CH55_RS00245 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS01110 SM00855 Phosphoglycerate mutase family CH55_RS01120 SM00463 Small MutS-related domain CH55_RS01160 SM00825 Beta-ketoacyl synthase CH55_RS01190 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS01200 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH55_RS01245 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS01260 SM00382 ATPases associated with a variety of cellular activities CH55_RS01270 SM00052 Putative diguanylate phosphodiesterase CH55_RS01305 SM00354 helix_turn _helix lactose operon repressor CH55_RS01350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH55_RS01390 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CH55_RS01395 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH55_RS01395 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CH55_RS01460 SM00354 helix_turn _helix lactose operon repressor CH55_RS01530 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH55_RS01555 SM00382 ATPases associated with a variety of cellular activities CH55_RS01575 SM00382 ATPases associated with a variety of cellular activities CH55_RS01585 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS01585 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH55_RS01635 SM00829 Enoylreductase CH55_RS01645 SM00382 ATPases associated with a variety of cellular activities CH55_RS01655 SM00354 helix_turn _helix lactose operon repressor CH55_RS01665 SM01329 CH55_RS01665 CH55_RS01745 SM00382 ATPases associated with a variety of cellular activities CH55_RS01755 SM00354 helix_turn _helix lactose operon repressor CH55_RS01855 SM00421 helix_turn_helix, Lux Regulon CH55_RS01885 SM00450 Rhodanese Homology Domain CH55_RS01895 SM00421 helix_turn_helix, Lux Regulon CH55_RS01940 SM00316 Ribosomal protein S1-like RNA-binding domain CH55_RS01945 SM00363 S4 RNA-binding domain CH55_RS01975 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CH55_RS01980 SM00822 CH55_RS01980 CH55_RS01990 SM00825 Beta-ketoacyl synthase CH55_RS02030 SM01321 CH55_RS02030 CH55_RS02095 SM00487 DEAD-like helicases superfamily CH55_RS02095 SM00490 helicase superfamily c-terminal domain CH55_RS02095 SM00982 CH55_RS02095 CH55_RS02095 SM01058 CarD-like/TRCF domain CH55_RS02105 SM00382 ATPases associated with a variety of cellular activities CH55_RS02130 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CH55_RS02135 SM00387 Histidine kinase-like ATPases CH55_RS02135 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS02140 SM00448 cheY-homologous receiver domain CH55_RS02140 SM00862 Transcriptional regulatory protein, C terminal CH55_RS02175 SM01329 CH55_RS02175 CH55_RS02180 SM00354 helix_turn _helix lactose operon repressor CH55_RS02190 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH55_RS02190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH55_RS02225 SM00344 helix_turn_helix ASNC type CH55_RS02235 SM00829 Enoylreductase CH55_RS02240 SM01038 Beta galactosidase small chain CH55_RS02245 SM00357 Cold shock protein domain CH55_RS02295 SM00073 Histidine Phosphotransfer domain CH55_RS02295 SM00260 Two component signalling adaptor domain CH55_RS02295 SM00387 Histidine kinase-like ATPases CH55_RS02295 SM01231 CH55_RS02295 CH55_RS02300 SM00260 Two component signalling adaptor domain CH55_RS02340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH55_RS02340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS02340 SM00319 Homologues of the ligand binding domain of Tar CH55_RS02345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH55_RS02345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS02345 SM00319 Homologues of the ligand binding domain of Tar CH55_RS02350 SM00138 Methyltransferase, chemotaxis proteins CH55_RS02355 SM00448 cheY-homologous receiver domain CH55_RS02360 SM00448 cheY-homologous receiver domain CH55_RS02375 SM00644 CH55_RS02375 CH55_RS02395 SM01005 Alanine racemase, C-terminal domain CH55_RS02420 SM00382 ATPases associated with a variety of cellular activities CH55_RS02460 SM00382 ATPases associated with a variety of cellular activities CH55_RS02465 SM00382 ATPases associated with a variety of cellular activities CH55_RS02485 SM00155 Phospholipase D. Active site motifs. CH55_RS02555 SM00749 bacterial OsmY and nodulation domain CH55_RS02600 SM00481 DNA polymerase alpha chain like domain CH55_RS02610 SM00363 S4 RNA-binding domain CH55_RS02620 SM00822 CH55_RS02620 CH55_RS02640 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CH55_RS02640 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CH55_RS02640 SM00493 CH55_RS02640 CH55_RS02665 SM00014 Acid phosphatase homologues CH55_RS02675 SM00028 Tetratricopeptide repeats CH55_RS02685 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CH55_RS02725 SM00357 Cold shock protein domain CH55_RS02725 SM00955 CH55_RS02725 CH55_RS02740 SM00478 endonuclease III CH55_RS02740 SM00525 CH55_RS02740 CH55_RS02750 SM00900 CH55_RS02750 CH55_RS02760 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS02805 SM00382 ATPases associated with a variety of cellular activities CH55_RS02825 SM00382 ATPases associated with a variety of cellular activities CH55_RS02835 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS02905 SM00354 helix_turn _helix lactose operon repressor CH55_RS02930 SM00382 ATPases associated with a variety of cellular activities CH55_RS02985 SM00098 Alkaline phosphatase homologues CH55_RS02995 SM00100 Cyclic nucleotide-monophosphate binding domain CH55_RS02995 SM00419 helix_turn_helix, cAMP Regulatory protein CH55_RS03010 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CH55_RS03010 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CH55_RS03035 SM00448 cheY-homologous receiver domain CH55_RS03035 SM00862 Transcriptional regulatory protein, C terminal CH55_RS03040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS03040 SM00387 Histidine kinase-like ATPases CH55_RS03040 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS03050 SM01321 CH55_RS03050 CH55_RS03090 SM00020 Trypsin-like serine protease CH55_RS03095 SM00530 Helix-turn-helix XRE-family like proteins CH55_RS03105 SM00382 ATPases associated with a variety of cellular activities CH55_RS03105 SM00487 DEAD-like helicases superfamily CH55_RS03105 SM00490 helicase superfamily c-terminal domain CH55_RS03105 SM00847 Helicase associated domain (HA2) Add an annotation CH55_RS03165 SM00890 Domain of unknown function CH55_RS03180 SM00422 helix_turn_helix, mercury resistance CH55_RS03200 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH55_RS03210 SM01321 CH55_RS03210 CH55_RS03215 SM00091 PAS domain CH55_RS03215 SM00382 ATPases associated with a variety of cellular activities CH55_RS03225 SM00953 CH55_RS03225 CH55_RS03260 SM00382 ATPases associated with a variety of cellular activities CH55_RS03295 SM00382 ATPases associated with a variety of cellular activities CH55_RS03300 SM00382 ATPases associated with a variety of cellular activities CH55_RS03335 SM00363 S4 RNA-binding domain CH55_RS03360 SM00347 helix_turn_helix multiple antibiotic resistance protein CH55_RS03390 SM00479 CH55_RS03390 CH55_RS03465 SM01321 CH55_RS03465 CH55_RS03505 SM00382 ATPases associated with a variety of cellular activities CH55_RS03605 SM00382 ATPases associated with a variety of cellular activities CH55_RS03625 SM00411 bacterial (prokaryotic) histone like domain CH55_RS03630 SM00873 B3/4 domain CH55_RS03630 SM00874 tRNA synthetase B5 domain CH55_RS03630 SM00896 Ferredoxin-fold anticodon binding domain CH55_RS03655 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CH55_RS03690 SM00382 ATPases associated with a variety of cellular activities CH55_RS03760 SM00382 ATPases associated with a variety of cellular activities CH55_RS03785 SM00644 CH55_RS03785 CH55_RS03790 SM00346 helix_turn_helix isocitrate lyase regulation CH55_RS03835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH55_RS03835 SM00245 tail specific protease CH55_RS03840 SM00945 ProQ/FINO family CH55_RS03860 SM00972 Spore Coat Protein U domain CH55_RS03865 SM00972 Spore Coat Protein U domain CH55_RS03870 SM00972 Spore Coat Protein U domain CH55_RS03885 SM00972 Spore Coat Protein U domain CH55_RS03895 SM01022 CH55_RS03895 CH55_RS03905 SM00382 ATPases associated with a variety of cellular activities CH55_RS03915 SM00528 Domain in histone-like proteins of HNS family CH55_RS03920 SM00984 UDP binding domain CH55_RS03925 SM00448 cheY-homologous receiver domain CH55_RS03970 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CH55_RS03970 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CH55_RS03970 SM00493 CH55_RS03970 CH55_RS03990 SM00870 CH55_RS03990 CH55_RS04010 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH55_RS04025 SM00763 PrkA AAA domain CH55_RS04065 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS04125 SM00060 Fibronectin type 3 domain CH55_RS04155 SM01040 BRO family, N-terminal domain CH55_RS04175 SM00232 JAB/MPN domain CH55_RS04205 SM00635 Bacterial Ig-like domain 2 CH55_RS04235 SM00635 Bacterial Ig-like domain 2 CH55_RS04315 SM01040 BRO family, N-terminal domain CH55_RS04350 SM00382 ATPases associated with a variety of cellular activities CH55_RS04405 SM00341 Helicase and RNase D C-terminal CH55_RS04405 SM00474 3'-5' exonuclease CH55_RS04425 SM00487 DEAD-like helicases superfamily CH55_RS04425 SM00491 CH55_RS04425 CH55_RS04475 SM00257 Lysin motif CH55_RS04485 SM00382 ATPases associated with a variety of cellular activities CH55_RS04495 SM00382 ATPases associated with a variety of cellular activities CH55_RS04500 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH55_RS04555 SM00836 DALR anticodon binding domain CH55_RS04555 SM01016 Arginyl tRNA synthetase N terminal dom CH55_RS04605 SM00481 DNA polymerase alpha chain like domain CH55_RS04625 SM00382 ATPases associated with a variety of cellular activities CH55_RS04685 SM00937 CH55_RS04685 CH55_RS04710 SM01400 CH55_RS04710 CH55_RS04745 SM00450 Rhodanese Homology Domain CH55_RS04780 SM00448 cheY-homologous receiver domain CH55_RS04780 SM00862 Transcriptional regulatory protein, C terminal CH55_RS04785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS04785 SM00387 Histidine kinase-like ATPases CH55_RS04785 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS04840 SM00671 Sel1-like repeats. CH55_RS04845 SM00671 Sel1-like repeats. CH55_RS04925 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS04925 SM00866 CH55_RS04925 CH55_RS04940 SM00382 ATPases associated with a variety of cellular activities CH55_RS04975 SM00382 ATPases associated with a variety of cellular activities CH55_RS05005 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS05005 SM00866 CH55_RS05005 CH55_RS05140 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH55_RS05140 SM00465 GIY-YIG type nucleases (URI domain) CH55_RS05145 SM00421 helix_turn_helix, Lux Regulon CH55_RS05145 SM00448 cheY-homologous receiver domain CH55_RS05235 SM00382 ATPases associated with a variety of cellular activities CH55_RS05245 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS05245 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH55_RS05290 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS05305 SM00478 endonuclease III CH55_RS05340 SM00382 ATPases associated with a variety of cellular activities CH55_RS05410 SM00382 ATPases associated with a variety of cellular activities CH55_RS05425 SM01007 Class II Aldolase and Adducin N-terminal domain CH55_RS05445 SM00047 Lysozyme subfamily 2 CH55_RS05490 SM00858 CH55_RS05490 CH55_RS05505 SM00634 Bacterial Ig-like domain (group 1) CH55_RS05510 SM01321 CH55_RS05510 CH55_RS05590 SM01022 CH55_RS05590 CH55_RS05600 SM00487 DEAD-like helicases superfamily CH55_RS05600 SM00490 helicase superfamily c-terminal domain CH55_RS05630 SM00903 Flavin reductase like domain CH55_RS05680 SM00347 helix_turn_helix multiple antibiotic resistance protein CH55_RS05685 SM01091 Transporter associated domain CH55_RS05740 SM00357 Cold shock protein domain CH55_RS05795 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS05805 SM00382 ATPases associated with a variety of cellular activities CH55_RS05810 SM00090 RIO-like kinase CH55_RS05835 SM00382 ATPases associated with a variety of cellular activities CH55_RS05845 SM00354 helix_turn _helix lactose operon repressor CH55_RS05890 SM00421 helix_turn_helix, Lux Regulon CH55_RS05890 SM00448 cheY-homologous receiver domain CH55_RS05935 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH55_RS05960 SM00634 Bacterial Ig-like domain (group 1) CH55_RS06000 SM00382 ATPases associated with a variety of cellular activities CH55_RS06005 SM00382 ATPases associated with a variety of cellular activities CH55_RS06065 SM01350 CH55_RS06065 CH55_RS06105 SM00382 ATPases associated with a variety of cellular activities CH55_RS06115 SM01006 Siderophore biosynthesis protein domain CH55_RS06135 SM01091 Transporter associated domain CH55_RS06165 SM01321 CH55_RS06165 CH55_RS06210 SM00919 Malic enzyme, NAD binding domain CH55_RS06210 SM01274 CH55_RS06210 CH55_RS06225 SM00382 ATPases associated with a variety of cellular activities CH55_RS06255 SM00829 Enoylreductase CH55_RS06285 SM00382 ATPases associated with a variety of cellular activities CH55_RS06295 SM00852 Probable molybdopterin binding domain CH55_RS06315 SM00382 ATPases associated with a variety of cellular activities CH55_RS06410 SM00382 ATPases associated with a variety of cellular activities CH55_RS06410 SM01086 C-terminal, D2-small domain, of ClpB protein CH55_RS06450 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CH55_RS06490 SM00825 Beta-ketoacyl synthase CH55_RS06550 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CH55_RS06555 SM00992 Hemimethylated DNA-binding protein YccV like CH55_RS06560 SM00881 CoA binding domain CH55_RS06570 SM00851 MGS-like domain CH55_RS06610 SM01321 CH55_RS06610 CH55_RS06655 SM00825 Beta-ketoacyl synthase CH55_RS06660 SM01321 CH55_RS06660 CH55_RS06695 SM00382 ATPases associated with a variety of cellular activities CH55_RS06700 SM00981 CH55_RS06700 CH55_RS06745 SM00849 Metallo-beta-lactamase superfamily CH55_RS06760 SM01321 CH55_RS06760 CH55_RS06810 SM00357 Cold shock protein domain CH55_RS06815 SM01150 CH55_RS06815 CH55_RS06825 SM00382 ATPases associated with a variety of cellular activities CH55_RS06835 SM00411 bacterial (prokaryotic) histone like domain CH55_RS06840 SM00316 Ribosomal protein S1-like RNA-binding domain CH55_RS06870 SM00870 CH55_RS06870 CH55_RS06910 SM00382 ATPases associated with a variety of cellular activities CH55_RS06925 SM00382 ATPases associated with a variety of cellular activities CH55_RS06935 SM00843 CH55_RS06935 CH55_RS06940 SM00344 helix_turn_helix ASNC type CH55_RS06955 SM00382 ATPases associated with a variety of cellular activities CH55_RS06960 SM00382 ATPases associated with a variety of cellular activities CH55_RS06970 SM00316 Ribosomal protein S1-like RNA-binding domain CH55_RS06975 SM01321 CH55_RS06975 CH55_RS06980 SM00382 ATPases associated with a variety of cellular activities CH55_RS06980 SM01086 C-terminal, D2-small domain, of ClpB protein CH55_RS06990 SM00357 Cold shock protein domain CH55_RS06995 SM00382 ATPases associated with a variety of cellular activities CH55_RS07055 SM00830 Chorismate mutase type II CH55_RS07060 SM00382 ATPases associated with a variety of cellular activities CH55_RS07065 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS07065 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH55_RS07100 SM00382 ATPases associated with a variety of cellular activities CH55_RS07115 SM00244 prohibitin homologues CH55_RS07130 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS07130 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH55_RS07155 SM00382 ATPases associated with a variety of cellular activities CH55_RS07195 SM00014 Acid phosphatase homologues CH55_RS07200 SM01133 CH55_RS07200 CH55_RS07205 SM00420 helix_turn_helix, Deoxyribose operon repressor CH55_RS07205 SM01134 CH55_RS07205 CH55_RS07220 SM00936 Penicillin-binding protein 5, C-terminal domain CH55_RS07230 SM00382 ATPases associated with a variety of cellular activities CH55_RS07230 SM00930 CH55_RS07230 CH55_RS07260 SM00382 ATPases associated with a variety of cellular activities CH55_RS07290 SM00518 AP endonuclease family 2 CH55_RS07315 SM00862 Transcriptional regulatory protein, C terminal CH55_RS07345 SM00382 ATPases associated with a variety of cellular activities CH55_RS07395 SM00841 Elongation factor P, C-terminal CH55_RS07395 SM01185 CH55_RS07395 CH55_RS07410 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS07410 SM00895 CH55_RS07410 CH55_RS07420 SM00833 Cobalamin synthesis protein cobW C-terminal domain CH55_RS07425 SM00014 Acid phosphatase homologues CH55_RS07435 SM00052 Putative diguanylate phosphodiesterase CH55_RS07455 SM00382 ATPases associated with a variety of cellular activities CH55_RS07470 SM00363 S4 RNA-binding domain CH55_RS07475 SM00487 DEAD-like helicases superfamily CH55_RS07475 SM00490 helicase superfamily c-terminal domain CH55_RS07630 SM00420 helix_turn_helix, Deoxyribose operon repressor CH55_RS07630 SM01134 CH55_RS07630 CH55_RS07650 SM00530 Helix-turn-helix XRE-family like proteins CH55_RS07665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH55_RS07665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS07700 SM01321 CH55_RS07700 CH55_RS07730 SM00421 helix_turn_helix, Lux Regulon CH55_RS07730 SM00448 cheY-homologous receiver domain CH55_RS07735 SM00387 Histidine kinase-like ATPases CH55_RS07735 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS07735 SM00448 cheY-homologous receiver domain CH55_RS07745 SM00434 DNA Topoisomerase IV CH55_RS07775 SM00852 Probable molybdopterin binding domain CH55_RS07790 SM01060 CH55_RS07790 CH55_RS07795 SM00487 DEAD-like helicases superfamily CH55_RS07795 SM00488 CH55_RS07795 CH55_RS07795 SM00491 CH55_RS07795 CH55_RS07830 SM00382 ATPases associated with a variety of cellular activities CH55_RS07850 SM00450 Rhodanese Homology Domain CH55_RS07865 SM00382 ATPases associated with a variety of cellular activities CH55_RS07910 SM00382 ATPases associated with a variety of cellular activities CH55_RS07925 SM00507 HNH nucleases CH55_RS07930 SM01118 CH55_RS07930 CH55_RS07960 SM01321 CH55_RS07960 CH55_RS07970 SM00490 helicase superfamily c-terminal domain CH55_RS08015 SM01321 CH55_RS08015 CH55_RS08035 SM00116 Domain in cystathionine beta-synthase and other proteins. CH55_RS08035 SM01240 CH55_RS08035 CH55_RS08060 SM00564 beta-propeller repeat CH55_RS08080 SM00530 Helix-turn-helix XRE-family like proteins CH55_RS08085 SM00028 Tetratricopeptide repeats CH55_RS08095 SM00562 CH55_RS08095 CH55_RS08100 SM00247 Beta/gamma crystallins CH55_RS08150 SM00271 DnaJ molecular chaperone homology domain CH55_RS08185 SM01321 CH55_RS08185 CH55_RS08240 SM00938 Nitrogen regulatory protein P-II CH55_RS08250 SM00382 ATPases associated with a variety of cellular activities CH55_RS08250 SM00448 cheY-homologous receiver domain CH55_RS08260 SM00387 Histidine kinase-like ATPases CH55_RS08260 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS08265 SM01321 CH55_RS08265 CH55_RS08285 SM01211 CH55_RS08285 CH55_RS08290 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS08320 SM01321 CH55_RS08320 CH55_RS08350 SM00358 Double-stranded RNA binding motif CH55_RS08350 SM00535 Ribonuclease III family CH55_RS08400 SM00487 DEAD-like helicases superfamily CH55_RS08400 SM00490 helicase superfamily c-terminal domain CH55_RS08405 SM00248 ankyrin repeats CH55_RS08425 SM00986 Uracil DNA glycosylase superfamily CH55_RS08425 SM00987 UreE urease accessory protein, C-terminal domain CH55_RS08450 SM00797 Allophanate hydrolase subunit 2 CH55_RS08510 SM00387 Histidine kinase-like ATPases CH55_RS08510 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS08515 SM00448 cheY-homologous receiver domain CH55_RS08515 SM00862 Transcriptional regulatory protein, C terminal CH55_RS08560 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS08635 SM00988 UreE urease accessory protein, N-terminal domain CH55_RS08655 SM00382 ATPases associated with a variety of cellular activities CH55_RS08660 SM00382 ATPases associated with a variety of cellular activities CH55_RS08680 SM00357 Cold shock protein domain CH55_RS08725 SM00382 ATPases associated with a variety of cellular activities CH55_RS08820 SM01321 CH55_RS08820 CH55_RS08895 SM00729 Elongator protein 3, MiaB family, Radical SAM CH55_RS08910 SM00116 Domain in cystathionine beta-synthase and other proteins. CH55_RS08910 SM01091 Transporter associated domain CH55_RS08920 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS08935 SM00382 ATPases associated with a variety of cellular activities CH55_RS09005 SM00729 Elongator protein 3, MiaB family, Radical SAM CH55_RS09025 SM00357 Cold shock protein domain CH55_RS09035 SM00421 helix_turn_helix, Lux Regulon CH55_RS09060 SM00382 ATPases associated with a variety of cellular activities CH55_RS09095 SM00382 ATPases associated with a variety of cellular activities CH55_RS09130 SM01359 CH55_RS09130 CH55_RS09130 SM01360 CH55_RS09130 CH55_RS09190 SM00869 Autotransporter beta-domain CH55_RS09220 SM01217 CH55_RS09220 CH55_RS09280 SM00195 Dual specificity phosphatase, catalytic domain CH55_RS09280 SM00404 Protein tyrosine phosphatase, catalytic domain motif CH55_RS09290 SM00563 Phosphate acyltransferases CH55_RS09355 SM01321 CH55_RS09355 CH55_RS09365 SM00840 CH55_RS09365 CH55_RS09380 SM01001 AIR carboxylase CH55_RS09395 SM00382 ATPases associated with a variety of cellular activities CH55_RS09405 SM00822 CH55_RS09405 CH55_RS09415 SM00244 prohibitin homologues CH55_RS09425 SM00422 helix_turn_helix, mercury resistance CH55_RS09580 SM00387 Histidine kinase-like ATPases CH55_RS09585 SM00493 CH55_RS09585 CH55_RS09595 SM00382 ATPases associated with a variety of cellular activities CH55_RS09690 SM00938 Nitrogen regulatory protein P-II CH55_RS09695 SM00382 ATPases associated with a variety of cellular activities CH55_RS09700 SM00382 ATPases associated with a variety of cellular activities CH55_RS09705 SM00344 helix_turn_helix ASNC type CH55_RS09745 SM00411 bacterial (prokaryotic) histone like domain CH55_RS09750 SM00382 ATPases associated with a variety of cellular activities CH55_RS09750 SM00464 Found in ATP-dependent protease La (LON) CH55_RS09755 SM00382 ATPases associated with a variety of cellular activities CH55_RS09755 SM00994 ClpX C4-type zinc finger CH55_RS09755 SM01086 C-terminal, D2-small domain, of ClpB protein CH55_RS09840 SM00981 CH55_RS09840 CH55_RS09860 SM00861 Transketolase, pyrimidine binding domain CH55_RS09865 SM01321 CH55_RS09865 CH55_RS09915 SM01321 CH55_RS09915 CH55_RS09930 SM01323 CH55_RS09930 CH55_RS09975 SM00642 Alpha-amylase domain CH55_RS09995 SM00091 PAS domain CH55_RS09995 SM00387 Histidine kinase-like ATPases CH55_RS09995 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS10000 SM00448 cheY-homologous receiver domain CH55_RS10000 SM00862 Transcriptional regulatory protein, C terminal CH55_RS10025 SM00382 ATPases associated with a variety of cellular activities CH55_RS10080 SM01321 CH55_RS10080 CH55_RS10090 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CH55_RS10115 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CH55_RS10120 SM01321 CH55_RS10120 CH55_RS10175 SM00900 CH55_RS10175 CH55_RS10220 SM00710 Parallel beta-helix repeats CH55_RS10220 SM00912 haemagglutination activity domain CH55_RS10240 SM00382 ATPases associated with a variety of cellular activities CH55_RS10255 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS10300 SM00347 helix_turn_helix multiple antibiotic resistance protein CH55_RS10315 SM00967 RNA 2'-O ribose methyltransferase substrate binding CH55_RS10325 SM01144 CH55_RS10325 CH55_RS10330 SM00881 CoA binding domain CH55_RS10335 SM00155 Phospholipase D. Active site motifs. CH55_RS10375 SM00382 ATPases associated with a variety of cellular activities CH55_RS10375 SM01086 C-terminal, D2-small domain, of ClpB protein CH55_RS10385 SM00363 S4 RNA-binding domain CH55_RS10400 SM01321 CH55_RS10400 CH55_RS10410 SM00830 Chorismate mutase type II CH55_RS10420 SM00382 ATPases associated with a variety of cellular activities CH55_RS10430 SM00830 Chorismate mutase type II CH55_RS10440 SM00448 cheY-homologous receiver domain CH55_RS10440 SM00850 LytTr DNA-binding domain CH55_RS10495 SM00382 ATPases associated with a variety of cellular activities CH55_RS10495 SM00962 SRP54-type protein, GTPase domain CH55_RS10495 SM00963 SRP54-type protein, helical bundle domain CH55_RS10505 SM01091 Transporter associated domain CH55_RS10510 SM01321 CH55_RS10510 CH55_RS10565 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CH55_RS10575 SM00382 ATPases associated with a variety of cellular activities CH55_RS10605 SM00861 Transketolase, pyrimidine binding domain CH55_RS10620 SM00382 ATPases associated with a variety of cellular activities CH55_RS10665 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH55_RS10670 SM01007 Class II Aldolase and Adducin N-terminal domain CH55_RS10675 SM00420 helix_turn_helix, Deoxyribose operon repressor CH55_RS10675 SM01134 CH55_RS10675 CH55_RS10685 SM01321 CH55_RS10685 CH55_RS10690 SM00382 ATPases associated with a variety of cellular activities CH55_RS10745 SM01235 CH55_RS10745 CH55_RS10750 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS10765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CH55_RS10780 SM01120 CH55_RS10780 CH55_RS10795 SM00829 Enoylreductase CH55_RS10810 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CH55_RS10810 SM00534 ATPase domain of DNA mismatch repair MUTS family CH55_RS10820 SM00257 Lysin motif CH55_RS10925 SM01192 CH55_RS10925 CH55_RS10925 SM01193 CH55_RS10925 CH55_RS10945 SM00954 Region found in RelA / SpoT proteins CH55_RS10950 SM00073 Histidine Phosphotransfer domain CH55_RS10950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS10950 SM00387 Histidine kinase-like ATPases CH55_RS10950 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS10950 SM00448 cheY-homologous receiver domain CH55_RS10955 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH55_RS10960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH55_RS11010 SM00382 ATPases associated with a variety of cellular activities CH55_RS11020 SM00487 DEAD-like helicases superfamily CH55_RS11020 SM00490 helicase superfamily c-terminal domain CH55_RS11020 SM00847 Helicase associated domain (HA2) Add an annotation CH55_RS11080 SM00382 ATPases associated with a variety of cellular activities CH55_RS11085 SM00947 Carbonic anhydrase CH55_RS11130 SM01321 CH55_RS11130 CH55_RS11155 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS11155 SM00895 CH55_RS11155 CH55_RS11170 SM00644 CH55_RS11170 CH55_RS11195 SM01240 CH55_RS11195 CH55_RS11220 SM01321 CH55_RS11220 CH55_RS11230 SM00382 ATPases associated with a variety of cellular activities CH55_RS11315 SM00382 ATPases associated with a variety of cellular activities CH55_RS11320 SM00382 ATPases associated with a variety of cellular activities CH55_RS11335 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS11335 SM00866 CH55_RS11335 CH55_RS11360 SM00382 ATPases associated with a variety of cellular activities CH55_RS11365 SM00382 ATPases associated with a variety of cellular activities CH55_RS11375 SM00072 Guanylate kinase homologues. CH55_RS11380 SM00849 Metallo-beta-lactamase superfamily CH55_RS11385 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH55_RS11400 SM00382 ATPases associated with a variety of cellular activities CH55_RS11480 SM00530 Helix-turn-helix XRE-family like proteins CH55_RS11495 SM00487 DEAD-like helicases superfamily CH55_RS11495 SM00490 helicase superfamily c-terminal domain CH55_RS11500 SM00028 Tetratricopeptide repeats CH55_RS11505 SM00316 Ribosomal protein S1-like RNA-binding domain CH55_RS11505 SM00322 K homology RNA-binding domain CH55_RS11525 SM00862 Transcriptional regulatory protein, C terminal CH55_RS11595 SM00858 CH55_RS11595 CH55_RS11615 SM00382 ATPases associated with a variety of cellular activities CH55_RS11640 SM00382 ATPases associated with a variety of cellular activities CH55_RS11710 SM01321 CH55_RS11710 CH55_RS11800 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS11830 SM00563 Phosphate acyltransferases CH55_RS11835 SM00434 DNA Topoisomerase IV CH55_RS11855 SM00387 Histidine kinase-like ATPases CH55_RS11855 SM00433 TopoisomeraseII CH55_RS11935 SM01118 CH55_RS11935 CH55_RS11940 SM00287 Bacterial SH3 domain homologues CH55_RS11945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH55_RS11955 SM00905 Dihydroneopterin aldolase CH55_RS11960 SM01207 CH55_RS11960 CH55_RS11975 SM00400 zinc finger CH55_RS11975 SM00493 CH55_RS11975 CH55_RS11975 SM00766 DNA primase DnaG DnaB-binding CH55_RS12115 SM01217 CH55_RS12115 CH55_RS12140 SM00354 helix_turn _helix lactose operon repressor CH55_RS12150 SM00382 ATPases associated with a variety of cellular activities CH55_RS12165 SM00869 Autotransporter beta-domain CH55_RS12210 SM00327 von Willebrand factor (vWF) type A domain CH55_RS12220 SM00327 von Willebrand factor (vWF) type A domain CH55_RS12225 SM00327 von Willebrand factor (vWF) type A domain CH55_RS12235 SM00220 Serine/Threonine protein kinases, catalytic domain CH55_RS12285 SM01321 CH55_RS12285 CH55_RS12310 SM00650 Ribosomal RNA adenine dimethylases CH55_RS12330 SM00271 DnaJ molecular chaperone homology domain CH55_RS12380 SM00382 ATPases associated with a variety of cellular activities CH55_RS12380 SM01086 C-terminal, D2-small domain, of ClpB protein CH55_RS12435 SM00487 DEAD-like helicases superfamily CH55_RS12435 SM00490 helicase superfamily c-terminal domain CH55_RS12440 SM00486 DNA polymerase type-B family CH55_RS12450 SM00382 ATPases associated with a variety of cellular activities CH55_RS12495 SM01329 CH55_RS12495 CH55_RS12500 SM00917 LeuA allosteric (dimerisation) domain CH55_RS12545 SM01321 CH55_RS12545 CH55_RS12555 SM00354 helix_turn _helix lactose operon repressor CH55_RS12630 SM00842 Cell division protein FtsA CH55_RS12635 SM00864 Tubulin/FtsZ family, GTPase domain CH55_RS12635 SM00865 Tubulin/FtsZ family, C-terminal domain CH55_RS12655 SM00957 SecA DEAD-like domain CH55_RS12655 SM00958 SecA preprotein cross-linking domain CH55_RS12665 SM00382 ATPases associated with a variety of cellular activities CH55_RS12725 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS12725 SM00895 CH55_RS12725 CH55_RS12750 SM00858 CH55_RS12750 CH55_RS12760 SM01321 CH55_RS12760 CH55_RS12790 SM00851 MGS-like domain CH55_RS12790 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CH55_RS12795 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CH55_RS12805 SM01321 CH55_RS12805 CH55_RS12840 SM00904 Riboflavin kinase CH55_RS12865 SM00271 DnaJ molecular chaperone homology domain CH55_RS12890 SM00852 Probable molybdopterin binding domain CH55_RS12920 SM00448 cheY-homologous receiver domain CH55_RS12920 SM00862 Transcriptional regulatory protein, C terminal CH55_RS12930 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS12930 SM00871 Bacterial transcription activator, effector binding domain CH55_RS12935 SM00855 Phosphoglycerate mutase family CH55_RS12955 SM00831 Cation transporter/ATPase, N-terminus CH55_RS12965 SM00267 diguanylate cyclase CH55_RS12985 SM00530 Helix-turn-helix XRE-family like proteins CH55_RS12990 SM00382 ATPases associated with a variety of cellular activities CH55_RS13015 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CH55_RS13025 SM01133 CH55_RS13025 CH55_RS13050 SM00749 bacterial OsmY and nodulation domain CH55_RS13085 SM00267 diguanylate cyclase CH55_RS13155 SM00382 ATPases associated with a variety of cellular activities CH55_RS13175 SM01133 CH55_RS13175 CH55_RS13210 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS13290 SM00382 ATPases associated with a variety of cellular activities CH55_RS13335 SM01230 CH55_RS13335 CH55_RS13340 SM00091 PAS domain CH55_RS13340 SM00387 Histidine kinase-like ATPases CH55_RS13340 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS13345 SM00382 ATPases associated with a variety of cellular activities CH55_RS13345 SM00448 cheY-homologous receiver domain CH55_RS13350 SM00729 Elongator protein 3, MiaB family, Radical SAM CH55_RS13365 SM01321 CH55_RS13365 CH55_RS13375 SM01321 CH55_RS13375 CH55_RS13385 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CH55_RS13385 SM00474 3'-5' exonuclease CH55_RS13385 SM00475 5'-3' exonuclease CH55_RS13385 SM00482 DNA polymerase A domain CH55_RS13495 SM00749 bacterial OsmY and nodulation domain CH55_RS13515 SM00073 Histidine Phosphotransfer domain CH55_RS13515 SM00091 PAS domain CH55_RS13515 SM00387 Histidine kinase-like ATPases CH55_RS13515 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS13515 SM00448 cheY-homologous receiver domain CH55_RS13525 SM00729 Elongator protein 3, MiaB family, Radical SAM CH55_RS13580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH55_RS13585 SM01321 CH55_RS13585 CH55_RS13590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH55_RS13625 SM00382 ATPases associated with a variety of cellular activities CH55_RS13635 SM00116 Domain in cystathionine beta-synthase and other proteins. CH55_RS13655 SM00382 ATPases associated with a variety of cellular activities CH55_RS13705 SM00354 helix_turn _helix lactose operon repressor CH55_RS13715 SM00642 Alpha-amylase domain CH55_RS13855 SM00316 Ribosomal protein S1-like RNA-binding domain CH55_RS13880 SM00052 Putative diguanylate phosphodiesterase CH55_RS13880 SM00267 diguanylate cyclase CH55_RS13885 SM00829 Enoylreductase CH55_RS13910 SM00878 Biotin carboxylase C-terminal domain CH55_RS13950 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS13950 SM00895 CH55_RS13950 CH55_RS13970 SM00849 Metallo-beta-lactamase superfamily CH55_RS13985 SM00357 Cold shock protein domain CH55_RS13990 SM00357 Cold shock protein domain CH55_RS13995 SM01321 CH55_RS13995 CH55_RS14040 SM00382 ATPases associated with a variety of cellular activities CH55_RS14075 SM00382 ATPases associated with a variety of cellular activities CH55_RS14090 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS14100 SM01133 CH55_RS14100 CH55_RS14115 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS14155 SM00530 Helix-turn-helix XRE-family like proteins CH55_RS14170 SM00860 SMI1 / KNR4 family CH55_RS14225 SM00382 ATPases associated with a variety of cellular activities CH55_RS14225 SM01086 C-terminal, D2-small domain, of ClpB protein CH55_RS14305 SM00642 Alpha-amylase domain CH55_RS14310 SM00642 Alpha-amylase domain CH55_RS14320 SM00257 Lysin motif CH55_RS14320 SM00634 Bacterial Ig-like domain (group 1) CH55_RS14345 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH55_RS14380 SM00354 helix_turn _helix lactose operon repressor CH55_RS14395 SM00448 cheY-homologous receiver domain CH55_RS14395 SM00862 Transcriptional regulatory protein, C terminal CH55_RS14425 SM00382 ATPases associated with a variety of cellular activities CH55_RS14430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS14430 SM00387 Histidine kinase-like ATPases CH55_RS14430 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS14430 SM00448 cheY-homologous receiver domain CH55_RS14465 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CH55_RS14470 SM00235 Zinc-dependent metalloprotease CH55_RS14525 SM00869 Autotransporter beta-domain CH55_RS14545 SM00052 Putative diguanylate phosphodiesterase CH55_RS14585 SM00052 Putative diguanylate phosphodiesterase CH55_RS14585 SM00267 diguanylate cyclase CH55_RS14595 SM00382 ATPases associated with a variety of cellular activities CH55_RS14600 SM00382 ATPases associated with a variety of cellular activities CH55_RS14630 SM00912 haemagglutination activity domain CH55_RS14635 SM01321 CH55_RS14635 CH55_RS14655 SM00387 Histidine kinase-like ATPases CH55_RS14660 SM00421 helix_turn_helix, Lux Regulon CH55_RS14660 SM00448 cheY-homologous receiver domain CH55_RS14730 SM00382 ATPases associated with a variety of cellular activities CH55_RS14745 SM00530 Helix-turn-helix XRE-family like proteins CH55_RS14775 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS14785 SM00382 ATPases associated with a variety of cellular activities CH55_RS14915 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH55_RS14930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH55_RS14930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS14930 SM01358 CH55_RS14930 CH55_RS15005 SM00642 Alpha-amylase domain CH55_RS15075 SM00387 Histidine kinase-like ATPases CH55_RS15075 SM00433 TopoisomeraseII CH55_RS15090 SM00480 DNA polymerase III beta subunit CH55_RS15095 SM00382 ATPases associated with a variety of cellular activities CH55_RS15095 SM00760 Bacterial dnaA protein helix-turn-helix domain CH55_RS15155 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS15170 SM00382 ATPases associated with a variety of cellular activities CH55_RS15205 SM00382 ATPases associated with a variety of cellular activities CH55_RS15250 SM01228 CH55_RS15250 CH55_RS15260 SM00344 helix_turn_helix ASNC type CH55_RS15270 SM00327 von Willebrand factor (vWF) type A domain CH55_RS15275 SM00382 ATPases associated with a variety of cellular activities CH55_RS15305 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS15305 SM00895 CH55_RS15305 CH55_RS15375 SM00346 helix_turn_helix isocitrate lyase regulation CH55_RS15380 SM01018 B12 binding domain CH55_RS15385 SM00912 haemagglutination activity domain CH55_RS15430 SM00382 ATPases associated with a variety of cellular activities CH55_RS15505 SM00420 helix_turn_helix, Deoxyribose operon repressor CH55_RS15505 SM01134 CH55_RS15505 CH55_RS15515 SM00450 Rhodanese Homology Domain CH55_RS15520 SM00421 helix_turn_helix, Lux Regulon CH55_RS15570 SM00899 CH55_RS15570 CH55_RS15580 SM00316 Ribosomal protein S1-like RNA-binding domain CH55_RS15580 SM00732 Likely ribonuclease with RNase H fold. CH55_RS15590 SM00448 cheY-homologous receiver domain CH55_RS15590 SM00862 Transcriptional regulatory protein, C terminal CH55_RS15595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS15595 SM00387 Histidine kinase-like ATPases CH55_RS15595 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS15610 SM00363 S4 RNA-binding domain CH55_RS15740 SM00354 helix_turn _helix lactose operon repressor CH55_RS15775 SM00100 Cyclic nucleotide-monophosphate binding domain CH55_RS15775 SM00419 helix_turn_helix, cAMP Regulatory protein CH55_RS15810 SM00062 Bacterial periplasmic substrate-binding proteins CH55_RS15815 SM00382 ATPases associated with a variety of cellular activities CH55_RS15905 SM00838 Elongation factor G C-terminus CH55_RS15905 SM00889 Elongation factor G, domain IV CH55_RS15915 SM01321 CH55_RS15915 CH55_RS15930 SM01403 CH55_RS15930 CH55_RS15950 SM01382 CH55_RS15950 CH55_RS15950 SM01383 CH55_RS15950 CH55_RS15965 SM00322 K homology RNA-binding domain CH55_RS15985 SM01374 CH55_RS15985 CH55_RS15990 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH55_RS16055 SM00363 S4 RNA-binding domain CH55_RS16055 SM01390 CH55_RS16055 CH55_RS16060 SM00662 RNA polymerases D CH55_RS16070 SM00422 helix_turn_helix, mercury resistance CH55_RS16175 SM00487 DEAD-like helicases superfamily CH55_RS16175 SM00490 helicase superfamily c-terminal domain CH55_RS16185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH55_RS16185 SM00954 Region found in RelA / SpoT proteins CH55_RS16190 SM01409 CH55_RS16190 CH55_RS16195 SM00072 Guanylate kinase homologues. CH55_RS16255 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CH55_RS16255 SM01232 CH55_RS16255 CH55_RS16295 SM00829 Enoylreductase CH55_RS16315 SM00450 Rhodanese Homology Domain CH55_RS16340 SM00971 Serine acetyltransferase, N-terminal CH55_RS16350 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS16355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS16355 SM00387 Histidine kinase-like ATPases CH55_RS16355 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS16360 SM00448 cheY-homologous receiver domain CH55_RS16360 SM00862 Transcriptional regulatory protein, C terminal CH55_RS16460 SM01321 CH55_RS16460 CH55_RS16465 SM00382 ATPases associated with a variety of cellular activities CH55_RS16500 SM00382 ATPases associated with a variety of cellular activities CH55_RS16500 SM01086 C-terminal, D2-small domain, of ClpB protein CH55_RS16515 SM00354 helix_turn _helix lactose operon repressor CH55_RS16525 SM00487 DEAD-like helicases superfamily CH55_RS16525 SM00490 helicase superfamily c-terminal domain CH55_RS16585 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH55_RS16615 SM00382 ATPases associated with a variety of cellular activities CH55_RS16720 SM00382 ATPases associated with a variety of cellular activities CH55_RS16745 SM00382 ATPases associated with a variety of cellular activities CH55_RS16825 SM00507 HNH nucleases CH55_RS16905 SM00487 DEAD-like helicases superfamily CH55_RS16905 SM00490 helicase superfamily c-terminal domain CH55_RS16915 SM00357 Cold shock protein domain CH55_RS16915 SM00382 ATPases associated with a variety of cellular activities CH55_RS16915 SM00959 Rho termination factor, N-terminal domain CH55_RS16935 SM00984 UDP binding domain CH55_RS17005 SM01321 CH55_RS17005 CH55_RS17040 SM01219 CH55_RS17040 CH55_RS17110 SM00341 Helicase and RNase D C-terminal CH55_RS17110 SM00487 DEAD-like helicases superfamily CH55_RS17110 SM00490 helicase superfamily c-terminal domain CH55_RS17110 SM00956 CH55_RS17110 CH55_RS17215 SM00382 ATPases associated with a variety of cellular activities CH55_RS17215 SM00962 SRP54-type protein, GTPase domain CH55_RS17215 SM00963 SRP54-type protein, helical bundle domain CH55_RS17220 SM00382 ATPases associated with a variety of cellular activities CH55_RS17240 SM01321 CH55_RS17240 CH55_RS17265 SM00382 ATPases associated with a variety of cellular activities CH55_RS17270 SM00382 ATPases associated with a variety of cellular activities CH55_RS17325 SM00382 ATPases associated with a variety of cellular activities CH55_RS17425 SM00382 ATPases associated with a variety of cellular activities CH55_RS17435 SM01004 Delta-aminolevulinic acid dehydratase CH55_RS17440 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CH55_RS17440 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH55_RS17475 SM01321 CH55_RS17475 CH55_RS17550 SM00382 ATPases associated with a variety of cellular activities CH55_RS17585 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CH55_RS17585 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH55_RS17590 SM00649 Ribosomal protein L11/L12 CH55_RS17615 SM00663 RNA polymerase I subunit A N-terminus CH55_RS17635 SM00876 Biotin and Thiamin Synthesis associated domain CH55_RS17700 SM00411 bacterial (prokaryotic) histone like domain CH55_RS17710 SM01209 CH55_RS17710 CH55_RS17710 SM01210 CH55_RS17710 CH55_RS17715 SM00798 AICARFT/IMPCHase bienzyme CH55_RS17715 SM00851 MGS-like domain CH55_RS17770 SM00823 Phosphopantetheine attachment site CH55_RS17770 SM00825 Beta-ketoacyl synthase CH55_RS17790 SM00364 Leucine-rich repeats, bacterial type CH55_RS17790 SM00369 Leucine-rich repeats, typical (most populated) subfamily CH55_RS17795 SM00364 Leucine-rich repeats, bacterial type CH55_RS17800 SM00364 Leucine-rich repeats, bacterial type CH55_RS17805 SM00869 Autotransporter beta-domain CH55_RS17850 SM01387 CH55_RS17850 CH55_RS17870 SM00316 Ribosomal protein S1-like RNA-binding domain CH55_RS17870 SM00322 K homology RNA-binding domain CH55_RS17905 SM00382 ATPases associated with a variety of cellular activities CH55_RS17915 SM01103 CH55_RS17915 CH55_RS17930 SM00448 cheY-homologous receiver domain CH55_RS17930 SM00862 Transcriptional regulatory protein, C terminal CH55_RS17935 SM00387 Histidine kinase-like ATPases CH55_RS17935 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS18030 SM00116 Domain in cystathionine beta-synthase and other proteins. CH55_RS18030 SM01091 Transporter associated domain CH55_RS18075 SM01321 CH55_RS18075 CH55_RS18120 SM00382 ATPases associated with a variety of cellular activities CH55_RS18135 SM00967 RNA 2'-O ribose methyltransferase substrate binding CH55_RS18140 SM00316 Ribosomal protein S1-like RNA-binding domain CH55_RS18140 SM00357 Cold shock protein domain CH55_RS18140 SM00955 CH55_RS18140 CH55_RS18150 SM00788 Adenylosuccinate synthetase CH55_RS18160 SM00244 prohibitin homologues CH55_RS18165 SM00244 prohibitin homologues CH55_RS18185 SM00853 MutL C terminal dimerisation domain CH55_RS18185 SM01340 CH55_RS18185 CH55_RS18190 SM00257 Lysin motif CH55_RS18190 SM00646 CH55_RS18190 CH55_RS18225 SM00479 CH55_RS18225 CH55_RS18285 SM00841 Elongation factor P, C-terminal CH55_RS18285 SM01185 CH55_RS18285 CH55_RS18305 SM00883 Chaperonin 10 Kd subunit CH55_RS18335 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH55_RS18360 SM01276 CH55_RS18360 CH55_RS18385 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS18390 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS18415 SM01007 Class II Aldolase and Adducin N-terminal domain CH55_RS18450 SM01005 Alanine racemase, C-terminal domain CH55_RS18455 SM00382 ATPases associated with a variety of cellular activities CH55_RS18460 SM00829 Enoylreductase CH55_RS18490 SM00563 Phosphate acyltransferases CH55_RS18505 SM00869 Autotransporter beta-domain CH55_RS18510 SM00060 Fibronectin type 3 domain CH55_RS18610 SM00729 Elongator protein 3, MiaB family, Radical SAM CH55_RS18645 SM00382 ATPases associated with a variety of cellular activities CH55_RS18710 SM00382 ATPases associated with a variety of cellular activities CH55_RS18750 SM00342 helix_turn_helix, arabinose operon control protein CH55_RS18770 SM00387 Histidine kinase-like ATPases CH55_RS18770 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS18770 SM00448 cheY-homologous receiver domain CH55_RS18775 SM00421 helix_turn_helix, Lux Regulon CH55_RS18775 SM00448 cheY-homologous receiver domain CH55_RS18810 SM00382 ATPases associated with a variety of cellular activities CH55_RS18855 SM00382 ATPases associated with a variety of cellular activities CH55_RS18860 SM00382 ATPases associated with a variety of cellular activities CH55_RS18885 SM00869 Autotransporter beta-domain CH55_RS18890 SM00869 Autotransporter beta-domain CH55_RS18925 SM00354 helix_turn _helix lactose operon repressor CH55_RS18965 SM01006 Siderophore biosynthesis protein domain CH55_RS18995 SM00421 helix_turn_helix, Lux Regulon CH55_RS19060 SM00382 ATPases associated with a variety of cellular activities CH55_RS19060 SM01086 C-terminal, D2-small domain, of ClpB protein CH55_RS19145 SM00382 ATPases associated with a variety of cellular activities CH55_RS19175 SM00478 endonuclease III CH55_RS19175 SM00525 CH55_RS19175 CH55_RS19210 SM00729 Elongator protein 3, MiaB family, Radical SAM CH55_RS19220 SM01152 CH55_RS19220 CH55_RS19240 SM00382 ATPases associated with a variety of cellular activities CH55_RS19255 SM00732 Likely ribonuclease with RNase H fold. CH55_RS19280 SM00731 SprT homologues. CH55_RS19305 SM00861 Transketolase, pyrimidine binding domain CH55_RS19310 SM01321 CH55_RS19310 CH55_RS19315 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH55_RS19380 SM01011 Aminopeptidase P, N-terminal domain CH55_RS19455 SM00448 cheY-homologous receiver domain CH55_RS19455 SM00862 Transcriptional regulatory protein, C terminal CH55_RS19460 SM00387 Histidine kinase-like ATPases CH55_RS19460 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS19490 SM00937 CH55_RS19490 CH55_RS19525 SM00530 Helix-turn-helix XRE-family like proteins CH55_RS19535 SM00530 Helix-turn-helix XRE-family like proteins CH55_RS19540 SM00778 Zinc-binding domain of primase-helicase CH55_RS19540 SM00885 D5 N terminal like CH55_RS19655 SM00382 ATPases associated with a variety of cellular activities CH55_RS19660 SM00382 ATPases associated with a variety of cellular activities CH55_RS19700 SM00354 helix_turn _helix lactose operon repressor CH55_RS19715 SM00354 helix_turn _helix lactose operon repressor CH55_RS19795 SM00420 helix_turn_helix, Deoxyribose operon repressor CH55_RS19795 SM01134 CH55_RS19795 CH55_RS19805 SM01321 CH55_RS19805 CH55_RS19815 SM00382 ATPases associated with a variety of cellular activities CH55_RS19825 SM00869 Autotransporter beta-domain CH55_RS19845 SM00947 Carbonic anhydrase CH55_RS19865 SM00382 ATPases associated with a variety of cellular activities CH55_RS19925 SM00862 Transcriptional regulatory protein, C terminal CH55_RS19945 SM00849 Metallo-beta-lactamase superfamily CH55_RS19970 SM00354 helix_turn _helix lactose operon repressor CH55_RS20010 SM00927 DNA mismatch repair enzyme MutH CH55_RS20095 SM00646 CH55_RS20095 CH55_RS20110 SM00925 MltA specific insert domain CH55_RS20145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CH55_RS20145 SM00475 5'-3' exonuclease CH55_RS20165 SM01321 CH55_RS20165 CH55_RS20190 SM01321 CH55_RS20190 CH55_RS20200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH55_RS20245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH55_RS20255 SM00935 Outer membrane protein (OmpH-like) CH55_RS20285 SM00481 DNA polymerase alpha chain like domain CH55_RS20300 SM00977 TilS substrate C-terminal domain CH55_RS20320 SM01322 CH55_RS20320 CH55_RS20360 SM00382 ATPases associated with a variety of cellular activities CH55_RS20360 SM00930 CH55_RS20360 CH55_RS20415 SM00257 Lysin motif CH55_RS20420 SM00849 Metallo-beta-lactamase superfamily CH55_RS20435 SM00479 CH55_RS20435 CH55_RS20460 SM00382 ATPases associated with a variety of cellular activities CH55_RS20490 SM00778 Zinc-binding domain of primase-helicase CH55_RS20540 SM01321 CH55_RS20540 CH55_RS20610 SM00861 Transketolase, pyrimidine binding domain CH55_RS20625 SM00881 CoA binding domain CH55_RS20720 SM00855 Phosphoglycerate mutase family CH55_RS20765 SM00382 ATPases associated with a variety of cellular activities CH55_RS20790 SM00382 ATPases associated with a variety of cellular activities CH55_RS20810 SM00729 Elongator protein 3, MiaB family, Radical SAM CH55_RS20810 SM00876 Biotin and Thiamin Synthesis associated domain CH55_RS20830 SM00382 ATPases associated with a variety of cellular activities CH55_RS20835 SM00487 DEAD-like helicases superfamily CH55_RS20835 SM00490 helicase superfamily c-terminal domain CH55_RS20855 SM00729 Elongator protein 3, MiaB family, Radical SAM CH55_RS20885 SM01321 CH55_RS20885 CH55_RS20930 SM01321 CH55_RS20930 CH55_RS20945 SM00091 PAS domain CH55_RS20945 SM00387 Histidine kinase-like ATPases CH55_RS20945 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS20950 SM00382 ATPases associated with a variety of cellular activities CH55_RS20950 SM00448 cheY-homologous receiver domain CH55_RS20985 SM00382 ATPases associated with a variety of cellular activities CH55_RS21000 SM00487 DEAD-like helicases superfamily CH55_RS21000 SM00490 helicase superfamily c-terminal domain CH55_RS21065 SM00046 Diacylglycerol kinase catalytic domain (presumed) CH55_RS21080 SM00448 cheY-homologous receiver domain CH55_RS21080 SM00862 Transcriptional regulatory protein, C terminal CH55_RS21085 SM00387 Histidine kinase-like ATPases CH55_RS21090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS21090 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS21115 SM00382 ATPases associated with a variety of cellular activities CH55_RS21120 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH55_RS21180 SM00382 ATPases associated with a variety of cellular activities CH55_RS21215 SM01321 CH55_RS21215 CH55_RS21265 SM01130 CH55_RS21265 CH55_RS21340 SM00382 ATPases associated with a variety of cellular activities CH55_RS21375 SM00421 helix_turn_helix, Lux Regulon CH55_RS21375 SM00448 cheY-homologous receiver domain CH55_RS21390 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH55_RS21410 SM00919 Malic enzyme, NAD binding domain CH55_RS21410 SM01274 CH55_RS21410 CH55_RS21440 SM00869 Autotransporter beta-domain CH55_RS21460 SM01130 CH55_RS21460 CH55_RS21470 SM00364 Leucine-rich repeats, bacterial type CH55_RS21470 SM00369 Leucine-rich repeats, typical (most populated) subfamily CH55_RS21515 SM00382 ATPases associated with a variety of cellular activities CH55_RS21530 SM00448 cheY-homologous receiver domain CH55_RS21530 SM00862 Transcriptional regulatory protein, C terminal CH55_RS21535 SM00387 Histidine kinase-like ATPases CH55_RS21535 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS21540 SM00327 von Willebrand factor (vWF) type A domain CH55_RS21570 SM00450 Rhodanese Homology Domain CH55_RS21575 SM00382 ATPases associated with a variety of cellular activities CH55_RS21585 SM00448 cheY-homologous receiver domain CH55_RS21585 SM00862 Transcriptional regulatory protein, C terminal CH55_RS21590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH55_RS21590 SM00387 Histidine kinase-like ATPases CH55_RS21590 SM00388 His Kinase A (phosphoacceptor) domain CH55_RS21600 SM00382 ATPases associated with a variety of cellular activities CH55_RS21615 SM01321 CH55_RS21615 CH55_RS21645 SM00771 ZipA, C-terminal domain (FtsZ-binding) CH55_RS21650 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH55_RS21650 SM00292 breast cancer carboxy-terminal domain CH55_RS21650 SM00532 Ligase N family CH55_RS21680 SM01321 CH55_RS21680 CH55_RS21795 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH55_RS21815 SM00382 ATPases associated with a variety of cellular activities CH55_RS21835 SM00421 helix_turn_helix, Lux Regulon CH55_RS21880 SM00382 ATPases associated with a variety of cellular activities CH55_RS21880 SM01086 C-terminal, D2-small domain, of ClpB protein CH55_RS22030 SM00382 ATPases associated with a variety of cellular activities