locus-tag class description ISU60_RS00005 PF00308 Bacterial dnaA protein ISU60_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ISU60_RS00005 PF11638 DnaA N-terminal domain ISU60_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ISU60_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ISU60_RS00010 PF02767 DNA polymerase III beta subunit, central domain ISU60_RS00020 PF02463 RecF/RecN/SMC N terminal domain ISU60_RS00025 PF18053 DNA gyrase B subunit insert domain ISU60_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS00025 PF01751 Toprim domain ISU60_RS00025 PF00204 DNA gyrase B ISU60_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus ISU60_RS00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family ISU60_RS00045 PF13291 ACT domain ISU60_RS00045 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_RS00055 PF07119 Protein of unknown function (DUF1375) ISU60_RS00060 PF00011 Hsp20/alpha crystallin family ISU60_RS00065 PF00011 Hsp20/alpha crystallin family ISU60_RS00070 PF02080 TrkA-C domain ISU60_RS00070 PF06826 Predicted Permease Membrane Region ISU60_RS00075 PF00155 Aminotransferase class I and II ISU60_RS00085 PF00128 Alpha amylase, catalytic domain ISU60_RS00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_RS00090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_RS00100 PF13488 Glycine zipper ISU60_RS00100 PF00691 OmpA family ISU60_RS00110 PF03352 Methyladenine glycosylase ISU60_RS00115 PF02091 Glycyl-tRNA synthetase alpha subunit ISU60_RS00120 PF05746 DALR anticodon binding domain ISU60_RS00120 PF02092 Glycyl-tRNA synthetase beta subunit ISU60_RS00130 PF11254 Protein of unknown function (DUF3053) ISU60_RS00135 PF02378 Phosphotransferase system, EIIC ISU60_RS00135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_RS00135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_RS00140 PF01232 Mannitol dehydrogenase Rossmann domain ISU60_RS00140 PF08125 Mannitol dehydrogenase C-terminal domain ISU60_RS00145 PF05068 Mannitol repressor ISU60_RS00150 PF10928 Protein of unknown function (DUF2810) ISU60_RS00165 PF00672 HAMP domain ISU60_RS00165 PF02203 Tar ligand binding domain homologue ISU60_RS00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_RS00170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU60_RS00170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU60_RS00175 PF02634 FdhD/NarQ family ISU60_RS00185 PF13247 4Fe-4S dicluster domain ISU60_RS00185 PF09163 Formate dehydrogenase N, transmembrane ISU60_RS00190 PF01292 Prokaryotic cytochrome b561 ISU60_RS00195 PF04216 Protein involved in formate dehydrogenase formation ISU60_RS00200 PF12390 Selenocysteine synthase N terminal ISU60_RS00200 PF03841 L-seryl-tRNA selenium transferase ISU60_RS00205 PF09107 Elongation factor SelB, winged helix ISU60_RS00205 PF00009 Elongation factor Tu GTP binding domain ISU60_RS00205 PF09106 Elongation factor SelB, winged helix ISU60_RS00205 PF03144 Elongation factor Tu domain 2 ISU60_RS00235 PF07690 Major Facilitator Superfamily ISU60_RS00250 PF01757 Acyltransferase family ISU60_RS00255 PF00419 Fimbrial protein ISU60_RS00265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS00265 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS00275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_RS00275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_RS00285 PF13407 Periplasmic binding protein domain ISU60_RS00290 PF00005 ABC transporter ISU60_RS00295 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS00300 PF12833 Helix-turn-helix domain ISU60_RS00310 PF14659 Phage integrase, N-terminal SAM-like domain ISU60_RS00310 PF13356 Arm DNA-binding domain ISU60_RS00310 PF00589 Phage integrase family ISU60_RS00320 PF04606 Ogr/Delta-like zinc finger ISU60_RS00355 PF00005 ABC transporter ISU60_RS00360 PF01032 FecCD transport family ISU60_RS00365 PF01032 FecCD transport family ISU60_RS00370 PF01497 Periplasmic binding protein ISU60_RS00385 PF00156 Phosphoribosyl transferase domain ISU60_RS00390 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_RS00395 PF17391 Urocanase N-terminal domain ISU60_RS00395 PF01175 Urocanase Rossmann-like domain ISU60_RS00395 PF17392 Urocanase C-terminal domain ISU60_RS00400 PF00221 Aromatic amino acid lyase ISU60_RS00405 PF00324 Amino acid permease ISU60_RS00410 PF12146 Serine aminopeptidase, S33 ISU60_RS00415 PF08019 Phosphoethanolamine transferase EptA/EptB ISU60_RS00415 PF00884 Sulfatase ISU60_RS00420 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS00420 PF00072 Response regulator receiver domain ISU60_RS00430 PF00665 Integrase core domain ISU60_RS00430 PF02796 Helix-turn-helix domain of resolvase ISU60_RS00435 PF01695 IstB-like ATP binding protein ISU60_RS00440 PF07730 Histidine kinase ISU60_RS00440 PF05231 MASE1 ISU60_RS00440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS00445 PF07690 Major Facilitator Superfamily ISU60_RS00455 PF05594 Haemagluttinin repeat ISU60_RS00455 PF13332 Hemagglutinin repeat ISU60_RS00455 PF05860 haemagglutination activity domain ISU60_RS00455 PF04829 Pre-toxin domain with VENN motif ISU60_RS00460 PF17287 POTRA domain ISU60_RS00460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_RS00460 PF08479 POTRA domain, ShlB-type ISU60_RS00465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_RS00470 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS00475 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_RS00475 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS00480 PF00005 ABC transporter ISU60_RS00480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_RS00485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_RS00485 PF00005 ABC transporter ISU60_RS00490 PF01270 Glycosyl hydrolases family 8 ISU60_RS00495 PF17154 Gammaproteobacterial periplasmic sensor domain ISU60_RS00495 PF00990 Diguanylate cyclase, GGDEF domain ISU60_RS00495 PF00563 EAL domain ISU60_RS00495 PF00672 HAMP domain ISU60_RS00500 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU60_RS00505 PF06917 Periplasmic pectate lyase ISU60_RS00515 PF00375 Sodium:dicarboxylate symporter family ISU60_RS00520 PF00675 Insulinase (Peptidase family M16) ISU60_RS00520 PF05193 Peptidase M16 inactive domain ISU60_RS00525 PF00294 pfkB family carbohydrate kinase ISU60_RS00530 PF01361 Tautomerase enzyme ISU60_RS00535 PF00563 EAL domain ISU60_RS00540 PF05170 AsmA family ISU60_RS00545 PF02611 CDP-diacylglycerol pyrophosphatase ISU60_RS00550 PF03631 Virulence factor BrkB ISU60_RS00575 PF02595 Glycerate kinase family ISU60_RS00580 PF02447 GntP family permease ISU60_RS00590 PF13556 PucR C-terminal helix-turn-helix domain ISU60_RS00590 PF17853 GGDEF-like domain ISU60_RS00590 PF05651 Putative sugar diacid recognition ISU60_RS00595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_RS00595 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS00600 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISU60_RS00605 PF01432 Peptidase family M3 ISU60_RS00610 PF04445 Putative SAM-dependent methyltransferase ISU60_RS00615 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ISU60_RS00615 PF00413 Matrixin ISU60_RS00615 PF08548 Peptidase M10 serralysin C terminal ISU60_RS00620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISU60_RS00620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISU60_RS00625 PF00582 Universal stress protein family ISU60_RS00630 PF10625 Universal stress protein B (UspB) ISU60_RS00640 PF01384 Phosphate transporter family ISU60_RS00650 PF13188 PAS domain ISU60_RS00650 PF00072 Response regulator receiver domain ISU60_RS00650 PF08448 PAS fold ISU60_RS00650 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS00650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS00655 PF00005 ABC transporter ISU60_RS00660 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS00665 PF13407 Periplasmic binding protein domain ISU60_RS00675 PF01116 Fructose-bisphosphate aldolase class-II ISU60_RS00685 PF00072 Response regulator receiver domain ISU60_RS00685 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS00695 PF02678 Pirin ISU60_RS00695 PF17954 Quercetinase C-terminal cupin domain ISU60_RS00700 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS00700 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_RS00705 PF02447 GntP family permease ISU60_RS00710 PF01202 Shikimate kinase ISU60_RS00725 PF01914 MarC family integral membrane protein ISU60_RS00730 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU60_RS00730 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU60_RS00760 PF11924 Inverse autotransporter, beta-domain ISU60_RS00760 PF09134 Invasin, domain 3 ISU60_RS00760 PF02369 Bacterial Ig-like domain (group 1) ISU60_RS00760 PF07979 Intimin C-type lectin domain ISU60_RS00765 PF06580 Histidine kinase ISU60_RS00765 PF07694 5TMR of 5TMR-LYT ISU60_RS00770 PF00128 Alpha amylase, catalytic domain ISU60_RS00770 PF02806 Alpha amylase, C-terminal all-beta domain ISU60_RS00770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU60_RS00775 PF00128 Alpha amylase, catalytic domain ISU60_RS00775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU60_RS00775 PF18390 Glycogen debranching enzyme C-terminal domain ISU60_RS00785 PF00534 Glycosyl transferases group 1 ISU60_RS00785 PF08323 Starch synthase catalytic domain ISU60_RS00790 PF00343 Carbohydrate phosphorylase ISU60_RS00795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISU60_RS00795 PF01266 FAD dependent oxidoreductase ISU60_RS00820 PF08220 DeoR-like helix-turn-helix domain ISU60_RS00820 PF00455 DeoR C terminal sensor domain ISU60_RS00825 PF01694 Rhomboid family ISU60_RS00825 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ISU60_RS00830 PF00581 Rhodanese-like domain ISU60_RS00835 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS00835 PF17874 MalT-like TPR region ISU60_RS00840 PF00343 Carbohydrate phosphorylase ISU60_RS00845 PF00343 Carbohydrate phosphorylase ISU60_RS00850 PF02446 4-alpha-glucanotransferase ISU60_RS00855 PF01106 NifU-like domain ISU60_RS00855 PF01521 Iron-sulphur cluster biosynthesis ISU60_RS00860 PF00156 Phosphoribosyl transferase domain ISU60_RS00865 PF00561 alpha/beta hydrolase fold ISU60_RS00870 PF07338 Protein of unknown function (DUF1471) ISU60_RS00875 PF09012 FeoC like transcriptional regulator ISU60_RS00880 PF07670 Nucleoside recognition ISU60_RS00880 PF02421 Ferrous iron transport protein B ISU60_RS00880 PF17910 FeoB cytosolic helical domain ISU60_RS00880 PF07664 Ferrous iron transport protein B C terminus ISU60_RS00885 PF04023 FeoA domain ISU60_RS00890 PF16921 Tex protein YqgF-like domain ISU60_RS00890 PF09371 Tex-like protein N-terminal domain ISU60_RS00890 PF00575 S1 RNA binding domain ISU60_RS00890 PF17674 HHH domain ISU60_RS00895 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU60_RS00895 PF03449 Transcription elongation factor, N-terminal ISU60_RS00900 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS00900 PF00072 Response regulator receiver domain ISU60_RS00905 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS00905 PF00672 HAMP domain ISU60_RS00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS00910 PF01293 Phosphoenolpyruvate carboxykinase ISU60_RS00915 PF01430 Hsp33 protein ISU60_RS00920 PF01479 S4 domain ISU60_RS00925 PF13419 Haloacid dehalogenase-like hydrolase ISU60_RS00930 PF07095 Intracellular growth attenuator protein IgaA ISU60_RS00935 PF00293 NUDIX domain ISU60_RS00940 PF17092 Penicillin-binding protein OB-like domain ISU60_RS00940 PF00912 Transglycosylase ISU60_RS00940 PF00905 Penicillin binding protein transpeptidase domain ISU60_RS00965 PF03958 Bacterial type II/III secretion system short domain ISU60_RS00965 PF00263 Bacterial type II and III secretion system protein ISU60_RS00970 PF01202 Shikimate kinase ISU60_RS00975 PF01761 3-dehydroquinate synthase ISU60_RS00980 PF05036 Sporulation related domain ISU60_RS00985 PF02086 D12 class N6 adenine-specific DNA methyltransferase ISU60_RS00990 PF00834 Ribulose-phosphate 3 epimerase family ISU60_RS00995 PF13419 Haloacid dehalogenase-like hydrolase ISU60_RS01000 PF00579 tRNA synthetases class I (W and Y) ISU60_RS01005 PF14824 Sirohaem biosynthesis protein central ISU60_RS01005 PF10414 Sirohaem synthase dimerisation region ISU60_RS01005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU60_RS01010 PF01226 Formate/nitrite transporter ISU60_RS01015 PF13806 Rieske-like [2Fe-2S] domain ISU60_RS01020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS01020 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISU60_RS01020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU60_RS01020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU60_RS01020 PF04324 BFD-like [2Fe-2S] binding domain ISU60_RS01025 PF07969 Amidohydrolase family ISU60_RS01030 PF07690 Major Facilitator Superfamily ISU60_RS01040 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS01045 PF02056 Family 4 glycosyl hydrolase ISU60_RS01045 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISU60_RS01050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU60_RS01055 PF05872 Bacterial protein of unknown function (DUF853) ISU60_RS01060 PF00117 Glutamine amidotransferase class-I ISU60_RS01065 PF00202 Aminotransferase class-III ISU60_RS01070 PF12805 FUSC-like inner membrane protein yccS ISU60_RS01075 PF00027 Cyclic nucleotide-binding domain ISU60_RS01075 PF13545 Crp-like helix-turn-helix domain ISU60_RS01080 PF02566 OsmC-like protein ISU60_RS01090 PF00485 Phosphoribulokinase / Uridine kinase family ISU60_RS01095 PF06794 Uncharacterised protein family (UPF0270) ISU60_RS01100 PF00561 alpha/beta hydrolase fold ISU60_RS01105 PF01810 LysE type translocator ISU60_RS01110 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU60_RS01115 PF00005 ABC transporter ISU60_RS01120 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS01125 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ISU60_RS01135 PF00535 Glycosyl transferase family 2 ISU60_RS01145 PF02525 Flavodoxin-like fold ISU60_RS01150 PF00999 Sodium/hydrogen exchanger family ISU60_RS01150 PF02254 TrkA-N domain ISU60_RS01155 PF09526 Probable metal-binding protein (DUF2387) ISU60_RS01160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_RS01165 PF04102 SlyX ISU60_RS01170 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU60_RS01170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_RS01175 PF08348 YheO-like PAS domain ISU60_RS01175 PF13309 HTH domain ISU60_RS01180 PF02635 DsrE/DsrF-like family ISU60_RS01185 PF02635 DsrE/DsrF-like family ISU60_RS01190 PF04077 DsrH like protein ISU60_RS01195 PF00164 Ribosomal protein S12/S23 ISU60_RS01200 PF00177 Ribosomal protein S7p/S5e ISU60_RS01205 PF03144 Elongation factor Tu domain 2 ISU60_RS01205 PF14492 Elongation Factor G, domain II ISU60_RS01205 PF00679 Elongation factor G C-terminus ISU60_RS01205 PF03764 Elongation factor G, domain IV ISU60_RS01205 PF00009 Elongation factor Tu GTP binding domain ISU60_RS01210 PF03144 Elongation factor Tu domain 2 ISU60_RS01210 PF00009 Elongation factor Tu GTP binding domain ISU60_RS01210 PF03143 Elongation factor Tu C-terminal domain ISU60_RS01215 PF01797 Transposase IS200 like ISU60_RS01220 PF02796 Helix-turn-helix domain of resolvase ISU60_RS01220 PF00665 Integrase core domain ISU60_RS01225 PF01695 IstB-like ATP binding protein ISU60_RS01230 PF04324 BFD-like [2Fe-2S] binding domain ISU60_RS01235 PF00210 Ferritin-like domain ISU60_RS01240 PF00338 Ribosomal protein S10p/S20e ISU60_RS01245 PF00297 Ribosomal protein L3 ISU60_RS01250 PF00573 Ribosomal protein L4/L1 family ISU60_RS01255 PF00276 Ribosomal protein L23 ISU60_RS01260 PF03947 Ribosomal Proteins L2, C-terminal domain ISU60_RS01260 PF00181 Ribosomal Proteins L2, RNA binding domain ISU60_RS01265 PF00203 Ribosomal protein S19 ISU60_RS01270 PF00237 Ribosomal protein L22p/L17e ISU60_RS01275 PF00189 Ribosomal protein S3, C-terminal domain ISU60_RS01275 PF07650 KH domain ISU60_RS01280 PF00252 Ribosomal protein L16p/L10e ISU60_RS01285 PF00831 Ribosomal L29 protein ISU60_RS01290 PF00366 Ribosomal protein S17 ISU60_RS01295 PF00238 Ribosomal protein L14p/L23e ISU60_RS01300 PF00467 KOW motif ISU60_RS01300 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISU60_RS01305 PF00281 Ribosomal protein L5 ISU60_RS01305 PF00673 ribosomal L5P family C-terminus ISU60_RS01310 PF00253 Ribosomal protein S14p/S29e ISU60_RS01315 PF00410 Ribosomal protein S8 ISU60_RS01320 PF00347 Ribosomal protein L6 ISU60_RS01325 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISU60_RS01330 PF00333 Ribosomal protein S5, N-terminal domain ISU60_RS01330 PF03719 Ribosomal protein S5, C-terminal domain ISU60_RS01335 PF00327 Ribosomal protein L30p/L7e ISU60_RS01340 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISU60_RS01345 PF00344 SecY translocase ISU60_RS01350 PF00444 Ribosomal protein L36 ISU60_RS01355 PF00416 Ribosomal protein S13/S18 ISU60_RS01360 PF00411 Ribosomal protein S11 ISU60_RS01365 PF01479 S4 domain ISU60_RS01365 PF00163 Ribosomal protein S4/S9 N-terminal domain ISU60_RS01370 PF01000 RNA polymerase Rpb3/RpoA insert domain ISU60_RS01370 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISU60_RS01370 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISU60_RS01375 PF01196 Ribosomal protein L17 ISU60_RS01380 PF13411 MerR HTH family regulatory protein ISU60_RS01385 PF03889 Alternative ribosome-rescue factor A ISU60_RS01390 PF01741 Large-conductance mechanosensitive channel, MscL ISU60_RS01395 PF02254 TrkA-N domain ISU60_RS01395 PF02080 TrkA-C domain ISU60_RS01400 PF01029 NusB family ISU60_RS01400 PF01189 16S rRNA methyltransferase RsmB/F ISU60_RS01405 PF00551 Formyl transferase ISU60_RS01405 PF02911 Formyl transferase, C-terminal domain ISU60_RS01410 PF01327 Polypeptide deformylase ISU60_RS01415 PF17782 DprA winged helix domain ISU60_RS01415 PF02481 DNA recombination-mediator protein A ISU60_RS01420 PF04361 Protein of unknown function (DUF494) ISU60_RS01425 PF01396 Topoisomerase DNA binding C4 zinc finger ISU60_RS01430 PF01300 Telomere recombination ISU60_RS01435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISU60_RS01435 PF08501 Shikimate dehydrogenase substrate binding domain ISU60_RS01435 PF01488 Shikimate / quinate 5-dehydrogenase ISU60_RS01440 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_RS01445 PF01695 IstB-like ATP binding protein ISU60_RS01450 PF00665 Integrase core domain ISU60_RS01450 PF02796 Helix-turn-helix domain of resolvase ISU60_RS01485 PF04204 Homoserine O-succinyltransferase ISU60_RS01490 PF01274 Malate synthase ISU60_RS01495 PF00463 Isocitrate lyase family ISU60_RS01500 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISU60_RS01515 PF13332 Hemagglutinin repeat ISU60_RS01515 PF05860 haemagglutination activity domain ISU60_RS01525 PF00696 Amino acid kinase family ISU60_RS01525 PF01842 ACT domain ISU60_RS01530 PF00342 Phosphoglucose isomerase ISU60_RS01535 PF06146 Phosphate-starvation-inducible E ISU60_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS01545 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS01545 PF14785 Maltose transport system permease protein MalF P2 domain ISU60_RS01550 PF01547 Bacterial extracellular solute-binding protein ISU60_RS01560 PF17912 MalK OB fold domain ISU60_RS01560 PF00005 ABC transporter ISU60_RS01565 PF02264 LamB porin ISU60_RS01570 PF07148 Maltose operon periplasmic protein precursor (MalM) ISU60_RS01580 PF05638 Type VI secretion system effector, Hcp ISU60_RS01590 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_RS01600 PF05947 Type VI secretion system, TssF ISU60_RS01630 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU60_RS01640 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_RS01640 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS01640 PF07724 AAA domain (Cdc48 subfamily) ISU60_RS01640 PF17871 AAA lid domain ISU60_RS01675 PF04717 Type VI secretion system, phage-baseplate injector ISU60_RS01690 PF05593 RHS Repeat ISU60_RS01690 PF03527 RHS protein ISU60_RS01720 PF04717 Type VI secretion system, phage-baseplate injector ISU60_RS01730 PF05593 RHS Repeat ISU60_RS01730 PF03527 RHS protein ISU60_RS01750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_RS01750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU60_RS01755 PF12833 Helix-turn-helix domain ISU60_RS01755 PF02311 AraC-like ligand binding domain ISU60_RS01760 PF05025 RbsD / FucU transport protein family ISU60_RS01765 PF00294 pfkB family carbohydrate kinase ISU60_RS01770 PF01791 DeoC/LacD family aldolase ISU60_RS01775 PF03358 NADPH-dependent FMN reductase ISU60_RS01780 PF09084 NMT1/THI5 like ISU60_RS01785 PF00296 Luciferase-like monooxygenase ISU60_RS01790 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS01795 PF00005 ABC transporter ISU60_RS01805 PF04221 RelB antitoxin ISU60_RS01810 PF00860 Permease family ISU60_RS01815 PF00999 Sodium/hydrogen exchanger family ISU60_RS01825 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU60_RS01835 PF00005 ABC transporter ISU60_RS01840 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS01850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_RS01850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_RS01855 PF01380 SIS domain ISU60_RS01855 PF00571 CBS domain ISU60_RS01860 PF02798 Glutathione S-transferase, N-terminal domain ISU60_RS01880 PF00313 'Cold-shock' DNA-binding domain ISU60_RS01885 PF00313 'Cold-shock' DNA-binding domain ISU60_RS01890 PF05433 Glycine zipper 2TM domain ISU60_RS01895 PF00753 Metallo-beta-lactamase superfamily ISU60_RS01900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISU60_RS01900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU60_RS01905 PF02627 Carboxymuconolactone decarboxylase family ISU60_RS01910 PF07690 Major Facilitator Superfamily ISU60_RS01935 PF02954 Bacterial regulatory protein, Fis family ISU60_RS01940 PF01207 Dihydrouridine synthase (Dus) ISU60_RS01950 PF00474 Sodium:solute symporter family ISU60_RS01955 PF06196 Protein of unknown function (DUF997) ISU60_RS01965 PF00289 Biotin carboxylase, N-terminal domain ISU60_RS01965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU60_RS01965 PF02785 Biotin carboxylase C-terminal domain ISU60_RS01970 PF00364 Biotin-requiring enzyme ISU60_RS01975 PF01220 Dehydroquinase class II ISU60_RS01980 PF01794 Ferric reductase like transmembrane component ISU60_RS01985 PF00174 Oxidoreductase molybdopterin binding domain ISU60_RS01990 PF00107 Zinc-binding dehydrogenase ISU60_RS01990 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_RS01995 PF17157 Gammaproteobacterial periplasmic sensor domain ISU60_RS01995 PF00990 Diguanylate cyclase, GGDEF domain ISU60_RS01995 PF00563 EAL domain ISU60_RS02005 PF04085 rod shape-determining protein MreC ISU60_RS02010 PF04093 rod shape-determining protein MreD ISU60_RS02015 PF02545 Maf-like protein ISU60_RS02020 PF10150 Ribonuclease E/G family ISU60_RS02020 PF00575 S1 RNA binding domain ISU60_RS02025 PF13116 Protein of unknown function ISU60_RS02025 PF13502 AsmA-like C-terminal region ISU60_RS02030 PF00795 Carbon-nitrogen hydrolase ISU60_RS02035 PF01523 Putative modulator of DNA gyrase ISU60_RS02040 PF14431 YwqJ-like deaminase ISU60_RS02040 PF18807 Tripartite Tc toxins repeat ISU60_RS02045 PF18807 Tripartite Tc toxins repeat ISU60_RS02045 PF05785 Rho-activating domain of cytotoxic necrotizing factor ISU60_RS02065 PF03534 Salmonella virulence plasmid 65kDa B protein ISU60_RS02065 PF12255 Insecticide toxin TcdB middle/C-terminal region ISU60_RS02065 PF12256 Insecticide toxin TcdB middle/N-terminal region ISU60_RS02070 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ISU60_RS02070 PF18413 Neuraminidase-like domain ISU60_RS02080 PF03466 LysR substrate binding domain ISU60_RS02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS02085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS02085 PF03466 LysR substrate binding domain ISU60_RS02090 PF07869 Protein of unknown function (DUF1656) ISU60_RS02095 PF13533 Biotin-lipoyl like ISU60_RS02100 PF04632 Fusaric acid resistance protein family ISU60_RS02115 PF01337 Barstar (barnase inhibitor) ISU60_RS02120 PF04751 Protein of unknown function (DUF615) ISU60_RS02125 PF01523 Putative modulator of DNA gyrase ISU60_RS02135 PF07361 Cytochrome b562 ISU60_RS02140 PF14760 Rnk N-terminus ISU60_RS02140 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU60_RS02145 PF00128 Alpha amylase, catalytic domain ISU60_RS02145 PF11941 Domain of unknown function (DUF3459) ISU60_RS02150 PF02378 Phosphotransferase system, EIIC ISU60_RS02150 PF00367 phosphotransferase system, EIIB ISU60_RS02155 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS02165 PF01042 Endoribonuclease L-PSP ISU60_RS02170 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ISU60_RS02170 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ISU60_RS02175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU60_RS02175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU60_RS02180 PF00381 PTS HPr component phosphorylation site ISU60_RS02185 PF03668 P-loop ATPase protein family ISU60_RS02190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_RS02200 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISU60_RS02200 PF04552 Sigma-54, DNA binding domain ISU60_RS02200 PF04963 Sigma-54 factor, core binding domain ISU60_RS02205 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU60_RS02205 PF00005 ABC transporter ISU60_RS02210 PF03968 OstA-like protein ISU60_RS02215 PF06835 Lipopolysaccharide-assembly, LptC-related ISU60_RS02225 PF01380 SIS domain ISU60_RS02225 PF00571 CBS domain ISU60_RS02230 PF01699 Sodium/calcium exchanger protein ISU60_RS02235 PF00005 ABC transporter ISU60_RS02240 PF02405 Permease MlaE ISU60_RS02245 PF02470 MlaD protein ISU60_RS02250 PF05494 MlaC protein ISU60_RS02255 PF13466 STAS domain ISU60_RS02260 PF01722 BolA-like protein ISU60_RS02265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU60_RS02270 PF13180 PDZ domain ISU60_RS02275 PF01797 Transposase IS200 like ISU60_RS02280 PF00595 PDZ domain ISU60_RS02280 PF13180 PDZ domain ISU60_RS02285 PF06295 Protein of unknown function (DUF1043) ISU60_RS02290 PF03969 AFG1-like ATPase ISU60_RS02295 PF00572 Ribosomal protein L13 ISU60_RS02300 PF00380 Ribosomal protein S9/S16 ISU60_RS02310 PF00043 Glutathione S-transferase, C-terminal domain ISU60_RS02310 PF02798 Glutathione S-transferase, N-terminal domain ISU60_RS02315 PF04386 Stringent starvation protein B ISU60_RS02325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU60_RS02325 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS02330 PF01493 GXGXG motif ISU60_RS02330 PF01645 Conserved region in glutamate synthase ISU60_RS02330 PF04898 Glutamate synthase central domain ISU60_RS02330 PF00310 Glutamine amidotransferases class-II ISU60_RS02335 PF04055 Radical SAM superfamily ISU60_RS02335 PF16199 Radical_SAM C-terminal domain ISU60_RS02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS02340 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS02340 PF18415 Histidine kinase receptor ArcB trans-membrane domain ISU60_RS02340 PF00989 PAS fold ISU60_RS02340 PF01627 Hpt domain ISU60_RS02340 PF00072 Response regulator receiver domain ISU60_RS02350 PF00912 Transglycosylase ISU60_RS02355 PF04972 BON domain ISU60_RS02360 PF13580 SIS domain ISU60_RS02365 PF02021 Uncharacterised protein family UPF0102 ISU60_RS02370 PF04348 LppC putative lipoprotein ISU60_RS02375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU60_RS02385 PF17954 Quercetinase C-terminal cupin domain ISU60_RS02385 PF02678 Pirin ISU60_RS02390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS02390 PF03466 LysR substrate binding domain ISU60_RS02400 PF01695 IstB-like ATP binding protein ISU60_RS02405 PF00665 Integrase core domain ISU60_RS02405 PF02796 Helix-turn-helix domain of resolvase ISU60_RS02415 PF03884 DNA gyrase inhibitor YacG ISU60_RS02420 PF07072 Cell division protein ISU60_RS02425 PF01121 Dephospho-CoA kinase ISU60_RS02430 PF00478 IMP dehydrogenase / GMP reductase domain ISU60_RS02435 PF00482 Type II secretion system (T2SS), protein F ISU60_RS02440 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISU60_RS02440 PF00437 Type II/IV secretion system protein ISU60_RS02445 PF07963 Prokaryotic N-terminal methylation motif ISU60_RS02450 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISU60_RS02450 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISU60_RS02455 PF01510 N-acetylmuramoyl-L-alanine amidase ISU60_RS02460 PF17113 Regulatory signalling modulator protein AmpE ISU60_RS02465 PF00324 Amino acid permease ISU60_RS02470 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS02470 PF07729 FCD domain ISU60_RS02475 PF17831 Pyruvate dehydrogenase E1 component middle domain ISU60_RS02475 PF00456 Transketolase, thiamine diphosphate binding domain ISU60_RS02480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU60_RS02480 PF00364 Biotin-requiring enzyme ISU60_RS02480 PF02817 e3 binding domain ISU60_RS02485 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS02485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_RS02490 PF01797 Transposase IS200 like ISU60_RS02495 PF11791 Aconitate B N-terminal domain ISU60_RS02495 PF06434 Aconitate hydratase 2 N-terminus ISU60_RS02495 PF00330 Aconitase family (aconitate hydratase) ISU60_RS02500 PF06062 Uncharacterised protein family (UPF0231) ISU60_RS02505 PF00892 EamA-like transporter family ISU60_RS02510 PF02675 S-adenosylmethionine decarboxylase ISU60_RS02515 PF17284 Spermidine synthase tetramerisation domain ISU60_RS02520 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ISU60_RS02525 PF00394 Multicopper oxidase ISU60_RS02525 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU60_RS02525 PF07731 Multicopper oxidase ISU60_RS02525 PF07732 Multicopper oxidase ISU60_RS02530 PF00156 Phosphoribosyl transferase domain ISU60_RS02535 PF00484 Carbonic anhydrase ISU60_RS02540 PF00005 ABC transporter ISU60_RS02545 PF01061 ABC-2 type transporter ISU60_RS02555 PF02261 Aspartate decarboxylase ISU60_RS02560 PF02569 Pantoate-beta-alanine ligase ISU60_RS02565 PF02548 Ketopantoate hydroxymethyltransferase ISU60_RS02570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISU60_RS02575 PF12626 Polymerase A arginine-rich C-terminus ISU60_RS02575 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU60_RS02575 PF01743 Poly A polymerase head domain ISU60_RS02580 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU60_RS02585 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISU60_RS02590 PF03749 Sugar fermentation stimulation protein RE domain ISU60_RS02590 PF17746 SfsA N-terminal OB domain ISU60_RS02595 PF02834 LigT like Phosphoesterase ISU60_RS02600 PF04408 Helicase associated domain (HA2) ISU60_RS02600 PF00270 DEAD/DEAH box helicase ISU60_RS02600 PF00271 Helicase conserved C-terminal domain ISU60_RS02600 PF08482 ATP-dependent helicase C-terminal ISU60_RS02605 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ISU60_RS02605 PF14814 Bifunctional transglycosylase second domain ISU60_RS02605 PF00905 Penicillin binding protein transpeptidase domain ISU60_RS02605 PF00912 Transglycosylase ISU60_RS02610 PF00005 ABC transporter ISU60_RS02615 PF01497 Periplasmic binding protein ISU60_RS02620 PF01032 FecCD transport family ISU60_RS02625 PF00202 Aminotransferase class-III ISU60_RS02630 PF00654 Voltage gated chloride channel ISU60_RS02635 PF01521 Iron-sulphur cluster biosynthesis ISU60_RS02640 PF03458 UPF0126 domain ISU60_RS02645 PF01497 Periplasmic binding protein ISU60_RS02650 PF01048 Phosphorylase superfamily ISU60_RS02655 PF01966 HD domain ISU60_RS02655 PF13286 Phosphohydrolase-associated domain ISU60_RS02660 PF00595 PDZ domain ISU60_RS02665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU60_RS02665 PF00072 Response regulator receiver domain ISU60_RS02665 PF01627 Hpt domain ISU60_RS02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS02665 PF00672 HAMP domain ISU60_RS02665 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS02675 PF01938 TRAM domain ISU60_RS02675 PF05958 tRNA (Uracil-5-)-methyltransferase ISU60_RS02680 PF13291 ACT domain ISU60_RS02680 PF04607 Region found in RelA / SpoT proteins ISU60_RS02680 PF02824 TGS domain ISU60_RS02685 PF03819 MazG nucleotide pyrophosphohydrolase domain ISU60_RS02690 PF06418 CTP synthase N-terminus ISU60_RS02690 PF00117 Glutamine amidotransferase class-I ISU60_RS02695 PF03952 Enolase, N-terminal domain ISU60_RS02695 PF00113 Enolase, C-terminal TIM barrel domain ISU60_RS02700 PF00080 Copper/zinc superoxide dismutase (SODC) ISU60_RS02705 PF04055 Radical SAM superfamily ISU60_RS02710 PF01242 6-pyruvoyl tetrahydropterin synthase ISU60_RS02715 PF00175 Oxidoreductase NAD-binding domain ISU60_RS02715 PF00667 FAD binding domain ISU60_RS02715 PF00258 Flavodoxin ISU60_RS02750 PF10414 Sirohaem synthase dimerisation region ISU60_RS02750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU60_RS02750 PF14824 Sirohaem biosynthesis protein central ISU60_RS02755 PF01507 Phosphoadenosine phosphosulfate reductase family ISU60_RS02760 PF00009 Elongation factor Tu GTP binding domain ISU60_RS02770 PF12084 Protein of unknown function (DUF3561) ISU60_RS02775 PF04977 Septum formation initiator ISU60_RS02780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU60_RS02785 PF02542 YgbB family ISU60_RS02790 PF01142 tRNA pseudouridine synthase D (TruD) ISU60_RS02795 PF01975 Survival protein SurE ISU60_RS02805 PF01476 LysM domain ISU60_RS02805 PF01551 Peptidase family M23 ISU60_RS02810 PF04545 Sigma-70, region 4 ISU60_RS02810 PF04539 Sigma-70 region 3 ISU60_RS02810 PF00140 Sigma-70 factor, region 1.2 ISU60_RS02810 PF04542 Sigma-70 region 2 ISU60_RS02815 PF05190 MutS family domain IV ISU60_RS02815 PF00488 MutS domain V ISU60_RS02815 PF05188 MutS domain II ISU60_RS02815 PF05192 MutS domain III ISU60_RS02815 PF01624 MutS domain I ISU60_RS02820 PF02502 Ribose/Galactose Isomerase ISU60_RS02825 PF00107 Zinc-binding dehydrogenase ISU60_RS02825 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_RS02835 PF02733 Dak1 domain ISU60_RS02840 PF02734 DAK2 domain ISU60_RS02845 PF13936 Helix-turn-helix domain ISU60_RS02845 PF04198 Putative sugar-binding domain ISU60_RS02850 PF02040 Arsenical pump membrane protein ISU60_RS02855 PF01022 Bacterial regulatory protein, arsR family ISU60_RS02870 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS02875 PF03150 Di-haem cytochrome c peroxidase ISU60_RS02875 PF14376 Haem-binding domain ISU60_RS02875 PF00034 Cytochrome c ISU60_RS02885 PF00593 TonB dependent receptor ISU60_RS02885 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS02895 PF00557 Metallopeptidase family M24 ISU60_RS02905 PF05683 Fumarase C-terminus ISU60_RS02905 PF05681 Fumarate hydratase (Fumerase) ISU60_RS02910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_RS02910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_RS02915 PF01261 Xylose isomerase-like TIM barrel ISU60_RS02920 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS02925 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS02930 PF00005 ABC transporter ISU60_RS02935 PF01797 Transposase IS200 like ISU60_RS02945 PF00455 DeoR C terminal sensor domain ISU60_RS02945 PF08220 DeoR-like helix-turn-helix domain ISU60_RS02950 PF00596 Class II Aldolase and Adducin N-terminal domain ISU60_RS02955 PF00384 Molybdopterin oxidoreductase ISU60_RS02955 PF01568 Molydopterin dinucleotide binding domain ISU60_RS02955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_RS02960 PF12800 4Fe-4S binding domain ISU60_RS02960 PF13247 4Fe-4S dicluster domain ISU60_RS02965 PF04976 DMSO reductase anchor subunit (DmsC) ISU60_RS02970 PF02613 Nitrate reductase delta subunit ISU60_RS02975 PF01292 Prokaryotic cytochrome b561 ISU60_RS02980 PF07361 Cytochrome b562 ISU60_RS02985 PF00141 Peroxidase ISU60_RS02990 PF13407 Periplasmic binding protein domain ISU60_RS03000 PF00005 ABC transporter ISU60_RS03005 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS03010 PF00456 Transketolase, thiamine diphosphate binding domain ISU60_RS03015 PF02779 Transketolase, pyrimidine binding domain ISU60_RS03015 PF02780 Transketolase, C-terminal domain ISU60_RS03020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_RS03020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_RS03035 PF07690 Major Facilitator Superfamily ISU60_RS03040 PF02464 Competence-damaged protein ISU60_RS03045 PF00154 recA bacterial DNA recombination protein ISU60_RS03050 PF02631 RecX family ISU60_RS03055 PF02272 DHHA1 domain ISU60_RS03055 PF01411 tRNA synthetases class II (A) ISU60_RS03055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU60_RS03060 PF02599 Global regulator protein family ISU60_RS03090 PF13419 Haloacid dehalogenase-like hydrolase ISU60_RS03095 PF09335 SNARE associated Golgi protein ISU60_RS03100 PF04262 Glutamate-cysteine ligase ISU60_RS03105 PF02664 S-Ribosylhomocysteinase (LuxS) ISU60_RS03115 PF01595 Cyclin M transmembrane N-terminal domain ISU60_RS03115 PF03471 Transporter associated domain ISU60_RS03115 PF00571 CBS domain ISU60_RS03120 PF01578 Cytochrome C assembly protein ISU60_RS03125 PF00448 SRP54-type protein, GTPase domain ISU60_RS03125 PF02881 SRP54-type protein, helical bundle domain ISU60_RS03125 PF02978 Signal peptide binding domain ISU60_RS03130 PF00886 Ribosomal protein S16 ISU60_RS03135 PF05239 PRC-barrel domain ISU60_RS03135 PF01782 RimM N-terminal domain ISU60_RS03140 PF01746 tRNA (Guanine-1)-methyltransferase ISU60_RS03145 PF01245 Ribosomal protein L19 ISU60_RS03155 PF04338 Protein of unknown function, DUF481 ISU60_RS03165 PF04397 LytTr DNA-binding domain ISU60_RS03165 PF00072 Response regulator receiver domain ISU60_RS03170 PF00793 DAHP synthetase I family ISU60_RS03175 PF01817 Chorismate mutase type II ISU60_RS03175 PF02153 Prephenate dehydrogenase ISU60_RS03185 PF01695 IstB-like ATP binding protein ISU60_RS03190 PF00665 Integrase core domain ISU60_RS03190 PF02796 Helix-turn-helix domain of resolvase ISU60_RS03200 PF01797 Transposase IS200 like ISU60_RS03205 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISU60_RS03210 PF13525 Outer membrane lipoprotein ISU60_RS03215 PF00849 RNA pseudouridylate synthase ISU60_RS03215 PF01479 S4 domain ISU60_RS03225 PF17871 AAA lid domain ISU60_RS03225 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_RS03225 PF02861 Clp amino terminal domain, pathogenicity island component ISU60_RS03225 PF07724 AAA domain (Cdc48 subfamily) ISU60_RS03225 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS03255 PF10043 Predicted periplasmic lipoprotein (DUF2279) ISU60_RS03260 PF13091 PLD-like domain ISU60_RS03265 PF13607 Succinyl-CoA ligase like flavodoxin domain ISU60_RS03265 PF00583 Acetyltransferase (GNAT) family ISU60_RS03265 PF13380 CoA binding domain ISU60_RS03270 PF03942 DTW domain ISU60_RS03275 PF00085 Thioredoxin ISU60_RS03280 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU60_RS03280 PF00588 SpoU rRNA Methylase family ISU60_RS03285 PF07690 Major Facilitator Superfamily ISU60_RS03290 PF00529 HlyD membrane-fusion protein of T1SS ISU60_RS03290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS03295 PF01047 MarR family ISU60_RS03300 PF05437 Branched-chain amino acid transport protein (AzlD) ISU60_RS03305 PF03591 AzlC protein ISU60_RS03310 PF07690 Major Facilitator Superfamily ISU60_RS03320 PF01425 Amidase ISU60_RS03335 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS03340 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS03345 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS03350 PF00005 ABC transporter ISU60_RS03355 PF00266 Aminotransferase class-V ISU60_RS03360 PF01695 IstB-like ATP binding protein ISU60_RS03365 PF02796 Helix-turn-helix domain of resolvase ISU60_RS03365 PF00665 Integrase core domain ISU60_RS03370 PF00266 Aminotransferase class-V ISU60_RS03385 PF08479 POTRA domain, ShlB-type ISU60_RS03385 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_RS03390 PF05860 haemagglutination activity domain ISU60_RS03395 PF18254 HMW1 domain 2 ISU60_RS03395 PF18071 HMW1C N-terminal ISU60_RS03405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU60_RS03405 PF09317 Domain of unknown function (DUF1974) ISU60_RS03405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISU60_RS03410 PF13580 SIS domain ISU60_RS03415 PF13230 Glutamine amidotransferases class-II ISU60_RS03420 PF03734 L,D-transpeptidase catalytic domain ISU60_RS03425 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ISU60_RS03425 PF11973 NQRA C-terminal domain ISU60_RS03430 PF03116 NQR2, RnfD, RnfE family ISU60_RS03435 PF04205 FMN-binding domain ISU60_RS03440 PF02508 Rnf-Nqr subunit, membrane protein ISU60_RS03445 PF02508 Rnf-Nqr subunit, membrane protein ISU60_RS03450 PF00175 Oxidoreductase NAD-binding domain ISU60_RS03450 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_RS03450 PF00970 Oxidoreductase FAD-binding domain ISU60_RS03455 PF02424 ApbE family ISU60_RS03465 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU60_RS03470 PF11799 impB/mucB/samB family C-terminal domain ISU60_RS03470 PF11798 IMS family HHH motif ISU60_RS03470 PF00817 impB/mucB/samB family ISU60_RS03475 PF01546 Peptidase family M20/M25/M40 ISU60_RS03475 PF07687 Peptidase dimerisation domain ISU60_RS03480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS03480 PF03466 LysR substrate binding domain ISU60_RS03495 PF00156 Phosphoribosyl transferase domain ISU60_RS03500 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ISU60_RS03505 PF07417 Sigma factor-binding transcriptional regulator Crl ISU60_RS03510 PF01472 PUA domain ISU60_RS03510 PF00696 Amino acid kinase family ISU60_RS03515 PF00171 Aldehyde dehydrogenase family ISU60_RS03520 PF07317 Flagellar regulator YcgR ISU60_RS03520 PF07238 PilZ domain ISU60_RS03530 PF08241 Methyltransferase domain ISU60_RS03540 PF01202 Shikimate kinase ISU60_RS03545 PF06865 Pyrimidine/purine nucleoside phosphorylase ISU60_RS03550 PF04381 Putative exonuclease, RdgC ISU60_RS03555 PF00480 ROK family ISU60_RS03560 PF13476 AAA domain ISU60_RS03565 PF12320 Type 5 capsule protein repressor C-terminal domain ISU60_RS03565 PF00149 Calcineurin-like phosphoesterase ISU60_RS03570 PF00072 Response regulator receiver domain ISU60_RS03570 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS03575 PF11808 Phosphate regulon sensor protein PhoR ISU60_RS03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS03575 PF00989 PAS fold ISU60_RS03575 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS03580 PF12849 PBP superfamily domain ISU60_RS03585 PF05525 Branched-chain amino acid transport protein ISU60_RS03590 PF00324 Amino acid permease ISU60_RS03595 PF00128 Alpha amylase, catalytic domain ISU60_RS03595 PF02903 Alpha amylase, N-terminal ig-like domain ISU60_RS03620 PF00578 AhpC/TSA family ISU60_RS03620 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISU60_RS03625 PF04336 Acyl carrier protein phosphodiesterase ISU60_RS03630 PF02547 Queuosine biosynthesis protein ISU60_RS03635 PF01702 Queuine tRNA-ribosyltransferase ISU60_RS03640 PF02699 Preprotein translocase subunit ISU60_RS03645 PF02355 Protein export membrane protein ISU60_RS03645 PF07549 SecD/SecF GG Motif ISU60_RS03645 PF13721 SecD export protein N-terminal TM region ISU60_RS03650 PF07549 SecD/SecF GG Motif ISU60_RS03650 PF02355 Protein export membrane protein ISU60_RS03660 PF01797 Transposase IS200 like ISU60_RS03675 PF03477 ATP cone domain ISU60_RS03680 PF01872 RibD C-terminal domain ISU60_RS03680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU60_RS03685 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISU60_RS03690 PF01029 NusB family ISU60_RS03695 PF02769 AIR synthase related protein, C-terminal domain ISU60_RS03695 PF00586 AIR synthase related protein, N-terminal domain ISU60_RS03700 PF04608 Phosphatidylglycerophosphatase A ISU60_RS03710 PF02780 Transketolase, C-terminal domain ISU60_RS03710 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISU60_RS03710 PF02779 Transketolase, pyrimidine binding domain ISU60_RS03715 PF00348 Polyprenyl synthetase ISU60_RS03720 PF02609 Exonuclease VII small subunit ISU60_RS03725 PF02926 THUMP domain ISU60_RS03725 PF02568 Thiamine biosynthesis protein (ThiI) ISU60_RS03730 PF01965 DJ-1/PfpI family ISU60_RS03735 PF02558 Ketopantoate reductase PanE/ApbA ISU60_RS03735 PF08546 Ketopantoate reductase PanE/ApbA C terminal ISU60_RS03740 PF04461 Protein of unknown function (DUF520) ISU60_RS03745 PF07690 Major Facilitator Superfamily ISU60_RS03750 PF01040 UbiA prenyltransferase family ISU60_RS03755 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISU60_RS03760 PF00510 Cytochrome c oxidase subunit III ISU60_RS03765 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISU60_RS03770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISU60_RS03770 PF06481 COX Aromatic Rich Motif ISU60_RS03775 PF03502 Nucleoside-specific channel-forming protein, Tsx ISU60_RS03780 PF07690 Major Facilitator Superfamily ISU60_RS03785 PF03923 Uncharacterized lipoprotein ISU60_RS03785 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU60_RS03790 PF01722 BolA-like protein ISU60_RS03795 PF05697 Bacterial trigger factor protein (TF) ISU60_RS03795 PF05698 Bacterial trigger factor protein (TF) C-terminus ISU60_RS03795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_RS03800 PF00574 Clp protease ISU60_RS03805 PF06689 ClpX C4-type zinc finger ISU60_RS03805 PF07724 AAA domain (Cdc48 subfamily) ISU60_RS03805 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_RS03810 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU60_RS03810 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISU60_RS03810 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS03815 PF00216 Bacterial DNA-binding protein ISU60_RS03820 PF13145 PPIC-type PPIASE domain ISU60_RS03835 PF06508 Queuosine biosynthesis protein QueC ISU60_RS03840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_RS03840 PF12793 Sugar transport-related sRNA regulator N-term ISU60_RS03850 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_RS03855 PF13404 AsnC-type helix-turn-helix domain ISU60_RS03855 PF01037 Lrp/AsnC ligand binding domain ISU60_RS03860 PF00005 ABC transporter ISU60_RS03860 PF00664 ABC transporter transmembrane region ISU60_RS03865 PF00664 ABC transporter transmembrane region ISU60_RS03865 PF00005 ABC transporter ISU60_RS03870 PF00543 Nitrogen regulatory protein P-II ISU60_RS03875 PF00909 Ammonium Transporter Family ISU60_RS03885 PF09619 Type III secretion system lipoprotein chaperone (YscW) ISU60_RS03890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU60_RS03900 PF05321 Haemolysin expression modulating protein ISU60_RS03905 PF10757 Biofilm formation regulator YbaJ ISU60_RS03915 PF00444 Ribosomal protein L36 ISU60_RS03920 PF01197 Ribosomal protein L31 ISU60_RS03925 PF00873 AcrB/AcrD/AcrF family ISU60_RS03930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS03930 PF00529 HlyD membrane-fusion protein of T1SS ISU60_RS03935 PF00440 Bacterial regulatory proteins, tetR family ISU60_RS03935 PF08361 MAATS-type transcriptional repressor, C-terminal region ISU60_RS03940 PF02635 DsrE/DsrF-like family ISU60_RS03945 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU60_RS03945 PF12795 Mechanosensitive ion channel porin domain ISU60_RS03945 PF00924 Mechanosensitive ion channel ISU60_RS03950 PF10689 Protein of unknown function (DUF2496) ISU60_RS03960 PF04304 Protein of unknown function (DUF454) ISU60_RS03965 PF00156 Phosphoribosyl transferase domain ISU60_RS03970 PF12170 DNA polymerase III tau subunit V interacting with alpha ISU60_RS03970 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISU60_RS03970 PF12169 DNA polymerase III subunits gamma and tau domain III ISU60_RS03975 PF02575 YbaB/EbfC DNA-binding family ISU60_RS03980 PF02132 RecR protein ISU60_RS03980 PF13662 Toprim domain ISU60_RS03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS03985 PF00183 Hsp90 protein ISU60_RS03990 PF05191 Adenylate kinase, active site lid ISU60_RS03995 PF00762 Ferrochelatase ISU60_RS04000 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_RS04000 PF00175 Oxidoreductase NAD-binding domain ISU60_RS04000 PF00970 Oxidoreductase FAD-binding domain ISU60_RS04005 PF00483 Nucleotidyl transferase ISU60_RS04010 PF16363 GDP-mannose 4,6 dehydratase ISU60_RS04015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU60_RS04020 PF01370 NAD dependent epimerase/dehydratase family ISU60_RS04050 PF00534 Glycosyl transferases group 1 ISU60_RS04050 PF13439 Glycosyltransferase Family 4 ISU60_RS04060 PF01370 NAD dependent epimerase/dehydratase family ISU60_RS04065 PF01050 Mannose-6-phosphate isomerase ISU60_RS04065 PF00483 Nucleotidyl transferase ISU60_RS04070 PF00535 Glycosyl transferase family 2 ISU60_RS04075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU60_RS04075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU60_RS04075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU60_RS04075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU60_RS04080 PF02706 Chain length determinant protein ISU60_RS04085 PF00294 pfkB family carbohydrate kinase ISU60_RS04090 PF02254 TrkA-N domain ISU60_RS04090 PF00999 Sodium/hydrogen exchanger family ISU60_RS04095 PF07690 Major Facilitator Superfamily ISU60_RS04110 PF04073 Aminoacyl-tRNA editing domain ISU60_RS04115 PF01963 TraB family ISU60_RS04120 PF00403 Heavy-metal-associated domain ISU60_RS04125 PF13411 MerR HTH family regulatory protein ISU60_RS04130 PF01957 NfeD-like C-terminal, partner-binding ISU60_RS04135 PF01145 SPFH domain / Band 7 family ISU60_RS04135 PF16200 C-terminal region of band_7 ISU60_RS04140 PF00085 Thioredoxin ISU60_RS04145 PF00106 short chain dehydrogenase ISU60_RS04150 PF13472 GDSL-like Lipase/Acylhydrolase family ISU60_RS04155 PF00005 ABC transporter ISU60_RS04165 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISU60_RS04165 PF02222 ATP-grasp domain ISU60_RS04170 PF00731 AIR carboxylase ISU60_RS04175 PF00149 Calcineurin-like phosphoesterase ISU60_RS04180 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU60_RS04185 PF09190 DALR domain ISU60_RS04185 PF01406 tRNA synthetases class I (C) catalytic domain ISU60_RS04190 PF01797 Transposase IS200 like ISU60_RS04200 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU60_RS04200 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU60_RS04230 PF00589 Phage integrase family ISU60_RS04240 PF01066 CDP-alcohol phosphatidyltransferase ISU60_RS04250 PF01553 Acyltransferase ISU60_RS04255 PF12147 Putative methyltransferase ISU60_RS04255 PF12146 Serine aminopeptidase, S33 ISU60_RS04260 PF00782 Dual specificity phosphatase, catalytic domain ISU60_RS04275 PF01695 IstB-like ATP binding protein ISU60_RS04280 PF02796 Helix-turn-helix domain of resolvase ISU60_RS04280 PF00665 Integrase core domain ISU60_RS04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS04285 PF03466 LysR substrate binding domain ISU60_RS04290 PF00248 Aldo/keto reductase family ISU60_RS04295 PF00248 Aldo/keto reductase family ISU60_RS04305 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU60_RS04305 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU60_RS04305 PF14310 Fibronectin type III-like domain ISU60_RS04320 PF00872 Transposase, Mutator family ISU60_RS04345 PF03212 Pertactin ISU60_RS04345 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS04345 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU60_RS04345 PF03797 Autotransporter beta-domain ISU60_RS04360 PF05638 Type VI secretion system effector, Hcp ISU60_RS04380 PF13693 Winged helix-turn-helix DNA-binding ISU60_RS04385 PF00912 Transglycosylase ISU60_RS04385 PF00905 Penicillin binding protein transpeptidase domain ISU60_RS04385 PF06832 Penicillin-Binding Protein C-terminus Family ISU60_RS04390 PF01797 Transposase IS200 like ISU60_RS04395 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISU60_RS04395 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISU60_RS04395 PF01835 MG2 domain ISU60_RS04395 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISU60_RS04395 PF07703 Alpha-2-macroglobulin bait region domain ISU60_RS04395 PF00207 Alpha-2-macroglobulin family ISU60_RS04395 PF17962 Bacterial macroglobulin domain 6 ISU60_RS04410 PF00171 Aldehyde dehydrogenase family ISU60_RS04415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_RS04415 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_RS04415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_RS04425 PF13407 Periplasmic binding protein domain ISU60_RS04430 PF00005 ABC transporter ISU60_RS04435 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS04440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU60_RS04440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_RS04445 PF00294 pfkB family carbohydrate kinase ISU60_RS04450 PF01261 Xylose isomerase-like TIM barrel ISU60_RS04455 PF04962 KduI/IolB family ISU60_RS04465 PF00005 ABC transporter ISU60_RS04465 PF00664 ABC transporter transmembrane region ISU60_RS04490 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS04495 PF00313 'Cold-shock' DNA-binding domain ISU60_RS04500 PF00313 'Cold-shock' DNA-binding domain ISU60_RS04505 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU60_RS04510 PF02416 mttA/Hcf106 family ISU60_RS04515 PF04055 Radical SAM superfamily ISU60_RS04515 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISU60_RS04520 PF03099 Biotin/lipoate A/B protein ligase family ISU60_RS04525 PF04359 Protein of unknown function (DUF493) ISU60_RS04530 PF07943 Penicillin-binding protein 5, C-terminal domain ISU60_RS04530 PF00768 D-alanyl-D-alanine carboxypeptidase ISU60_RS04535 PF03330 Lytic transglycolase ISU60_RS04535 PF05036 Sporulation related domain ISU60_RS04540 PF01098 Cell cycle protein ISU60_RS04545 PF03717 Penicillin-binding Protein dimerisation domain ISU60_RS04545 PF00905 Penicillin binding protein transpeptidase domain ISU60_RS04550 PF02590 Predicted SPOUT methyltransferase ISU60_RS04560 PF01467 Cytidylyltransferase-like ISU60_RS04565 PF06144 DNA polymerase III, delta subunit ISU60_RS04565 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ISU60_RS04570 PF04390 Lipopolysaccharide-assembly ISU60_RS04575 PF08264 Anticodon-binding domain of tRNA ISU60_RS04575 PF00133 tRNA synthetases class I (I, L, M and V) ISU60_RS04575 PF13603 Leucyl-tRNA synthetase, Domain 2 ISU60_RS04580 PF07295 Zinc-ribbon containing domain ISU60_RS04585 PF00005 ABC transporter ISU60_RS04590 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS04595 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS04600 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS04605 PF00795 Carbon-nitrogen hydrolase ISU60_RS04610 PF00571 CBS domain ISU60_RS04610 PF03471 Transporter associated domain ISU60_RS04615 PF02130 Uncharacterized protein family UPF0054 ISU60_RS04620 PF02562 PhoH-like protein ISU60_RS04625 PF04055 Radical SAM superfamily ISU60_RS04625 PF01938 TRAM domain ISU60_RS04625 PF00919 Uncharacterized protein family UPF0004 ISU60_RS04630 PF01494 FAD binding domain ISU60_RS04665 PF00733 Asparagine synthase ISU60_RS04665 PF13537 Glutamine amidotransferase domain ISU60_RS04670 PF13344 Haloacid dehalogenase-like hydrolase ISU60_RS04675 PF00480 ROK family ISU60_RS04675 PF01047 MarR family ISU60_RS04680 PF01979 Amidohydrolase family ISU60_RS04685 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISU60_RS04690 PF00367 phosphotransferase system, EIIB ISU60_RS04690 PF02378 Phosphotransferase system, EIIC ISU60_RS04690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU60_RS04695 PF01797 Transposase IS200 like ISU60_RS04700 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISU60_RS04700 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU60_RS04705 PF03573 outer membrane porin, OprD family ISU60_RS04715 PF01475 Ferric uptake regulator family ISU60_RS04720 PF00258 Flavodoxin ISU60_RS04725 PF01402 Ribbon-helix-helix protein, copG family ISU60_RS04730 PF12697 Alpha/beta hydrolase family ISU60_RS04740 PF00589 Phage integrase family ISU60_RS04740 PF13356 Arm DNA-binding domain ISU60_RS04755 PF01695 IstB-like ATP binding protein ISU60_RS04760 PF02796 Helix-turn-helix domain of resolvase ISU60_RS04760 PF00665 Integrase core domain ISU60_RS04775 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU60_RS04780 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS04785 PF00571 CBS domain ISU60_RS04785 PF00005 ABC transporter ISU60_RS04790 PF00268 Ribonucleotide reductase, small chain ISU60_RS04795 PF08343 Ribonucleotide reductase N-terminal ISU60_RS04795 PF00317 Ribonucleotide reductase, all-alpha domain ISU60_RS04795 PF02867 Ribonucleotide reductase, barrel domain ISU60_RS04810 PF06392 Acid shock protein repeat ISU60_RS04815 PF09400 Protein of unknown function (DUF2002) ISU60_RS04820 PF06711 Protein of unknown function (DUF1198) ISU60_RS04830 PF00313 'Cold-shock' DNA-binding domain ISU60_RS04835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS04845 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS04845 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_RS04850 PF00005 ABC transporter ISU60_RS04855 PF00005 ABC transporter ISU60_RS04860 PF00547 Urease, gamma subunit ISU60_RS04865 PF00699 Urease beta subunit ISU60_RS04870 PF00449 Urease alpha-subunit, N-terminal domain ISU60_RS04870 PF01979 Amidohydrolase family ISU60_RS04875 PF05194 UreE urease accessory protein, C-terminal domain ISU60_RS04875 PF02814 UreE urease accessory protein, N-terminal domain ISU60_RS04880 PF01730 UreF ISU60_RS04885 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU60_RS04895 PF03253 Urea transporter ISU60_RS04900 PF03824 High-affinity nickel-transport protein ISU60_RS04905 PF06411 HdeA/HdeB family ISU60_RS04910 PF02254 TrkA-N domain ISU60_RS04910 PF07885 Ion channel ISU60_RS04915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU60_RS04920 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU60_RS04930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_RS04935 PF02378 Phosphotransferase system, EIIC ISU60_RS04940 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ISU60_RS04945 PF07883 Cupin domain ISU60_RS04945 PF12833 Helix-turn-helix domain ISU60_RS04950 PF04794 YdjC-like protein ISU60_RS04960 PF17206 SeqA protein N-terminal domain ISU60_RS04960 PF03925 SeqA protein C-terminal domain ISU60_RS04965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU60_RS04965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU60_RS04965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU60_RS04965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU60_RS04980 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS04980 PF00072 Response regulator receiver domain ISU60_RS04985 PF13493 Domain of unknown function (DUF4118) ISU60_RS04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS04985 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS04985 PF02702 Osmosensitive K+ channel His kinase sensor domain ISU60_RS04985 PF13492 GAF domain ISU60_RS04990 PF02669 K+-transporting ATPase, c chain ISU60_RS05000 PF03814 Potassium-transporting ATPase A subunit ISU60_RS05015 PF10725 Protein of unknown function (DUF2517) ISU60_RS05020 PF08349 Protein of unknown function (DUF1722) ISU60_RS05025 PF00875 DNA photolyase ISU60_RS05025 PF03441 FAD binding domain of DNA photolyase ISU60_RS05030 PF02112 cAMP phosphodiesterases class-II ISU60_RS05035 PF01784 NIF3 (NGG1p interacting factor 3) ISU60_RS05050 PF02626 Carboxyltransferase domain, subdomain A and B ISU60_RS05055 PF03746 LamB/YcsF family ISU60_RS05070 PF01470 Pyroglutamyl peptidase ISU60_RS05075 PF03167 Uracil DNA glycosylase superfamily ISU60_RS05080 PF01228 Glycine radical ISU60_RS05090 PF12796 Ankyrin repeats (3 copies) ISU60_RS05095 PF00270 DEAD/DEAH box helicase ISU60_RS05095 PF00271 Helicase conserved C-terminal domain ISU60_RS05100 PF05175 Methyltransferase small domain ISU60_RS05105 PF00890 FAD binding domain ISU60_RS05105 PF02910 Fumarate reductase flavoprotein C-term ISU60_RS05110 PF04542 Sigma-70 region 2 ISU60_RS05110 PF08281 Sigma-70, region 4 ISU60_RS05115 PF03873 Anti sigma-E protein RseA, C-terminal domain ISU60_RS05115 PF03872 Anti sigma-E protein RseA, N-terminal domain ISU60_RS05120 PF03888 MucB/RseB N-terminal domain ISU60_RS05120 PF17188 MucB/RseB C-terminal domain ISU60_RS05135 PF00679 Elongation factor G C-terminus ISU60_RS05135 PF00009 Elongation factor Tu GTP binding domain ISU60_RS05135 PF03144 Elongation factor Tu domain 2 ISU60_RS05135 PF06421 GTP-binding protein LepA C-terminus ISU60_RS05140 PF10502 Signal peptidase, peptidase S26 ISU60_RS05145 PF14622 Ribonuclease-III-like ISU60_RS05145 PF00035 Double-stranded RNA binding motif ISU60_RS05150 PF01926 50S ribosome-binding GTPase ISU60_RS05150 PF07650 KH domain ISU60_RS05155 PF11967 Recombination protein O N terminal ISU60_RS05155 PF02565 Recombination protein O C terminal ISU60_RS05160 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISU60_RS05165 PF01648 4'-phosphopantetheinyl transferase superfamily ISU60_RS05170 PF01797 Transposase IS200 like ISU60_RS05175 PF12838 4Fe-4S dicluster domain ISU60_RS05180 PF01380 SIS domain ISU60_RS05180 PF01418 Helix-turn-helix domain, rpiR family ISU60_RS05185 PF01380 SIS domain ISU60_RS05195 PF14437 MafB19-like deaminase ISU60_RS05200 PF01464 Transglycosylase SLT domain ISU60_RS05200 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS05205 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISU60_RS05205 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISU60_RS05205 PF02769 AIR synthase related protein, C-terminal domain ISU60_RS05225 PF01695 IstB-like ATP binding protein ISU60_RS05230 PF02796 Helix-turn-helix domain of resolvase ISU60_RS05230 PF00665 Integrase core domain ISU60_RS05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS05245 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS05250 PF13942 YfhG lipoprotein ISU60_RS05255 PF00158 Sigma-54 interaction domain ISU60_RS05255 PF00072 Response regulator receiver domain ISU60_RS05260 PF00795 Carbon-nitrogen hydrolase ISU60_RS05260 PF02540 NAD synthase ISU60_RS05265 PF00543 Nitrogen regulatory protein P-II ISU60_RS05270 PF14503 YhfZ C-terminal domain ISU60_RS05270 PF14502 Helix-turn-helix domain ISU60_RS05275 PF00175 Oxidoreductase NAD-binding domain ISU60_RS05275 PF00970 Oxidoreductase FAD-binding domain ISU60_RS05275 PF00042 Globin ISU60_RS05280 PF00464 Serine hydroxymethyltransferase ISU60_RS05290 PF13505 Outer membrane protein beta-barrel domain ISU60_RS05295 PF12832 MFS_1 like family ISU60_RS05300 PF00874 PRD domain ISU60_RS05305 PF06226 Protein of unknown function (DUF1007) ISU60_RS05310 PF03824 High-affinity nickel-transport protein ISU60_RS05315 PF00459 Inositol monophosphatase family ISU60_RS05320 PF00588 SpoU rRNA Methylase family ISU60_RS05325 PF02082 Transcriptional regulator ISU60_RS05330 PF00266 Aminotransferase class-V ISU60_RS05335 PF01592 NifU-like N terminal domain ISU60_RS05340 PF01521 Iron-sulphur cluster biosynthesis ISU60_RS05345 PF07743 HSCB C-terminal oligomerisation domain ISU60_RS05345 PF00226 DnaJ domain ISU60_RS05350 PF00012 Hsp70 protein ISU60_RS05355 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_RS05360 PF04384 Iron-sulphur cluster assembly ISU60_RS05365 PF00883 Cytosol aminopeptidase family, catalytic domain ISU60_RS05365 PF12404 Peptidase ISU60_RS05370 PF07179 SseB protein N-terminal domain ISU60_RS05370 PF14581 SseB protein C-terminal domain ISU60_RS05385 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU60_RS05385 PF03797 Autotransporter beta-domain ISU60_RS05385 PF03212 Pertactin ISU60_RS05390 PF03797 Autotransporter beta-domain ISU60_RS05390 PF03212 Pertactin ISU60_RS05390 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU60_RS05400 PF00334 Nucleoside diphosphate kinase ISU60_RS05405 PF04055 Radical SAM superfamily ISU60_RS05415 PF13464 Domain of unknown function (DUF4115) ISU60_RS05420 PF04551 GcpE protein ISU60_RS05425 PF03129 Anticodon binding domain ISU60_RS05425 PF13393 Histidyl-tRNA synthetase ISU60_RS05430 PF09976 Tetratricopeptide repeat-like domain ISU60_RS05435 PF13360 PQQ-like domain ISU60_RS05440 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISU60_RS05440 PF01926 50S ribosome-binding GTPase ISU60_RS05450 PF07191 zinc-ribbons ISU60_RS05455 PF02601 Exonuclease VII, large subunit ISU60_RS05455 PF13742 OB-fold nucleic acid binding domain ISU60_RS05460 PF00478 IMP dehydrogenase / GMP reductase domain ISU60_RS05460 PF00571 CBS domain ISU60_RS05465 PF00117 Glutamine amidotransferase class-I ISU60_RS05465 PF02540 NAD synthase ISU60_RS05465 PF00958 GMP synthase C terminal domain ISU60_RS05470 PF01797 Transposase IS200 like ISU60_RS05475 PF05638 Type VI secretion system effector, Hcp ISU60_RS05505 PF00872 Transposase, Mutator family ISU60_RS05520 PF08543 Phosphomethylpyrimidine kinase ISU60_RS05540 PF00781 Diacylglycerol kinase catalytic domain ISU60_RS05545 PF16325 Peptidase family U32 C-terminal domain ISU60_RS05545 PF01136 Peptidase family U32 ISU60_RS05550 PF07411 Domain of unknown function (DUF1508) ISU60_RS05555 PF00072 Response regulator receiver domain ISU60_RS05555 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS05565 PF07690 Major Facilitator Superfamily ISU60_RS05570 PF00873 AcrB/AcrD/AcrF family ISU60_RS05575 PF00873 AcrB/AcrD/AcrF family ISU60_RS05580 PF13533 Biotin-lipoyl like ISU60_RS05585 PF00005 ABC transporter ISU60_RS05585 PF08402 TOBE domain ISU60_RS05590 PF00155 Aminotransferase class I and II ISU60_RS05590 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS05595 PF00202 Aminotransferase class-III ISU60_RS05605 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS05610 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS05615 PF00012 Hsp70 protein ISU60_RS05620 PF03448 MgtE intracellular N domain ISU60_RS05620 PF00571 CBS domain ISU60_RS05620 PF01769 Divalent cation transporter ISU60_RS05630 PF02541 Ppx/GppA phosphatase family ISU60_RS05635 PF02503 Polyphosphate kinase middle domain ISU60_RS05635 PF13090 Polyphosphate kinase C-terminal domain 2 ISU60_RS05635 PF17941 Polyphosphate kinase C-terminal domain 1 ISU60_RS05635 PF13089 Polyphosphate kinase N-terminal domain ISU60_RS05640 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS05645 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS05650 PF00005 ABC transporter ISU60_RS05660 PF13302 Acetyltransferase (GNAT) domain ISU60_RS05665 PF00551 Formyl transferase ISU60_RS05670 PF00586 AIR synthase related protein, N-terminal domain ISU60_RS05670 PF02769 AIR synthase related protein, C-terminal domain ISU60_RS05680 PF01797 Transposase IS200 like ISU60_RS05685 PF00308 Bacterial dnaA protein ISU60_RS05690 PF03960 ArsC family ISU60_RS05695 PF07720 Tetratricopeptide repeat ISU60_RS05695 PF01435 Peptidase family M48 ISU60_RS05700 PF01594 AI-2E family transporter ISU60_RS05710 PF00578 AhpC/TSA family ISU60_RS05715 PF01842 ACT domain ISU60_RS05720 PF00701 Dihydrodipicolinate synthetase family ISU60_RS05725 PF06804 NlpB/DapX lipoprotein ISU60_RS05730 PF01797 Transposase IS200 like ISU60_RS05735 PF01259 SAICAR synthetase ISU60_RS05740 PF04228 Putative neutral zinc metallopeptidase ISU60_RS05745 PF04284 Protein of unknown function (DUF441) ISU60_RS05750 PF17176 tRNA-binding domain ISU60_RS05750 PF05127 Helicase ISU60_RS05750 PF08351 Domain of unknown function (DUF1726) ISU60_RS05750 PF13718 GNAT acetyltransferase 2 ISU60_RS05755 PF13980 Uncharacterised protein family (UPF0370) ISU60_RS05760 PF02557 D-alanyl-D-alanine carboxypeptidase ISU60_RS05765 PF07687 Peptidase dimerisation domain ISU60_RS05765 PF01546 Peptidase family M20/M25/M40 ISU60_RS05770 PF03960 ArsC family ISU60_RS05785 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS05790 PF08402 TOBE domain ISU60_RS05790 PF00005 ABC transporter ISU60_RS05800 PF00884 Sulfatase ISU60_RS05805 PF13186 Iron-sulfur cluster-binding domain ISU60_RS05805 PF04055 Radical SAM superfamily ISU60_RS05810 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU60_RS05820 PF00873 AcrB/AcrD/AcrF family ISU60_RS05830 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS05830 PF00072 Response regulator receiver domain ISU60_RS05835 PF12800 4Fe-4S binding domain ISU60_RS05835 PF00037 4Fe-4S binding domain ISU60_RS05835 PF13187 4Fe-4S dicluster domain ISU60_RS05840 PF03927 NapD protein ISU60_RS05845 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU60_RS05845 PF00384 Molybdopterin oxidoreductase ISU60_RS05845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_RS05845 PF01568 Molydopterin dinucleotide binding domain ISU60_RS05850 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ISU60_RS05855 PF03264 NapC/NirT cytochrome c family, N-terminal region ISU60_RS05860 PF00293 NUDIX domain ISU60_RS05865 PF01515 Phosphate acetyl/butaryl transferase ISU60_RS05865 PF00390 Malic enzyme, N-terminal domain ISU60_RS05865 PF03949 Malic enzyme, NAD binding domain ISU60_RS05870 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ISU60_RS05875 PF01218 Coproporphyrinogen III oxidase ISU60_RS05880 PF00583 Acetyltransferase (GNAT) family ISU60_RS05890 PF03797 Autotransporter beta-domain ISU60_RS05890 PF03212 Pertactin ISU60_RS05890 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS05890 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU60_RS05895 PF04076 Bacterial OB fold (BOF) protein ISU60_RS05900 PF06572 Protein of unknown function (DUF1131) ISU60_RS05905 PF04261 Dyp-type peroxidase family ISU60_RS05910 PF00701 Dihydrodipicolinate synthetase family ISU60_RS05915 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ISU60_RS05920 PF12468 Type III secretion system leucine rich repeat protein ISU60_RS05925 PF00480 ROK family ISU60_RS05930 PF04074 YhcH/YjgK/YiaL ISU60_RS05935 PF01418 Helix-turn-helix domain, rpiR family ISU60_RS05935 PF01380 SIS domain ISU60_RS05940 PF07690 Major Facilitator Superfamily ISU60_RS05950 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS05955 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS05960 PF00005 ABC transporter ISU60_RS05975 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS05975 PF00072 Response regulator receiver domain ISU60_RS05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS05980 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS05980 PF00672 HAMP domain ISU60_RS05990 PF00155 Aminotransferase class I and II ISU60_RS06000 PF00557 Metallopeptidase family M24 ISU60_RS06010 PF00474 Sodium:solute symporter family ISU60_RS06015 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS06015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_RS06020 PF00005 ABC transporter ISU60_RS06020 PF02687 FtsX-like permease family ISU60_RS06020 PF12704 MacB-like periplasmic core domain ISU60_RS06025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS06030 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS06030 PF00072 Response regulator receiver domain ISU60_RS06035 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS06035 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU60_RS06035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS06035 PF00672 HAMP domain ISU60_RS06045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU60_RS06050 PF00391 PEP-utilising enzyme, mobile domain ISU60_RS06050 PF02896 PEP-utilising enzyme, TIM barrel domain ISU60_RS06050 PF05524 PEP-utilising enzyme, N-terminal ISU60_RS06055 PF00381 PTS HPr component phosphorylation site ISU60_RS06060 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_RS06070 PF04354 ZipA, C-terminal FtsZ-binding domain ISU60_RS06075 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISU60_RS06075 PF00533 BRCA1 C Terminus (BRCT) domain ISU60_RS06075 PF12826 Helix-hairpin-helix motif ISU60_RS06075 PF01653 NAD-dependent DNA ligase adenylation domain ISU60_RS06075 PF03120 NAD-dependent DNA ligase OB-fold domain ISU60_RS06080 PF12843 Putative quorum-sensing-regulated virulence factor ISU60_RS06105 PF01797 Transposase IS200 like ISU60_RS06110 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU60_RS06145 PF07662 Na+ dependent nucleoside transporter C-terminus ISU60_RS06145 PF01773 Na+ dependent nucleoside transporter N-terminus ISU60_RS06145 PF07670 Nucleoside recognition ISU60_RS06150 PF01566 Natural resistance-associated macrophage protein ISU60_RS06160 PF00248 Aldo/keto reductase family ISU60_RS06165 PF03466 LysR substrate binding domain ISU60_RS06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS06175 PF02685 Glucokinase ISU60_RS06180 PF07350 Protein of unknown function (DUF1479) ISU60_RS06185 PF00155 Aminotransferase class I and II ISU60_RS06190 PF01292 Prokaryotic cytochrome b561 ISU60_RS06200 PF03783 Curli production assembly/transport component CsgG ISU60_RS06210 PF05643 Putative bacterial lipoprotein (DUF799) ISU60_RS06220 PF02613 Nitrate reductase delta subunit ISU60_RS06225 PF04976 DMSO reductase anchor subunit (DmsC) ISU60_RS06230 PF12800 4Fe-4S binding domain ISU60_RS06230 PF13247 4Fe-4S dicluster domain ISU60_RS06235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_RS06235 PF01568 Molydopterin dinucleotide binding domain ISU60_RS06235 PF00384 Molybdopterin oxidoreductase ISU60_RS06245 PF05638 Type VI secretion system effector, Hcp ISU60_RS06255 PF00005 ABC transporter ISU60_RS06260 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS06270 PF13406 Transglycosylase SLT domain ISU60_RS06315 PF05947 Type VI secretion system, TssF ISU60_RS06320 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS06320 PF17871 AAA lid domain ISU60_RS06320 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_RS06320 PF07724 AAA domain (Cdc48 subfamily) ISU60_RS06325 PF16970 Type-1 fimbrial protein, A ISU60_RS06330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS06330 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS06335 PF13953 PapC C-terminal domain ISU60_RS06335 PF13954 PapC N-terminal domain ISU60_RS06335 PF00577 Outer membrane usher protein ISU60_RS06340 PF00872 Transposase, Mutator family ISU60_RS06345 PF00577 Outer membrane usher protein ISU60_RS06345 PF13954 PapC N-terminal domain ISU60_RS06345 PF13953 PapC C-terminal domain ISU60_RS06355 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU60_RS06360 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_RS06375 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU60_RS06385 PF02796 Helix-turn-helix domain of resolvase ISU60_RS06385 PF00665 Integrase core domain ISU60_RS06390 PF01695 IstB-like ATP binding protein ISU60_RS06400 PF14331 ImcF-related N-terminal domain ISU60_RS06400 PF06744 Type VI secretion protein IcmF C-terminal ISU60_RS06400 PF06761 Intracellular multiplication and human macrophage-killing ISU60_RS06405 PF04717 Type VI secretion system, phage-baseplate injector ISU60_RS06420 PF07024 ImpE protein ISU60_RS06435 PF08274 PhnA Zinc-Ribbon ISU60_RS06435 PF03831 PhnA domain ISU60_RS06445 PF04011 LemA family ISU60_RS06460 PF00005 ABC transporter ISU60_RS06465 PF03379 CcmB protein ISU60_RS06470 PF01578 Cytochrome C assembly protein ISU60_RS06475 PF04995 Heme exporter protein D (CcmD) ISU60_RS06480 PF03100 CcmE ISU60_RS06485 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISU60_RS06485 PF01578 Cytochrome C assembly protein ISU60_RS06490 PF08534 Redoxin ISU60_RS06495 PF03918 Cytochrome C biogenesis protein ISU60_RS06500 PF03918 Cytochrome C biogenesis protein ISU60_RS06505 PF04333 MlaA lipoprotein ISU60_RS06510 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU60_RS06515 PF04175 Protein of unknown function (DUF406) ISU60_RS06520 PF02803 Thiolase, C-terminal domain ISU60_RS06520 PF00108 Thiolase, N-terminal domain ISU60_RS06525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU60_RS06525 PF00378 Enoyl-CoA hydratase/isomerase ISU60_RS06525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU60_RS06530 PF00300 Histidine phosphatase superfamily (branch 1) ISU60_RS06540 PF01713 Smr domain ISU60_RS06545 PF05175 Methyltransferase small domain ISU60_RS06550 PF01264 Chorismate synthase ISU60_RS06555 PF03411 Penicillin-insensitive murein endopeptidase ISU60_RS06560 PF01925 Sulfite exporter TauE/SafE ISU60_RS06565 PF04315 Elongation factor P hydroxylase ISU60_RS06570 PF08891 YfcL protein ISU60_RS06575 PF01266 FAD dependent oxidoreductase ISU60_RS06575 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISU60_RS06580 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_RS06580 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_RS06585 PF01177 Asp/Glu/Hydantoin racemase ISU60_RS06590 PF00419 Fimbrial protein ISU60_RS06600 PF00892 EamA-like transporter family ISU60_RS06610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_RS06610 PF11890 Domain of unknown function (DUF3410) ISU60_RS06610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_RS06615 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU60_RS06615 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU60_RS06620 PF01416 tRNA pseudouridine synthase ISU60_RS06625 PF09335 SNARE associated Golgi protein ISU60_RS06630 PF01039 Carboxyl transferase domain ISU60_RS06630 PF17848 Acetyl-coA carboxylase zinc finger domain ISU60_RS06635 PF02875 Mur ligase family, glutamate ligase domain ISU60_RS06635 PF08245 Mur ligase middle domain ISU60_RS06640 PF05036 Sporulation related domain ISU60_RS06645 PF02674 Colicin V production protein ISU60_RS06650 PF00156 Phosphoribosyl transferase domain ISU60_RS06655 PF02441 Flavoprotein ISU60_RS06660 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS06665 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS06675 PF00005 ABC transporter ISU60_RS06680 PF01370 NAD dependent epimerase/dehydratase family ISU60_RS06680 PF08338 Domain of unknown function (DUF1731) ISU60_RS06690 PF12850 Calcineurin-like phosphoesterase superfamily domain ISU60_RS06695 PF00293 NUDIX domain ISU60_RS06710 PF00872 Transposase, Mutator family ISU60_RS06720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_RS06725 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS06725 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_RS06730 PF01515 Phosphate acetyl/butaryl transferase ISU60_RS06730 PF07085 DRTGG domain ISU60_RS06735 PF00871 Acetokinase family ISU60_RS06740 PF04217 Protein of unknown function, DUF412 ISU60_RS06745 PF03887 YfbU domain ISU60_RS06750 PF13419 Haloacid dehalogenase-like hydrolase ISU60_RS06755 PF03600 Citrate transporter ISU60_RS06755 PF02080 TrkA-C domain ISU60_RS06765 PF00155 Aminotransferase class I and II ISU60_RS06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS06770 PF03466 LysR substrate binding domain ISU60_RS06775 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISU60_RS06780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISU60_RS06785 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISU60_RS06785 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISU60_RS06795 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISU60_RS06795 PF10531 SLBB domain ISU60_RS06795 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU60_RS06800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_RS06800 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISU60_RS06800 PF01568 Molydopterin dinucleotide binding domain ISU60_RS06800 PF00384 Molybdopterin oxidoreductase ISU60_RS06805 PF00146 NADH dehydrogenase ISU60_RS06810 PF12838 4Fe-4S dicluster domain ISU60_RS06815 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISU60_RS06820 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISU60_RS06825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISU60_RS06825 PF00361 Proton-conducting membrane transporter ISU60_RS06830 PF00361 Proton-conducting membrane transporter ISU60_RS06835 PF00361 Proton-conducting membrane transporter ISU60_RS06845 PF04074 YhcH/YjgK/YiaL ISU60_RS06850 PF01202 Shikimate kinase ISU60_RS06855 PF00106 short chain dehydrogenase ISU60_RS06860 PF02638 Glycosyl hydrolase-like 10 ISU60_RS06865 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS06870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_RS06870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_RS06875 PF07690 Major Facilitator Superfamily ISU60_RS06880 PF03928 Haem-degrading ISU60_RS06885 PF00920 Dehydratase family ISU60_RS06890 PF05957 Bacterial protein of unknown function (DUF883) ISU60_RS06900 PF00425 chorismate binding enzyme ISU60_RS06905 PF16582 Middle domain of thiamine pyrophosphate ISU60_RS06905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_RS06905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_RS06910 PF12697 Alpha/beta hydrolase family ISU60_RS06915 PF00378 Enoyl-CoA hydratase/isomerase ISU60_RS06920 PF13378 Enolase C-terminal domain-like ISU60_RS06930 PF02885 Glycosyl transferase family, helical bundle domain ISU60_RS06935 PF07338 Protein of unknown function (DUF1471) ISU60_RS06940 PF05971 RNA methyltransferase ISU60_RS06950 PF01695 IstB-like ATP binding protein ISU60_RS06955 PF02796 Helix-turn-helix domain of resolvase ISU60_RS06955 PF00665 Integrase core domain ISU60_RS06960 PF13426 PAS domain ISU60_RS06960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_RS06960 PF08447 PAS fold ISU60_RS06965 PF00005 ABC transporter ISU60_RS06970 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS06975 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS06985 PF00210 Ferritin-like domain ISU60_RS06990 PF13649 Methyltransferase domain ISU60_RS07000 PF00892 EamA-like transporter family ISU60_RS07005 PF13505 Outer membrane protein beta-barrel domain ISU60_RS07025 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_RS07025 PF00107 Zinc-binding dehydrogenase ISU60_RS07030 PF13407 Periplasmic binding protein domain ISU60_RS07035 PF00005 ABC transporter ISU60_RS07040 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS07045 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS07050 PF03466 LysR substrate binding domain ISU60_RS07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS07055 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU60_RS07065 PF02028 BCCT, betaine/carnitine/choline family transporter ISU60_RS07070 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ISU60_RS07070 PF00355 Rieske [2Fe-2S] domain ISU60_RS07075 PF00175 Oxidoreductase NAD-binding domain ISU60_RS07075 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_RS07075 PF00970 Oxidoreductase FAD-binding domain ISU60_RS07080 PF08479 POTRA domain, ShlB-type ISU60_RS07080 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_RS07080 PF17287 POTRA domain ISU60_RS07085 PF05860 haemagglutination activity domain ISU60_RS07085 PF04829 Pre-toxin domain with VENN motif ISU60_RS07085 PF13332 Hemagglutinin repeat ISU60_RS07085 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS07125 PF15526 Novel toxin 21 ISU60_RS07125 PF05860 haemagglutination activity domain ISU60_RS07125 PF13332 Hemagglutinin repeat ISU60_RS07125 PF05594 Haemagluttinin repeat ISU60_RS07125 PF04829 Pre-toxin domain with VENN motif ISU60_RS07135 PF00005 ABC transporter ISU60_RS07135 PF17912 MalK OB fold domain ISU60_RS07140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU60_RS07140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU60_RS07140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU60_RS07140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU60_RS07145 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS07155 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS07160 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS07165 PF04041 beta-1,4-mannooligosaccharide phosphorylase ISU60_RS07185 PF00924 Mechanosensitive ion channel ISU60_RS07190 PF01867 CRISPR associated protein Cas1 ISU60_RS07200 PF09611 CRISPR-associated protein (Cas_Csy1) ISU60_RS07205 PF09614 CRISPR-associated protein (Cas_Csy2) ISU60_RS07210 PF09615 CRISPR-associated protein (Cas_Csy3) ISU60_RS07215 PF09618 CRISPR-associated protein (Cas_Csy4) ISU60_RS07220 PF00248 Aldo/keto reductase family ISU60_RS07230 PF00083 Sugar (and other) transporter ISU60_RS07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS07240 PF03466 LysR substrate binding domain ISU60_RS07245 PF03472 Autoinducer binding domain ISU60_RS07245 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS07250 PF00765 Autoinducer synthase ISU60_RS07265 PF00581 Rhodanese-like domain ISU60_RS07265 PF12368 Rhodanase C-terminal ISU60_RS07265 PF17773 UPF0176 acylphosphatase like domain ISU60_RS07270 PF01594 AI-2E family transporter ISU60_RS07280 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS07285 PF01266 FAD dependent oxidoreductase ISU60_RS07290 PF00872 Transposase, Mutator family ISU60_RS07295 PF13991 BssS protein family ISU60_RS07300 PF06183 DinI-like family ISU60_RS07305 PF01979 Amidohydrolase family ISU60_RS07310 PF03992 Antibiotic biosynthesis monooxygenase ISU60_RS07320 PF00872 Transposase, Mutator family ISU60_RS07325 PF10150 Ribonuclease E/G family ISU60_RS07325 PF00575 S1 RNA binding domain ISU60_RS07325 PF12111 Polyribonucleotide phosphorylase C terminal ISU60_RS07330 PF01479 S4 domain ISU60_RS07330 PF00849 RNA pseudouridylate synthase ISU60_RS07335 PF02545 Maf-like protein ISU60_RS07340 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISU60_RS07345 PF01783 Ribosomal L32p protein family ISU60_RS07350 PF02504 Fatty acid synthesis protein ISU60_RS07355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU60_RS07355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU60_RS07360 PF00698 Acyl transferase domain ISU60_RS07370 PF00550 Phosphopantetheine attachment site ISU60_RS07375 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_RS07375 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_RS07385 PF01063 Amino-transferase class IV ISU60_RS07390 PF02618 YceG-like family ISU60_RS07395 PF02223 Thymidylate kinase ISU60_RS07400 PF09115 DNA polymerase III, delta subunit, C terminal ISU60_RS07405 PF01026 TatD related DNase ISU60_RS07410 PF02378 Phosphotransferase system, EIIC ISU60_RS07410 PF00367 phosphotransferase system, EIIB ISU60_RS07420 PF08501 Shikimate dehydrogenase substrate binding domain ISU60_RS07425 PF01230 HIT domain ISU60_RS07430 PF07233 Protein of unknown function (DUF1425) ISU60_RS07435 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU60_RS07435 PF13036 Peptidoglycan-synthase activator LpoB ISU60_RS07440 PF01636 Phosphotransferase enzyme family ISU60_RS07445 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU60_RS07450 PF05728 Uncharacterised protein family (UPF0227) ISU60_RS07455 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS07470 PF00872 Transposase, Mutator family ISU60_RS07475 PF05433 Glycine zipper 2TM domain ISU60_RS07480 PF03461 TRCF domain ISU60_RS07480 PF17757 UvrB interaction domain ISU60_RS07480 PF02559 CarD-like/TRCF domain ISU60_RS07480 PF00271 Helicase conserved C-terminal domain ISU60_RS07480 PF00270 DEAD/DEAH box helicase ISU60_RS07485 PF12704 MacB-like periplasmic core domain ISU60_RS07485 PF02687 FtsX-like permease family ISU60_RS07490 PF00005 ABC transporter ISU60_RS07495 PF12704 MacB-like periplasmic core domain ISU60_RS07495 PF02687 FtsX-like permease family ISU60_RS07500 PF00480 ROK family ISU60_RS07505 PF00480 ROK family ISU60_RS07510 PF02146 Sir2 family ISU60_RS07515 PF01546 Peptidase family M20/M25/M40 ISU60_RS07515 PF07687 Peptidase dimerisation domain ISU60_RS07520 PF08007 Cupin superfamily protein ISU60_RS07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS07525 PF08918 PhoQ Sensor ISU60_RS07530 PF00072 Response regulator receiver domain ISU60_RS07530 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS07540 PF00206 Lyase ISU60_RS07540 PF08328 Adenylosuccinate lyase C-terminal ISU60_RS07545 PF04356 Protein of unknown function (DUF489) ISU60_RS07555 PF00293 NUDIX domain ISU60_RS07560 PF00849 RNA pseudouridylate synthase ISU60_RS07565 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU60_RS07570 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS07570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_RS07580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_RS07580 PF08447 PAS fold ISU60_RS07585 PF05368 NmrA-like family ISU60_RS07590 PF01638 HxlR-like helix-turn-helix ISU60_RS07600 PF00328 Histidine phosphatase superfamily (branch 2) ISU60_RS07605 PF14001 YdfZ protein ISU60_RS07615 PF01037 Lrp/AsnC ligand binding domain ISU60_RS07615 PF13404 AsnC-type helix-turn-helix domain ISU60_RS07625 PF10777 Inner membrane protein YlaC ISU60_RS07630 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_RS07630 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_RS07630 PF16197 Ketoacyl-synthetase C-terminal extension ISU60_RS07630 PF00698 Acyl transferase domain ISU60_RS07630 PF08659 KR domain ISU60_RS07630 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_RS07630 PF00550 Phosphopantetheine attachment site ISU60_RS07630 PF14765 Polyketide synthase dehydratase ISU60_RS07630 PF00107 Zinc-binding dehydrogenase ISU60_RS07635 PF02929 Beta galactosidase small chain ISU60_RS07635 PF00703 Glycosyl hydrolases family 2 ISU60_RS07635 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISU60_RS07635 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISU60_RS07635 PF16353 Domain of unknown function(DUF4981) ISU60_RS07640 PF00313 'Cold-shock' DNA-binding domain ISU60_RS07645 PF10781 Dextransucrase DSRB ISU60_RS07655 PF02308 MgtC family ISU60_RS07660 PF00689 Cation transporting ATPase, C-terminus ISU60_RS07660 PF00690 Cation transporter/ATPase, N-terminus ISU60_RS07670 PF05280 Flagellar transcriptional activator (FlhC) ISU60_RS07675 PF01618 MotA/TolQ/ExbB proton channel family ISU60_RS07680 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU60_RS07680 PF00691 OmpA family ISU60_RS07685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS07685 PF02895 Signal transducing histidine kinase, homodimeric domain ISU60_RS07685 PF01584 CheW-like domain ISU60_RS07685 PF09078 CheY binding ISU60_RS07685 PF01627 Hpt domain ISU60_RS07690 PF01584 CheW-like domain ISU60_RS07695 PF07690 Major Facilitator Superfamily ISU60_RS07700 PF01042 Endoribonuclease L-PSP ISU60_RS07710 PF08348 YheO-like PAS domain ISU60_RS07710 PF13309 HTH domain ISU60_RS07715 PF12951 Passenger-associated-transport-repeat ISU60_RS07730 PF02203 Tar ligand binding domain homologue ISU60_RS07730 PF00672 HAMP domain ISU60_RS07730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_RS07735 PF02203 Tar ligand binding domain homologue ISU60_RS07735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_RS07735 PF00672 HAMP domain ISU60_RS07740 PF03705 CheR methyltransferase, all-alpha domain ISU60_RS07740 PF01739 CheR methyltransferase, SAM binding domain ISU60_RS07745 PF00072 Response regulator receiver domain ISU60_RS07745 PF01339 CheB methylesterase ISU60_RS07750 PF00072 Response regulator receiver domain ISU60_RS07755 PF04344 Chemotaxis phosphatase, CheZ ISU60_RS07760 PF01510 N-acetylmuramoyl-L-alanine amidase ISU60_RS07765 PF03895 YadA-like membrane anchor domain ISU60_RS07765 PF05658 Head domain of trimeric autotransporter adhesin ISU60_RS07765 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS07765 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU60_RS07770 PF03895 YadA-like membrane anchor domain ISU60_RS07770 PF05658 Head domain of trimeric autotransporter adhesin ISU60_RS07770 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU60_RS07770 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS07780 PF01168 Alanine racemase, N-terminal domain ISU60_RS07780 PF00842 Alanine racemase, C-terminal domain ISU60_RS07805 PF01695 IstB-like ATP binding protein ISU60_RS07810 PF00665 Integrase core domain ISU60_RS07810 PF02796 Helix-turn-helix domain of resolvase ISU60_RS07820 PF07351 Protein of unknown function (DUF1480) ISU60_RS07835 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS07835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS07855 PF02470 MlaD protein ISU60_RS07860 PF04403 Paraquat-inducible protein A ISU60_RS07865 PF13185 GAF domain ISU60_RS07870 PF17516 ProQ C-terminal domain ISU60_RS07870 PF04352 ProQ/FINO family ISU60_RS07875 PF11818 C-terminal domain of tail specific protease (DUF3340) ISU60_RS07875 PF00595 PDZ domain ISU60_RS07875 PF03572 Peptidase family S41 ISU60_RS07875 PF17804 Tail specific protease N-terminal domain ISU60_RS07880 PF01435 Peptidase family M48 ISU60_RS07885 PF00419 Fimbrial protein ISU60_RS07890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS07890 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS07895 PF00577 Outer membrane usher protein ISU60_RS07895 PF13954 PapC N-terminal domain ISU60_RS07895 PF13953 PapC C-terminal domain ISU60_RS07905 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS07905 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS07910 PF07690 Major Facilitator Superfamily ISU60_RS07915 PF14583 Oligogalacturonate lyase ISU60_RS07920 PF01614 Bacterial transcriptional regulator ISU60_RS07920 PF09339 IclR helix-turn-helix domain ISU60_RS07925 PF01510 N-acetylmuramoyl-L-alanine amidase ISU60_RS07930 PF00375 Sodium:dicarboxylate symporter family ISU60_RS07935 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU60_RS07940 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU60_RS07945 PF01547 Bacterial extracellular solute-binding protein ISU60_RS07955 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS07960 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS07965 PF06917 Periplasmic pectate lyase ISU60_RS07975 PF04962 KduI/IolB family ISU60_RS07980 PF07883 Cupin domain ISU60_RS07985 PF00872 Transposase, Mutator family ISU60_RS07990 PF13419 Haloacid dehalogenase-like hydrolase ISU60_RS07995 PF14002 YniB-like protein ISU60_RS08000 PF03881 Fructosamine kinase ISU60_RS08010 PF00950 ABC 3 transport family ISU60_RS08015 PF00950 ABC 3 transport family ISU60_RS08020 PF00005 ABC transporter ISU60_RS08025 PF01297 Zinc-uptake complex component A periplasmic ISU60_RS08030 PF01464 Transglycosylase SLT domain ISU60_RS08035 PF01914 MarC family integral membrane protein ISU60_RS08045 PF13619 KTSC domain ISU60_RS08050 PF03129 Anticodon binding domain ISU60_RS08050 PF02824 TGS domain ISU60_RS08050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU60_RS08050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU60_RS08055 PF00707 Translation initiation factor IF-3, C-terminal domain ISU60_RS08055 PF05198 Translation initiation factor IF-3, N-terminal domain ISU60_RS08060 PF01632 Ribosomal protein L35 ISU60_RS08065 PF00453 Ribosomal protein L20 ISU60_RS08075 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISU60_RS08075 PF01409 tRNA synthetases class II core domain (F) ISU60_RS08080 PF03484 tRNA synthetase B5 domain ISU60_RS08080 PF03483 B3/4 domain ISU60_RS08080 PF03147 Ferredoxin-fold anticodon binding domain ISU60_RS08080 PF01588 Putative tRNA binding domain ISU60_RS08080 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISU60_RS08085 PF00216 Bacterial DNA-binding protein ISU60_RS08095 PF01032 FecCD transport family ISU60_RS08100 PF00255 Glutathione peroxidase ISU60_RS08105 PF00005 ABC transporter ISU60_RS08110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU60_RS08115 PF00535 Glycosyl transferase family 2 ISU60_RS08120 PF00551 Formyl transferase ISU60_RS08120 PF02911 Formyl transferase, C-terminal domain ISU60_RS08120 PF01370 NAD dependent epimerase/dehydratase family ISU60_RS08125 PF01522 Polysaccharide deacetylase ISU60_RS08130 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISU60_RS08135 PF00892 EamA-like transporter family ISU60_RS08150 PF00877 NlpC/P60 family ISU60_RS08155 PF10437 Bacterial lipoate protein ligase C-terminus ISU60_RS08155 PF03099 Biotin/lipoate A/B protein ligase family ISU60_RS08165 PF00793 DAHP synthetase I family ISU60_RS08170 PF03618 Kinase/pyrophosphorylase ISU60_RS08175 PF02896 PEP-utilising enzyme, TIM barrel domain ISU60_RS08175 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISU60_RS08175 PF00391 PEP-utilising enzyme, mobile domain ISU60_RS08185 PF01594 AI-2E family transporter ISU60_RS08190 PF02913 FAD linked oxidases, C-terminal domain ISU60_RS08190 PF01565 FAD binding domain ISU60_RS08190 PF13183 4Fe-4S dicluster domain ISU60_RS08195 PF03061 Thioesterase superfamily ISU60_RS08200 PF01521 Iron-sulphur cluster biosynthesis ISU60_RS08205 PF01458 Uncharacterized protein family (UPF0051) ISU60_RS08210 PF00005 ABC transporter ISU60_RS08215 PF01458 Uncharacterized protein family (UPF0051) ISU60_RS08220 PF00266 Aminotransferase class-V ISU60_RS08225 PF02657 Fe-S metabolism associated domain ISU60_RS08230 PF01476 LysM domain ISU60_RS08230 PF03734 L,D-transpeptidase catalytic domain ISU60_RS08230 PF17969 L,D-transpeptidase C-terminal domain ISU60_RS08235 PF01695 IstB-like ATP binding protein ISU60_RS08240 PF02796 Helix-turn-helix domain of resolvase ISU60_RS08240 PF00665 Integrase core domain ISU60_RS08250 PF04728 Lipoprotein leucine-zipper ISU60_RS08255 PF02887 Pyruvate kinase, alpha/beta domain ISU60_RS08255 PF00224 Pyruvate kinase, barrel domain ISU60_RS08270 PF01554 MatE ISU60_RS08280 PF00677 Lumazine binding domain ISU60_RS08290 PF07690 Major Facilitator Superfamily ISU60_RS08295 PF03466 LysR substrate binding domain ISU60_RS08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS08300 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS08310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU60_RS08310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU60_RS08315 PF00877 NlpC/P60 family ISU60_RS08320 PF00462 Glutaredoxin ISU60_RS08330 PF00929 Exonuclease ISU60_RS08335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU60_RS08340 PF18807 Tripartite Tc toxins repeat ISU60_RS08340 PF14431 YwqJ-like deaminase ISU60_RS08345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU60_RS08350 PF00440 Bacterial regulatory proteins, tetR family ISU60_RS08350 PF16925 Tetracyclin repressor-like, C-terminal domain ISU60_RS08355 PF08019 Phosphoethanolamine transferase EptA/EptB ISU60_RS08355 PF00884 Sulfatase ISU60_RS08360 PF06945 Protein of unknown function (DUF1289) ISU60_RS08365 PF00248 Aldo/keto reductase family ISU60_RS08370 PF01047 MarR family ISU60_RS08375 PF05433 Glycine zipper 2TM domain ISU60_RS08380 PF03702 Anhydro-N-acetylmuramic acid kinase ISU60_RS08385 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ISU60_RS08390 PF01243 Pyridoxamine 5'-phosphate oxidase ISU60_RS08390 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISU60_RS08395 PF01479 S4 domain ISU60_RS08395 PF00579 tRNA synthetases class I (W and Y) ISU60_RS08400 PF08543 Phosphomethylpyrimidine kinase ISU60_RS08405 PF00043 Glutathione S-transferase, C-terminal domain ISU60_RS08405 PF02798 Glutathione S-transferase, N-terminal domain ISU60_RS08410 PF11656 YjbD family (DUF3811) ISU60_RS08415 PF04893 Yip1 domain ISU60_RS08420 PF00854 POT family ISU60_RS08430 PF00005 ABC transporter ISU60_RS08435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_RS08435 PF00005 ABC transporter ISU60_RS08440 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS08440 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS08450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_RS08460 PF00158 Sigma-54 interaction domain ISU60_RS08460 PF02954 Bacterial regulatory protein, Fis family ISU60_RS08465 PF04012 PspA/IM30 family ISU60_RS08470 PF06667 Phage shock protein B ISU60_RS08475 PF04024 PspC domain ISU60_RS08485 PF04317 YcjX-like family, DUF463 ISU60_RS08490 PF05128 Domain of unknown function (DUF697) ISU60_RS08495 PF08808 RES domain ISU60_RS08500 PF09722 Protein of unknown function (DUF2384) ISU60_RS08505 PF00158 Sigma-54 interaction domain ISU60_RS08505 PF18024 Helix-turn-helix domain ISU60_RS08510 PF01797 Transposase IS200 like ISU60_RS08515 PF08534 Redoxin ISU60_RS08520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU60_RS08520 PF13378 Enolase C-terminal domain-like ISU60_RS08525 PF00246 Zinc carboxypeptidase ISU60_RS08530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_RS08535 PF01544 CorA-like Mg2+ transporter protein ISU60_RS08550 PF07859 alpha/beta hydrolase fold ISU60_RS08555 PF01171 PP-loop family ISU60_RS08560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ISU60_RS08560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ISU60_RS08560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_RS08560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ISU60_RS08560 PF10371 Domain of unknown function ISU60_RS08565 PF00893 Small Multidrug Resistance protein ISU60_RS08570 PF02308 MgtC family ISU60_RS08575 PF03891 Domain of unknown function (DUF333) ISU60_RS08580 PF03724 META domain ISU60_RS08585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_RS08585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_RS08590 PF11739 Dicarboxylate transport ISU60_RS08595 PF13617 YnbE-like lipoprotein ISU60_RS08600 PF07027 Protein of unknown function (DUF1318) ISU60_RS08605 PF01232 Mannitol dehydrogenase Rossmann domain ISU60_RS08605 PF08125 Mannitol dehydrogenase C-terminal domain ISU60_RS08610 PF00325 Bacterial regulatory proteins, crp family ISU60_RS08610 PF04198 Putative sugar-binding domain ISU60_RS08615 PF02525 Flavodoxin-like fold ISU60_RS08620 PF00271 Helicase conserved C-terminal domain ISU60_RS08620 PF00270 DEAD/DEAH box helicase ISU60_RS08620 PF04408 Helicase associated domain (HA2) ISU60_RS08620 PF11898 Domain of unknown function (DUF3418) ISU60_RS08620 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISU60_RS08635 PF00089 Trypsin ISU60_RS08645 PF01292 Prokaryotic cytochrome b561 ISU60_RS08650 PF04264 YceI-like domain ISU60_RS08670 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ISU60_RS08675 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS08675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS08675 PF00672 HAMP domain ISU60_RS08680 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS08680 PF00072 Response regulator receiver domain ISU60_RS08690 PF13520 Amino acid permease ISU60_RS08695 PF07338 Protein of unknown function (DUF1471) ISU60_RS08700 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISU60_RS08700 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISU60_RS08700 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISU60_RS08705 PF02233 NAD(P) transhydrogenase beta subunit ISU60_RS08710 PF00582 Universal stress protein family ISU60_RS08715 PF13545 Crp-like helix-turn-helix domain ISU60_RS08715 PF00027 Cyclic nucleotide-binding domain ISU60_RS08720 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU60_RS08720 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU60_RS08725 PF00245 Alkaline phosphatase ISU60_RS08735 PF13419 Haloacid dehalogenase-like hydrolase ISU60_RS08740 PF01842 ACT domain ISU60_RS08745 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_RS08745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_RS08745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_RS08775 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ISU60_RS08775 PF01048 Phosphorylase superfamily ISU60_RS08780 PF00005 ABC transporter ISU60_RS08785 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS08790 PF09084 NMT1/THI5 like ISU60_RS08805 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS08810 PF00654 Voltage gated chloride channel ISU60_RS08820 PF00480 ROK family ISU60_RS08825 PF03466 LysR substrate binding domain ISU60_RS08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS08830 PF07690 Major Facilitator Superfamily ISU60_RS08835 PF05472 DNA replication terminus site-binding protein (Ter protein) ISU60_RS08840 PF00206 Lyase ISU60_RS08840 PF10415 Fumarase C C-terminus ISU60_RS08845 PF01238 Phosphomannose isomerase type I ISU60_RS08850 PF06097 Bacterial protein of unknown function (DUF945) ISU60_RS08860 PF13593 SBF-like CPA transporter family (DUF4137) ISU60_RS08865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_RS08865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU60_RS08870 PF02311 AraC-like ligand binding domain ISU60_RS08870 PF12833 Helix-turn-helix domain ISU60_RS08875 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS08880 PF00005 ABC transporter ISU60_RS08885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_RS08890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_RS08895 PF11762 L-arabinose isomerase C-terminal domain ISU60_RS08895 PF02610 L-arabinose isomerase ISU60_RS08900 PF00664 ABC transporter transmembrane region ISU60_RS08900 PF00005 ABC transporter ISU60_RS08900 PF03412 Peptidase C39 family ISU60_RS08910 PF13533 Biotin-lipoyl like ISU60_RS08915 PF00005 ABC transporter ISU60_RS08915 PF00664 ABC transporter transmembrane region ISU60_RS08920 PF03412 Peptidase C39 family ISU60_RS08920 PF00664 ABC transporter transmembrane region ISU60_RS08920 PF00005 ABC transporter ISU60_RS08925 PF10754 Protein of unknown function (DUF2569) ISU60_RS08930 PF02508 Rnf-Nqr subunit, membrane protein ISU60_RS08935 PF04060 Putative Fe-S cluster ISU60_RS08940 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU60_RS08940 PF10531 SLBB domain ISU60_RS08940 PF13237 4Fe-4S dicluster domain ISU60_RS08940 PF13375 RnfC Barrel sandwich hybrid domain ISU60_RS08945 PF06445 GyrI-like small molecule binding domain ISU60_RS08945 PF12833 Helix-turn-helix domain ISU60_RS08950 PF03116 NQR2, RnfD, RnfE family ISU60_RS08955 PF04205 FMN-binding domain ISU60_RS08960 PF02508 Rnf-Nqr subunit, membrane protein ISU60_RS08965 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU60_RS08965 PF00633 Helix-hairpin-helix motif ISU60_RS08965 PF10576 Iron-sulfur binding domain of endonuclease III ISU60_RS08970 PF01370 NAD dependent epimerase/dehydratase family ISU60_RS08975 PF07690 Major Facilitator Superfamily ISU60_RS08980 PF00773 RNB domain ISU60_RS08980 PF08206 Ribonuclease B OB domain ISU60_RS08980 PF00575 S1 RNA binding domain ISU60_RS08980 PF17876 Cold shock domain ISU60_RS08985 PF02554 Carbon starvation protein CstA ISU60_RS08985 PF13722 5TM C-terminal transporter carbon starvation CstA ISU60_RS08990 PF04328 Selenoprotein, putative ISU60_RS08995 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU60_RS09005 PF00596 Class II Aldolase and Adducin N-terminal domain ISU60_RS09010 PF05433 Glycine zipper 2TM domain ISU60_RS09015 PF01253 Translation initiation factor SUI1 ISU60_RS09020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISU60_RS09030 PF18073 Rubredoxin metal binding domain ISU60_RS09035 PF06305 Lipopolysaccharide assembly protein A domain ISU60_RS09040 PF01569 PAP2 superfamily ISU60_RS09045 PF00925 GTP cyclohydrolase II ISU60_RS09050 PF00330 Aconitase family (aconitate hydratase) ISU60_RS09050 PF00694 Aconitase C-terminal domain ISU60_RS09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS09060 PF03466 LysR substrate binding domain ISU60_RS09065 PF08272 Topoisomerase I zinc-ribbon-like ISU60_RS09065 PF01131 DNA topoisomerase ISU60_RS09065 PF01751 Toprim domain ISU60_RS09065 PF01396 Topoisomerase DNA binding C4 zinc finger ISU60_RS09075 PF10692 Protein of unknown function (DUF2498) ISU60_RS09080 PF01343 Peptidase family S49 ISU60_RS09080 PF08496 Peptidase family S49 N-terminal ISU60_RS09085 PF00106 short chain dehydrogenase ISU60_RS09090 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ISU60_RS09095 PF00849 RNA pseudouridylate synthase ISU60_RS09095 PF01479 S4 domain ISU60_RS09100 PF01300 Telomere recombination ISU60_RS09105 PF02811 PHP domain ISU60_RS09115 PF00425 chorismate binding enzyme ISU60_RS09115 PF04715 Anthranilate synthase component I, N terminal region ISU60_RS09120 PF00117 Glutamine amidotransferase class-I ISU60_RS09125 PF00591 Glycosyl transferase family, a/b domain ISU60_RS09125 PF02885 Glycosyl transferase family, helical bundle domain ISU60_RS09130 PF00218 Indole-3-glycerol phosphate synthase ISU60_RS09130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISU60_RS09135 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_RS09140 PF00290 Tryptophan synthase alpha chain ISU60_RS09150 PF03922 OmpW family ISU60_RS09175 PF04279 Intracellular septation protein A ISU60_RS09180 PF03061 Thioesterase superfamily ISU60_RS09185 PF00872 Transposase, Mutator family ISU60_RS09190 PF03544 Gram-negative bacterial TonB protein C-terminal ISU60_RS09195 PF03795 YCII-related domain ISU60_RS09210 PF13505 Outer membrane protein beta-barrel domain ISU60_RS09225 PF13091 PLD-like domain ISU60_RS09225 PF13396 Phospholipase_D-nuclease N-terminal ISU60_RS09230 PF04269 Protein of unknown function, DUF440 ISU60_RS09240 PF00005 ABC transporter ISU60_RS09240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_RS09245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_RS09245 PF00005 ABC transporter ISU60_RS09250 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_RS09250 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS09255 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS09260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_RS09265 PF01914 MarC family integral membrane protein ISU60_RS09270 PF00465 Iron-containing alcohol dehydrogenase ISU60_RS09270 PF00171 Aldehyde dehydrogenase family ISU60_RS09275 PF02796 Helix-turn-helix domain of resolvase ISU60_RS09275 PF00665 Integrase core domain ISU60_RS09280 PF01695 IstB-like ATP binding protein ISU60_RS09285 PF00265 Thymidine kinase ISU60_RS09290 PF00816 H-NS histone family ISU60_RS09295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU60_RS09295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU60_RS09295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU60_RS09300 PF00072 Response regulator receiver domain ISU60_RS09305 PF02810 SEC-C motif ISU60_RS09310 PF01842 ACT domain ISU60_RS09310 PF00551 Formyl transferase ISU60_RS09315 PF00872 Transposase, Mutator family ISU60_RS09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS09320 PF03466 LysR substrate binding domain ISU60_RS09325 PF03372 Endonuclease/Exonuclease/phosphatase family ISU60_RS09330 PF00293 NUDIX domain ISU60_RS09335 PF07383 Protein of unknown function (DUF1496) ISU60_RS09340 PF01131 DNA topoisomerase ISU60_RS09340 PF01751 Toprim domain ISU60_RS09345 PF02769 AIR synthase related protein, C-terminal domain ISU60_RS09345 PF00586 AIR synthase related protein, N-terminal domain ISU60_RS09350 PF00881 Nitroreductase family ISU60_RS09355 PF01343 Peptidase family S49 ISU60_RS09360 PF00710 Asparaginase, N-terminal ISU60_RS09360 PF17763 Glutaminase/Asparaginase C-terminal domain ISU60_RS09365 PF00857 Isochorismatase family ISU60_RS09370 PF07023 Protein of unknown function (DUF1315) ISU60_RS09375 PF01641 SelR domain ISU60_RS09380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU60_RS09380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU60_RS09385 PF01263 Aldose 1-epimerase ISU60_RS09390 PF06629 MltA-interacting protein MipA ISU60_RS09395 PF08298 PrkA AAA domain ISU60_RS09395 PF06798 PrkA serine protein kinase C-terminal domain ISU60_RS09400 PF04285 Protein of unknown function (DUF444) ISU60_RS09410 PF03466 LysR substrate binding domain ISU60_RS09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS09415 PF05726 Pirin C-terminal cupin domain ISU60_RS09415 PF02678 Pirin ISU60_RS09420 PF07690 Major Facilitator Superfamily ISU60_RS09425 PF01266 FAD dependent oxidoreductase ISU60_RS09430 PF04293 SpoVR like protein ISU60_RS09435 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS09435 PF07840 FadR C-terminal domain ISU60_RS09440 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ISU60_RS09445 PF02600 Disulfide bond formation protein DsbB ISU60_RS09460 PF00266 Aminotransferase class-V ISU60_RS09470 PF00872 Transposase, Mutator family ISU60_RS09475 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ISU60_RS09630 PF00872 Transposase, Mutator family ISU60_RS09695 PF06530 Phage antitermination protein Q ISU60_RS09705 PF05772 NinB protein ISU60_RS09720 PF01695 IstB-like ATP binding protein ISU60_RS09725 PF02796 Helix-turn-helix domain of resolvase ISU60_RS09725 PF00665 Integrase core domain ISU60_RS09730 PF00589 Phage integrase family ISU60_RS09730 PF12167 Arm DNA-binding domain ISU60_RS09735 PF03692 Putative zinc- or iron-chelating domain ISU60_RS09740 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_RS09745 PF13406 Transglycosylase SLT domain ISU60_RS09750 PF05166 YcgL domain ISU60_RS09755 PF03775 Septum formation inhibitor MinC, C-terminal domain ISU60_RS09755 PF05209 Septum formation inhibitor MinC, N-terminal domain ISU60_RS09760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISU60_RS09765 PF03776 Septum formation topological specificity factor MinE ISU60_RS09770 PF01612 3'-5' exonuclease ISU60_RS09770 PF00570 HRDC domain ISU60_RS09775 PF00501 AMP-binding enzyme ISU60_RS09775 PF13193 AMP-binding enzyme C-terminal domain ISU60_RS09785 PF03843 Outer membrane lipoprotein Slp family ISU60_RS09790 PF00814 Glycoprotease family ISU60_RS09795 PF04851 Type III restriction enzyme, res subunit ISU60_RS09795 PF13307 Helicase C-terminal domain ISU60_RS09800 PF01042 Endoribonuclease L-PSP ISU60_RS09805 PF00893 Small Multidrug Resistance protein ISU60_RS09810 PF00893 Small Multidrug Resistance protein ISU60_RS09815 PF01081 KDPG and KHG aldolase ISU60_RS09820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISU60_RS09820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISU60_RS09825 PF01380 SIS domain ISU60_RS09825 PF01418 Helix-turn-helix domain, rpiR family ISU60_RS09830 PF02887 Pyruvate kinase, alpha/beta domain ISU60_RS09830 PF00224 Pyruvate kinase, barrel domain ISU60_RS09840 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU60_RS09845 PF01476 LysM domain ISU60_RS09845 PF08525 Opacity-associated protein A N-terminal motif ISU60_RS09845 PF01551 Peptidase family M23 ISU60_RS09850 PF01297 Zinc-uptake complex component A periplasmic ISU60_RS09855 PF00005 ABC transporter ISU60_RS09860 PF00950 ABC 3 transport family ISU60_RS09865 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISU60_RS09865 PF05491 RuvB C-terminal winged helix domain ISU60_RS09865 PF17864 RuvB AAA lid domain ISU60_RS09870 PF01330 RuvA N terminal domain ISU60_RS09870 PF07499 RuvA, C-terminal domain ISU60_RS09875 PF02075 Crossover junction endodeoxyribonuclease RuvC ISU60_RS09880 PF01709 Transcriptional regulator ISU60_RS09885 PF00293 NUDIX domain ISU60_RS09890 PF01336 OB-fold nucleic acid binding domain ISU60_RS09890 PF02938 GAD domain ISU60_RS09890 PF00152 tRNA synthetases class II (D, K and N) ISU60_RS09895 PF01904 Protein of unknown function DUF72 ISU60_RS09900 PF01124 MAPEG family ISU60_RS09905 PF13649 Methyltransferase domain ISU60_RS09910 PF08003 Protein of unknown function (DUF1698) ISU60_RS09915 PF03932 CutC family ISU60_RS09920 PF06185 YecM protein ISU60_RS09925 PF00750 tRNA synthetases class I (R) ISU60_RS09925 PF05746 DALR anticodon binding domain ISU60_RS09925 PF03485 Arginyl tRNA synthetase N terminal domain ISU60_RS09930 PF05860 haemagglutination activity domain ISU60_RS09930 PF13332 Hemagglutinin repeat ISU60_RS09935 PF08479 POTRA domain, ShlB-type ISU60_RS09935 PF17287 POTRA domain ISU60_RS09935 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_RS09940 PF03023 Lipid II flippase MurJ ISU60_RS09945 PF04337 Protein of unknown function, DUF480 ISU60_RS09950 PF13302 Acetyltransferase (GNAT) domain ISU60_RS09960 PF07273 Protein of unknown function (DUF1439) ISU60_RS09965 PF02613 Nitrate reductase delta subunit ISU60_RS09970 PF02811 PHP domain ISU60_RS09980 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISU60_RS09980 PF00480 ROK family ISU60_RS09985 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU60_RS10000 PF08402 TOBE domain ISU60_RS10000 PF00005 ABC transporter ISU60_RS10005 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS10010 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS10020 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU60_RS10030 PF00916 Sulfate permease family ISU60_RS10030 PF01740 STAS domain ISU60_RS10035 PF00793 DAHP synthetase I family ISU60_RS10040 PF13369 Transglutaminase-like superfamily ISU60_RS10045 PF04247 Invasion gene expression up-regulator, SirB ISU60_RS10050 PF13847 Methyltransferase domain ISU60_RS10050 PF17827 PrmC N-terminal domain ISU60_RS10055 PF03462 PCRF domain ISU60_RS10055 PF00472 RF-1 domain ISU60_RS10060 PF01488 Shikimate / quinate 5-dehydrogenase ISU60_RS10060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISU60_RS10060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISU60_RS10065 PF03550 Outer membrane lipoprotein LolB ISU60_RS10070 PF00288 GHMP kinases N terminal domain ISU60_RS10070 PF08544 GHMP kinases C terminal ISU60_RS10075 PF14572 Phosphoribosyl synthetase-associated domain ISU60_RS10075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISU60_RS10080 PF10762 Protein of unknown function (DUF2583) ISU60_RS10085 PF01195 Peptidyl-tRNA hydrolase ISU60_RS10090 PF01926 50S ribosome-binding GTPase ISU60_RS10090 PF06071 Protein of unknown function (DUF933) ISU60_RS10130 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISU60_RS10135 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS10135 PF00072 Response regulator receiver domain ISU60_RS10140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS10140 PF00672 HAMP domain ISU60_RS10140 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS10185 PF08242 Methyltransferase domain ISU60_RS10205 PF00872 Transposase, Mutator family ISU60_RS10250 PF01370 NAD dependent epimerase/dehydratase family ISU60_RS10255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU60_RS10255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU60_RS10260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU60_RS10260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU60_RS10270 PF05962 HutD ISU60_RS10275 PF01979 Amidohydrolase family ISU60_RS10280 PF07702 UTRA domain ISU60_RS10280 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS10285 PF01979 Amidohydrolase family ISU60_RS10300 PF01695 IstB-like ATP binding protein ISU60_RS10305 PF00665 Integrase core domain ISU60_RS10305 PF02796 Helix-turn-helix domain of resolvase ISU60_RS10315 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ISU60_RS10320 PF04996 Succinylarginine dihydrolase ISU60_RS10325 PF00171 Aldehyde dehydrogenase family ISU60_RS10335 PF00202 Aminotransferase class-III ISU60_RS10340 PF00155 Aminotransferase class I and II ISU60_RS10340 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS10350 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISU60_RS10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS10350 PF00672 HAMP domain ISU60_RS10350 PF07730 Histidine kinase ISU60_RS10355 PF01699 Sodium/calcium exchanger protein ISU60_RS10360 PF02562 PhoH-like protein ISU60_RS10375 PF13994 PgaD-like protein ISU60_RS10380 PF00535 Glycosyl transferase family 2 ISU60_RS10385 PF14883 Hypothetical glycosyl hydrolase family 13 ISU60_RS10385 PF01522 Polysaccharide deacetylase ISU60_RS10395 PF00557 Metallopeptidase family M24 ISU60_RS10400 PF03848 Tellurite resistance protein TehB ISU60_RS10400 PF09313 Domain of unknown function (DUF1971) ISU60_RS10410 PF00578 AhpC/TSA family ISU60_RS10415 PF00005 ABC transporter ISU60_RS10415 PF02687 FtsX-like permease family ISU60_RS10415 PF12704 MacB-like periplasmic core domain ISU60_RS10425 PF12704 MacB-like periplasmic core domain ISU60_RS10425 PF02687 FtsX-like permease family ISU60_RS10425 PF00005 ABC transporter ISU60_RS10435 PF10634 Fe2+ transport protein ISU60_RS10440 PF03239 Iron permease FTR1 family ISU60_RS10455 PF04960 Glutaminase ISU60_RS10465 PF08220 DeoR-like helix-turn-helix domain ISU60_RS10465 PF00455 DeoR C terminal sensor domain ISU60_RS10470 PF00324 Amino acid permease ISU60_RS10475 PF00155 Aminotransferase class I and II ISU60_RS10480 PF02508 Rnf-Nqr subunit, membrane protein ISU60_RS10490 PF04909 Amidohydrolase ISU60_RS10495 PF07690 Major Facilitator Superfamily ISU60_RS10510 PF03466 LysR substrate binding domain ISU60_RS10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS10515 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU60_RS10520 PF01575 MaoC like domain ISU60_RS10525 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISU60_RS10525 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISU60_RS10530 PF00072 Response regulator receiver domain ISU60_RS10530 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS10535 PF01627 Hpt domain ISU60_RS10535 PF00989 PAS fold ISU60_RS10535 PF00072 Response regulator receiver domain ISU60_RS10535 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS10535 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS10545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS10545 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS10550 PF13953 PapC C-terminal domain ISU60_RS10550 PF13954 PapC N-terminal domain ISU60_RS10550 PF00577 Outer membrane usher protein ISU60_RS10560 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS10560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS10570 PF13356 Arm DNA-binding domain ISU60_RS10570 PF00589 Phage integrase family ISU60_RS10575 PF00425 chorismate binding enzyme ISU60_RS10580 PF07690 Major Facilitator Superfamily ISU60_RS10585 PF00664 ABC transporter transmembrane region ISU60_RS10585 PF00005 ABC transporter ISU60_RS10590 PF00664 ABC transporter transmembrane region ISU60_RS10590 PF00005 ABC transporter ISU60_RS10590 PF04954 Siderophore-interacting protein ISU60_RS10590 PF08021 Siderophore-interacting FAD-binding domain ISU60_RS10600 PF00668 Condensation domain ISU60_RS10600 PF08242 Methyltransferase domain ISU60_RS10600 PF00550 Phosphopantetheine attachment site ISU60_RS10600 PF00501 AMP-binding enzyme ISU60_RS10605 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_RS10605 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_RS10605 PF16197 Ketoacyl-synthetase C-terminal extension ISU60_RS10605 PF00668 Condensation domain ISU60_RS10605 PF00550 Phosphopantetheine attachment site ISU60_RS10605 PF00698 Acyl transferase domain ISU60_RS10615 PF00975 Thioesterase domain ISU60_RS10620 PF13193 AMP-binding enzyme C-terminal domain ISU60_RS10620 PF00501 AMP-binding enzyme ISU60_RS10625 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS10625 PF00593 TonB dependent receptor ISU60_RS10660 PF01695 IstB-like ATP binding protein ISU60_RS10665 PF02796 Helix-turn-helix domain of resolvase ISU60_RS10665 PF00665 Integrase core domain ISU60_RS10685 PF08402 TOBE domain ISU60_RS10685 PF00005 ABC transporter ISU60_RS10690 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS10695 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS10705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_RS10705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU60_RS10710 PF07702 UTRA domain ISU60_RS10710 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS10780 PF05638 Type VI secretion system effector, Hcp ISU60_RS10825 PF01066 CDP-alcohol phosphatidyltransferase ISU60_RS10830 PF01541 GIY-YIG catalytic domain ISU60_RS10830 PF02151 UvrB/uvrC motif ISU60_RS10830 PF08459 UvrC Helix-hairpin-helix N-terminal ISU60_RS10835 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS10835 PF00072 Response regulator receiver domain ISU60_RS10840 PF10769 Protein of unknown function (DUF2594) ISU60_RS10845 PF06942 GlpM protein ISU60_RS10855 PF13505 Outer membrane protein beta-barrel domain ISU60_RS10865 PF00324 Amino acid permease ISU60_RS10870 PF01344 Kelch motif ISU60_RS10875 PF03358 NADPH-dependent FMN reductase ISU60_RS10880 PF04261 Dyp-type peroxidase family ISU60_RS10885 PF09375 Imelysin ISU60_RS10885 PF13473 Cupredoxin-like domain ISU60_RS10890 PF03239 Iron permease FTR1 family ISU60_RS10895 PF00474 Sodium:solute symporter family ISU60_RS10905 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISU60_RS10905 PF14850 DNA-binding domain of Proline dehydrogenase ISU60_RS10905 PF01619 Proline dehydrogenase ISU60_RS10905 PF00171 Aldehyde dehydrogenase family ISU60_RS10920 PF00005 ABC transporter ISU60_RS10925 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS10930 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS10935 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_RS10940 PF02899 Phage integrase, N-terminal SAM-like domain ISU60_RS10945 PF04542 Sigma-70 region 2 ISU60_RS10945 PF04539 Sigma-70 region 3 ISU60_RS10945 PF04545 Sigma-70, region 4 ISU60_RS10950 PF08884 Flagellin D3 domain ISU60_RS10950 PF00700 Bacterial flagellin C-terminal helical region ISU60_RS10950 PF00669 Bacterial flagellin N-terminal helical region ISU60_RS10955 PF02465 Flagellar hook-associated protein 2 N-terminus ISU60_RS10955 PF07195 Flagellar hook-associated protein 2 C-terminus ISU60_RS10955 PF07196 Flagellin hook IN motif ISU60_RS10960 PF02561 Flagellar protein FliS ISU60_RS10965 PF05400 Flagellar protein FliT ISU60_RS10970 PF12833 Helix-turn-helix domain ISU60_RS10975 PF00211 Adenylate and Guanylate cyclase catalytic domain ISU60_RS10975 PF02743 Cache domain ISU60_RS10975 PF00672 HAMP domain ISU60_RS10980 PF01966 HD domain ISU60_RS10985 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU60_RS11005 PF02049 Flagellar hook-basal body complex protein FliE ISU60_RS11010 PF08345 Flagellar M-ring protein C-terminal ISU60_RS11010 PF01514 Secretory protein of YscJ/FliF family ISU60_RS11015 PF01706 FliG C-terminal domain ISU60_RS11015 PF14841 FliG middle domain ISU60_RS11015 PF14842 FliG N-terminal domain ISU60_RS11020 PF02108 Flagellar assembly protein FliH ISU60_RS11025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_RS11025 PF18269 T3SS EscN ATPase C-terminal domain ISU60_RS11030 PF02050 Flagellar FliJ protein ISU60_RS11035 PF02120 Flagellar hook-length control protein FliK ISU60_RS11040 PF03748 Flagellar basal body-associated protein FliL ISU60_RS11045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU60_RS11045 PF02154 Flagellar motor switch protein FliM ISU60_RS11050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU60_RS11050 PF16973 Flagellar motor switch protein FliN N-terminal ISU60_RS11055 PF04347 Flagellar biosynthesis protein, FliO ISU60_RS11060 PF00813 FliP family ISU60_RS11065 PF01313 Bacterial export proteins, family 3 ISU60_RS11070 PF01311 Bacterial export proteins, family 1 ISU60_RS11085 PF00294 pfkB family carbohydrate kinase ISU60_RS11090 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS11095 PF00005 ABC transporter ISU60_RS11100 PF13407 Periplasmic binding protein domain ISU60_RS11105 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS11110 PF00596 Class II Aldolase and Adducin N-terminal domain ISU60_RS11115 PF04198 Putative sugar-binding domain ISU60_RS11120 PF00669 Bacterial flagellin N-terminal helical region ISU60_RS11125 PF00460 Flagella basal body rod protein ISU60_RS11125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_RS11130 PF10135 Rod binding protein ISU60_RS11130 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISU60_RS11135 PF02119 Flagellar P-ring protein ISU60_RS11140 PF02107 Flagellar L-ring protein ISU60_RS11155 PF00460 Flagella basal body rod protein ISU60_RS11155 PF07559 Flagellar basal body protein FlaE ISU60_RS11155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_RS11160 PF03963 Flagellar hook capping protein - N-terminal region ISU60_RS11160 PF13860 FlgD Ig-like domain ISU60_RS11160 PF13861 FlgD Tudor-like domain ISU60_RS11165 PF00460 Flagella basal body rod protein ISU60_RS11165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_RS11170 PF00460 Flagella basal body rod protein ISU60_RS11175 PF13144 Chaperone for flagella basal body P-ring formation ISU60_RS11175 PF17656 FlgA N-terminal domain ISU60_RS11180 PF04316 Anti-sigma-28 factor, FlgM ISU60_RS11185 PF05130 FlgN protein ISU60_RS11205 PF06366 Flagellar protein FlhE ISU60_RS11210 PF00771 FHIPEP family ISU60_RS11215 PF01312 FlhB HrpN YscU SpaS Family ISU60_RS11230 PF10709 Protein of unknown function (DUF2511) ISU60_RS11240 PF04234 CopC domain ISU60_RS11245 PF00210 Ferritin-like domain ISU60_RS11250 PF06440 DNA polymerase III, theta subunit ISU60_RS11255 PF00561 alpha/beta hydrolase fold ISU60_RS11260 PF00326 Prolyl oligopeptidase family ISU60_RS11260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISU60_RS11265 PF13995 YebF-like protein ISU60_RS11270 PF04266 ASCH domain ISU60_RS11275 PF07130 YebG protein ISU60_RS11280 PF00270 DEAD/DEAH box helicase ISU60_RS11280 PF00271 Helicase conserved C-terminal domain ISU60_RS11280 PF03880 DbpA RNA binding domain ISU60_RS11285 PF02222 ATP-grasp domain ISU60_RS11290 PF03701 Uncharacterised protein family (UPF0181) ISU60_RS11295 PF04715 Anthranilate synthase component I, N terminal region ISU60_RS11295 PF00425 chorismate binding enzyme ISU60_RS11300 PF00293 NUDIX domain ISU60_RS11305 PF03313 Serine dehydratase alpha chain ISU60_RS11305 PF03315 Serine dehydratase beta chain ISU60_RS11310 PF01613 Flavin reductase like domain ISU60_RS11315 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ISU60_RS11315 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ISU60_RS11320 PF07690 Major Facilitator Superfamily ISU60_RS11325 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU60_RS11330 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_RS11335 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ISU60_RS11340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU60_RS11345 PF00171 Aldehyde dehydrogenase family ISU60_RS11350 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_RS11355 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_RS11360 PF01047 MarR family ISU60_RS11365 PF03741 Integral membrane protein TerC family ISU60_RS11365 PF03471 Transporter associated domain ISU60_RS11370 PF03610 PTS system fructose IIA component ISU60_RS11370 PF03830 PTS system sorbose subfamily IIB component ISU60_RS11375 PF03609 PTS system sorbose-specific iic component ISU60_RS11380 PF03613 PTS system mannose/fructose/sorbose family IID component ISU60_RS11385 PF06173 Protein of unknown function (DUF986) ISU60_RS11390 PF02659 Putative manganese efflux pump ISU60_RS11395 PF00593 TonB dependent receptor ISU60_RS11395 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS11400 PF13426 PAS domain ISU60_RS11400 PF08448 PAS fold ISU60_RS11400 PF08447 PAS fold ISU60_RS11400 PF05231 MASE1 ISU60_RS11400 PF00990 Diguanylate cyclase, GGDEF domain ISU60_RS11400 PF00563 EAL domain ISU60_RS11410 PF13847 Methyltransferase domain ISU60_RS11415 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU60_RS11420 PF00313 'Cold-shock' DNA-binding domain ISU60_RS11425 PF10736 Protein of unknown function (DUF2627) ISU60_RS11430 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ISU60_RS11435 PF00324 Amino acid permease ISU60_RS11450 PF13974 YebO-like protein ISU60_RS11455 PF13998 MgrB protein ISU60_RS11460 PF13996 YobH-like protein ISU60_RS11465 PF10964 Protein of unknown function (DUF2766) ISU60_RS11470 PF12833 Helix-turn-helix domain ISU60_RS11480 PF00664 ABC transporter transmembrane region ISU60_RS11480 PF00005 ABC transporter ISU60_RS11495 PF06167 Glucose-regulated metallo-peptidase M90 ISU60_RS11505 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS11505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_RS11510 PF01695 IstB-like ATP binding protein ISU60_RS11515 PF00665 Integrase core domain ISU60_RS11515 PF02796 Helix-turn-helix domain of resolvase ISU60_RS11525 PF00872 Transposase, Mutator family ISU60_RS11530 PF01306 LacY proton/sugar symporter ISU60_RS11535 PF16874 Glycosyl hydrolase family 36 C-terminal domain ISU60_RS11535 PF16875 Glycosyl hydrolase family 36 N-terminal domain ISU60_RS11545 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ISU60_RS11545 PF01648 4'-phosphopantetheinyl transferase superfamily ISU60_RS11550 PF03480 Bacterial extracellular solute-binding protein, family 7 ISU60_RS11560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISU60_RS11565 PF00072 Response regulator receiver domain ISU60_RS11565 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS11575 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ISU60_RS11585 PF01522 Polysaccharide deacetylase ISU60_RS11595 PF01554 MatE ISU60_RS11600 PF00764 Arginosuccinate synthase ISU60_RS11605 PF01070 FMN-dependent dehydrogenase ISU60_RS11610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU60_RS11610 PF13378 Enolase C-terminal domain-like ISU60_RS11615 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU60_RS11625 PF04134 Protein of unknown function, DUF393 ISU60_RS11630 PF07690 Major Facilitator Superfamily ISU60_RS11640 PF11924 Inverse autotransporter, beta-domain ISU60_RS11640 PF02369 Bacterial Ig-like domain (group 1) ISU60_RS11640 PF09134 Invasin, domain 3 ISU60_RS11645 PF00872 Transposase, Mutator family ISU60_RS11650 PF04363 Protein of unknown function (DUF496) ISU60_RS11660 PF08411 Exonuclease C-terminal ISU60_RS11660 PF00929 Exonuclease ISU60_RS11670 PF13520 Amino acid permease ISU60_RS11675 PF00465 Iron-containing alcohol dehydrogenase ISU60_RS11680 PF00005 ABC transporter ISU60_RS11685 PF00005 ABC transporter ISU60_RS11690 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS11705 PF01370 NAD dependent epimerase/dehydratase family ISU60_RS11715 PF01634 ATP phosphoribosyltransferase ISU60_RS11715 PF08029 HisG, C-terminal domain ISU60_RS11720 PF00815 Histidinol dehydrogenase ISU60_RS11725 PF00155 Aminotransferase class I and II ISU60_RS11730 PF00475 Imidazoleglycerol-phosphate dehydratase ISU60_RS11735 PF00117 Glutamine amidotransferase class-I ISU60_RS11740 PF00977 Histidine biosynthesis protein ISU60_RS11745 PF00977 Histidine biosynthesis protein ISU60_RS11750 PF01502 Phosphoribosyl-AMP cyclohydrolase ISU60_RS11750 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISU60_RS11755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU60_RS11755 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISU60_RS11760 PF00483 Nucleotidyl transferase ISU60_RS11765 PF00483 Nucleotidyl transferase ISU60_RS11770 PF04183 IucA / IucC family ISU60_RS11770 PF06276 Ferric iron reductase FhuF-like transporter ISU60_RS11775 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS11775 PF00593 TonB dependent receptor ISU60_RS11775 PF07660 Secretin and TonB N terminus short domain ISU60_RS11780 PF01497 Periplasmic binding protein ISU60_RS11785 PF01032 FecCD transport family ISU60_RS11790 PF01032 FecCD transport family ISU60_RS11795 PF00005 ABC transporter ISU60_RS11800 PF06276 Ferric iron reductase FhuF-like transporter ISU60_RS11800 PF04183 IucA / IucC family ISU60_RS11810 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU60_RS11815 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISU60_RS11820 PF06276 Ferric iron reductase FhuF-like transporter ISU60_RS11820 PF11575 FhuF 2Fe-2S C-terminal domain ISU60_RS11825 PF00571 CBS domain ISU60_RS11825 PF03471 Transporter associated domain ISU60_RS11825 PF03741 Integral membrane protein TerC family ISU60_RS11830 PF05170 AsmA family ISU60_RS11835 PF00692 dUTPase ISU60_RS11840 PF00485 Phosphoribulokinase / Uridine kinase family ISU60_RS11845 PF10609 NUBPL iron-transfer P-loop NTPase ISU60_RS11850 PF09334 tRNA synthetases class I (M) ISU60_RS11850 PF01588 Putative tRNA binding domain ISU60_RS11855 PF01797 Transposase IS200 like ISU60_RS11875 PF07690 Major Facilitator Superfamily ISU60_RS11880 PF03788 LrgA family ISU60_RS11885 PF04172 LrgB-like family ISU60_RS11890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU60_RS11890 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ISU60_RS11895 PF03949 Malic enzyme, NAD binding domain ISU60_RS11895 PF00390 Malic enzyme, N-terminal domain ISU60_RS11900 PF02698 DUF218 domain ISU60_RS11905 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS11910 PF00005 ABC transporter ISU60_RS11915 PF13407 Periplasmic binding protein domain ISU60_RS11920 PF04235 Protein of unknown function (DUF418) ISU60_RS11925 PF01227 GTP cyclohydrolase I ISU60_RS11930 PF06779 Uncharacterised MFS-type transporter YbfB ISU60_RS11935 PF03466 LysR substrate binding domain ISU60_RS11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS11940 PF00107 Zinc-binding dehydrogenase ISU60_RS11940 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_RS11945 PF00756 Putative esterase ISU60_RS11960 PF13533 Biotin-lipoyl like ISU60_RS11965 PF00005 ABC transporter ISU60_RS11975 PF03454 MoeA C-terminal region (domain IV) ISU60_RS11975 PF03453 MoeA N-terminal region (domain I and II) ISU60_RS11975 PF00994 Probable molybdopterin binding domain ISU60_RS11980 PF00899 ThiF family ISU60_RS11985 PF00872 Transposase, Mutator family ISU60_RS11995 PF00005 ABC transporter ISU60_RS11995 PF12848 ABC transporter ISU60_RS12085 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU60_RS12085 PF04717 Type VI secretion system, phage-baseplate injector ISU60_RS12085 PF13296 Putative type VI secretion system Rhs element Vgr ISU60_RS12090 PF07724 AAA domain (Cdc48 subfamily) ISU60_RS12090 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS12090 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_RS12090 PF17871 AAA lid domain ISU60_RS12100 PF05736 OprF membrane domain ISU60_RS12100 PF00691 OmpA family ISU60_RS12115 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_RS12125 PF00698 Acyl transferase domain ISU60_RS12130 PF00550 Phosphopantetheine attachment site ISU60_RS12145 PF00378 Enoyl-CoA hydratase/isomerase ISU60_RS12155 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ISU60_RS12155 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ISU60_RS12165 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU60_RS12165 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU60_RS12170 PF07977 FabA-like domain ISU60_RS12185 PF01565 FAD binding domain ISU60_RS12185 PF08031 Berberine and berberine like ISU60_RS12205 PF04358 DsrC like protein ISU60_RS12210 PF00708 Acylphosphatase ISU60_RS12215 PF17785 PUA-like domain ISU60_RS12215 PF10672 S-adenosylmethionine-dependent methyltransferase ISU60_RS12220 PF08755 Hemimethylated DNA-binding protein YccV like ISU60_RS12225 PF13380 CoA binding domain ISU60_RS12230 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ISU60_RS12235 PF02142 MGS-like domain ISU60_RS12240 PF00580 UvrD/REP helicase N-terminal domain ISU60_RS12240 PF12462 DNA helicase IV / RNA helicase N terminal ISU60_RS12240 PF13361 UvrD-like helicase C-terminal domain ISU60_RS12245 PF03733 Inner membrane component domain ISU60_RS12250 PF12805 FUSC-like inner membrane protein yccS ISU60_RS12255 PF04993 TfoX N-terminal domain ISU60_RS12255 PF04994 TfoX C-terminal domain ISU60_RS12260 PF03846 Cell division inhibitor SulA ISU60_RS12265 PF00691 OmpA family ISU60_RS12265 PF01389 OmpA-like transmembrane domain ISU60_RS12270 PF01797 Transposase IS200 like ISU60_RS12275 PF06303 MatP N-terminal domain ISU60_RS12275 PF17414 MatP C-terminal ribbon-helix-helix domain ISU60_RS12280 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU60_RS12280 PF13654 AAA domain ISU60_RS12285 PF07977 FabA-like domain ISU60_RS12300 PF00665 Integrase core domain ISU60_RS12300 PF02796 Helix-turn-helix domain of resolvase ISU60_RS12305 PF01695 IstB-like ATP binding protein ISU60_RS12315 PF01797 Transposase IS200 like ISU60_RS12320 PF04957 Ribosome modulation factor ISU60_RS12325 PF03886 ABC-type transport auxiliary lipoprotein component ISU60_RS12335 PF02470 MlaD protein ISU60_RS12340 PF04403 Paraquat-inducible protein A ISU60_RS12345 PF16326 ABC transporter C-terminal domain ISU60_RS12345 PF00005 ABC transporter ISU60_RS12345 PF12848 ABC transporter ISU60_RS12350 PF02926 THUMP domain ISU60_RS12350 PF10672 S-adenosylmethionine-dependent methyltransferase ISU60_RS12350 PF01170 Putative RNA methylase family UPF0020 ISU60_RS12355 PF03473 MOSC domain ISU60_RS12355 PF03476 MOSC N-terminal beta barrel domain ISU60_RS12355 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_RS12360 PF07126 Cell-division protein ZapC ISU60_RS12365 PF01180 Dihydroorotate dehydrogenase ISU60_RS12370 PF01433 Peptidase family M1 domain ISU60_RS12370 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ISU60_RS12370 PF11940 Domain of unknown function (DUF3458) Ig-like fold ISU60_RS12375 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISU60_RS12375 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISU60_RS12380 PF00152 tRNA synthetases class II (D, K and N) ISU60_RS12380 PF01336 OB-fold nucleic acid binding domain ISU60_RS12385 PF00267 Gram-negative porin ISU60_RS12390 PF00155 Aminotransferase class I and II ISU60_RS12400 PF00753 Metallo-beta-lactamase superfamily ISU60_RS12405 PF05951 Bacterial protein of unknown function (DUF882) ISU60_RS12410 PF03734 L,D-transpeptidase catalytic domain ISU60_RS12410 PF01471 Putative peptidoglycan binding domain ISU60_RS12420 PF16330 MukB hinge domain ISU60_RS12420 PF04310 MukB N-terminal ISU60_RS12425 PF04288 MukE-like family ISU60_RS12430 PF17193 MukF C-terminal domain ISU60_RS12430 PF03882 MukF winged-helix domain ISU60_RS12430 PF17192 MukF middle domain ISU60_RS12435 PF13847 Methyltransferase domain ISU60_RS12440 PF01636 Phosphotransferase enzyme family ISU60_RS12445 PF02348 Cytidylyltransferase ISU60_RS12450 PF03966 Trm112p-like protein ISU60_RS12455 PF00313 'Cold-shock' DNA-binding domain ISU60_RS12460 PF07063 Domain of unknown function (DUF1338) ISU60_RS12465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISU60_RS12470 PF00664 ABC transporter transmembrane region ISU60_RS12470 PF00005 ABC transporter ISU60_RS12475 PF00753 Metallo-beta-lactamase superfamily ISU60_RS12475 PF03772 Competence protein ISU60_RS12480 PF00216 Bacterial DNA-binding protein ISU60_RS12485 PF00575 S1 RNA binding domain ISU60_RS12490 PF02224 Cytidylate kinase ISU60_RS12500 PF00266 Aminotransferase class-V ISU60_RS12510 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU60_RS12510 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS12510 PF05658 Head domain of trimeric autotransporter adhesin ISU60_RS12510 PF03895 YadA-like membrane anchor domain ISU60_RS12510 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS12510 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU60_RS12510 PF03895 YadA-like membrane anchor domain ISU60_RS12510 PF05658 Head domain of trimeric autotransporter adhesin ISU60_RS12515 PF00710 Asparaginase, N-terminal ISU60_RS12515 PF17763 Glutaminase/Asparaginase C-terminal domain ISU60_RS12520 PF18381 YcaO cyclodehydratase C-terminal domain ISU60_RS12520 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ISU60_RS12525 PF01226 Formate/nitrite transporter ISU60_RS12530 PF01228 Glycine radical ISU60_RS12530 PF02901 Pyruvate formate lyase-like ISU60_RS12540 PF04055 Radical SAM superfamily ISU60_RS12545 PF07690 Major Facilitator Superfamily ISU60_RS12550 PF02403 Seryl-tRNA synthetase N-terminal domain ISU60_RS12550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU60_RS12555 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS12555 PF16193 AAA C-terminal domain ISU60_RS12555 PF12002 MgsA AAA+ ATPase C terminal ISU60_RS12560 PF03548 Outer membrane lipoprotein carrier protein LolA ISU60_RS12565 PF09397 Ftsk gamma domain ISU60_RS12565 PF17854 FtsK alpha domain ISU60_RS12565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISU60_RS12565 PF01580 FtsK/SpoIIIE family ISU60_RS12570 PF01037 Lrp/AsnC ligand binding domain ISU60_RS12575 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS12580 PF00005 ABC transporter ISU60_RS12580 PF00664 ABC transporter transmembrane region ISU60_RS12585 PF00664 ABC transporter transmembrane region ISU60_RS12585 PF00005 ABC transporter ISU60_RS12590 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISU60_RS12595 PF01176 Translation initiation factor 1A / IF-1 ISU60_RS12605 PF17871 AAA lid domain ISU60_RS12605 PF07724 AAA domain (Cdc48 subfamily) ISU60_RS12605 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_RS12605 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS12605 PF02861 Clp amino terminal domain, pathogenicity island component ISU60_RS12610 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISU60_RS12615 PF00313 'Cold-shock' DNA-binding domain ISU60_RS12620 PF00005 ABC transporter ISU60_RS12620 PF02687 FtsX-like permease family ISU60_RS12620 PF12704 MacB-like periplasmic core domain ISU60_RS12625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS12630 PF04393 Protein of unknown function (DUF535) ISU60_RS12635 PF11398 Protein of unknown function (DUF2813) ISU60_RS12640 PF03956 Lysine exporter LysO ISU60_RS12645 PF03063 Prismane/CO dehydrogenase family ISU60_RS12650 PF00175 Oxidoreductase NAD-binding domain ISU60_RS12650 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_RS12650 PF00970 Oxidoreductase FAD-binding domain ISU60_RS12655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_RS12655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_RS12655 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_RS12665 PF01212 Beta-eliminating lyase ISU60_RS12670 PF13460 NAD(P)H-binding ISU60_RS12670 PF11066 Protein of unknown function (DUF2867) ISU60_RS12675 PF01370 NAD dependent epimerase/dehydratase family ISU60_RS12680 PF12883 Protein of unknown function (DUF3828) ISU60_RS12685 PF01817 Chorismate mutase type II ISU60_RS12690 PF00005 ABC transporter ISU60_RS12695 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS12705 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS12715 PF00892 EamA-like transporter family ISU60_RS12720 PF10100 Staphylopine dehydrogenase ISU60_RS12725 PF03059 Nicotianamine synthase protein ISU60_RS12730 PF00005 ABC transporter ISU60_RS12735 PF01032 FecCD transport family ISU60_RS12740 PF01032 FecCD transport family ISU60_RS12765 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS12770 PF05958 tRNA (Uracil-5-)-methyltransferase ISU60_RS12775 PF10767 Protein of unknown function (DUF2593) ISU60_RS12780 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS12785 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS12790 PF08402 TOBE domain ISU60_RS12790 PF00005 ABC transporter ISU60_RS12795 PF13416 Bacterial extracellular solute-binding protein ISU60_RS12800 PF10722 Putative bacterial sensory transduction regulator ISU60_RS12805 PF07214 Protein of unknown function (DUF1418) ISU60_RS12810 PF00462 Glutaredoxin ISU60_RS12815 PF06826 Predicted Permease Membrane Region ISU60_RS12815 PF02080 TrkA-C domain ISU60_RS12825 PF01569 PAP2 superfamily ISU60_RS12830 PF01791 DeoC/LacD family aldolase ISU60_RS12835 PF00455 DeoR C terminal sensor domain ISU60_RS12835 PF08220 DeoR-like helix-turn-helix domain ISU60_RS12845 PF07943 Penicillin-binding protein 5, C-terminal domain ISU60_RS12845 PF00768 D-alanyl-D-alanine carboxypeptidase ISU60_RS12850 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS12855 PF09383 NIL domain ISU60_RS12855 PF00005 ABC transporter ISU60_RS12860 PF03180 NLPA lipoprotein ISU60_RS12875 PF13417 Glutathione S-transferase, N-terminal domain ISU60_RS12875 PF00043 Glutathione S-transferase, C-terminal domain ISU60_RS12880 PF00593 TonB dependent receptor ISU60_RS12880 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS12885 PF00005 ABC transporter ISU60_RS12900 PF00324 Amino acid permease ISU60_RS12905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS12905 PF03466 LysR substrate binding domain ISU60_RS12910 PF03601 Conserved hypothetical protein 698 ISU60_RS12915 PF01261 Xylose isomerase-like TIM barrel ISU60_RS12920 PF00577 Outer membrane usher protein ISU60_RS12920 PF13954 PapC N-terminal domain ISU60_RS12920 PF13953 PapC C-terminal domain ISU60_RS12925 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS12925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS12935 PF17550 Family of unknown function ISU60_RS12940 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS12945 PF02378 Phosphotransferase system, EIIC ISU60_RS12945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_RS12950 PF00294 pfkB family carbohydrate kinase ISU60_RS12955 PF00381 PTS HPr component phosphorylation site ISU60_RS12955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_RS12960 PF00293 NUDIX domain ISU60_RS12965 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS12970 PF00005 ABC transporter ISU60_RS12980 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU60_RS12985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_RS12985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_RS12990 PF00171 Aldehyde dehydrogenase family ISU60_RS13000 PF01842 ACT domain ISU60_RS13000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_RS13000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_RS13015 PF03692 Putative zinc- or iron-chelating domain ISU60_RS13020 PF03222 Tryptophan/tyrosine permease family ISU60_RS13025 PF01132 Elongation factor P (EF-P) OB domain ISU60_RS13025 PF09285 Elongation factor P, C-terminal ISU60_RS13025 PF08207 Elongation factor P (EF-P) KOW-like domain ISU60_RS13030 PF03786 D-mannonate dehydratase (UxuA) ISU60_RS13035 PF01232 Mannitol dehydrogenase Rossmann domain ISU60_RS13035 PF08125 Mannitol dehydrogenase C-terminal domain ISU60_RS13040 PF07729 FCD domain ISU60_RS13040 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS13045 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISU60_RS13045 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU60_RS13050 PF01569 PAP2 superfamily ISU60_RS13055 PF00877 NlpC/P60 family ISU60_RS13060 PF00563 EAL domain ISU60_RS13060 PF12792 CSS motif domain associated with EAL ISU60_RS13065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_RS13070 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS13075 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_RS13075 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS13080 PF00005 ABC transporter ISU60_RS13080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_RS13085 PF13989 YejG-like protein ISU60_RS13090 PF07690 Major Facilitator Superfamily ISU60_RS13095 PF00849 RNA pseudouridylate synthase ISU60_RS13095 PF01479 S4 domain ISU60_RS13100 PF04851 Type III restriction enzyme, res subunit ISU60_RS13100 PF00271 Helicase conserved C-terminal domain ISU60_RS13105 PF01386 Ribosomal L25p family ISU60_RS13110 PF01797 Transposase IS200 like ISU60_RS13115 PF04245 37-kD nucleoid-associated bacterial protein ISU60_RS13120 PF07208 Protein of unknown function (DUF1414) ISU60_RS13125 PF11893 Domain of unknown function (DUF3413) ISU60_RS13125 PF00884 Sulfatase ISU60_RS13140 PF05638 Type VI secretion system effector, Hcp ISU60_RS13160 PF00232 Glycosyl hydrolase family 1 ISU60_RS13165 PF01418 Helix-turn-helix domain, rpiR family ISU60_RS13165 PF01380 SIS domain ISU60_RS13170 PF07484 Phage Tail Collar Domain ISU60_RS13185 PF04865 Baseplate J-like protein ISU60_RS13225 PF17482 Phage tail sheath C-terminal domain ISU60_RS13225 PF04984 Phage tail sheath protein subtilisin-like domain ISU60_RS13245 PF01261 Xylose isomerase-like TIM barrel ISU60_RS13250 PF08220 DeoR-like helix-turn-helix domain ISU60_RS13250 PF00455 DeoR C terminal sensor domain ISU60_RS13260 PF07005 Sugar-binding N-terminal domain ISU60_RS13260 PF17042 Nucleotide-binding C-terminal domain ISU60_RS13265 PF06530 Phage antitermination protein Q ISU60_RS13270 PF01381 Helix-turn-helix ISU60_RS13270 PF00717 Peptidase S24-like ISU60_RS13275 PF06183 DinI-like family ISU60_RS13280 PF01278 Omptin family ISU60_RS13285 PF02743 Cache domain ISU60_RS13285 PF00672 HAMP domain ISU60_RS13285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_RS13290 PF12706 Beta-lactamase superfamily domain ISU60_RS13300 PF00144 Beta-lactamase ISU60_RS13320 PF00267 Gram-negative porin ISU60_RS13325 PF07690 Major Facilitator Superfamily ISU60_RS13330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS13330 PF16359 RcsD-ABL domain ISU60_RS13330 PF01627 Hpt domain ISU60_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS13335 PF01627 Hpt domain ISU60_RS13335 PF16359 RcsD-ABL domain ISU60_RS13340 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS13340 PF00072 Response regulator receiver domain ISU60_RS13345 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS13345 PF09456 RcsC Alpha-Beta-Loop (ABL) ISU60_RS13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS13345 PF00072 Response regulator receiver domain ISU60_RS13350 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU60_RS13350 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU60_RS13360 PF00317 Ribonucleotide reductase, all-alpha domain ISU60_RS13360 PF03477 ATP cone domain ISU60_RS13360 PF02867 Ribonucleotide reductase, barrel domain ISU60_RS13365 PF00268 Ribonucleotide reductase, small chain ISU60_RS13370 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU60_RS13375 PF03974 Ecotin ISU60_RS13380 PF00994 Probable molybdopterin binding domain ISU60_RS13385 PF03222 Tryptophan/tyrosine permease family ISU60_RS13390 PF07437 YfaZ precursor ISU60_RS13395 PF06628 Catalase-related immune-responsive ISU60_RS13395 PF00199 Catalase ISU60_RS13400 PF13307 Helicase C-terminal domain ISU60_RS13400 PF06733 DEAD_2 ISU60_RS13405 PF00267 Gram-negative porin ISU60_RS13410 PF00892 EamA-like transporter family ISU60_RS13420 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU60_RS13420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU60_RS13420 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU60_RS13425 PF13520 Amino acid permease ISU60_RS13430 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS13435 PF00005 ABC transporter ISU60_RS13440 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS13450 PF00581 Rhodanese-like domain ISU60_RS13465 PF00005 ABC transporter ISU60_RS13470 PF00005 ABC transporter ISU60_RS13475 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS13480 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS13485 PF02954 Bacterial regulatory protein, Fis family ISU60_RS13485 PF00158 Sigma-54 interaction domain ISU60_RS13485 PF13188 PAS domain ISU60_RS13490 PF07308 Protein of unknown function (DUF1456) ISU60_RS13495 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS13500 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS13510 PF00005 ABC transporter ISU60_RS13515 PF04226 Transglycosylase associated protein ISU60_RS13525 PF01844 HNH endonuclease ISU60_RS13530 PF01928 CYTH domain ISU60_RS13535 PF09330 D-lactate dehydrogenase, membrane binding ISU60_RS13535 PF01565 FAD binding domain ISU60_RS13540 PF00768 D-alanyl-D-alanine carboxypeptidase ISU60_RS13550 PF01207 Dihydrouridine synthase (Dus) ISU60_RS13575 PF00872 Transposase, Mutator family ISU60_RS13610 PF00271 Helicase conserved C-terminal domain ISU60_RS13610 PF00270 DEAD/DEAH box helicase ISU60_RS13615 PF09209 Tetracyclin repressor-like, C-terminal domain ISU60_RS13615 PF00440 Bacterial regulatory proteins, tetR family ISU60_RS13620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS13625 PF00005 ABC transporter ISU60_RS13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS13650 PF03466 LysR substrate binding domain ISU60_RS13655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU60_RS13660 PF00158 Sigma-54 interaction domain ISU60_RS13660 PF00072 Response regulator receiver domain ISU60_RS13660 PF02954 Bacterial regulatory protein, Fis family ISU60_RS13665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS13665 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS13670 PF13801 Heavy-metal resistance ISU60_RS13685 PF01027 Inhibitor of apoptosis-promoting Bax1 ISU60_RS13690 PF02391 MoaE protein ISU60_RS13695 PF02597 ThiS family ISU60_RS13700 PF01967 MoaC family ISU60_RS13705 PF04055 Radical SAM superfamily ISU60_RS13705 PF06463 Molybdenum Cofactor Synthesis C ISU60_RS13710 PF01933 Uncharacterised protein family UPF0052 ISU60_RS13715 PF09905 DNA-binding protein VF530 ISU60_RS13720 PF04851 Type III restriction enzyme, res subunit ISU60_RS13720 PF02151 UvrB/uvrC motif ISU60_RS13720 PF12344 Ultra-violet resistance protein B ISU60_RS13720 PF00271 Helicase conserved C-terminal domain ISU60_RS13720 PF17757 UvrB interaction domain ISU60_RS13725 PF00005 ABC transporter ISU60_RS13725 PF09383 NIL domain ISU60_RS13735 PF08241 Methyltransferase domain ISU60_RS13740 PF00155 Aminotransferase class I and II ISU60_RS13745 PF04055 Radical SAM superfamily ISU60_RS13745 PF06968 Biotin and Thiamin Synthesis associated domain ISU60_RS13750 PF00202 Aminotransferase class-III ISU60_RS13755 PF10282 Lactonase, 7-bladed beta-propeller ISU60_RS13765 PF03459 TOBE domain ISU60_RS13765 PF00005 ABC transporter ISU60_RS13770 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS13780 PF10766 Multidrug efflux pump-associated protein AcrZ ISU60_RS13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS13785 PF03459 TOBE domain ISU60_RS13790 PF00005 ABC transporter ISU60_RS13800 PF16363 GDP-mannose 4,6 dehydratase ISU60_RS13805 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ISU60_RS13805 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ISU60_RS13810 PF00288 GHMP kinases N terminal domain ISU60_RS13810 PF10509 Galactokinase galactose-binding signature ISU60_RS13810 PF08544 GHMP kinases C terminal ISU60_RS13820 PF01263 Aldose 1-epimerase ISU60_RS13830 PF00300 Histidine phosphatase superfamily (branch 1) ISU60_RS13835 PF00793 DAHP synthetase I family ISU60_RS13840 PF01545 Cation efflux family ISU60_RS13845 PF04973 Nicotinamide mononucleotide transporter ISU60_RS13850 PF02445 Quinolinate synthetase A protein ISU60_RS13870 PF16331 TolA binding protein trimerisation ISU60_RS13870 PF13174 Tetratricopeptide repeat ISU60_RS13875 PF00691 OmpA family ISU60_RS13880 PF07676 WD40-like Beta Propeller Repeat ISU60_RS13880 PF04052 TolB amino-terminal domain ISU60_RS13885 PF06519 TolA C-terminal ISU60_RS13885 PF06519 TolA C-terminal ISU60_RS13890 PF02472 Biopolymer transport protein ExbD/TolR ISU60_RS13895 PF01618 MotA/TolQ/ExbB proton channel family ISU60_RS13900 PF03061 Thioesterase superfamily ISU60_RS13905 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ISU60_RS13910 PF08173 Membrane bound YbgT-like protein ISU60_RS13915 PF02322 Cytochrome bd terminal oxidase subunit II ISU60_RS13920 PF01654 Cytochrome bd terminal oxidase subunit I ISU60_RS13925 PF00549 CoA-ligase ISU60_RS13925 PF02629 CoA binding domain ISU60_RS13930 PF00549 CoA-ligase ISU60_RS13930 PF08442 ATP-grasp domain ISU60_RS13935 PF02817 e3 binding domain ISU60_RS13935 PF00364 Biotin-requiring enzyme ISU60_RS13935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU60_RS13945 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU60_RS13950 PF02910 Fumarate reductase flavoprotein C-term ISU60_RS13950 PF00890 FAD binding domain ISU60_RS13955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU60_RS13960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU60_RS13965 PF00285 Citrate synthase, C-terminal domain ISU60_RS13970 PF01025 GrpE ISU60_RS13975 PF01513 ATP-NAD kinase ISU60_RS13980 PF02463 RecF/RecN/SMC N terminal domain ISU60_RS13985 PF04355 SmpA / OmlA family ISU60_RS13990 PF03658 RnfH family Ubiquitin ISU60_RS13995 PF03364 Polyketide cyclase / dehydrase and lipid transport ISU60_RS14000 PF01668 SmpB protein ISU60_RS14015 PF00589 Phage integrase family ISU60_RS14015 PF13356 Arm DNA-binding domain ISU60_RS14065 PF05973 Phage derived protein Gp49-like (DUF891) ISU60_RS14075 PF02796 Helix-turn-helix domain of resolvase ISU60_RS14075 PF00665 Integrase core domain ISU60_RS14080 PF01695 IstB-like ATP binding protein ISU60_RS14085 PF08242 Methyltransferase domain ISU60_RS14085 PF00501 AMP-binding enzyme ISU60_RS14085 PF00668 Condensation domain ISU60_RS14085 PF00550 Phosphopantetheine attachment site ISU60_RS14090 PF00668 Condensation domain ISU60_RS14090 PF00501 AMP-binding enzyme ISU60_RS14090 PF13193 AMP-binding enzyme C-terminal domain ISU60_RS14095 PF00550 Phosphopantetheine attachment site ISU60_RS14095 PF08242 Methyltransferase domain ISU60_RS14095 PF00668 Condensation domain ISU60_RS14095 PF00501 AMP-binding enzyme ISU60_RS14110 PF00975 Thioesterase domain ISU60_RS14120 PF04954 Siderophore-interacting protein ISU60_RS14120 PF08021 Siderophore-interacting FAD-binding domain ISU60_RS14120 PF00005 ABC transporter ISU60_RS14120 PF00664 ABC transporter transmembrane region ISU60_RS14125 PF00664 ABC transporter transmembrane region ISU60_RS14125 PF00005 ABC transporter ISU60_RS14140 PF02447 GntP family permease ISU60_RS14150 PF12951 Passenger-associated-transport-repeat ISU60_RS14155 PF04717 Type VI secretion system, phage-baseplate injector ISU60_RS14165 PF05593 RHS Repeat ISU60_RS14165 PF03527 RHS protein ISU60_RS14180 PF00939 Sodium:sulfate symporter transmembrane region ISU60_RS14185 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS14205 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS14205 PF00593 TonB dependent receptor ISU60_RS14210 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU60_RS14215 PF04183 IucA / IucC family ISU60_RS14215 PF06276 Ferric iron reductase FhuF-like transporter ISU60_RS14250 PF03472 Autoinducer binding domain ISU60_RS14250 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS14255 PF00765 Autoinducer synthase ISU60_RS14260 PF02517 CPBP intramembrane metalloprotease ISU60_RS14280 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_RS14295 PF05736 OprF membrane domain ISU60_RS14295 PF00691 OmpA family ISU60_RS14305 PF17871 AAA lid domain ISU60_RS14305 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_RS14305 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS14305 PF07724 AAA domain (Cdc48 subfamily) ISU60_RS14310 PF13296 Putative type VI secretion system Rhs element Vgr ISU60_RS14310 PF04717 Type VI secretion system, phage-baseplate injector ISU60_RS14310 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU60_RS14370 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU60_RS14370 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU60_RS14370 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU60_RS14375 PF13407 Periplasmic binding protein domain ISU60_RS14380 PF00005 ABC transporter ISU60_RS14385 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS14390 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS14400 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISU60_RS14400 PF01464 Transglycosylase SLT domain ISU60_RS14405 PF04362 Bacterial Fe(2+) trafficking ISU60_RS14410 PF10576 Iron-sulfur binding domain of endonuclease III ISU60_RS14410 PF00633 Helix-hairpin-helix motif ISU60_RS14410 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU60_RS14410 PF14815 NUDIX domain ISU60_RS14415 PF02390 Putative methyltransferase ISU60_RS14420 PF04320 Protein with unknown function (DUF469) ISU60_RS14425 PF04960 Glutaminase ISU60_RS14430 PF11101 Protein of unknown function (DUF2884) ISU60_RS14435 PF11101 Protein of unknown function (DUF2884) ISU60_RS14440 PF11647 Membrane Localization Domain ISU60_RS14440 PF11713 Peptidase C80 family ISU60_RS14440 PF07634 RtxA repeat ISU60_RS14440 PF16671 Actin cross-linking domain ISU60_RS14440 PF12146 Serine aminopeptidase, S33 ISU60_RS14445 PF04055 Radical SAM superfamily ISU60_RS14445 PF06969 HemN C-terminal domain ISU60_RS14450 PF01725 Ham1 family ISU60_RS14455 PF02594 Uncharacterised ACR, YggU family COG1872 ISU60_RS14460 PF02325 YGGT family ISU60_RS14465 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISU60_RS14465 PF03807 NADP oxidoreductase coenzyme F420-dependent ISU60_RS14470 PF01168 Alanine racemase, N-terminal domain ISU60_RS14475 PF00437 Type II/IV secretion system protein ISU60_RS14480 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISU60_RS14485 PF00795 Carbon-nitrogen hydrolase ISU60_RS14490 PF03652 Holliday junction resolvase ISU60_RS14495 PF02622 Uncharacterized ACR, COG1678 ISU60_RS14500 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISU60_RS14500 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISU60_RS14505 PF04452 RNA methyltransferase ISU60_RS14510 PF04231 Endonuclease I ISU60_RS14515 PF17283 SprT-like zinc ribbon domain ISU60_RS14515 PF10263 SprT-like family ISU60_RS14520 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISU60_RS14520 PF02772 S-adenosylmethionine synthetase, central domain ISU60_RS14520 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISU60_RS14525 PF17810 Arginine decarboxylase helical bundle domain ISU60_RS14525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU60_RS14525 PF17944 Arginine decarboxylase C-terminal helical extension ISU60_RS14540 PF01435 Peptidase family M48 ISU60_RS14545 PF00456 Transketolase, thiamine diphosphate binding domain ISU60_RS14545 PF02780 Transketolase, C-terminal domain ISU60_RS14545 PF02779 Transketolase, pyrimidine binding domain ISU60_RS14555 PF02796 Helix-turn-helix domain of resolvase ISU60_RS14555 PF00665 Integrase core domain ISU60_RS14560 PF01695 IstB-like ATP binding protein ISU60_RS14570 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU60_RS14570 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU60_RS14575 PF00162 Phosphoglycerate kinase ISU60_RS14580 PF01116 Fructose-bisphosphate aldolase class-II ISU60_RS14590 PF00924 Mechanosensitive ion channel ISU60_RS14590 PF05552 Conserved TM helix ISU60_RS14595 PF01810 LysE type translocator ISU60_RS14600 PF04402 Protein of unknown function (DUF541) ISU60_RS14605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS14605 PF03466 LysR substrate binding domain ISU60_RS14610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU60_RS14615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU60_RS14615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU60_RS14615 PF01842 ACT domain ISU60_RS14625 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISU60_RS14635 PF05164 Cell division protein ZapA ISU60_RS14640 PF03695 Uncharacterised protein family (UPF0149) ISU60_RS14645 PF00557 Metallopeptidase family M24 ISU60_RS14645 PF05195 Aminopeptidase P, N-terminal domain ISU60_RS14650 PF01494 FAD binding domain ISU60_RS14655 PF01494 FAD binding domain ISU60_RS14660 PF01571 Aminomethyltransferase folate-binding domain ISU60_RS14660 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISU60_RS14665 PF01597 Glycine cleavage H-protein ISU60_RS14670 PF02347 Glycine cleavage system P-protein ISU60_RS14700 PF03006 Haemolysin-III related ISU60_RS14710 PF01571 Aminomethyltransferase folate-binding domain ISU60_RS14715 PF03937 Flavinator of succinate dehydrogenase ISU60_RS14720 PF07254 Membrane-bound toxin component of toxin-antitoxin system ISU60_RS14725 PF00072 Response regulator receiver domain ISU60_RS14725 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS14730 PF00672 HAMP domain ISU60_RS14730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS14730 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS14735 PF06123 Inner membrane protein CreD ISU60_RS14740 PF00258 Flavodoxin ISU60_RS14745 PF02899 Phage integrase, N-terminal SAM-like domain ISU60_RS14745 PF00589 Phage integrase family ISU60_RS14750 PF10411 Disulfide bond isomerase protein N-terminus ISU60_RS14750 PF13098 Thioredoxin-like domain ISU60_RS14755 PF01368 DHH family ISU60_RS14755 PF02272 DHHA1 domain ISU60_RS14755 PF17768 RecJ OB domain ISU60_RS14765 PF00152 tRNA synthetases class II (D, K and N) ISU60_RS14765 PF01336 OB-fold nucleic acid binding domain ISU60_RS14775 PF13356 Arm DNA-binding domain ISU60_RS14775 PF00589 Phage integrase family ISU60_RS14775 PF14659 Phage integrase, N-terminal SAM-like domain ISU60_RS14795 PF15723 Motility quorum-sensing regulator, toxin of MqsA ISU60_RS14800 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ISU60_RS14890 PF03551 Transcriptional regulator PadR-like family ISU60_RS14895 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU60_RS14905 PF13407 Periplasmic binding protein domain ISU60_RS14910 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS14915 PF00005 ABC transporter ISU60_RS14920 PF17912 MalK OB fold domain ISU60_RS14920 PF00005 ABC transporter ISU60_RS14925 PF13416 Bacterial extracellular solute-binding protein ISU60_RS14930 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS14935 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS14940 PF07745 Glycosyl hydrolase family 53 ISU60_RS14945 PF02449 Beta-galactosidase ISU60_RS14945 PF08532 Beta-galactosidase trimerisation domain ISU60_RS14945 PF08533 Beta-galactosidase C-terminal domain ISU60_RS14950 PF00367 phosphotransferase system, EIIB ISU60_RS14950 PF02378 Phosphotransferase system, EIIC ISU60_RS14955 PF02264 LamB porin ISU60_RS14960 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS14965 PF13802 Galactose mutarotase-like ISU60_RS14965 PF16338 Domain of unknown function (DUF4968) ISU60_RS14965 PF17137 Domain of unknown function (DUF5110) ISU60_RS14965 PF01055 Glycosyl hydrolases family 31 ISU60_RS14970 PF07690 Major Facilitator Superfamily ISU60_RS14975 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS14985 PF01116 Fructose-bisphosphate aldolase class-II ISU60_RS14995 PF00884 Sulfatase ISU60_RS15000 PF04055 Radical SAM superfamily ISU60_RS15000 PF13186 Iron-sulfur cluster-binding domain ISU60_RS15005 PF07470 Glycosyl Hydrolase Family 88 ISU60_RS15015 PF01979 Amidohydrolase family ISU60_RS15020 PF03610 PTS system fructose IIA component ISU60_RS15025 PF03613 PTS system mannose/fructose/sorbose family IID component ISU60_RS15030 PF03609 PTS system sorbose-specific iic component ISU60_RS15035 PF03830 PTS system sorbose subfamily IIB component ISU60_RS15040 PF01380 SIS domain ISU60_RS15045 PF08013 Tagatose 6 phosphate kinase ISU60_RS15050 PF00455 DeoR C terminal sensor domain ISU60_RS15050 PF08220 DeoR-like helix-turn-helix domain ISU60_RS15055 PF00884 Sulfatase ISU60_RS15060 PF01797 Transposase IS200 like ISU60_RS15065 PF02796 Helix-turn-helix domain of resolvase ISU60_RS15065 PF00665 Integrase core domain ISU60_RS15070 PF01695 IstB-like ATP binding protein ISU60_RS15085 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ISU60_RS15095 PF00929 Exonuclease ISU60_RS15100 PF00075 RNase H ISU60_RS15105 PF08241 Methyltransferase domain ISU60_RS15110 PF00753 Metallo-beta-lactamase superfamily ISU60_RS15110 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISU60_RS15115 PF01464 Transglycosylase SLT domain ISU60_RS15115 PF01476 LysM domain ISU60_RS15120 PF03372 Endonuclease/Exonuclease/phosphatase family ISU60_RS15130 PF00248 Aldo/keto reductase family ISU60_RS15165 PF09383 NIL domain ISU60_RS15165 PF00005 ABC transporter ISU60_RS15170 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS15175 PF03180 NLPA lipoprotein ISU60_RS15180 PF16358 RcsF lipoprotein ISU60_RS15185 PF01980 tRNA-methyltransferase O ISU60_RS15185 PF18389 TrmO C-terminal domain ISU60_RS15190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU60_RS15190 PF04073 Aminoacyl-tRNA editing domain ISU60_RS15190 PF03129 Anticodon binding domain ISU60_RS15195 PF17185 NlpE C-terminal OB domain ISU60_RS15195 PF04170 NlpE N-terminal domain ISU60_RS15200 PF00472 RF-1 domain ISU60_RS15205 PF07152 YaeQ protein ISU60_RS15210 PF06786 Uncharacterised protein family (UPF0253) ISU60_RS15215 PF07073 Modulator of Rho-dependent transcription termination (ROF) ISU60_RS15220 PF00034 Cytochrome c ISU60_RS15225 PF01171 PP-loop family ISU60_RS15225 PF09179 TilS substrate binding domain ISU60_RS15225 PF11734 TilS substrate C-terminal domain ISU60_RS15230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU60_RS15235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISU60_RS15240 PF01336 OB-fold nucleic acid binding domain ISU60_RS15240 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISU60_RS15240 PF14579 Helix-hairpin-helix motif ISU60_RS15240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISU60_RS15240 PF02811 PHP domain ISU60_RS15245 PF01351 Ribonuclease HII ISU60_RS15250 PF02684 Lipid-A-disaccharide synthetase ISU60_RS15255 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISU60_RS15255 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_RS15260 PF07977 FabA-like domain ISU60_RS15265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISU60_RS15265 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_RS15270 PF03938 Outer membrane protein (OmpH-like) ISU60_RS15275 PF01103 Surface antigen ISU60_RS15275 PF07244 Surface antigen variable number repeat ISU60_RS15280 PF02163 Peptidase family M50 ISU60_RS15280 PF17820 PDZ domain ISU60_RS15290 PF01255 Putative undecaprenyl diphosphate synthase ISU60_RS15295 PF13288 DXP reductoisomerase C-terminal domain ISU60_RS15295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU60_RS15295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISU60_RS15300 PF01765 Ribosome recycling factor ISU60_RS15305 PF00696 Amino acid kinase family ISU60_RS15310 PF00889 Elongation factor TS ISU60_RS15315 PF00318 Ribosomal protein S2 ISU60_RS15320 PF00557 Metallopeptidase family M24 ISU60_RS15325 PF08335 GlnD PII-uridylyltransferase ISU60_RS15325 PF01966 HD domain ISU60_RS15325 PF01842 ACT domain ISU60_RS15325 PF01909 Nucleotidyltransferase domain ISU60_RS15330 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_RS15330 PF14602 Hexapeptide repeat of succinyl-transferase ISU60_RS15330 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISU60_RS15335 PF11944 Protein of unknown function (DUF3461) ISU60_RS15340 PF00258 Flavodoxin ISU60_RS15345 PF00849 RNA pseudouridylate synthase ISU60_RS15350 PF04287 tRNA pseudouridine synthase C ISU60_RS15355 PF01797 Transposase IS200 like ISU60_RS15360 PF07348 Syd protein (SUKH-2) ISU60_RS15365 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISU60_RS15365 PF14489 QueF-like protein ISU60_RS15370 PF03641 Possible lysine decarboxylase ISU60_RS15370 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISU60_RS15370 PF11892 Domain of unknown function (DUF3412) ISU60_RS15375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU60_RS15375 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU60_RS15380 PF18125 RlmM ferredoxin-like domain ISU60_RS15380 PF01728 FtsJ-like methyltransferase ISU60_RS15385 PF04241 Protein of unknown function (DUF423) ISU60_RS15390 PF03466 LysR substrate binding domain ISU60_RS15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS15400 PF00266 Aminotransferase class-V ISU60_RS15405 PF02657 Fe-S metabolism associated domain ISU60_RS15410 PF00899 ThiF family ISU60_RS15415 PF06725 3D domain ISU60_RS15415 PF03562 MltA specific insert domain ISU60_RS15430 PF01520 N-acetylmuramoyl-L-alanine amidase ISU60_RS15430 PF11741 AMIN domain ISU60_RS15435 PF00583 Acetyltransferase (GNAT) family ISU60_RS15435 PF00696 Amino acid kinase family ISU60_RS15440 PF13538 UvrD-like helicase C-terminal domain ISU60_RS15445 PF12705 PD-(D/E)XK nuclease superfamily ISU60_RS15445 PF00580 UvrD/REP helicase N-terminal domain ISU60_RS15445 PF13361 UvrD-like helicase C-terminal domain ISU60_RS15450 PF00675 Insulinase (Peptidase family M16) ISU60_RS15450 PF05193 Peptidase M16 inactive domain ISU60_RS15450 PF16187 Middle or third domain of peptidase_M16 ISU60_RS15455 PF17946 RecC C-terminal domain ISU60_RS15480 PF00303 Thymidylate synthase ISU60_RS15485 PF01790 Prolipoprotein diacylglyceryl transferase ISU60_RS15490 PF05524 PEP-utilising enzyme, N-terminal ISU60_RS15490 PF01590 GAF domain ISU60_RS15490 PF00391 PEP-utilising enzyme, mobile domain ISU60_RS15490 PF02896 PEP-utilising enzyme, TIM barrel domain ISU60_RS15495 PF00293 NUDIX domain ISU60_RS15500 PF02976 DNA mismatch repair enzyme MutH ISU60_RS15505 PF00248 Aldo/keto reductase family ISU60_RS15520 PF07690 Major Facilitator Superfamily ISU60_RS15525 PF13193 AMP-binding enzyme C-terminal domain ISU60_RS15525 PF00501 AMP-binding enzyme ISU60_RS15525 PF01553 Acyltransferase ISU60_RS15530 PF01568 Molydopterin dinucleotide binding domain ISU60_RS15530 PF00384 Molybdopterin oxidoreductase ISU60_RS15535 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS15540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU60_RS15540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISU60_RS15545 PF03466 LysR substrate binding domain ISU60_RS15545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS15550 PF07690 Major Facilitator Superfamily ISU60_RS15555 PF03466 LysR substrate binding domain ISU60_RS15555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS15570 PF02203 Tar ligand binding domain homologue ISU60_RS15570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU60_RS15570 PF00672 HAMP domain ISU60_RS15590 PF06750 Bacterial Peptidase A24 N-terminal domain ISU60_RS15590 PF01478 Type IV leader peptidase family ISU60_RS15610 PF11612 Type II secretion system (T2SS), protein J ISU60_RS15610 PF07963 Prokaryotic N-terminal methylation motif ISU60_RS15615 PF02501 Type II secretion system (T2SS), protein I ISU60_RS15615 PF07963 Prokaryotic N-terminal methylation motif ISU60_RS15625 PF08334 Type II secretion system (T2SS), protein G ISU60_RS15625 PF07963 Prokaryotic N-terminal methylation motif ISU60_RS15635 PF00437 Type II/IV secretion system protein ISU60_RS15640 PF00263 Bacterial type II and III secretion system protein ISU60_RS15640 PF03958 Bacterial type II/III secretion system short domain ISU60_RS15655 PF00484 Carbonic anhydrase ISU60_RS15675 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ISU60_RS15675 PF09092 Lyase, N terminal ISU60_RS15675 PF02278 Polysaccharide lyase family 8, super-sandwich domain ISU60_RS15675 PF09093 Lyase, catalytic ISU60_RS15680 PF01695 IstB-like ATP binding protein ISU60_RS15685 PF02796 Helix-turn-helix domain of resolvase ISU60_RS15685 PF00665 Integrase core domain ISU60_RS15695 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS15695 PF00593 TonB dependent receptor ISU60_RS15700 PF01546 Peptidase family M20/M25/M40 ISU60_RS15700 PF07687 Peptidase dimerisation domain ISU60_RS15705 PF03806 AbgT putative transporter family ISU60_RS15710 PF12468 Type III secretion system leucine rich repeat protein ISU60_RS15710 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU60_RS15715 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU60_RS15715 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU60_RS15715 PF12468 Type III secretion system leucine rich repeat protein ISU60_RS15715 PF12468 Type III secretion system leucine rich repeat protein ISU60_RS15725 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU60_RS15725 PF12468 Type III secretion system leucine rich repeat protein ISU60_RS15730 PF03797 Autotransporter beta-domain ISU60_RS15740 PF07906 ShET2 enterotoxin, N-terminal region ISU60_RS15745 PF00873 AcrB/AcrD/AcrF family ISU60_RS15750 PF00529 HlyD membrane-fusion protein of T1SS ISU60_RS15750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS15760 PF08448 PAS fold ISU60_RS15760 PF00990 Diguanylate cyclase, GGDEF domain ISU60_RS15760 PF08447 PAS fold ISU60_RS15760 PF00563 EAL domain ISU60_RS15795 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU60_RS15795 PF00691 OmpA family ISU60_RS15800 PF01618 MotA/TolQ/ExbB proton channel family ISU60_RS15805 PF04542 Sigma-70 region 2 ISU60_RS15805 PF04545 Sigma-70, region 4 ISU60_RS15830 PF07195 Flagellar hook-associated protein 2 C-terminus ISU60_RS15830 PF02465 Flagellar hook-associated protein 2 N-terminus ISU60_RS15830 PF07196 Flagellin hook IN motif ISU60_RS15835 PF00700 Bacterial flagellin C-terminal helical region ISU60_RS15835 PF00669 Bacterial flagellin N-terminal helical region ISU60_RS15840 PF00669 Bacterial flagellin N-terminal helical region ISU60_RS15840 PF00700 Bacterial flagellin C-terminal helical region ISU60_RS15845 PF00700 Bacterial flagellin C-terminal helical region ISU60_RS15845 PF00669 Bacterial flagellin N-terminal helical region ISU60_RS15850 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS15850 PF18500 CadC C-terminal domain 1 ISU60_RS15870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_RS15870 PF00460 Flagella basal body rod protein ISU60_RS15880 PF02119 Flagellar P-ring protein ISU60_RS15885 PF02107 Flagellar L-ring protein ISU60_RS15890 PF00460 Flagella basal body rod protein ISU60_RS15890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_RS15895 PF00460 Flagella basal body rod protein ISU60_RS15895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_RS15900 PF00460 Flagella basal body rod protein ISU60_RS15900 PF07559 Flagellar basal body protein FlaE ISU60_RS15900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_RS15905 PF03963 Flagellar hook capping protein - N-terminal region ISU60_RS15905 PF13860 FlgD Ig-like domain ISU60_RS15905 PF13861 FlgD Tudor-like domain ISU60_RS15910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU60_RS15910 PF00460 Flagella basal body rod protein ISU60_RS15915 PF00460 Flagella basal body rod protein ISU60_RS15920 PF13144 Chaperone for flagella basal body P-ring formation ISU60_RS15940 PF18269 T3SS EscN ATPase C-terminal domain ISU60_RS15940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_RS15955 PF01514 Secretory protein of YscJ/FliF family ISU60_RS15955 PF08345 Flagellar M-ring protein C-terminal ISU60_RS15960 PF02049 Flagellar hook-basal body complex protein FliE ISU60_RS15965 PF00072 Response regulator receiver domain ISU60_RS15965 PF00158 Sigma-54 interaction domain ISU60_RS15965 PF02954 Bacterial regulatory protein, Fis family ISU60_RS15975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU60_RS15980 PF00813 FliP family ISU60_RS15985 PF01313 Bacterial export proteins, family 3 ISU60_RS15990 PF01311 Bacterial export proteins, family 1 ISU60_RS15995 PF01312 FlhB HrpN YscU SpaS Family ISU60_RS16000 PF00771 FHIPEP family ISU60_RS16015 PF01497 Periplasmic binding protein ISU60_RS16020 PF00419 Fimbrial protein ISU60_RS16020 PF09222 Fimbrial adhesin F17-AG, lectin domain ISU60_RS16025 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS16025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS16030 PF00577 Outer membrane usher protein ISU60_RS16030 PF13954 PapC N-terminal domain ISU60_RS16030 PF13953 PapC C-terminal domain ISU60_RS16050 PF13629 Pilus formation protein N terminal region ISU60_RS16050 PF04972 BON domain ISU60_RS16050 PF00263 Bacterial type II and III secretion system protein ISU60_RS16055 PF13629 Pilus formation protein N terminal region ISU60_RS16055 PF00263 Bacterial type II and III secretion system protein ISU60_RS16055 PF04972 BON domain ISU60_RS16070 PF00437 Type II/IV secretion system protein ISU60_RS16105 PF02472 Biopolymer transport protein ExbD/TolR ISU60_RS16110 PF01618 MotA/TolQ/ExbB proton channel family ISU60_RS16115 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU60_RS16120 PF09335 SNARE associated Golgi protein ISU60_RS16125 PF12833 Helix-turn-helix domain ISU60_RS16125 PF06719 AraC-type transcriptional regulator N-terminus ISU60_RS16130 PF00465 Iron-containing alcohol dehydrogenase ISU60_RS16140 PF00248 Aldo/keto reductase family ISU60_RS16150 PF07731 Multicopper oxidase ISU60_RS16150 PF07732 Multicopper oxidase ISU60_RS16155 PF01553 Acyltransferase ISU60_RS16160 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU60_RS16160 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU60_RS16170 PF02525 Flavodoxin-like fold ISU60_RS16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS16175 PF03466 LysR substrate binding domain ISU60_RS16180 PF00986 DNA gyrase B subunit, carboxyl terminus ISU60_RS16180 PF01751 Toprim domain ISU60_RS16180 PF00204 DNA gyrase B ISU60_RS16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS16185 PF05728 Uncharacterised protein family (UPF0227) ISU60_RS16190 PF00149 Calcineurin-like phosphoesterase ISU60_RS16195 PF06853 Protein of unknown function (DUF1249) ISU60_RS16200 PF00293 NUDIX domain ISU60_RS16205 PF02321 Outer membrane efflux protein ISU60_RS16210 PF06693 Protein of unknown function (DUF1190) ISU60_RS16215 PF03738 Glutathionylspermidine synthase preATP-grasp ISU60_RS16220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU60_RS16225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISU60_RS16230 PF04380 Membrane fusogenic activity ISU60_RS16240 PF13520 Amino acid permease ISU60_RS16245 PF00294 pfkB family carbohydrate kinase ISU60_RS16245 PF01467 Cytidylyltransferase-like ISU60_RS16250 PF03710 Glutamate-ammonia ligase adenylyltransferase ISU60_RS16250 PF08335 GlnD PII-uridylyltransferase ISU60_RS16255 PF01928 CYTH domain ISU60_RS16260 PF08239 Bacterial SH3 domain ISU60_RS16265 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU60_RS16265 PF01743 Poly A polymerase head domain ISU60_RS16265 PF01966 HD domain ISU60_RS16270 PF02673 Bacitracin resistance protein BacA ISU60_RS16275 PF02152 Dihydroneopterin aldolase ISU60_RS16280 PF02660 Glycerol-3-phosphate acyltransferase ISU60_RS16285 PF00814 Glycoprotease family ISU60_RS16290 PF01165 Ribosomal protein S21 ISU60_RS16295 PF08275 DNA primase catalytic core, N-terminal domain ISU60_RS16295 PF08278 DNA primase DnaG DnaB-binding ISU60_RS16295 PF01807 CHC2 zinc finger ISU60_RS16295 PF10410 DnaB-helicase binding domain of primase ISU60_RS16300 PF04546 Sigma-70, non-essential region ISU60_RS16300 PF04545 Sigma-70, region 4 ISU60_RS16300 PF04542 Sigma-70 region 2 ISU60_RS16300 PF03979 Sigma-70 factor, region 1.1 ISU60_RS16300 PF04539 Sigma-70 region 3 ISU60_RS16300 PF00140 Sigma-70 factor, region 1.2 ISU60_RS16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS16345 PF03466 LysR substrate binding domain ISU60_RS16365 PF01042 Endoribonuclease L-PSP ISU60_RS16385 PF00155 Aminotransferase class I and II ISU60_RS16400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS16400 PF00529 HlyD membrane-fusion protein of T1SS ISU60_RS16405 PF04632 Fusaric acid resistance protein family ISU60_RS16415 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU60_RS16415 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU60_RS16415 PF14310 Fibronectin type III-like domain ISU60_RS16425 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS16430 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS16435 PF01547 Bacterial extracellular solute-binding protein ISU60_RS16440 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS16445 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISU60_RS16450 PF17912 MalK OB fold domain ISU60_RS16450 PF00005 ABC transporter ISU60_RS16450 PF03459 TOBE domain ISU60_RS16470 PF04829 Pre-toxin domain with VENN motif ISU60_RS16470 PF05860 haemagglutination activity domain ISU60_RS16470 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS16470 PF13332 Hemagglutinin repeat ISU60_RS16475 PF04829 Pre-toxin domain with VENN motif ISU60_RS16475 PF05860 haemagglutination activity domain ISU60_RS16475 PF13332 Hemagglutinin repeat ISU60_RS16475 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS16490 PF13332 Hemagglutinin repeat ISU60_RS16490 PF04829 Pre-toxin domain with VENN motif ISU60_RS16495 PF04829 Pre-toxin domain with VENN motif ISU60_RS16495 PF13332 Hemagglutinin repeat ISU60_RS16505 PF05860 haemagglutination activity domain ISU60_RS16505 PF04829 Pre-toxin domain with VENN motif ISU60_RS16505 PF13332 Hemagglutinin repeat ISU60_RS16505 PF13018 Extended Signal Peptide of Type V secretion system ISU60_RS16510 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU60_RS16510 PF17287 POTRA domain ISU60_RS16510 PF08479 POTRA domain, ShlB-type ISU60_RS16515 PF00092 von Willebrand factor type A domain ISU60_RS16520 PF02342 TerD domain ISU60_RS16530 PF00092 von Willebrand factor type A domain ISU60_RS16545 PF03729 Short repeat of unknown function (DUF308) ISU60_RS16550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU60_RS16550 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS16555 PF05175 Methyltransferase small domain ISU60_RS16565 PF01863 Protein of unknown function DUF45 ISU60_RS16570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU60_RS16575 PF00375 Sodium:dicarboxylate symporter family ISU60_RS16580 PF01797 Transposase IS200 like ISU60_RS16585 PF10688 Bacterial inner membrane protein ISU60_RS16590 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ISU60_RS16590 PF08666 SAF domain ISU60_RS16595 PF01232 Mannitol dehydrogenase Rossmann domain ISU60_RS16595 PF08125 Mannitol dehydrogenase C-terminal domain ISU60_RS16600 PF02614 Glucuronate isomerase ISU60_RS16610 PF07690 Major Facilitator Superfamily ISU60_RS16615 PF07729 FCD domain ISU60_RS16615 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS16625 PF09335 SNARE associated Golgi protein ISU60_RS16630 PF13721 SecD export protein N-terminal TM region ISU60_RS16640 PF05957 Bacterial protein of unknown function (DUF883) ISU60_RS16645 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ISU60_RS16655 PF07681 DoxX ISU60_RS16665 PF02796 Helix-turn-helix domain of resolvase ISU60_RS16665 PF00665 Integrase core domain ISU60_RS16670 PF01695 IstB-like ATP binding protein ISU60_RS16675 PF00293 NUDIX domain ISU60_RS16685 PF07516 SecA Wing and Scaffold domain ISU60_RS16685 PF01043 SecA preprotein cross-linking domain ISU60_RS16685 PF07517 SecA DEAD-like domain ISU60_RS16685 PF02810 SEC-C motif ISU60_RS16690 PF06558 Secretion monitor precursor protein (SecM) ISU60_RS16700 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISU60_RS16705 PF00091 Tubulin/FtsZ family, GTPase domain ISU60_RS16705 PF12327 FtsZ family, C-terminal domain ISU60_RS16710 PF02491 SHS2 domain inserted in FTSA ISU60_RS16715 PF08478 POTRA domain, FtsQ-type ISU60_RS16715 PF03799 Cell division protein FtsQ ISU60_RS16720 PF01820 D-ala D-ala ligase N-terminus ISU60_RS16720 PF07478 D-ala D-ala ligase C-terminus ISU60_RS16725 PF08245 Mur ligase middle domain ISU60_RS16725 PF01225 Mur ligase family, catalytic domain ISU60_RS16725 PF02875 Mur ligase family, glutamate ligase domain ISU60_RS16730 PF03033 Glycosyltransferase family 28 N-terminal domain ISU60_RS16730 PF04101 Glycosyltransferase family 28 C-terminal domain ISU60_RS16735 PF01098 Cell cycle protein ISU60_RS16740 PF08245 Mur ligase middle domain ISU60_RS16740 PF02875 Mur ligase family, glutamate ligase domain ISU60_RS16745 PF00953 Glycosyl transferase family 4 ISU60_RS16745 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ISU60_RS16750 PF02875 Mur ligase family, glutamate ligase domain ISU60_RS16750 PF01225 Mur ligase family, catalytic domain ISU60_RS16750 PF08245 Mur ligase middle domain ISU60_RS16755 PF01225 Mur ligase family, catalytic domain ISU60_RS16755 PF02875 Mur ligase family, glutamate ligase domain ISU60_RS16755 PF08245 Mur ligase middle domain ISU60_RS16760 PF00905 Penicillin binding protein transpeptidase domain ISU60_RS16760 PF03717 Penicillin-binding Protein dimerisation domain ISU60_RS16765 PF04999 Cell division protein FtsL ISU60_RS16770 PF01795 MraW methylase family ISU60_RS16775 PF02381 MraZ protein, putative antitoxin-like ISU60_RS16785 PF06610 L-alanine exporter ISU60_RS16790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU60_RS16790 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS16795 PF01797 Transposase IS200 like ISU60_RS16800 PF10369 Small subunit of acetolactate synthase ISU60_RS16805 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_RS16805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_RS16805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_RS16810 PF00501 AMP-binding enzyme ISU60_RS16815 PF03466 LysR substrate binding domain ISU60_RS16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS16825 PF01797 Transposase IS200 like ISU60_RS16830 PF08502 LeuA allosteric (dimerisation) domain ISU60_RS16830 PF00682 HMGL-like ISU60_RS16835 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU60_RS16840 PF00330 Aconitase family (aconitate hydratase) ISU60_RS16845 PF00694 Aconitase C-terminal domain ISU60_RS16850 PF07690 Major Facilitator Superfamily ISU60_RS16855 PF12793 Sugar transport-related sRNA regulator N-term ISU60_RS16855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU60_RS16865 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS16870 PF00005 ABC transporter ISU60_RS16875 PF09335 SNARE associated Golgi protein ISU60_RS16880 PF00136 DNA polymerase family B ISU60_RS16880 PF03104 DNA polymerase family B, exonuclease domain ISU60_RS16885 PF18339 RapA N-terminal Tudor like domain 1 ISU60_RS16885 PF00176 SNF2 family N-terminal domain ISU60_RS16885 PF00271 Helicase conserved C-terminal domain ISU60_RS16885 PF18337 RapA N-terminal Tudor like domain ISU60_RS16885 PF12137 RNA polymerase recycling family C-terminal ISU60_RS16895 PF14331 ImcF-related N-terminal domain ISU60_RS16895 PF06744 Type VI secretion protein IcmF C-terminal ISU60_RS16895 PF06761 Intracellular multiplication and human macrophage-killing ISU60_RS16900 PF00691 OmpA family ISU60_RS16900 PF05736 OprF membrane domain ISU60_RS16905 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU60_RS16935 PF04717 Type VI secretion system, phage-baseplate injector ISU60_RS16935 PF06715 Gp5 C-terminal repeat (3 copies) ISU60_RS16940 PF17871 AAA lid domain ISU60_RS16940 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_RS16940 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS16940 PF07724 AAA domain (Cdc48 subfamily) ISU60_RS16950 PF05947 Type VI secretion system, TssF ISU60_RS16960 PF01695 IstB-like ATP binding protein ISU60_RS16965 PF02796 Helix-turn-helix domain of resolvase ISU60_RS16965 PF00665 Integrase core domain ISU60_RS16975 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU60_RS16980 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU60_RS16995 PF00849 RNA pseudouridylate synthase ISU60_RS17000 PF00226 DnaJ domain ISU60_RS17000 PF05099 Tellurite resistance protein TerB ISU60_RS17005 PF04453 LPS transport system D ISU60_RS17005 PF03968 OstA-like protein ISU60_RS17010 PF09312 SurA N-terminal domain ISU60_RS17010 PF00639 PPIC-type PPIASE domain ISU60_RS17015 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISU60_RS17020 PF00398 Ribosomal RNA adenine dimethylase ISU60_RS17025 PF04379 ApaG domain ISU60_RS17030 PF00149 Calcineurin-like phosphoesterase ISU60_RS17045 PF01797 Transposase IS200 like ISU60_RS17050 PF00186 Dihydrofolate reductase ISU60_RS17055 PF12821 Threonine/Serine exporter, ThrE ISU60_RS17060 PF06738 Putative threonine/serine exporter ISU60_RS17065 PF01810 LysE type translocator ISU60_RS17070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISU60_RS17070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU60_RS17070 PF02142 MGS-like domain ISU60_RS17075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISU60_RS17075 PF00117 Glutamine amidotransferase class-I ISU60_RS17080 PF01113 Dihydrodipicolinate reductase, N-terminus ISU60_RS17080 PF05173 Dihydrodipicolinate reductase, C-terminus ISU60_RS17085 PF01797 Transposase IS200 like ISU60_RS17090 PF02401 LytB protein ISU60_RS17095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_RS17100 PF01252 Signal peptidase (SPase) II ISU60_RS17105 PF08264 Anticodon-binding domain of tRNA ISU60_RS17105 PF00133 tRNA synthetases class I (I, L, M and V) ISU60_RS17105 PF06827 Zinc finger found in FPG and IleRS ISU60_RS17110 PF06574 FAD synthetase ISU60_RS17110 PF01687 Riboflavin kinase ISU60_RS17115 PF01649 Ribosomal protein S20 ISU60_RS17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS17120 PF03466 LysR substrate binding domain ISU60_RS17125 PF06965 Na+/H+ antiporter 1 ISU60_RS17130 PF00684 DnaJ central domain ISU60_RS17130 PF00226 DnaJ domain ISU60_RS17130 PF01556 DnaJ C terminal domain ISU60_RS17135 PF00012 Hsp70 protein ISU60_RS17140 PF01184 GPR1/FUN34/yaaH family ISU60_RS17150 PF07690 Major Facilitator Superfamily ISU60_RS17155 PF00994 Probable molybdopterin binding domain ISU60_RS17160 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU60_RS17170 PF03883 Peroxide stress protein YaaA ISU60_RS17175 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_RS17175 PF14821 Threonine synthase N terminus ISU60_RS17180 PF08544 GHMP kinases C terminal ISU60_RS17180 PF00288 GHMP kinases N terminal domain ISU60_RS17185 PF03447 Homoserine dehydrogenase, NAD binding domain ISU60_RS17185 PF01842 ACT domain ISU60_RS17185 PF00696 Amino acid kinase family ISU60_RS17185 PF00742 Homoserine dehydrogenase ISU60_RS17185 PF13840 ACT domain ISU60_RS17195 PF08254 Threonine leader peptide ISU60_RS17200 PF00072 Response regulator receiver domain ISU60_RS17200 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS17205 PF05981 CreA protein ISU60_RS17210 PF12833 Helix-turn-helix domain ISU60_RS17210 PF06445 GyrI-like small molecule binding domain ISU60_RS17215 PF00300 Histidine phosphatase superfamily (branch 1) ISU60_RS17220 PF01931 Protein of unknown function DUF84 ISU60_RS17225 PF01371 Trp repressor protein ISU60_RS17230 PF14718 Soluble lytic murein transglycosylase L domain ISU60_RS17230 PF01464 Transglycosylase SLT domain ISU60_RS17235 PF00689 Cation transporting ATPase, C-terminus ISU60_RS17235 PF00690 Cation transporter/ATPase, N-terminus ISU60_RS17245 PF00990 Diguanylate cyclase, GGDEF domain ISU60_RS17245 PF17152 Periplasmic sensor domain ISU60_RS17250 PF00691 OmpA family ISU60_RS17260 PF02661 Fic/DOC family ISU60_RS17265 PF13521 AAA domain ISU60_RS17265 PF01381 Helix-turn-helix ISU60_RS17270 PF18073 Rubredoxin metal binding domain ISU60_RS17275 PF18429 Domain of unknown function (DUF5609) ISU60_RS17280 PF10144 Bacterial virulence factor haemolysin ISU60_RS17285 PF01048 Phosphorylase superfamily ISU60_RS17290 PF01676 Metalloenzyme superfamily ISU60_RS17300 PF01791 DeoC/LacD family aldolase ISU60_RS17305 PF07662 Na+ dependent nucleoside transporter C-terminus ISU60_RS17305 PF01773 Na+ dependent nucleoside transporter N-terminus ISU60_RS17305 PF07670 Nucleoside recognition ISU60_RS17310 PF01026 TatD related DNase ISU60_RS17315 PF01734 Patatin-like phospholipase ISU60_RS17320 PF07043 Protein of unknown function (DUF1328) ISU60_RS17325 PF04972 BON domain ISU60_RS17330 PF16658 Class II release factor RF3, C-terminal domain ISU60_RS17330 PF03144 Elongation factor Tu domain 2 ISU60_RS17330 PF00009 Elongation factor Tu GTP binding domain ISU60_RS17335 PF00583 Acetyltransferase (GNAT) family ISU60_RS17340 PF03603 DNA polymerase III psi subunit ISU60_RS17345 PF08468 Methyltransferase small domain N-terminal ISU60_RS17345 PF05175 Methyltransferase small domain ISU60_RS17355 PF07256 Protein of unknown function (DUF1435) ISU60_RS17360 PF00990 Diguanylate cyclase, GGDEF domain ISU60_RS17365 PF01095 Pectinesterase ISU60_RS17380 PF00873 AcrB/AcrD/AcrF family ISU60_RS17385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS17400 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU60_RS17405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_RS17405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_RS17420 PF00005 ABC transporter ISU60_RS17425 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS17430 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS17435 PF13407 Periplasmic binding protein domain ISU60_RS17440 PF01791 DeoC/LacD family aldolase ISU60_RS17445 PF03992 Antibiotic biosynthesis monooxygenase ISU60_RS17450 PF10696 Protein of unknown function (DUF2501) ISU60_RS17455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU60_RS17455 PF02896 PEP-utilising enzyme, TIM barrel domain ISU60_RS17455 PF05524 PEP-utilising enzyme, N-terminal ISU60_RS17455 PF00391 PEP-utilising enzyme, mobile domain ISU60_RS17455 PF00381 PTS HPr component phosphorylation site ISU60_RS17465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_RS17470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU60_RS17475 PF12833 Helix-turn-helix domain ISU60_RS17485 PF05987 Bacterial protein of unknown function (DUF898) ISU60_RS17525 PF01555 DNA methylase ISU60_RS17540 PF12102 Domain of unknown function (DUF3578) ISU60_RS17540 PF07728 AAA domain (dynein-related subfamily) ISU60_RS17545 PF02796 Helix-turn-helix domain of resolvase ISU60_RS17545 PF00665 Integrase core domain ISU60_RS17550 PF01695 IstB-like ATP binding protein ISU60_RS17555 PF08676 MutL C terminal dimerisation domain ISU60_RS17555 PF01119 DNA mismatch repair protein, C-terminal domain ISU60_RS17565 PF13356 Arm DNA-binding domain ISU60_RS17565 PF00589 Phage integrase family ISU60_RS17575 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU60_RS17580 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU60_RS17585 PF02789 Cytosol aminopeptidase family, N-terminal domain ISU60_RS17585 PF00883 Cytosol aminopeptidase family, catalytic domain ISU60_RS17590 PF04364 DNA polymerase III chi subunit, HolC ISU60_RS17595 PF00133 tRNA synthetases class I (I, L, M and V) ISU60_RS17595 PF08264 Anticodon-binding domain of tRNA ISU60_RS17595 PF10458 Valyl tRNA synthetase tRNA binding arm ISU60_RS17600 PF00583 Acetyltransferase (GNAT) family ISU60_RS17605 PF06877 Regulator of ribonuclease activity B ISU60_RS17610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU60_RS17610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU60_RS17615 PF04074 YhcH/YjgK/YiaL ISU60_RS17625 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS17630 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU60_RS17630 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS17635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_RS17635 PF00005 ABC transporter ISU60_RS17640 PF00005 ABC transporter ISU60_RS17640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU60_RS17645 PF13597 Anaerobic ribonucleoside-triphosphate reductase ISU60_RS17645 PF03477 ATP cone domain ISU60_RS17655 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS17655 PF07702 UTRA domain ISU60_RS17660 PF06754 Phosphonate metabolism protein PhnG ISU60_RS17665 PF05845 Bacterial phosphonate metabolism protein (PhnH) ISU60_RS17670 PF05861 Bacterial phosphonate metabolism protein (PhnI) ISU60_RS17675 PF06007 Phosphonate metabolism protein PhnJ ISU60_RS17680 PF00005 ABC transporter ISU60_RS17685 PF00005 ABC transporter ISU60_RS17690 PF07969 Amidohydrolase family ISU60_RS17700 PF12706 Beta-lactamase superfamily domain ISU60_RS17705 PF13460 NAD(P)H-binding ISU60_RS17720 PF17912 MalK OB fold domain ISU60_RS17720 PF03459 TOBE domain ISU60_RS17720 PF00005 ABC transporter ISU60_RS17725 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS17730 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS17735 PF13416 Bacterial extracellular solute-binding protein ISU60_RS17750 PF01541 GIY-YIG catalytic domain ISU60_RS17755 PF13508 Acetyltransferase (GNAT) domain ISU60_RS17760 PF02036 SCP-2 sterol transfer family ISU60_RS17765 PF01136 Peptidase family U32 ISU60_RS17770 PF01136 Peptidase family U32 ISU60_RS17775 PF02321 Outer membrane efflux protein ISU60_RS17775 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU60_RS17780 PF00873 AcrB/AcrD/AcrF family ISU60_RS17785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS17785 PF00529 HlyD membrane-fusion protein of T1SS ISU60_RS17790 PF00296 Luciferase-like monooxygenase ISU60_RS17800 PF01381 Helix-turn-helix ISU60_RS17810 PF03880 DbpA RNA binding domain ISU60_RS17810 PF00270 DEAD/DEAH box helicase ISU60_RS17810 PF12343 Cold shock protein DEAD box A ISU60_RS17810 PF00271 Helicase conserved C-terminal domain ISU60_RS17820 PF13181 Tetratricopeptide repeat ISU60_RS17820 PF07719 Tetratricopeptide repeat ISU60_RS17825 PF00013 KH domain ISU60_RS17825 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISU60_RS17825 PF01138 3' exoribonuclease family, domain 1 ISU60_RS17825 PF00575 S1 RNA binding domain ISU60_RS17825 PF03725 3' exoribonuclease family, domain 2 ISU60_RS17835 PF00312 Ribosomal protein S15 ISU60_RS17840 PF09157 Pseudouridine synthase II TruB, C-terminal ISU60_RS17840 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISU60_RS17840 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISU60_RS17845 PF02033 Ribosome-binding factor A ISU60_RS17850 PF00009 Elongation factor Tu GTP binding domain ISU60_RS17850 PF03144 Elongation factor Tu domain 2 ISU60_RS17850 PF08364 Bacterial translation initiation factor IF-2 associated region ISU60_RS17850 PF11987 Translation-initiation factor 2 ISU60_RS17850 PF04760 Translation initiation factor IF-2, N-terminal region ISU60_RS17855 PF08529 NusA N-terminal domain ISU60_RS17855 PF00575 S1 RNA binding domain ISU60_RS17855 PF13184 NusA-like KH domain ISU60_RS17860 PF17384 RimP C-terminal SH3 domain ISU60_RS17860 PF02576 RimP N-terminal domain ISU60_RS17875 PF03840 Preprotein translocase SecG subunit ISU60_RS17880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU60_RS17880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU60_RS17880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU60_RS17880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU60_RS17885 PF00809 Pterin binding enzyme ISU60_RS17890 PF01434 Peptidase family M41 ISU60_RS17890 PF06480 FtsH Extracellular ISU60_RS17890 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS17890 PF17862 AAA+ lid domain ISU60_RS17895 PF01728 FtsJ-like methyltransferase ISU60_RS17900 PF01985 CRS1 / YhbY (CRM) domain ISU60_RS17905 PF03449 Transcription elongation factor, N-terminal ISU60_RS17905 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU60_RS17910 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ISU60_RS17915 PF00072 Response regulator receiver domain ISU60_RS17915 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS17920 PF00672 HAMP domain ISU60_RS17920 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS17925 PF01018 GTP1/OBG ISU60_RS17925 PF01926 50S ribosome-binding GTPase ISU60_RS17930 PF00892 EamA-like transporter family ISU60_RS17935 PF01016 Ribosomal L27 protein ISU60_RS17940 PF00829 Ribosomal prokaryotic L21 protein ISU60_RS17945 PF00348 Polyprenyl synthetase ISU60_RS17955 PF13693 Winged helix-turn-helix DNA-binding ISU60_RS17960 PF00056 lactate/malate dehydrogenase, NAD binding domain ISU60_RS17960 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISU60_RS17965 PF02863 Arginine repressor, C-terminal domain ISU60_RS17965 PF01316 Arginine repressor, DNA binding domain ISU60_RS17975 PF01225 Mur ligase family, catalytic domain ISU60_RS17975 PF02875 Mur ligase family, glutamate ligase domain ISU60_RS17975 PF08245 Mur ligase middle domain ISU60_RS17980 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISU60_RS17985 PF00719 Inorganic pyrophosphatase ISU60_RS17990 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ISU60_RS17995 PF04357 TamB, inner membrane protein subunit of TAM complex ISU60_RS18000 PF17243 POTRA domain TamA domain 1 ISU60_RS18000 PF07244 Surface antigen variable number repeat ISU60_RS18000 PF01103 Surface antigen ISU60_RS18005 PF01625 Peptide methionine sulfoxide reductase ISU60_RS18010 PF03471 Transporter associated domain ISU60_RS18010 PF00571 CBS domain ISU60_RS18010 PF01595 Cyclin M transmembrane N-terminal domain ISU60_RS18015 PF06526 Protein of unknown function (DUF1107) ISU60_RS18020 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ISU60_RS18025 PF00459 Inositol monophosphatase family ISU60_RS18030 PF00149 Calcineurin-like phosphoesterase ISU60_RS18030 PF02872 5'-nucleotidase, C-terminal domain ISU60_RS18035 PF01814 Hemerythrin HHE cation binding domain ISU60_RS18035 PF04405 Domain of Unknown function (DUF542) ISU60_RS18040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU60_RS18040 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU60_RS18045 PF04225 Opacity-associated protein A LysM-like domain ISU60_RS18045 PF08525 Opacity-associated protein A N-terminal motif ISU60_RS18055 PF01797 Transposase IS200 like ISU60_RS18060 PF03948 Ribosomal protein L9, C-terminal domain ISU60_RS18060 PF01281 Ribosomal protein L9, N-terminal domain ISU60_RS18065 PF01084 Ribosomal protein S18 ISU60_RS18070 PF00436 Single-strand binding protein family ISU60_RS18075 PF01250 Ribosomal protein S6 ISU60_RS18080 PF00326 Prolyl oligopeptidase family ISU60_RS18085 PF00665 Integrase core domain ISU60_RS18085 PF02796 Helix-turn-helix domain of resolvase ISU60_RS18090 PF01695 IstB-like ATP binding protein ISU60_RS18100 PF07338 Protein of unknown function (DUF1471) ISU60_RS18105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU60_RS18105 PF18158 Adaptive response protein AidB N-terminal domain ISU60_RS18105 PF02770 Acyl-CoA dehydrogenase, middle domain ISU60_RS18110 PF00588 SpoU rRNA Methylase family ISU60_RS18110 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU60_RS18115 PF08461 Ribonuclease R winged-helix domain ISU60_RS18115 PF00773 RNB domain ISU60_RS18115 PF08206 Ribonuclease B OB domain ISU60_RS18115 PF00575 S1 RNA binding domain ISU60_RS18115 PF17876 Cold shock domain ISU60_RS18120 PF02082 Transcriptional regulator ISU60_RS18125 PF00709 Adenylosuccinate synthetase ISU60_RS18130 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ISU60_RS18135 PF01145 SPFH domain / Band 7 family ISU60_RS18140 PF01145 SPFH domain / Band 7 family ISU60_RS18140 PF12221 Bacterial membrane protein N terminal ISU60_RS18145 PF16360 GTP-binding GTPase Middle Region ISU60_RS18145 PF01926 50S ribosome-binding GTPase ISU60_RS18145 PF13167 GTP-binding GTPase N-terminal ISU60_RS18150 PF17209 Hfq protein ISU60_RS18160 PF08676 MutL C terminal dimerisation domain ISU60_RS18160 PF01119 DNA mismatch repair protein, C-terminal domain ISU60_RS18165 PF01520 N-acetylmuramoyl-L-alanine amidase ISU60_RS18170 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISU60_RS18175 PF01256 Carbohydrate kinase ISU60_RS18175 PF03853 YjeF-related protein N-terminus ISU60_RS18180 PF08331 Domain of unknown function (DUF1730) ISU60_RS18195 PF00929 Exonuclease ISU60_RS18200 PF03193 RsgA GTPase ISU60_RS18205 PF02666 Phosphatidylserine decarboxylase ISU60_RS18210 PF00924 Mechanosensitive ion channel ISU60_RS18210 PF12795 Mechanosensitive ion channel porin domain ISU60_RS18210 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU60_RS18215 PF00152 tRNA synthetases class II (D, K and N) ISU60_RS18225 PF00890 FAD binding domain ISU60_RS18225 PF02910 Fumarate reductase flavoprotein C-term ISU60_RS18230 PF13183 4Fe-4S dicluster domain ISU60_RS18230 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU60_RS18235 PF02300 Fumarate reductase subunit C ISU60_RS18240 PF02313 Fumarate reductase subunit D ISU60_RS18245 PF00893 Small Multidrug Resistance protein ISU60_RS18250 PF08207 Elongation factor P (EF-P) KOW-like domain ISU60_RS18250 PF09285 Elongation factor P, C-terminal ISU60_RS18250 PF01132 Elongation factor P (EF-P) OB domain ISU60_RS18255 PF04055 Radical SAM superfamily ISU60_RS18260 PF13698 Domain of unknown function (DUF4156) ISU60_RS18265 PF00118 TCP-1/cpn60 chaperonin family ISU60_RS18270 PF00166 Chaperonin 10 Kd subunit ISU60_RS18275 PF04186 FxsA cytoplasmic membrane protein ISU60_RS18280 PF00206 Lyase ISU60_RS18280 PF10415 Fumarase C C-terminus ISU60_RS18285 PF03605 Anaerobic c4-dicarboxylate membrane transporter ISU60_RS18290 PF03091 CutA1 divalent ion tolerance protein ISU60_RS18295 PF02683 Cytochrome C biogenesis protein transmembrane region ISU60_RS18295 PF11412 Disulphide bond corrector protein DsbC ISU60_RS18300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU60_RS18300 PF00384 Molybdopterin oxidoreductase ISU60_RS18300 PF01568 Molydopterin dinucleotide binding domain ISU60_RS18305 PF12800 4Fe-4S binding domain ISU60_RS18305 PF13247 4Fe-4S dicluster domain ISU60_RS18310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS18310 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU60_RS18310 PF13247 4Fe-4S dicluster domain ISU60_RS18340 PF06379 L-rhamnose-proton symport protein (RhaT) ISU60_RS18345 PF02311 AraC-like ligand binding domain ISU60_RS18345 PF12833 Helix-turn-helix domain ISU60_RS18350 PF02311 AraC-like ligand binding domain ISU60_RS18350 PF12833 Helix-turn-helix domain ISU60_RS18360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_RS18360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_RS18365 PF06134 L-rhamnose isomerase (RhaA) ISU60_RS18370 PF00596 Class II Aldolase and Adducin N-terminal domain ISU60_RS18375 PF00465 Iron-containing alcohol dehydrogenase ISU60_RS18380 PF05336 L-rhamnose mutarotase ISU60_RS18385 PF00436 Single-strand binding protein family ISU60_RS18390 PF00005 ABC transporter ISU60_RS18390 PF17755 UvrA DNA-binding domain ISU60_RS18390 PF17760 UvrA interaction domain ISU60_RS18395 PF04237 YjbR ISU60_RS18400 PF00155 Aminotransferase class I and II ISU60_RS18405 PF01168 Alanine racemase, N-terminal domain ISU60_RS18405 PF00842 Alanine racemase, C-terminal domain ISU60_RS18410 PF00772 DnaB-like helicase N terminal domain ISU60_RS18410 PF03796 DnaB-like helicase C terminal domain ISU60_RS18415 PF00107 Zinc-binding dehydrogenase ISU60_RS18415 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_RS18420 PF09583 Phage shock protein G (Phageshock_PspG) ISU60_RS18425 PF01207 Dihydrouridine synthase (Dus) ISU60_RS18430 PF01475 Ferric uptake regulator family ISU60_RS18435 PF01726 LexA DNA binding domain ISU60_RS18435 PF00717 Peptidase S24-like ISU60_RS18440 PF01219 Prokaryotic diacylglycerol kinase ISU60_RS18445 PF01553 Acyltransferase ISU60_RS18450 PF01040 UbiA prenyltransferase family ISU60_RS18455 PF04345 Chorismate lyase ISU60_RS18460 PF12951 Passenger-associated-transport-repeat ISU60_RS18465 PF01565 FAD binding domain ISU60_RS18465 PF08031 Berberine and berberine like ISU60_RS18480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS18485 PF00577 Outer membrane usher protein ISU60_RS18485 PF13954 PapC N-terminal domain ISU60_RS18485 PF13953 PapC C-terminal domain ISU60_RS18495 PF02342 TerD domain ISU60_RS18500 PF02342 TerD domain ISU60_RS18505 PF03741 Integral membrane protein TerC family ISU60_RS18510 PF05099 Tellurite resistance protein TerB ISU60_RS18515 PF02342 TerD domain ISU60_RS18520 PF02342 TerD domain ISU60_RS18540 PF15608 PELOTA RNA binding domain ISU60_RS18540 PF11202 Phosphoribosyl transferase (PRTase) ISU60_RS18560 PF04055 Radical SAM superfamily ISU60_RS18565 PF06228 Haem utilisation ChuX/HutX ISU60_RS18570 PF13460 NAD(P)H-binding ISU60_RS18580 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS18580 PF00593 TonB dependent receptor ISU60_RS18585 PF05171 Haemin-degrading HemS.ChuX domain ISU60_RS18590 PF01497 Periplasmic binding protein ISU60_RS18595 PF01032 FecCD transport family ISU60_RS18600 PF00005 ABC transporter ISU60_RS18605 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU60_RS18610 PF03222 Tryptophan/tyrosine permease family ISU60_RS18615 PF03466 LysR substrate binding domain ISU60_RS18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS18620 PF01206 Sulfurtransferase TusA ISU60_RS18625 PF04143 Sulphur transport ISU60_RS18630 PF01312 FlhB HrpN YscU SpaS Family ISU60_RS18635 PF01311 Bacterial export proteins, family 1 ISU60_RS18640 PF01313 Bacterial export proteins, family 3 ISU60_RS18645 PF00813 FliP family ISU60_RS18650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU60_RS18665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_RS18665 PF18269 T3SS EscN ATPase C-terminal domain ISU60_RS18670 PF00771 FHIPEP family ISU60_RS18685 PF01514 Secretory protein of YscJ/FliF family ISU60_RS18720 PF00263 Bacterial type II and III secretion system protein ISU60_RS18720 PF03958 Bacterial type II/III secretion system short domain ISU60_RS18725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU60_RS18725 PF00672 HAMP domain ISU60_RS18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS18725 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS18725 PF01627 Hpt domain ISU60_RS18725 PF00072 Response regulator receiver domain ISU60_RS18730 PF00196 Bacterial regulatory proteins, luxR family ISU60_RS18730 PF00072 Response regulator receiver domain ISU60_RS18735 PF00375 Sodium:dicarboxylate symporter family ISU60_RS18740 PF16177 Acetyl-coenzyme A synthetase N-terminus ISU60_RS18740 PF00501 AMP-binding enzyme ISU60_RS18740 PF13193 AMP-binding enzyme C-terminal domain ISU60_RS18745 PF04341 Protein of unknown function, DUF485 ISU60_RS18750 PF00474 Sodium:solute symporter family ISU60_RS18760 PF00665 Integrase core domain ISU60_RS18760 PF02796 Helix-turn-helix domain of resolvase ISU60_RS18765 PF01695 IstB-like ATP binding protein ISU60_RS18800 PF02142 MGS-like domain ISU60_RS18800 PF01808 AICARFT/IMPCHase bienzyme ISU60_RS18805 PF02844 Phosphoribosylglycinamide synthetase, N domain ISU60_RS18805 PF02843 Phosphoribosylglycinamide synthetase, C domain ISU60_RS18805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU60_RS18810 PF07356 Protein of unknown function (DUF1481) ISU60_RS18815 PF00216 Bacterial DNA-binding protein ISU60_RS18820 PF04222 Protein of unknown function (DUF416) ISU60_RS18825 PF04493 Endonuclease V ISU60_RS18830 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISU60_RS18840 PF09297 NADH pyrophosphatase zinc ribbon domain ISU60_RS18840 PF00293 NUDIX domain ISU60_RS18845 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU60_RS18850 PF13667 ThiC-associated domain ISU60_RS18850 PF01964 Radical SAM ThiC family ISU60_RS18855 PF02581 Thiamine monophosphate synthase ISU60_RS18860 PF00899 ThiF family ISU60_RS18870 PF05690 Thiazole biosynthesis protein ThiG ISU60_RS18875 PF04055 Radical SAM superfamily ISU60_RS18875 PF06968 Biotin and Thiamin Synthesis associated domain ISU60_RS18880 PF01797 Transposase IS200 like ISU60_RS18885 PF04998 RNA polymerase Rpb1, domain 5 ISU60_RS18885 PF05000 RNA polymerase Rpb1, domain 4 ISU60_RS18885 PF04983 RNA polymerase Rpb1, domain 3 ISU60_RS18885 PF00623 RNA polymerase Rpb1, domain 2 ISU60_RS18885 PF04997 RNA polymerase Rpb1, domain 1 ISU60_RS18890 PF04563 RNA polymerase beta subunit ISU60_RS18890 PF04561 RNA polymerase Rpb2, domain 2 ISU60_RS18890 PF04565 RNA polymerase Rpb2, domain 3 ISU60_RS18890 PF10385 RNA polymerase beta subunit external 1 domain ISU60_RS18890 PF00562 RNA polymerase Rpb2, domain 6 ISU60_RS18890 PF04560 RNA polymerase Rpb2, domain 7 ISU60_RS18895 PF00542 Ribosomal protein L7/L12 C-terminal domain ISU60_RS18895 PF16320 Ribosomal protein L7/L12 dimerisation domain ISU60_RS18900 PF00466 Ribosomal protein L10 ISU60_RS18905 PF00687 Ribosomal protein L1p/L10e family ISU60_RS18910 PF03946 Ribosomal protein L11, N-terminal domain ISU60_RS18910 PF00298 Ribosomal protein L11, RNA binding domain ISU60_RS18915 PF00467 KOW motif ISU60_RS18915 PF02357 Transcription termination factor nusG ISU60_RS18920 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISU60_RS18925 PF03143 Elongation factor Tu C-terminal domain ISU60_RS18925 PF00009 Elongation factor Tu GTP binding domain ISU60_RS18925 PF03144 Elongation factor Tu domain 2 ISU60_RS18950 PF01695 IstB-like ATP binding protein ISU60_RS18955 PF00665 Integrase core domain ISU60_RS18955 PF02796 Helix-turn-helix domain of resolvase ISU60_RS18960 PF13673 Acetyltransferase (GNAT) domain ISU60_RS18965 PF00485 Phosphoribulokinase / Uridine kinase family ISU60_RS18970 PF08279 HTH domain ISU60_RS18970 PF02237 Biotin protein ligase C terminal domain ISU60_RS18970 PF03099 Biotin/lipoate A/B protein ligase family ISU60_RS18975 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISU60_RS18975 PF01565 FAD binding domain ISU60_RS19005 PF12724 Flavodoxin domain ISU60_RS19010 PF02386 Cation transport protein ISU60_RS19025 PF01205 Uncharacterized protein family UPF0029 ISU60_RS19025 PF09186 Domain of unknown function (DUF1949) ISU60_RS19030 PF00557 Metallopeptidase family M24 ISU60_RS19035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU60_RS19035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU60_RS19035 PF00378 Enoyl-CoA hydratase/isomerase ISU60_RS19040 PF02803 Thiolase, C-terminal domain ISU60_RS19040 PF00108 Thiolase, N-terminal domain ISU60_RS19045 PF00970 Oxidoreductase FAD-binding domain ISU60_RS19045 PF00175 Oxidoreductase NAD-binding domain ISU60_RS19050 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ISU60_RS19055 PF02357 Transcription termination factor nusG ISU60_RS19060 PF00490 Delta-aminolevulinic acid dehydratase ISU60_RS19065 PF01026 TatD related DNase ISU60_RS19070 PF01695 IstB-like ATP binding protein ISU60_RS19075 PF02796 Helix-turn-helix domain of resolvase ISU60_RS19075 PF00665 Integrase core domain ISU60_RS19085 PF00902 Sec-independent protein translocase protein (TatC) ISU60_RS19095 PF02416 mttA/Hcf106 family ISU60_RS19100 PF03109 ABC1 family ISU60_RS19105 PF02036 SCP-2 sterol transfer family ISU60_RS19110 PF01209 ubiE/COQ5 methyltransferase family ISU60_RS19115 PF02646 RmuC family ISU60_RS19120 PF09335 SNARE associated Golgi protein ISU60_RS19125 PF13722 5TM C-terminal transporter carbon starvation CstA ISU60_RS19125 PF02554 Carbon starvation protein CstA ISU60_RS19135 PF01048 Phosphorylase superfamily ISU60_RS19140 PF01738 Dienelactone hydrolase family ISU60_RS19145 PF08267 Cobalamin-independent synthase, N-terminal domain ISU60_RS19145 PF01717 Cobalamin-independent synthase, Catalytic domain ISU60_RS19150 PF03466 LysR substrate binding domain ISU60_RS19150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS19155 PF00892 EamA-like transporter family ISU60_RS19160 PF03547 Membrane transport protein ISU60_RS19170 PF00005 ABC transporter ISU60_RS19170 PF17912 MalK OB fold domain ISU60_RS19175 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS19180 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS19185 PF13416 Bacterial extracellular solute-binding protein ISU60_RS19225 PF00005 ABC transporter ISU60_RS19230 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU60_RS19230 PF00005 ABC transporter ISU60_RS19235 PF11862 Domain of unknown function (DUF3382) ISU60_RS19235 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS19240 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS19245 PF13458 Periplasmic binding protein ISU60_RS19250 PF12568 Acetyltransferase (GNAT) domain, PanZ ISU60_RS19255 PF01797 Transposase IS200 like ISU60_RS19260 PF04545 Sigma-70, region 4 ISU60_RS19260 PF04542 Sigma-70 region 2 ISU60_RS19260 PF00140 Sigma-70 factor, region 1.2 ISU60_RS19265 PF18075 FtsX extracellular domain ISU60_RS19265 PF02687 FtsX-like permease family ISU60_RS19270 PF00005 ABC transporter ISU60_RS19275 PF02881 SRP54-type protein, helical bundle domain ISU60_RS19275 PF00448 SRP54-type protein, GTPase domain ISU60_RS19275 PF00448 SRP54-type protein, GTPase domain ISU60_RS19275 PF02881 SRP54-type protein, helical bundle domain ISU60_RS19285 PF06611 Protein of unknown function (DUF1145) ISU60_RS19300 PF07947 YhhN family ISU60_RS19305 PF00403 Heavy-metal-associated domain ISU60_RS19310 PF01206 Sulfurtransferase TusA ISU60_RS19315 PF02592 Putative vitamin uptake transporter ISU60_RS19320 PF08786 DcrB ISU60_RS19325 PF13183 4Fe-4S dicluster domain ISU60_RS19325 PF02754 Cysteine-rich domain ISU60_RS19330 PF00890 FAD binding domain ISU60_RS19335 PF01266 FAD dependent oxidoreductase ISU60_RS19335 PF04324 BFD-like [2Fe-2S] binding domain ISU60_RS19340 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU60_RS19355 PF12146 Serine aminopeptidase, S33 ISU60_RS19360 PF01810 LysE type translocator ISU60_RS19365 PF01810 LysE type translocator ISU60_RS19370 PF09382 RQC domain ISU60_RS19370 PF16124 RecQ zinc-binding ISU60_RS19370 PF00570 HRDC domain ISU60_RS19370 PF00271 Helicase conserved C-terminal domain ISU60_RS19370 PF00270 DEAD/DEAH box helicase ISU60_RS19375 PF02253 Phospholipase A1 ISU60_RS19380 PF03061 Thioesterase superfamily ISU60_RS19385 PF00892 EamA-like transporter family ISU60_RS19390 PF01544 CorA-like Mg2+ transporter protein ISU60_RS19395 PF09370 Phosphoenolpyruvate hydrolase-like ISU60_RS19410 PF00580 UvrD/REP helicase N-terminal domain ISU60_RS19410 PF13361 UvrD-like helicase C-terminal domain ISU60_RS19415 PF13419 Haloacid dehalogenase-like hydrolase ISU60_RS19420 PF02899 Phage integrase, N-terminal SAM-like domain ISU60_RS19420 PF00589 Phage integrase family ISU60_RS19425 PF04340 Protein of unknown function, DUF484 ISU60_RS19430 PF01678 Diaminopimelate epimerase ISU60_RS19435 PF13627 Prokaryotic lipoprotein-attachment site ISU60_RS19440 PF01491 Frataxin-like domain ISU60_RS19445 PF12633 Adenylate cyclase NT domain ISU60_RS19445 PF01295 Adenylate cyclase, class-I ISU60_RS19455 PF03900 Porphobilinogen deaminase, C-terminal domain ISU60_RS19455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISU60_RS19460 PF02602 Uroporphyrinogen-III synthase HemD ISU60_RS19465 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ISU60_RS19470 PF07219 HemY protein N-terminus ISU60_RS19470 PF07719 Tetratricopeptide repeat ISU60_RS19500 PF00324 Amino acid permease ISU60_RS19505 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISU60_RS19510 PF06899 WzyE protein, O-antigen assembly polymerase ISU60_RS19515 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ISU60_RS19520 PF01943 Polysaccharide biosynthesis protein ISU60_RS19525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU60_RS19535 PF00483 Nucleotidyl transferase ISU60_RS19540 PF16363 GDP-mannose 4,6 dehydratase ISU60_RS19545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU60_RS19545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU60_RS19545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU60_RS19550 PF02350 UDP-N-acetylglucosamine 2-epimerase ISU60_RS19555 PF02706 Chain length determinant protein ISU60_RS19560 PF00953 Glycosyl transferase family 4 ISU60_RS19565 PF07498 Rho termination factor, N-terminal domain ISU60_RS19565 PF07497 Rho termination factor, RNA-binding domain ISU60_RS19565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_RS19570 PF00085 Thioredoxin ISU60_RS19575 PF00270 DEAD/DEAH box helicase ISU60_RS19575 PF00271 Helicase conserved C-terminal domain ISU60_RS19585 PF13361 UvrD-like helicase C-terminal domain ISU60_RS19585 PF00580 UvrD/REP helicase N-terminal domain ISU60_RS19605 PF00872 Transposase, Mutator family ISU60_RS19615 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS19615 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS19620 PF13953 PapC C-terminal domain ISU60_RS19620 PF13954 PapC N-terminal domain ISU60_RS19620 PF00577 Outer membrane usher protein ISU60_RS19630 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU60_RS19630 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU60_RS19635 PF01320 Colicin immunity protein / pyocin immunity protein ISU60_RS19660 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISU60_RS19660 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISU60_RS19665 PF03466 LysR substrate binding domain ISU60_RS19665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS19700 PF00585 C-terminal regulatory domain of Threonine dehydratase ISU60_RS19700 PF00291 Pyridoxal-phosphate dependent enzyme ISU60_RS19705 PF00920 Dehydratase family ISU60_RS19710 PF01063 Amino-transferase class IV ISU60_RS19720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU60_RS19720 PF00205 Thiamine pyrophosphate enzyme, central domain ISU60_RS19720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU60_RS19725 PF08046 IlvGEDA operon leader peptide ISU60_RS19730 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISU60_RS19730 PF01078 Magnesium chelatase, subunit ChlI ISU60_RS19735 PF04219 Protein of unknown function, DUF ISU60_RS19740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS19740 PF03466 LysR substrate binding domain ISU60_RS19745 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS19750 PF02653 Branched-chain amino acid transport system / permease component ISU60_RS19755 PF00005 ABC transporter ISU60_RS19760 PF13407 Periplasmic binding protein domain ISU60_RS19795 PF01177 Asp/Glu/Hydantoin racemase ISU60_RS19800 PF00593 TonB dependent receptor ISU60_RS19800 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS19805 PF05958 tRNA (Uracil-5-)-methyltransferase ISU60_RS19810 PF07226 Protein of unknown function (DUF1422) ISU60_RS19815 PF00440 Bacterial regulatory proteins, tetR family ISU60_RS19820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_RS19820 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS19825 PF03466 LysR substrate binding domain ISU60_RS19830 PF00462 Glutaredoxin ISU60_RS19830 PF08534 Redoxin ISU60_RS19835 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU60_RS19835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU60_RS19840 PF03544 Gram-negative bacterial TonB protein C-terminal ISU60_RS19845 PF00529 HlyD membrane-fusion protein of T1SS ISU60_RS19850 PF00664 ABC transporter transmembrane region ISU60_RS19850 PF00005 ABC transporter ISU60_RS19860 PF00593 TonB dependent receptor ISU60_RS19860 PF07715 TonB-dependent Receptor Plug Domain ISU60_RS19865 PF14698 Argininosuccinate lyase C-terminal ISU60_RS19865 PF00206 Lyase ISU60_RS19870 PF00696 Amino acid kinase family ISU60_RS19875 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU60_RS19875 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU60_RS19880 PF07687 Peptidase dimerisation domain ISU60_RS19880 PF01546 Peptidase family M20/M25/M40 ISU60_RS19885 PF00311 Phosphoenolpyruvate carboxylase ISU60_RS19895 PF02219 Methylenetetrahydrofolate reductase ISU60_RS19900 PF03447 Homoserine dehydrogenase, NAD binding domain ISU60_RS19900 PF00742 Homoserine dehydrogenase ISU60_RS19900 PF00696 Amino acid kinase family ISU60_RS19910 PF01340 Met Apo-repressor, MetJ ISU60_RS19915 PF05360 yiaA/B two helix domain ISU60_RS19920 PF01197 Ribosomal protein L31 ISU60_RS19925 PF18074 Primosomal protein N C-terminal domain ISU60_RS19925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISU60_RS19925 PF17764 3′ DNA-binding domain (3′BD) ISU60_RS19925 PF00270 DEAD/DEAH box helicase ISU60_RS19925 PF00271 Helicase conserved C-terminal domain ISU60_RS19930 PF00356 Bacterial regulatory proteins, lacI family ISU60_RS19935 PF05036 Sporulation related domain ISU60_RS19940 PF00227 Proteasome subunit ISU60_RS19945 PF10431 C-terminal, D2-small domain, of ClpB protein ISU60_RS19945 PF07724 AAA domain (Cdc48 subfamily) ISU60_RS19945 PF00004 ATPase family associated with various cellular activities (AAA) ISU60_RS19950 PF01040 UbiA prenyltransferase family ISU60_RS19955 PF03737 Aldolase/RraA ISU60_RS19970 PF00529 HlyD membrane-fusion protein of T1SS ISU60_RS19970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU60_RS19975 PF03412 Peptidase C39 family ISU60_RS19975 PF00005 ABC transporter ISU60_RS19975 PF00664 ABC transporter transmembrane region ISU60_RS19985 PF06005 Cell division protein ZapB ISU60_RS19990 PF00230 Major intrinsic protein ISU60_RS19995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU60_RS19995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU60_RS20000 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ISU60_RS20005 PF00970 Oxidoreductase FAD-binding domain ISU60_RS20005 PF00175 Oxidoreductase NAD-binding domain ISU60_RS20010 PF05656 Protein of unknown function (DUF805) ISU60_RS20015 PF07305 Protein of unknown function (DUF1454) ISU60_RS20020 PF00121 Triosephosphate isomerase ISU60_RS20025 PF03466 LysR substrate binding domain ISU60_RS20025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU60_RS20030 PF02585 GlcNAc-PI de-N-acetylase ISU60_RS20035 PF03737 Aldolase/RraA ISU60_RS20040 PF00939 Sodium:sulfate symporter transmembrane region ISU60_RS20055 PF00365 Phosphofructokinase ISU60_RS20060 PF16916 Dimerisation domain of Zinc Transporter ISU60_RS20060 PF01545 Cation efflux family ISU60_RS20065 PF04754 Putative transposase, YhgA-like ISU60_RS20075 PF07813 LTXXQ motif family protein ISU60_RS20080 PF00486 Transcriptional regulatory protein, C terminal ISU60_RS20080 PF00072 Response regulator receiver domain ISU60_RS20085 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU60_RS20085 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS20085 PF00672 HAMP domain ISU60_RS20085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS20090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU60_RS20090 PF12833 Helix-turn-helix domain ISU60_RS20090 PF02805 Metal binding domain of Ada ISU60_RS20090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU60_RS20095 PF00588 SpoU rRNA Methylase family ISU60_RS20100 PF06426 Serine acetyltransferase, N-terminal ISU60_RS20100 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_RS20105 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISU60_RS20105 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISU60_RS20110 PF02556 Preprotein translocase subunit SecB ISU60_RS20115 PF00462 Glutaredoxin ISU60_RS20120 PF00581 Rhodanese-like domain ISU60_RS20125 PF01676 Metalloenzyme superfamily ISU60_RS20125 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ISU60_RS20130 PF01551 Peptidase family M23 ISU60_RS20140 PF00107 Zinc-binding dehydrogenase ISU60_RS20140 PF08240 Alcohol dehydrogenase GroES-like domain ISU60_RS20145 PF00155 Aminotransferase class I and II ISU60_RS20150 PF01370 NAD dependent epimerase/dehydratase family ISU60_RS20155 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU60_RS20160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU60_RS20165 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISU60_RS20170 PF00535 Glycosyl transferase family 2 ISU60_RS20175 PF01467 Cytidylyltransferase-like ISU60_RS20180 PF06827 Zinc finger found in FPG and IleRS ISU60_RS20180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISU60_RS20180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISU60_RS20185 PF00471 Ribosomal protein L33 ISU60_RS20190 PF00830 Ribosomal L28 family ISU60_RS20195 PF04002 RadC-like JAB domain ISU60_RS20200 PF04127 DNA / pantothenate metabolism flavoprotein ISU60_RS20200 PF02441 Flavoprotein ISU60_RS20205 PF00692 dUTPase ISU60_RS20210 PF00440 Bacterial regulatory proteins, tetR family ISU60_RS20215 PF00156 Phosphoribosyl transferase domain ISU60_RS20220 PF01138 3' exoribonuclease family, domain 1 ISU60_RS20220 PF03725 3' exoribonuclease family, domain 2 ISU60_RS20225 PF08340 Domain of unknown function (DUF1732) ISU60_RS20225 PF03755 YicC-like family, N-terminal region ISU60_RS20230 PF03458 UPF0126 domain ISU60_RS20235 PF01653 NAD-dependent DNA ligase adenylation domain ISU60_RS20235 PF03120 NAD-dependent DNA ligase OB-fold domain ISU60_RS20240 PF00625 Guanylate kinase ISU60_RS20245 PF01192 RNA polymerase Rpb6 ISU60_RS20250 PF04607 Region found in RelA / SpoT proteins ISU60_RS20250 PF02824 TGS domain ISU60_RS20250 PF13291 ACT domain ISU60_RS20255 PF00588 SpoU rRNA Methylase family ISU60_RS20255 PF12105 SpoU, rRNA methylase, C-terminal ISU60_RS20260 PF00270 DEAD/DEAH box helicase ISU60_RS20260 PF00271 Helicase conserved C-terminal domain ISU60_RS20260 PF17191 RecG wedge domain ISU60_RS20270 PF03616 Sodium/glutamate symporter ISU60_RS20275 PF00860 Permease family ISU60_RS20280 PF05170 AsmA family ISU60_RS20285 PF09500 Putative thioesterase (yiiD_Cterm) ISU60_RS20285 PF00583 Acetyltransferase (GNAT) family ISU60_RS20290 PF00665 Integrase core domain ISU60_RS20290 PF02796 Helix-turn-helix domain of resolvase ISU60_RS20295 PF01695 IstB-like ATP binding protein ISU60_RS20300 PF02580 D-Tyr-tRNA(Tyr) deacylase ISU60_RS20305 PF03631 Virulence factor BrkB ISU60_RS20310 PF13419 Haloacid dehalogenase-like hydrolase ISU60_RS20315 PF00009 Elongation factor Tu GTP binding domain ISU60_RS20315 PF03144 Elongation factor Tu domain 2 ISU60_RS20315 PF00679 Elongation factor G C-terminus ISU60_RS20320 PF03951 Glutamine synthetase, beta-Grasp domain ISU60_RS20320 PF00120 Glutamine synthetase, catalytic domain ISU60_RS20325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU60_RS20325 PF00512 His Kinase A (phospho-acceptor) domain ISU60_RS20325 PF00989 PAS fold ISU60_RS20330 PF02954 Bacterial regulatory protein, Fis family ISU60_RS20330 PF00158 Sigma-54 interaction domain ISU60_RS20330 PF00072 Response regulator receiver domain ISU60_RS20335 PF04055 Radical SAM superfamily ISU60_RS20335 PF06969 HemN C-terminal domain ISU60_RS20340 PF04220 Der GTPase activator (YihI) ISU60_RS20345 PF01926 50S ribosome-binding GTPase ISU60_RS20350 PF01797 Transposase IS200 like ISU60_RS20355 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU60_RS20355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU60_RS20355 PF00476 DNA polymerase family A ISU60_RS20355 PF01612 3'-5' exonuclease ISU60_RS20360 PF01323 DSBA-like thioredoxin domain ISU60_RS20365 PF01636 Phosphotransferase enzyme family ISU60_RS20370 PF06288 Protein of unknown function (DUF1040) ISU60_RS20375 PF12804 MobA-like NTP transferase domain ISU60_RS20380 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ISU60_RS20385 PF00872 Transposase, Mutator family ISU60_RS20410 PF00392 Bacterial regulatory proteins, gntR family ISU60_RS20410 PF07729 FCD domain ISU60_RS20415 PF07690 Major Facilitator Superfamily ISU60_RS20430 PF00294 pfkB family carbohydrate kinase ISU60_RS20435 PF05025 RbsD / FucU transport protein family ISU60_RS20440 PF02705 K+ potassium transporter ISU60_RS20445 PF07728 AAA domain (dynein-related subfamily) ISU60_RS20445 PF17868 AAA lid domain ISU60_RS20445 PF12592 Protein of unknown function (DUF3763) ISU60_RS20450 PF05762 VWA domain containing CoxE-like protein ISU60_RS20455 PF03590 Aspartate-ammonia ligase ISU60_RS20460 PF01037 Lrp/AsnC ligand binding domain ISU60_RS20465 PF00258 Flavodoxin ISU60_RS20470 PF13932 GidA associated domain ISU60_RS20470 PF01134 Glucose inhibited division protein A ISU60_RS20475 PF02527 rRNA small subunit methyltransferase G ISU60_RS20480 PF03899 ATP synthase I chain ISU60_RS20485 PF00119 ATP synthase A chain ISU60_RS20490 PF00137 ATP synthase subunit C ISU60_RS20495 PF00430 ATP synthase B/B' CF(0) ISU60_RS20500 PF00213 ATP synthase delta (OSCP) subunit ISU60_RS20505 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU60_RS20505 PF00306 ATP synthase alpha/beta chain, C terminal domain ISU60_RS20505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_RS20510 PF00231 ATP synthase ISU60_RS20515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU60_RS20515 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU60_RS20520 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISU60_RS20520 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISU60_RS20525 PF12804 MobA-like NTP transferase domain ISU60_RS20525 PF00132 Bacterial transferase hexapeptide (six repeats) ISU60_RS20530 PF01380 SIS domain ISU60_RS20535 PF12849 PBP superfamily domain ISU60_RS20540 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS20545 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS20550 PF00005 ABC transporter ISU60_RS20555 PF01895 PhoU domain ISU60_RS20565 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU60_RS20570 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS20575 PF00528 Binding-protein-dependent transport system inner membrane component ISU60_RS20580 PF13419 Haloacid dehalogenase-like hydrolase ISU60_RS20590 PF00860 Permease family ISU60_RS20610 PF07055 Enoyl reductase FAD binding domain ISU60_RS20610 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISU60_RS20610 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISU60_RS20615 PF01926 50S ribosome-binding GTPase ISU60_RS20615 PF10396 GTP-binding protein TrmE N-terminus ISU60_RS20615 PF12631 MnmE helical domain ISU60_RS20620 PF14849 YidC periplasmic domain ISU60_RS20620 PF02096 60Kd inner membrane protein ISU60_RS20625 PF01809 Putative membrane protein insertion efficiency factor ISU60_RS20630 PF00825 Ribonuclease P ISU60_RS20635 PF00468 Ribosomal protein L34