RS20670 PF01475 Ferric uptake regulator family CH61_RS20675 PF00717 Peptidase S24-like CH61_RS20675 PF01726 LexA DNA binding domain CH61_RS20680 PF01219 Prokaryotic diacylglycerol kinase CH61_RS20685 PF01553 Acyltransferase CH61_RS20690 PF01040 UbiA prenyltransferase family CH61_RS20695 PF04345 Chorismate lyase CH61_RS20700 PF12951 Passenger-associated-transport-repeat CH61_RS20705 PF08031 Berberine and berberine like CH61_RS20705 PF01565 FAD binding domain CH61_RS20725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH61_RS20730 PF13953 PapC C-terminal domain CH61_RS20730 PF13954 PapC N-terminal domain CH61_RS20730 PF00577 Outer membrane usher protein CH61_RS20740 PF02342 TerD domain CH61_RS20745 PF02342 TerD domain CH61_RS20750 PF03741 Integral membrane protein TerC family CH61_RS20755 PF05099 Tellurite resistance protein TerB CH61_RS20760 PF02342 TerD domain CH61_RS20765 PF02342 TerD domain CH61_RS20785 PF11202 Phosphoribosyl transferase (PRTase) CH61_RS20785 PF15608 PELOTA RNA binding domain CH61_RS20805 PF04055 Radical SAM superfamily CH61_RS20810 PF06228 Haem utilisation ChuX/HutX CH61_RS20815 PF13460 NAD(P)H-binding CH61_RS20820 PF07715 TonB-dependent Receptor Plug Domain CH61_RS20820 PF00593 TonB dependent receptor CH61_RS20825 PF05171 Haemin-degrading HemS.ChuX domain CH61_RS20830 PF01497 Periplasmic binding protein CH61_RS20835 PF01032 FecCD transport family CH61_RS20840 PF00005 ABC transporter CH61_RS20845 PF01053 Cys/Met metabolism PLP-dependent enzyme CH61_RS20850 PF03222 Tryptophan/tyrosine permease family CH61_RS20855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS20855 PF03466 LysR substrate binding domain CH61_RS20860 PF01206 Sulfurtransferase TusA CH61_RS20865 PF04143 Sulphur transport CH61_RS20870 PF01312 FlhB HrpN YscU SpaS Family CH61_RS20875 PF01311 Bacterial export proteins, family 1 CH61_RS20880 PF01313 Bacterial export proteins, family 3 CH61_RS20885 PF00813 FliP family CH61_RS20890 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH61_RS20905 PF18269 T3SS EscN ATPase C-terminal domain CH61_RS20905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH61_RS20910 PF00771 FHIPEP family CH61_RS20925 PF01514 Secretory protein of YscJ/FliF family CH61_RS20945 PF14525 AraC-binding-like domain CH61_RS20945 PF12833 Helix-turn-helix domain CH61_RS20960 PF03958 Bacterial type II/III secretion system short domain CH61_RS20960 PF00263 Bacterial type II and III secretion system protein CH61_RS20965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CH61_RS20965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS20965 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS20965 PF00072 Response regulator receiver domain CH61_RS20965 PF00672 HAMP domain CH61_RS20965 PF01627 Hpt domain CH61_RS20970 PF00072 Response regulator receiver domain CH61_RS20970 PF00196 Bacterial regulatory proteins, luxR family CH61_RS20975 PF00375 Sodium:dicarboxylate symporter family CH61_RS20980 PF13193 AMP-binding enzyme C-terminal domain CH61_RS20980 PF00501 AMP-binding enzyme CH61_RS20980 PF16177 Acetyl-coenzyme A synthetase N-terminus CH61_RS20985 PF04341 Protein of unknown function, DUF485 CH61_RS20990 PF00474 Sodium:solute symporter family CH61_RS21000 PF00665 Integrase core domain CH61_RS21000 PF02796 Helix-turn-helix domain of resolvase CH61_RS21005 PF01695 IstB-like ATP binding protein CH61_RS21010 PF00132 Bacterial transferase hexapeptide (six repeats) CH61_RS21015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CH61_RS21015 PF01488 Shikimate / quinate 5-dehydrogenase CH61_RS21015 PF08501 Shikimate dehydrogenase substrate binding domain CH61_RS21020 PF01300 Telomere recombination CH61_RS21025 PF01396 Topoisomerase DNA binding C4 zinc finger CH61_RS21030 PF04361 Protein of unknown function (DUF494) CH61_RS21035 PF17782 DprA winged helix domain CH61_RS21035 PF02481 DNA recombination-mediator protein A CH61_RS21040 PF01327 Polypeptide deformylase CH61_RS21045 PF02911 Formyl transferase, C-terminal domain CH61_RS21045 PF00551 Formyl transferase CH61_RS21050 PF01029 NusB family CH61_RS21050 PF01189 16S rRNA methyltransferase RsmB/F CH61_RS21055 PF02080 TrkA-C domain CH61_RS21055 PF02254 TrkA-N domain CH61_RS21060 PF01741 Large-conductance mechanosensitive channel, MscL CH61_RS21065 PF03889 Alternative ribosome-rescue factor A CH61_RS21070 PF13411 MerR HTH family regulatory protein CH61_RS21075 PF01196 Ribosomal protein L17 CH61_RS21080 PF01000 RNA polymerase Rpb3/RpoA insert domain CH61_RS21080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CH61_RS21080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CH61_RS21085 PF01479 S4 domain CH61_RS21085 PF00163 Ribosomal protein S4/S9 N-terminal domain CH61_RS21090 PF00411 Ribosomal protein S11 CH61_RS21095 PF00416 Ribosomal protein S13/S18 CH61_RS21100 PF00444 Ribosomal protein L36 CH61_RS21105 PF00344 SecY translocase CH61_RS21110 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CH61_RS21115 PF00327 Ribosomal protein L30p/L7e CH61_RS21120 PF03719 Ribosomal protein S5, C-terminal domain CH61_RS21120 PF00333 Ribosomal protein S5, N-terminal domain CH61_RS21125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CH61_RS21130 PF00347 Ribosomal protein L6 CH61_RS21135 PF00410 Ribosomal protein S8 CH61_RS21140 PF00253 Ribosomal protein S14p/S29e CH61_RS21145 PF00281 Ribosomal protein L5 CH61_RS21145 PF00673 ribosomal L5P family C-terminus CH61_RS21150 PF00467 KOW motif CH61_RS21150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CH61_RS21155 PF00238 Ribosomal protein L14p/L23e CH61_RS21160 PF00366 Ribosomal protein S17 CH61_RS21165 PF00831 Ribosomal L29 protein CH61_RS21170 PF00252 Ribosomal protein L16p/L10e CH61_RS21175 PF00189 Ribosomal protein S3, C-terminal domain CH61_RS21175 PF07650 KH domain CH61_RS21180 PF00237 Ribosomal protein L22p/L17e CH61_RS21185 PF00203 Ribosomal protein S19 CH61_RS21190 PF03947 Ribosomal Proteins L2, C-terminal domain CH61_RS21190 PF00181 Ribosomal Proteins L2, RNA binding domain CH61_RS21195 PF00276 Ribosomal protein L23 CH61_RS21200 PF00573 Ribosomal protein L4/L1 family CH61_RS21205 PF00297 Ribosomal protein L3 CH61_RS21210 PF00338 Ribosomal protein S10p/S20e CH61_RS21215 PF00210 Ferritin-like domain CH61_RS21220 PF04324 BFD-like [2Fe-2S] binding domain CH61_RS21225 PF01797 Transposase IS200 like CH61_RS21230 PF03144 Elongation factor Tu domain 2 CH61_RS21230 PF00009 Elongation factor Tu GTP binding domain CH61_RS21230 PF03143 Elongation factor Tu C-terminal domain CH61_RS21235 PF03144 Elongation factor Tu domain 2 CH61_RS21235 PF03764 Elongation factor G, domain IV CH61_RS21235 PF14492 Elongation Factor G, domain II CH61_RS21235 PF00679 Elongation factor G C-terminus CH61_RS21235 PF00009 Elongation factor Tu GTP binding domain CH61_RS21240 PF00177 Ribosomal protein S7p/S5e CH61_RS21245 PF00164 Ribosomal protein S12/S23 CH61_RS21250 PF04077 DsrH like protein CH61_RS21255 PF02635 DsrE/DsrF-like family CH61_RS21260 PF02635 DsrE/DsrF-like family CH61_RS21265 PF08348 YheO-like PAS domain CH61_RS21265 PF13309 HTH domain CH61_RS21270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CH61_RS21270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH61_RS21275 PF04102 SlyX CH61_RS21280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH61_RS21285 PF09526 Probable metal-binding protein (DUF2387) CH61_RS21290 PF02254 TrkA-N domain CH61_RS21290 PF00999 Sodium/hydrogen exchanger family CH61_RS21295 PF02525 Flavodoxin-like fold CH61_RS21305 PF00535 Glycosyl transferase family 2 CH61_RS21315 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CH61_RS21320 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS21325 PF00005 ABC transporter CH61_RS21330 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH61_RS21335 PF01810 LysE type translocator CH61_RS21340 PF00561 alpha/beta hydrolase fold CH61_RS21345 PF06794 Uncharacterised protein family (UPF0270) CH61_RS21350 PF00485 Phosphoribulokinase / Uridine kinase family CH61_RS21360 PF02566 OsmC-like protein CH61_RS21365 PF13545 Crp-like helix-turn-helix domain CH61_RS21365 PF00027 Cyclic nucleotide-binding domain CH61_RS21370 PF12805 FUSC-like inner membrane protein yccS CH61_RS21375 PF00202 Aminotransferase class-III CH61_RS21380 PF00117 Glutamine amidotransferase class-I CH61_RS21385 PF05872 Bacterial protein of unknown function (DUF853) CH61_RS21395 PF02056 Family 4 glycosyl hydrolase CH61_RS21395 PF11975 Family 4 glycosyl hydrolase C-terminal domain CH61_RS21400 PF00356 Bacterial regulatory proteins, lacI family CH61_RS21410 PF07690 Major Facilitator Superfamily CH61_RS21415 PF07969 Amidohydrolase family CH61_RS21420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CH61_RS21420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CH61_RS21420 PF18267 Rubredoxin NAD+ reductase C-terminal domain CH61_RS21420 PF04324 BFD-like [2Fe-2S] binding domain CH61_RS21420 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH61_RS21425 PF13806 Rieske-like [2Fe-2S] domain CH61_RS21430 PF01226 Formate/nitrite transporter CH61_RS21435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH61_RS21435 PF14824 Sirohaem biosynthesis protein central CH61_RS21435 PF10414 Sirohaem synthase dimerisation region CH61_RS21440 PF00579 tRNA synthetases class I (W and Y) CH61_RS21445 PF13419 Haloacid dehalogenase-like hydrolase CH61_RS21450 PF00834 Ribulose-phosphate 3 epimerase family CH61_RS21455 PF02086 D12 class N6 adenine-specific DNA methyltransferase CH61_RS21460 PF05036 Sporulation related domain CH61_RS21465 PF01761 3-dehydroquinate synthase CH61_RS21470 PF01202 Shikimate kinase CH61_RS21475 PF00263 Bacterial type II and III secretion system protein CH61_RS21475 PF03958 Bacterial type II/III secretion system short domain CH61_RS21505 PF00912 Transglycosylase CH61_RS21505 PF17092 Penicillin-binding protein OB-like domain CH61_RS21505 PF00905 Penicillin binding protein transpeptidase domain CH61_RS21510 PF00293 NUDIX domain CH61_RS21520 PF07095 Intracellular growth attenuator protein IgaA CH61_RS21525 PF13419 Haloacid dehalogenase-like hydrolase CH61_RS21530 PF01479 S4 domain CH61_RS21535 PF01430 Hsp33 protein CH61_RS21540 PF01293 Phosphoenolpyruvate carboxykinase CH61_RS21545 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS21545 PF00672 HAMP domain CH61_RS21545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS21550 PF00486 Transcriptional regulatory protein, C terminal CH61_RS21550 PF00072 Response regulator receiver domain CH61_RS21555 PF03449 Transcription elongation factor, N-terminal CH61_RS21555 PF01272 Transcription elongation factor, GreA/GreB, C-term CH61_RS21560 PF17674 HHH domain CH61_RS21560 PF16921 Tex protein YqgF-like domain CH61_RS21560 PF09371 Tex-like protein N-terminal domain CH61_RS21560 PF00575 S1 RNA binding domain CH61_RS21570 PF04023 FeoA domain CH61_RS21575 PF17910 FeoB cytosolic helical domain CH61_RS21575 PF07664 Ferrous iron transport protein B C terminus CH61_RS21575 PF02421 Ferrous iron transport protein B CH61_RS21575 PF07670 Nucleoside recognition CH61_RS21580 PF09012 FeoC like transcriptional regulator CH61_RS21585 PF07338 Protein of unknown function (DUF1471) CH61_RS21590 PF00561 alpha/beta hydrolase fold CH61_RS21595 PF00156 Phosphoribosyl transferase domain CH61_RS21600 PF01106 NifU-like domain CH61_RS21600 PF01521 Iron-sulphur cluster biosynthesis CH61_RS21605 PF02446 4-alpha-glucanotransferase CH61_RS21610 PF00343 Carbohydrate phosphorylase CH61_RS21615 PF00343 Carbohydrate phosphorylase CH61_RS21620 PF17874 MalT-like TPR region CH61_RS21620 PF00196 Bacterial regulatory proteins, luxR family CH61_RS21625 PF00581 Rhodanese-like domain CH61_RS21630 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CH61_RS21630 PF01694 Rhomboid family CH61_RS21635 PF00455 DeoR C terminal sensor domain CH61_RS21635 PF08220 DeoR-like helix-turn-helix domain CH61_RS21645 PF13276 HTH-like domain CH61_RS21645 PF00665 Integrase core domain CH61_RS21645 PF13333 Integrase core domain CH61_RS21650 PF02219 Methylenetetrahydrofolate reductase CH61_RS21655 PF00742 Homoserine dehydrogenase CH61_RS21655 PF03447 Homoserine dehydrogenase, NAD binding domain CH61_RS21655 PF00696 Amino acid kinase family CH61_RS21665 PF01340 Met Apo-repressor, MetJ CH61_RS21675 PF05360 yiaA/B two helix domain CH61_RS21680 PF01197 Ribosomal protein L31 CH61_RS21685 PF00270 DEAD/DEAH box helicase CH61_RS21685 PF18074 Primosomal protein N C-terminal domain CH61_RS21685 PF17764 3′ DNA-binding domain (3′BD) CH61_RS21685 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CH61_RS21685 PF00271 Helicase conserved C-terminal domain CH61_RS21695 PF00356 Bacterial regulatory proteins, lacI family CH61_RS21700 PF05036 Sporulation related domain CH61_RS21705 PF00227 Proteasome subunit CH61_RS21710 PF10431 C-terminal, D2-small domain, of ClpB protein CH61_RS21710 PF07724 AAA domain (Cdc48 subfamily) CH61_RS21710 PF00004 ATPase family associated with various cellular activities (AAA) CH61_RS21715 PF01040 UbiA prenyltransferase family CH61_RS21720 PF03737 Aldolase/RraA CH61_RS21740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH61_RS21740 PF00529 HlyD membrane-fusion protein of T1SS CH61_RS21745 PF00664 ABC transporter transmembrane region CH61_RS21745 PF03412 Peptidase C39 family CH61_RS21745 PF00005 ABC transporter CH61_RS21750 PF00665 Integrase core domain CH61_RS21750 PF02796 Helix-turn-helix domain of resolvase CH61_RS21755 PF01695 IstB-like ATP binding protein CH61_RS21760 PF00664 ABC transporter transmembrane region CH61_RS21760 PF03412 Peptidase C39 family CH61_RS21760 PF00005 ABC transporter CH61_RS21765 PF01797 Transposase IS200 like CH61_RS21770 PF06005 Cell division protein ZapB CH61_RS21780 PF00230 Major intrinsic protein CH61_RS21785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH61_RS21785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH61_RS21790 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CH61_RS21795 PF00175 Oxidoreductase NAD-binding domain CH61_RS21795 PF00970 Oxidoreductase FAD-binding domain CH61_RS21800 PF05656 Protein of unknown function (DUF805) CH61_RS21805 PF07305 Protein of unknown function (DUF1454) CH61_RS21810 PF00121 Triosephosphate isomerase CH61_RS21815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH61_RS21815 PF03466 LysR substrate binding domain CH61_RS21820 PF02585 GlcNAc-PI de-N-acetylase CH61_RS21825 PF03737 Aldolase/RraA CH61_RS21830 PF00939 Sodium:sulfate symporter transmembrane region CH61_RS21845 PF00365 Phosphofructokinase CH61_RS21850 PF01545 Cation efflux family CH61_RS21850 PF16916 Dimerisation domain of Zinc Transporter CH61_RS21855 PF04754 Putative transposase, YhgA-like CH61_RS21860 PF07813 LTXXQ motif family protein CH61_RS21865 PF00486 Transcriptional regulatory protein, C terminal CH61_RS21865 PF00072 Response regulator receiver domain CH61_RS21870 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS21870 PF16527 Two-component sensor protein CpxA, periplasmic domain CH61_RS21870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS21870 PF00672 HAMP domain CH61_RS21875 PF02805 Metal binding domain of Ada CH61_RS21875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH61_RS21875 PF12833 Helix-turn-helix domain CH61_RS21875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CH61_RS21880 PF00588 SpoU rRNA Methylase family CH61_RS21885 PF06426 Serine acetyltransferase, N-terminal CH61_RS21885 PF00132 Bacterial transferase hexapeptide (six repeats) CH61_RS21895 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CH61_RS21895 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CH61_RS21900 PF02556 Preprotein translocase subunit SecB CH61_RS21905 PF00462 Glutaredoxin CH61_RS21910 PF00581 Rhodanese-like domain CH61_RS21915 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CH61_RS21915 PF01676 Metalloenzyme superfamily CH61_RS21920 PF01551 Peptidase family M23 CH61_RS21930 PF08240 Alcohol dehydrogenase GroES-like domain CH61_RS21930 PF00107 Zinc-binding dehydrogenase CH61_RS21935 PF00155 Aminotransferase class I and II CH61_RS21940 PF01370 NAD dependent epimerase/dehydratase family CH61_RS21945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH61_RS21950 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH61_RS21955 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CH61_RS21960 PF00535 Glycosyl transferase family 2 CH61_RS21965 PF01467 Cytidylyltransferase-like CH61_RS21970 PF06827 Zinc finger found in FPG and IleRS CH61_RS21970 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CH61_RS21970 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CH61_RS21975 PF00471 Ribosomal protein L33 CH61_RS21980 PF00830 Ribosomal L28 family CH61_RS21985 PF04002 RadC-like JAB domain CH61_RS21990 PF04127 DNA / pantothenate metabolism flavoprotein CH61_RS21990 PF02441 Flavoprotein CH61_RS21995 PF00692 dUTPase CH61_RS22000 PF00440 Bacterial regulatory proteins, tetR family CH61_RS22005 PF00156 Phosphoribosyl transferase domain CH61_RS22010 PF03725 3' exoribonuclease family, domain 2 CH61_RS22010 PF01138 3' exoribonuclease family, domain 1 CH61_RS22015 PF03755 YicC-like family, N-terminal region CH61_RS22015 PF08340 Domain of unknown function (DUF1732) CH61_RS22020 PF03458 UPF0126 domain CH61_RS22025 PF01653 NAD-dependent DNA ligase adenylation domain CH61_RS22025 PF03120 NAD-dependent DNA ligase OB-fold domain CH61_RS22030 PF00625 Guanylate kinase CH61_RS22035 PF01192 RNA polymerase Rpb6 CH61_RS22040 PF13291 ACT domain CH61_RS22040 PF04607 Region found in RelA / SpoT proteins CH61_RS22040 PF02824 TGS domain CH61_RS22045 PF00588 SpoU rRNA Methylase family CH61_RS22045 PF12105 SpoU, rRNA methylase, C-terminal CH61_RS22050 PF00271 Helicase conserved C-terminal domain CH61_RS22050 PF00270 DEAD/DEAH box helicase CH61_RS22050 PF17191 RecG wedge domain CH61_RS22055 PF03616 Sodium/glutamate symporter CH61_RS22060 PF00860 Permease family CH61_RS22065 PF05170 AsmA family CH61_RS22070 PF00583 Acetyltransferase (GNAT) family CH61_RS22070 PF09500 Putative thioesterase (yiiD_Cterm) CH61_RS22075 PF00665 Integrase core domain CH61_RS22075 PF02796 Helix-turn-helix domain of resolvase CH61_RS22080 PF01695 IstB-like ATP binding protein CH61_RS22085 PF02580 D-Tyr-tRNA(Tyr) deacylase CH61_RS22090 PF03631 Virulence factor BrkB CH61_RS22095 PF13419 Haloacid dehalogenase-like hydrolase CH61_RS22100 PF00009 Elongation factor Tu GTP binding domain CH61_RS22100 PF03144 Elongation factor Tu domain 2 CH61_RS22100 PF00679 Elongation factor G C-terminus CH61_RS22110 PF03951 Glutamine synthetase, beta-Grasp domain CH61_RS22110 PF00120 Glutamine synthetase, catalytic domain CH61_RS22115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH61_RS22115 PF00512 His Kinase A (phospho-acceptor) domain CH61_RS22115 PF00989 PAS fold CH61_RS22120 PF00072 Response regulator receiver domain CH61_RS22120 PF00158 Sigma-54 interaction domain CH61_RS22120 PF02954 Bacterial regulatory protein, Fis family CH61_RS22125 PF04055 Radical SAM superfamily CH61_RS22125 PF06969 HemN C-terminal domain CH61_RS22130 PF04220 Der GTPase activator (YihI) CH61_RS22135 PF01926 50S ribosome-binding GTPase CH61_RS22140 PF01797 Transposase IS200 like CH61_RS22150 PF01367 5'-3' exonuclease, C-terminal SAM fold CH61_RS22150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH61_RS22150 PF00476 DNA polymerase family A CH61_RS22150 PF01612 3'-5' exonuclease CH61_RS22155 PF01323 DSBA-like thioredoxin domain CH61_RS22160 PF01636 Phosphotransferase enzyme family CH61_RS22165 PF06288 Protein of unknown function (DUF1040) CH61_RS22170 PF12804 MobA-like NTP transferase domain CH61_RS22175 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CH61_RS22210 PF07729 FCD domain CH61_RS22210 PF00392 Bacterial regulatory proteins, gntR family CH61_RS22215 PF07690 Major Facilitator Superfamily CH61_RS22225 PF00294 pfkB family carbohydrate kinase CH61_RS22230 PF05025 RbsD / FucU transport protein family CH61_RS22235 PF02705 K+ potassium transporter CH61_RS22240 PF12592 Protein of unknown function (DUF3763) CH61_RS22240 PF07728 AAA domain (dynein-related subfamily) CH61_RS22240 PF17868 AAA lid domain CH61_RS22245 PF05762 VWA domain containing CoxE-like protein CH61_RS22250 PF03590 Aspartate-ammonia ligase CH61_RS22255 PF01037 Lrp/AsnC ligand binding domain CH61_RS22260 PF00258 Flavodoxin CH61_RS22265 PF01134 Glucose inhibited division protein A CH61_RS22265 PF13932 GidA associated domain CH61_RS22270 PF02527 rRNA small subunit methyltransferase G CH61_RS22275 PF03899 ATP synthase I chain CH61_RS22280 PF00119 ATP synthase A chain CH61_RS22285 PF00137 ATP synthase subunit C CH61_RS22290 PF00430 ATP synthase B/B' CF(0) CH61_RS22295 PF00213 ATP synthase delta (OSCP) subunit CH61_RS22300 PF00306 ATP synthase alpha/beta chain, C terminal domain CH61_RS22300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH61_RS22300 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH61_RS22305 PF00231 ATP synthase CH61_RS22310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH61_RS22310 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH61_RS22315 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CH61_RS22315 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CH61_RS22320 PF00132 Bacterial transferase hexapeptide (six repeats) CH61_RS22320 PF12804 MobA-like NTP transferase domain CH61_RS22325 PF01380 SIS domain CH61_RS22330 PF12849 PBP superfamily domain CH61_RS22335 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS22340 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS22345 PF00005 ABC transporter CH61_RS22350 PF01895 PhoU domain CH61_RS22360 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH61_RS22365 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS22370 PF00528 Binding-protein-dependent transport system inner membrane component CH61_RS22375 PF13419 Haloacid dehalogenase-like hydrolase CH61_RS22380 PF00860 Permease family