locus-tag class description Y_RS00005 PF00258 Flavodoxin Y_RS00010 PF01037 Lrp/AsnC ligand binding domain Y_RS00015 PF03590 Aspartate-ammonia ligase Y_RS00020 PF05762 VWA domain containing CoxE-like protein Y_RS00025 PF17868 AAA lid domain Y_RS00025 PF12592 Protein of unknown function (DUF3763) Y_RS00025 PF07728 AAA domain (dynein-related subfamily) Y_RS00030 PF02705 K+ potassium transporter Y_RS00035 PF05025 RbsD / FucU transport protein family Y_RS00040 PF00294 pfkB family carbohydrate kinase Y_RS00050 PF07690 Major Facilitator Superfamily Y_RS00055 PF00392 Bacterial regulatory proteins, gntR family Y_RS00055 PF07729 FCD domain Y_RS00100 PF04204 Homoserine O-succinyltransferase Y_RS00105 PF01274 Malate synthase Y_RS00110 PF00463 Isocitrate lyase family Y_RS00115 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) Y_RS00120 PF01614 Bacterial transcriptional regulator Y_RS00120 PF09339 IclR helix-turn-helix domain Y_RS00125 PF01614 Bacterial transcriptional regulator Y_RS00125 PF09339 IclR helix-turn-helix domain Y_RS00130 PF00809 Pterin binding enzyme Y_RS00130 PF02310 B12 binding domain Y_RS00130 PF02574 Homocysteine S-methyltransferase Y_RS00130 PF02965 Vitamin B12 dependent methionine synthase, activation domain Y_RS00130 PF02607 B12 binding domain Y_RS00135 PF05860 haemagglutination activity domain Y_RS00135 PF13332 Hemagglutinin repeat Y_RS00140 PF08479 POTRA domain, ShlB-type Y_RS00140 PF17287 POTRA domain Y_RS00140 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Y_RS00150 PF00696 Amino acid kinase family Y_RS00150 PF01842 ACT domain Y_RS00155 PF00342 Phosphoglucose isomerase Y_RS00160 PF06146 Phosphate-starvation-inducible E Y_RS00165 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS00170 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS00170 PF14785 Maltose transport system permease protein MalF P2 domain Y_RS00175 PF01547 Bacterial extracellular solute-binding protein Y_RS00185 PF00005 ABC transporter Y_RS00185 PF17912 MalK OB fold domain Y_RS00190 PF02264 LamB porin Y_RS00195 PF07148 Maltose operon periplasmic protein precursor (MalM) Y_RS00205 PF05638 Type VI secretion system effector, Hcp Y_RS00215 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Y_RS00225 PF05947 Type VI secretion system, TssF Y_RS00230 PF01695 IstB-like ATP binding protein Y_RS00235 PF02796 Helix-turn-helix domain of resolvase Y_RS00235 PF00665 Integrase core domain Y_RS00240 PF01797 Transposase IS200 like Y_RS00245 PF06005 Cell division protein ZapB Y_RS00255 PF00230 Major intrinsic protein Y_RS00260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y_RS00260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y_RS00265 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Y_RS00270 PF00175 Oxidoreductase NAD-binding domain Y_RS00270 PF00970 Oxidoreductase FAD-binding domain Y_RS00275 PF05656 Protein of unknown function (DUF805) Y_RS00280 PF07305 Protein of unknown function (DUF1454) Y_RS00285 PF00121 Triosephosphate isomerase Y_RS00290 PF03466 LysR substrate binding domain Y_RS00290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS00295 PF02585 GlcNAc-PI de-N-acetylase Y_RS00300 PF03737 Aldolase/RraA Y_RS00305 PF00939 Sodium:sulfate symporter transmembrane region Y_RS00320 PF00365 Phosphofructokinase Y_RS00325 PF16916 Dimerisation domain of Zinc Transporter Y_RS00325 PF01545 Cation efflux family Y_RS00330 PF04754 Putative transposase, YhgA-like Y_RS00335 PF07813 LTXXQ motif family protein Y_RS00340 PF00072 Response regulator receiver domain Y_RS00340 PF00486 Transcriptional regulatory protein, C terminal Y_RS00345 PF00512 His Kinase A (phospho-acceptor) domain Y_RS00345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS00345 PF00672 HAMP domain Y_RS00345 PF16527 Two-component sensor protein CpxA, periplasmic domain Y_RS00350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Y_RS00350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Y_RS00350 PF12833 Helix-turn-helix domain Y_RS00350 PF02805 Metal binding domain of Ada Y_RS00355 PF00588 SpoU rRNA Methylase family Y_RS00360 PF00132 Bacterial transferase hexapeptide (six repeats) Y_RS00360 PF06426 Serine acetyltransferase, N-terminal Y_RS00370 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Y_RS00370 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Y_RS00375 PF02556 Preprotein translocase subunit SecB Y_RS00380 PF00462 Glutaredoxin Y_RS00385 PF00581 Rhodanese-like domain Y_RS00390 PF01676 Metalloenzyme superfamily Y_RS00390 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Y_RS00395 PF01551 Peptidase family M23 Y_RS00405 PF08240 Alcohol dehydrogenase GroES-like domain Y_RS00405 PF00107 Zinc-binding dehydrogenase Y_RS00410 PF00155 Aminotransferase class I and II Y_RS00415 PF01370 NAD dependent epimerase/dehydratase family Y_RS00420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Y_RS00425 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Y_RS00430 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Y_RS00435 PF00535 Glycosyl transferase family 2 Y_RS00440 PF01467 Cytidylyltransferase-like Y_RS00445 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Y_RS00445 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Y_RS00445 PF06827 Zinc finger found in FPG and IleRS Y_RS00450 PF00471 Ribosomal protein L33 Y_RS00455 PF00830 Ribosomal L28 family Y_RS00460 PF04002 RadC-like JAB domain Y_RS00465 PF04127 DNA / pantothenate metabolism flavoprotein Y_RS00465 PF02441 Flavoprotein Y_RS00470 PF00692 dUTPase Y_RS00475 PF00440 Bacterial regulatory proteins, tetR family Y_RS00480 PF00156 Phosphoribosyl transferase domain Y_RS00485 PF01138 3' exoribonuclease family, domain 1 Y_RS00485 PF03725 3' exoribonuclease family, domain 2 Y_RS00490 PF08340 Domain of unknown function (DUF1732) Y_RS00490 PF03755 YicC-like family, N-terminal region Y_RS00495 PF03458 UPF0126 domain Y_RS00500 PF01653 NAD-dependent DNA ligase adenylation domain Y_RS00500 PF03120 NAD-dependent DNA ligase OB-fold domain Y_RS00505 PF00625 Guanylate kinase Y_RS00510 PF01192 RNA polymerase Rpb6 Y_RS00515 PF04607 Region found in RelA / SpoT proteins Y_RS00515 PF13291 ACT domain Y_RS00515 PF02824 TGS domain Y_RS00520 PF12105 SpoU, rRNA methylase, C-terminal Y_RS00520 PF00588 SpoU rRNA Methylase family Y_RS00525 PF17191 RecG wedge domain Y_RS00525 PF00270 DEAD/DEAH box helicase Y_RS00525 PF00271 Helicase conserved C-terminal domain Y_RS00530 PF03616 Sodium/glutamate symporter Y_RS00535 PF00860 Permease family Y_RS00540 PF05170 AsmA family Y_RS00545 PF00583 Acetyltransferase (GNAT) family Y_RS00545 PF09500 Putative thioesterase (yiiD_Cterm) Y_RS00555 PF01695 IstB-like ATP binding protein Y_RS00560 PF13409 Glutathione S-transferase, N-terminal domain Y_RS00565 PF03466 LysR substrate binding domain Y_RS00565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS00570 PF17954 Quercetinase C-terminal cupin domain Y_RS00570 PF02678 Pirin Y_RS00575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Y_RS00580 PF04348 LppC putative lipoprotein Y_RS00585 PF02021 Uncharacterised protein family UPF0102 Y_RS00590 PF13580 SIS domain Y_RS00595 PF04972 BON domain Y_RS00600 PF00912 Transglycosylase Y_RS00615 PF00072 Response regulator receiver domain Y_RS00615 PF01627 Hpt domain Y_RS00615 PF18415 Histidine kinase receptor ArcB trans-membrane domain Y_RS00615 PF00512 His Kinase A (phospho-acceptor) domain Y_RS00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS00615 PF00989 PAS fold Y_RS00625 PF04055 Radical SAM superfamily Y_RS00625 PF16199 Radical_SAM C-terminal domain Y_RS00630 PF00310 Glutamine amidotransferases class-II Y_RS00630 PF04898 Glutamate synthase central domain Y_RS00630 PF01645 Conserved region in glutamate synthase Y_RS00630 PF01493 GXGXG motif Y_RS00635 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Y_RS00635 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS00645 PF04386 Stringent starvation protein B Y_RS00650 PF02798 Glutathione S-transferase, N-terminal domain Y_RS00650 PF00043 Glutathione S-transferase, C-terminal domain Y_RS00660 PF00380 Ribosomal protein S9/S16 Y_RS00665 PF00572 Ribosomal protein L13 Y_RS00670 PF03969 AFG1-like ATPase Y_RS00675 PF06295 Protein of unknown function (DUF1043) Y_RS00680 PF00595 PDZ domain Y_RS00680 PF13180 PDZ domain Y_RS00685 PF01797 Transposase IS200 like Y_RS00690 PF13180 PDZ domain Y_RS00695 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Y_RS00700 PF01722 BolA-like protein Y_RS00705 PF13466 STAS domain Y_RS00710 PF05494 MlaC protein Y_RS00715 PF02470 MlaD protein Y_RS00720 PF02405 Permease MlaE Y_RS00725 PF00005 ABC transporter Y_RS00730 PF01699 Sodium/calcium exchanger protein Y_RS00735 PF01380 SIS domain Y_RS00735 PF00571 CBS domain Y_RS00745 PF06835 Lipopolysaccharide-assembly, LptC-related Y_RS00750 PF03968 OstA-like protein Y_RS00755 PF12399 Branched-chain amino acid ATP-binding cassette transporter Y_RS00755 PF00005 ABC transporter Y_RS00760 PF04963 Sigma-54 factor, core binding domain Y_RS00760 PF00309 Sigma-54 factor, Activator interacting domain (AID) Y_RS00760 PF04552 Sigma-54, DNA binding domain Y_RS00770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Y_RS00775 PF03668 P-loop ATPase protein family Y_RS00780 PF00381 PTS HPr component phosphorylation site Y_RS00785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Y_RS00785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Y_RS00790 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Y_RS00790 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Y_RS00795 PF01042 Endoribonuclease L-PSP Y_RS00805 PF00356 Bacterial regulatory proteins, lacI family Y_RS00810 PF02378 Phosphotransferase system, EIIC Y_RS00810 PF00367 phosphotransferase system, EIIB Y_RS00815 PF00128 Alpha amylase, catalytic domain Y_RS00815 PF11941 Domain of unknown function (DUF3459) Y_RS00820 PF01272 Transcription elongation factor, GreA/GreB, C-term Y_RS00820 PF14760 Rnk N-terminus Y_RS00825 PF07361 Cytochrome b562 Y_RS00835 PF01523 Putative modulator of DNA gyrase Y_RS00840 PF04751 Protein of unknown function (DUF615) Y_RS00845 PF01337 Barstar (barnase inhibitor) Y_RS00855 PF00171 Aldehyde dehydrogenase family Y_RS00860 PF00171 Aldehyde dehydrogenase family Y_RS00865 PF04632 Fusaric acid resistance protein family Y_RS00870 PF13533 Biotin-lipoyl like Y_RS00875 PF07869 Protein of unknown function (DUF1656) Y_RS00880 PF03466 LysR substrate binding domain Y_RS00880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS00885 PF03466 LysR substrate binding domain Y_RS00895 PF18413 Neuraminidase-like domain Y_RS00895 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain Y_RS00900 PF03534 Salmonella virulence plasmid 65kDa B protein Y_RS00900 PF12255 Insecticide toxin TcdB middle/C-terminal region Y_RS00900 PF12256 Insecticide toxin TcdB middle/N-terminal region Y_RS00925 PF05785 Rho-activating domain of cytotoxic necrotizing factor Y_RS00925 PF18807 Tripartite Tc toxins repeat Y_RS00930 PF14431 YwqJ-like deaminase Y_RS00930 PF18807 Tripartite Tc toxins repeat Y_RS00935 PF01523 Putative modulator of DNA gyrase Y_RS00940 PF00795 Carbon-nitrogen hydrolase Y_RS00945 PF13116 Protein of unknown function Y_RS00945 PF13502 AsmA-like C-terminal region Y_RS00950 PF00575 S1 RNA binding domain Y_RS00950 PF10150 Ribonuclease E/G family Y_RS00955 PF02545 Maf-like protein Y_RS00960 PF04093 rod shape-determining protein MreD Y_RS00965 PF04085 rod shape-determining protein MreC Y_RS00975 PF00563 EAL domain Y_RS00975 PF00990 Diguanylate cyclase, GGDEF domain Y_RS00975 PF17157 Gammaproteobacterial periplasmic sensor domain Y_RS00980 PF08240 Alcohol dehydrogenase GroES-like domain Y_RS00980 PF00107 Zinc-binding dehydrogenase Y_RS00985 PF00174 Oxidoreductase molybdopterin binding domain Y_RS00990 PF01794 Ferric reductase like transmembrane component Y_RS00995 PF01220 Dehydroquinase class II Y_RS01000 PF00364 Biotin-requiring enzyme Y_RS01005 PF00289 Biotin carboxylase, N-terminal domain Y_RS01005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Y_RS01005 PF02785 Biotin carboxylase C-terminal domain Y_RS01010 PF06196 Protein of unknown function (DUF997) Y_RS01015 PF00474 Sodium:solute symporter family Y_RS01025 PF01207 Dihydrouridine synthase (Dus) Y_RS01030 PF02954 Bacterial regulatory protein, Fis family Y_RS01050 PF07690 Major Facilitator Superfamily Y_RS01055 PF02627 Carboxymuconolactone decarboxylase family Y_RS01060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Y_RS01060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Y_RS01065 PF00753 Metallo-beta-lactamase superfamily Y_RS01070 PF05433 Glycine zipper 2TM domain Y_RS01080 PF00313 'Cold-shock' DNA-binding domain Y_RS01085 PF00313 'Cold-shock' DNA-binding domain Y_RS01090 PF01797 Transposase IS200 like Y_RS01110 PF02798 Glutathione S-transferase, N-terminal domain Y_RS01115 PF01380 SIS domain Y_RS01115 PF00571 CBS domain Y_RS01120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y_RS01120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y_RS01130 PF02653 Branched-chain amino acid transport system / permease component Y_RS01135 PF00005 ABC transporter Y_RS01145 PF03279 Bacterial lipid A biosynthesis acyltransferase Y_RS01155 PF00999 Sodium/hydrogen exchanger family Y_RS01160 PF00860 Permease family Y_RS01165 PF04221 RelB antitoxin Y_RS01170 PF00005 ABC transporter Y_RS01175 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS01180 PF00296 Luciferase-like monooxygenase Y_RS01185 PF09084 NMT1/THI5 like Y_RS01190 PF03358 NADPH-dependent FMN reductase Y_RS01195 PF01791 DeoC/LacD family aldolase Y_RS01200 PF00294 pfkB family carbohydrate kinase Y_RS01205 PF05025 RbsD / FucU transport protein family Y_RS01210 PF02311 AraC-like ligand binding domain Y_RS01210 PF12833 Helix-turn-helix domain Y_RS01215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Y_RS01215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Y_RS01230 PF05593 RHS Repeat Y_RS01230 PF03527 RHS protein Y_RS01240 PF04717 Type VI secretion system, phage-baseplate injector Y_RS01270 PF05593 RHS Repeat Y_RS01270 PF03527 RHS protein Y_RS01285 PF04717 Type VI secretion system, phage-baseplate injector Y_RS01320 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS01320 PF07724 AAA domain (Cdc48 subfamily) Y_RS01320 PF17871 AAA lid domain Y_RS01320 PF10431 C-terminal, D2-small domain, of ClpB protein Y_RS01330 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE Y_RS01350 PF05947 Type VI secretion system, TssF Y_RS01360 PF13333 Integrase core domain Y_RS01360 PF13276 HTH-like domain Y_RS01360 PF00665 Integrase core domain Y_RS01365 PF02796 Helix-turn-helix domain of resolvase Y_RS01365 PF00665 Integrase core domain Y_RS01370 PF01695 IstB-like ATP binding protein Y_RS01375 PF00005 ABC transporter Y_RS01375 PF00664 ABC transporter transmembrane region Y_RS01375 PF03412 Peptidase C39 family Y_RS01380 PF00529 HlyD membrane-fusion protein of T1SS Y_RS01380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Y_RS01400 PF03737 Aldolase/RraA Y_RS01405 PF01040 UbiA prenyltransferase family Y_RS01410 PF10431 C-terminal, D2-small domain, of ClpB protein Y_RS01410 PF07724 AAA domain (Cdc48 subfamily) Y_RS01410 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS01415 PF00227 Proteasome subunit Y_RS01420 PF05036 Sporulation related domain Y_RS01425 PF00356 Bacterial regulatory proteins, lacI family Y_RS01435 PF00270 DEAD/DEAH box helicase Y_RS01435 PF00271 Helicase conserved C-terminal domain Y_RS01435 PF18074 Primosomal protein N C-terminal domain Y_RS01435 PF17764 3′ DNA-binding domain (3′BD) Y_RS01435 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Y_RS01440 PF01197 Ribosomal protein L31 Y_RS01445 PF05360 yiaA/B two helix domain Y_RS01455 PF01340 Met Apo-repressor, MetJ Y_RS01465 PF00696 Amino acid kinase family Y_RS01465 PF00742 Homoserine dehydrogenase Y_RS01465 PF03447 Homoserine dehydrogenase, NAD binding domain Y_RS01470 PF02219 Methylenetetrahydrofolate reductase Y_RS01475 PF13333 Integrase core domain Y_RS01475 PF00665 Integrase core domain Y_RS01475 PF13276 HTH-like domain Y_RS01485 PF00311 Phosphoenolpyruvate carboxylase Y_RS01490 PF01546 Peptidase family M20/M25/M40 Y_RS01490 PF07687 Peptidase dimerisation domain Y_RS01495 PF01118 Semialdehyde dehydrogenase, NAD binding domain Y_RS01495 PF02774 Semialdehyde dehydrogenase, dimerisation domain Y_RS01500 PF00696 Amino acid kinase family Y_RS01505 PF14698 Argininosuccinate lyase C-terminal Y_RS01505 PF00206 Lyase Y_RS01515 PF07715 TonB-dependent Receptor Plug Domain Y_RS01515 PF00593 TonB dependent receptor Y_RS01525 PF00664 ABC transporter transmembrane region Y_RS01525 PF00005 ABC transporter Y_RS01530 PF00529 HlyD membrane-fusion protein of T1SS Y_RS01535 PF03544 Gram-negative bacterial TonB protein C-terminal Y_RS01540 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS01540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y_RS01545 PF00462 Glutaredoxin Y_RS01545 PF08534 Redoxin Y_RS01550 PF03466 LysR substrate binding domain Y_RS01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS01555 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS01555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y_RS01560 PF00440 Bacterial regulatory proteins, tetR family Y_RS01565 PF07226 Protein of unknown function (DUF1422) Y_RS01570 PF05958 tRNA (Uracil-5-)-methyltransferase Y_RS01580 PF00593 TonB dependent receptor Y_RS01580 PF07715 TonB-dependent Receptor Plug Domain Y_RS01585 PF01177 Asp/Glu/Hydantoin racemase Y_RS01630 PF13407 Periplasmic binding protein domain Y_RS01635 PF00005 ABC transporter Y_RS01640 PF02653 Branched-chain amino acid transport system / permease component Y_RS01645 PF02653 Branched-chain amino acid transport system / permease component Y_RS01650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS01650 PF03466 LysR substrate binding domain Y_RS01655 PF04219 Protein of unknown function, DUF Y_RS01660 PF01078 Magnesium chelatase, subunit ChlI Y_RS01660 PF13335 Magnesium chelatase, subunit ChlI C-terminal Y_RS01665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Y_RS01665 PF00205 Thiamine pyrophosphate enzyme, central domain Y_RS01665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Y_RS01675 PF01063 Amino-transferase class IV Y_RS01680 PF00920 Dehydratase family Y_RS01685 PF00291 Pyridoxal-phosphate dependent enzyme Y_RS01685 PF00585 C-terminal regulatory domain of Threonine dehydratase Y_RS01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS01720 PF03466 LysR substrate binding domain Y_RS01725 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Y_RS01725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Y_RS01750 PF01320 Colicin immunity protein / pyocin immunity protein Y_RS01760 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS01760 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS01770 PF13954 PapC N-terminal domain Y_RS01770 PF00577 Outer membrane usher protein Y_RS01770 PF13953 PapC C-terminal domain Y_RS01775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS01775 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS01790 PF00872 Transposase, Mutator family Y_RS01810 PF13361 UvrD-like helicase C-terminal domain Y_RS01810 PF00580 UvrD/REP helicase N-terminal domain Y_RS01815 PF02541 Ppx/GppA phosphatase family Y_RS01820 PF02541 Ppx/GppA phosphatase family Y_RS01825 PF00271 Helicase conserved C-terminal domain Y_RS01825 PF00270 DEAD/DEAH box helicase Y_RS01830 PF00085 Thioredoxin Y_RS01835 PF07497 Rho termination factor, RNA-binding domain Y_RS01835 PF07498 Rho termination factor, N-terminal domain Y_RS01835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y_RS01840 PF00953 Glycosyl transferase family 4 Y_RS01845 PF02706 Chain length determinant protein Y_RS01850 PF02350 UDP-N-acetylglucosamine 2-epimerase Y_RS01855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Y_RS01855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Y_RS01855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Y_RS01860 PF16363 GDP-mannose 4,6 dehydratase Y_RS01865 PF00483 Nucleotidyl transferase Y_RS01875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Y_RS01880 PF01943 Polysaccharide biosynthesis protein Y_RS01885 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 Y_RS01890 PF06899 WzyE protein, O-antigen assembly polymerase Y_RS01895 PF03808 Glycosyl transferase WecB/TagA/CpsF family Y_RS01900 PF00324 Amino acid permease Y_RS01925 PF01797 Transposase IS200 like Y_RS01930 PF07719 Tetratricopeptide repeat Y_RS01930 PF07219 HemY protein N-terminus Y_RS01935 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase Y_RS01940 PF02602 Uroporphyrinogen-III synthase HemD Y_RS01945 PF03900 Porphobilinogen deaminase, C-terminal domain Y_RS01945 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Y_RS01950 PF12633 Adenylate cyclase NT domain Y_RS01950 PF01295 Adenylate cyclase, class-I Y_RS01955 PF01491 Frataxin-like domain Y_RS01960 PF13627 Prokaryotic lipoprotein-attachment site Y_RS01965 PF01678 Diaminopimelate epimerase Y_RS01970 PF04340 Protein of unknown function, DUF484 Y_RS01975 PF00589 Phage integrase family Y_RS01975 PF02899 Phage integrase, N-terminal SAM-like domain Y_RS01980 PF13419 Haloacid dehalogenase-like hydrolase Y_RS01985 PF13361 UvrD-like helicase C-terminal domain Y_RS01985 PF00580 UvrD/REP helicase N-terminal domain Y_RS02000 PF09370 Phosphoenolpyruvate hydrolase-like Y_RS02005 PF01544 CorA-like Mg2+ transporter protein Y_RS02010 PF00892 EamA-like transporter family Y_RS02015 PF03061 Thioesterase superfamily Y_RS02020 PF02253 Phospholipase A1 Y_RS02025 PF00271 Helicase conserved C-terminal domain Y_RS02025 PF00270 DEAD/DEAH box helicase Y_RS02025 PF09382 RQC domain Y_RS02025 PF16124 RecQ zinc-binding Y_RS02025 PF00570 HRDC domain Y_RS02030 PF01810 LysE type translocator Y_RS02035 PF01810 LysE type translocator Y_RS02040 PF12146 Serine aminopeptidase, S33 Y_RS02055 PF03009 Glycerophosphoryl diester phosphodiesterase family Y_RS02065 PF01266 FAD dependent oxidoreductase Y_RS02065 PF04324 BFD-like [2Fe-2S] binding domain Y_RS02070 PF00890 FAD binding domain Y_RS02075 PF02754 Cysteine-rich domain Y_RS02075 PF13183 4Fe-4S dicluster domain Y_RS02080 PF08786 DcrB Y_RS02085 PF02592 Putative vitamin uptake transporter Y_RS02090 PF01206 Sulfurtransferase TusA Y_RS02095 PF00403 Heavy-metal-associated domain Y_RS02100 PF07947 YhhN family Y_RS02115 PF06611 Protein of unknown function (DUF1145) Y_RS02130 PF00448 SRP54-type protein, GTPase domain Y_RS02130 PF02881 SRP54-type protein, helical bundle domain Y_RS02130 PF00448 SRP54-type protein, GTPase domain Y_RS02130 PF02881 SRP54-type protein, helical bundle domain Y_RS02135 PF00005 ABC transporter Y_RS02140 PF02687 FtsX-like permease family Y_RS02140 PF18075 FtsX extracellular domain Y_RS02145 PF00140 Sigma-70 factor, region 1.2 Y_RS02145 PF04542 Sigma-70 region 2 Y_RS02145 PF04545 Sigma-70, region 4 Y_RS02155 PF01797 Transposase IS200 like Y_RS02160 PF12568 Acetyltransferase (GNAT) domain, PanZ Y_RS02165 PF13458 Periplasmic binding protein Y_RS02170 PF02653 Branched-chain amino acid transport system / permease component Y_RS02175 PF11862 Domain of unknown function (DUF3382) Y_RS02175 PF02653 Branched-chain amino acid transport system / permease component Y_RS02180 PF12399 Branched-chain amino acid ATP-binding cassette transporter Y_RS02180 PF00005 ABC transporter Y_RS02185 PF00005 ABC transporter Y_RS02225 PF13416 Bacterial extracellular solute-binding protein Y_RS02230 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS02235 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS02240 PF17912 MalK OB fold domain Y_RS02240 PF00005 ABC transporter Y_RS02245 PF03009 Glycerophosphoryl diester phosphodiesterase family Y_RS02250 PF03547 Membrane transport protein Y_RS02255 PF00892 EamA-like transporter family Y_RS02260 PF03466 LysR substrate binding domain Y_RS02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS02265 PF01717 Cobalamin-independent synthase, Catalytic domain Y_RS02265 PF08267 Cobalamin-independent synthase, N-terminal domain Y_RS02270 PF01738 Dienelactone hydrolase family Y_RS02275 PF01048 Phosphorylase superfamily Y_RS02285 PF13722 5TM C-terminal transporter carbon starvation CstA Y_RS02285 PF02554 Carbon starvation protein CstA Y_RS02290 PF09335 SNARE associated Golgi protein Y_RS02295 PF02646 RmuC family Y_RS02300 PF01209 ubiE/COQ5 methyltransferase family Y_RS02305 PF02036 SCP-2 sterol transfer family Y_RS02310 PF03109 ABC1 family Y_RS02315 PF02416 mttA/Hcf106 family Y_RS02325 PF00902 Sec-independent protein translocase protein (TatC) Y_RS02330 PF01026 TatD related DNase Y_RS02335 PF00665 Integrase core domain Y_RS02335 PF02796 Helix-turn-helix domain of resolvase Y_RS02340 PF01695 IstB-like ATP binding protein Y_RS02345 PF01026 TatD related DNase Y_RS02350 PF00490 Delta-aminolevulinic acid dehydratase Y_RS02355 PF02357 Transcription termination factor nusG Y_RS02360 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Y_RS02365 PF00175 Oxidoreductase NAD-binding domain Y_RS02365 PF00970 Oxidoreductase FAD-binding domain Y_RS02370 PF00108 Thiolase, N-terminal domain Y_RS02370 PF02803 Thiolase, C-terminal domain Y_RS02375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Y_RS02375 PF00378 Enoyl-CoA hydratase/isomerase Y_RS02375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Y_RS02380 PF00557 Metallopeptidase family M24 Y_RS02385 PF01205 Uncharacterized protein family UPF0029 Y_RS02385 PF09186 Domain of unknown function (DUF1949) Y_RS02390 PF01797 Transposase IS200 like Y_RS02395 PF09186 Domain of unknown function (DUF1949) Y_RS02395 PF01205 Uncharacterized protein family UPF0029 Y_RS02400 PF02386 Cation transport protein Y_RS02405 PF12724 Flavodoxin domain Y_RS02440 PF01565 FAD binding domain Y_RS02440 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Y_RS02445 PF02237 Biotin protein ligase C terminal domain Y_RS02445 PF08279 HTH domain Y_RS02445 PF03099 Biotin/lipoate A/B protein ligase family Y_RS02450 PF00485 Phosphoribulokinase / Uridine kinase family Y_RS02455 PF13673 Acetyltransferase (GNAT) domain Y_RS02460 PF02796 Helix-turn-helix domain of resolvase Y_RS02460 PF00665 Integrase core domain Y_RS02465 PF01695 IstB-like ATP binding protein Y_RS02490 PF00009 Elongation factor Tu GTP binding domain Y_RS02490 PF03144 Elongation factor Tu domain 2 Y_RS02490 PF03143 Elongation factor Tu C-terminal domain Y_RS02495 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Y_RS02500 PF00467 KOW motif Y_RS02500 PF02357 Transcription termination factor nusG Y_RS02505 PF00298 Ribosomal protein L11, RNA binding domain Y_RS02505 PF03946 Ribosomal protein L11, N-terminal domain Y_RS02510 PF00687 Ribosomal protein L1p/L10e family Y_RS02515 PF00466 Ribosomal protein L10 Y_RS02520 PF16320 Ribosomal protein L7/L12 dimerisation domain Y_RS02520 PF00542 Ribosomal protein L7/L12 C-terminal domain Y_RS02525 PF04561 RNA polymerase Rpb2, domain 2 Y_RS02525 PF10385 RNA polymerase beta subunit external 1 domain Y_RS02525 PF00562 RNA polymerase Rpb2, domain 6 Y_RS02525 PF04563 RNA polymerase beta subunit Y_RS02525 PF04565 RNA polymerase Rpb2, domain 3 Y_RS02525 PF04560 RNA polymerase Rpb2, domain 7 Y_RS02530 PF04997 RNA polymerase Rpb1, domain 1 Y_RS02530 PF04983 RNA polymerase Rpb1, domain 3 Y_RS02530 PF05000 RNA polymerase Rpb1, domain 4 Y_RS02530 PF04998 RNA polymerase Rpb1, domain 5 Y_RS02530 PF00623 RNA polymerase Rpb1, domain 2 Y_RS02535 PF01797 Transposase IS200 like Y_RS02550 PF04055 Radical SAM superfamily Y_RS02550 PF06968 Biotin and Thiamin Synthesis associated domain Y_RS02555 PF05690 Thiazole biosynthesis protein ThiG Y_RS02565 PF00899 ThiF family Y_RS02570 PF02581 Thiamine monophosphate synthase Y_RS02575 PF13667 ThiC-associated domain Y_RS02575 PF01964 Radical SAM ThiC family Y_RS02585 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Y_RS02590 PF00293 NUDIX domain Y_RS02590 PF09297 NADH pyrophosphatase zinc ribbon domain Y_RS02600 PF01208 Uroporphyrinogen decarboxylase (URO-D) Y_RS02605 PF04493 Endonuclease V Y_RS02610 PF04222 Protein of unknown function (DUF416) Y_RS02615 PF00216 Bacterial DNA-binding protein Y_RS02620 PF07356 Protein of unknown function (DUF1481) Y_RS02625 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Y_RS02625 PF02844 Phosphoribosylglycinamide synthetase, N domain Y_RS02625 PF02843 Phosphoribosylglycinamide synthetase, C domain Y_RS02630 PF02142 MGS-like domain Y_RS02630 PF01808 AICARFT/IMPCHase bienzyme Y_RS02660 PF01527 Transposase Y_RS02665 PF13276 HTH-like domain Y_RS02665 PF13683 Integrase core domain Y_RS02670 PF01695 IstB-like ATP binding protein Y_RS02675 PF02796 Helix-turn-helix domain of resolvase Y_RS02675 PF00665 Integrase core domain Y_RS02685 PF00474 Sodium:solute symporter family Y_RS02690 PF04341 Protein of unknown function, DUF485 Y_RS02695 PF00501 AMP-binding enzyme Y_RS02695 PF13193 AMP-binding enzyme C-terminal domain Y_RS02695 PF16177 Acetyl-coenzyme A synthetase N-terminus Y_RS02700 PF00375 Sodium:dicarboxylate symporter family Y_RS02705 PF00072 Response regulator receiver domain Y_RS02705 PF00196 Bacterial regulatory proteins, luxR family Y_RS02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS02710 PF00072 Response regulator receiver domain Y_RS02710 PF00512 His Kinase A (phospho-acceptor) domain Y_RS02710 PF01627 Hpt domain Y_RS02710 PF00672 HAMP domain Y_RS02710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Y_RS02715 PF00263 Bacterial type II and III secretion system protein Y_RS02715 PF03958 Bacterial type II/III secretion system short domain Y_RS02730 PF12833 Helix-turn-helix domain Y_RS02730 PF14525 AraC-binding-like domain Y_RS02765 PF00771 FHIPEP family Y_RS02770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y_RS02770 PF18269 T3SS EscN ATPase C-terminal domain Y_RS02785 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Y_RS02790 PF00813 FliP family Y_RS02795 PF01313 Bacterial export proteins, family 3 Y_RS02800 PF01311 Bacterial export proteins, family 1 Y_RS02805 PF01312 FlhB HrpN YscU SpaS Family Y_RS02810 PF04143 Sulphur transport Y_RS02815 PF01206 Sulfurtransferase TusA Y_RS02820 PF03466 LysR substrate binding domain Y_RS02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS02825 PF03222 Tryptophan/tyrosine permease family Y_RS02830 PF01053 Cys/Met metabolism PLP-dependent enzyme Y_RS02835 PF00005 ABC transporter Y_RS02840 PF01032 FecCD transport family Y_RS02845 PF01497 Periplasmic binding protein Y_RS02850 PF05171 Haemin-degrading HemS.ChuX domain Y_RS02855 PF00593 TonB dependent receptor Y_RS02855 PF07715 TonB-dependent Receptor Plug Domain Y_RS02860 PF13460 NAD(P)H-binding Y_RS02865 PF06228 Haem utilisation ChuX/HutX Y_RS02870 PF04055 Radical SAM superfamily Y_RS02890 PF15608 PELOTA RNA binding domain Y_RS02890 PF11202 Phosphoribosyl transferase (PRTase) Y_RS02910 PF02342 TerD domain Y_RS02915 PF02342 TerD domain Y_RS02920 PF05099 Tellurite resistance protein TerB Y_RS02925 PF03741 Integral membrane protein TerC family Y_RS02930 PF02342 TerD domain Y_RS02935 PF02342 TerD domain Y_RS02945 PF00577 Outer membrane usher protein Y_RS02945 PF13953 PapC C-terminal domain Y_RS02945 PF13954 PapC N-terminal domain Y_RS02950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS02970 PF01565 FAD binding domain Y_RS02970 PF08031 Berberine and berberine like Y_RS02975 PF12951 Passenger-associated-transport-repeat Y_RS02980 PF04345 Chorismate lyase Y_RS02985 PF01040 UbiA prenyltransferase family Y_RS02990 PF01553 Acyltransferase Y_RS02995 PF01219 Prokaryotic diacylglycerol kinase Y_RS03000 PF01726 LexA DNA binding domain Y_RS03000 PF00717 Peptidase S24-like Y_RS03005 PF01475 Ferric uptake regulator family Y_RS03010 PF01207 Dihydrouridine synthase (Dus) Y_RS03015 PF09583 Phage shock protein G (Phageshock_PspG) Y_RS03020 PF00107 Zinc-binding dehydrogenase Y_RS03020 PF08240 Alcohol dehydrogenase GroES-like domain Y_RS03025 PF00772 DnaB-like helicase N terminal domain Y_RS03025 PF03796 DnaB-like helicase C terminal domain Y_RS03030 PF01168 Alanine racemase, N-terminal domain Y_RS03030 PF00842 Alanine racemase, C-terminal domain Y_RS03035 PF00155 Aminotransferase class I and II Y_RS03040 PF04237 YjbR Y_RS03045 PF17760 UvrA interaction domain Y_RS03045 PF17755 UvrA DNA-binding domain Y_RS03045 PF00005 ABC transporter Y_RS03050 PF00436 Single-strand binding protein family Y_RS03055 PF05336 L-rhamnose mutarotase Y_RS03060 PF00465 Iron-containing alcohol dehydrogenase Y_RS03065 PF00596 Class II Aldolase and Adducin N-terminal domain Y_RS03070 PF06134 L-rhamnose isomerase (RhaA) Y_RS03075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y_RS03075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y_RS03090 PF02311 AraC-like ligand binding domain Y_RS03090 PF12833 Helix-turn-helix domain Y_RS03095 PF12833 Helix-turn-helix domain Y_RS03095 PF02311 AraC-like ligand binding domain Y_RS03100 PF06379 L-rhamnose-proton symport protein (RhaT) Y_RS03135 PF13247 4Fe-4S dicluster domain Y_RS03135 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Y_RS03135 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS03140 PF12800 4Fe-4S binding domain Y_RS03140 PF13247 4Fe-4S dicluster domain Y_RS03145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Y_RS03145 PF00384 Molybdopterin oxidoreductase Y_RS03145 PF01568 Molydopterin dinucleotide binding domain Y_RS03150 PF11412 Disulphide bond corrector protein DsbC Y_RS03150 PF02683 Cytochrome C biogenesis protein transmembrane region Y_RS03155 PF03091 CutA1 divalent ion tolerance protein Y_RS03160 PF03605 Anaerobic c4-dicarboxylate membrane transporter Y_RS03165 PF00206 Lyase Y_RS03165 PF10415 Fumarase C C-terminus Y_RS03170 PF04186 FxsA cytoplasmic membrane protein Y_RS03175 PF00166 Chaperonin 10 Kd subunit Y_RS03180 PF00118 TCP-1/cpn60 chaperonin family Y_RS03185 PF13698 Domain of unknown function (DUF4156) Y_RS03190 PF04055 Radical SAM superfamily Y_RS03195 PF08207 Elongation factor P (EF-P) KOW-like domain Y_RS03195 PF09285 Elongation factor P, C-terminal Y_RS03195 PF01132 Elongation factor P (EF-P) OB domain Y_RS03200 PF00893 Small Multidrug Resistance protein Y_RS03205 PF02313 Fumarate reductase subunit D Y_RS03210 PF02300 Fumarate reductase subunit C Y_RS03215 PF13085 2Fe-2S iron-sulfur cluster binding domain Y_RS03215 PF13183 4Fe-4S dicluster domain Y_RS03220 PF02910 Fumarate reductase flavoprotein C-term Y_RS03220 PF00890 FAD binding domain Y_RS03230 PF00152 tRNA synthetases class II (D, K and N) Y_RS03235 PF00924 Mechanosensitive ion channel Y_RS03235 PF12795 Mechanosensitive ion channel porin domain Y_RS03235 PF12794 Mechanosensitive ion channel inner membrane domain 1 Y_RS03240 PF02666 Phosphatidylserine decarboxylase Y_RS03245 PF03193 RsgA GTPase Y_RS03255 PF00929 Exonuclease Y_RS03275 PF08331 Domain of unknown function (DUF1730) Y_RS03280 PF03853 YjeF-related protein N-terminus Y_RS03280 PF01256 Carbohydrate kinase Y_RS03285 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Y_RS03290 PF01520 N-acetylmuramoyl-L-alanine amidase Y_RS03295 PF08676 MutL C terminal dimerisation domain Y_RS03295 PF01119 DNA mismatch repair protein, C-terminal domain Y_RS03305 PF17209 Hfq protein Y_RS03310 PF13167 GTP-binding GTPase N-terminal Y_RS03310 PF01926 50S ribosome-binding GTPase Y_RS03310 PF16360 GTP-binding GTPase Middle Region Y_RS03315 PF12221 Bacterial membrane protein N terminal Y_RS03315 PF01145 SPFH domain / Band 7 family Y_RS03320 PF01145 SPFH domain / Band 7 family Y_RS03325 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) Y_RS03330 PF00709 Adenylosuccinate synthetase Y_RS03335 PF02082 Transcriptional regulator Y_RS03340 PF00773 RNB domain Y_RS03340 PF08206 Ribonuclease B OB domain Y_RS03340 PF17876 Cold shock domain Y_RS03340 PF00575 S1 RNA binding domain Y_RS03340 PF08461 Ribonuclease R winged-helix domain Y_RS03345 PF08032 RNA 2'-O ribose methyltransferase substrate binding Y_RS03345 PF00588 SpoU rRNA Methylase family Y_RS03350 PF18158 Adaptive response protein AidB N-terminal domain Y_RS03350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Y_RS03350 PF02770 Acyl-CoA dehydrogenase, middle domain Y_RS03355 PF07338 Protein of unknown function (DUF1471) Y_RS03365 PF01695 IstB-like ATP binding protein Y_RS03370 PF02796 Helix-turn-helix domain of resolvase Y_RS03370 PF00665 Integrase core domain Y_RS03375 PF00326 Prolyl oligopeptidase family Y_RS03385 PF01250 Ribosomal protein S6 Y_RS03390 PF00436 Single-strand binding protein family Y_RS03395 PF01084 Ribosomal protein S18 Y_RS03400 PF01281 Ribosomal protein L9, N-terminal domain Y_RS03400 PF03948 Ribosomal protein L9, C-terminal domain Y_RS03410 PF01797 Transposase IS200 like Y_RS03420 PF04225 Opacity-associated protein A LysM-like domain Y_RS03420 PF08525 Opacity-associated protein A N-terminal motif Y_RS03425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Y_RS03425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Y_RS03430 PF04405 Domain of Unknown function (DUF542) Y_RS03430 PF01814 Hemerythrin HHE cation binding domain Y_RS03435 PF00149 Calcineurin-like phosphoesterase Y_RS03435 PF02872 5'-nucleotidase, C-terminal domain Y_RS03440 PF00459 Inositol monophosphatase family Y_RS03445 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) Y_RS03450 PF06526 Protein of unknown function (DUF1107) Y_RS03455 PF01595 Cyclin M transmembrane N-terminal domain Y_RS03455 PF03471 Transporter associated domain Y_RS03455 PF00571 CBS domain Y_RS03460 PF01625 Peptide methionine sulfoxide reductase Y_RS03465 PF17243 POTRA domain TamA domain 1 Y_RS03465 PF07244 Surface antigen variable number repeat Y_RS03465 PF01103 Surface antigen Y_RS03470 PF04357 TamB, inner membrane protein subunit of TAM complex Y_RS03475 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like Y_RS03480 PF00719 Inorganic pyrophosphatase Y_RS03485 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Y_RS03490 PF01225 Mur ligase family, catalytic domain Y_RS03490 PF08245 Mur ligase middle domain Y_RS03490 PF02875 Mur ligase family, glutamate ligase domain Y_RS03505 PF01316 Arginine repressor, DNA binding domain Y_RS03505 PF02863 Arginine repressor, C-terminal domain Y_RS03510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Y_RS03510 PF00056 lactate/malate dehydrogenase, NAD binding domain Y_RS03515 PF13693 Winged helix-turn-helix DNA-binding Y_RS03525 PF00348 Polyprenyl synthetase Y_RS03530 PF00829 Ribosomal prokaryotic L21 protein Y_RS03535 PF01016 Ribosomal L27 protein Y_RS03540 PF00892 EamA-like transporter family Y_RS03545 PF01018 GTP1/OBG Y_RS03545 PF01926 50S ribosome-binding GTPase Y_RS03550 PF00512 His Kinase A (phospho-acceptor) domain Y_RS03550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS03550 PF00672 HAMP domain Y_RS03555 PF00486 Transcriptional regulatory protein, C terminal Y_RS03555 PF00072 Response regulator receiver domain Y_RS03560 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Y_RS03565 PF03449 Transcription elongation factor, N-terminal Y_RS03565 PF01272 Transcription elongation factor, GreA/GreB, C-term Y_RS03570 PF01985 CRS1 / YhbY (CRM) domain Y_RS03575 PF01728 FtsJ-like methyltransferase Y_RS03580 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS03580 PF01434 Peptidase family M41 Y_RS03580 PF06480 FtsH Extracellular Y_RS03580 PF17862 AAA+ lid domain Y_RS03585 PF00809 Pterin binding enzyme Y_RS03590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Y_RS03590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Y_RS03590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Y_RS03590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Y_RS03595 PF03840 Preprotein translocase SecG subunit Y_RS03610 PF17384 RimP C-terminal SH3 domain Y_RS03610 PF02576 RimP N-terminal domain Y_RS03615 PF13184 NusA-like KH domain Y_RS03615 PF00575 S1 RNA binding domain Y_RS03615 PF08529 NusA N-terminal domain Y_RS03620 PF03144 Elongation factor Tu domain 2 Y_RS03620 PF00009 Elongation factor Tu GTP binding domain Y_RS03620 PF11987 Translation-initiation factor 2 Y_RS03620 PF04760 Translation initiation factor IF-2, N-terminal region Y_RS03620 PF08364 Bacterial translation initiation factor IF-2 associated region Y_RS03625 PF02033 Ribosome-binding factor A Y_RS03630 PF09157 Pseudouridine synthase II TruB, C-terminal Y_RS03630 PF16198 tRNA pseudouridylate synthase B C-terminal domain Y_RS03630 PF01509 TruB family pseudouridylate synthase (N terminal domain) Y_RS03635 PF00312 Ribosomal protein S15 Y_RS03645 PF00665 Integrase core domain Y_RS03645 PF13333 Integrase core domain Y_RS03645 PF13276 HTH-like domain Y_RS03650 PF00575 S1 RNA binding domain Y_RS03650 PF03725 3' exoribonuclease family, domain 2 Y_RS03650 PF01138 3' exoribonuclease family, domain 1 Y_RS03650 PF00013 KH domain Y_RS03650 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Y_RS03655 PF13181 Tetratricopeptide repeat Y_RS03655 PF07719 Tetratricopeptide repeat Y_RS03660 PF00270 DEAD/DEAH box helicase Y_RS03660 PF12343 Cold shock protein DEAD box A Y_RS03660 PF03880 DbpA RNA binding domain Y_RS03660 PF00271 Helicase conserved C-terminal domain Y_RS03675 PF01381 Helix-turn-helix Y_RS03680 PF00296 Luciferase-like monooxygenase Y_RS03685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Y_RS03685 PF00529 HlyD membrane-fusion protein of T1SS Y_RS03690 PF00873 AcrB/AcrD/AcrF family Y_RS03695 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Y_RS03695 PF02321 Outer membrane efflux protein Y_RS03700 PF01136 Peptidase family U32 Y_RS03705 PF01136 Peptidase family U32 Y_RS03715 PF02036 SCP-2 sterol transfer family Y_RS03720 PF13508 Acetyltransferase (GNAT) domain Y_RS03725 PF01541 GIY-YIG catalytic domain Y_RS03740 PF13416 Bacterial extracellular solute-binding protein Y_RS03745 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS03750 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS03755 PF03459 TOBE domain Y_RS03755 PF17912 MalK OB fold domain Y_RS03755 PF00005 ABC transporter Y_RS03770 PF13460 NAD(P)H-binding Y_RS03775 PF12706 Beta-lactamase superfamily domain Y_RS03785 PF07969 Amidohydrolase family Y_RS03790 PF00005 ABC transporter Y_RS03795 PF00005 ABC transporter Y_RS03800 PF06007 Phosphonate metabolism protein PhnJ Y_RS03805 PF05861 Bacterial phosphonate metabolism protein (PhnI) Y_RS03810 PF05845 Bacterial phosphonate metabolism protein (PhnH) Y_RS03815 PF06754 Phosphonate metabolism protein PhnG Y_RS03820 PF00392 Bacterial regulatory proteins, gntR family Y_RS03820 PF07702 UTRA domain Y_RS03830 PF13597 Anaerobic ribonucleoside-triphosphate reductase Y_RS03830 PF03477 ATP cone domain Y_RS03835 PF00005 ABC transporter Y_RS03835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y_RS03840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y_RS03840 PF00005 ABC transporter Y_RS03845 PF12911 N-terminal TM domain of oligopeptide transport permease C Y_RS03845 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS03850 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS03860 PF04074 YhcH/YjgK/YiaL Y_RS03865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Y_RS03865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Y_RS03870 PF06877 Regulator of ribonuclease activity B Y_RS03875 PF00583 Acetyltransferase (GNAT) family Y_RS03880 PF10458 Valyl tRNA synthetase tRNA binding arm Y_RS03880 PF00133 tRNA synthetases class I (I, L, M and V) Y_RS03880 PF08264 Anticodon-binding domain of tRNA Y_RS03885 PF04364 DNA polymerase III chi subunit, HolC Y_RS03890 PF00883 Cytosol aminopeptidase family, catalytic domain Y_RS03890 PF02789 Cytosol aminopeptidase family, N-terminal domain Y_RS03895 PF03739 Lipopolysaccharide export system permease LptF/LptG Y_RS03900 PF03739 Lipopolysaccharide export system permease LptF/LptG Y_RS03910 PF00589 Phage integrase family Y_RS03910 PF13356 Arm DNA-binding domain Y_RS03920 PF08676 MutL C terminal dimerisation domain Y_RS03920 PF01119 DNA mismatch repair protein, C-terminal domain Y_RS03925 PF01695 IstB-like ATP binding protein Y_RS03930 PF00665 Integrase core domain Y_RS03930 PF02796 Helix-turn-helix domain of resolvase Y_RS03935 PF01797 Transposase IS200 like Y_RS03940 PF03884 DNA gyrase inhibitor YacG Y_RS03945 PF07072 Cell division protein Y_RS03950 PF01121 Dephospho-CoA kinase Y_RS03960 PF00478 IMP dehydrogenase / GMP reductase domain Y_RS03965 PF00482 Type II secretion system (T2SS), protein F Y_RS03970 PF00437 Type II/IV secretion system protein Y_RS03970 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Y_RS03975 PF07963 Prokaryotic N-terminal methylation motif Y_RS03980 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Y_RS03980 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Y_RS03985 PF01510 N-acetylmuramoyl-L-alanine amidase Y_RS03990 PF17113 Regulatory signalling modulator protein AmpE Y_RS03995 PF00324 Amino acid permease Y_RS04000 PF07729 FCD domain Y_RS04000 PF00392 Bacterial regulatory proteins, gntR family Y_RS04005 PF00456 Transketolase, thiamine diphosphate binding domain Y_RS04005 PF17831 Pyruvate dehydrogenase E1 component middle domain Y_RS04010 PF00364 Biotin-requiring enzyme Y_RS04010 PF02817 e3 binding domain Y_RS04010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Y_RS04015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y_RS04015 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS04025 PF01797 Transposase IS200 like Y_RS04030 PF11791 Aconitate B N-terminal domain Y_RS04030 PF00330 Aconitase family (aconitate hydratase) Y_RS04030 PF06434 Aconitate hydratase 2 N-terminus Y_RS04035 PF06062 Uncharacterised protein family (UPF0231) Y_RS04040 PF00892 EamA-like transporter family Y_RS04045 PF02675 S-adenosylmethionine decarboxylase Y_RS04050 PF17284 Spermidine synthase tetramerisation domain Y_RS04055 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) Y_RS04060 PF07731 Multicopper oxidase Y_RS04060 PF00394 Multicopper oxidase Y_RS04060 PF07732 Multicopper oxidase Y_RS04060 PF10518 TAT (twin-arginine translocation) pathway signal sequence Y_RS04065 PF00156 Phosphoribosyl transferase domain Y_RS04070 PF00484 Carbonic anhydrase Y_RS04075 PF00005 ABC transporter Y_RS04080 PF01061 ABC-2 type transporter Y_RS04090 PF02261 Aspartate decarboxylase Y_RS04095 PF02569 Pantoate-beta-alanine ligase Y_RS04100 PF02548 Ketopantoate hydroxymethyltransferase Y_RS04105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Y_RS04110 PF01743 Poly A polymerase head domain Y_RS04110 PF12626 Polymerase A arginine-rich C-terminus Y_RS04110 PF12627 Probable RNA and SrmB- binding site of polymerase A Y_RS04115 PF00749 tRNA synthetases class I (E and Q), catalytic domain Y_RS04120 PF01258 Prokaryotic dksA/traR C4-type zinc finger Y_RS04125 PF03749 Sugar fermentation stimulation protein RE domain Y_RS04125 PF17746 SfsA N-terminal OB domain Y_RS04130 PF02834 LigT like Phosphoesterase Y_RS04135 PF08482 ATP-dependent helicase C-terminal Y_RS04135 PF00271 Helicase conserved C-terminal domain Y_RS04135 PF04408 Helicase associated domain (HA2) Y_RS04135 PF00270 DEAD/DEAH box helicase Y_RS04140 PF14814 Bifunctional transglycosylase second domain Y_RS04140 PF00905 Penicillin binding protein transpeptidase domain Y_RS04140 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal Y_RS04140 PF00912 Transglycosylase Y_RS04145 PF00005 ABC transporter Y_RS04150 PF01497 Periplasmic binding protein Y_RS04155 PF01032 FecCD transport family Y_RS04160 PF00202 Aminotransferase class-III Y_RS04165 PF00654 Voltage gated chloride channel Y_RS04170 PF01521 Iron-sulphur cluster biosynthesis Y_RS04175 PF03458 UPF0126 domain Y_RS04180 PF01497 Periplasmic binding protein Y_RS04185 PF01048 Phosphorylase superfamily Y_RS04190 PF13286 Phosphohydrolase-associated domain Y_RS04190 PF01966 HD domain Y_RS04195 PF00595 PDZ domain Y_RS04200 PF00072 Response regulator receiver domain Y_RS04200 PF01627 Hpt domain Y_RS04200 PF00672 HAMP domain Y_RS04200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Y_RS04200 PF00512 His Kinase A (phospho-acceptor) domain Y_RS04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS04205 PF02824 TGS domain Y_RS04205 PF04607 Region found in RelA / SpoT proteins Y_RS04205 PF13291 ACT domain Y_RS04215 PF03819 MazG nucleotide pyrophosphohydrolase domain Y_RS04220 PF00117 Glutamine amidotransferase class-I Y_RS04220 PF06418 CTP synthase N-terminus Y_RS04225 PF03952 Enolase, N-terminal domain Y_RS04225 PF00113 Enolase, C-terminal TIM barrel domain Y_RS04230 PF00080 Copper/zinc superoxide dismutase (SODC) Y_RS04235 PF04055 Radical SAM superfamily Y_RS04240 PF01242 6-pyruvoyl tetrahydropterin synthase Y_RS04245 PF00667 FAD binding domain Y_RS04245 PF00258 Flavodoxin Y_RS04245 PF00175 Oxidoreductase NAD-binding domain Y_RS04250 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Y_RS04250 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Y_RS04280 PF01507 Phosphoadenosine phosphosulfate reductase family Y_RS04285 PF00009 Elongation factor Tu GTP binding domain Y_RS04295 PF12084 Protein of unknown function (DUF3561) Y_RS04300 PF04977 Septum formation initiator Y_RS04305 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Y_RS04310 PF02542 YgbB family Y_RS04315 PF01142 tRNA pseudouridine synthase D (TruD) Y_RS04320 PF01975 Survival protein SurE Y_RS04330 PF01476 LysM domain Y_RS04330 PF01551 Peptidase family M23 Y_RS04335 PF00140 Sigma-70 factor, region 1.2 Y_RS04335 PF04542 Sigma-70 region 2 Y_RS04335 PF04539 Sigma-70 region 3 Y_RS04335 PF04545 Sigma-70, region 4 Y_RS04340 PF05192 MutS domain III Y_RS04340 PF00488 MutS domain V Y_RS04340 PF01624 MutS domain I Y_RS04340 PF05188 MutS domain II Y_RS04340 PF05190 MutS family domain IV Y_RS04350 PF02502 Ribose/Galactose Isomerase Y_RS04355 PF08240 Alcohol dehydrogenase GroES-like domain Y_RS04355 PF00107 Zinc-binding dehydrogenase Y_RS04365 PF02733 Dak1 domain Y_RS04370 PF02734 DAK2 domain Y_RS04375 PF04198 Putative sugar-binding domain Y_RS04375 PF13936 Helix-turn-helix domain Y_RS04380 PF02040 Arsenical pump membrane protein Y_RS04385 PF01022 Bacterial regulatory protein, arsR family Y_RS04400 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS04405 PF14376 Haem-binding domain Y_RS04405 PF03150 Di-haem cytochrome c peroxidase Y_RS04405 PF00034 Cytochrome c Y_RS04415 PF07715 TonB-dependent Receptor Plug Domain Y_RS04415 PF00593 TonB dependent receptor Y_RS04430 PF00557 Metallopeptidase family M24 Y_RS04440 PF05683 Fumarase C-terminus Y_RS04440 PF05681 Fumarate hydratase (Fumerase) Y_RS04445 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y_RS04445 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y_RS04450 PF01261 Xylose isomerase-like TIM barrel Y_RS04455 PF02653 Branched-chain amino acid transport system / permease component Y_RS04460 PF02653 Branched-chain amino acid transport system / permease component Y_RS04465 PF00005 ABC transporter Y_RS04470 PF01797 Transposase IS200 like Y_RS04480 PF08220 DeoR-like helix-turn-helix domain Y_RS04480 PF00455 DeoR C terminal sensor domain Y_RS04485 PF00596 Class II Aldolase and Adducin N-terminal domain Y_RS04490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Y_RS04490 PF00384 Molybdopterin oxidoreductase Y_RS04490 PF01568 Molydopterin dinucleotide binding domain Y_RS04495 PF12800 4Fe-4S binding domain Y_RS04495 PF13247 4Fe-4S dicluster domain Y_RS04500 PF04976 DMSO reductase anchor subunit (DmsC) Y_RS04505 PF02613 Nitrate reductase delta subunit Y_RS04510 PF01292 Prokaryotic cytochrome b561 Y_RS04515 PF07361 Cytochrome b562 Y_RS04520 PF00141 Peroxidase Y_RS04525 PF13407 Periplasmic binding protein domain Y_RS04535 PF00005 ABC transporter Y_RS04540 PF02653 Branched-chain amino acid transport system / permease component Y_RS04545 PF00456 Transketolase, thiamine diphosphate binding domain Y_RS04550 PF02779 Transketolase, pyrimidine binding domain Y_RS04550 PF02780 Transketolase, C-terminal domain Y_RS04555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y_RS04555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y_RS04570 PF07690 Major Facilitator Superfamily Y_RS04575 PF02464 Competence-damaged protein Y_RS04580 PF00154 recA bacterial DNA recombination protein Y_RS04585 PF02631 RecX family Y_RS04590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Y_RS04590 PF02272 DHHA1 domain Y_RS04590 PF01411 tRNA synthetases class II (A) Y_RS04595 PF02599 Global regulator protein family Y_RS04620 PF13419 Haloacid dehalogenase-like hydrolase Y_RS04625 PF09335 SNARE associated Golgi protein Y_RS04630 PF04262 Glutamate-cysteine ligase Y_RS04635 PF02664 S-Ribosylhomocysteinase (LuxS) Y_RS04645 PF01797 Transposase IS200 like Y_RS04650 PF03471 Transporter associated domain Y_RS04650 PF01595 Cyclin M transmembrane N-terminal domain Y_RS04650 PF00571 CBS domain Y_RS04655 PF01578 Cytochrome C assembly protein Y_RS04660 PF02978 Signal peptide binding domain Y_RS04660 PF00448 SRP54-type protein, GTPase domain Y_RS04660 PF02881 SRP54-type protein, helical bundle domain Y_RS04665 PF00886 Ribosomal protein S16 Y_RS04670 PF05239 PRC-barrel domain Y_RS04670 PF01782 RimM N-terminal domain Y_RS04675 PF01746 tRNA (Guanine-1)-methyltransferase Y_RS04680 PF01245 Ribosomal protein L19 Y_RS04690 PF01797 Transposase IS200 like Y_RS04695 PF04338 Protein of unknown function, DUF481 Y_RS04700 PF03605 Anaerobic c4-dicarboxylate membrane transporter Y_RS04705 PF03605 Anaerobic c4-dicarboxylate membrane transporter Y_RS04710 PF03605 Anaerobic c4-dicarboxylate membrane transporter Y_RS04715 PF04397 LytTr DNA-binding domain Y_RS04715 PF00072 Response regulator receiver domain Y_RS04720 PF00793 DAHP synthetase I family Y_RS04725 PF01817 Chorismate mutase type II Y_RS04725 PF02153 Prephenate dehydrogenase Y_RS04730 PF01817 Chorismate mutase type II Y_RS04730 PF00800 Prephenate dehydratase Y_RS04735 PF01695 IstB-like ATP binding protein Y_RS04740 PF00665 Integrase core domain Y_RS04740 PF02796 Helix-turn-helix domain of resolvase Y_RS04745 PF01817 Chorismate mutase type II Y_RS04745 PF00800 Prephenate dehydratase Y_RS04750 PF01797 Transposase IS200 like Y_RS04755 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Y_RS04760 PF13525 Outer membrane lipoprotein Y_RS04765 PF00849 RNA pseudouridylate synthase Y_RS04765 PF01479 S4 domain Y_RS04770 PF02578 Multi-copper polyphenol oxidoreductase laccase Y_RS04775 PF02861 Clp amino terminal domain, pathogenicity island component Y_RS04775 PF07724 AAA domain (Cdc48 subfamily) Y_RS04775 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS04775 PF17871 AAA lid domain Y_RS04775 PF10431 C-terminal, D2-small domain, of ClpB protein Y_RS04815 PF10043 Predicted periplasmic lipoprotein (DUF2279) Y_RS04820 PF13091 PLD-like domain Y_RS04825 PF00583 Acetyltransferase (GNAT) family Y_RS04825 PF13380 CoA binding domain Y_RS04825 PF13607 Succinyl-CoA ligase like flavodoxin domain Y_RS04830 PF03942 DTW domain Y_RS04835 PF00085 Thioredoxin Y_RS04840 PF00588 SpoU rRNA Methylase family Y_RS04840 PF08032 RNA 2'-O ribose methyltransferase substrate binding Y_RS04845 PF07690 Major Facilitator Superfamily Y_RS04850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Y_RS04850 PF00529 HlyD membrane-fusion protein of T1SS Y_RS04855 PF01047 MarR family Y_RS04860 PF05437 Branched-chain amino acid transport protein (AzlD) Y_RS04865 PF03591 AzlC protein Y_RS04870 PF07690 Major Facilitator Superfamily Y_RS04880 PF01425 Amidase Y_RS04900 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS04915 PF00005 ABC transporter Y_RS04920 PF00266 Aminotransferase class-V Y_RS04925 PF01695 IstB-like ATP binding protein Y_RS04930 PF02796 Helix-turn-helix domain of resolvase Y_RS04930 PF00665 Integrase core domain Y_RS04935 PF00266 Aminotransferase class-V Y_RS04940 PF01546 Peptidase family M20/M25/M40 Y_RS04940 PF07687 Peptidase dimerisation domain Y_RS04945 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Y_RS04945 PF08479 POTRA domain, ShlB-type Y_RS04950 PF05860 haemagglutination activity domain Y_RS04960 PF18071 HMW1C N-terminal Y_RS04960 PF18254 HMW1 domain 2 Y_RS04970 PF09317 Domain of unknown function (DUF1974) Y_RS04970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Y_RS04970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Y_RS04975 PF13580 SIS domain Y_RS04980 PF13230 Glutamine amidotransferases class-II Y_RS04985 PF03734 L,D-transpeptidase catalytic domain Y_RS04990 PF11973 NQRA C-terminal domain Y_RS04990 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Y_RS04995 PF03116 NQR2, RnfD, RnfE family Y_RS05000 PF04205 FMN-binding domain Y_RS05005 PF02508 Rnf-Nqr subunit, membrane protein Y_RS05010 PF02508 Rnf-Nqr subunit, membrane protein Y_RS05015 PF00175 Oxidoreductase NAD-binding domain Y_RS05015 PF00111 2Fe-2S iron-sulfur cluster binding domain Y_RS05015 PF00970 Oxidoreductase FAD-binding domain Y_RS05020 PF02424 ApbE family Y_RS05030 PF03009 Glycerophosphoryl diester phosphodiesterase family Y_RS05035 PF11798 IMS family HHH motif Y_RS05035 PF00817 impB/mucB/samB family Y_RS05035 PF11799 impB/mucB/samB family C-terminal domain Y_RS05040 PF07687 Peptidase dimerisation domain Y_RS05040 PF01546 Peptidase family M20/M25/M40 Y_RS05065 PF00156 Phosphoribosyl transferase domain Y_RS05070 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) Y_RS05075 PF07417 Sigma factor-binding transcriptional regulator Crl Y_RS05080 PF00696 Amino acid kinase family Y_RS05080 PF01472 PUA domain Y_RS05085 PF00171 Aldehyde dehydrogenase family Y_RS05090 PF07238 PilZ domain Y_RS05090 PF07317 Flagellar regulator YcgR Y_RS05100 PF08241 Methyltransferase domain Y_RS05115 PF01202 Shikimate kinase Y_RS05125 PF06865 Pyrimidine/purine nucleoside phosphorylase Y_RS05130 PF04381 Putative exonuclease, RdgC Y_RS05135 PF00480 ROK family Y_RS05140 PF13476 AAA domain Y_RS05145 PF12320 Type 5 capsule protein repressor C-terminal domain Y_RS05145 PF00149 Calcineurin-like phosphoesterase Y_RS05155 PF00486 Transcriptional regulatory protein, C terminal Y_RS05155 PF00072 Response regulator receiver domain Y_RS05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS05160 PF00512 His Kinase A (phospho-acceptor) domain Y_RS05160 PF00989 PAS fold Y_RS05160 PF11808 Phosphate regulon sensor protein PhoR Y_RS05165 PF12849 PBP superfamily domain Y_RS05170 PF05525 Branched-chain amino acid transport protein Y_RS05175 PF00324 Amino acid permease Y_RS05180 PF00128 Alpha amylase, catalytic domain Y_RS05180 PF02903 Alpha amylase, N-terminal ig-like domain Y_RS05205 PF10417 C-terminal domain of 1-Cys peroxiredoxin Y_RS05205 PF00578 AhpC/TSA family Y_RS05210 PF04336 Acyl carrier protein phosphodiesterase Y_RS05215 PF02547 Queuosine biosynthesis protein Y_RS05220 PF01702 Queuine tRNA-ribosyltransferase Y_RS05225 PF02699 Preprotein translocase subunit Y_RS05230 PF07549 SecD/SecF GG Motif Y_RS05230 PF13721 SecD export protein N-terminal TM region Y_RS05230 PF02355 Protein export membrane protein Y_RS05235 PF02355 Protein export membrane protein Y_RS05235 PF07549 SecD/SecF GG Motif Y_RS05240 PF01797 Transposase IS200 like Y_RS05255 PF03477 ATP cone domain Y_RS05260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Y_RS05260 PF01872 RibD C-terminal domain Y_RS05265 PF00885 6,7-dimethyl-8-ribityllumazine synthase Y_RS05270 PF01029 NusB family Y_RS05275 PF00586 AIR synthase related protein, N-terminal domain Y_RS05275 PF02769 AIR synthase related protein, C-terminal domain Y_RS05280 PF04608 Phosphatidylglycerophosphatase A Y_RS05285 PF02796 Helix-turn-helix domain of resolvase Y_RS05285 PF00665 Integrase core domain Y_RS05290 PF01695 IstB-like ATP binding protein Y_RS05300 PF01797 Transposase IS200 like Y_RS05305 PF02779 Transketolase, pyrimidine binding domain Y_RS05305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Y_RS05305 PF02780 Transketolase, C-terminal domain Y_RS05310 PF00348 Polyprenyl synthetase Y_RS05315 PF02609 Exonuclease VII small subunit Y_RS05325 PF02926 THUMP domain Y_RS05325 PF02568 Thiamine biosynthesis protein (ThiI) Y_RS05330 PF01965 DJ-1/PfpI family Y_RS05335 PF02558 Ketopantoate reductase PanE/ApbA Y_RS05335 PF08546 Ketopantoate reductase PanE/ApbA C terminal Y_RS05340 PF04461 Protein of unknown function (DUF520) Y_RS05345 PF07690 Major Facilitator Superfamily Y_RS05350 PF01040 UbiA prenyltransferase family Y_RS05355 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Y_RS05360 PF00510 Cytochrome c oxidase subunit III Y_RS05365 PF00115 Cytochrome C and Quinol oxidase polypeptide I Y_RS05370 PF06481 COX Aromatic Rich Motif Y_RS05370 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Y_RS05375 PF03502 Nucleoside-specific channel-forming protein, Tsx Y_RS05380 PF07690 Major Facilitator Superfamily Y_RS05385 PF03923 Uncharacterized lipoprotein Y_RS05385 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Y_RS05390 PF01722 BolA-like protein Y_RS05400 PF05697 Bacterial trigger factor protein (TF) Y_RS05400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Y_RS05400 PF05698 Bacterial trigger factor protein (TF) C-terminus Y_RS05405 PF00574 Clp protease Y_RS05410 PF06689 ClpX C4-type zinc finger Y_RS05410 PF10431 C-terminal, D2-small domain, of ClpB protein Y_RS05410 PF07724 AAA domain (Cdc48 subfamily) Y_RS05415 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS05415 PF05362 Lon protease (S16) C-terminal proteolytic domain Y_RS05415 PF02190 ATP-dependent protease La (LON) substrate-binding domain Y_RS05420 PF00216 Bacterial DNA-binding protein Y_RS05425 PF13145 PPIC-type PPIASE domain Y_RS05440 PF06508 Queuosine biosynthesis protein QueC Y_RS05445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y_RS05445 PF12793 Sugar transport-related sRNA regulator N-term Y_RS05455 PF00291 Pyridoxal-phosphate dependent enzyme Y_RS05460 PF13404 AsnC-type helix-turn-helix domain Y_RS05460 PF01037 Lrp/AsnC ligand binding domain Y_RS05465 PF00005 ABC transporter Y_RS05465 PF00664 ABC transporter transmembrane region Y_RS05470 PF00005 ABC transporter Y_RS05470 PF00664 ABC transporter transmembrane region Y_RS05475 PF00543 Nitrogen regulatory protein P-II Y_RS05480 PF00909 Ammonium Transporter Family Y_RS05490 PF09619 Type III secretion system lipoprotein chaperone (YscW) Y_RS05495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Y_RS05500 PF05321 Haemolysin expression modulating protein Y_RS05505 PF10757 Biofilm formation regulator YbaJ Y_RS05515 PF00444 Ribosomal protein L36 Y_RS05520 PF01197 Ribosomal protein L31 Y_RS05525 PF00873 AcrB/AcrD/AcrF family Y_RS05530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Y_RS05530 PF00529 HlyD membrane-fusion protein of T1SS Y_RS05535 PF00440 Bacterial regulatory proteins, tetR family Y_RS05535 PF08361 MAATS-type transcriptional repressor, C-terminal region Y_RS05540 PF02635 DsrE/DsrF-like family Y_RS05545 PF00924 Mechanosensitive ion channel Y_RS05545 PF12794 Mechanosensitive ion channel inner membrane domain 1 Y_RS05545 PF12795 Mechanosensitive ion channel porin domain Y_RS05550 PF10689 Protein of unknown function (DUF2496) Y_RS05565 PF00156 Phosphoribosyl transferase domain Y_RS05570 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Y_RS05570 PF12170 DNA polymerase III tau subunit V interacting with alpha Y_RS05570 PF12169 DNA polymerase III subunits gamma and tau domain III Y_RS05575 PF02575 YbaB/EbfC DNA-binding family Y_RS05580 PF02132 RecR protein Y_RS05580 PF13662 Toprim domain Y_RS05585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS05585 PF00183 Hsp90 protein Y_RS05590 PF05191 Adenylate kinase, active site lid Y_RS05595 PF00762 Ferrochelatase Y_RS05600 PF00175 Oxidoreductase NAD-binding domain Y_RS05600 PF00111 2Fe-2S iron-sulfur cluster binding domain Y_RS05600 PF00970 Oxidoreductase FAD-binding domain Y_RS05605 PF00483 Nucleotidyl transferase Y_RS05610 PF16363 GDP-mannose 4,6 dehydratase Y_RS05615 PF16363 GDP-mannose 4,6 dehydratase Y_RS05620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Y_RS05625 PF01370 NAD dependent epimerase/dehydratase family Y_RS05655 PF00534 Glycosyl transferases group 1 Y_RS05655 PF13439 Glycosyltransferase Family 4 Y_RS05665 PF01370 NAD dependent epimerase/dehydratase family Y_RS05670 PF00483 Nucleotidyl transferase Y_RS05670 PF01050 Mannose-6-phosphate isomerase Y_RS05675 PF00535 Glycosyl transferase family 2 Y_RS05680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Y_RS05680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Y_RS05680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Y_RS05680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Y_RS05685 PF02706 Chain length determinant protein Y_RS05690 PF00294 pfkB family carbohydrate kinase Y_RS05695 PF02254 TrkA-N domain Y_RS05695 PF00999 Sodium/hydrogen exchanger family Y_RS05700 PF07690 Major Facilitator Superfamily Y_RS05705 PF00149 Calcineurin-like phosphoesterase Y_RS05705 PF02872 5'-nucleotidase, C-terminal domain Y_RS05710 PF00149 Calcineurin-like phosphoesterase Y_RS05710 PF02872 5'-nucleotidase, C-terminal domain Y_RS05715 PF02872 5'-nucleotidase, C-terminal domain Y_RS05715 PF00149 Calcineurin-like phosphoesterase Y_RS05730 PF04073 Aminoacyl-tRNA editing domain Y_RS05735 PF01963 TraB family Y_RS05740 PF00403 Heavy-metal-associated domain Y_RS05745 PF13411 MerR HTH family regulatory protein Y_RS05750 PF01957 NfeD-like C-terminal, partner-binding Y_RS05755 PF16200 C-terminal region of band_7 Y_RS05755 PF01145 SPFH domain / Band 7 family Y_RS05760 PF00085 Thioredoxin Y_RS05765 PF00106 short chain dehydrogenase Y_RS05770 PF13472 GDSL-like Lipase/Acylhydrolase family Y_RS05775 PF00005 ABC transporter Y_RS05785 PF02222 ATP-grasp domain Y_RS05785 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Y_RS05790 PF00731 AIR carboxylase Y_RS05795 PF00149 Calcineurin-like phosphoesterase Y_RS05800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Y_RS05805 PF09190 DALR domain Y_RS05805 PF01406 tRNA synthetases class I (C) catalytic domain Y_RS05815 PF01797 Transposase IS200 like Y_RS05825 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Y_RS05825 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Y_RS05870 PF01066 CDP-alcohol phosphatidyltransferase Y_RS05880 PF01553 Acyltransferase Y_RS05885 PF12146 Serine aminopeptidase, S33 Y_RS05885 PF12147 Putative methyltransferase Y_RS05890 PF00782 Dual specificity phosphatase, catalytic domain Y_RS05905 PF01695 IstB-like ATP binding protein Y_RS05910 PF02796 Helix-turn-helix domain of resolvase Y_RS05910 PF00665 Integrase core domain Y_RS05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS05915 PF03466 LysR substrate binding domain Y_RS05920 PF00248 Aldo/keto reductase family Y_RS05925 PF00248 Aldo/keto reductase family Y_RS05945 PF00933 Glycosyl hydrolase family 3 N terminal domain Y_RS05945 PF14310 Fibronectin type III-like domain Y_RS05945 PF01915 Glycosyl hydrolase family 3 C-terminal domain Y_RS05960 PF00872 Transposase, Mutator family Y_RS05965 PF08007 Cupin superfamily protein Y_RS05975 PF16168 Adhesin of bacterial autotransporter system, probable stalk Y_RS05975 PF03212 Pertactin Y_RS05975 PF03797 Autotransporter beta-domain Y_RS05975 PF13018 Extended Signal Peptide of Type V secretion system Y_RS05990 PF05638 Type VI secretion system effector, Hcp Y_RS06015 PF13693 Winged helix-turn-helix DNA-binding Y_RS06020 PF00905 Penicillin binding protein transpeptidase domain Y_RS06020 PF06832 Penicillin-Binding Protein C-terminus Family Y_RS06020 PF00912 Transglycosylase Y_RS06030 PF01797 Transposase IS200 like Y_RS06035 PF00207 Alpha-2-macroglobulin family Y_RS06035 PF11974 Bacterial alpha-2-macroglobulin MG3 domain Y_RS06035 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain Y_RS06035 PF17962 Bacterial macroglobulin domain 6 Y_RS06035 PF07703 Alpha-2-macroglobulin bait region domain Y_RS06035 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Y_RS06035 PF01835 MG2 domain Y_RS06050 PF00171 Aldehyde dehydrogenase family Y_RS06055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Y_RS06055 PF00205 Thiamine pyrophosphate enzyme, central domain Y_RS06055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Y_RS06065 PF13407 Periplasmic binding protein domain Y_RS06070 PF00005 ABC transporter Y_RS06075 PF02653 Branched-chain amino acid transport system / permease component Y_RS06080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Y_RS06080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Y_RS06085 PF00294 pfkB family carbohydrate kinase Y_RS06090 PF01261 Xylose isomerase-like TIM barrel Y_RS06095 PF04962 KduI/IolB family Y_RS06105 PF00664 ABC transporter transmembrane region Y_RS06105 PF00005 ABC transporter Y_RS06130 PF00196 Bacterial regulatory proteins, luxR family Y_RS06135 PF00313 'Cold-shock' DNA-binding domain Y_RS06140 PF00313 'Cold-shock' DNA-binding domain Y_RS06145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Y_RS06155 PF02416 mttA/Hcf106 family Y_RS06160 PF04055 Radical SAM superfamily Y_RS06160 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Y_RS06165 PF03099 Biotin/lipoate A/B protein ligase family Y_RS06170 PF04359 Protein of unknown function (DUF493) Y_RS06175 PF00768 D-alanyl-D-alanine carboxypeptidase Y_RS06175 PF07943 Penicillin-binding protein 5, C-terminal domain Y_RS06180 PF05036 Sporulation related domain Y_RS06180 PF03330 Lytic transglycolase Y_RS06185 PF01098 Cell cycle protein Y_RS06190 PF03717 Penicillin-binding Protein dimerisation domain Y_RS06190 PF00905 Penicillin binding protein transpeptidase domain Y_RS06195 PF02590 Predicted SPOUT methyltransferase Y_RS06205 PF01467 Cytidylyltransferase-like Y_RS06210 PF06144 DNA polymerase III, delta subunit Y_RS06210 PF14840 Processivity clamp loader gamma complex DNA pol III C-term Y_RS06215 PF04390 Lipopolysaccharide-assembly Y_RS06220 PF08264 Anticodon-binding domain of tRNA Y_RS06220 PF00133 tRNA synthetases class I (I, L, M and V) Y_RS06220 PF13603 Leucyl-tRNA synthetase, Domain 2 Y_RS06225 PF07295 Zinc-ribbon containing domain Y_RS06230 PF00005 ABC transporter Y_RS06235 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS06240 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS06245 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS06250 PF00795 Carbon-nitrogen hydrolase Y_RS06255 PF00571 CBS domain Y_RS06255 PF03471 Transporter associated domain Y_RS06260 PF02130 Uncharacterized protein family UPF0054 Y_RS06265 PF02562 PhoH-like protein Y_RS06270 PF01938 TRAM domain Y_RS06270 PF04055 Radical SAM superfamily Y_RS06270 PF00919 Uncharacterized protein family UPF0004 Y_RS06275 PF01494 FAD binding domain Y_RS06315 PF00733 Asparagine synthase Y_RS06315 PF13537 Glutamine amidotransferase domain Y_RS06320 PF13344 Haloacid dehalogenase-like hydrolase Y_RS06325 PF01047 MarR family Y_RS06325 PF00480 ROK family Y_RS06330 PF01979 Amidohydrolase family Y_RS06335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Y_RS06340 PF02378 Phosphotransferase system, EIIC Y_RS06340 PF00367 phosphotransferase system, EIIB Y_RS06340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Y_RS06345 PF01797 Transposase IS200 like Y_RS06350 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Y_RS06350 PF00749 tRNA synthetases class I (E and Q), catalytic domain Y_RS06355 PF03573 outer membrane porin, OprD family Y_RS06365 PF01475 Ferric uptake regulator family Y_RS06370 PF00258 Flavodoxin Y_RS06375 PF01402 Ribbon-helix-helix protein, copG family Y_RS06385 PF12697 Alpha/beta hydrolase family Y_RS06395 PF00589 Phage integrase family Y_RS06395 PF13356 Arm DNA-binding domain Y_RS06400 PF01527 Transposase Y_RS06405 PF13356 Arm DNA-binding domain Y_RS06405 PF00589 Phage integrase family Y_RS06410 PF01695 IstB-like ATP binding protein Y_RS06415 PF00665 Integrase core domain Y_RS06415 PF02796 Helix-turn-helix domain of resolvase Y_RS06425 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Y_RS06430 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS06435 PF00005 ABC transporter Y_RS06435 PF00571 CBS domain Y_RS06440 PF00268 Ribonucleotide reductase, small chain Y_RS06445 PF02867 Ribonucleotide reductase, barrel domain Y_RS06445 PF00317 Ribonucleotide reductase, all-alpha domain Y_RS06445 PF08343 Ribonucleotide reductase N-terminal Y_RS06460 PF06392 Acid shock protein repeat Y_RS06465 PF09400 Protein of unknown function (DUF2002) Y_RS06470 PF06711 Protein of unknown function (DUF1198) Y_RS06480 PF00313 'Cold-shock' DNA-binding domain Y_RS06485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y_RS06490 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS06495 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS06495 PF12911 N-terminal TM domain of oligopeptide transport permease C Y_RS06500 PF00005 ABC transporter Y_RS06505 PF00005 ABC transporter Y_RS06510 PF00547 Urease, gamma subunit Y_RS06515 PF00699 Urease beta subunit Y_RS06520 PF01979 Amidohydrolase family Y_RS06520 PF00449 Urease alpha-subunit, N-terminal domain Y_RS06525 PF02814 UreE urease accessory protein, N-terminal domain Y_RS06525 PF05194 UreE urease accessory protein, C-terminal domain Y_RS06530 PF01730 UreF Y_RS06535 PF02492 CobW/HypB/UreG, nucleotide-binding domain Y_RS06540 PF01774 UreD urease accessory protein Y_RS06545 PF03253 Urea transporter Y_RS06550 PF03824 High-affinity nickel-transport protein Y_RS06555 PF06411 HdeA/HdeB family Y_RS06565 PF07885 Ion channel Y_RS06565 PF02254 TrkA-N domain Y_RS06570 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Y_RS06575 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Y_RS06585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Y_RS06590 PF02378 Phosphotransferase system, EIIC Y_RS06595 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Y_RS06600 PF07883 Cupin domain Y_RS06600 PF12833 Helix-turn-helix domain Y_RS06605 PF04794 YdjC-like protein Y_RS06620 PF17206 SeqA protein N-terminal domain Y_RS06620 PF03925 SeqA protein C-terminal domain Y_RS06625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Y_RS06625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Y_RS06625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Y_RS06625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Y_RS06645 PF00072 Response regulator receiver domain Y_RS06645 PF00486 Transcriptional regulatory protein, C terminal Y_RS06650 PF02702 Osmosensitive K+ channel His kinase sensor domain Y_RS06650 PF00512 His Kinase A (phospho-acceptor) domain Y_RS06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS06650 PF13492 GAF domain Y_RS06650 PF13493 Domain of unknown function (DUF4118) Y_RS06655 PF02669 K+-transporting ATPase, c chain Y_RS06665 PF03814 Potassium-transporting ATPase A subunit Y_RS06680 PF10725 Protein of unknown function (DUF2517) Y_RS06685 PF08349 Protein of unknown function (DUF1722) Y_RS06690 PF00875 DNA photolyase Y_RS06690 PF03441 FAD binding domain of DNA photolyase Y_RS06695 PF02112 cAMP phosphodiesterases class-II Y_RS06700 PF01784 NIF3 (NGG1p interacting factor 3) Y_RS06710 PF02626 Carboxyltransferase domain, subdomain A and B Y_RS06715 PF03746 LamB/YcsF family Y_RS06735 PF01470 Pyroglutamyl peptidase Y_RS06740 PF03167 Uracil DNA glycosylase superfamily Y_RS06745 PF01228 Glycine radical Y_RS06760 PF12796 Ankyrin repeats (3 copies) Y_RS06765 PF00271 Helicase conserved C-terminal domain Y_RS06765 PF00270 DEAD/DEAH box helicase Y_RS06770 PF05175 Methyltransferase small domain Y_RS06775 PF00890 FAD binding domain Y_RS06775 PF02910 Fumarate reductase flavoprotein C-term Y_RS06780 PF08281 Sigma-70, region 4 Y_RS06780 PF04542 Sigma-70 region 2 Y_RS06785 PF03872 Anti sigma-E protein RseA, N-terminal domain Y_RS06785 PF03873 Anti sigma-E protein RseA, C-terminal domain Y_RS06790 PF03888 MucB/RseB N-terminal domain Y_RS06790 PF17188 MucB/RseB C-terminal domain Y_RS06805 PF03144 Elongation factor Tu domain 2 Y_RS06805 PF00679 Elongation factor G C-terminus Y_RS06805 PF06421 GTP-binding protein LepA C-terminus Y_RS06805 PF00009 Elongation factor Tu GTP binding domain Y_RS06810 PF10502 Signal peptidase, peptidase S26 Y_RS06815 PF00035 Double-stranded RNA binding motif Y_RS06815 PF14622 Ribonuclease-III-like Y_RS06820 PF01926 50S ribosome-binding GTPase Y_RS06820 PF07650 KH domain Y_RS06825 PF11967 Recombination protein O N terminal Y_RS06825 PF02565 Recombination protein O C terminal Y_RS06830 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Y_RS06835 PF01648 4'-phosphopantetheinyl transferase superfamily Y_RS06845 PF01797 Transposase IS200 like Y_RS06850 PF12838 4Fe-4S dicluster domain Y_RS06855 PF01418 Helix-turn-helix domain, rpiR family Y_RS06855 PF01380 SIS domain Y_RS06860 PF01380 SIS domain Y_RS06870 PF14437 MafB19-like deaminase Y_RS06875 PF01464 Transglycosylase SLT domain Y_RS06875 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS06880 PF02769 AIR synthase related protein, C-terminal domain Y_RS06880 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Y_RS06880 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Y_RS06900 PF01797 Transposase IS200 like Y_RS06905 PF00512 His Kinase A (phospho-acceptor) domain Y_RS06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS06910 PF13942 YfhG lipoprotein Y_RS06915 PF00158 Sigma-54 interaction domain Y_RS06915 PF00072 Response regulator receiver domain Y_RS06920 PF02540 NAD synthase Y_RS06920 PF00795 Carbon-nitrogen hydrolase Y_RS06925 PF00543 Nitrogen regulatory protein P-II Y_RS06930 PF14503 YhfZ C-terminal domain Y_RS06930 PF14502 Helix-turn-helix domain Y_RS06935 PF14503 YhfZ C-terminal domain Y_RS06935 PF14502 Helix-turn-helix domain Y_RS06940 PF00665 Integrase core domain Y_RS06940 PF02796 Helix-turn-helix domain of resolvase Y_RS06945 PF01695 IstB-like ATP binding protein Y_RS06950 PF00970 Oxidoreductase FAD-binding domain Y_RS06950 PF00042 Globin Y_RS06950 PF00175 Oxidoreductase NAD-binding domain Y_RS06955 PF00464 Serine hydroxymethyltransferase Y_RS06965 PF13505 Outer membrane protein beta-barrel domain Y_RS06970 PF12832 MFS_1 like family Y_RS06975 PF00874 PRD domain Y_RS06980 PF06226 Protein of unknown function (DUF1007) Y_RS06985 PF03824 High-affinity nickel-transport protein Y_RS06990 PF00459 Inositol monophosphatase family Y_RS06995 PF00588 SpoU rRNA Methylase family Y_RS07000 PF02082 Transcriptional regulator Y_RS07005 PF00266 Aminotransferase class-V Y_RS07010 PF01592 NifU-like N terminal domain Y_RS07015 PF01521 Iron-sulphur cluster biosynthesis Y_RS07020 PF07743 HSCB C-terminal oligomerisation domain Y_RS07020 PF00226 DnaJ domain Y_RS07025 PF00012 Hsp70 protein Y_RS07030 PF00111 2Fe-2S iron-sulfur cluster binding domain Y_RS07035 PF04384 Iron-sulphur cluster assembly Y_RS07040 PF12404 Peptidase Y_RS07040 PF00883 Cytosol aminopeptidase family, catalytic domain Y_RS07045 PF07179 SseB protein N-terminal domain Y_RS07045 PF14581 SseB protein C-terminal domain Y_RS07055 PF03212 Pertactin Y_RS07055 PF03797 Autotransporter beta-domain Y_RS07055 PF16168 Adhesin of bacterial autotransporter system, probable stalk Y_RS07060 PF16168 Adhesin of bacterial autotransporter system, probable stalk Y_RS07060 PF03797 Autotransporter beta-domain Y_RS07060 PF03212 Pertactin Y_RS07075 PF00334 Nucleoside diphosphate kinase Y_RS07080 PF04055 Radical SAM superfamily Y_RS07090 PF13464 Domain of unknown function (DUF4115) Y_RS07095 PF04551 GcpE protein Y_RS07100 PF13393 Histidyl-tRNA synthetase Y_RS07100 PF03129 Anticodon binding domain Y_RS07105 PF09976 Tetratricopeptide repeat-like domain Y_RS07110 PF13360 PQQ-like domain Y_RS07115 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Y_RS07115 PF01926 50S ribosome-binding GTPase Y_RS07125 PF07191 zinc-ribbons Y_RS07130 PF13742 OB-fold nucleic acid binding domain Y_RS07130 PF02601 Exonuclease VII, large subunit Y_RS07135 PF00571 CBS domain Y_RS07135 PF00478 IMP dehydrogenase / GMP reductase domain Y_RS07145 PF02540 NAD synthase Y_RS07145 PF00958 GMP synthase C terminal domain Y_RS07145 PF00117 Glutamine amidotransferase class-I Y_RS07155 PF01797 Transposase IS200 like Y_RS07160 PF05638 Type VI secretion system effector, Hcp Y_RS07190 PF00872 Transposase, Mutator family Y_RS07205 PF08543 Phosphomethylpyrimidine kinase Y_RS07220 PF00781 Diacylglycerol kinase catalytic domain Y_RS07225 PF16325 Peptidase family U32 C-terminal domain Y_RS07225 PF01136 Peptidase family U32 Y_RS07230 PF07411 Domain of unknown function (DUF1508) Y_RS07235 PF00486 Transcriptional regulatory protein, C terminal Y_RS07235 PF00072 Response regulator receiver domain Y_RS07240 PF00672 HAMP domain Y_RS07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS07240 PF00512 His Kinase A (phospho-acceptor) domain Y_RS07245 PF00672 HAMP domain Y_RS07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS07245 PF00512 His Kinase A (phospho-acceptor) domain Y_RS07250 PF07690 Major Facilitator Superfamily Y_RS07255 PF00873 AcrB/AcrD/AcrF family Y_RS07260 PF00873 AcrB/AcrD/AcrF family Y_RS07265 PF13533 Biotin-lipoyl like Y_RS07270 PF00005 ABC transporter Y_RS07270 PF08402 TOBE domain Y_RS07275 PF00392 Bacterial regulatory proteins, gntR family Y_RS07275 PF00155 Aminotransferase class I and II Y_RS07280 PF00202 Aminotransferase class-III Y_RS07290 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS07295 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS07300 PF00012 Hsp70 protein Y_RS07305 PF00571 CBS domain Y_RS07305 PF03448 MgtE intracellular N domain Y_RS07305 PF01769 Divalent cation transporter Y_RS07315 PF02541 Ppx/GppA phosphatase family Y_RS07320 PF02503 Polyphosphate kinase middle domain Y_RS07320 PF13090 Polyphosphate kinase C-terminal domain 2 Y_RS07320 PF17941 Polyphosphate kinase C-terminal domain 1 Y_RS07320 PF13089 Polyphosphate kinase N-terminal domain Y_RS07325 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS07330 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS07335 PF00005 ABC transporter Y_RS07350 PF13302 Acetyltransferase (GNAT) domain Y_RS07355 PF00551 Formyl transferase Y_RS07360 PF00586 AIR synthase related protein, N-terminal domain Y_RS07360 PF02769 AIR synthase related protein, C-terminal domain Y_RS07370 PF01797 Transposase IS200 like Y_RS07375 PF00308 Bacterial dnaA protein Y_RS07380 PF03960 ArsC family Y_RS07385 PF07720 Tetratricopeptide repeat Y_RS07385 PF01435 Peptidase family M48 Y_RS07390 PF01594 AI-2E family transporter Y_RS07410 PF00578 AhpC/TSA family Y_RS07415 PF01842 ACT domain Y_RS07420 PF00701 Dihydrodipicolinate synthetase family Y_RS07425 PF06804 NlpB/DapX lipoprotein Y_RS07435 PF01797 Transposase IS200 like Y_RS07440 PF01259 SAICAR synthetase Y_RS07445 PF04228 Putative neutral zinc metallopeptidase Y_RS07450 PF04284 Protein of unknown function (DUF441) Y_RS07455 PF08351 Domain of unknown function (DUF1726) Y_RS07455 PF13718 GNAT acetyltransferase 2 Y_RS07455 PF05127 Helicase Y_RS07455 PF17176 tRNA-binding domain Y_RS07460 PF13980 Uncharacterised protein family (UPF0370) Y_RS07465 PF02557 D-alanyl-D-alanine carboxypeptidase Y_RS07470 PF01546 Peptidase family M20/M25/M40 Y_RS07470 PF07687 Peptidase dimerisation domain Y_RS07475 PF03960 ArsC family Y_RS07490 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS07495 PF08402 TOBE domain Y_RS07495 PF00005 ABC transporter Y_RS07500 PF00884 Sulfatase Y_RS07505 PF13186 Iron-sulfur cluster-binding domain Y_RS07505 PF04055 Radical SAM superfamily Y_RS07510 PF04307 LexA-binding, inner membrane-associated putative hydrolase Y_RS07520 PF00873 AcrB/AcrD/AcrF family Y_RS07530 PF00072 Response regulator receiver domain Y_RS07530 PF00196 Bacterial regulatory proteins, luxR family Y_RS07535 PF13187 4Fe-4S dicluster domain Y_RS07535 PF12800 4Fe-4S binding domain Y_RS07535 PF00037 4Fe-4S binding domain Y_RS07540 PF03927 NapD protein Y_RS07550 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Y_RS07555 PF03264 NapC/NirT cytochrome c family, N-terminal region Y_RS07560 PF00293 NUDIX domain Y_RS07565 PF03949 Malic enzyme, NAD binding domain Y_RS07565 PF01515 Phosphate acetyl/butaryl transferase Y_RS07565 PF00390 Malic enzyme, N-terminal domain Y_RS07570 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Y_RS07575 PF01218 Coproporphyrinogen III oxidase Y_RS07580 PF00583 Acetyltransferase (GNAT) family Y_RS07595 PF13018 Extended Signal Peptide of Type V secretion system Y_RS07595 PF16168 Adhesin of bacterial autotransporter system, probable stalk Y_RS07595 PF03212 Pertactin Y_RS07595 PF03797 Autotransporter beta-domain Y_RS07600 PF04076 Bacterial OB fold (BOF) protein Y_RS07605 PF06572 Protein of unknown function (DUF1131) Y_RS07610 PF04261 Dyp-type peroxidase family Y_RS07615 PF00701 Dihydrodipicolinate synthetase family Y_RS07620 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase Y_RS07625 PF12468 Type III secretion system leucine rich repeat protein Y_RS07630 PF00480 ROK family Y_RS07635 PF04074 YhcH/YjgK/YiaL Y_RS07645 PF01418 Helix-turn-helix domain, rpiR family Y_RS07645 PF01380 SIS domain Y_RS07650 PF07690 Major Facilitator Superfamily Y_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS07670 PF00005 ABC transporter Y_RS07675 PF00291 Pyridoxal-phosphate dependent enzyme Y_RS07685 PF00072 Response regulator receiver domain Y_RS07685 PF00486 Transcriptional regulatory protein, C terminal Y_RS07690 PF00672 HAMP domain Y_RS07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS07690 PF00512 His Kinase A (phospho-acceptor) domain Y_RS07700 PF00155 Aminotransferase class I and II Y_RS07710 PF00557 Metallopeptidase family M24 Y_RS07720 PF00474 Sodium:solute symporter family Y_RS07725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y_RS07725 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS07730 PF02687 FtsX-like permease family Y_RS07730 PF12704 MacB-like periplasmic core domain Y_RS07730 PF00005 ABC transporter Y_RS07735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Y_RS07740 PF00486 Transcriptional regulatory protein, C terminal Y_RS07740 PF00072 Response regulator receiver domain Y_RS07745 PF16527 Two-component sensor protein CpxA, periplasmic domain Y_RS07745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS07745 PF00672 HAMP domain Y_RS07745 PF00512 His Kinase A (phospho-acceptor) domain Y_RS07755 PF01797 Transposase IS200 like Y_RS07760 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Y_RS07765 PF05524 PEP-utilising enzyme, N-terminal Y_RS07765 PF00391 PEP-utilising enzyme, mobile domain Y_RS07765 PF02896 PEP-utilising enzyme, TIM barrel domain Y_RS07770 PF00381 PTS HPr component phosphorylation site Y_RS07775 PF00291 Pyridoxal-phosphate dependent enzyme Y_RS07785 PF04354 ZipA, C-terminal FtsZ-binding domain Y_RS07790 PF01653 NAD-dependent DNA ligase adenylation domain Y_RS07790 PF00533 BRCA1 C Terminus (BRCT) domain Y_RS07790 PF12826 Helix-hairpin-helix motif Y_RS07790 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Y_RS07790 PF03120 NAD-dependent DNA ligase OB-fold domain Y_RS07795 PF12843 Putative quorum-sensing-regulated virulence factor Y_RS07820 PF01797 Transposase IS200 like Y_RS07825 PF00749 tRNA synthetases class I (E and Q), catalytic domain Y_RS07850 PF01773 Na+ dependent nucleoside transporter N-terminus Y_RS07850 PF07662 Na+ dependent nucleoside transporter C-terminus Y_RS07850 PF07670 Nucleoside recognition Y_RS07855 PF01566 Natural resistance-associated macrophage protein Y_RS07865 PF00248 Aldo/keto reductase family Y_RS07870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS07870 PF03466 LysR substrate binding domain Y_RS07880 PF02685 Glucokinase Y_RS07885 PF07350 Protein of unknown function (DUF1479) Y_RS07890 PF00155 Aminotransferase class I and II Y_RS07895 PF01292 Prokaryotic cytochrome b561 Y_RS07905 PF03783 Curli production assembly/transport component CsgG Y_RS07915 PF05643 Putative bacterial lipoprotein (DUF799) Y_RS07925 PF02613 Nitrate reductase delta subunit Y_RS07930 PF04976 DMSO reductase anchor subunit (DmsC) Y_RS07935 PF12800 4Fe-4S binding domain Y_RS07935 PF13247 4Fe-4S dicluster domain Y_RS07940 PF00384 Molybdopterin oxidoreductase Y_RS07940 PF01568 Molydopterin dinucleotide binding domain Y_RS07940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Y_RS07950 PF05638 Type VI secretion system effector, Hcp Y_RS07960 PF00005 ABC transporter Y_RS07965 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS07975 PF13406 Transglycosylase SLT domain Y_RS08020 PF05947 Type VI secretion system, TssF Y_RS08025 PF10431 C-terminal, D2-small domain, of ClpB protein Y_RS08025 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS08025 PF17871 AAA lid domain Y_RS08025 PF07724 AAA domain (Cdc48 subfamily) Y_RS08030 PF16970 Type-1 fimbrial protein, A Y_RS08035 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS08035 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS08040 PF13953 PapC C-terminal domain Y_RS08040 PF13954 PapC N-terminal domain Y_RS08040 PF00577 Outer membrane usher protein Y_RS08045 PF00872 Transposase, Mutator family Y_RS08050 PF13953 PapC C-terminal domain Y_RS08050 PF13954 PapC N-terminal domain Y_RS08050 PF00577 Outer membrane usher protein Y_RS08060 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 Y_RS08065 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Y_RS08080 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE Y_RS08090 PF00665 Integrase core domain Y_RS08090 PF02796 Helix-turn-helix domain of resolvase Y_RS08095 PF01695 IstB-like ATP binding protein Y_RS08105 PF06761 Intracellular multiplication and human macrophage-killing Y_RS08105 PF14331 ImcF-related N-terminal domain Y_RS08105 PF06744 Type VI secretion protein IcmF C-terminal Y_RS08110 PF06715 Gp5 C-terminal repeat (3 copies) Y_RS08110 PF04717 Type VI secretion system, phage-baseplate injector Y_RS08125 PF07024 ImpE protein Y_RS08140 PF08274 PhnA Zinc-Ribbon Y_RS08140 PF03831 PhnA domain Y_RS08150 PF04011 LemA family Y_RS08165 PF00005 ABC transporter Y_RS08170 PF03379 CcmB protein Y_RS08175 PF01578 Cytochrome C assembly protein Y_RS08180 PF04995 Heme exporter protein D (CcmD) Y_RS08185 PF03100 CcmE Y_RS08190 PF01578 Cytochrome C assembly protein Y_RS08190 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Y_RS08195 PF08534 Redoxin Y_RS08200 PF03918 Cytochrome C biogenesis protein Y_RS08205 PF03918 Cytochrome C biogenesis protein Y_RS08210 PF04333 MlaA lipoprotein Y_RS08215 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Y_RS08220 PF04175 Protein of unknown function (DUF406) Y_RS08225 PF00108 Thiolase, N-terminal domain Y_RS08225 PF02803 Thiolase, C-terminal domain Y_RS08230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Y_RS08230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Y_RS08230 PF00378 Enoyl-CoA hydratase/isomerase Y_RS08235 PF00300 Histidine phosphatase superfamily (branch 1) Y_RS08240 PF01713 Smr domain Y_RS08245 PF05175 Methyltransferase small domain Y_RS08250 PF01264 Chorismate synthase Y_RS08255 PF03411 Penicillin-insensitive murein endopeptidase Y_RS08260 PF01925 Sulfite exporter TauE/SafE Y_RS08265 PF04315 Elongation factor P hydroxylase Y_RS08270 PF08891 YfcL protein Y_RS08275 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Y_RS08275 PF01266 FAD dependent oxidoreductase Y_RS08280 PF00109 Beta-ketoacyl synthase, N-terminal domain Y_RS08280 PF02801 Beta-ketoacyl synthase, C-terminal domain Y_RS08285 PF01177 Asp/Glu/Hydantoin racemase Y_RS08290 PF00419 Fimbrial protein Y_RS08300 PF00892 EamA-like transporter family Y_RS08315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y_RS08315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Y_RS08315 PF11890 Domain of unknown function (DUF3410) Y_RS08320 PF01118 Semialdehyde dehydrogenase, NAD binding domain Y_RS08320 PF02774 Semialdehyde dehydrogenase, dimerisation domain Y_RS08325 PF01416 tRNA pseudouridine synthase Y_RS08330 PF09335 SNARE associated Golgi protein Y_RS08335 PF01039 Carboxyl transferase domain Y_RS08335 PF17848 Acetyl-coA carboxylase zinc finger domain Y_RS08340 PF02875 Mur ligase family, glutamate ligase domain Y_RS08340 PF08245 Mur ligase middle domain Y_RS08345 PF05036 Sporulation related domain Y_RS08350 PF02674 Colicin V production protein Y_RS08355 PF00156 Phosphoribosyl transferase domain Y_RS08360 PF02441 Flavoprotein Y_RS08365 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS08370 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS08375 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS08380 PF00005 ABC transporter Y_RS08385 PF01370 NAD dependent epimerase/dehydratase family Y_RS08385 PF08338 Domain of unknown function (DUF1731) Y_RS08395 PF12850 Calcineurin-like phosphoesterase superfamily domain Y_RS08400 PF00293 NUDIX domain Y_RS08405 PF03611 PTS system sugar-specific permease component Y_RS08410 PF00872 Transposase, Mutator family Y_RS08420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Y_RS08425 PF00356 Bacterial regulatory proteins, lacI family Y_RS08425 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Y_RS08430 PF01515 Phosphate acetyl/butaryl transferase Y_RS08430 PF07085 DRTGG domain Y_RS08435 PF00871 Acetokinase family Y_RS08445 PF04217 Protein of unknown function, DUF412 Y_RS08450 PF03887 YfbU domain Y_RS08455 PF13419 Haloacid dehalogenase-like hydrolase Y_RS08460 PF02080 TrkA-C domain Y_RS08460 PF03600 Citrate transporter Y_RS08475 PF00155 Aminotransferase class I and II Y_RS08485 PF03466 LysR substrate binding domain Y_RS08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS08490 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Y_RS08495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Y_RS08500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Y_RS08500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Y_RS08510 PF10531 SLBB domain Y_RS08510 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Y_RS08510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Y_RS08515 PF01568 Molydopterin dinucleotide binding domain Y_RS08515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Y_RS08515 PF00384 Molybdopterin oxidoreductase Y_RS08515 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Y_RS08520 PF00146 NADH dehydrogenase Y_RS08525 PF12838 4Fe-4S dicluster domain Y_RS08530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Y_RS08535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Y_RS08540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Y_RS08540 PF00361 Proton-conducting membrane transporter Y_RS08545 PF00361 Proton-conducting membrane transporter Y_RS08550 PF00361 Proton-conducting membrane transporter Y_RS08565 PF00106 short chain dehydrogenase Y_RS08570 PF01202 Shikimate kinase Y_RS08580 PF02638 Glycosyl hydrolase-like 10 Y_RS08585 PF00356 Bacterial regulatory proteins, lacI family Y_RS08595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Y_RS08595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y_RS08600 PF07690 Major Facilitator Superfamily Y_RS08605 PF03928 Haem-degrading Y_RS08610 PF00920 Dehydratase family Y_RS08625 PF05957 Bacterial protein of unknown function (DUF883) Y_RS08635 PF00425 chorismate binding enzyme Y_RS08640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Y_RS08640 PF16582 Middle domain of thiamine pyrophosphate Y_RS08640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Y_RS08645 PF12697 Alpha/beta hydrolase family Y_RS08650 PF00378 Enoyl-CoA hydratase/isomerase Y_RS08655 PF13378 Enolase C-terminal domain-like Y_RS08660 PF13193 AMP-binding enzyme C-terminal domain Y_RS08660 PF00501 AMP-binding enzyme Y_RS08665 PF02885 Glycosyl transferase family, helical bundle domain Y_RS08670 PF07338 Protein of unknown function (DUF1471) Y_RS08675 PF05971 RNA methyltransferase Y_RS08685 PF01695 IstB-like ATP binding protein Y_RS08690 PF00665 Integrase core domain Y_RS08690 PF02796 Helix-turn-helix domain of resolvase Y_RS08695 PF13426 PAS domain Y_RS08695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y_RS08695 PF08447 PAS fold Y_RS08700 PF00005 ABC transporter Y_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS08710 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS08720 PF00210 Ferritin-like domain Y_RS08725 PF13649 Methyltransferase domain Y_RS08735 PF00892 EamA-like transporter family Y_RS08740 PF13505 Outer membrane protein beta-barrel domain Y_RS08760 PF08240 Alcohol dehydrogenase GroES-like domain Y_RS08760 PF00107 Zinc-binding dehydrogenase Y_RS08765 PF13407 Periplasmic binding protein domain Y_RS08770 PF00005 ABC transporter Y_RS08775 PF02653 Branched-chain amino acid transport system / permease component Y_RS08780 PF00356 Bacterial regulatory proteins, lacI family Y_RS08785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS08785 PF03466 LysR substrate binding domain Y_RS08790 PF00180 Isocitrate/isopropylmalate dehydrogenase Y_RS08800 PF02028 BCCT, betaine/carnitine/choline family transporter Y_RS08810 PF00111 2Fe-2S iron-sulfur cluster binding domain Y_RS08810 PF00970 Oxidoreductase FAD-binding domain Y_RS08810 PF00175 Oxidoreductase NAD-binding domain Y_RS08815 PF08479 POTRA domain, ShlB-type Y_RS08815 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Y_RS08815 PF17287 POTRA domain Y_RS08820 PF05860 haemagglutination activity domain Y_RS08820 PF13018 Extended Signal Peptide of Type V secretion system Y_RS08820 PF13332 Hemagglutinin repeat Y_RS08820 PF04829 Pre-toxin domain with VENN motif Y_RS08840 PF13332 Hemagglutinin repeat Y_RS08840 PF04829 Pre-toxin domain with VENN motif Y_RS08840 PF05860 haemagglutination activity domain Y_RS08840 PF13018 Extended Signal Peptide of Type V secretion system Y_RS08860 PF05594 Haemagluttinin repeat Y_RS08860 PF13332 Hemagglutinin repeat Y_RS08860 PF05860 haemagglutination activity domain Y_RS08860 PF15526 Novel toxin 21 Y_RS08860 PF04829 Pre-toxin domain with VENN motif Y_RS08870 PF00005 ABC transporter Y_RS08870 PF17912 MalK OB fold domain Y_RS08875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Y_RS08875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Y_RS08875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Y_RS08875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Y_RS08880 PF00356 Bacterial regulatory proteins, lacI family Y_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS08895 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS08900 PF04041 beta-1,4-mannooligosaccharide phosphorylase Y_RS08920 PF00924 Mechanosensitive ion channel Y_RS08925 PF01867 CRISPR associated protein Cas1 Y_RS08935 PF09611 CRISPR-associated protein (Cas_Csy1) Y_RS08940 PF09614 CRISPR-associated protein (Cas_Csy2) Y_RS08945 PF09615 CRISPR-associated protein (Cas_Csy3) Y_RS08950 PF09618 CRISPR-associated protein (Cas_Csy4) Y_RS08955 PF00248 Aldo/keto reductase family Y_RS08965 PF00083 Sugar (and other) transporter Y_RS08975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS08975 PF03466 LysR substrate binding domain Y_RS08980 PF00196 Bacterial regulatory proteins, luxR family Y_RS08980 PF03472 Autoinducer binding domain Y_RS08985 PF00765 Autoinducer synthase Y_RS09010 PF17773 UPF0176 acylphosphatase like domain Y_RS09010 PF12368 Rhodanase C-terminal Y_RS09010 PF00581 Rhodanese-like domain Y_RS09015 PF01594 AI-2E family transporter Y_RS09020 PF00196 Bacterial regulatory proteins, luxR family Y_RS09025 PF01266 FAD dependent oxidoreductase Y_RS09030 PF00872 Transposase, Mutator family Y_RS09035 PF03992 Antibiotic biosynthesis monooxygenase Y_RS09040 PF01979 Amidohydrolase family Y_RS09045 PF06183 DinI-like family Y_RS09055 PF13991 BssS protein family Y_RS09060 PF00872 Transposase, Mutator family Y_RS09065 PF00575 S1 RNA binding domain Y_RS09065 PF10150 Ribonuclease E/G family Y_RS09065 PF12111 Polyribonucleotide phosphorylase C terminal Y_RS09070 PF01479 S4 domain Y_RS09070 PF00849 RNA pseudouridylate synthase Y_RS09075 PF02545 Maf-like protein Y_RS09080 PF02620 Large ribosomal RNA subunit accumulation protein YceD Y_RS09085 PF01783 Ribosomal L32p protein family Y_RS09090 PF02504 Fatty acid synthesis protein Y_RS09095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Y_RS09095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Y_RS09100 PF00698 Acyl transferase domain Y_RS09110 PF00550 Phosphopantetheine attachment site Y_RS09115 PF02801 Beta-ketoacyl synthase, C-terminal domain Y_RS09115 PF00109 Beta-ketoacyl synthase, N-terminal domain Y_RS09120 PF01797 Transposase IS200 like Y_RS09125 PF01063 Amino-transferase class IV Y_RS09130 PF02618 YceG-like family Y_RS09135 PF02223 Thymidylate kinase Y_RS09140 PF09115 DNA polymerase III, delta subunit, C terminal Y_RS09145 PF01026 TatD related DNase Y_RS09150 PF02378 Phosphotransferase system, EIIC Y_RS09150 PF00367 phosphotransferase system, EIIB Y_RS09155 PF01797 Transposase IS200 like Y_RS09160 PF08501 Shikimate dehydrogenase substrate binding domain Y_RS09165 PF01230 HIT domain Y_RS09170 PF07233 Protein of unknown function (DUF1425) Y_RS09175 PF13036 Peptidoglycan-synthase activator LpoB Y_RS09175 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Y_RS09180 PF01636 Phosphotransferase enzyme family Y_RS09185 PF00933 Glycosyl hydrolase family 3 N terminal domain Y_RS09190 PF05728 Uncharacterised protein family (UPF0227) Y_RS09195 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS09210 PF00872 Transposase, Mutator family Y_RS09215 PF05433 Glycine zipper 2TM domain Y_RS09220 PF17757 UvrB interaction domain Y_RS09220 PF02559 CarD-like/TRCF domain Y_RS09220 PF00270 DEAD/DEAH box helicase Y_RS09220 PF03461 TRCF domain Y_RS09220 PF00271 Helicase conserved C-terminal domain Y_RS09225 PF02687 FtsX-like permease family Y_RS09225 PF12704 MacB-like periplasmic core domain Y_RS09230 PF00005 ABC transporter Y_RS09235 PF02687 FtsX-like permease family Y_RS09235 PF12704 MacB-like periplasmic core domain Y_RS09240 PF00480 ROK family Y_RS09245 PF02146 Sir2 family Y_RS09250 PF01546 Peptidase family M20/M25/M40 Y_RS09250 PF07687 Peptidase dimerisation domain Y_RS09255 PF08007 Cupin superfamily protein Y_RS09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS09260 PF08918 PhoQ Sensor Y_RS09265 PF00486 Transcriptional regulatory protein, C terminal Y_RS09265 PF00072 Response regulator receiver domain Y_RS09280 PF00206 Lyase Y_RS09280 PF08328 Adenylosuccinate lyase C-terminal Y_RS09285 PF04356 Protein of unknown function (DUF489) Y_RS09295 PF00293 NUDIX domain Y_RS09300 PF00849 RNA pseudouridylate synthase Y_RS09305 PF00180 Isocitrate/isopropylmalate dehydrogenase Y_RS09310 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Y_RS09310 PF00356 Bacterial regulatory proteins, lacI family Y_RS09320 PF08447 PAS fold Y_RS09320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y_RS09325 PF05368 NmrA-like family Y_RS09330 PF01638 HxlR-like helix-turn-helix Y_RS09340 PF00328 Histidine phosphatase superfamily (branch 2) Y_RS09345 PF14001 YdfZ protein Y_RS09355 PF01037 Lrp/AsnC ligand binding domain Y_RS09355 PF13404 AsnC-type helix-turn-helix domain Y_RS09360 PF10777 Inner membrane protein YlaC Y_RS09365 PF08659 KR domain Y_RS09365 PF00550 Phosphopantetheine attachment site Y_RS09365 PF00109 Beta-ketoacyl synthase, N-terminal domain Y_RS09365 PF00107 Zinc-binding dehydrogenase Y_RS09365 PF08240 Alcohol dehydrogenase GroES-like domain Y_RS09365 PF00698 Acyl transferase domain Y_RS09365 PF16197 Ketoacyl-synthetase C-terminal extension Y_RS09365 PF14765 Polyketide synthase dehydratase Y_RS09365 PF02801 Beta-ketoacyl synthase, C-terminal domain Y_RS09370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Y_RS09370 PF16353 Domain of unknown function(DUF4981) Y_RS09370 PF02929 Beta galactosidase small chain Y_RS09370 PF00703 Glycosyl hydrolases family 2 Y_RS09370 PF02837 Glycosyl hydrolases family 2, sugar binding domain Y_RS09375 PF00313 'Cold-shock' DNA-binding domain Y_RS09380 PF10781 Dextransucrase DSRB Y_RS09395 PF02308 MgtC family Y_RS09400 PF00690 Cation transporter/ATPase, N-terminus Y_RS09400 PF00689 Cation transporting ATPase, C-terminus Y_RS09410 PF05280 Flagellar transcriptional activator (FlhC) Y_RS09415 PF01618 MotA/TolQ/ExbB proton channel family Y_RS09420 PF00691 OmpA family Y_RS09420 PF13677 Membrane MotB of proton-channel complex MotA/MotB Y_RS09425 PF01584 CheW-like domain Y_RS09425 PF02895 Signal transducing histidine kinase, homodimeric domain Y_RS09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS09425 PF01627 Hpt domain Y_RS09425 PF09078 CheY binding Y_RS09430 PF01584 CheW-like domain Y_RS09435 PF07690 Major Facilitator Superfamily Y_RS09440 PF01042 Endoribonuclease L-PSP Y_RS09450 PF08348 YheO-like PAS domain Y_RS09450 PF13309 HTH domain Y_RS09470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y_RS09470 PF02203 Tar ligand binding domain homologue Y_RS09470 PF00672 HAMP domain Y_RS09475 PF02203 Tar ligand binding domain homologue Y_RS09475 PF00672 HAMP domain Y_RS09475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y_RS09480 PF03705 CheR methyltransferase, all-alpha domain Y_RS09480 PF01739 CheR methyltransferase, SAM binding domain Y_RS09485 PF01339 CheB methylesterase Y_RS09485 PF00072 Response regulator receiver domain Y_RS09490 PF00072 Response regulator receiver domain Y_RS09495 PF04344 Chemotaxis phosphatase, CheZ Y_RS09505 PF01510 N-acetylmuramoyl-L-alanine amidase Y_RS09510 PF13018 Extended Signal Peptide of Type V secretion system Y_RS09510 PF03895 YadA-like membrane anchor domain Y_RS09510 PF05658 Head domain of trimeric autotransporter adhesin Y_RS09510 PF05662 Coiled stalk of trimeric autotransporter adhesin Y_RS09515 PF03895 YadA-like membrane anchor domain Y_RS09515 PF05658 Head domain of trimeric autotransporter adhesin Y_RS09515 PF05662 Coiled stalk of trimeric autotransporter adhesin Y_RS09515 PF13018 Extended Signal Peptide of Type V secretion system Y_RS09525 PF00842 Alanine racemase, C-terminal domain Y_RS09525 PF01168 Alanine racemase, N-terminal domain Y_RS09550 PF01695 IstB-like ATP binding protein Y_RS09555 PF02796 Helix-turn-helix domain of resolvase Y_RS09555 PF00665 Integrase core domain Y_RS09565 PF07351 Protein of unknown function (DUF1480) Y_RS09580 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS09580 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS09600 PF02470 MlaD protein Y_RS09605 PF04403 Paraquat-inducible protein A Y_RS09610 PF13185 GAF domain Y_RS09615 PF17516 ProQ C-terminal domain Y_RS09615 PF04352 ProQ/FINO family Y_RS09620 PF17804 Tail specific protease N-terminal domain Y_RS09620 PF00595 PDZ domain Y_RS09620 PF11818 C-terminal domain of tail specific protease (DUF3340) Y_RS09620 PF03572 Peptidase family S41 Y_RS09625 PF01435 Peptidase family M48 Y_RS09630 PF00419 Fimbrial protein Y_RS09635 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS09635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS09640 PF13953 PapC C-terminal domain Y_RS09640 PF13954 PapC N-terminal domain Y_RS09640 PF00577 Outer membrane usher protein Y_RS09650 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS09650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS09655 PF07690 Major Facilitator Superfamily Y_RS09660 PF14583 Oligogalacturonate lyase Y_RS09665 PF09339 IclR helix-turn-helix domain Y_RS09665 PF01614 Bacterial transcriptional regulator Y_RS09670 PF01510 N-acetylmuramoyl-L-alanine amidase Y_RS09675 PF00375 Sodium:dicarboxylate symporter family Y_RS09680 PF04307 LexA-binding, inner membrane-associated putative hydrolase Y_RS09685 PF06178 Oligogalacturonate-specific porin protein (KdgM) Y_RS09690 PF01547 Bacterial extracellular solute-binding protein Y_RS09695 PF00005 ABC transporter Y_RS09695 PF03459 TOBE domain Y_RS09695 PF17912 MalK OB fold domain Y_RS09700 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS09710 PF06917 Periplasmic pectate lyase Y_RS09720 PF04962 KduI/IolB family Y_RS09725 PF07883 Cupin domain Y_RS09730 PF00872 Transposase, Mutator family Y_RS09735 PF13419 Haloacid dehalogenase-like hydrolase Y_RS09740 PF14002 YniB-like protein Y_RS09745 PF03881 Fructosamine kinase Y_RS09755 PF00950 ABC 3 transport family Y_RS09760 PF00950 ABC 3 transport family Y_RS09765 PF00005 ABC transporter Y_RS09770 PF01297 Zinc-uptake complex component A periplasmic Y_RS09775 PF01464 Transglycosylase SLT domain Y_RS09780 PF01914 MarC family integral membrane protein Y_RS09795 PF13619 KTSC domain Y_RS09800 PF03129 Anticodon binding domain Y_RS09800 PF02824 TGS domain Y_RS09800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Y_RS09800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Y_RS09805 PF00707 Translation initiation factor IF-3, C-terminal domain Y_RS09805 PF05198 Translation initiation factor IF-3, N-terminal domain Y_RS09810 PF01632 Ribosomal protein L35 Y_RS09815 PF00453 Ribosomal protein L20 Y_RS09820 PF01409 tRNA synthetases class II core domain (F) Y_RS09820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Y_RS09825 PF03484 tRNA synthetase B5 domain Y_RS09825 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Y_RS09825 PF01588 Putative tRNA binding domain Y_RS09825 PF03147 Ferredoxin-fold anticodon binding domain Y_RS09825 PF03483 B3/4 domain Y_RS09830 PF00216 Bacterial DNA-binding protein Y_RS09840 PF01032 FecCD transport family Y_RS09845 PF00255 Glutathione peroxidase Y_RS09850 PF00005 ABC transporter Y_RS09855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Y_RS09860 PF00535 Glycosyl transferase family 2 Y_RS09865 PF01370 NAD dependent epimerase/dehydratase family Y_RS09865 PF02911 Formyl transferase, C-terminal domain Y_RS09865 PF00551 Formyl transferase Y_RS09870 PF01522 Polysaccharide deacetylase Y_RS09875 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Y_RS09880 PF00892 EamA-like transporter family Y_RS09890 PF00877 NlpC/P60 family Y_RS09895 PF10437 Bacterial lipoate protein ligase C-terminus Y_RS09895 PF03099 Biotin/lipoate A/B protein ligase family Y_RS09905 PF00793 DAHP synthetase I family Y_RS09910 PF03618 Kinase/pyrophosphorylase Y_RS09915 PF00391 PEP-utilising enzyme, mobile domain Y_RS09915 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Y_RS09915 PF02896 PEP-utilising enzyme, TIM barrel domain Y_RS09920 PF01594 AI-2E family transporter Y_RS09925 PF13183 4Fe-4S dicluster domain Y_RS09925 PF02913 FAD linked oxidases, C-terminal domain Y_RS09925 PF01565 FAD binding domain Y_RS09930 PF03061 Thioesterase superfamily Y_RS09940 PF01521 Iron-sulphur cluster biosynthesis Y_RS09945 PF01458 Uncharacterized protein family (UPF0051) Y_RS09950 PF00005 ABC transporter Y_RS09955 PF01458 Uncharacterized protein family (UPF0051) Y_RS09960 PF00266 Aminotransferase class-V Y_RS09965 PF02657 Fe-S metabolism associated domain Y_RS09970 PF03734 L,D-transpeptidase catalytic domain Y_RS09970 PF01476 LysM domain Y_RS09970 PF17969 L,D-transpeptidase C-terminal domain Y_RS09975 PF01695 IstB-like ATP binding protein Y_RS09980 PF02796 Helix-turn-helix domain of resolvase Y_RS09980 PF00665 Integrase core domain Y_RS09985 PF01797 Transposase IS200 like Y_RS09995 PF04728 Lipoprotein leucine-zipper Y_RS10000 PF02887 Pyruvate kinase, alpha/beta domain Y_RS10000 PF00224 Pyruvate kinase, barrel domain Y_RS10015 PF01554 MatE Y_RS10020 PF00677 Lumazine binding domain Y_RS10030 PF07690 Major Facilitator Superfamily Y_RS10035 PF03466 LysR substrate binding domain Y_RS10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS10040 PF00356 Bacterial regulatory proteins, lacI family Y_RS10045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Y_RS10045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Y_RS10050 PF00877 NlpC/P60 family Y_RS10060 PF00462 Glutaredoxin Y_RS10065 PF00929 Exonuclease Y_RS10070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Y_RS10075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Y_RS10080 PF16925 Tetracyclin repressor-like, C-terminal domain Y_RS10080 PF00440 Bacterial regulatory proteins, tetR family Y_RS10085 PF08019 Phosphoethanolamine transferase EptA/EptB Y_RS10085 PF00884 Sulfatase Y_RS10090 PF01047 MarR family Y_RS10095 PF05433 Glycine zipper 2TM domain Y_RS10100 PF03702 Anhydro-N-acetylmuramic acid kinase Y_RS10105 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme Y_RS10110 PF01243 Pyridoxamine 5'-phosphate oxidase Y_RS10110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Y_RS10115 PF01479 S4 domain Y_RS10115 PF00579 tRNA synthetases class I (W and Y) Y_RS10120 PF08543 Phosphomethylpyrimidine kinase Y_RS10125 PF00043 Glutathione S-transferase, C-terminal domain Y_RS10125 PF02798 Glutathione S-transferase, N-terminal domain Y_RS10130 PF11656 YjbD family (DUF3811) Y_RS10135 PF04893 Yip1 domain Y_RS10140 PF00854 POT family Y_RS10150 PF00005 ABC transporter Y_RS10155 PF00005 ABC transporter Y_RS10155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y_RS10160 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS10160 PF12911 N-terminal TM domain of oligopeptide transport permease C Y_RS10165 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS10170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y_RS10185 PF01797 Transposase IS200 like Y_RS10190 PF02954 Bacterial regulatory protein, Fis family Y_RS10190 PF00158 Sigma-54 interaction domain Y_RS10195 PF04012 PspA/IM30 family Y_RS10200 PF06667 Phage shock protein B Y_RS10205 PF04024 PspC domain Y_RS10215 PF04317 YcjX-like family, DUF463 Y_RS10220 PF05128 Domain of unknown function (DUF697) Y_RS10225 PF08808 RES domain Y_RS10230 PF09722 Protein of unknown function (DUF2384) Y_RS10235 PF18024 Helix-turn-helix domain Y_RS10235 PF00158 Sigma-54 interaction domain Y_RS10240 PF01797 Transposase IS200 like Y_RS10245 PF08534 Redoxin Y_RS10250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Y_RS10250 PF13378 Enolase C-terminal domain-like Y_RS10255 PF00246 Zinc carboxypeptidase Y_RS10260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y_RS10265 PF01544 CorA-like Mg2+ transporter protein Y_RS10275 PF07859 alpha/beta hydrolase fold Y_RS10280 PF01171 PP-loop family Y_RS10285 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Y_RS10285 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Y_RS10285 PF10371 Domain of unknown function Y_RS10285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Y_RS10285 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Y_RS10290 PF00893 Small Multidrug Resistance protein Y_RS10295 PF02308 MgtC family Y_RS10300 PF03891 Domain of unknown function (DUF333) Y_RS10305 PF03724 META domain Y_RS10310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y_RS10310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Y_RS10315 PF11739 Dicarboxylate transport Y_RS10320 PF13617 YnbE-like lipoprotein Y_RS10325 PF07027 Protein of unknown function (DUF1318) Y_RS10330 PF01232 Mannitol dehydrogenase Rossmann domain Y_RS10330 PF08125 Mannitol dehydrogenase C-terminal domain Y_RS10335 PF04198 Putative sugar-binding domain Y_RS10335 PF00325 Bacterial regulatory proteins, crp family Y_RS10340 PF02525 Flavodoxin-like fold Y_RS10345 PF00271 Helicase conserved C-terminal domain Y_RS10345 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Y_RS10345 PF00270 DEAD/DEAH box helicase Y_RS10345 PF04408 Helicase associated domain (HA2) Y_RS10345 PF11898 Domain of unknown function (DUF3418) Y_RS10360 PF00089 Trypsin Y_RS10390 PF18807 Tripartite Tc toxins repeat Y_RS10390 PF14431 YwqJ-like deaminase Y_RS10400 PF01695 IstB-like ATP binding protein Y_RS10405 PF00665 Integrase core domain Y_RS10405 PF02796 Helix-turn-helix domain of resolvase Y_RS10410 PF00465 Iron-containing alcohol dehydrogenase Y_RS10410 PF00171 Aldehyde dehydrogenase family Y_RS10415 PF01914 MarC family integral membrane protein Y_RS10420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y_RS10425 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS10430 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS10430 PF12911 N-terminal TM domain of oligopeptide transport permease C Y_RS10435 PF00005 ABC transporter Y_RS10435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y_RS10440 PF00005 ABC transporter Y_RS10440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y_RS10455 PF04269 Protein of unknown function, DUF440 Y_RS10460 PF13396 Phospholipase_D-nuclease N-terminal Y_RS10460 PF13091 PLD-like domain Y_RS10465 PF13505 Outer membrane protein beta-barrel domain Y_RS10480 PF03795 YCII-related domain Y_RS10485 PF03544 Gram-negative bacterial TonB protein C-terminal Y_RS10490 PF00872 Transposase, Mutator family Y_RS10495 PF03061 Thioesterase superfamily Y_RS10500 PF04279 Intracellular septation protein A Y_RS10525 PF03922 OmpW family Y_RS10535 PF00290 Tryptophan synthase alpha chain Y_RS10540 PF00291 Pyridoxal-phosphate dependent enzyme Y_RS10545 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Y_RS10545 PF00218 Indole-3-glycerol phosphate synthase Y_RS10550 PF00591 Glycosyl transferase family, a/b domain Y_RS10550 PF02885 Glycosyl transferase family, helical bundle domain Y_RS10555 PF00117 Glutamine amidotransferase class-I Y_RS10560 PF04715 Anthranilate synthase component I, N terminal region Y_RS10560 PF00425 chorismate binding enzyme Y_RS10575 PF02811 PHP domain Y_RS10580 PF01300 Telomere recombination Y_RS10585 PF00849 RNA pseudouridylate synthase Y_RS10585 PF01479 S4 domain Y_RS10590 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Y_RS10595 PF00106 short chain dehydrogenase Y_RS10600 PF08496 Peptidase family S49 N-terminal Y_RS10600 PF01343 Peptidase family S49 Y_RS10605 PF10692 Protein of unknown function (DUF2498) Y_RS10615 PF08272 Topoisomerase I zinc-ribbon-like Y_RS10615 PF01751 Toprim domain Y_RS10615 PF01396 Topoisomerase DNA binding C4 zinc finger Y_RS10615 PF01131 DNA topoisomerase Y_RS10620 PF03466 LysR substrate binding domain Y_RS10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS10630 PF00694 Aconitase C-terminal domain Y_RS10630 PF00330 Aconitase family (aconitate hydratase) Y_RS10635 PF00925 GTP cyclohydrolase II Y_RS10640 PF01569 PAP2 superfamily Y_RS10645 PF06305 Lipopolysaccharide assembly protein A domain Y_RS10650 PF18073 Rubredoxin metal binding domain Y_RS10660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Y_RS10665 PF01253 Translation initiation factor SUI1 Y_RS10670 PF05433 Glycine zipper 2TM domain Y_RS10675 PF00596 Class II Aldolase and Adducin N-terminal domain Y_RS10685 PF00923 Transaldolase/Fructose-6-phosphate aldolase Y_RS10690 PF04328 Selenoprotein, putative Y_RS10695 PF13722 5TM C-terminal transporter carbon starvation CstA Y_RS10695 PF02554 Carbon starvation protein CstA Y_RS10700 PF08206 Ribonuclease B OB domain Y_RS10700 PF00575 S1 RNA binding domain Y_RS10700 PF00773 RNB domain Y_RS10700 PF17876 Cold shock domain Y_RS10705 PF07690 Major Facilitator Superfamily Y_RS10710 PF01370 NAD dependent epimerase/dehydratase family Y_RS10715 PF00730 HhH-GPD superfamily base excision DNA repair protein Y_RS10715 PF00633 Helix-hairpin-helix motif Y_RS10715 PF10576 Iron-sulfur binding domain of endonuclease III Y_RS10720 PF02508 Rnf-Nqr subunit, membrane protein Y_RS10725 PF04205 FMN-binding domain Y_RS10730 PF03116 NQR2, RnfD, RnfE family Y_RS10735 PF12833 Helix-turn-helix domain Y_RS10735 PF06445 GyrI-like small molecule binding domain Y_RS10740 PF10531 SLBB domain Y_RS10740 PF13375 RnfC Barrel sandwich hybrid domain Y_RS10740 PF13237 4Fe-4S dicluster domain Y_RS10740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Y_RS10745 PF04060 Putative Fe-S cluster Y_RS10750 PF02508 Rnf-Nqr subunit, membrane protein Y_RS10755 PF10754 Protein of unknown function (DUF2569) Y_RS10760 PF00664 ABC transporter transmembrane region Y_RS10760 PF00005 ABC transporter Y_RS10760 PF03412 Peptidase C39 family Y_RS10765 PF00664 ABC transporter transmembrane region Y_RS10765 PF00005 ABC transporter Y_RS10770 PF13533 Biotin-lipoyl like Y_RS10780 PF00664 ABC transporter transmembrane region Y_RS10780 PF00005 ABC transporter Y_RS10780 PF03412 Peptidase C39 family Y_RS10785 PF02610 L-arabinose isomerase Y_RS10785 PF11762 L-arabinose isomerase C-terminal domain Y_RS10790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y_RS10795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Y_RS10800 PF00005 ABC transporter Y_RS10805 PF02653 Branched-chain amino acid transport system / permease component Y_RS10810 PF02311 AraC-like ligand binding domain Y_RS10810 PF12833 Helix-turn-helix domain Y_RS10815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Y_RS10815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Y_RS10820 PF13593 SBF-like CPA transporter family (DUF4137) Y_RS10830 PF06097 Bacterial protein of unknown function (DUF945) Y_RS10835 PF01238 Phosphomannose isomerase type I Y_RS10840 PF10415 Fumarase C C-terminus Y_RS10840 PF00206 Lyase Y_RS10845 PF05472 DNA replication terminus site-binding protein (Ter protein) Y_RS10855 PF03466 LysR substrate binding domain Y_RS10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS10860 PF00480 ROK family Y_RS10870 PF00654 Voltage gated chloride channel Y_RS10880 PF00356 Bacterial regulatory proteins, lacI family Y_RS10890 PF13407 Periplasmic binding protein domain Y_RS10895 PF09084 NMT1/THI5 like Y_RS10900 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS10905 PF00005 ABC transporter Y_RS10910 PF01048 Phosphorylase superfamily Y_RS10910 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Y_RS10935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Y_RS10935 PF00205 Thiamine pyrophosphate enzyme, central domain Y_RS10935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Y_RS10940 PF01842 ACT domain Y_RS10945 PF13419 Haloacid dehalogenase-like hydrolase Y_RS10960 PF00245 Alkaline phosphatase Y_RS10965 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Y_RS10965 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Y_RS10970 PF13545 Crp-like helix-turn-helix domain Y_RS10970 PF00027 Cyclic nucleotide-binding domain Y_RS10975 PF00582 Universal stress protein family Y_RS10980 PF02233 NAD(P) transhydrogenase beta subunit Y_RS10985 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Y_RS10985 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Y_RS10985 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Y_RS10995 PF07338 Protein of unknown function (DUF1471) Y_RS11000 PF13520 Amino acid permease Y_RS11010 PF00072 Response regulator receiver domain Y_RS11010 PF00486 Transcriptional regulatory protein, C terminal Y_RS11015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS11015 PF00512 His Kinase A (phospho-acceptor) domain Y_RS11015 PF00672 HAMP domain Y_RS11020 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Y_RS11025 PF01797 Transposase IS200 like Y_RS11030 PF02796 Helix-turn-helix domain of resolvase Y_RS11030 PF00665 Integrase core domain Y_RS11035 PF01695 IstB-like ATP binding protein Y_RS11040 PF00265 Thymidine kinase Y_RS11045 PF00816 H-NS histone family Y_RS11050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Y_RS11050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Y_RS11050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Y_RS11055 PF00072 Response regulator receiver domain Y_RS11060 PF02810 SEC-C motif Y_RS11070 PF00872 Transposase, Mutator family Y_RS11080 PF03466 LysR substrate binding domain Y_RS11080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS11085 PF03372 Endonuclease/Exonuclease/phosphatase family Y_RS11090 PF00293 NUDIX domain Y_RS11095 PF07383 Protein of unknown function (DUF1496) Y_RS11100 PF01131 DNA topoisomerase Y_RS11100 PF01751 Toprim domain Y_RS11105 PF02769 AIR synthase related protein, C-terminal domain Y_RS11105 PF00586 AIR synthase related protein, N-terminal domain Y_RS11110 PF00881 Nitroreductase family Y_RS11115 PF01343 Peptidase family S49 Y_RS11120 PF00710 Asparaginase, N-terminal Y_RS11120 PF17763 Glutaminase/Asparaginase C-terminal domain Y_RS11125 PF00857 Isochorismatase family Y_RS11130 PF07023 Protein of unknown function (DUF1315) Y_RS11135 PF01641 SelR domain Y_RS11140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Y_RS11140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Y_RS11145 PF01263 Aldose 1-epimerase Y_RS11150 PF06629 MltA-interacting protein MipA Y_RS11155 PF06798 PrkA serine protein kinase C-terminal domain Y_RS11155 PF08298 PrkA AAA domain Y_RS11160 PF04285 Protein of unknown function (DUF444) Y_RS11170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS11170 PF03466 LysR substrate binding domain Y_RS11175 PF02678 Pirin Y_RS11175 PF05726 Pirin C-terminal cupin domain Y_RS11180 PF07690 Major Facilitator Superfamily Y_RS11185 PF01266 FAD dependent oxidoreductase Y_RS11190 PF04293 SpoVR like protein Y_RS11195 PF07840 FadR C-terminal domain Y_RS11195 PF00392 Bacterial regulatory proteins, gntR family Y_RS11205 PF02600 Disulfide bond formation protein DsbB Y_RS11220 PF00266 Aminotransferase class-V Y_RS11230 PF00872 Transposase, Mutator family Y_RS11240 PF02413 Caudovirales tail fibre assembly protein, lambda gpK Y_RS11395 PF00872 Transposase, Mutator family Y_RS11460 PF06530 Phage antitermination protein Q Y_RS11470 PF05772 NinB protein Y_RS11485 PF01695 IstB-like ATP binding protein Y_RS11490 PF00665 Integrase core domain Y_RS11490 PF02796 Helix-turn-helix domain of resolvase Y_RS11495 PF00589 Phage integrase family Y_RS11495 PF12167 Arm DNA-binding domain Y_RS11500 PF03692 Putative zinc- or iron-chelating domain Y_RS11505 PF01557 Fumarylacetoacetate (FAA) hydrolase family Y_RS11510 PF13406 Transglycosylase SLT domain Y_RS11515 PF05166 YcgL domain Y_RS11520 PF05209 Septum formation inhibitor MinC, N-terminal domain Y_RS11520 PF03775 Septum formation inhibitor MinC, C-terminal domain Y_RS11525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Y_RS11530 PF03776 Septum formation topological specificity factor MinE Y_RS11535 PF01612 3'-5' exonuclease Y_RS11535 PF00570 HRDC domain Y_RS11540 PF13193 AMP-binding enzyme C-terminal domain Y_RS11540 PF00501 AMP-binding enzyme Y_RS11545 PF03843 Outer membrane lipoprotein Slp family Y_RS11550 PF00814 Glycoprotease family Y_RS11555 PF13307 Helicase C-terminal domain Y_RS11555 PF04851 Type III restriction enzyme, res subunit Y_RS11560 PF01042 Endoribonuclease L-PSP Y_RS11565 PF00893 Small Multidrug Resistance protein Y_RS11570 PF00893 Small Multidrug Resistance protein Y_RS11575 PF01081 KDPG and KHG aldolase Y_RS11580 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Y_RS11580 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Y_RS11585 PF01380 SIS domain Y_RS11585 PF01418 Helix-turn-helix domain, rpiR family Y_RS11590 PF02887 Pyruvate kinase, alpha/beta domain Y_RS11590 PF00224 Pyruvate kinase, barrel domain Y_RS11595 PF03279 Bacterial lipid A biosynthesis acyltransferase Y_RS11600 PF01551 Peptidase family M23 Y_RS11600 PF01476 LysM domain Y_RS11600 PF08525 Opacity-associated protein A N-terminal motif Y_RS11605 PF01297 Zinc-uptake complex component A periplasmic Y_RS11610 PF00005 ABC transporter Y_RS11615 PF00950 ABC 3 transport family Y_RS11620 PF05496 Holliday junction DNA helicase RuvB P-loop domain Y_RS11620 PF05491 RuvB C-terminal winged helix domain Y_RS11620 PF17864 RuvB AAA lid domain Y_RS11625 PF07499 RuvA, C-terminal domain Y_RS11625 PF01330 RuvA N terminal domain Y_RS11630 PF02075 Crossover junction endodeoxyribonuclease RuvC Y_RS11635 PF01709 Transcriptional regulator Y_RS11640 PF00293 NUDIX domain Y_RS11645 PF00152 tRNA synthetases class II (D, K and N) Y_RS11645 PF02938 GAD domain Y_RS11645 PF01336 OB-fold nucleic acid binding domain Y_RS11650 PF01904 Protein of unknown function DUF72 Y_RS11655 PF01124 MAPEG family Y_RS11660 PF13649 Methyltransferase domain Y_RS11665 PF08003 Protein of unknown function (DUF1698) Y_RS11670 PF03932 CutC family Y_RS11675 PF06185 YecM protein Y_RS11680 PF03485 Arginyl tRNA synthetase N terminal domain Y_RS11680 PF00750 tRNA synthetases class I (R) Y_RS11680 PF05746 DALR anticodon binding domain Y_RS11685 PF05860 haemagglutination activity domain Y_RS11685 PF13332 Hemagglutinin repeat Y_RS11690 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Y_RS11690 PF08479 POTRA domain, ShlB-type Y_RS11690 PF17287 POTRA domain Y_RS11695 PF03023 Lipid II flippase MurJ Y_RS11700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Y_RS11705 PF13302 Acetyltransferase (GNAT) domain Y_RS11710 PF07690 Major Facilitator Superfamily Y_RS11715 PF07273 Protein of unknown function (DUF1439) Y_RS11720 PF02613 Nitrate reductase delta subunit Y_RS11725 PF02811 PHP domain Y_RS11735 PF00480 ROK family Y_RS11735 PF01325 Iron dependent repressor, N-terminal DNA binding domain Y_RS11740 PF03009 Glycerophosphoryl diester phosphodiesterase family Y_RS11745 PF08402 TOBE domain Y_RS11745 PF00005 ABC transporter Y_RS11750 PF01797 Transposase IS200 like Y_RS11755 PF08402 TOBE domain Y_RS11755 PF00005 ABC transporter Y_RS11760 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS11765 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS11775 PF03009 Glycerophosphoryl diester phosphodiesterase family Y_RS11790 PF01740 STAS domain Y_RS11790 PF00916 Sulfate permease family Y_RS11795 PF00793 DAHP synthetase I family Y_RS11800 PF13369 Transglutaminase-like superfamily Y_RS11805 PF04247 Invasion gene expression up-regulator, SirB Y_RS11810 PF13847 Methyltransferase domain Y_RS11810 PF17827 PrmC N-terminal domain Y_RS11815 PF03462 PCRF domain Y_RS11815 PF00472 RF-1 domain Y_RS11820 PF01488 Shikimate / quinate 5-dehydrogenase Y_RS11820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Y_RS11820 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Y_RS11825 PF03550 Outer membrane lipoprotein LolB Y_RS11830 PF08544 GHMP kinases C terminal Y_RS11830 PF00288 GHMP kinases N terminal domain Y_RS11840 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Y_RS11840 PF14572 Phosphoribosyl synthetase-associated domain Y_RS11850 PF10762 Protein of unknown function (DUF2583) Y_RS11855 PF01195 Peptidyl-tRNA hydrolase Y_RS11860 PF01926 50S ribosome-binding GTPase Y_RS11860 PF06071 Protein of unknown function (DUF933) Y_RS11905 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Y_RS11910 PF00486 Transcriptional regulatory protein, C terminal Y_RS11910 PF00072 Response regulator receiver domain Y_RS11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS11915 PF00512 His Kinase A (phospho-acceptor) domain Y_RS11915 PF00672 HAMP domain Y_RS11955 PF08242 Methyltransferase domain Y_RS11980 PF00872 Transposase, Mutator family Y_RS12025 PF01370 NAD dependent epimerase/dehydratase family Y_RS12030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Y_RS12030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Y_RS12035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Y_RS12035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Y_RS12045 PF05962 HutD Y_RS12050 PF01979 Amidohydrolase family Y_RS12055 PF07702 UTRA domain Y_RS12055 PF00392 Bacterial regulatory proteins, gntR family Y_RS12060 PF01979 Amidohydrolase family Y_RS12070 PF01695 IstB-like ATP binding protein Y_RS12075 PF00665 Integrase core domain Y_RS12075 PF02796 Helix-turn-helix domain of resolvase Y_RS12080 PF00267 Gram-negative porin Y_RS12085 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Y_RS12090 PF04996 Succinylarginine dihydrolase Y_RS12095 PF00171 Aldehyde dehydrogenase family Y_RS12100 PF04958 Arginine N-succinyltransferase beta subunit Y_RS12105 PF00202 Aminotransferase class-III Y_RS12115 PF00155 Aminotransferase class I and II Y_RS12115 PF00392 Bacterial regulatory proteins, gntR family Y_RS12120 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Y_RS12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS12120 PF07730 Histidine kinase Y_RS12120 PF00672 HAMP domain Y_RS12125 PF01699 Sodium/calcium exchanger protein Y_RS12130 PF02562 PhoH-like protein Y_RS12145 PF13994 PgaD-like protein Y_RS12150 PF00535 Glycosyl transferase family 2 Y_RS12155 PF01522 Polysaccharide deacetylase Y_RS12155 PF14883 Hypothetical glycosyl hydrolase family 13 Y_RS12165 PF00557 Metallopeptidase family M24 Y_RS12170 PF03848 Tellurite resistance protein TehB Y_RS12170 PF09313 Domain of unknown function (DUF1971) Y_RS12180 PF00578 AhpC/TSA family Y_RS12185 PF00005 ABC transporter Y_RS12185 PF02687 FtsX-like permease family Y_RS12185 PF12704 MacB-like periplasmic core domain Y_RS12195 PF02687 FtsX-like permease family Y_RS12195 PF12704 MacB-like periplasmic core domain Y_RS12195 PF00005 ABC transporter Y_RS12205 PF10634 Fe2+ transport protein Y_RS12210 PF03239 Iron permease FTR1 family Y_RS12220 PF04960 Glutaminase Y_RS12225 PF08220 DeoR-like helix-turn-helix domain Y_RS12225 PF00455 DeoR C terminal sensor domain Y_RS12230 PF00324 Amino acid permease Y_RS12235 PF00155 Aminotransferase class I and II Y_RS12240 PF02508 Rnf-Nqr subunit, membrane protein Y_RS12250 PF04909 Amidohydrolase Y_RS12255 PF07690 Major Facilitator Superfamily Y_RS12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS12270 PF03466 LysR substrate binding domain Y_RS12275 PF03328 HpcH/HpaI aldolase/citrate lyase family Y_RS12280 PF01575 MaoC like domain Y_RS12285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Y_RS12285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Y_RS12290 PF00196 Bacterial regulatory proteins, luxR family Y_RS12290 PF00072 Response regulator receiver domain Y_RS12295 PF00989 PAS fold Y_RS12295 PF00072 Response regulator receiver domain Y_RS12295 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS12295 PF00512 His Kinase A (phospho-acceptor) domain Y_RS12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS12295 PF01627 Hpt domain Y_RS12305 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS12305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS12310 PF00577 Outer membrane usher protein Y_RS12310 PF13954 PapC N-terminal domain Y_RS12310 PF13953 PapC C-terminal domain Y_RS12320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS12320 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS12330 PF13356 Arm DNA-binding domain Y_RS12330 PF00589 Phage integrase family Y_RS12335 PF00425 chorismate binding enzyme Y_RS12340 PF07690 Major Facilitator Superfamily Y_RS12345 PF00664 ABC transporter transmembrane region Y_RS12345 PF00005 ABC transporter Y_RS12350 PF00664 ABC transporter transmembrane region Y_RS12350 PF00005 ABC transporter Y_RS12350 PF08021 Siderophore-interacting FAD-binding domain Y_RS12350 PF04954 Siderophore-interacting protein Y_RS12360 PF00501 AMP-binding enzyme Y_RS12360 PF00668 Condensation domain Y_RS12360 PF00550 Phosphopantetheine attachment site Y_RS12360 PF08242 Methyltransferase domain Y_RS12365 PF00550 Phosphopantetheine attachment site Y_RS12365 PF02801 Beta-ketoacyl synthase, C-terminal domain Y_RS12365 PF00698 Acyl transferase domain Y_RS12365 PF00668 Condensation domain Y_RS12365 PF00109 Beta-ketoacyl synthase, N-terminal domain Y_RS12365 PF16197 Ketoacyl-synthetase C-terminal extension Y_RS12375 PF00975 Thioesterase domain Y_RS12380 PF00501 AMP-binding enzyme Y_RS12380 PF13193 AMP-binding enzyme C-terminal domain Y_RS12385 PF07715 TonB-dependent Receptor Plug Domain Y_RS12385 PF00593 TonB dependent receptor Y_RS12425 PF01695 IstB-like ATP binding protein Y_RS12430 PF02796 Helix-turn-helix domain of resolvase Y_RS12430 PF00665 Integrase core domain Y_RS12460 PF08402 TOBE domain Y_RS12460 PF00005 ABC transporter Y_RS12465 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS12470 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS12480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Y_RS12480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Y_RS12485 PF00480 ROK family Y_RS12490 PF00392 Bacterial regulatory proteins, gntR family Y_RS12490 PF07702 UTRA domain Y_RS12580 PF05638 Type VI secretion system effector, Hcp Y_RS12625 PF01066 CDP-alcohol phosphatidyltransferase Y_RS12630 PF08459 UvrC Helix-hairpin-helix N-terminal Y_RS12630 PF01541 GIY-YIG catalytic domain Y_RS12630 PF02151 UvrB/uvrC motif Y_RS12635 PF00072 Response regulator receiver domain Y_RS12635 PF00196 Bacterial regulatory proteins, luxR family Y_RS12640 PF10769 Protein of unknown function (DUF2594) Y_RS12645 PF06942 GlpM protein Y_RS12655 PF13505 Outer membrane protein beta-barrel domain Y_RS12665 PF00324 Amino acid permease Y_RS12670 PF01344 Kelch motif Y_RS12675 PF03358 NADPH-dependent FMN reductase Y_RS12680 PF04261 Dyp-type peroxidase family Y_RS12685 PF09375 Imelysin Y_RS12685 PF13473 Cupredoxin-like domain Y_RS12690 PF03239 Iron permease FTR1 family Y_RS12695 PF00474 Sodium:solute symporter family Y_RS12705 PF01619 Proline dehydrogenase Y_RS12705 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Y_RS12705 PF00171 Aldehyde dehydrogenase family Y_RS12705 PF14850 DNA-binding domain of Proline dehydrogenase Y_RS12720 PF00005 ABC transporter Y_RS12725 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS12730 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS12735 PF00291 Pyridoxal-phosphate dependent enzyme Y_RS12740 PF02899 Phage integrase, N-terminal SAM-like domain Y_RS12745 PF04539 Sigma-70 region 3 Y_RS12745 PF04542 Sigma-70 region 2 Y_RS12745 PF04545 Sigma-70, region 4 Y_RS12750 PF00700 Bacterial flagellin C-terminal helical region Y_RS12750 PF08884 Flagellin D3 domain Y_RS12750 PF00669 Bacterial flagellin N-terminal helical region Y_RS12755 PF07195 Flagellar hook-associated protein 2 C-terminus Y_RS12755 PF02465 Flagellar hook-associated protein 2 N-terminus Y_RS12755 PF07196 Flagellin hook IN motif Y_RS12760 PF02561 Flagellar protein FliS Y_RS12765 PF05400 Flagellar protein FliT Y_RS12775 PF12833 Helix-turn-helix domain Y_RS12780 PF00211 Adenylate and Guanylate cyclase catalytic domain Y_RS12780 PF02743 Cache domain Y_RS12780 PF00672 HAMP domain Y_RS12785 PF01966 HD domain Y_RS12790 PF00730 HhH-GPD superfamily base excision DNA repair protein Y_RS12805 PF02049 Flagellar hook-basal body complex protein FliE Y_RS12810 PF08345 Flagellar M-ring protein C-terminal Y_RS12810 PF01514 Secretory protein of YscJ/FliF family Y_RS12815 PF01706 FliG C-terminal domain Y_RS12815 PF14841 FliG middle domain Y_RS12815 PF14842 FliG N-terminal domain Y_RS12820 PF02108 Flagellar assembly protein FliH Y_RS12825 PF18269 T3SS EscN ATPase C-terminal domain Y_RS12825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y_RS12830 PF02050 Flagellar FliJ protein Y_RS12835 PF02120 Flagellar hook-length control protein FliK Y_RS12840 PF03748 Flagellar basal body-associated protein FliL Y_RS12845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Y_RS12845 PF02154 Flagellar motor switch protein FliM Y_RS12850 PF16973 Flagellar motor switch protein FliN N-terminal Y_RS12850 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Y_RS12855 PF04347 Flagellar biosynthesis protein, FliO Y_RS12860 PF00813 FliP family Y_RS12865 PF01313 Bacterial export proteins, family 3 Y_RS12870 PF01311 Bacterial export proteins, family 1 Y_RS12885 PF00294 pfkB family carbohydrate kinase Y_RS12890 PF02653 Branched-chain amino acid transport system / permease component Y_RS12895 PF00005 ABC transporter Y_RS12900 PF13407 Periplasmic binding protein domain Y_RS12905 PF02653 Branched-chain amino acid transport system / permease component Y_RS12910 PF00596 Class II Aldolase and Adducin N-terminal domain Y_RS12915 PF04198 Putative sugar-binding domain Y_RS12920 PF00669 Bacterial flagellin N-terminal helical region Y_RS12925 PF00460 Flagella basal body rod protein Y_RS12925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y_RS12930 PF10135 Rod binding protein Y_RS12930 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Y_RS12935 PF02119 Flagellar P-ring protein Y_RS12940 PF02107 Flagellar L-ring protein Y_RS12950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y_RS12950 PF00460 Flagella basal body rod protein Y_RS12955 PF07559 Flagellar basal body protein FlaE Y_RS12955 PF00460 Flagella basal body rod protein Y_RS12955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y_RS12960 PF13861 FlgD Tudor-like domain Y_RS12960 PF03963 Flagellar hook capping protein - N-terminal region Y_RS12960 PF13860 FlgD Ig-like domain Y_RS12965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y_RS12965 PF00460 Flagella basal body rod protein Y_RS12970 PF00460 Flagella basal body rod protein Y_RS12975 PF13144 Chaperone for flagella basal body P-ring formation Y_RS12975 PF17656 FlgA N-terminal domain Y_RS12980 PF04316 Anti-sigma-28 factor, FlgM Y_RS12985 PF05130 FlgN protein Y_RS12990 PF02369 Bacterial Ig-like domain (group 1) Y_RS12990 PF09134 Invasin, domain 3 Y_RS12990 PF11924 Inverse autotransporter, beta-domain Y_RS12990 PF07979 Intimin C-type lectin domain Y_RS12995 PF01797 Transposase IS200 like Y_RS13000 PF02369 Bacterial Ig-like domain (group 1) Y_RS13000 PF11924 Inverse autotransporter, beta-domain Y_RS13000 PF07979 Intimin C-type lectin domain Y_RS13000 PF09134 Invasin, domain 3 Y_RS13005 PF06366 Flagellar protein FlhE Y_RS13010 PF00771 FHIPEP family Y_RS13015 PF01312 FlhB HrpN YscU SpaS Family Y_RS13035 PF10709 Protein of unknown function (DUF2511) Y_RS13045 PF04234 CopC domain Y_RS13050 PF00210 Ferritin-like domain Y_RS13055 PF06440 DNA polymerase III, theta subunit Y_RS13060 PF00561 alpha/beta hydrolase fold Y_RS13065 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Y_RS13065 PF00326 Prolyl oligopeptidase family Y_RS13070 PF13995 YebF-like protein Y_RS13075 PF04266 ASCH domain Y_RS13080 PF07130 YebG protein Y_RS13085 PF00270 DEAD/DEAH box helicase Y_RS13085 PF03880 DbpA RNA binding domain Y_RS13085 PF00271 Helicase conserved C-terminal domain Y_RS13090 PF02222 ATP-grasp domain Y_RS13095 PF03701 Uncharacterised protein family (UPF0181) Y_RS13100 PF04715 Anthranilate synthase component I, N terminal region Y_RS13100 PF00425 chorismate binding enzyme Y_RS13105 PF00293 NUDIX domain Y_RS13110 PF03315 Serine dehydratase beta chain Y_RS13110 PF03313 Serine dehydratase alpha chain Y_RS13115 PF01613 Flavin reductase like domain Y_RS13120 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Y_RS13120 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Y_RS13125 PF07690 Major Facilitator Superfamily Y_RS13130 PF03328 HpcH/HpaI aldolase/citrate lyase family Y_RS13135 PF01557 Fumarylacetoacetate (FAA) hydrolase family Y_RS13140 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase Y_RS13145 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Y_RS13150 PF00171 Aldehyde dehydrogenase family Y_RS13155 PF01557 Fumarylacetoacetate (FAA) hydrolase family Y_RS13160 PF01557 Fumarylacetoacetate (FAA) hydrolase family Y_RS13165 PF01047 MarR family Y_RS13170 PF03471 Transporter associated domain Y_RS13170 PF03741 Integral membrane protein TerC family Y_RS13175 PF03610 PTS system fructose IIA component Y_RS13175 PF03830 PTS system sorbose subfamily IIB component Y_RS13180 PF03609 PTS system sorbose-specific iic component Y_RS13185 PF03613 PTS system mannose/fructose/sorbose family IID component Y_RS13190 PF06173 Protein of unknown function (DUF986) Y_RS13195 PF02659 Putative manganese efflux pump Y_RS13200 PF07715 TonB-dependent Receptor Plug Domain Y_RS13200 PF00593 TonB dependent receptor Y_RS13215 PF13847 Methyltransferase domain Y_RS13220 PF02578 Multi-copper polyphenol oxidoreductase laccase Y_RS13225 PF00313 'Cold-shock' DNA-binding domain Y_RS13230 PF10736 Protein of unknown function (DUF2627) Y_RS13240 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP Y_RS13245 PF00324 Amino acid permease Y_RS13260 PF13974 YebO-like protein Y_RS13265 PF13996 YobH-like protein Y_RS13270 PF10964 Protein of unknown function (DUF2766) Y_RS13280 PF12833 Helix-turn-helix domain Y_RS13290 PF00005 ABC transporter Y_RS13290 PF00664 ABC transporter transmembrane region Y_RS13305 PF06167 Glucose-regulated metallo-peptidase M90 Y_RS13315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Y_RS13315 PF00356 Bacterial regulatory proteins, lacI family Y_RS13320 PF01695 IstB-like ATP binding protein Y_RS13325 PF02796 Helix-turn-helix domain of resolvase Y_RS13325 PF00665 Integrase core domain Y_RS13330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Y_RS13330 PF00356 Bacterial regulatory proteins, lacI family Y_RS13335 PF00872 Transposase, Mutator family Y_RS13340 PF01306 LacY proton/sugar symporter Y_RS13345 PF16875 Glycosyl hydrolase family 36 N-terminal domain Y_RS13345 PF16874 Glycosyl hydrolase family 36 C-terminal domain Y_RS13355 PF01648 4'-phosphopantetheinyl transferase superfamily Y_RS13355 PF17837 4'-phosphopantetheinyl transferase N-terminal domain Y_RS13360 PF03480 Bacterial extracellular solute-binding protein, family 7 Y_RS13370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Y_RS13375 PF00072 Response regulator receiver domain Y_RS13375 PF00196 Bacterial regulatory proteins, luxR family Y_RS13385 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) Y_RS13395 PF01522 Polysaccharide deacetylase Y_RS13405 PF01554 MatE Y_RS13410 PF00764 Arginosuccinate synthase Y_RS13415 PF01070 FMN-dependent dehydrogenase Y_RS13420 PF13378 Enolase C-terminal domain-like Y_RS13420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Y_RS13425 PF01557 Fumarylacetoacetate (FAA) hydrolase family Y_RS13435 PF04134 Protein of unknown function, DUF393 Y_RS13440 PF07690 Major Facilitator Superfamily Y_RS13445 PF09134 Invasin, domain 3 Y_RS13445 PF11924 Inverse autotransporter, beta-domain Y_RS13445 PF02369 Bacterial Ig-like domain (group 1) Y_RS13450 PF00872 Transposase, Mutator family Y_RS13455 PF04363 Protein of unknown function (DUF496) Y_RS13465 PF00929 Exonuclease Y_RS13465 PF08411 Exonuclease C-terminal Y_RS13470 PF13520 Amino acid permease Y_RS13480 PF00465 Iron-containing alcohol dehydrogenase Y_RS13485 PF00005 ABC transporter Y_RS13490 PF00005 ABC transporter Y_RS13495 PF02653 Branched-chain amino acid transport system / permease component Y_RS13505 PF01370 NAD dependent epimerase/dehydratase family Y_RS13510 PF01634 ATP phosphoribosyltransferase Y_RS13510 PF08029 HisG, C-terminal domain Y_RS13515 PF00815 Histidinol dehydrogenase Y_RS13520 PF00155 Aminotransferase class I and II Y_RS13525 PF00475 Imidazoleglycerol-phosphate dehydratase Y_RS13530 PF00117 Glutamine amidotransferase class-I Y_RS13535 PF00977 Histidine biosynthesis protein Y_RS13540 PF00977 Histidine biosynthesis protein Y_RS13545 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Y_RS13545 PF01502 Phosphoribosyl-AMP cyclohydrolase Y_RS13550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Y_RS13550 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Y_RS13555 PF00483 Nucleotidyl transferase Y_RS13560 PF00483 Nucleotidyl transferase Y_RS13570 PF00593 TonB dependent receptor Y_RS13570 PF07660 Secretin and TonB N terminus short domain Y_RS13570 PF07715 TonB-dependent Receptor Plug Domain Y_RS13575 PF01497 Periplasmic binding protein Y_RS13580 PF01032 FecCD transport family Y_RS13585 PF01032 FecCD transport family Y_RS13590 PF00005 ABC transporter Y_RS13595 PF04183 IucA / IucC family Y_RS13595 PF06276 Ferric iron reductase FhuF-like transporter Y_RS13605 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Y_RS13610 PF00282 Pyridoxal-dependent decarboxylase conserved domain Y_RS13615 PF11575 FhuF 2Fe-2S C-terminal domain Y_RS13615 PF06276 Ferric iron reductase FhuF-like transporter Y_RS13620 PF03741 Integral membrane protein TerC family Y_RS13620 PF03471 Transporter associated domain Y_RS13620 PF00571 CBS domain Y_RS13625 PF05170 AsmA family Y_RS13630 PF00692 dUTPase Y_RS13635 PF00485 Phosphoribulokinase / Uridine kinase family Y_RS13640 PF10609 NUBPL iron-transfer P-loop NTPase Y_RS13645 PF01588 Putative tRNA binding domain Y_RS13645 PF09334 tRNA synthetases class I (M) Y_RS13650 PF01797 Transposase IS200 like Y_RS13675 PF07690 Major Facilitator Superfamily Y_RS13680 PF03788 LrgA family Y_RS13685 PF04172 LrgB-like family Y_RS13690 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region Y_RS13690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Y_RS13695 PF00390 Malic enzyme, N-terminal domain Y_RS13695 PF03949 Malic enzyme, NAD binding domain Y_RS13700 PF02698 DUF218 domain Y_RS13705 PF02653 Branched-chain amino acid transport system / permease component Y_RS13710 PF00005 ABC transporter Y_RS13715 PF13407 Periplasmic binding protein domain Y_RS13720 PF04235 Protein of unknown function (DUF418) Y_RS13725 PF01227 GTP cyclohydrolase I Y_RS13730 PF06779 Uncharacterised MFS-type transporter YbfB Y_RS13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS13735 PF03466 LysR substrate binding domain Y_RS13740 PF00107 Zinc-binding dehydrogenase Y_RS13740 PF08240 Alcohol dehydrogenase GroES-like domain Y_RS13745 PF00756 Putative esterase Y_RS13765 PF13533 Biotin-lipoyl like Y_RS13770 PF00005 ABC transporter Y_RS13780 PF03454 MoeA C-terminal region (domain IV) Y_RS13780 PF03453 MoeA N-terminal region (domain I and II) Y_RS13780 PF00994 Probable molybdopterin binding domain Y_RS13785 PF00899 ThiF family Y_RS13790 PF00872 Transposase, Mutator family Y_RS13800 PF00005 ABC transporter Y_RS13800 PF12848 ABC transporter Y_RS13860 PF13592 Winged helix-turn helix Y_RS13860 PF13358 DDE superfamily endonuclease Y_RS13890 PF04717 Type VI secretion system, phage-baseplate injector Y_RS13890 PF13296 Putative type VI secretion system Rhs element Vgr Y_RS13890 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) Y_RS13895 PF10431 C-terminal, D2-small domain, of ClpB protein Y_RS13895 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS13895 PF07724 AAA domain (Cdc48 subfamily) Y_RS13895 PF17871 AAA lid domain Y_RS13905 PF00691 OmpA family Y_RS13905 PF05736 OprF membrane domain Y_RS13920 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Y_RS13935 PF00698 Acyl transferase domain Y_RS13940 PF00550 Phosphopantetheine attachment site Y_RS13955 PF00378 Enoyl-CoA hydratase/isomerase Y_RS13965 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal Y_RS13965 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal Y_RS13975 PF02801 Beta-ketoacyl synthase, C-terminal domain Y_RS13975 PF00109 Beta-ketoacyl synthase, N-terminal domain Y_RS13980 PF07977 FabA-like domain Y_RS13995 PF08031 Berberine and berberine like Y_RS13995 PF01565 FAD binding domain Y_RS14015 PF13610 DDE domain Y_RS14025 PF04358 DsrC like protein Y_RS14030 PF00708 Acylphosphatase Y_RS14035 PF17785 PUA-like domain Y_RS14035 PF10672 S-adenosylmethionine-dependent methyltransferase Y_RS14040 PF08755 Hemimethylated DNA-binding protein YccV like Y_RS14045 PF13380 CoA binding domain Y_RS14050 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Y_RS14055 PF02142 MGS-like domain Y_RS14060 PF13361 UvrD-like helicase C-terminal domain Y_RS14060 PF00580 UvrD/REP helicase N-terminal domain Y_RS14060 PF12462 DNA helicase IV / RNA helicase N terminal Y_RS14065 PF03733 Inner membrane component domain Y_RS14070 PF12805 FUSC-like inner membrane protein yccS Y_RS14075 PF04994 TfoX C-terminal domain Y_RS14075 PF04993 TfoX N-terminal domain Y_RS14080 PF03846 Cell division inhibitor SulA Y_RS14085 PF01389 OmpA-like transmembrane domain Y_RS14085 PF00691 OmpA family Y_RS14095 PF01797 Transposase IS200 like Y_RS14100 PF17414 MatP C-terminal ribbon-helix-helix domain Y_RS14100 PF06303 MatP N-terminal domain Y_RS14105 PF13654 AAA domain Y_RS14105 PF05362 Lon protease (S16) C-terminal proteolytic domain Y_RS14110 PF07977 FabA-like domain Y_RS14120 PF00109 Beta-ketoacyl synthase, N-terminal domain Y_RS14120 PF02801 Beta-ketoacyl synthase, C-terminal domain Y_RS14125 PF00665 Integrase core domain Y_RS14125 PF02796 Helix-turn-helix domain of resolvase Y_RS14130 PF01695 IstB-like ATP binding protein Y_RS14135 PF02801 Beta-ketoacyl synthase, C-terminal domain Y_RS14135 PF00109 Beta-ketoacyl synthase, N-terminal domain Y_RS14140 PF01797 Transposase IS200 like Y_RS14150 PF04957 Ribosome modulation factor Y_RS14160 PF03886 ABC-type transport auxiliary lipoprotein component Y_RS14165 PF02470 MlaD protein Y_RS14170 PF04403 Paraquat-inducible protein A Y_RS14175 PF00005 ABC transporter Y_RS14175 PF12848 ABC transporter Y_RS14175 PF16326 ABC transporter C-terminal domain Y_RS14180 PF10672 S-adenosylmethionine-dependent methyltransferase Y_RS14180 PF01170 Putative RNA methylase family UPF0020 Y_RS14180 PF02926 THUMP domain Y_RS14185 PF03476 MOSC N-terminal beta barrel domain Y_RS14185 PF03473 MOSC domain Y_RS14185 PF00111 2Fe-2S iron-sulfur cluster binding domain Y_RS14190 PF07126 Cell-division protein ZapC Y_RS14195 PF01180 Dihydroorotate dehydrogenase Y_RS14200 PF01433 Peptidase family M1 domain Y_RS14200 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Y_RS14200 PF11940 Domain of unknown function (DUF3458) Ig-like fold Y_RS14205 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Y_RS14205 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Y_RS14210 PF01336 OB-fold nucleic acid binding domain Y_RS14210 PF00152 tRNA synthetases class II (D, K and N) Y_RS14215 PF00267 Gram-negative porin Y_RS14220 PF00155 Aminotransferase class I and II Y_RS14225 PF00753 Metallo-beta-lactamase superfamily Y_RS14230 PF05951 Bacterial protein of unknown function (DUF882) Y_RS14235 PF01471 Putative peptidoglycan binding domain Y_RS14235 PF03734 L,D-transpeptidase catalytic domain Y_RS14240 PF01797 Transposase IS200 like Y_RS14250 PF16330 MukB hinge domain Y_RS14250 PF04310 MukB N-terminal Y_RS14255 PF04288 MukE-like family Y_RS14260 PF03882 MukF winged-helix domain Y_RS14260 PF17193 MukF C-terminal domain Y_RS14260 PF17192 MukF middle domain Y_RS14265 PF13847 Methyltransferase domain Y_RS14275 PF01636 Phosphotransferase enzyme family Y_RS14280 PF02348 Cytidylyltransferase Y_RS14285 PF03966 Trm112p-like protein Y_RS14290 PF00313 'Cold-shock' DNA-binding domain Y_RS14295 PF07063 Domain of unknown function (DUF1338) Y_RS14300 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Y_RS14305 PF00664 ABC transporter transmembrane region Y_RS14305 PF00005 ABC transporter Y_RS14310 PF00753 Metallo-beta-lactamase superfamily Y_RS14310 PF03772 Competence protein Y_RS14315 PF00216 Bacterial DNA-binding protein Y_RS14320 PF00575 S1 RNA binding domain Y_RS14325 PF02224 Cytidylate kinase Y_RS14330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Y_RS14335 PF00266 Aminotransferase class-V Y_RS14345 PF03895 YadA-like membrane anchor domain Y_RS14345 PF13018 Extended Signal Peptide of Type V secretion system Y_RS14345 PF05658 Head domain of trimeric autotransporter adhesin Y_RS14345 PF05662 Coiled stalk of trimeric autotransporter adhesin Y_RS14345 PF05662 Coiled stalk of trimeric autotransporter adhesin Y_RS14345 PF13018 Extended Signal Peptide of Type V secretion system Y_RS14345 PF03895 YadA-like membrane anchor domain Y_RS14345 PF05658 Head domain of trimeric autotransporter adhesin Y_RS14350 PF00710 Asparaginase, N-terminal Y_RS14350 PF17763 Glutaminase/Asparaginase C-terminal domain Y_RS14355 PF18381 YcaO cyclodehydratase C-terminal domain Y_RS14355 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding Y_RS14360 PF01226 Formate/nitrite transporter Y_RS14365 PF01228 Glycine radical Y_RS14365 PF02901 Pyruvate formate lyase-like Y_RS14375 PF04055 Radical SAM superfamily Y_RS14380 PF07690 Major Facilitator Superfamily Y_RS14385 PF02796 Helix-turn-helix domain of resolvase Y_RS14385 PF00665 Integrase core domain Y_RS14390 PF01695 IstB-like ATP binding protein Y_RS14395 PF07690 Major Facilitator Superfamily Y_RS14400 PF02403 Seryl-tRNA synthetase N-terminal domain Y_RS14400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Y_RS14405 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS14405 PF16193 AAA C-terminal domain Y_RS14405 PF12002 MgsA AAA+ ATPase C terminal Y_RS14410 PF03548 Outer membrane lipoprotein carrier protein LolA Y_RS14415 PF09397 Ftsk gamma domain Y_RS14415 PF17854 FtsK alpha domain Y_RS14415 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Y_RS14415 PF01580 FtsK/SpoIIIE family Y_RS14420 PF01037 Lrp/AsnC ligand binding domain Y_RS14425 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS14435 PF00664 ABC transporter transmembrane region Y_RS14435 PF00005 ABC transporter Y_RS14440 PF00005 ABC transporter Y_RS14440 PF00664 ABC transporter transmembrane region Y_RS14445 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Y_RS14450 PF01176 Translation initiation factor 1A / IF-1 Y_RS14455 PF01797 Transposase IS200 like Y_RS14460 PF02861 Clp amino terminal domain, pathogenicity island component Y_RS14460 PF10431 C-terminal, D2-small domain, of ClpB protein Y_RS14460 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS14460 PF17871 AAA lid domain Y_RS14460 PF07724 AAA domain (Cdc48 subfamily) Y_RS14465 PF02617 ATP-dependent Clp protease adaptor protein ClpS Y_RS14470 PF00313 'Cold-shock' DNA-binding domain Y_RS14475 PF12704 MacB-like periplasmic core domain Y_RS14475 PF00005 ABC transporter Y_RS14475 PF02687 FtsX-like permease family Y_RS14480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Y_RS14490 PF04393 Protein of unknown function (DUF535) Y_RS14495 PF11398 Protein of unknown function (DUF2813) Y_RS14500 PF03956 Lysine exporter LysO Y_RS14505 PF03063 Prismane/CO dehydrogenase family Y_RS14510 PF00175 Oxidoreductase NAD-binding domain Y_RS14510 PF00970 Oxidoreductase FAD-binding domain Y_RS14510 PF00111 2Fe-2S iron-sulfur cluster binding domain Y_RS14515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Y_RS14515 PF00205 Thiamine pyrophosphate enzyme, central domain Y_RS14515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Y_RS14520 PF01212 Beta-eliminating lyase Y_RS14525 PF11066 Protein of unknown function (DUF2867) Y_RS14525 PF13460 NAD(P)H-binding Y_RS14530 PF01370 NAD dependent epimerase/dehydratase family Y_RS14535 PF12883 Protein of unknown function (DUF3828) Y_RS14540 PF01817 Chorismate mutase type II Y_RS14545 PF00005 ABC transporter Y_RS14550 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS14555 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS14560 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS14570 PF00892 EamA-like transporter family Y_RS14575 PF10100 Staphylopine dehydrogenase Y_RS14580 PF03059 Nicotianamine synthase protein Y_RS14585 PF00005 ABC transporter Y_RS14615 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS14620 PF05958 tRNA (Uracil-5-)-methyltransferase Y_RS14625 PF10767 Protein of unknown function (DUF2593) Y_RS14630 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS14635 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS14640 PF00005 ABC transporter Y_RS14640 PF08402 TOBE domain Y_RS14645 PF13416 Bacterial extracellular solute-binding protein Y_RS14650 PF10722 Putative bacterial sensory transduction regulator Y_RS14660 PF07214 Protein of unknown function (DUF1418) Y_RS14665 PF00462 Glutaredoxin Y_RS14670 PF02080 TrkA-C domain Y_RS14670 PF06826 Predicted Permease Membrane Region Y_RS14680 PF01569 PAP2 superfamily Y_RS14685 PF01791 DeoC/LacD family aldolase Y_RS14690 PF08220 DeoR-like helix-turn-helix domain Y_RS14690 PF00455 DeoR C terminal sensor domain Y_RS14705 PF00768 D-alanyl-D-alanine carboxypeptidase Y_RS14705 PF07943 Penicillin-binding protein 5, C-terminal domain Y_RS14710 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS14715 PF09383 NIL domain Y_RS14715 PF00005 ABC transporter Y_RS14720 PF03180 NLPA lipoprotein Y_RS14735 PF00043 Glutathione S-transferase, C-terminal domain Y_RS14735 PF13417 Glutathione S-transferase, N-terminal domain Y_RS14740 PF07715 TonB-dependent Receptor Plug Domain Y_RS14740 PF00593 TonB dependent receptor Y_RS14745 PF00005 ABC transporter Y_RS14750 PF01032 FecCD transport family Y_RS14760 PF00324 Amino acid permease Y_RS14765 PF03466 LysR substrate binding domain Y_RS14765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS14770 PF03601 Conserved hypothetical protein 698 Y_RS14775 PF01261 Xylose isomerase-like TIM barrel Y_RS14780 PF13953 PapC C-terminal domain Y_RS14780 PF13954 PapC N-terminal domain Y_RS14780 PF00577 Outer membrane usher protein Y_RS14785 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS14785 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS14795 PF17550 Family of unknown function Y_RS14800 PF00486 Transcriptional regulatory protein, C terminal Y_RS14805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Y_RS14805 PF02378 Phosphotransferase system, EIIC Y_RS14810 PF00294 pfkB family carbohydrate kinase Y_RS14815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Y_RS14815 PF00381 PTS HPr component phosphorylation site Y_RS14820 PF00293 NUDIX domain Y_RS14825 PF02653 Branched-chain amino acid transport system / permease component Y_RS14830 PF00005 ABC transporter Y_RS14840 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Y_RS14845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y_RS14845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y_RS14850 PF00171 Aldehyde dehydrogenase family Y_RS14860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y_RS14860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Y_RS14860 PF01842 ACT domain Y_RS14870 PF03692 Putative zinc- or iron-chelating domain Y_RS14875 PF03222 Tryptophan/tyrosine permease family Y_RS14880 PF08207 Elongation factor P (EF-P) KOW-like domain Y_RS14880 PF01132 Elongation factor P (EF-P) OB domain Y_RS14880 PF09285 Elongation factor P, C-terminal Y_RS14885 PF03786 D-mannonate dehydratase (UxuA) Y_RS14890 PF08125 Mannitol dehydrogenase C-terminal domain Y_RS14890 PF01232 Mannitol dehydrogenase Rossmann domain Y_RS14895 PF07729 FCD domain Y_RS14895 PF00392 Bacterial regulatory proteins, gntR family Y_RS14905 PF02492 CobW/HypB/UreG, nucleotide-binding domain Y_RS14905 PF07683 Cobalamin synthesis protein cobW C-terminal domain Y_RS14910 PF01569 PAP2 superfamily Y_RS14915 PF00877 NlpC/P60 family Y_RS14920 PF00563 EAL domain Y_RS14920 PF12792 CSS motif domain associated with EAL Y_RS14925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y_RS14930 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS14935 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS14935 PF12911 N-terminal TM domain of oligopeptide transport permease C Y_RS14940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y_RS14940 PF00005 ABC transporter Y_RS14945 PF13989 YejG-like protein Y_RS14950 PF07690 Major Facilitator Superfamily Y_RS14955 PF00849 RNA pseudouridylate synthase Y_RS14955 PF01479 S4 domain Y_RS14960 PF00271 Helicase conserved C-terminal domain Y_RS14960 PF04851 Type III restriction enzyme, res subunit Y_RS14965 PF01386 Ribosomal L25p family Y_RS14970 PF01797 Transposase IS200 like Y_RS14975 PF04245 37-kD nucleoid-associated bacterial protein Y_RS14980 PF07208 Protein of unknown function (DUF1414) Y_RS14985 PF11893 Domain of unknown function (DUF3413) Y_RS14985 PF00884 Sulfatase Y_RS15005 PF05638 Type VI secretion system effector, Hcp Y_RS15025 PF00232 Glycosyl hydrolase family 1 Y_RS15030 PF01380 SIS domain Y_RS15030 PF01418 Helix-turn-helix domain, rpiR family Y_RS15035 PF07484 Phage Tail Collar Domain Y_RS15050 PF04865 Baseplate J-like protein Y_RS15090 PF04984 Phage tail sheath protein subtilisin-like domain Y_RS15090 PF17482 Phage tail sheath C-terminal domain Y_RS15110 PF01261 Xylose isomerase-like TIM barrel Y_RS15115 PF00455 DeoR C terminal sensor domain Y_RS15115 PF08220 DeoR-like helix-turn-helix domain Y_RS15125 PF07005 Sugar-binding N-terminal domain Y_RS15125 PF17042 Nucleotide-binding C-terminal domain Y_RS15130 PF06530 Phage antitermination protein Q Y_RS15135 PF01381 Helix-turn-helix Y_RS15135 PF00717 Peptidase S24-like Y_RS15140 PF06183 DinI-like family Y_RS15145 PF01278 Omptin family Y_RS15150 PF00672 HAMP domain Y_RS15150 PF02743 Cache domain Y_RS15150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y_RS15155 PF12706 Beta-lactamase superfamily domain Y_RS15170 PF00144 Beta-lactamase Y_RS15185 PF01797 Transposase IS200 like Y_RS15190 PF00267 Gram-negative porin Y_RS15200 PF07690 Major Facilitator Superfamily Y_RS15205 PF16359 RcsD-ABL domain Y_RS15205 PF01627 Hpt domain Y_RS15205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS15210 PF16359 RcsD-ABL domain Y_RS15210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS15210 PF01627 Hpt domain Y_RS15215 PF00072 Response regulator receiver domain Y_RS15215 PF00196 Bacterial regulatory proteins, luxR family Y_RS15220 PF09456 RcsC Alpha-Beta-Loop (ABL) Y_RS15220 PF00512 His Kinase A (phospho-acceptor) domain Y_RS15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS15220 PF00072 Response regulator receiver domain Y_RS15230 PF03989 DNA gyrase C-terminal domain, beta-propeller Y_RS15230 PF00521 DNA gyrase/topoisomerase IV, subunit A Y_RS15240 PF00317 Ribonucleotide reductase, all-alpha domain Y_RS15240 PF03477 ATP cone domain Y_RS15240 PF02867 Ribonucleotide reductase, barrel domain Y_RS15245 PF00268 Ribonucleotide reductase, small chain Y_RS15250 PF00111 2Fe-2S iron-sulfur cluster binding domain Y_RS15255 PF03974 Ecotin Y_RS15260 PF00994 Probable molybdopterin binding domain Y_RS15265 PF03222 Tryptophan/tyrosine permease family Y_RS15270 PF07437 YfaZ precursor Y_RS15275 PF06628 Catalase-related immune-responsive Y_RS15275 PF00199 Catalase Y_RS15280 PF13307 Helicase C-terminal domain Y_RS15280 PF06733 DEAD_2 Y_RS15285 PF00267 Gram-negative porin Y_RS15290 PF00892 EamA-like transporter family Y_RS15300 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Y_RS15300 PF01276 Orn/Lys/Arg decarboxylase, major domain Y_RS15300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Y_RS15305 PF13520 Amino acid permease Y_RS15310 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS15315 PF00005 ABC transporter Y_RS15320 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS15325 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Y_RS15330 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Y_RS15335 PF00581 Rhodanese-like domain Y_RS15350 PF00005 ABC transporter Y_RS15355 PF00005 ABC transporter Y_RS15360 PF02653 Branched-chain amino acid transport system / permease component Y_RS15365 PF02653 Branched-chain amino acid transport system / permease component Y_RS15370 PF02954 Bacterial regulatory protein, Fis family Y_RS15370 PF13188 PAS domain Y_RS15370 PF00158 Sigma-54 interaction domain Y_RS15375 PF07308 Protein of unknown function (DUF1456) Y_RS15380 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS15385 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS15395 PF00005 ABC transporter Y_RS15400 PF04226 Transglycosylase associated protein Y_RS15410 PF01844 HNH endonuclease Y_RS15415 PF01928 CYTH domain Y_RS15420 PF09330 D-lactate dehydrogenase, membrane binding Y_RS15420 PF01565 FAD binding domain Y_RS15425 PF00768 D-alanyl-D-alanine carboxypeptidase Y_RS15435 PF01207 Dihydrouridine synthase (Dus) Y_RS15445 PF01797 Transposase IS200 like Y_RS15455 PF01027 Inhibitor of apoptosis-promoting Bax1 Y_RS15460 PF02391 MoaE protein Y_RS15465 PF02597 ThiS family Y_RS15470 PF01967 MoaC family Y_RS15475 PF06463 Molybdenum Cofactor Synthesis C Y_RS15475 PF04055 Radical SAM superfamily Y_RS15485 PF01933 Uncharacterised protein family UPF0052 Y_RS15490 PF09905 DNA-binding protein VF530 Y_RS15495 PF00271 Helicase conserved C-terminal domain Y_RS15495 PF04851 Type III restriction enzyme, res subunit Y_RS15495 PF02151 UvrB/uvrC motif Y_RS15495 PF12344 Ultra-violet resistance protein B Y_RS15495 PF17757 UvrB interaction domain Y_RS15500 PF09383 NIL domain Y_RS15500 PF00005 ABC transporter Y_RS15510 PF08241 Methyltransferase domain Y_RS15515 PF00155 Aminotransferase class I and II Y_RS15520 PF04055 Radical SAM superfamily Y_RS15520 PF06968 Biotin and Thiamin Synthesis associated domain Y_RS15525 PF00202 Aminotransferase class-III Y_RS15530 PF10282 Lactonase, 7-bladed beta-propeller Y_RS15540 PF03459 TOBE domain Y_RS15540 PF00005 ABC transporter Y_RS15545 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS15555 PF10766 Multidrug efflux pump-associated protein AcrZ Y_RS15560 PF03459 TOBE domain Y_RS15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS15565 PF00005 ABC transporter Y_RS15580 PF16363 GDP-mannose 4,6 dehydratase Y_RS15585 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Y_RS15585 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Y_RS15590 PF00288 GHMP kinases N terminal domain Y_RS15590 PF08544 GHMP kinases C terminal Y_RS15590 PF10509 Galactokinase galactose-binding signature Y_RS15600 PF01263 Aldose 1-epimerase Y_RS15610 PF00300 Histidine phosphatase superfamily (branch 1) Y_RS15615 PF00793 DAHP synthetase I family Y_RS15620 PF01545 Cation efflux family Y_RS15625 PF04973 Nicotinamide mononucleotide transporter Y_RS15630 PF02445 Quinolinate synthetase A protein Y_RS15650 PF16331 TolA binding protein trimerisation Y_RS15650 PF13174 Tetratricopeptide repeat Y_RS15655 PF00691 OmpA family Y_RS15660 PF07676 WD40-like Beta Propeller Repeat Y_RS15660 PF04052 TolB amino-terminal domain Y_RS15665 PF06519 TolA C-terminal Y_RS15665 PF06519 TolA C-terminal Y_RS15670 PF02472 Biopolymer transport protein ExbD/TolR Y_RS15675 PF01618 MotA/TolQ/ExbB proton channel family Y_RS15680 PF03061 Thioesterase superfamily Y_RS15685 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) Y_RS15690 PF08173 Membrane bound YbgT-like protein Y_RS15695 PF02322 Cytochrome bd terminal oxidase subunit II Y_RS15700 PF01654 Cytochrome bd terminal oxidase subunit I Y_RS15705 PF00549 CoA-ligase Y_RS15705 PF02629 CoA binding domain Y_RS15710 PF00549 CoA-ligase Y_RS15710 PF08442 ATP-grasp domain Y_RS15715 PF02817 e3 binding domain Y_RS15715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Y_RS15715 PF00364 Biotin-requiring enzyme Y_RS15720 PF16870 2-oxoglutarate dehydrogenase C-terminal Y_RS15720 PF00676 Dehydrogenase E1 component Y_RS15720 PF16078 2-oxoglutarate dehydrogenase N-terminus Y_RS15720 PF02779 Transketolase, pyrimidine binding domain Y_RS15725 PF13085 2Fe-2S iron-sulfur cluster binding domain Y_RS15730 PF02910 Fumarate reductase flavoprotein C-term Y_RS15730 PF00890 FAD binding domain Y_RS15735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Y_RS15740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Y_RS15745 PF00285 Citrate synthase, C-terminal domain Y_RS15750 PF01025 GrpE Y_RS15755 PF01513 ATP-NAD kinase Y_RS15760 PF02463 RecF/RecN/SMC N terminal domain Y_RS15765 PF04355 SmpA / OmlA family Y_RS15770 PF03658 RnfH family Ubiquitin Y_RS15775 PF03364 Polyketide cyclase / dehydrase and lipid transport Y_RS15780 PF01668 SmpB protein Y_RS15790 PF01797 Transposase IS200 like Y_RS15795 PF13356 Arm DNA-binding domain Y_RS15795 PF00589 Phage integrase family Y_RS15855 PF05973 Phage derived protein Gp49-like (DUF891) Y_RS15865 PF02796 Helix-turn-helix domain of resolvase Y_RS15865 PF00665 Integrase core domain Y_RS15870 PF01695 IstB-like ATP binding protein Y_RS15885 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Y_RS15895 PF00929 Exonuclease Y_RS15900 PF00075 RNase H Y_RS15905 PF08241 Methyltransferase domain Y_RS15910 PF16123 Hydroxyacylglutathione hydrolase C-terminus Y_RS15910 PF00753 Metallo-beta-lactamase superfamily Y_RS15915 PF01464 Transglycosylase SLT domain Y_RS15915 PF01476 LysM domain Y_RS15920 PF03372 Endonuclease/Exonuclease/phosphatase family Y_RS15930 PF00248 Aldo/keto reductase family Y_RS15970 PF00005 ABC transporter Y_RS15970 PF09383 NIL domain Y_RS15975 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS15980 PF03180 NLPA lipoprotein Y_RS15985 PF16358 RcsF lipoprotein Y_RS15990 PF01980 tRNA-methyltransferase O Y_RS15990 PF18389 TrmO C-terminal domain Y_RS15995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Y_RS15995 PF04073 Aminoacyl-tRNA editing domain Y_RS15995 PF03129 Anticodon binding domain Y_RS16000 PF04170 NlpE N-terminal domain Y_RS16000 PF17185 NlpE C-terminal OB domain Y_RS16005 PF00472 RF-1 domain Y_RS16010 PF07152 YaeQ protein Y_RS16015 PF06786 Uncharacterised protein family (UPF0253) Y_RS16020 PF07073 Modulator of Rho-dependent transcription termination (ROF) Y_RS16025 PF00034 Cytochrome c Y_RS16030 PF11734 TilS substrate C-terminal domain Y_RS16030 PF09179 TilS substrate binding domain Y_RS16030 PF01171 PP-loop family Y_RS16035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Y_RS16040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Y_RS16045 PF01336 OB-fold nucleic acid binding domain Y_RS16045 PF02811 PHP domain Y_RS16045 PF14579 Helix-hairpin-helix motif Y_RS16045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Y_RS16045 PF07733 Bacterial DNA polymerase III alpha NTPase domain Y_RS16050 PF01351 Ribonuclease HII Y_RS16055 PF02684 Lipid-A-disaccharide synthetase Y_RS16060 PF00132 Bacterial transferase hexapeptide (six repeats) Y_RS16060 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Y_RS16065 PF07977 FabA-like domain Y_RS16070 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Y_RS16070 PF00132 Bacterial transferase hexapeptide (six repeats) Y_RS16075 PF03938 Outer membrane protein (OmpH-like) Y_RS16080 PF07244 Surface antigen variable number repeat Y_RS16080 PF01103 Surface antigen Y_RS16085 PF02163 Peptidase family M50 Y_RS16085 PF17820 PDZ domain Y_RS16095 PF01255 Putative undecaprenyl diphosphate synthase Y_RS16100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Y_RS16100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Y_RS16100 PF13288 DXP reductoisomerase C-terminal domain Y_RS16105 PF01765 Ribosome recycling factor Y_RS16110 PF00696 Amino acid kinase family Y_RS16115 PF00889 Elongation factor TS Y_RS16120 PF00318 Ribosomal protein S2 Y_RS16125 PF00557 Metallopeptidase family M24 Y_RS16130 PF01842 ACT domain Y_RS16130 PF01909 Nucleotidyltransferase domain Y_RS16130 PF01966 HD domain Y_RS16130 PF08335 GlnD PII-uridylyltransferase Y_RS16135 PF00132 Bacterial transferase hexapeptide (six repeats) Y_RS16135 PF14602 Hexapeptide repeat of succinyl-transferase Y_RS16135 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Y_RS16140 PF11944 Protein of unknown function (DUF3461) Y_RS16145 PF00258 Flavodoxin Y_RS16150 PF00849 RNA pseudouridylate synthase Y_RS16155 PF04287 tRNA pseudouridine synthase C Y_RS16160 PF01797 Transposase IS200 like Y_RS16165 PF07348 Syd protein (SUKH-2) Y_RS16170 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Y_RS16170 PF14489 QueF-like protein Y_RS16175 PF03641 Possible lysine decarboxylase Y_RS16175 PF11892 Domain of unknown function (DUF3412) Y_RS16175 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Y_RS16180 PF00665 Integrase core domain Y_RS16180 PF02796 Helix-turn-helix domain of resolvase Y_RS16185 PF01695 IstB-like ATP binding protein Y_RS16190 PF01367 5'-3' exonuclease, C-terminal SAM fold Y_RS16190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Y_RS16195 PF18125 RlmM ferredoxin-like domain Y_RS16195 PF01728 FtsJ-like methyltransferase Y_RS16200 PF04241 Protein of unknown function (DUF423) Y_RS16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS16205 PF03466 LysR substrate binding domain Y_RS16210 PF00266 Aminotransferase class-V Y_RS16215 PF02657 Fe-S metabolism associated domain Y_RS16220 PF00899 ThiF family Y_RS16225 PF03562 MltA specific insert domain Y_RS16225 PF06725 3D domain Y_RS16240 PF11741 AMIN domain Y_RS16240 PF01520 N-acetylmuramoyl-L-alanine amidase Y_RS16245 PF00696 Amino acid kinase family Y_RS16245 PF00583 Acetyltransferase (GNAT) family Y_RS16250 PF13538 UvrD-like helicase C-terminal domain Y_RS16255 PF12705 PD-(D/E)XK nuclease superfamily Y_RS16255 PF00580 UvrD/REP helicase N-terminal domain Y_RS16255 PF13361 UvrD-like helicase C-terminal domain Y_RS16260 PF00675 Insulinase (Peptidase family M16) Y_RS16260 PF05193 Peptidase M16 inactive domain Y_RS16260 PF16187 Middle or third domain of peptidase_M16 Y_RS16265 PF17946 RecC C-terminal domain Y_RS16295 PF00303 Thymidylate synthase Y_RS16300 PF01790 Prolipoprotein diacylglyceryl transferase Y_RS16305 PF02896 PEP-utilising enzyme, TIM barrel domain Y_RS16305 PF05524 PEP-utilising enzyme, N-terminal Y_RS16305 PF01590 GAF domain Y_RS16305 PF00391 PEP-utilising enzyme, mobile domain Y_RS16310 PF00293 NUDIX domain Y_RS16325 PF02976 DNA mismatch repair enzyme MutH Y_RS16330 PF00248 Aldo/keto reductase family Y_RS16345 PF07690 Major Facilitator Superfamily Y_RS16350 PF00501 AMP-binding enzyme Y_RS16350 PF01553 Acyltransferase Y_RS16350 PF13193 AMP-binding enzyme C-terminal domain Y_RS16355 PF00384 Molybdopterin oxidoreductase Y_RS16355 PF01568 Molydopterin dinucleotide binding domain Y_RS16360 PF00356 Bacterial regulatory proteins, lacI family Y_RS16365 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Y_RS16365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Y_RS16370 PF03466 LysR substrate binding domain Y_RS16370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS16375 PF07690 Major Facilitator Superfamily Y_RS16380 PF03466 LysR substrate binding domain Y_RS16380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS16395 PF00672 HAMP domain Y_RS16395 PF02203 Tar ligand binding domain homologue Y_RS16395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y_RS16415 PF06750 Bacterial Peptidase A24 N-terminal domain Y_RS16415 PF01478 Type IV leader peptidase family Y_RS16435 PF07963 Prokaryotic N-terminal methylation motif Y_RS16435 PF11612 Type II secretion system (T2SS), protein J Y_RS16450 PF07963 Prokaryotic N-terminal methylation motif Y_RS16450 PF08334 Type II secretion system (T2SS), protein G Y_RS16455 PF00482 Type II secretion system (T2SS), protein F Y_RS16465 PF00437 Type II/IV secretion system protein Y_RS16470 PF03958 Bacterial type II/III secretion system short domain Y_RS16470 PF00263 Bacterial type II and III secretion system protein Y_RS16485 PF00484 Carbonic anhydrase Y_RS16510 PF02278 Polysaccharide lyase family 8, super-sandwich domain Y_RS16510 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain Y_RS16510 PF09093 Lyase, catalytic Y_RS16510 PF09092 Lyase, N terminal Y_RS16515 PF01695 IstB-like ATP binding protein Y_RS16520 PF02796 Helix-turn-helix domain of resolvase Y_RS16520 PF00665 Integrase core domain Y_RS16525 PF01797 Transposase IS200 like Y_RS16530 PF00884 Sulfatase Y_RS16535 PF00455 DeoR C terminal sensor domain Y_RS16535 PF08220 DeoR-like helix-turn-helix domain Y_RS16540 PF08013 Tagatose 6 phosphate kinase Y_RS16545 PF01380 SIS domain Y_RS16550 PF03830 PTS system sorbose subfamily IIB component Y_RS16555 PF03609 PTS system sorbose-specific iic component Y_RS16565 PF03610 PTS system fructose IIA component Y_RS16570 PF01979 Amidohydrolase family Y_RS16580 PF07470 Glycosyl Hydrolase Family 88 Y_RS16585 PF13186 Iron-sulfur cluster-binding domain Y_RS16585 PF04055 Radical SAM superfamily Y_RS16590 PF00884 Sulfatase Y_RS16600 PF01116 Fructose-bisphosphate aldolase class-II Y_RS16615 PF00356 Bacterial regulatory proteins, lacI family Y_RS16620 PF07690 Major Facilitator Superfamily Y_RS16625 PF01055 Glycosyl hydrolases family 31 Y_RS16625 PF17137 Domain of unknown function (DUF5110) Y_RS16625 PF16338 Domain of unknown function (DUF4968) Y_RS16625 PF13802 Galactose mutarotase-like Y_RS16630 PF00356 Bacterial regulatory proteins, lacI family Y_RS16635 PF02264 LamB porin Y_RS16640 PF02378 Phosphotransferase system, EIIC Y_RS16640 PF00367 phosphotransferase system, EIIB Y_RS16645 PF08532 Beta-galactosidase trimerisation domain Y_RS16645 PF08533 Beta-galactosidase C-terminal domain Y_RS16645 PF02449 Beta-galactosidase Y_RS16650 PF07745 Glycosyl hydrolase family 53 Y_RS16655 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS16660 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS16665 PF13416 Bacterial extracellular solute-binding protein Y_RS16670 PF00005 ABC transporter Y_RS16670 PF17912 MalK OB fold domain Y_RS16675 PF00005 ABC transporter Y_RS16680 PF02653 Branched-chain amino acid transport system / permease component Y_RS16685 PF13407 Periplasmic binding protein domain Y_RS16695 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Y_RS16700 PF03551 Transcriptional regulator PadR-like family Y_RS16795 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA Y_RS16800 PF15723 Motility quorum-sensing regulator, toxin of MqsA Y_RS16825 PF13356 Arm DNA-binding domain Y_RS16825 PF14659 Phage integrase, N-terminal SAM-like domain Y_RS16825 PF00589 Phage integrase family Y_RS16835 PF00152 tRNA synthetases class II (D, K and N) Y_RS16835 PF01336 OB-fold nucleic acid binding domain Y_RS16840 PF03462 PCRF domain Y_RS16840 PF00472 RF-1 domain Y_RS16845 PF01368 DHH family Y_RS16845 PF02272 DHHA1 domain Y_RS16845 PF17768 RecJ OB domain Y_RS16850 PF13098 Thioredoxin-like domain Y_RS16850 PF10411 Disulfide bond isomerase protein N-terminus Y_RS16855 PF00589 Phage integrase family Y_RS16855 PF02899 Phage integrase, N-terminal SAM-like domain Y_RS16860 PF00258 Flavodoxin Y_RS16865 PF06123 Inner membrane protein CreD Y_RS16870 PF00512 His Kinase A (phospho-acceptor) domain Y_RS16870 PF00672 HAMP domain Y_RS16870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS16875 PF00072 Response regulator receiver domain Y_RS16875 PF00486 Transcriptional regulatory protein, C terminal Y_RS16880 PF07254 Membrane-bound toxin component of toxin-antitoxin system Y_RS16885 PF03937 Flavinator of succinate dehydrogenase Y_RS16890 PF01571 Aminomethyltransferase folate-binding domain Y_RS16900 PF03006 Haemolysin-III related Y_RS16910 PF05658 Head domain of trimeric autotransporter adhesin Y_RS16910 PF03895 YadA-like membrane anchor domain Y_RS16910 PF05662 Coiled stalk of trimeric autotransporter adhesin Y_RS16910 PF13018 Extended Signal Peptide of Type V secretion system Y_RS16925 PF02347 Glycine cleavage system P-protein Y_RS16930 PF01597 Glycine cleavage H-protein Y_RS16935 PF08669 Glycine cleavage T-protein C-terminal barrel domain Y_RS16935 PF01571 Aminomethyltransferase folate-binding domain Y_RS16940 PF01494 FAD binding domain Y_RS16945 PF01494 FAD binding domain Y_RS16950 PF05195 Aminopeptidase P, N-terminal domain Y_RS16950 PF00557 Metallopeptidase family M24 Y_RS16955 PF03695 Uncharacterised protein family (UPF0149) Y_RS16960 PF05164 Cell division protein ZapA Y_RS16965 PF01812 5-formyltetrahydrofolate cyclo-ligase family Y_RS16970 PF01842 ACT domain Y_RS16970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Y_RS16970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y_RS16975 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Y_RS16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS16980 PF03466 LysR substrate binding domain Y_RS16985 PF04402 Protein of unknown function (DUF541) Y_RS16990 PF01810 LysE type translocator Y_RS16995 PF00924 Mechanosensitive ion channel Y_RS16995 PF05552 Conserved TM helix Y_RS17005 PF01116 Fructose-bisphosphate aldolase class-II Y_RS17010 PF00162 Phosphoglycerate kinase Y_RS17015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Y_RS17015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Y_RS17025 PF02779 Transketolase, pyrimidine binding domain Y_RS17025 PF02780 Transketolase, C-terminal domain Y_RS17025 PF00456 Transketolase, thiamine diphosphate binding domain Y_RS17030 PF01435 Peptidase family M48 Y_RS17040 PF17810 Arginine decarboxylase helical bundle domain Y_RS17040 PF17944 Arginine decarboxylase C-terminal helical extension Y_RS17040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Y_RS17045 PF02773 S-adenosylmethionine synthetase, C-terminal domain Y_RS17045 PF02772 S-adenosylmethionine synthetase, central domain Y_RS17045 PF00438 S-adenosylmethionine synthetase, N-terminal domain Y_RS17050 PF10263 SprT-like family Y_RS17050 PF17283 SprT-like zinc ribbon domain Y_RS17055 PF04231 Endonuclease I Y_RS17060 PF04452 RNA methyltransferase Y_RS17065 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Y_RS17065 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Y_RS17070 PF02622 Uncharacterized ACR, COG1678 Y_RS17075 PF03652 Holliday junction resolvase Y_RS17080 PF00795 Carbon-nitrogen hydrolase Y_RS17085 PF04371 Porphyromonas-type peptidyl-arginine deiminase Y_RS17090 PF00437 Type II/IV secretion system protein Y_RS17095 PF01168 Alanine racemase, N-terminal domain Y_RS17100 PF14748 Pyrroline-5-carboxylate reductase dimerisation Y_RS17100 PF03807 NADP oxidoreductase coenzyme F420-dependent Y_RS17105 PF02325 YGGT family Y_RS17110 PF02594 Uncharacterised ACR, YggU family COG1872 Y_RS17115 PF01725 Ham1 family Y_RS17120 PF06969 HemN C-terminal domain Y_RS17120 PF04055 Radical SAM superfamily Y_RS17125 PF11713 Peptidase C80 family Y_RS17125 PF16671 Actin cross-linking domain Y_RS17125 PF07634 RtxA repeat Y_RS17125 PF11647 Membrane Localization Domain Y_RS17125 PF12146 Serine aminopeptidase, S33 Y_RS17130 PF11101 Protein of unknown function (DUF2884) Y_RS17135 PF11101 Protein of unknown function (DUF2884) Y_RS17140 PF04960 Glutaminase Y_RS17145 PF04320 Protein with unknown function (DUF469) Y_RS17150 PF02390 Putative methyltransferase Y_RS17155 PF14815 NUDIX domain Y_RS17155 PF00730 HhH-GPD superfamily base excision DNA repair protein Y_RS17155 PF00633 Helix-hairpin-helix motif Y_RS17155 PF10576 Iron-sulfur binding domain of endonuclease III Y_RS17160 PF04362 Bacterial Fe(2+) trafficking Y_RS17165 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Y_RS17165 PF01464 Transglycosylase SLT domain Y_RS17175 PF07715 TonB-dependent Receptor Plug Domain Y_RS17180 PF02653 Branched-chain amino acid transport system / permease component Y_RS17185 PF00005 ABC transporter Y_RS17190 PF13407 Periplasmic binding protein domain Y_RS17195 PF01276 Orn/Lys/Arg decarboxylase, major domain Y_RS17195 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Y_RS17195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Y_RS17205 PF02899 Phage integrase, N-terminal SAM-like domain Y_RS17205 PF00589 Phage integrase family Y_RS17215 PF03400 IS1 transposase Y_RS17220 PF12759 InsA C-terminal domain Y_RS17220 PF03811 InsA N-terminal domain Y_RS17245 PF03811 InsA N-terminal domain Y_RS17245 PF12759 InsA C-terminal domain Y_RS17265 PF04717 Type VI secretion system, phage-baseplate injector Y_RS17265 PF13296 Putative type VI secretion system Rhs element Vgr Y_RS17265 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) Y_RS17270 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS17270 PF10431 C-terminal, D2-small domain, of ClpB protein Y_RS17270 PF17871 AAA lid domain Y_RS17270 PF07724 AAA domain (Cdc48 subfamily) Y_RS17280 PF00691 OmpA family Y_RS17280 PF05736 OprF membrane domain Y_RS17295 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Y_RS17315 PF03811 InsA N-terminal domain Y_RS17315 PF12759 InsA C-terminal domain Y_RS17325 PF02517 CPBP intramembrane metalloprotease Y_RS17330 PF00765 Autoinducer synthase Y_RS17335 PF03472 Autoinducer binding domain Y_RS17335 PF00196 Bacterial regulatory proteins, luxR family Y_RS17355 PF06276 Ferric iron reductase FhuF-like transporter Y_RS17355 PF04183 IucA / IucC family Y_RS17360 PF06276 Ferric iron reductase FhuF-like transporter Y_RS17360 PF04183 IucA / IucC family Y_RS17370 PF06276 Ferric iron reductase FhuF-like transporter Y_RS17370 PF04183 IucA / IucC family Y_RS17375 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Y_RS17380 PF07715 TonB-dependent Receptor Plug Domain Y_RS17380 PF00593 TonB dependent receptor Y_RS17395 PF13276 HTH-like domain Y_RS17395 PF13333 Integrase core domain Y_RS17395 PF00665 Integrase core domain Y_RS17400 PF00990 Diguanylate cyclase, GGDEF domain Y_RS17400 PF08448 PAS fold Y_RS17400 PF08447 PAS fold Y_RS17400 PF00563 EAL domain Y_RS17410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Y_RS17410 PF00529 HlyD membrane-fusion protein of T1SS Y_RS17415 PF00873 AcrB/AcrD/AcrF family Y_RS17420 PF07906 ShET2 enterotoxin, N-terminal region Y_RS17430 PF03797 Autotransporter beta-domain Y_RS17435 PF14496 C-terminal novel E3 ligase, LRR-interacting Y_RS17435 PF12468 Type III secretion system leucine rich repeat protein Y_RS17440 PF14496 C-terminal novel E3 ligase, LRR-interacting Y_RS17440 PF12468 Type III secretion system leucine rich repeat protein Y_RS17440 PF14496 C-terminal novel E3 ligase, LRR-interacting Y_RS17440 PF12468 Type III secretion system leucine rich repeat protein Y_RS17445 PF14496 C-terminal novel E3 ligase, LRR-interacting Y_RS17445 PF12468 Type III secretion system leucine rich repeat protein Y_RS17450 PF03806 AbgT putative transporter family Y_RS17455 PF07687 Peptidase dimerisation domain Y_RS17455 PF01546 Peptidase family M20/M25/M40 Y_RS17460 PF07715 TonB-dependent Receptor Plug Domain Y_RS17460 PF00593 TonB dependent receptor Y_RS17465 PF02801 Beta-ketoacyl synthase, C-terminal domain Y_RS17465 PF00501 AMP-binding enzyme Y_RS17465 PF16197 Ketoacyl-synthetase C-terminal extension Y_RS17465 PF00668 Condensation domain Y_RS17465 PF13193 AMP-binding enzyme C-terminal domain Y_RS17465 PF00109 Beta-ketoacyl synthase, N-terminal domain Y_RS17465 PF00550 Phosphopantetheine attachment site Y_RS17465 PF00202 Aminotransferase class-III Y_RS17470 PF02796 Helix-turn-helix domain of resolvase Y_RS17470 PF00665 Integrase core domain Y_RS17475 PF01695 IstB-like ATP binding protein Y_RS17485 PF13193 AMP-binding enzyme C-terminal domain Y_RS17485 PF00501 AMP-binding enzyme Y_RS17485 PF00668 Condensation domain Y_RS17490 PF00668 Condensation domain Y_RS17490 PF00501 AMP-binding enzyme Y_RS17490 PF00550 Phosphopantetheine attachment site Y_RS17490 PF08242 Methyltransferase domain Y_RS17505 PF00975 Thioesterase domain Y_RS17515 PF08021 Siderophore-interacting FAD-binding domain Y_RS17515 PF04954 Siderophore-interacting protein Y_RS17515 PF00664 ABC transporter transmembrane region Y_RS17515 PF00005 ABC transporter Y_RS17520 PF00005 ABC transporter Y_RS17520 PF00664 ABC transporter transmembrane region Y_RS17535 PF02447 GntP family permease Y_RS17545 PF12951 Passenger-associated-transport-repeat Y_RS17550 PF12951 Passenger-associated-transport-repeat Y_RS17555 PF04717 Type VI secretion system, phage-baseplate injector Y_RS17565 PF03527 RHS protein Y_RS17565 PF05593 RHS Repeat Y_RS17580 PF00939 Sodium:sulfate symporter transmembrane region Y_RS17585 PF00356 Bacterial regulatory proteins, lacI family Y_RS17595 PF00665 Integrase core domain Y_RS17595 PF13333 Integrase core domain Y_RS17595 PF13276 HTH-like domain Y_RS17605 PF00700 Bacterial flagellin C-terminal helical region Y_RS17605 PF00669 Bacterial flagellin N-terminal helical region Y_RS17610 PF00486 Transcriptional regulatory protein, C terminal Y_RS17610 PF18500 CadC C-terminal domain 1 Y_RS17630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y_RS17630 PF00460 Flagella basal body rod protein Y_RS17640 PF02119 Flagellar P-ring protein Y_RS17645 PF02107 Flagellar L-ring protein Y_RS17650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y_RS17650 PF00460 Flagella basal body rod protein Y_RS17655 PF00460 Flagella basal body rod protein Y_RS17655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y_RS17660 PF07559 Flagellar basal body protein FlaE Y_RS17660 PF00460 Flagella basal body rod protein Y_RS17660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y_RS17665 PF03963 Flagellar hook capping protein - N-terminal region Y_RS17665 PF13860 FlgD Ig-like domain Y_RS17665 PF13861 FlgD Tudor-like domain Y_RS17670 PF00460 Flagella basal body rod protein Y_RS17670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y_RS17675 PF00460 Flagella basal body rod protein Y_RS17680 PF13144 Chaperone for flagella basal body P-ring formation Y_RS17700 PF18269 T3SS EscN ATPase C-terminal domain Y_RS17700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y_RS17715 PF08345 Flagellar M-ring protein C-terminal Y_RS17715 PF01514 Secretory protein of YscJ/FliF family Y_RS17720 PF02049 Flagellar hook-basal body complex protein FliE Y_RS17725 PF00072 Response regulator receiver domain Y_RS17725 PF00158 Sigma-54 interaction domain Y_RS17725 PF02954 Bacterial regulatory protein, Fis family Y_RS17735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Y_RS17740 PF00813 FliP family Y_RS17745 PF01313 Bacterial export proteins, family 3 Y_RS17750 PF01311 Bacterial export proteins, family 1 Y_RS17755 PF01312 FlhB HrpN YscU SpaS Family Y_RS17775 PF01497 Periplasmic binding protein Y_RS17780 PF00419 Fimbrial protein Y_RS17780 PF09222 Fimbrial adhesin F17-AG, lectin domain Y_RS17785 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS17785 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS17790 PF13953 PapC C-terminal domain Y_RS17790 PF13954 PapC N-terminal domain Y_RS17790 PF00577 Outer membrane usher protein Y_RS17795 PF01797 Transposase IS200 like Y_RS17810 PF00263 Bacterial type II and III secretion system protein Y_RS17810 PF04972 BON domain Y_RS17810 PF13629 Pilus formation protein N terminal region Y_RS17815 PF04972 BON domain Y_RS17815 PF00263 Bacterial type II and III secretion system protein Y_RS17815 PF13629 Pilus formation protein N terminal region Y_RS17830 PF00437 Type II/IV secretion system protein Y_RS17865 PF02472 Biopolymer transport protein ExbD/TolR Y_RS17870 PF01618 MotA/TolQ/ExbB proton channel family Y_RS17875 PF01053 Cys/Met metabolism PLP-dependent enzyme Y_RS17880 PF09335 SNARE associated Golgi protein Y_RS17885 PF12833 Helix-turn-helix domain Y_RS17885 PF06719 AraC-type transcriptional regulator N-terminus Y_RS17890 PF00465 Iron-containing alcohol dehydrogenase Y_RS17900 PF00248 Aldo/keto reductase family Y_RS17910 PF07731 Multicopper oxidase Y_RS17910 PF07732 Multicopper oxidase Y_RS17915 PF01553 Acyltransferase Y_RS17920 PF00521 DNA gyrase/topoisomerase IV, subunit A Y_RS17920 PF03989 DNA gyrase C-terminal domain, beta-propeller Y_RS17930 PF02525 Flavodoxin-like fold Y_RS17935 PF03466 LysR substrate binding domain Y_RS17935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS17940 PF01751 Toprim domain Y_RS17940 PF00986 DNA gyrase B subunit, carboxyl terminus Y_RS17940 PF00204 DNA gyrase B Y_RS17940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS17945 PF05728 Uncharacterised protein family (UPF0227) Y_RS17950 PF00149 Calcineurin-like phosphoesterase Y_RS17955 PF06853 Protein of unknown function (DUF1249) Y_RS17960 PF00293 NUDIX domain Y_RS17965 PF02321 Outer membrane efflux protein Y_RS17975 PF06693 Protein of unknown function (DUF1190) Y_RS17980 PF03738 Glutathionylspermidine synthase preATP-grasp Y_RS17985 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Y_RS17990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Y_RS18000 PF04380 Membrane fusogenic activity Y_RS18005 PF13520 Amino acid permease Y_RS18010 PF01467 Cytidylyltransferase-like Y_RS18010 PF00294 pfkB family carbohydrate kinase Y_RS18015 PF03710 Glutamate-ammonia ligase adenylyltransferase Y_RS18015 PF08335 GlnD PII-uridylyltransferase Y_RS18020 PF01928 CYTH domain Y_RS18025 PF08239 Bacterial SH3 domain Y_RS18030 PF12627 Probable RNA and SrmB- binding site of polymerase A Y_RS18030 PF01743 Poly A polymerase head domain Y_RS18030 PF01966 HD domain Y_RS18035 PF02673 Bacitracin resistance protein BacA Y_RS18040 PF02152 Dihydroneopterin aldolase Y_RS18045 PF02660 Glycerol-3-phosphate acyltransferase Y_RS18050 PF00814 Glycoprotease family Y_RS18055 PF01165 Ribosomal protein S21 Y_RS18060 PF01807 CHC2 zinc finger Y_RS18060 PF10410 DnaB-helicase binding domain of primase Y_RS18060 PF08275 DNA primase catalytic core, N-terminal domain Y_RS18060 PF08278 DNA primase DnaG DnaB-binding Y_RS18065 PF04539 Sigma-70 region 3 Y_RS18065 PF04542 Sigma-70 region 2 Y_RS18065 PF00140 Sigma-70 factor, region 1.2 Y_RS18065 PF03979 Sigma-70 factor, region 1.1 Y_RS18065 PF04546 Sigma-70, non-essential region Y_RS18065 PF04545 Sigma-70, region 4 Y_RS18125 PF03466 LysR substrate binding domain Y_RS18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS18145 PF01042 Endoribonuclease L-PSP Y_RS18165 PF00155 Aminotransferase class I and II Y_RS18185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Y_RS18185 PF00529 HlyD membrane-fusion protein of T1SS Y_RS18190 PF04632 Fusaric acid resistance protein family Y_RS18200 PF01915 Glycosyl hydrolase family 3 C-terminal domain Y_RS18200 PF14310 Fibronectin type III-like domain Y_RS18200 PF00933 Glycosyl hydrolase family 3 N terminal domain Y_RS18210 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS18215 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS18220 PF01547 Bacterial extracellular solute-binding protein Y_RS18225 PF00356 Bacterial regulatory proteins, lacI family Y_RS18230 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Y_RS18235 PF03459 TOBE domain Y_RS18235 PF17912 MalK OB fold domain Y_RS18235 PF00005 ABC transporter Y_RS18255 PF05860 haemagglutination activity domain Y_RS18255 PF04829 Pre-toxin domain with VENN motif Y_RS18255 PF13332 Hemagglutinin repeat Y_RS18255 PF13018 Extended Signal Peptide of Type V secretion system Y_RS18265 PF13332 Hemagglutinin repeat Y_RS18265 PF04829 Pre-toxin domain with VENN motif Y_RS18270 PF04829 Pre-toxin domain with VENN motif Y_RS18270 PF13332 Hemagglutinin repeat Y_RS18280 PF13332 Hemagglutinin repeat Y_RS18280 PF05860 haemagglutination activity domain Y_RS18280 PF04829 Pre-toxin domain with VENN motif Y_RS18280 PF13018 Extended Signal Peptide of Type V secretion system Y_RS18285 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Y_RS18285 PF17287 POTRA domain Y_RS18285 PF08479 POTRA domain, ShlB-type Y_RS18290 PF00092 von Willebrand factor type A domain Y_RS18295 PF02342 TerD domain Y_RS18305 PF00092 von Willebrand factor type A domain Y_RS18325 PF03729 Short repeat of unknown function (DUF308) Y_RS18330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Y_RS18330 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS18335 PF05175 Methyltransferase small domain Y_RS18340 PF03797 Autotransporter beta-domain Y_RS18345 PF01863 Protein of unknown function DUF45 Y_RS18350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Y_RS18355 PF00375 Sodium:dicarboxylate symporter family Y_RS18360 PF01797 Transposase IS200 like Y_RS18365 PF10688 Bacterial inner membrane protein Y_RS18370 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Y_RS18370 PF08666 SAF domain Y_RS18375 PF08125 Mannitol dehydrogenase C-terminal domain Y_RS18375 PF01232 Mannitol dehydrogenase Rossmann domain Y_RS18380 PF02614 Glucuronate isomerase Y_RS18390 PF07690 Major Facilitator Superfamily Y_RS18395 PF00392 Bacterial regulatory proteins, gntR family Y_RS18395 PF07729 FCD domain Y_RS18405 PF09335 SNARE associated Golgi protein Y_RS18410 PF13721 SecD export protein N-terminal TM region Y_RS18425 PF05957 Bacterial protein of unknown function (DUF883) Y_RS18430 PF07332 Putative Actinobacterial Holin-X, holin superfamily III Y_RS18440 PF07681 DoxX Y_RS18445 PF13409 Glutathione S-transferase, N-terminal domain Y_RS18450 PF00665 Integrase core domain Y_RS18450 PF02796 Helix-turn-helix domain of resolvase Y_RS18455 PF01695 IstB-like ATP binding protein Y_RS18460 PF00293 NUDIX domain Y_RS18465 PF02810 SEC-C motif Y_RS18465 PF07517 SecA DEAD-like domain Y_RS18465 PF01043 SecA preprotein cross-linking domain Y_RS18465 PF07516 SecA Wing and Scaffold domain Y_RS18470 PF06558 Secretion monitor precursor protein (SecM) Y_RS18480 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Y_RS18485 PF00091 Tubulin/FtsZ family, GTPase domain Y_RS18485 PF12327 FtsZ family, C-terminal domain Y_RS18490 PF02491 SHS2 domain inserted in FTSA Y_RS18495 PF08478 POTRA domain, FtsQ-type Y_RS18495 PF03799 Cell division protein FtsQ Y_RS18500 PF07478 D-ala D-ala ligase C-terminus Y_RS18500 PF01820 D-ala D-ala ligase N-terminus Y_RS18505 PF01225 Mur ligase family, catalytic domain Y_RS18505 PF08245 Mur ligase middle domain Y_RS18505 PF02875 Mur ligase family, glutamate ligase domain Y_RS18510 PF04101 Glycosyltransferase family 28 C-terminal domain Y_RS18510 PF03033 Glycosyltransferase family 28 N-terminal domain Y_RS18515 PF01098 Cell cycle protein Y_RS18520 PF02875 Mur ligase family, glutamate ligase domain Y_RS18520 PF08245 Mur ligase middle domain Y_RS18525 PF00953 Glycosyl transferase family 4 Y_RS18525 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Y_RS18530 PF02875 Mur ligase family, glutamate ligase domain Y_RS18530 PF08245 Mur ligase middle domain Y_RS18530 PF01225 Mur ligase family, catalytic domain Y_RS18535 PF02875 Mur ligase family, glutamate ligase domain Y_RS18535 PF01225 Mur ligase family, catalytic domain Y_RS18535 PF08245 Mur ligase middle domain Y_RS18540 PF03717 Penicillin-binding Protein dimerisation domain Y_RS18540 PF00905 Penicillin binding protein transpeptidase domain Y_RS18545 PF04999 Cell division protein FtsL Y_RS18550 PF01795 MraW methylase family Y_RS18555 PF02381 MraZ protein, putative antitoxin-like Y_RS18560 PF06610 L-alanine exporter Y_RS18565 PF00356 Bacterial regulatory proteins, lacI family Y_RS18565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Y_RS18575 PF01797 Transposase IS200 like Y_RS18580 PF10369 Small subunit of acetolactate synthase Y_RS18585 PF00205 Thiamine pyrophosphate enzyme, central domain Y_RS18585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Y_RS18585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Y_RS18595 PF00501 AMP-binding enzyme Y_RS18605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS18605 PF03466 LysR substrate binding domain Y_RS18620 PF01797 Transposase IS200 like Y_RS18625 PF00682 HMGL-like Y_RS18625 PF08502 LeuA allosteric (dimerisation) domain Y_RS18630 PF00180 Isocitrate/isopropylmalate dehydrogenase Y_RS18635 PF00330 Aconitase family (aconitate hydratase) Y_RS18640 PF00694 Aconitase C-terminal domain Y_RS18645 PF07690 Major Facilitator Superfamily Y_RS18655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y_RS18655 PF12793 Sugar transport-related sRNA regulator N-term Y_RS18670 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS18675 PF00005 ABC transporter Y_RS18680 PF09335 SNARE associated Golgi protein Y_RS18685 PF03104 DNA polymerase family B, exonuclease domain Y_RS18685 PF00136 DNA polymerase family B Y_RS18690 PF18337 RapA N-terminal Tudor like domain Y_RS18690 PF12137 RNA polymerase recycling family C-terminal Y_RS18690 PF00176 SNF2 family N-terminal domain Y_RS18690 PF18339 RapA N-terminal Tudor like domain 1 Y_RS18690 PF00271 Helicase conserved C-terminal domain Y_RS18700 PF06744 Type VI secretion protein IcmF C-terminal Y_RS18700 PF14331 ImcF-related N-terminal domain Y_RS18700 PF06761 Intracellular multiplication and human macrophage-killing Y_RS18705 PF00691 OmpA family Y_RS18705 PF05736 OprF membrane domain Y_RS18710 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE Y_RS18740 PF06715 Gp5 C-terminal repeat (3 copies) Y_RS18740 PF04717 Type VI secretion system, phage-baseplate injector Y_RS18745 PF07724 AAA domain (Cdc48 subfamily) Y_RS18745 PF00004 ATPase family associated with various cellular activities (AAA) Y_RS18745 PF17871 AAA lid domain Y_RS18745 PF10431 C-terminal, D2-small domain, of ClpB protein Y_RS18755 PF05947 Type VI secretion system, TssF Y_RS18770 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Y_RS18775 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 Y_RS18790 PF00849 RNA pseudouridylate synthase Y_RS18795 PF00226 DnaJ domain Y_RS18795 PF05099 Tellurite resistance protein TerB Y_RS18800 PF04453 LPS transport system D Y_RS18800 PF03968 OstA-like protein Y_RS18805 PF00639 PPIC-type PPIASE domain Y_RS18805 PF09312 SurA N-terminal domain Y_RS18810 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Y_RS18815 PF00398 Ribosomal RNA adenine dimethylase Y_RS18820 PF04379 ApaG domain Y_RS18825 PF00149 Calcineurin-like phosphoesterase Y_RS18840 PF01797 Transposase IS200 like Y_RS18850 PF00186 Dihydrofolate reductase Y_RS18855 PF12821 Threonine/Serine exporter, ThrE Y_RS18860 PF06738 Putative threonine/serine exporter Y_RS18865 PF01810 LysE type translocator Y_RS18870 PF02142 MGS-like domain Y_RS18870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Y_RS18870 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Y_RS18875 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Y_RS18875 PF00117 Glutamine amidotransferase class-I Y_RS18880 PF01113 Dihydrodipicolinate reductase, N-terminus Y_RS18880 PF05173 Dihydrodipicolinate reductase, C-terminus Y_RS18885 PF01797 Transposase IS200 like Y_RS18900 PF02401 LytB protein Y_RS18905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Y_RS18910 PF01252 Signal peptidase (SPase) II Y_RS18915 PF00133 tRNA synthetases class I (I, L, M and V) Y_RS18915 PF06827 Zinc finger found in FPG and IleRS Y_RS18915 PF08264 Anticodon-binding domain of tRNA Y_RS18920 PF06574 FAD synthetase Y_RS18920 PF01687 Riboflavin kinase Y_RS18930 PF01649 Ribosomal protein S20 Y_RS18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Y_RS18935 PF03466 LysR substrate binding domain Y_RS18940 PF06965 Na+/H+ antiporter 1 Y_RS18945 PF00684 DnaJ central domain Y_RS18945 PF01556 DnaJ C terminal domain Y_RS18945 PF00226 DnaJ domain Y_RS18950 PF00012 Hsp70 protein Y_RS18955 PF01184 GPR1/FUN34/yaaH family Y_RS18965 PF07690 Major Facilitator Superfamily Y_RS18970 PF00994 Probable molybdopterin binding domain Y_RS18975 PF00923 Transaldolase/Fructose-6-phosphate aldolase Y_RS18980 PF03883 Peroxide stress protein YaaA Y_RS18985 PF14821 Threonine synthase N terminus Y_RS18985 PF00291 Pyridoxal-phosphate dependent enzyme Y_RS18990 PF00288 GHMP kinases N terminal domain Y_RS18990 PF08544 GHMP kinases C terminal Y_RS18995 PF13840 ACT domain Y_RS18995 PF01842 ACT domain Y_RS18995 PF00696 Amino acid kinase family Y_RS18995 PF00742 Homoserine dehydrogenase Y_RS18995 PF03447 Homoserine dehydrogenase, NAD binding domain Y_RS19000 PF00072 Response regulator receiver domain Y_RS19000 PF00486 Transcriptional regulatory protein, C terminal Y_RS19005 PF05981 CreA protein Y_RS19010 PF06445 GyrI-like small molecule binding domain Y_RS19010 PF12833 Helix-turn-helix domain Y_RS19015 PF00300 Histidine phosphatase superfamily (branch 1) Y_RS19020 PF01931 Protein of unknown function DUF84 Y_RS19025 PF01371 Trp repressor protein Y_RS19030 PF01464 Transglycosylase SLT domain Y_RS19030 PF14718 Soluble lytic murein transglycosylase L domain Y_RS19035 PF00690 Cation transporter/ATPase, N-terminus Y_RS19035 PF00689 Cation transporting ATPase, C-terminus Y_RS19045 PF00990 Diguanylate cyclase, GGDEF domain Y_RS19045 PF17152 Periplasmic sensor domain Y_RS19050 PF00691 OmpA family Y_RS19060 PF00665 Integrase core domain Y_RS19060 PF02796 Helix-turn-helix domain of resolvase Y_RS19065 PF01695 IstB-like ATP binding protein Y_RS19070 PF12848 ABC transporter Y_RS19070 PF00005 ABC transporter Y_RS19075 PF02661 Fic/DOC family Y_RS19085 PF18073 Rubredoxin metal binding domain Y_RS19090 PF18429 Domain of unknown function (DUF5609) Y_RS19095 PF10144 Bacterial virulence factor haemolysin Y_RS19100 PF01048 Phosphorylase superfamily Y_RS19105 PF01676 Metalloenzyme superfamily Y_RS19110 PF02885 Glycosyl transferase family, helical bundle domain Y_RS19110 PF00591 Glycosyl transferase family, a/b domain Y_RS19110 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Y_RS19115 PF02885 Glycosyl transferase family, helical bundle domain Y_RS19115 PF00591 Glycosyl transferase family, a/b domain Y_RS19115 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Y_RS19120 PF01791 DeoC/LacD family aldolase Y_RS19125 PF01773 Na+ dependent nucleoside transporter N-terminus Y_RS19125 PF07670 Nucleoside recognition Y_RS19125 PF07662 Na+ dependent nucleoside transporter C-terminus Y_RS19130 PF01026 TatD related DNase Y_RS19135 PF01734 Patatin-like phospholipase Y_RS19140 PF07043 Protein of unknown function (DUF1328) Y_RS19145 PF04972 BON domain Y_RS19150 PF16658 Class II release factor RF3, C-terminal domain Y_RS19150 PF03144 Elongation factor Tu domain 2 Y_RS19150 PF00009 Elongation factor Tu GTP binding domain Y_RS19155 PF00583 Acetyltransferase (GNAT) family Y_RS19160 PF03603 DNA polymerase III psi subunit Y_RS19165 PF08468 Methyltransferase small domain N-terminal Y_RS19165 PF05175 Methyltransferase small domain Y_RS19175 PF07256 Protein of unknown function (DUF1435) Y_RS19180 PF00990 Diguanylate cyclase, GGDEF domain Y_RS19185 PF01095 Pectinesterase Y_RS19205 PF00873 AcrB/AcrD/AcrF family Y_RS19210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Y_RS19230 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Y_RS19235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y_RS19235 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y_RS19250 PF00005 ABC transporter Y_RS19255 PF02653 Branched-chain amino acid transport system / permease component Y_RS19260 PF02653 Branched-chain amino acid transport system / permease component Y_RS19265 PF13407 Periplasmic binding protein domain Y_RS19270 PF01791 DeoC/LacD family aldolase Y_RS19275 PF03992 Antibiotic biosynthesis monooxygenase Y_RS19280 PF10696 Protein of unknown function (DUF2501) Y_RS19285 PF05524 PEP-utilising enzyme, N-terminal Y_RS19285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Y_RS19285 PF02896 PEP-utilising enzyme, TIM barrel domain Y_RS19285 PF00381 PTS HPr component phosphorylation site Y_RS19285 PF00391 PEP-utilising enzyme, mobile domain Y_RS19295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Y_RS19300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Y_RS19305 PF12833 Helix-turn-helix domain Y_RS19315 PF05987 Bacterial protein of unknown function (DUF898) Y_RS19340 PF00665 Integrase core domain Y_RS19365 PF01555 DNA methylase Y_RS19370 PF01527 Transposase Y_RS19385 PF12102 Domain of unknown function (DUF3578) Y_RS19385 PF07728 AAA domain (dynein-related subfamily) Y_RS19390 PF00665 Integrase core domain Y_RS19390 PF02796 Helix-turn-helix domain of resolvase Y_RS19395 PF01695 IstB-like ATP binding protein Y_RS19400 PF02580 D-Tyr-tRNA(Tyr) deacylase Y_RS19405 PF03631 Virulence factor BrkB Y_RS19410 PF13419 Haloacid dehalogenase-like hydrolase Y_RS19415 PF00679 Elongation factor G C-terminus Y_RS19415 PF03144 Elongation factor Tu domain 2 Y_RS19415 PF00009 Elongation factor Tu GTP binding domain Y_RS19425 PF00120 Glutamine synthetase, catalytic domain Y_RS19425 PF03951 Glutamine synthetase, beta-Grasp domain Y_RS19430 PF00512 His Kinase A (phospho-acceptor) domain Y_RS19430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS19430 PF00989 PAS fold Y_RS19435 PF00072 Response regulator receiver domain Y_RS19435 PF00158 Sigma-54 interaction domain Y_RS19435 PF02954 Bacterial regulatory protein, Fis family Y_RS19440 PF06969 HemN C-terminal domain Y_RS19440 PF04055 Radical SAM superfamily Y_RS19445 PF04220 Der GTPase activator (YihI) Y_RS19450 PF01926 50S ribosome-binding GTPase Y_RS19455 PF01797 Transposase IS200 like Y_RS19465 PF00476 DNA polymerase family A Y_RS19465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Y_RS19465 PF01367 5'-3' exonuclease, C-terminal SAM fold Y_RS19465 PF01612 3'-5' exonuclease Y_RS19470 PF01323 DSBA-like thioredoxin domain Y_RS19475 PF01636 Phosphotransferase enzyme family Y_RS19480 PF06288 Protein of unknown function (DUF1040) Y_RS19485 PF12804 MobA-like NTP transferase domain Y_RS19490 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Y_RS19495 PF00872 Transposase, Mutator family Y_RS19525 PF02796 Helix-turn-helix domain of resolvase Y_RS19525 PF00665 Integrase core domain Y_RS19530 PF01695 IstB-like ATP binding protein Y_RS19535 PF07730 Histidine kinase Y_RS19535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS19535 PF05231 MASE1 Y_RS19540 PF07690 Major Facilitator Superfamily Y_RS19550 PF13332 Hemagglutinin repeat Y_RS19550 PF04829 Pre-toxin domain with VENN motif Y_RS19550 PF05594 Haemagluttinin repeat Y_RS19550 PF05860 haemagglutination activity domain Y_RS19555 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Y_RS19555 PF08479 POTRA domain, ShlB-type Y_RS19555 PF17287 POTRA domain Y_RS19565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y_RS19570 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS19575 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS19575 PF12911 N-terminal TM domain of oligopeptide transport permease C Y_RS19580 PF00005 ABC transporter Y_RS19580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y_RS19585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y_RS19585 PF00005 ABC transporter Y_RS19590 PF01270 Glycosyl hydrolases family 8 Y_RS19595 PF00563 EAL domain Y_RS19595 PF00990 Diguanylate cyclase, GGDEF domain Y_RS19595 PF17154 Gammaproteobacterial periplasmic sensor domain Y_RS19595 PF00672 HAMP domain Y_RS19600 PF06178 Oligogalacturonate-specific porin protein (KdgM) Y_RS19605 PF06917 Periplasmic pectate lyase Y_RS19615 PF00375 Sodium:dicarboxylate symporter family Y_RS19620 PF05193 Peptidase M16 inactive domain Y_RS19620 PF00675 Insulinase (Peptidase family M16) Y_RS19625 PF00294 pfkB family carbohydrate kinase Y_RS19630 PF01361 Tautomerase enzyme Y_RS19635 PF00563 EAL domain Y_RS19640 PF05170 AsmA family Y_RS19645 PF02611 CDP-diacylglycerol pyrophosphatase Y_RS19650 PF03631 Virulence factor BrkB Y_RS19675 PF02595 Glycerate kinase family Y_RS19680 PF02447 GntP family permease Y_RS19685 PF17853 GGDEF-like domain Y_RS19685 PF05651 Putative sugar diacid recognition Y_RS19685 PF13556 PucR C-terminal helix-turn-helix domain Y_RS19690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y_RS19690 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS19695 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Y_RS19700 PF01432 Peptidase family M3 Y_RS19705 PF04445 Putative SAM-dependent methyltransferase Y_RS19710 PF00413 Matrixin Y_RS19710 PF08548 Peptidase M10 serralysin C terminal Y_RS19710 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Y_RS19715 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Y_RS19715 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Y_RS19720 PF00582 Universal stress protein family Y_RS19725 PF10625 Universal stress protein B (UspB) Y_RS19730 PF01797 Transposase IS200 like Y_RS19740 PF01384 Phosphate transporter family Y_RS19750 PF08448 PAS fold Y_RS19750 PF00512 His Kinase A (phospho-acceptor) domain Y_RS19750 PF00072 Response regulator receiver domain Y_RS19750 PF13188 PAS domain Y_RS19750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS19755 PF00005 ABC transporter Y_RS19760 PF02653 Branched-chain amino acid transport system / permease component Y_RS19765 PF13407 Periplasmic binding protein domain Y_RS19775 PF01116 Fructose-bisphosphate aldolase class-II Y_RS19785 PF00072 Response regulator receiver domain Y_RS19785 PF00486 Transcriptional regulatory protein, C terminal Y_RS19795 PF02678 Pirin Y_RS19795 PF17954 Quercetinase C-terminal cupin domain Y_RS19800 PF00356 Bacterial regulatory proteins, lacI family Y_RS19800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Y_RS19805 PF02447 GntP family permease Y_RS19810 PF01202 Shikimate kinase Y_RS19830 PF01914 MarC family integral membrane protein Y_RS19835 PF02774 Semialdehyde dehydrogenase, dimerisation domain Y_RS19835 PF01118 Semialdehyde dehydrogenase, NAD binding domain Y_RS19860 PF11924 Inverse autotransporter, beta-domain Y_RS19860 PF02369 Bacterial Ig-like domain (group 1) Y_RS19860 PF07979 Intimin C-type lectin domain Y_RS19860 PF09134 Invasin, domain 3 Y_RS19865 PF06580 Histidine kinase Y_RS19865 PF07694 5TMR of 5TMR-LYT Y_RS19870 PF02806 Alpha amylase, C-terminal all-beta domain Y_RS19870 PF00128 Alpha amylase, catalytic domain Y_RS19870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Y_RS19875 PF18390 Glycogen debranching enzyme C-terminal domain Y_RS19875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Y_RS19875 PF00128 Alpha amylase, catalytic domain Y_RS19880 PF00483 Nucleotidyl transferase Y_RS19885 PF00534 Glycosyl transferases group 1 Y_RS19885 PF08323 Starch synthase catalytic domain Y_RS19890 PF00343 Carbohydrate phosphorylase Y_RS19895 PF01266 FAD dependent oxidoreductase Y_RS19895 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Y_RS19915 PF00665 Integrase core domain Y_RS19915 PF13333 Integrase core domain Y_RS19915 PF13276 HTH-like domain Y_RS19925 PF08220 DeoR-like helix-turn-helix domain Y_RS19925 PF00455 DeoR C terminal sensor domain Y_RS19930 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease Y_RS19930 PF01694 Rhomboid family Y_RS19935 PF00581 Rhodanese-like domain Y_RS19940 PF17874 MalT-like TPR region Y_RS19940 PF00196 Bacterial regulatory proteins, luxR family Y_RS19945 PF00343 Carbohydrate phosphorylase Y_RS19950 PF00343 Carbohydrate phosphorylase Y_RS19955 PF02446 4-alpha-glucanotransferase Y_RS19960 PF01106 NifU-like domain Y_RS19960 PF01521 Iron-sulphur cluster biosynthesis Y_RS19965 PF00156 Phosphoribosyl transferase domain Y_RS19975 PF07338 Protein of unknown function (DUF1471) Y_RS19980 PF09012 FeoC like transcriptional regulator Y_RS19985 PF17910 FeoB cytosolic helical domain Y_RS19985 PF07664 Ferrous iron transport protein B C terminus Y_RS19985 PF02421 Ferrous iron transport protein B Y_RS19985 PF07670 Nucleoside recognition Y_RS19990 PF04023 FeoA domain Y_RS20000 PF09371 Tex-like protein N-terminal domain Y_RS20000 PF16921 Tex protein YqgF-like domain Y_RS20000 PF00575 S1 RNA binding domain Y_RS20000 PF17674 HHH domain Y_RS20005 PF03449 Transcription elongation factor, N-terminal Y_RS20005 PF01272 Transcription elongation factor, GreA/GreB, C-term Y_RS20010 PF00072 Response regulator receiver domain Y_RS20010 PF00486 Transcriptional regulatory protein, C terminal Y_RS20015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS20015 PF00512 His Kinase A (phospho-acceptor) domain Y_RS20015 PF00672 HAMP domain Y_RS20020 PF01293 Phosphoenolpyruvate carboxykinase Y_RS20025 PF01430 Hsp33 protein Y_RS20030 PF01479 S4 domain Y_RS20035 PF13419 Haloacid dehalogenase-like hydrolase Y_RS20040 PF07095 Intracellular growth attenuator protein IgaA Y_RS20050 PF00293 NUDIX domain Y_RS20055 PF17092 Penicillin-binding protein OB-like domain Y_RS20055 PF00912 Transglycosylase Y_RS20055 PF00905 Penicillin binding protein transpeptidase domain Y_RS20085 PF03958 Bacterial type II/III secretion system short domain Y_RS20085 PF00263 Bacterial type II and III secretion system protein Y_RS20090 PF01202 Shikimate kinase Y_RS20095 PF01761 3-dehydroquinate synthase Y_RS20100 PF05036 Sporulation related domain Y_RS20105 PF02086 D12 class N6 adenine-specific DNA methyltransferase Y_RS20110 PF00834 Ribulose-phosphate 3 epimerase family Y_RS20115 PF13419 Haloacid dehalogenase-like hydrolase Y_RS20120 PF00579 tRNA synthetases class I (W and Y) Y_RS20125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Y_RS20125 PF14824 Sirohaem biosynthesis protein central Y_RS20125 PF10414 Sirohaem synthase dimerisation region Y_RS20130 PF01226 Formate/nitrite transporter Y_RS20135 PF13806 Rieske-like [2Fe-2S] domain Y_RS20140 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y_RS20140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Y_RS20140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Y_RS20140 PF04324 BFD-like [2Fe-2S] binding domain Y_RS20140 PF18267 Rubredoxin NAD+ reductase C-terminal domain Y_RS20145 PF07969 Amidohydrolase family Y_RS20150 PF07690 Major Facilitator Superfamily Y_RS20160 PF00356 Bacterial regulatory proteins, lacI family Y_RS20165 PF11975 Family 4 glycosyl hydrolase C-terminal domain Y_RS20165 PF02056 Family 4 glycosyl hydrolase Y_RS20170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Y_RS20175 PF05872 Bacterial protein of unknown function (DUF853) Y_RS20180 PF00117 Glutamine amidotransferase class-I Y_RS20185 PF00202 Aminotransferase class-III Y_RS20190 PF12805 FUSC-like inner membrane protein yccS Y_RS20195 PF13545 Crp-like helix-turn-helix domain Y_RS20195 PF00027 Cyclic nucleotide-binding domain Y_RS20200 PF02566 OsmC-like protein Y_RS20210 PF00485 Phosphoribulokinase / Uridine kinase family Y_RS20215 PF06794 Uncharacterised protein family (UPF0270) Y_RS20220 PF00561 alpha/beta hydrolase fold Y_RS20225 PF01810 LysE type translocator Y_RS20230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Y_RS20235 PF00005 ABC transporter Y_RS20240 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS20245 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Y_RS20255 PF00535 Glycosyl transferase family 2 Y_RS20265 PF02525 Flavodoxin-like fold Y_RS20270 PF00999 Sodium/hydrogen exchanger family Y_RS20270 PF02254 TrkA-N domain Y_RS20275 PF09526 Probable metal-binding protein (DUF2387) Y_RS20280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Y_RS20285 PF04102 SlyX Y_RS20290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Y_RS20290 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Y_RS20295 PF08348 YheO-like PAS domain Y_RS20295 PF13309 HTH domain Y_RS20300 PF02635 DsrE/DsrF-like family Y_RS20305 PF02635 DsrE/DsrF-like family Y_RS20310 PF04077 DsrH like protein Y_RS20315 PF00164 Ribosomal protein S12/S23 Y_RS20320 PF00177 Ribosomal protein S7p/S5e Y_RS20325 PF00679 Elongation factor G C-terminus Y_RS20325 PF03764 Elongation factor G, domain IV Y_RS20325 PF14492 Elongation Factor G, domain II Y_RS20325 PF00009 Elongation factor Tu GTP binding domain Y_RS20325 PF03144 Elongation factor Tu domain 2 Y_RS20330 PF03144 Elongation factor Tu domain 2 Y_RS20330 PF00009 Elongation factor Tu GTP binding domain Y_RS20330 PF03143 Elongation factor Tu C-terminal domain Y_RS20335 PF01797 Transposase IS200 like Y_RS20340 PF04324 BFD-like [2Fe-2S] binding domain Y_RS20345 PF00210 Ferritin-like domain Y_RS20350 PF00338 Ribosomal protein S10p/S20e Y_RS20355 PF00297 Ribosomal protein L3 Y_RS20360 PF00573 Ribosomal protein L4/L1 family Y_RS20365 PF00276 Ribosomal protein L23 Y_RS20370 PF00181 Ribosomal Proteins L2, RNA binding domain Y_RS20370 PF03947 Ribosomal Proteins L2, C-terminal domain Y_RS20375 PF00203 Ribosomal protein S19 Y_RS20380 PF00237 Ribosomal protein L22p/L17e Y_RS20385 PF07650 KH domain Y_RS20385 PF00189 Ribosomal protein S3, C-terminal domain Y_RS20390 PF00252 Ribosomal protein L16p/L10e Y_RS20395 PF00831 Ribosomal L29 protein Y_RS20400 PF00366 Ribosomal protein S17 Y_RS20405 PF00238 Ribosomal protein L14p/L23e Y_RS20410 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Y_RS20410 PF00467 KOW motif Y_RS20415 PF00673 ribosomal L5P family C-terminus Y_RS20415 PF00281 Ribosomal protein L5 Y_RS20420 PF00253 Ribosomal protein S14p/S29e Y_RS20425 PF00410 Ribosomal protein S8 Y_RS20430 PF00347 Ribosomal protein L6 Y_RS20435 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Y_RS20440 PF00333 Ribosomal protein S5, N-terminal domain Y_RS20440 PF03719 Ribosomal protein S5, C-terminal domain Y_RS20445 PF00327 Ribosomal protein L30p/L7e Y_RS20450 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Y_RS20455 PF00344 SecY translocase Y_RS20460 PF00444 Ribosomal protein L36 Y_RS20465 PF00416 Ribosomal protein S13/S18 Y_RS20470 PF00411 Ribosomal protein S11 Y_RS20475 PF00163 Ribosomal protein S4/S9 N-terminal domain Y_RS20475 PF01479 S4 domain Y_RS20480 PF01000 RNA polymerase Rpb3/RpoA insert domain Y_RS20480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Y_RS20480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Y_RS20485 PF01196 Ribosomal protein L17 Y_RS20490 PF13411 MerR HTH family regulatory protein Y_RS20495 PF03889 Alternative ribosome-rescue factor A Y_RS20500 PF01741 Large-conductance mechanosensitive channel, MscL Y_RS20505 PF02080 TrkA-C domain Y_RS20505 PF02254 TrkA-N domain Y_RS20510 PF01029 NusB family Y_RS20510 PF01189 16S rRNA methyltransferase RsmB/F Y_RS20515 PF02911 Formyl transferase, C-terminal domain Y_RS20515 PF00551 Formyl transferase Y_RS20520 PF01327 Polypeptide deformylase Y_RS20525 PF02481 DNA recombination-mediator protein A Y_RS20525 PF17782 DprA winged helix domain Y_RS20530 PF04361 Protein of unknown function (DUF494) Y_RS20535 PF01396 Topoisomerase DNA binding C4 zinc finger Y_RS20540 PF01300 Telomere recombination Y_RS20545 PF08501 Shikimate dehydrogenase substrate binding domain Y_RS20545 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Y_RS20545 PF01488 Shikimate / quinate 5-dehydrogenase Y_RS20550 PF00132 Bacterial transferase hexapeptide (six repeats) Y_RS20555 PF01695 IstB-like ATP binding protein Y_RS20560 PF02796 Helix-turn-helix domain of resolvase Y_RS20560 PF00665 Integrase core domain Y_RS20565 PF05231 MASE1 Y_RS20565 PF07730 Histidine kinase Y_RS20565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS20570 PF00196 Bacterial regulatory proteins, luxR family Y_RS20570 PF00072 Response regulator receiver domain Y_RS20575 PF08019 Phosphoethanolamine transferase EptA/EptB Y_RS20575 PF00884 Sulfatase Y_RS20585 PF12146 Serine aminopeptidase, S33 Y_RS20590 PF00324 Amino acid permease Y_RS20595 PF00221 Aromatic amino acid lyase Y_RS20600 PF17392 Urocanase C-terminal domain Y_RS20600 PF01175 Urocanase Rossmann-like domain Y_RS20600 PF17391 Urocanase N-terminal domain Y_RS20605 PF00291 Pyridoxal-phosphate dependent enzyme Y_RS20610 PF00156 Phosphoribosyl transferase domain Y_RS20625 PF01497 Periplasmic binding protein Y_RS20630 PF01032 FecCD transport family Y_RS20635 PF01032 FecCD transport family Y_RS20640 PF00005 ABC transporter Y_RS20660 PF13737 Transposase DDE domain Y_RS20665 PF13737 Transposase DDE domain Y_RS20670 PF04606 Ogr/Delta-like zinc finger Y_RS20680 PF00589 Phage integrase family Y_RS20680 PF14659 Phage integrase, N-terminal SAM-like domain Y_RS20680 PF13356 Arm DNA-binding domain Y_RS20685 PF12833 Helix-turn-helix domain Y_RS20690 PF02653 Branched-chain amino acid transport system / permease component Y_RS20695 PF00005 ABC transporter Y_RS20700 PF13407 Periplasmic binding protein domain Y_RS20710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y_RS20710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y_RS20720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Y_RS20720 PF02753 Pili assembly chaperone PapD, C-terminal domain Y_RS20735 PF00419 Fimbrial protein Y_RS20740 PF01757 Acyltransferase family Y_RS20755 PF13333 Integrase core domain Y_RS20755 PF00665 Integrase core domain Y_RS20755 PF13276 HTH-like domain Y_RS20760 PF07690 Major Facilitator Superfamily Y_RS20785 PF01526 Tn3 transposase DDE domain Y_RS20785 PF13700 Domain of unknown function (DUF4158) Y_RS20790 PF09107 Elongation factor SelB, winged helix Y_RS20790 PF00009 Elongation factor Tu GTP binding domain Y_RS20790 PF03144 Elongation factor Tu domain 2 Y_RS20790 PF09106 Elongation factor SelB, winged helix Y_RS20795 PF03841 L-seryl-tRNA selenium transferase Y_RS20795 PF12390 Selenocysteine synthase N terminal Y_RS20800 PF04216 Protein involved in formate dehydrogenase formation Y_RS20805 PF01292 Prokaryotic cytochrome b561 Y_RS20810 PF13247 4Fe-4S dicluster domain Y_RS20810 PF09163 Formate dehydrogenase N, transmembrane Y_RS20815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Y_RS20815 PF01568 Molydopterin dinucleotide binding domain Y_RS20815 PF00384 Molybdopterin oxidoreductase Y_RS20820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Y_RS20820 PF00384 Molybdopterin oxidoreductase Y_RS20820 PF01568 Molydopterin dinucleotide binding domain Y_RS20825 PF02634 FdhD/NarQ family Y_RS20830 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Y_RS20830 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Y_RS20835 PF02203 Tar ligand binding domain homologue Y_RS20835 PF00672 HAMP domain Y_RS20835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y_RS20850 PF10928 Protein of unknown function (DUF2810) Y_RS20855 PF05068 Mannitol repressor Y_RS20860 PF08125 Mannitol dehydrogenase C-terminal domain Y_RS20860 PF01232 Mannitol dehydrogenase Rossmann domain Y_RS20865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Y_RS20865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Y_RS20865 PF02378 Phosphotransferase system, EIIC Y_RS20870 PF11254 Protein of unknown function (DUF3053) Y_RS20875 PF05746 DALR anticodon binding domain Y_RS20875 PF02092 Glycyl-tRNA synthetase beta subunit Y_RS20880 PF02091 Glycyl-tRNA synthetase alpha subunit Y_RS20885 PF03352 Methyladenine glycosylase Y_RS20895 PF00691 OmpA family Y_RS20895 PF13488 Glycine zipper Y_RS20905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y_RS20905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Y_RS20910 PF00128 Alpha amylase, catalytic domain Y_RS20920 PF00155 Aminotransferase class I and II Y_RS20925 PF06826 Predicted Permease Membrane Region Y_RS20925 PF02080 TrkA-C domain Y_RS20930 PF00011 Hsp20/alpha crystallin family Y_RS20935 PF00011 Hsp20/alpha crystallin family Y_RS20940 PF07119 Protein of unknown function (DUF1375) Y_RS20945 PF07676 WD40-like Beta Propeller Repeat Y_RS20945 PF12566 Protein of unknown function (DUF3748) Y_RS20950 PF12566 Protein of unknown function (DUF3748) Y_RS20950 PF07676 WD40-like Beta Propeller Repeat Y_RS20955 PF13291 ACT domain Y_RS20955 PF00291 Pyridoxal-phosphate dependent enzyme Y_RS20960 PF02423 Ornithine cyclodeaminase/mu-crystallin family Y_RS20970 PF13276 HTH-like domain Y_RS20970 PF13333 Integrase core domain Y_RS20970 PF00665 Integrase core domain Y_RS20980 PF00986 DNA gyrase B subunit, carboxyl terminus Y_RS20980 PF18053 DNA gyrase B subunit insert domain Y_RS20980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y_RS20980 PF01751 Toprim domain Y_RS20980 PF00204 DNA gyrase B Y_RS20985 PF02463 RecF/RecN/SMC N terminal domain Y_RS20995 PF02768 DNA polymerase III beta subunit, C-terminal domain Y_RS20995 PF00712 DNA polymerase III beta subunit, N-terminal domain Y_RS20995 PF02767 DNA polymerase III beta subunit, central domain Y_RS21000 PF00308 Bacterial dnaA protein Y_RS21000 PF08299 Bacterial dnaA protein helix-turn-helix Y_RS21000 PF11638 DnaA N-terminal domain Y_RS21005 PF00468 Ribosomal protein L34 Y_RS21010 PF00825 Ribonuclease P Y_RS21015 PF02096 60Kd inner membrane protein Y_RS21015 PF14849 YidC periplasmic domain Y_RS21020 PF01926 50S ribosome-binding GTPase Y_RS21020 PF12631 MnmE helical domain Y_RS21020 PF10396 GTP-binding protein TrmE N-terminus Y_RS21025 PF12241 Trans-2-enoyl-CoA reductase catalytic region Y_RS21025 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Y_RS21025 PF07055 Enoyl reductase FAD binding domain Y_RS21040 PF00860 Permease family Y_RS21045 PF13419 Haloacid dehalogenase-like hydrolase Y_RS21050 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS21055 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS21060 PF00497 Bacterial extracellular solute-binding proteins, family 3 Y_RS21070 PF01895 PhoU domain Y_RS21075 PF00005 ABC transporter Y_RS21080 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS21085 PF00528 Binding-protein-dependent transport system inner membrane component Y_RS21090 PF12849 PBP superfamily domain Y_RS21095 PF01380 SIS domain Y_RS21100 PF00132 Bacterial transferase hexapeptide (six repeats) Y_RS21100 PF12804 MobA-like NTP transferase domain Y_RS21105 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Y_RS21105 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Y_RS21110 PF02874 ATP synthase alpha/beta family, beta-barrel domain Y_RS21110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y_RS21115 PF00231 ATP synthase Y_RS21120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y_RS21120 PF02874 ATP synthase alpha/beta family, beta-barrel domain Y_RS21120 PF00306 ATP synthase alpha/beta chain, C terminal domain Y_RS21125 PF00213 ATP synthase delta (OSCP) subunit Y_RS21130 PF00430 ATP synthase B/B' CF(0) Y_RS21135 PF00137 ATP synthase subunit C Y_RS21140 PF00119 ATP synthase A chain Y_RS21145 PF03899 ATP synthase I chain Y_RS21150 PF02527 rRNA small subunit methyltransferase G Y_RS21155 PF01134 Glucose inhibited division protein A Y_RS21155 PF13932 GidA associated domain Y_RS21205 PF17868 AAA lid domain Y_RS21205 PF07728 AAA domain (dynein-related subfamily) Y_RS21205 PF12592 Protein of unknown function (DUF3763) Y_RS21215 PF02705 K+ potassium transporter Y_RS21305 PF04204 Homoserine O-succinyltransferase Y_RS21320 PF01274 Malate synthase Y_RS21350 PF02965 Vitamin B12 dependent methionine synthase, activation domain Y_RS21350 PF02574 Homocysteine S-methyltransferase Y_RS21350 PF02310 B12 binding domain Y_RS21350 PF02607 B12 binding domain Y_RS21350 PF00809 Pterin binding enzyme Y_RS21360 PF02310 B12 binding domain Y_RS21360 PF02607 B12 binding domain Y_RS21360 PF02965 Vitamin B12 dependent methionine synthase, activation domain Y_RS21360 PF00809 Pterin binding enzyme Y_RS21360 PF02574 Homocysteine S-methyltransferase Y_RS21370 PF02310 B12 binding domain Y_RS21370 PF02574 Homocysteine S-methyltransferase Y_RS21370 PF00809 Pterin binding enzyme Y_RS21370 PF02965 Vitamin B12 dependent methionine synthase, activation domain Y_RS21370 PF02607 B12 binding domain Y_RS21575 PF03737 Aldolase/RraA Y_RS21735 PF02441 Flavoprotein Y_RS21735 PF04127 DNA / pantothenate metabolism flavoprotein Y_RS21745 PF04127 DNA / pantothenate metabolism flavoprotein Y_RS21745 PF02441 Flavoprotein