##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM1380v1 #!genome-build-accession NCBI_Assembly:GCF_000013805.1 ##sequence-region NC_008149.1 1 4534590 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=377628 NC_008149.1 RefSeq region 1 4534590 . + . ID=id0;Dbxref=taxon:377628;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=Nepal516 NC_008149.1 RefSeq gene 270 710 . - . ID=gene0;Name=YPN_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00005;old_locus_tag=YPN_0001 NC_008149.1 Protein Homology CDS 270 710 . - 0 ID=cds0;Parent=gene0;Dbxref=Genbank:WP_002212258.1;Name=WP_002212258.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=FMN-binding protein MioC;protein_id=WP_002212258.1;transl_table=11 NC_008149.1 RefSeq gene 803 1264 . - . ID=gene1;Name=YPN_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00010;old_locus_tag=YPN_0002 NC_008149.1 Protein Homology CDS 803 1264 . - 0 ID=cds1;Parent=gene1;Dbxref=Genbank:WP_002212257.1;Name=WP_002212257.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212257.1;transl_table=11 NC_008149.1 RefSeq gene 1434 2426 . + . ID=gene2;Name=YPN_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00015;old_locus_tag=YPN_0003 NC_008149.1 Protein Homology CDS 1434 2426 . + 0 ID=cds2;Parent=gene2;Dbxref=Genbank:WP_002212256.1;Name=WP_002212256.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11 NC_008149.1 RefSeq gene 2525 3991 . - . ID=gene3;Name=YPN_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00020;old_locus_tag=YPN_0004 NC_008149.1 Protein Homology CDS 2525 3991 . - 0 ID=cds3;Parent=gene3;Dbxref=Genbank:WP_002212255.1;Name=WP_002212255.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;product=protein ViaA;protein_id=WP_002212255.1;transl_table=11 NC_008149.1 RefSeq gene 3995 5548 . - . ID=gene4;Name=YPN_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00025;old_locus_tag=YPN_0005 NC_008149.1 Protein Homology CDS 3995 5548 . - 0 ID=cds4;Parent=gene4;Dbxref=Genbank:WP_002212254.1;Name=WP_002212254.1;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase;gbkey=CDS;product=ATPase RavA;protein_id=WP_002212254.1;transl_table=11 NC_008149.1 RefSeq gene 5822 7690 . + . ID=gene5;Name=trkD;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=YPN_RS00030;old_locus_tag=YPN_0006 NC_008149.1 Protein Homology CDS 5822 7690 . + 0 ID=cds5;Parent=gene5;Dbxref=Genbank:WP_002212253.1;Name=WP_002212253.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=low affinity potassium transport system protein kup;protein_id=WP_002212253.1;transl_table=11 NC_008149.1 RefSeq gene 7895 8314 . + . ID=gene6;Name=YPN_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00035;old_locus_tag=YPN_0007 NC_008149.1 Protein Homology CDS 7895 8314 . + 0 ID=cds6;Parent=gene6;Dbxref=Genbank:WP_002212252.1;Name=WP_002212252.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11 NC_008149.1 RefSeq gene 8365 9291 . + . ID=gene7;Name=YPN_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00040;old_locus_tag=YPN_0008 NC_008149.1 Protein Homology CDS 8365 9291 . + 0 ID=cds7;Parent=gene7;Dbxref=Genbank:WP_002212251.1;Name=WP_002212251.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;product=ribokinase;protein_id=WP_002212251.1;transl_table=11 NC_008149.1 RefSeq gene 9344 9514 . + . ID=gene8;Name=YPN_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00045;old_locus_tag=YPN_0009 NC_008149.1 Protein Homology CDS 9344 9514 . + 0 ID=cds8;Parent=gene8;Dbxref=Genbank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002215906.1;transl_table=11 NC_008149.1 RefSeq gene 9511 10935 . - . ID=gene9;Name=YPN_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00050;old_locus_tag=YPN_0010 NC_008149.1 Protein Homology CDS 9511 10935 . - 0 ID=cds9;Parent=gene9;Dbxref=Genbank:WP_002212250.1;Name=WP_002212250.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002212250.1;transl_table=11 NC_008149.1 RefSeq gene 11015 11704 . - . ID=gene10;Name=YPN_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00055;old_locus_tag=YPN_0011 NC_008149.1 Protein Homology CDS 11015 11704 . - 0 ID=cds10;Parent=gene10;Dbxref=Genbank:WP_002215905.1;Name=WP_002215905.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002215905.1;transl_table=11 NC_008149.1 RefSeq repeat_region 11821 17409 . + . ID=id1;gbkey=repeat_region NC_008149.1 RefSeq gene 12261 13809 . + . ID=gene11;Name=YPN_RS00060;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS00060;old_locus_tag=YPN_r001 NC_008149.1 RefSeq rRNA 12261 13809 . + . ID=rna0;Parent=gene11;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq exon 12261 13809 . + . ID=id2;Parent=rna0;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq gene 13943 14018 . + . ID=gene12;Name=YPN_RS00065;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS00065;old_locus_tag=YPN_r002 NC_008149.1 tRNAscan-SE tRNA 13943 14018 . + . ID=rna1;Parent=gene12;anticodon=(pos:13977..13979);gbkey=tRNA;product=tRNA-Glu NC_008149.1 tRNAscan-SE exon 13943 14018 . + . ID=id3;Parent=rna1;anticodon=(pos:13977..13979);gbkey=tRNA;product=tRNA-Glu NC_008149.1 RefSeq gene 14262 17195 . + . ID=gene13;Name=YPN_RS00070;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS00070;old_locus_tag=YPN_r003 NC_008149.1 RefSeq rRNA 14262 17195 . + . ID=rna2;Parent=gene13;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq exon 14262 17195 . + . ID=id4;Parent=rna2;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq gene 17287 17402 . + . ID=gene14;Name=YPN_RS00075;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS00075;old_locus_tag=YPN_r004 NC_008149.1 cmsearch rRNA 17287 17402 . + . ID=rna3;Parent=gene14;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 cmsearch exon 17287 17402 . + . ID=id5;Parent=rna3;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 RefSeq gene 17418 17493 . + . ID=gene15;Name=YPN_RS00080;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS00080;old_locus_tag=YPN_r005 NC_008149.1 tRNAscan-SE tRNA 17418 17493 . + . ID=rna4;Parent=gene15;anticodon=(pos:17451..17453);gbkey=tRNA;product=tRNA-Thr NC_008149.1 tRNAscan-SE exon 17418 17493 . + . ID=id6;Parent=rna4;anticodon=(pos:17451..17453);gbkey=tRNA;product=tRNA-Thr NC_008149.1 RefSeq repeat_region 17526 17659 . + . ID=id7;gbkey=repeat_region NC_008149.1 RefSeq gene 17534 17649 . + . ID=gene16;Name=YPN_RS00085;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS00085;old_locus_tag=YPN_r005a NC_008149.1 cmsearch rRNA 17534 17649 . + . ID=rna5;Parent=gene16;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 cmsearch exon 17534 17649 . + . ID=id8;Parent=rna5;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 RefSeq gene 18049 18321 . - . ID=gene17;Name=YPN_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00090 NC_008149.1 Protein Homology CDS 18049 18321 . - 0 ID=cds11;Parent=gene17;Dbxref=Genbank:WP_002430138.1;Name=WP_002430138.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430138.1;transl_table=11 NC_008149.1 RefSeq gene 18389 19318 . + . ID=gene18;Name=YPN_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00095;old_locus_tag=YPN_0012 NC_008149.1 Protein Homology CDS 18389 19318 . + 0 ID=cds12;Parent=gene18;Dbxref=Genbank:WP_002212076.1;Name=WP_002212076.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=WP_002212076.1;transl_table=11 NC_008149.1 RefSeq gene 19738 21336 . + . ID=gene19;Name=YPN_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00100;old_locus_tag=YPN_0014 NC_008149.1 Protein Homology CDS 19738 21336 . + 0 ID=cds13;Parent=gene19;Dbxref=Genbank:WP_002212077.1;Name=WP_002212077.1;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;gbkey=CDS;product=malate synthase;protein_id=WP_002212077.1;transl_table=11 NC_008149.1 RefSeq gene 21383 22690 . + . ID=gene20;Name=YPN_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00105;old_locus_tag=YPN_0015 NC_008149.1 Protein Homology CDS 21383 22690 . + 0 ID=cds14;Parent=gene20;Dbxref=Genbank:WP_002212078.1;Name=WP_002212078.1;gbkey=CDS;product=isocitrate lyase;protein_id=WP_002212078.1;transl_table=11 NC_008149.1 RefSeq repeat_region 22734 22908 . + . ID=id9;gbkey=repeat_region NC_008149.1 RefSeq gene 22946 24673 . + . ID=gene21;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=YPN_RS00110;old_locus_tag=YPN_0016 NC_008149.1 Protein Homology CDS 22946 24673 . + 0 ID=cds15;Parent=gene21;Dbxref=Genbank:WP_002212079.1;Name=WP_002212079.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase;protein_id=WP_002212079.1;transl_table=11 NC_008149.1 RefSeq gene 24793 25305 . - . ID=gene22;Name=YPN_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00115;old_locus_tag=YPN_0017 NC_008149.1 Protein Homology CDS 24793 25305 . - 0 ID=cds16;Parent=gene22;Dbxref=Genbank:WP_002355282.1;Name=WP_002355282.1;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002355282.1;transl_table=11 NC_008149.1 RefSeq gene 25290 25637 . - . ID=gene23;Name=YPN_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00120 NC_008149.1 Protein Homology CDS 25290 25637 . - 0 ID=cds17;Parent=gene23;Dbxref=Genbank:WP_002228764.1;Name=WP_002228764.1;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002228764.1;transl_table=11 NC_008149.1 RefSeq gene 25852 29547 . + . ID=gene24;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=YPN_RS00125;old_locus_tag=YPN_0018 NC_008149.1 Protein Homology CDS 25852 29547 . + 0 ID=cds18;Parent=gene24;Dbxref=Genbank:WP_002212080.1;Name=WP_002212080.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=WP_002212080.1;transl_table=11 NC_008149.1 RefSeq gene 29643 34550 . - . ID=gene25;Name=YPN_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00130;old_locus_tag=YPN_0019 NC_008149.1 Protein Homology CDS 29643 34550 . - 0 ID=cds19;Parent=gene25;Dbxref=Genbank:WP_002212081.1;Name=WP_002212081.1;gbkey=CDS;product=hemolysin;protein_id=WP_002212081.1;transl_table=11 NC_008149.1 RefSeq gene 34620 36119 . - . ID=gene26;Name=YPN_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00135;old_locus_tag=YPN_0020 NC_008149.1 Protein Homology CDS 34620 36119 . - 0 ID=cds20;Parent=gene26;Dbxref=Genbank:WP_002228765.1;Name=WP_002228765.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_002228765.1;transl_table=11 NC_008149.1 RefSeq gene 36877 38262 . - . ID=gene27;Name=YPN_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00140;old_locus_tag=YPN_0022 NC_008149.1 Protein Homology CDS 36877 38262 . - 0 ID=cds21;Parent=gene27;Dbxref=Genbank:WP_002212084.1;Name=WP_002212084.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;product=aspartate kinase;protein_id=WP_002212084.1;transl_table=11 NC_008149.1 RefSeq gene 38632 40278 . + . ID=gene28;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=YPN_RS00145;old_locus_tag=YPN_0023 NC_008149.1 Protein Homology CDS 38632 40278 . + 0 ID=cds22;Parent=gene28;Dbxref=Genbank:WP_002212085.1;Name=WP_002212085.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_002212085.1;transl_table=11 NC_008149.1 RefSeq gene 40413 40820 . + . ID=gene29;Name=YPN_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00150;old_locus_tag=YPN_0024 NC_008149.1 Protein Homology CDS 40413 40820 . + 0 ID=cds23;Parent=gene29;Dbxref=Genbank:WP_002212086.1;Name=WP_002212086.1;gbkey=CDS;product=protein PsiE;protein_id=WP_002212086.1;transl_table=11 NC_008149.1 RefSeq gene 40963 41853 . - . ID=gene30;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=YPN_RS00155;old_locus_tag=YPN_0025 NC_008149.1 Protein Homology CDS 40963 41853 . - 0 ID=cds24;Parent=gene30;Dbxref=Genbank:WP_002212087.1;Name=WP_002212087.1;Note=with MalKFE is involved in the transport of maltose into the cell;gbkey=CDS;gene=malG;product=maltose ABC transporter permease;protein_id=WP_002212087.1;transl_table=11 NC_008149.1 RefSeq gene 41867 43444 . - . ID=gene31;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=YPN_RS00160;old_locus_tag=YPN_0026 NC_008149.1 Protein Homology CDS 41867 43444 . - 0 ID=cds25;Parent=gene31;Dbxref=Genbank:WP_002212088.1;Name=WP_002212088.1;Note=with MalKGE is involved in maltose transport into the cell;gbkey=CDS;gene=malF;product=maltose transporter membrane protein;protein_id=WP_002212088.1;transl_table=11 NC_008149.1 RefSeq gene 43631 44842 . - . ID=gene32;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=YPN_RS00165;old_locus_tag=YPN_0027 NC_008149.1 Protein Homology CDS 43631 44842 . - 0 ID=cds26;Parent=gene32;Dbxref=Genbank:WP_002212089.1;Name=WP_002212089.1;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;gbkey=CDS;gene=malE;product=maltose ABC transporter substrate-binding protein;protein_id=WP_002212089.1;transl_table=11 NC_008149.1 RefSeq gene 45430 45666 . + . ID=gene33;Name=YPN_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00170;old_locus_tag=YPN_0028 NC_008149.1 Protein Homology CDS 45430 45666 . + 0 ID=cds27;Parent=gene33;Dbxref=Genbank:WP_002221973.1;Name=WP_002221973.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221973.1;transl_table=11 NC_008149.1 RefSeq gene 45670 46779 . + . ID=gene34;Name=YPN_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00175;old_locus_tag=YPN_0029 NC_008149.1 Protein Homology CDS 45670 46779 . + 0 ID=cds28;Parent=gene34;Dbxref=Genbank:WP_002212091.1;Name=WP_002212091.1;Note=with malEFG is involved in import of maltose/maltodextrin;gbkey=CDS;product=maltose/maltodextrin import ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11 NC_008149.1 RefSeq gene 46850 48121 . + . ID=gene35;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=YPN_RS00180;old_locus_tag=YPN_0030 NC_008149.1 Protein Homology CDS 46850 48121 . + 0 ID=cds29;Parent=gene35;Dbxref=Genbank:WP_002212092.1;Name=WP_002212092.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=WP_002212092.1;transl_table=11 NC_008149.1 RefSeq gene 48362 49273 . + . ID=gene36;Name=YPN_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00185;old_locus_tag=YPN_0031 NC_008149.1 Protein Homology CDS 48362 49273 . + 0 ID=cds30;Parent=gene36;Dbxref=Genbank:WP_002212093.1;Name=WP_002212093.1;gbkey=CDS;product=maltose operon protein;protein_id=WP_002212093.1;transl_table=11 NC_008149.1 RefSeq gene 49744 50022 . + . ID=gene37;Name=YPN_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00190;old_locus_tag=YPN_0032 NC_008149.1 Protein Homology CDS 49744 50022 . + 0 ID=cds31;Parent=gene37;Dbxref=Genbank:WP_002212095.1;Name=WP_002212095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212095.1;transl_table=11 NC_008149.1 RefSeq gene 50174 50692 . - . ID=gene38;Name=YPN_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00195;old_locus_tag=YPN_0033 NC_008149.1 Protein Homology CDS 50174 50692 . - 0 ID=cds32;Parent=gene38;Dbxref=Genbank:WP_002212097.1;Name=WP_002212097.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212097.1;transl_table=11 NC_008149.1 RefSeq gene 51216 51713 . + . ID=gene39;Name=YPN_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00200;old_locus_tag=YPN_0034 NC_008149.1 Protein Homology CDS 51216 51713 . + 0 ID=cds33;Parent=gene39;Dbxref=Genbank:WP_002212098.1;Name=WP_002212098.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212098.1;transl_table=11 NC_008149.1 RefSeq gene 51781 53262 . + . ID=gene40;Name=YPN_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00205;old_locus_tag=YPN_0035 NC_008149.1 Protein Homology CDS 51781 53262 . + 0 ID=cds34;Parent=gene40;Dbxref=Genbank:WP_002212099.1;Name=WP_002212099.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212099.1;transl_table=11 NC_008149.1 RefSeq gene 53269 53709 . + . ID=gene41;Name=YPN_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00210;old_locus_tag=YPN_0036 NC_008149.1 Protein Homology CDS 53269 53709 . + 0 ID=cds35;Parent=gene41;Dbxref=Genbank:WP_002212100.1;Name=WP_002212100.1;gbkey=CDS;product=lysozyme;protein_id=WP_002212100.1;transl_table=11 NC_008149.1 RefSeq gene 53709 54821 . + . ID=gene42;Name=YPN_RS00215;end_range=54821,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS00215;old_locus_tag=YPN_0037;partial=true;pseudo=true NC_008149.1 Protein Homology CDS 53709 54821 . + 0 ID=cds36;Parent=gene42;end_range=54821,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=type VI secretion protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq repeat_region 54792 56445 . + . ID=id10;gbkey=repeat_region NC_008149.1 RefSeq gene 54825 55610 . - . ID=gene43;Name=YPN_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00220;old_locus_tag=YPN_0038 NC_008149.1 Protein Homology CDS 54825 55610 . - 0 ID=cds37;Parent=gene43;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_008149.1 RefSeq gene 55664 56179 . - . ID=gene44;Name=YPN_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00225;old_locus_tag=YPN_0039 NC_008149.1 Protein Homology CDS 55664 56179 . - 0 ID=cds38;Parent=gene44;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_008149.1 RefSeq gene 56921 59557 . - . ID=gene45;Name=YPN_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00230;old_locus_tag=YPN_0040 NC_008149.1 Protein Homology CDS 56921 59557 . - 0 ID=cds39;Parent=gene45;Dbxref=Genbank:WP_002209491.1;Name=WP_002209491.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=WP_002209491.1;transl_table=11 NC_008149.1 RefSeq gene 59931 61094 . - . ID=gene46;Name=YPN_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00235;old_locus_tag=YPN_0041 NC_008149.1 Protein Homology CDS 59931 61094 . - 0 ID=cds40;Parent=gene46;Dbxref=Genbank:WP_002223919.1;Name=WP_002223919.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11 NC_008149.1 RefSeq gene 61345 62349 . + . ID=gene47;Name=YPN_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00240;old_locus_tag=YPN_0042 NC_008149.1 Protein Homology CDS 61345 62349 . + 0 ID=cds41;Parent=gene47;Dbxref=Genbank:WP_002209489.1;Name=WP_002209489.1;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_002209489.1;transl_table=11 NC_008149.1 RefSeq gene 62518 63291 . + . ID=gene48;Name=YPN_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00245;old_locus_tag=YPN_0043 NC_008149.1 Protein Homology CDS 62518 63291 . + 0 ID=cds42;Parent=gene48;Dbxref=Genbank:WP_002209488.1;Name=WP_002209488.1;gbkey=CDS;product=acetylglutamate kinase;protein_id=WP_002209488.1;transl_table=11 NC_008149.1 RefSeq gene 63458 64831 . + . ID=gene49;Name=YPN_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00250;old_locus_tag=YPN_0044 NC_008149.1 Protein Homology CDS 63458 64831 . + 0 ID=cds43;Parent=gene49;Dbxref=Genbank:WP_002209487.1;Name=WP_002209487.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;product=argininosuccinate lyase;protein_id=WP_002209487.1;transl_table=11 NC_008149.1 RefSeq gene 64994 65119 . - . ID=gene50;Name=YPN_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00255 NC_008149.1 Protein Homology CDS 64994 65119 . - 0 ID=cds44;Parent=gene50;Dbxref=Genbank:WP_002209486.1;Name=WP_002209486.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209486.1;transl_table=11 NC_008149.1 RefSeq gene 65430 67922 . + . ID=gene51;Name=YPN_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00260;old_locus_tag=YPN_0045 NC_008149.1 Protein Homology CDS 65430 67922 . + 0 ID=cds45;Parent=gene51;Dbxref=Genbank:WP_002209485.1;Name=WP_002209485.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002209485.1;transl_table=11 NC_008149.1 RefSeq gene 68144 68761 . + . ID=gene52;Name=YPN_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00265;old_locus_tag=YPN_0046 NC_008149.1 Protein Homology CDS 68144 68761 . + 0 ID=cds46;Parent=gene52;Dbxref=Genbank:WP_002209484.1;Name=WP_002209484.1;gbkey=CDS;product=hemophore HasA;protein_id=WP_002209484.1;transl_table=11 NC_008149.1 RefSeq gene 68927 70735 . + . ID=gene53;Name=YPN_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00270;old_locus_tag=YPN_0047 NC_008149.1 Protein Homology CDS 68927 70735 . + 0 ID=cds47;Parent=gene53;Dbxref=Genbank:WP_002209483.1;Name=WP_002209483.1;gbkey=CDS;product=peptidase;protein_id=WP_002209483.1;transl_table=11 NC_008149.1 RefSeq gene 70811 72139 . + . ID=gene54;Name=YPN_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00275;old_locus_tag=YPN_0048 NC_008149.1 Protein Homology CDS 70811 72139 . + 0 ID=cds48;Parent=gene54;Dbxref=Genbank:WP_002209482.1;Name=WP_002209482.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002209482.1;transl_table=11 NC_008149.1 RefSeq gene 72204 73007 . + . ID=gene55;Name=YPN_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00280;old_locus_tag=YPN_0049 NC_008149.1 Protein Homology CDS 72204 73007 . + 0 ID=cds49;Parent=gene55;Dbxref=Genbank:WP_002209481.1;Name=WP_002209481.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002209481.1;transl_table=11 NC_008149.1 RefSeq gene 73123 74586 . - . ID=gene56;Name=YPN_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00285;old_locus_tag=YPN_0050 NC_008149.1 Protein Homology CDS 73123 74586 . - 0 ID=cds50;Parent=gene56;Dbxref=Genbank:WP_002209480.1;Name=WP_002209480.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209480.1;transl_table=11 NC_008149.1 RefSeq gene 74681 75412 . - . ID=gene57;Name=YPN_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00290;old_locus_tag=YPN_0051 NC_008149.1 Protein Homology CDS 74681 75412 . - 0 ID=cds51;Parent=gene57;Dbxref=Genbank:WP_002209479.1;Name=WP_002209479.1;gbkey=CDS;product=glutathione amide-dependent peroxidase;protein_id=WP_002209479.1;transl_table=11 NC_008149.1 RefSeq gene 75559 76476 . + . ID=gene58;Name=YPN_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00295;old_locus_tag=YPN_0052 NC_008149.1 Protein Homology CDS 75559 76476 . + 0 ID=cds52;Parent=gene58;Dbxref=Genbank:WP_002209478.1;Name=WP_002209478.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209478.1;transl_table=11 NC_008149.1 RefSeq gene 76459 77859 . - . ID=gene59;Name=YPN_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00300;old_locus_tag=YPN_0053 NC_008149.1 Protein Homology CDS 76459 77859 . - 0 ID=cds53;Parent=gene59;Dbxref=Genbank:WP_002209477.1;Name=WP_002209477.1;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=WP_002209477.1;transl_table=11 NC_008149.1 RefSeq gene 78077 78712 . + . ID=gene60;Name=YPN_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00305;old_locus_tag=YPN_0054 NC_008149.1 Protein Homology CDS 78077 78712 . + 0 ID=cds54;Parent=gene60;Dbxref=Genbank:WP_002209476.1;Name=WP_002209476.1;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209476.1;transl_table=11 NC_008149.1 RefSeq gene 78725 79132 . + . ID=gene61;Name=YPN_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00310;old_locus_tag=YPN_0055 NC_008149.1 Protein Homology CDS 78725 79132 . + 0 ID=cds55;Parent=gene61;Dbxref=Genbank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209475.1;transl_table=11 NC_008149.1 RefSeq gene 79266 80369 . - . ID=gene62;Name=YPN_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00315;old_locus_tag=YPN_0056 NC_008149.1 Protein Homology CDS 79266 80369 . - 0 ID=cds56;Parent=gene62;Dbxref=Genbank:WP_002209474.1;Name=WP_002209474.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA/tmRNA (uracil-C(5))-methyltransferase;protein_id=WP_002209474.1;transl_table=11 NC_008149.1 RefSeq gene 80368 80613 . + . ID=gene63;Name=YPN_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00320 NC_008149.1 Protein Homology CDS 80368 80613 . + 0 ID=cds57;Parent=gene63;Dbxref=Genbank:WP_002215343.1;Name=WP_002215343.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215343.1;transl_table=11 NC_008149.1 RefSeq gene 80849 82726 . + . ID=gene64;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=YPN_RS00325;old_locus_tag=YPN_0057 NC_008149.1 Protein Homology CDS 80849 82726 . + 0 ID=cds58;Parent=gene64;Dbxref=Genbank:WP_002228170.1;Name=WP_002228170.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12 transporter BtuB;protein_id=WP_002228170.1;transl_table=11 NC_008149.1 RefSeq gene 82671 83534 . + . ID=gene65;Name=YPN_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00330;old_locus_tag=YPN_0058 NC_008149.1 Protein Homology CDS 82671 83534 . + 0 ID=cds59;Parent=gene65;Dbxref=Genbank:WP_002228171.1;Name=WP_002228171.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_002228171.1;transl_table=11 NC_008149.1 RefSeq repeat_region 83556 89332 . + . ID=id11;gbkey=repeat_region NC_008149.1 RefSeq gene 83988 85536 . + . ID=gene66;Name=YPN_RS00335;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS00335;old_locus_tag=YPN_r007 NC_008149.1 RefSeq rRNA 83988 85536 . + . ID=rna6;Parent=gene66;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq exon 83988 85536 . + . ID=id12;Parent=rna6;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq gene 85670 85745 . + . ID=gene67;Name=YPN_RS00340;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS00340;old_locus_tag=YPN_r008 NC_008149.1 tRNAscan-SE tRNA 85670 85745 . + . ID=rna7;Parent=gene67;anticodon=(pos:85704..85706);gbkey=tRNA;product=tRNA-Glu NC_008149.1 tRNAscan-SE exon 85670 85745 . + . ID=id13;Parent=rna7;anticodon=(pos:85704..85706);gbkey=tRNA;product=tRNA-Glu NC_008149.1 RefSeq gene 85989 88922 . + . ID=gene68;Name=YPN_RS00345;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS00345;old_locus_tag=YPN_r009 NC_008149.1 RefSeq rRNA 85989 88922 . + . ID=rna8;Parent=gene68;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq exon 85989 88922 . + . ID=id14;Parent=rna8;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq gene 89014 89129 . + . ID=gene69;Name=YPN_RS00350;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS00350;old_locus_tag=YPN_r010 NC_008149.1 cmsearch rRNA 89014 89129 . + . ID=rna9;Parent=gene69;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 cmsearch exon 89014 89129 . + . ID=id15;Parent=rna9;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 RefSeq gene 89255 89331 . + . ID=gene70;Name=YPN_RS00355;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS00355;old_locus_tag=YPN_r011 NC_008149.1 tRNAscan-SE tRNA 89255 89331 . + . ID=rna10;Parent=gene70;anticodon=(pos:89289..89291);gbkey=tRNA;product=tRNA-Asp NC_008149.1 tRNAscan-SE exon 89255 89331 . + . ID=id16;Parent=rna10;anticodon=(pos:89289..89291);gbkey=tRNA;product=tRNA-Asp NC_008149.1 RefSeq gene 89340 89415 . + . ID=gene71;Name=YPN_RS00360;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS00360;old_locus_tag=YPN_r012 NC_008149.1 tRNAscan-SE tRNA 89340 89415 . + . ID=rna11;Parent=gene71;anticodon=(pos:89373..89375);gbkey=tRNA;product=tRNA-Trp NC_008149.1 tRNAscan-SE exon 89340 89415 . + . ID=id17;Parent=rna11;anticodon=(pos:89373..89375);gbkey=tRNA;product=tRNA-Trp NC_008149.1 RefSeq gene 89542 89752 . - . ID=gene72;Name=YPN_RS00365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS00365;pseudo=true NC_008149.1 Protein Homology CDS 89542 89752 . - 0 ID=cds60;Parent=gene72;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 90393 91349 . + . ID=gene73;Name=YPN_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00370;old_locus_tag=YPN_0059 NC_008149.1 Protein Homology CDS 90393 91349 . + 0 ID=cds61;Parent=gene73;Dbxref=Genbank:WP_002212024.1;Name=WP_002212024.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002212024.1;transl_table=11 NC_008149.1 RefSeq gene 91435 92925 . + . ID=gene74;Name=YPN_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00375;old_locus_tag=YPN_0060 NC_008149.1 Protein Homology CDS 91435 92925 . + 0 ID=cds62;Parent=gene74;Dbxref=Genbank:WP_002212023.1;Name=WP_002212023.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002212023.1;transl_table=11 NC_008149.1 RefSeq gene 92958 93956 . + . ID=gene75;Name=YPN_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00380;old_locus_tag=YPN_0061 NC_008149.1 Protein Homology CDS 92958 93956 . + 0 ID=cds63;Parent=gene75;Dbxref=Genbank:WP_002220992.1;Name=WP_002220992.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002220992.1;transl_table=11 NC_008149.1 RefSeq gene 93956 94948 . + . ID=gene76;Name=YPN_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00385;old_locus_tag=YPN_0062 NC_008149.1 Protein Homology CDS 93956 94948 . + 0 ID=cds64;Parent=gene76;Dbxref=Genbank:WP_002212021.1;Name=WP_002212021.1;Note=membrane component of a putative sugar ABC transporter system;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002212021.1;transl_table=11 NC_008149.1 RefSeq gene 94935 95816 . - . ID=gene77;Name=YPN_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00390;old_locus_tag=YPN_0063 NC_008149.1 Protein Homology CDS 94935 95816 . - 0 ID=cds65;Parent=gene77;Dbxref=Genbank:WP_002212020.1;Name=WP_002212020.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212020.1;transl_table=11 NC_008149.1 RefSeq gene 95935 96273 . + . ID=gene78;Name=YPN_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00395;old_locus_tag=YPN_0064 NC_008149.1 Protein Homology CDS 95935 96273 . + 0 ID=cds66;Parent=gene78;Dbxref=Genbank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212019.1;transl_table=11 NC_008149.1 RefSeq gene 96530 98053 . - . ID=gene79;Name=YPN_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00400;old_locus_tag=YPN_0065 NC_008149.1 Protein Homology CDS 96530 98053 . - 0 ID=cds67;Parent=gene79;Dbxref=Genbank:WP_002228240.1;Name=WP_002228240.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;product=ATPase;protein_id=WP_002228240.1;transl_table=11 NC_008149.1 RefSeq gene 98676 100322 . + . ID=gene80;Name=YPN_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00405;old_locus_tag=YPN_0066 NC_008149.1 Protein Homology CDS 98676 100322 . + 0 ID=cds68;Parent=gene80;Dbxref=Genbank:WP_002212017.1;Name=WP_002212017.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002212017.1;transl_table=11 NC_008149.1 RefSeq gene 100319 100576 . + . ID=gene81;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=YPN_RS00410;old_locus_tag=YPN_0067 NC_008149.1 Protein Homology CDS 100319 100576 . + 0 ID=cds69;Parent=gene81;Dbxref=Genbank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase;protein_id=WP_002212016.1;transl_table=11 NC_008149.1 RefSeq gene 100599 101525 . + . ID=gene82;Name=YPN_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00415;old_locus_tag=YPN_0068 NC_008149.1 Protein Homology CDS 100599 101525 . + 0 ID=cds70;Parent=gene82;Dbxref=Genbank:WP_002212015.1;Name=WP_002212015.1;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=WP_002212015.1;transl_table=11 NC_008149.1 RefSeq gene 101836 103686 . + . ID=gene83;Name=YPN_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00420;old_locus_tag=YPN_0069 NC_008149.1 Protein Homology CDS 101836 103686 . + 0 ID=cds71;Parent=gene83;Dbxref=Genbank:WP_002212014.1;Name=WP_002212014.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=WP_002212014.1;transl_table=11 NC_008149.1 RefSeq gene 103692 105236 . + . ID=gene84;Name=YPN_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00425;old_locus_tag=YPN_0070 NC_008149.1 Protein Homology CDS 103692 105236 . + 0 ID=cds72;Parent=gene84;Dbxref=Genbank:WP_002212013.1;Name=WP_002212013.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;product=threonine dehydratase;protein_id=WP_002212013.1;transl_table=11 NC_008149.1 RefSeq gene 105367 105831 . - . ID=gene85;Name=YPN_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00430;old_locus_tag=YPN_0071 NC_008149.1 Protein Homology CDS 105367 105831 . - 0 ID=cds73;Parent=gene85;Dbxref=Genbank:WP_002216998.1;Name=WP_002216998.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216998.1;transl_table=11 NC_008149.1 RefSeq repeat_region 105752 106961 . + . ID=id18;gbkey=repeat_region NC_008149.1 RefSeq gene 105911 106372 . - . ID=gene86;Name=YPN_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00435;old_locus_tag=YPN_0072 NC_008149.1 Protein Homology CDS 105911 106372 . - 0 ID=cds74;Parent=gene86;Dbxref=Genbank:WP_002217000.1;Name=WP_002217000.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217000.1;transl_table=11 NC_008149.1 RefSeq gene 106452 106913 . - . ID=gene87;Name=YPN_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00440;old_locus_tag=YPN_0073 NC_008149.1 Protein Homology CDS 106452 106913 . - 0 ID=cds75;Parent=gene87;Dbxref=Genbank:WP_002212010.1;Name=WP_002212010.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212010.1;transl_table=11 NC_008149.1 RefSeq gene 106897 107775 . - . ID=gene88;Name=YPN_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00445;old_locus_tag=YPN_0074 NC_008149.1 Protein Homology CDS 106897 107775 . - 0 ID=cds76;Parent=gene88;Dbxref=Genbank:WP_002228241.1;Name=WP_002228241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228241.1;transl_table=11 NC_008149.1 RefSeq gene 108423 108632 . + . ID=gene89;Name=YPN_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00450;old_locus_tag=YPN_0075 NC_008149.1 Protein Homology CDS 108423 108632 . + 0 ID=cds77;Parent=gene89;Dbxref=Genbank:WP_002212009.1;Name=WP_002212009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212009.1;transl_table=11 NC_008149.1 RefSeq gene 108687 109568 . - . ID=gene90;Name=YPN_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00455;old_locus_tag=YPN_0076 NC_008149.1 Protein Homology CDS 108687 109568 . - 0 ID=cds78;Parent=gene90;Dbxref=Genbank:WP_002212008.1;Name=WP_002212008.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212008.1;transl_table=11 NC_008149.1 RefSeq gene 109854 111332 . + . ID=gene91;Name=YPN_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00460;old_locus_tag=YPN_0077 NC_008149.1 Protein Homology CDS 109854 111332 . + 0 ID=cds79;Parent=gene91;Dbxref=Genbank:WP_002212007.1;Name=WP_002212007.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=WP_002212007.1;transl_table=11 NC_008149.1 RefSeq gene 111513 111713 . + . ID=gene92;Name=YPN_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00465;old_locus_tag=YPN_0078 NC_008149.1 Protein Homology CDS 111513 111713 . + 0 ID=cds80;Parent=gene92;Dbxref=Genbank:WP_002212006.1;Name=WP_002212006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212006.1;transl_table=11 NC_008149.1 RefSeq gene 111921 113351 . + . ID=gene93;Name=YPN_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00470;old_locus_tag=YPN_0079 NC_008149.1 Protein Homology CDS 111921 113351 . + 0 ID=cds81;Parent=gene93;Dbxref=Genbank:WP_002212005.1;Name=WP_002212005.1;gbkey=CDS;product=colicin;protein_id=WP_002212005.1;transl_table=11 NC_008149.1 RefSeq gene 113351 113614 . + . ID=gene94;Name=YPN_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00475;old_locus_tag=YPN_0080 NC_008149.1 Protein Homology CDS 113351 113614 . + 0 ID=cds82;Parent=gene94;Dbxref=Genbank:WP_002212004.1;Name=WP_002212004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212004.1;transl_table=11 NC_008149.1 RefSeq gene 113867 114118 . + . ID=gene95;Name=YPN_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00480 NC_008149.1 Protein Homology CDS 113867 114118 . + 0 ID=cds83;Parent=gene95;Dbxref=Genbank:WP_002215823.1;Name=WP_002215823.1;gbkey=CDS;product=HNH nuclease;protein_id=WP_002215823.1;transl_table=11 NC_008149.1 RefSeq gene 114120 114377 . + . ID=gene96;Name=YPN_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00485;old_locus_tag=YPN_0081 NC_008149.1 Protein Homology CDS 114120 114377 . + 0 ID=cds84;Parent=gene96;Dbxref=Genbank:WP_002212003.1;Name=WP_002212003.1;gbkey=CDS;product=colicin transporter;protein_id=WP_002212003.1;transl_table=11 NC_008149.1 RefSeq gene 114830 114988 . - . ID=gene97;Name=YPN_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00490;old_locus_tag=YPN_0082 NC_008149.1 Protein Homology CDS 114830 114988 . - 0 ID=cds85;Parent=gene97;Dbxref=Genbank:WP_002212002.1;Name=WP_002212002.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212002.1;transl_table=11 NC_008149.1 RefSeq gene 115012 115830 . - . ID=gene98;Name=YPN_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00495;old_locus_tag=YPN_0083 NC_008149.1 Protein Homology CDS 115012 115830 . - 0 ID=cds86;Parent=gene98;Dbxref=Genbank:WP_002215825.1;Name=WP_002215825.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002215825.1;transl_table=11 NC_008149.1 RefSeq gene 115796 117073 . - . ID=gene99;Name=YPN_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00500;old_locus_tag=YPN_0084 NC_008149.1 Protein Homology CDS 115796 117073 . - 0 ID=cds87;Parent=gene99;Dbxref=Genbank:WP_002355452.1;Name=WP_002355452.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002355452.1;transl_table=11 NC_008149.1 RefSeq gene 117180 119807 . - . ID=gene100;Name=YPN_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00505;old_locus_tag=YPN_0085 NC_008149.1 Protein Homology CDS 117180 119807 . - 0 ID=cds88;Parent=gene100;Dbxref=Genbank:WP_002211999.1;Name=WP_002211999.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002211999.1;transl_table=11 NC_008149.1 RefSeq gene 119835 120566 . - . ID=gene101;Name=YPN_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00510;old_locus_tag=YPN_0086 NC_008149.1 Protein Homology CDS 119835 120566 . - 0 ID=cds89;Parent=gene101;Dbxref=Genbank:WP_002211998.1;Name=WP_002211998.1;gbkey=CDS;product=gram-negative pili assembly chaperone;protein_id=WP_002211998.1;transl_table=11 NC_008149.1 RefSeq gene 120630 121160 . - . ID=gene102;Name=YPN_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00515;old_locus_tag=YPN_0087 NC_008149.1 Protein Homology CDS 120630 121160 . - 0 ID=cds90;Parent=gene102;Dbxref=Genbank:WP_002211997.1;Name=WP_002211997.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11 NC_008149.1 RefSeq gene 121471 121647 . + . ID=gene103;Name=YPN_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00520 NC_008149.1 Protein Homology CDS 121471 121647 . + 0 ID=cds91;Parent=gene103;Dbxref=Genbank:WP_002231894.1;Name=WP_002231894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231894.1;transl_table=11 NC_008149.1 RefSeq repeat_region 121933 123250 . + . ID=id19;gbkey=repeat_region NC_008149.1 RefSeq gene 121970 123178 . - . ID=gene104;Name=YPN_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00525;old_locus_tag=YPN_0088 NC_008149.1 Protein Homology CDS 121970 123178 . - 0 ID=cds92;Parent=gene104;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 123275 124066 . - . ID=gene105;Name=YPN_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00530;old_locus_tag=YPN_0089 NC_008149.1 Protein Homology CDS 123275 124066 . - 0 ID=cds93;Parent=gene105;Dbxref=Genbank:WP_002211996.1;Name=WP_002211996.1;gbkey=CDS;product=glutamine cyclotransferase;protein_id=WP_002211996.1;transl_table=11 NC_008149.1 RefSeq gene 124305 124586 . - . ID=gene106;Name=YPN_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00535;old_locus_tag=YPN_0090 NC_008149.1 Protein Homology CDS 124305 124586 . - 0 ID=cds94;Parent=gene106;Dbxref=Genbank:WP_002211995.1;Name=WP_002211995.1;Note=rotamase C%3B accelerates isomerization of the peptidyl prolyl bond;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002211995.1;transl_table=11 NC_008149.1 RefSeq gene 124606 124791 . - . ID=gene107;Name=YPN_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00540 NC_008149.1 Protein Homology CDS 124606 124791 . - 0 ID=cds95;Parent=gene107;Dbxref=Genbank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11 NC_008149.1 RefSeq gene 124790 126811 . + . ID=gene108;Name=YPN_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00545;old_locus_tag=YPN_0091 NC_008149.1 Protein Homology CDS 124790 126811 . + 0 ID=cds96;Parent=gene108;Dbxref=Genbank:WP_002211993.1;Name=WP_002211993.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=WP_002211993.1;transl_table=11 NC_008149.1 RefSeq gene 126979 127989 . - . ID=gene109;Name=YPN_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00550;old_locus_tag=YPN_0092 NC_008149.1 Protein Homology CDS 126979 127989 . - 0 ID=cds97;Parent=gene109;Dbxref=Genbank:WP_002355446.1;Name=WP_002355446.1;gbkey=CDS;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_002355446.1;transl_table=11 NC_008149.1 RefSeq gene 127968 128474 . - . ID=gene110;Name=YPN_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00555;old_locus_tag=YPN_0093 NC_008149.1 Protein Homology CDS 127968 128474 . - 0 ID=cds98;Parent=gene110;Dbxref=Genbank:WP_002228244.1;Name=WP_002228244.1;gbkey=CDS;product=guanosine-5'-triphosphate%2C3'-diphosphatepyrophosphatase;protein_id=WP_002228244.1;transl_table=11 NC_008149.1 RefSeq gene 128478 129764 . - . ID=gene111;Name=YPN_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00560;old_locus_tag=YPN_0094 NC_008149.1 Protein Homology CDS 128478 129764 . - 0 ID=cds99;Parent=gene111;Dbxref=Genbank:WP_002228177.1;Name=WP_002228177.1;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=WP_002228177.1;transl_table=11 NC_008149.1 RefSeq gene 129883 130209 . + . ID=gene112;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=YPN_RS00565;old_locus_tag=YPN_0095 NC_008149.1 Protein Homology CDS 129883 130209 . + 0 ID=cds100;Parent=gene112;Dbxref=Genbank:WP_002211990.1;Name=WP_002211990.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_002211990.1;transl_table=11 NC_008149.1 RefSeq gene 130689 131948 . + . ID=gene113;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=YPN_RS00570;old_locus_tag=YPN_0096 NC_008149.1 Protein Homology CDS 130689 131948 . + 0 ID=cds101;Parent=gene113;Dbxref=Genbank:WP_002211989.1;Name=WP_002211989.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11 NC_008149.1 RefSeq gene 132498 133580 . + . ID=gene114;Name=YPN_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00575;old_locus_tag=YPN_0097 NC_008149.1 Protein Homology CDS 132498 133580 . + 0 ID=cds102;Parent=gene114;Dbxref=Genbank:WP_002216793.1;Name=WP_002216793.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;product=UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_002216793.1;transl_table=11 NC_008149.1 RefSeq gene 133601 134677 . + . ID=gene115;Name=YPN_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00580;old_locus_tag=YPN_0098 NC_008149.1 Protein Homology CDS 133601 134677 . + 0 ID=cds103;Parent=gene115;Dbxref=Genbank:WP_002226022.1;Name=WP_002226022.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002226022.1;transl_table=11 NC_008149.1 RefSeq gene 134958 136088 . + . ID=gene116;Name=YPN_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00585;old_locus_tag=YPN_0099 NC_008149.1 Protein Homology CDS 134958 136088 . + 0 ID=cds104;Parent=gene116;Dbxref=Genbank:WP_002211986.1;Name=WP_002211986.1;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_002211986.1;transl_table=11 NC_008149.1 RefSeq gene 136085 137347 . + . ID=gene117;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=YPN_RS00590;old_locus_tag=YPN_0100 NC_008149.1 Protein Homology CDS 136085 137347 . + 0 ID=cds105;Parent=gene117;Dbxref=Genbank:WP_002211985.1;Name=WP_002211985.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_002211985.1;transl_table=11 NC_008149.1 RefSeq gene 137344 138411 . + . ID=gene118;Name=YPN_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00595;old_locus_tag=YPN_0101 NC_008149.1 Protein Homology CDS 137344 138411 . + 0 ID=cds106;Parent=gene118;Dbxref=Genbank:WP_002211984.1;Name=WP_002211984.1;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_002211984.1;transl_table=11 NC_008149.1 RefSeq gene 138706 139587 . + . ID=gene119;Name=YPN_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00600;old_locus_tag=YPN_0102 NC_008149.1 Protein Homology CDS 138706 139587 . + 0 ID=cds107;Parent=gene119;Dbxref=Genbank:WP_002211983.1;Name=WP_002211983.1;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_002211983.1;transl_table=11 NC_008149.1 RefSeq gene 139565 140302 . + . ID=gene120;Name=YPN_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00605;old_locus_tag=YPN_0103 NC_008149.1 Protein Homology CDS 139565 140302 . + 0 ID=cds108;Parent=gene120;Dbxref=Genbank:WP_002211982.1;Name=WP_002211982.1;gbkey=CDS;product=TDP-fucosamine acetyltransferase;protein_id=WP_002211982.1;transl_table=11 NC_008149.1 RefSeq gene 140304 141434 . + . ID=gene121;Name=YPN_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00610;old_locus_tag=YPN_0104 NC_008149.1 Protein Homology CDS 140304 141434 . + 0 ID=cds109;Parent=gene121;Dbxref=Genbank:WP_002211981.1;Name=WP_002211981.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose aminotransferase;protein_id=WP_002211981.1;transl_table=11 NC_008149.1 RefSeq gene 141436 142692 . + . ID=gene122;Name=YPN_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00615;old_locus_tag=YPN_0105 NC_008149.1 Protein Homology CDS 141436 142692 . + 0 ID=cds110;Parent=gene122;Dbxref=Genbank:WP_002211980.1;Name=WP_002211980.1;Note=involved in the movement of lipid III across the membrane;gbkey=CDS;product=translocase;protein_id=WP_002211980.1;transl_table=11 NC_008149.1 RefSeq gene 142715 143800 . + . ID=gene123;Name=YPN_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00620;old_locus_tag=YPN_0106 NC_008149.1 Protein Homology CDS 142715 143800 . + 0 ID=cds111;Parent=gene123;Dbxref=Genbank:WP_002211979.1;Name=WP_002211979.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;product=TDP-N-acetylfucosamine--lipid II N-acetylfucosaminyltransferase;protein_id=WP_002211979.1;transl_table=11 NC_008149.1 RefSeq gene 143797 145161 . + . ID=gene124;Name=YPN_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00625;old_locus_tag=YPN_0107 NC_008149.1 Protein Homology CDS 143797 145161 . + 0 ID=cds112;Parent=gene124;Dbxref=Genbank:WP_002211978.1;Name=WP_002211978.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;product=polymerase;protein_id=WP_002211978.1;transl_table=11 NC_008149.1 RefSeq gene 145170 145910 . + . ID=gene125;Name=YPN_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00630;old_locus_tag=YPN_0108 NC_008149.1 Protein Homology CDS 145170 145910 . + 0 ID=cds113;Parent=gene125;Dbxref=Genbank:WP_002211977.1;Name=WP_002211977.1;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=WP_002211977.1;transl_table=11 NC_008149.1 RefSeq repeat_region 146184 146309 . + . ID=id20;gbkey=repeat_region NC_008149.1 RefSeq gene 146434 147825 . + . ID=gene126;Name=YPN_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00635;old_locus_tag=YPN_0109 NC_008149.1 Protein Homology CDS 146434 147825 . + 0 ID=cds114;Parent=gene126;Dbxref=Genbank:WP_002220976.1;Name=WP_002220976.1;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220976.1;transl_table=11 NC_008149.1 RefSeq gene 147974 148050 . + . ID=gene127;Name=YPN_RS00640;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS00640;old_locus_tag=YPN_r013 NC_008149.1 tRNAscan-SE tRNA 147974 148050 . + . ID=rna12;Parent=gene127;anticodon=(pos:148008..148010);gbkey=tRNA;product=tRNA-Arg NC_008149.1 tRNAscan-SE exon 147974 148050 . + . ID=id21;Parent=rna12;anticodon=(pos:148008..148010);gbkey=tRNA;product=tRNA-Arg NC_008149.1 RefSeq gene 148134 148209 . + . ID=gene128;Name=YPN_RS00645;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS00645;old_locus_tag=YPN_r014 NC_008149.1 tRNAscan-SE tRNA 148134 148209 . + . ID=rna13;Parent=gene128;anticodon=(pos:148167..148169);gbkey=tRNA;product=tRNA-His NC_008149.1 tRNAscan-SE exon 148134 148209 . + . ID=id22;Parent=rna13;anticodon=(pos:148167..148169);gbkey=tRNA;product=tRNA-His NC_008149.1 RefSeq gene 148226 148312 . + . ID=gene129;Name=YPN_RS00650;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS00650;old_locus_tag=YPN_r015 NC_008149.1 tRNAscan-SE tRNA 148226 148312 . + . ID=rna14;Parent=gene129;anticodon=(pos:148260..148262);gbkey=tRNA;product=tRNA-Leu NC_008149.1 tRNAscan-SE exon 148226 148312 . + . ID=id23;Parent=rna14;anticodon=(pos:148260..148262);gbkey=tRNA;product=tRNA-Leu NC_008149.1 RefSeq gene 148388 148464 . + . ID=gene130;Name=YPN_RS00655;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS00655;old_locus_tag=YPN_r016 NC_008149.1 tRNAscan-SE tRNA 148388 148464 . + . ID=rna15;Parent=gene130;anticodon=(pos:148422..148424);gbkey=tRNA;product=tRNA-Pro NC_008149.1 tRNAscan-SE exon 148388 148464 . + . ID=id24;Parent=rna15;anticodon=(pos:148422..148424);gbkey=tRNA;product=tRNA-Pro NC_008149.1 RefSeq repeat_region 149180 149901 . + . ID=id25;gbkey=repeat_region NC_008149.1 RefSeq gene 149331 149789 . + . ID=gene131;Name=YPN_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00660;old_locus_tag=YPN_0110 NC_008149.1 Protein Homology CDS 149331 149789 . + 0 ID=cds115;Parent=gene131;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 149982 151202 . - . ID=gene132;Name=YPN_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00665;old_locus_tag=YPN_0111 NC_008149.1 Protein Homology CDS 149982 151202 . - 0 ID=cds116;Parent=gene132;Dbxref=Genbank:WP_002211462.1;Name=WP_002211462.1;gbkey=CDS;product=protoheme IX biogenesis protein;protein_id=WP_002211462.1;transl_table=11 NC_008149.1 RefSeq gene 151205 152329 . - . ID=gene133;Name=YPN_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00670;old_locus_tag=YPN_0112 NC_008149.1 Protein Homology CDS 151205 152329 . - 0 ID=cds117;Parent=gene133;Dbxref=Genbank:WP_002211463.1;Name=WP_002211463.1;gbkey=CDS;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211463.1;transl_table=11 NC_008149.1 RefSeq gene 152360 153109 . - . ID=gene134;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=YPN_RS00675;old_locus_tag=YPN_0113 NC_008149.1 Protein Homology CDS 152360 153109 . - 0 ID=cds118;Parent=gene134;Dbxref=Genbank:WP_002211464.1;Name=WP_002211464.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen III methyltransferase;protein_id=WP_002211464.1;transl_table=11 NC_008149.1 RefSeq gene 153106 154047 . - . ID=gene135;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=YPN_RS00680;old_locus_tag=YPN_0114 NC_008149.1 Protein Homology CDS 153106 154047 . - 0 ID=cds119;Parent=gene135;Dbxref=Genbank:WP_002211465.1;Name=WP_002211465.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=WP_002211465.1;transl_table=11 NC_008149.1 RefSeq gene 154541 157093 . + . ID=gene136;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=YPN_RS00685;old_locus_tag=YPN_0116 NC_008149.1 Protein Homology CDS 154541 157093 . + 0 ID=cds120;Parent=gene136;Dbxref=Genbank:WP_002211468.1;Name=WP_002211468.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=WP_002211468.1;transl_table=11 NC_008149.1 RefSeq repeat_region 157130 157302 . + . ID=id26;gbkey=repeat_region NC_008149.1 RefSeq gene 157337 157657 . - . ID=gene137;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=YPN_RS00690;old_locus_tag=YPN_0117 NC_008149.1 Protein Homology CDS 157337 157657 . - 0 ID=cds121;Parent=gene137;Dbxref=Genbank:WP_002211469.1;Name=WP_002211469.1;Note=iron-dependent inhibitor of iron-sulfur cluster formation%3B iron-binding and oxidizing protein%3B defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=protein CyaY;protein_id=WP_002211469.1;transl_table=11 NC_008149.1 RefSeq gene 157809 157997 . + . ID=gene138;Name=YPN_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00695;old_locus_tag=YPN_0118 NC_008149.1 Protein Homology CDS 157809 157997 . + 0 ID=cds122;Parent=gene138;Dbxref=Genbank:WP_002211470.1;Name=WP_002211470.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211470.1;transl_table=11 NC_008149.1 RefSeq gene 158181 159005 . + . ID=gene139;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=YPN_RS00700;old_locus_tag=YPN_0119 NC_008149.1 Protein Homology CDS 158181 159005 . + 0 ID=cds123;Parent=gene139;Dbxref=Genbank:WP_002211471.1;Name=WP_002211471.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11 NC_008149.1 RefSeq gene 159070 159774 . + . ID=gene140;Name=YPN_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00705;old_locus_tag=YPN_0120 NC_008149.1 Protein Homology CDS 159070 159774 . + 0 ID=cds124;Parent=gene140;Dbxref=Genbank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211472.1;transl_table=11 NC_008149.1 RefSeq gene 159771 160682 . + . ID=gene141;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=YPN_RS00710;old_locus_tag=YPN_0121 NC_008149.1 Protein Homology CDS 159771 160682 . + 0 ID=cds125;Parent=gene141;Dbxref=Genbank:WP_002211473.1;Name=WP_002211473.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=tyrosine recombinase XerC;protein_id=WP_002211473.1;transl_table=11 NC_008149.1 RefSeq gene 160682 161398 . + . ID=gene142;Name=YPN_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00715;old_locus_tag=YPN_0122 NC_008149.1 Protein Homology CDS 160682 161398 . + 0 ID=cds126;Parent=gene142;Dbxref=Genbank:WP_002211474.1;Name=WP_002211474.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_002211474.1;transl_table=11 NC_008149.1 RefSeq gene 161500 163662 . + . ID=gene143;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=YPN_RS00720;old_locus_tag=YPN_0123 NC_008149.1 Protein Homology CDS 161500 163662 . + 0 ID=cds127;Parent=gene143;Dbxref=Genbank:WP_002211475.1;Name=WP_002211475.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase;protein_id=WP_002211475.1;transl_table=11 NC_008149.1 RefSeq gene 163776 164462 . - . ID=gene144;Name=YPN_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00725;old_locus_tag=YPN_0124 NC_008149.1 Protein Homology CDS 163776 164462 . - 0 ID=cds128;Parent=gene144;Dbxref=Genbank:WP_002211476.1;Name=WP_002211476.1;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002211476.1;transl_table=11 NC_008149.1 RefSeq gene 164890 166107 . + . ID=gene145;Name=YPN_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00730;old_locus_tag=YPN_0125 NC_008149.1 Protein Homology CDS 164890 166107 . + 0 ID=cds129;Parent=gene145;Dbxref=Genbank:WP_002211477.1;Name=WP_002211477.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211477.1;transl_table=11 NC_008149.1 RefSeq gene 166133 166963 . + . ID=gene146;Name=YPN_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00735;old_locus_tag=YPN_0126 NC_008149.1 Protein Homology CDS 166133 166963 . + 0 ID=cds130;Parent=gene146;Dbxref=Genbank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211478.1;transl_table=11 NC_008149.1 RefSeq gene 167612 168562 . + . ID=gene147;Name=YPN_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00740;old_locus_tag=YPN_0127 NC_008149.1 Protein Homology CDS 167612 168562 . + 0 ID=cds131;Parent=gene147;Dbxref=Genbank:WP_002211480.1;Name=WP_002211480.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_002211480.1;transl_table=11 NC_008149.1 RefSeq gene 168660 169550 . - . ID=gene148;Name=YPN_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00745;old_locus_tag=YPN_0128 NC_008149.1 Protein Homology CDS 168660 169550 . - 0 ID=cds132;Parent=gene148;Dbxref=Genbank:WP_002211481.1;Name=WP_002211481.1;gbkey=CDS;product=chloramphenicol resistance permease RarD;protein_id=WP_002211481.1;transl_table=11 NC_008149.1 RefSeq gene 169637 170107 . - . ID=gene149;Name=YPN_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00750;old_locus_tag=YPN_0129 NC_008149.1 Protein Homology CDS 169637 170107 . - 0 ID=cds133;Parent=gene149;Dbxref=Genbank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211482.1;transl_table=11 NC_008149.1 RefSeq gene 170329 171207 . + . ID=gene150;Name=YPN_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00755;old_locus_tag=YPN_0130 NC_008149.1 Protein Homology CDS 170329 171207 . + 0 ID=cds134;Parent=gene150;Dbxref=Genbank:WP_002211483.1;Name=WP_002211483.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;product=phospholipase A;protein_id=WP_002211483.1;transl_table=11 NC_008149.1 RefSeq gene 171285 173117 . + . ID=gene151;Name=YPN_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00760;old_locus_tag=YPN_0131 NC_008149.1 Protein Homology CDS 171285 173117 . + 0 ID=cds135;Parent=gene151;Dbxref=Genbank:WP_002211484.1;Name=WP_002211484.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11 NC_008149.1 RefSeq gene 173224 173844 . + . ID=gene152;Name=YPN_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00765;old_locus_tag=YPN_0132 NC_008149.1 Protein Homology CDS 173224 173844 . + 0 ID=cds136;Parent=gene152;Dbxref=Genbank:WP_002211485.1;Name=WP_002211485.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002211485.1;transl_table=11 NC_008149.1 RefSeq gene 173895 174515 . - . ID=gene153;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=YPN_RS00770;old_locus_tag=YPN_0133 NC_008149.1 Protein Homology CDS 173895 174515 . - 0 ID=cds137;Parent=gene153;Dbxref=Genbank:WP_002211486.1;Name=WP_002211486.1;gbkey=CDS;gene=rhtB;product=threonine transporter RhtB;protein_id=WP_002211486.1;transl_table=11 NC_008149.1 RefSeq gene 174711 175724 . + . ID=gene154;Name=YPN_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00775;old_locus_tag=YPN_0134 NC_008149.1 Protein Homology CDS 174711 175724 . + 0 ID=cds138;Parent=gene154;Dbxref=Genbank:WP_002211487.1;Name=WP_002211487.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;product=lysophospholipase L2;protein_id=WP_002211487.1;transl_table=11 NC_008149.1 RefSeq gene 175759 176568 . + . ID=gene155;Name=YPN_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00780;old_locus_tag=YPN_0135 NC_008149.1 Protein Homology CDS 175759 176568 . + 0 ID=cds139;Parent=gene155;Dbxref=Genbank:WP_002211488.1;Name=WP_002211488.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211488.1;transl_table=11 NC_008149.1 RefSeq gene 176845 178044 . + . ID=gene156;Name=YPN_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00785;old_locus_tag=YPN_0136 NC_008149.1 Protein Homology CDS 176845 178044 . + 0 ID=cds140;Parent=gene156;Dbxref=Genbank:WP_002366764.1;Name=WP_002366764.1;gbkey=CDS;product=viral enhancin family protein;protein_id=WP_002366764.1;transl_table=11 NC_008149.1 RefSeq gene 178118 179233 . - . ID=gene157;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=YPN_RS00790;old_locus_tag=YPN_0137 NC_008149.1 Protein Homology CDS 178118 179233 . - 0 ID=cds141;Parent=gene157;Dbxref=Genbank:WP_002211490.1;Name=WP_002211490.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211490.1;transl_table=11 NC_008149.1 RefSeq gene 179586 179684 . + . ID=gene158;Name=YPN_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00795 NC_008149.1 Protein Homology CDS 179586 179684 . + 0 ID=cds142;Parent=gene158;Dbxref=Genbank:WP_002216569.1;Name=WP_002216569.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002216569.1;transl_table=11 NC_008149.1 RefSeq gene 179858 181513 . + . ID=gene159;Name=YPN_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00800;old_locus_tag=YPN_0138 NC_008149.1 Protein Homology CDS 179858 181513 . + 0 ID=cds143;Parent=gene159;Dbxref=Genbank:WP_002211491.1;Name=WP_002211491.1;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002211491.1;transl_table=11 NC_008149.1 RefSeq gene 181503 182777 . + . ID=gene160;Name=YPN_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00805;old_locus_tag=YPN_0139 NC_008149.1 Protein Homology CDS 181503 182777 . + 0 ID=cds144;Parent=gene160;Dbxref=Genbank:WP_002211492.1;Name=WP_002211492.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=WP_002211492.1;transl_table=11 NC_008149.1 RefSeq gene 182774 184069 . + . ID=gene161;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=YPN_RS00810;old_locus_tag=YPN_0140 NC_008149.1 Protein Homology CDS 182774 184069 . + 0 ID=cds145;Parent=gene161;Dbxref=Genbank:WP_002211493.1;Name=WP_002211493.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_002211493.1;transl_table=11 NC_008149.1 RefSeq gene 184231 184758 . - . ID=gene162;Name=YPN_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00815;old_locus_tag=YPN_0141 NC_008149.1 Protein Homology CDS 184231 184758 . - 0 ID=cds146;Parent=gene162;Dbxref=Genbank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211494.1;transl_table=11 NC_008149.1 RefSeq gene 184888 185556 . - . ID=gene163;Name=YPN_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00820;old_locus_tag=YPN_0142 NC_008149.1 Protein Homology CDS 184888 185556 . - 0 ID=cds147;Parent=gene163;Dbxref=Genbank:WP_002211495.1;Name=WP_002211495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211495.1;transl_table=11 NC_008149.1 RefSeq gene 185840 186094 . + . ID=gene164;Name=YPN_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00825;old_locus_tag=YPN_0143 NC_008149.1 Protein Homology CDS 185840 186094 . + 0 ID=cds148;Parent=gene164;Dbxref=Genbank:WP_002215973.1;Name=WP_002215973.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11 NC_008149.1 RefSeq gene 186194 188560 . - . ID=gene165;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=YPN_RS00830;old_locus_tag=YPN_0144 NC_008149.1 Protein Homology CDS 186194 188560 . - 0 ID=cds149;Parent=gene165;Dbxref=Genbank:WP_002211497.1;Name=WP_002211497.1;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;gbkey=CDS;gene=zntA;product=cadmium-transporting ATPase;protein_id=WP_002211497.1;transl_table=11 NC_008149.1 RefSeq gene 188974 189600 . - . ID=gene166;Name=YPN_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00835;old_locus_tag=YPN_0145 NC_008149.1 Protein Homology CDS 188974 189600 . - 0 ID=cds150;Parent=gene166;Dbxref=Genbank:WP_002211498.1;Name=WP_002211498.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211498.1;transl_table=11 NC_008149.1 RefSeq gene 189890 190210 . + . ID=gene167;Name=YPN_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00840;old_locus_tag=YPN_0146 NC_008149.1 Protein Homology CDS 189890 190210 . + 0 ID=cds151;Parent=gene167;Dbxref=Genbank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211499.1;transl_table=11 NC_008149.1 RefSeq gene 190422 190841 . + . ID=gene168;Name=YPN_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00845;old_locus_tag=YPN_0147 NC_008149.1 Protein Homology CDS 190422 190841 . + 0 ID=cds152;Parent=gene168;Dbxref=Genbank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211500.1;transl_table=11 NC_008149.1 RefSeq gene 191028 191300 . - . ID=gene169;Name=YPN_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00850;old_locus_tag=YPN_0148 NC_008149.1 Protein Homology CDS 191028 191300 . - 0 ID=cds153;Parent=gene169;Dbxref=Genbank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211501.1;transl_table=11 NC_008149.1 RefSeq gene 191290 191952 . - . ID=gene170;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=YPN_RS00855;old_locus_tag=YPN_0149 NC_008149.1 Protein Homology CDS 191290 191952 . - 0 ID=cds154;Parent=gene170;Dbxref=Genbank:WP_002211502.1;Name=WP_002211502.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA methyltransferase;protein_id=WP_002211502.1;transl_table=11 NC_008149.1 RefSeq gene 192062 192205 . - . ID=gene171;Name=YPN_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00860 NC_008149.1 Protein Homology CDS 192062 192205 . - 0 ID=cds155;Parent=gene171;Dbxref=Genbank:WP_002215975.1;Name=WP_002215975.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215975.1;transl_table=11 NC_008149.1 RefSeq gene 192234 193841 . + . ID=gene172;Name=YPN_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00865;old_locus_tag=YPN_0150 NC_008149.1 Protein Homology CDS 192234 193841 . + 0 ID=cds156;Parent=gene172;Dbxref=Genbank:WP_002228249.1;Name=WP_002228249.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_002228249.1;transl_table=11 NC_008149.1 RefSeq gene 193847 194515 . + . ID=gene173;Name=YPN_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00870;old_locus_tag=YPN_0151 NC_008149.1 Protein Homology CDS 193847 194515 . + 0 ID=cds157;Parent=gene173;Dbxref=Genbank:WP_002211504.1;Name=WP_002211504.1;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;gbkey=CDS;product=cell division protein FtsE;protein_id=WP_002211504.1;transl_table=11 NC_008149.1 RefSeq gene 194505 195458 . + . ID=gene174;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=YPN_RS00875;old_locus_tag=YPN_0152 NC_008149.1 Protein Homology CDS 194505 195458 . + 0 ID=cds158;Parent=gene174;Dbxref=Genbank:WP_002211505.1;Name=WP_002211505.1;Note=ABC transporter%2C membrane protein;gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=WP_002211505.1;transl_table=11 NC_008149.1 RefSeq gene 195769 196626 . + . ID=gene175;Name=YPN_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00880;old_locus_tag=YPN_0153 NC_008149.1 Protein Homology CDS 195769 196626 . + 0 ID=cds159;Parent=gene175;Dbxref=Genbank:WP_002211506.1;Name=WP_002211506.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_002211506.1;transl_table=11 NC_008149.1 RefSeq gene 196680 196850 . + . ID=gene176;Name=YPN_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00885 NC_008149.1 Protein Homology CDS 196680 196850 . + 0 ID=cds160;Parent=gene176;Dbxref=Genbank:WP_029787950.1;Name=WP_029787950.1;gbkey=CDS;product=transposase;protein_id=WP_029787950.1;transl_table=11 NC_008149.1 RefSeq repeat_region 196689 197410 . + . ID=id27;gbkey=repeat_region NC_008149.1 RefSeq gene 196840 197298 . + . ID=gene177;Name=YPN_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00890;old_locus_tag=YPN_0154 NC_008149.1 Protein Homology CDS 196840 197298 . + 0 ID=cds161;Parent=gene177;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 197544 197936 . - . ID=gene178;Name=YPN_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00895;old_locus_tag=YPN_0155 NC_008149.1 Protein Homology CDS 197544 197936 . - 0 ID=cds162;Parent=gene178;Dbxref=Genbank:WP_002211507.1;Name=WP_002211507.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002211507.1;transl_table=11 NC_008149.1 RefSeq gene 198358 199473 . + . ID=gene179;Name=YPN_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00900;old_locus_tag=YPN_0156 NC_008149.1 Protein Homology CDS 198358 199473 . + 0 ID=cds163;Parent=gene179;Dbxref=Genbank:WP_002211508.1;Name=WP_002211508.1;Note=with LivFGHM is involved in the high affinity leucine transport;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002211508.1;transl_table=11 NC_008149.1 RefSeq gene 199654 200580 . + . ID=gene180;Name=YPN_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00905;old_locus_tag=YPN_0157 NC_008149.1 Protein Homology CDS 199654 200580 . + 0 ID=cds164;Parent=gene180;Dbxref=Genbank:WP_002211509.1;Name=WP_002211509.1;Note=LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=WP_002211509.1;transl_table=11 NC_008149.1 RefSeq gene 200577 201863 . + . ID=gene181;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=YPN_RS00910;old_locus_tag=YPN_0158 NC_008149.1 Protein Homology CDS 200577 201863 . + 0 ID=cds165;Parent=gene181;Dbxref=Genbank:WP_002211510.1;Name=WP_002211510.1;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livM;product=leucine/isoleucine/valine transporter permease subunit;protein_id=WP_002211510.1;transl_table=11 NC_008149.1 RefSeq gene 201860 202627 . + . ID=gene182;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=YPN_RS00915;old_locus_tag=YPN_0159 NC_008149.1 Protein Homology CDS 201860 202627 . + 0 ID=cds166;Parent=gene182;Dbxref=Genbank:WP_002211511.1;Name=WP_002211511.1;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livG;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211511.1;transl_table=11 NC_008149.1 RefSeq gene 202672 203373 . + . ID=gene183;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=YPN_RS00920;old_locus_tag=YPN_0160 NC_008149.1 Protein Homology CDS 202672 203373 . + 0 ID=cds167;Parent=gene183;Dbxref=Genbank:WP_002211512.1;Name=WP_002211512.1;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;gbkey=CDS;gene=livF;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211512.1;transl_table=11 NC_008149.1 RefSeq gene 203601 204062 . + . ID=gene184;Name=YPN_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00925;old_locus_tag=YPN_0161 NC_008149.1 Protein Homology CDS 203601 204062 . + 0 ID=cds168;Parent=gene184;Dbxref=Genbank:WP_002211513.1;Name=WP_002211513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211513.1;transl_table=11 NC_008149.1 RefSeq gene 204177 205283 . - . ID=gene185;Name=YPN_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00930;old_locus_tag=YPN_0162 NC_008149.1 Protein Homology CDS 204177 205283 . - 0 ID=cds169;Parent=gene185;Dbxref=Genbank:WP_002211514.1;Name=WP_002211514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211514.1;transl_table=11 NC_008149.1 RefSeq gene 205375 205893 . - . ID=gene186;Name=YPN_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00935;old_locus_tag=YPN_0163 NC_008149.1 Protein Homology CDS 205375 205893 . - 0 ID=cds170;Parent=gene186;Dbxref=Genbank:WP_002211515.1;Name=WP_002211515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211515.1;transl_table=11 NC_008149.1 RefSeq gene 205955 206602 . - . ID=gene187;Name=YPN_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00940;old_locus_tag=YPN_0164 NC_008149.1 Protein Homology CDS 205955 206602 . - 0 ID=cds171;Parent=gene187;Dbxref=Genbank:WP_002211516.1;Name=WP_002211516.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211516.1;transl_table=11 NC_008149.1 RefSeq gene 206574 207260 . - . ID=gene188;Name=YPN_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00945;old_locus_tag=YPN_0165 NC_008149.1 Protein Homology CDS 206574 207260 . - 0 ID=cds172;Parent=gene188;Dbxref=Genbank:WP_002211517.1;Name=WP_002211517.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211517.1;transl_table=11 NC_008149.1 RefSeq gene 207278 209611 . - . ID=gene189;Name=YPN_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00950;old_locus_tag=YPN_0166 NC_008149.1 Protein Homology CDS 207278 209611 . - 0 ID=cds173;Parent=gene189;Dbxref=Genbank:WP_002211518.1;Name=WP_002211518.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211518.1;transl_table=11 NC_008149.1 RefSeq gene 209878 210369 . - . ID=gene190;Name=YPN_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00955;old_locus_tag=YPN_0167 NC_008149.1 Protein Homology CDS 209878 210369 . - 0 ID=cds174;Parent=gene190;Dbxref=Genbank:WP_002228181.1;Name=WP_002228181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228181.1;transl_table=11 NC_008149.1 RefSeq gene 210924 212243 . + . ID=gene191;Name=YPN_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00960;old_locus_tag=YPN_0168 NC_008149.1 Protein Homology CDS 210924 212243 . + 0 ID=cds175;Parent=gene191;Dbxref=Genbank:WP_002211520.1;Name=WP_002211520.1;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol-3-phosphate-binding periplasmic protein UgpB;protein_id=WP_002211520.1;transl_table=11 NC_008149.1 RefSeq gene 212541 213428 . + . ID=gene192;Name=YPN_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00965;old_locus_tag=YPN_0169 NC_008149.1 Protein Homology CDS 212541 213428 . + 0 ID=cds176;Parent=gene192;Dbxref=Genbank:WP_002211521.1;Name=WP_002211521.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211521.1;transl_table=11 NC_008149.1 RefSeq gene 213425 214270 . + . ID=gene193;Name=YPN_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00970;old_locus_tag=YPN_0170 NC_008149.1 Protein Homology CDS 213425 214270 . + 0 ID=cds177;Parent=gene193;Dbxref=Genbank:WP_002211522.1;Name=WP_002211522.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;product=sn-glycerol 3-phosphate ABC transporter permease;protein_id=WP_002211522.1;transl_table=11 NC_008149.1 RefSeq gene 214277 215350 . + . ID=gene194;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=YPN_RS00975;old_locus_tag=YPN_0171 NC_008149.1 Protein Homology CDS 214277 215350 . + 0 ID=cds178;Parent=gene194;Dbxref=Genbank:WP_002211523.1;Name=WP_002211523.1;Note=part of the UgpABCE glycerol-3-phosphate uptake system;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_002211523.1;transl_table=11 NC_008149.1 RefSeq gene 215347 216096 . + . ID=gene195;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=YPN_RS00980;old_locus_tag=YPN_0172 NC_008149.1 Protein Homology CDS 215347 216096 . + 0 ID=cds179;Parent=gene195;Dbxref=Genbank:WP_002211524.1;Name=WP_002211524.1;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;gbkey=CDS;gene=ugpQ;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211524.1;transl_table=11 NC_008149.1 RefSeq gene 216197 217153 . + . ID=gene196;Name=YPN_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00985;old_locus_tag=YPN_0173 NC_008149.1 Protein Homology CDS 216197 217153 . + 0 ID=cds180;Parent=gene196;Dbxref=Genbank:WP_002224020.1;Name=WP_002224020.1;gbkey=CDS;product=membrane protein;protein_id=WP_002224020.1;transl_table=11 NC_008149.1 RefSeq gene 217506 218405 . + . ID=gene197;Name=YPN_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00990;old_locus_tag=YPN_0174 NC_008149.1 Protein Homology CDS 217506 218405 . + 0 ID=cds181;Parent=gene197;Dbxref=Genbank:WP_002215597.1;Name=WP_002215597.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215597.1;transl_table=11 NC_008149.1 RefSeq gene 218293 219246 . - . ID=gene198;Name=YPN_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS00995;old_locus_tag=YPN_0175 NC_008149.1 Protein Homology CDS 218293 219246 . - 0 ID=cds182;Parent=gene198;Dbxref=Genbank:WP_002211525.1;Name=WP_002211525.1;Note=homocysteine-binding%3B positive regulator of metA%2C metE and metH;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211525.1;transl_table=11 NC_008149.1 RefSeq gene 219337 221628 . + . ID=gene199;Name=YPN_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01000;old_locus_tag=YPN_0176 NC_008149.1 Protein Homology CDS 219337 221628 . + 0 ID=cds183;Parent=gene199;Dbxref=Genbank:WP_002220853.1;Name=WP_002220853.1;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=WP_002220853.1;transl_table=11 NC_008149.1 RefSeq gene 221683 222555 . - . ID=gene200;Name=YPN_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01005;old_locus_tag=YPN_0177 NC_008149.1 Protein Homology CDS 221683 222555 . - 0 ID=cds184;Parent=gene200;Dbxref=Genbank:WP_002211527.1;Name=WP_002211527.1;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=WP_002211527.1;transl_table=11 NC_008149.1 RefSeq gene 222983 223744 . + . ID=gene201;Name=YPN_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01010;old_locus_tag=YPN_0178 NC_008149.1 Protein Homology CDS 222983 223744 . + 0 ID=cds185;Parent=gene201;Dbxref=Genbank:WP_002211528.1;Name=WP_002211528.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11 NC_008149.1 RefSeq gene 223865 224695 . + . ID=gene202;Name=YPN_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01015;old_locus_tag=YPN_0179 NC_008149.1 Protein Homology CDS 223865 224695 . + 0 ID=cds186;Parent=gene202;Dbxref=Genbank:WP_002228183.1;Name=WP_002228183.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002228183.1;transl_table=11 NC_008149.1 RefSeq gene 225059 226870 . + . ID=gene203;Name=YPN_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01020;old_locus_tag=YPN_0180 NC_008149.1 Protein Homology CDS 225059 226870 . + 0 ID=cds187;Parent=gene203;Dbxref=Genbank:WP_002211530.1;Name=WP_002211530.1;gbkey=CDS;product=carbon starvation protein CstA;protein_id=WP_002211530.1;transl_table=11 NC_008149.1 RefSeq gene 227142 227672 . + . ID=gene204;Name=YPN_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01025;old_locus_tag=YPN_0181 NC_008149.1 Protein Homology CDS 227142 227672 . + 0 ID=cds188;Parent=gene204;Dbxref=Genbank:WP_002211531.1;Name=WP_002211531.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002211531.1;transl_table=11 NC_008149.1 RefSeq gene 227880 229385 . + . ID=gene205;Name=YPN_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01030;old_locus_tag=YPN_0182 NC_008149.1 Protein Homology CDS 227880 229385 . + 0 ID=cds189;Parent=gene205;Dbxref=Genbank:WP_002211532.1;Name=WP_002211532.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=WP_002211532.1;transl_table=11 NC_008149.1 RefSeq gene 229477 230232 . + . ID=gene206;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=YPN_RS01035;old_locus_tag=YPN_0183 NC_008149.1 Protein Homology CDS 229477 230232 . + 0 ID=cds190;Parent=gene206;Dbxref=Genbank:WP_002224024.1;Name=WP_002224024.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE;protein_id=WP_002224024.1;transl_table=11 NC_008149.1 RefSeq gene 230246 230896 . + . ID=gene207;Name=YPN_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01040;old_locus_tag=YPN_0184 NC_008149.1 Protein Homology CDS 230246 230896 . + 0 ID=cds191;Parent=gene207;Dbxref=Genbank:WP_002215928.1;Name=WP_002215928.1;gbkey=CDS;product=sterol-binding protein;protein_id=WP_002215928.1;transl_table=11 NC_008149.1 RefSeq gene 230896 232527 . + . ID=gene208;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=YPN_RS01045;old_locus_tag=YPN_0185 NC_008149.1 Protein Homology CDS 230896 232527 . + 0 ID=cds192;Parent=gene208;Dbxref=Genbank:WP_002211535.1;Name=WP_002211535.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=hypothetical protein;protein_id=WP_002211535.1;transl_table=11 NC_008149.1 RefSeq gene 232707 232973 . + . ID=gene209;Name=YPN_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01050;old_locus_tag=YPN_0186 NC_008149.1 Protein Homology CDS 232707 232973 . + 0 ID=cds193;Parent=gene209;Dbxref=Genbank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;product=protein translocase TatA;protein_id=WP_002211536.1;transl_table=11 NC_008149.1 RefSeq gene 232977 233639 . + . ID=gene210;Name=YPN_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01055;old_locus_tag=YPN_0187 NC_008149.1 Protein Homology CDS 232977 233639 . + 0 ID=cds194;Parent=gene210;Dbxref=Genbank:WP_002211537.1;Name=WP_002211537.1;gbkey=CDS;product=Sec-independent protein translocase TatB;protein_id=WP_002211537.1;transl_table=11 NC_008149.1 RefSeq gene 233642 234418 . + . ID=gene211;Name=YPN_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01060;old_locus_tag=YPN_0188 NC_008149.1 Protein Homology CDS 233642 234418 . + 0 ID=cds195;Parent=gene211;Dbxref=Genbank:WP_002211538.1;Name=WP_002211538.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;product=preprotein translocase subunit TatC;protein_id=WP_002211538.1;transl_table=11 NC_008149.1 RefSeq gene 234474 235013 . + . ID=gene212;Name=YPN_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01065;old_locus_tag=YPN_0189 NC_008149.1 Protein Homology CDS 234474 235013 . + 0 ID=cds196;Parent=gene212;Dbxref=Genbank:WP_002211539.1;Name=WP_002211539.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211539.1;transl_table=11 NC_008149.1 RefSeq repeat_region 234952 236909 . + . ID=id28;gbkey=repeat_region NC_008149.1 RefSeq gene 235040 236062 . + . ID=gene213;Name=YPN_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01070;old_locus_tag=YPN_0190 NC_008149.1 Protein Homology CDS 235040 236062 . + 0 ID=cds197;Parent=gene213;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 236062 236841 . + . ID=gene214;Name=YPN_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01075;old_locus_tag=YPN_0191 NC_008149.1 Protein Homology CDS 236062 236841 . + 0 ID=cds198;Parent=gene214;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 236880 237215 . + . ID=gene215;Name=YPN_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01080;old_locus_tag=YPN_0192 NC_008149.1 Protein Homology CDS 236880 237215 . + 0 ID=cds199;Parent=gene215;Dbxref=Genbank:WP_002211540.1;Name=WP_002211540.1;gbkey=CDS;product=deoxyribonuclease;protein_id=WP_002211540.1;transl_table=11 NC_008149.1 RefSeq gene 237230 238252 . + . ID=gene216;Name=YPN_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01085;old_locus_tag=YPN_0193 NC_008149.1 Protein Homology CDS 237230 238252 . + 0 ID=cds200;Parent=gene216;Dbxref=Genbank:WP_002211541.1;Name=WP_002211541.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=WP_002211541.1;transl_table=11 NC_008149.1 RefSeq gene 238362 238850 . - . ID=gene217;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=YPN_RS01090;old_locus_tag=YPN_0194 NC_008149.1 Protein Homology CDS 238362 238850 . - 0 ID=cds201;Parent=gene217;Dbxref=Genbank:WP_002211542.1;Name=WP_002211542.1;gbkey=CDS;gene=rfaH;product=transcriptional regulator;protein_id=WP_002211542.1;transl_table=11 NC_008149.1 RefSeq gene 239098 240594 . + . ID=gene218;Name=YPN_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01095;old_locus_tag=YPN_0195 NC_008149.1 Protein Homology CDS 239098 240594 . + 0 ID=cds202;Parent=gene218;Dbxref=Genbank:WP_002215917.1;Name=WP_002215917.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002215917.1;transl_table=11 NC_008149.1 RefSeq gene 240649 241350 . + . ID=gene219;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=YPN_RS01100;old_locus_tag=YPN_0196 NC_008149.1 Protein Homology CDS 240649 241350 . + 0 ID=cds203;Parent=gene219;Dbxref=Genbank:WP_002215918.1;Name=WP_002215918.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_002215918.1;transl_table=11 NC_008149.1 RefSeq gene 241510 242673 . - . ID=gene220;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=YPN_RS01105;old_locus_tag=YPN_0197 NC_008149.1 Protein Homology CDS 241510 242673 . - 0 ID=cds204;Parent=gene220;Dbxref=Genbank:WP_002211545.1;Name=WP_002211545.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=WP_002211545.1;transl_table=11 NC_008149.1 RefSeq gene 242685 244874 . - . ID=gene221;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=YPN_RS01110;old_locus_tag=YPN_0198 NC_008149.1 Protein Homology CDS 242685 244874 . - 0 ID=cds205;Parent=gene221;Dbxref=Genbank:WP_002211546.1;Name=WP_002211546.1;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadB;product=fatty acid oxidation complex subunit alpha;protein_id=WP_002211546.1;transl_table=11 NC_008149.1 RefSeq gene 245201 246532 . + . ID=gene222;Name=YPN_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01115;old_locus_tag=YPN_0199 NC_008149.1 Protein Homology CDS 245201 246532 . + 0 ID=cds206;Parent=gene222;Dbxref=Genbank:WP_002211547.1;Name=WP_002211547.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=WP_002211547.1;transl_table=11 NC_008149.1 RefSeq gene 246532 246741 . + . ID=gene223;Name=YPN_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01120;old_locus_tag=YPN_0200 NC_008149.1 Protein Homology CDS 246532 246741 . + 0 ID=cds207;Parent=gene223;Dbxref=Genbank:WP_002211548.1;Name=WP_002211548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211548.1;transl_table=11 NC_008149.1 RefSeq repeat_region 246693 247415 . + . ID=id29;gbkey=repeat_region NC_008149.1 RefSeq gene 246846 247304 . + . ID=gene224;Name=YPN_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01125;old_locus_tag=YPN_0201 NC_008149.1 Protein Homology CDS 246846 247304 . + 0 ID=cds208;Parent=gene224;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 247377 247853 . + . ID=gene225;Name=YPN_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01130;old_locus_tag=YPN_0202 NC_008149.1 Protein Homology CDS 247377 247853 . + 0 ID=cds209;Parent=gene225;Dbxref=Genbank:WP_002211549.1;Name=WP_002211549.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211549.1;transl_table=11 NC_008149.1 RefSeq gene 247893 249344 . + . ID=gene226;Name=YPN_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01135;old_locus_tag=YPN_0203 NC_008149.1 Protein Homology CDS 247893 249344 . + 0 ID=cds210;Parent=gene226;Dbxref=Genbank:WP_002211550.1;Name=WP_002211550.1;gbkey=CDS;product=potassium transporter;protein_id=WP_002211550.1;transl_table=11 NC_008149.1 RefSeq gene 249366 249899 . + . ID=gene227;Name=YPN_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01140;old_locus_tag=YPN_0204 NC_008149.1 Protein Homology CDS 249366 249899 . + 0 ID=cds211;Parent=gene227;Dbxref=Genbank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=WP_002215920.1;transl_table=11 NC_008149.1 RefSeq repeat_region 249932 255649 . + . ID=id30;gbkey=repeat_region NC_008149.1 RefSeq gene 250372 251920 . + . ID=gene228;Name=YPN_RS01145;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS01145;old_locus_tag=YPN_r017 NC_008149.1 RefSeq rRNA 250372 251920 . + . ID=rna16;Parent=gene228;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq exon 250372 251920 . + . ID=id31;Parent=rna16;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq gene 252020 252096 . + . ID=gene229;Name=YPN_RS01150;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS01150;old_locus_tag=YPN_r018 NC_008149.1 tRNAscan-SE tRNA 252020 252096 . + . ID=rna17;Parent=gene229;anticodon=(pos:252054..252056);gbkey=tRNA;product=tRNA-Ile NC_008149.1 tRNAscan-SE exon 252020 252096 . + . ID=id32;Parent=rna17;anticodon=(pos:252054..252056);gbkey=tRNA;product=tRNA-Ile NC_008149.1 RefSeq gene 252148 252223 . + . ID=gene230;Name=YPN_RS01155;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS01155;old_locus_tag=YPN_r019 NC_008149.1 tRNAscan-SE tRNA 252148 252223 . + . ID=rna18;Parent=gene230;anticodon=(pos:252181..252183);gbkey=tRNA;product=tRNA-Ala NC_008149.1 tRNAscan-SE exon 252148 252223 . + . ID=id33;Parent=rna18;anticodon=(pos:252181..252183);gbkey=tRNA;product=tRNA-Ala NC_008149.1 RefSeq gene 252433 255366 . + . ID=gene231;Name=YPN_RS01160;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS01160;old_locus_tag=YPN_r020 NC_008149.1 RefSeq rRNA 252433 255366 . + . ID=rna19;Parent=gene231;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq exon 252433 255366 . + . ID=id34;Parent=rna19;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq gene 255458 255573 . + . ID=gene232;Name=YPN_RS01165;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS01165;old_locus_tag=YPN_r021 NC_008149.1 cmsearch rRNA 255458 255573 . + . ID=rna20;Parent=gene232;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 cmsearch exon 255458 255573 . + . ID=id35;Parent=rna20;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 RefSeq gene 256037 257074 . + . ID=gene233;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=YPN_RS01170;old_locus_tag=YPN_0205 NC_008149.1 Protein Homology CDS 256037 257074 . + 0 ID=cds212;Parent=gene233;Dbxref=Genbank:WP_002212288.1;Name=WP_002212288.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_002212288.1;transl_table=11 NC_008149.1 RefSeq gene 257071 258030 . + . ID=gene234;Name=YPN_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01175;old_locus_tag=YPN_0206 NC_008149.1 Protein Homology CDS 257071 258030 . + 0 ID=cds213;Parent=gene234;Dbxref=Genbank:WP_002212289.1;Name=WP_002212289.1;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon;gbkey=CDS;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_002212289.1;transl_table=11 NC_008149.1 RefSeq gene 258065 259015 . - . ID=gene235;Name=YPN_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01180;old_locus_tag=YPN_0207 NC_008149.1 Protein Homology CDS 258065 259015 . - 0 ID=cds214;Parent=gene235;Dbxref=Genbank:WP_002212290.1;Name=WP_002212290.1;gbkey=CDS;product=pantothenate kinase;protein_id=WP_002212290.1;transl_table=11 NC_008149.1 RefSeq gene 259226 259777 . - . ID=gene236;Name=YPN_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01185;old_locus_tag=YPN_0208 NC_008149.1 Protein Homology CDS 259226 259777 . - 0 ID=cds215;Parent=gene236;Dbxref=Genbank:WP_002217850.1;Name=WP_002217850.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002217850.1;transl_table=11 NC_008149.1 RefSeq repeat_region 259779 261738 . + . ID=id36;gbkey=repeat_region NC_008149.1 RefSeq gene 259867 260889 . + . ID=gene237;Name=YPN_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01190;old_locus_tag=YPN_0209 NC_008149.1 Protein Homology CDS 259867 260889 . + 0 ID=cds216;Parent=gene237;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 260889 261668 . + . ID=gene238;Name=YPN_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01195;old_locus_tag=YPN_0210 NC_008149.1 Protein Homology CDS 260889 261668 . + 0 ID=cds217;Parent=gene238;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 262132 262207 . + . ID=gene239;Name=YPN_RS01200;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS01200;old_locus_tag=YPN_r022 NC_008149.1 tRNAscan-SE tRNA 262132 262207 . + . ID=rna21;Parent=gene239;anticodon=(pos:262165..262167);gbkey=tRNA;product=tRNA-Thr NC_008149.1 tRNAscan-SE exon 262132 262207 . + . ID=id37;Parent=rna21;anticodon=(pos:262165..262167);gbkey=tRNA;product=tRNA-Thr NC_008149.1 RefSeq gene 262226 262310 . + . ID=gene240;Name=YPN_RS01205;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS01205;old_locus_tag=YPN_r023 NC_008149.1 tRNAscan-SE tRNA 262226 262310 . + . ID=rna22;Parent=gene240;anticodon=(pos:262260..262262);gbkey=tRNA;product=tRNA-Tyr NC_008149.1 tRNAscan-SE exon 262226 262310 . + . ID=id38;Parent=rna22;anticodon=(pos:262260..262262);gbkey=tRNA;product=tRNA-Tyr NC_008149.1 RefSeq gene 262460 262534 . + . ID=gene241;Name=YPN_RS01210;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS01210;old_locus_tag=YPN_r024 NC_008149.1 tRNAscan-SE tRNA 262460 262534 . + . ID=rna23;Parent=gene241;anticodon=(pos:262493..262495);gbkey=tRNA;product=tRNA-Gly NC_008149.1 tRNAscan-SE exon 262460 262534 . + . ID=id39;Parent=rna23;anticodon=(pos:262493..262495);gbkey=tRNA;product=tRNA-Gly NC_008149.1 RefSeq gene 262541 262616 . + . ID=gene242;Name=YPN_RS01215;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS01215;old_locus_tag=YPN_r025 NC_008149.1 tRNAscan-SE tRNA 262541 262616 . + . ID=rna24;Parent=gene242;anticodon=(pos:262574..262576);gbkey=tRNA;product=tRNA-Thr NC_008149.1 tRNAscan-SE exon 262541 262616 . + . ID=id40;Parent=rna24;anticodon=(pos:262574..262576);gbkey=tRNA;product=tRNA-Thr NC_008149.1 RefSeq gene 262725 263910 . + . ID=gene243;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=YPN_RS01220;old_locus_tag=YPN_0211;pseudo=true NC_008149.1 Protein Homology CDS 262725 263910 . + 0 ID=cds218;Parent=gene243;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=tuf;product=elongation factor Tu;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 264161 264544 . + . ID=gene244;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=YPN_RS01225;old_locus_tag=YPN_0213 NC_008149.1 Protein Homology CDS 264161 264544 . + 0 ID=cds219;Parent=gene244;Dbxref=Genbank:WP_002210670.1;Name=WP_002210670.1;Note=forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=WP_002210670.1;transl_table=11 NC_008149.1 RefSeq gene 264546 265091 . + . ID=gene245;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=YPN_RS01230;old_locus_tag=YPN_0214 NC_008149.1 Protein Homology CDS 264546 265091 . + 0 ID=cds220;Parent=gene245;Dbxref=Genbank:WP_002210671.1;Name=WP_002210671.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription termination/antitermination protein NusG;protein_id=WP_002210671.1;transl_table=11 NC_008149.1 RefSeq gene 265282 265710 . + . ID=gene246;Name=YPN_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01235;old_locus_tag=YPN_0215 NC_008149.1 Protein Homology CDS 265282 265710 . + 0 ID=cds221;Parent=gene246;Dbxref=Genbank:WP_002210672.1;Name=WP_002210672.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11 NC_008149.1 RefSeq gene 265714 266418 . + . ID=gene247;Name=YPN_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01240;old_locus_tag=YPN_0216 NC_008149.1 Protein Homology CDS 265714 266418 . + 0 ID=cds222;Parent=gene247;Dbxref=Genbank:WP_002210673.1;Name=WP_002210673.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_002210673.1;transl_table=11 NC_008149.1 RefSeq gene 266783 267280 . + . ID=gene248;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=YPN_RS01245;old_locus_tag=YPN_0217 NC_008149.1 Protein Homology CDS 266783 267280 . + 0 ID=cds223;Parent=gene248;Dbxref=Genbank:WP_002210674.1;Name=WP_002210674.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=WP_002210674.1;transl_table=11 NC_008149.1 RefSeq gene 267347 267715 . + . ID=gene249;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=YPN_RS01250;old_locus_tag=YPN_0218 NC_008149.1 Protein Homology CDS 267347 267715 . + 0 ID=cds224;Parent=gene249;Dbxref=Genbank:WP_002210675.1;Name=WP_002210675.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11 NC_008149.1 RefSeq gene 268058 272086 . + . ID=gene250;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=YPN_RS01255;old_locus_tag=YPN_0219 NC_008149.1 Protein Homology CDS 268058 272086 . + 0 ID=cds225;Parent=gene250;Dbxref=Genbank:WP_002210676.1;Name=WP_002210676.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_002210676.1;transl_table=11 NC_008149.1 RefSeq gene 272215 276435 . + . ID=gene251;Name=YPN_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01260;old_locus_tag=YPN_0220 NC_008149.1 Protein Homology CDS 272215 276435 . + 0 ID=cds226;Parent=gene251;Dbxref=Genbank:WP_002210677.1;Name=WP_002210677.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002210677.1;transl_table=11 NC_008149.1 RefSeq repeat_region 276451 277172 . + . ID=id41;gbkey=repeat_region NC_008149.1 RefSeq gene 276562 277020 . - . ID=gene252;Name=YPN_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01265;old_locus_tag=YPN_0221 NC_008149.1 Protein Homology CDS 276562 277020 . - 0 ID=cds227;Parent=gene252;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 277010 277177 . - . ID=gene253;Name=YPN_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01270 NC_008149.1 Protein Homology CDS 277010 277177 . - 0 ID=cds228;Parent=gene253;Dbxref=Genbank:WP_002217271.1;Name=WP_002217271.1;gbkey=CDS;product=invasin;protein_id=WP_002217271.1;transl_table=11 NC_008149.1 RefSeq gene 277296 277409 . + . ID=gene254;Name=YPN_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01275 NC_008149.1 Protein Homology CDS 277296 277409 . + 0 ID=cds229;Parent=gene254;Dbxref=Genbank:WP_002224232.1;Name=WP_002224232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224232.1;transl_table=11 NC_008149.1 RefSeq gene 277452 278582 . - . ID=gene255;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=YPN_RS01280;old_locus_tag=YPN_0222 NC_008149.1 Protein Homology CDS 277452 278582 . - 0 ID=cds230;Parent=gene255;Dbxref=Genbank:WP_002210678.1;Name=WP_002210678.1;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=WP_002210678.1;transl_table=11 NC_008149.1 RefSeq gene 278575 279390 . - . ID=gene256;Name=YPN_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01285;old_locus_tag=YPN_0223 NC_008149.1 Protein Homology CDS 278575 279390 . - 0 ID=cds231;Parent=gene256;Dbxref=Genbank:WP_002228257.1;Name=WP_002228257.1;gbkey=CDS;product=thiazole synthase;protein_id=WP_002228257.1;transl_table=11 NC_008149.1 RefSeq gene 279392 279607 . - . ID=gene257;Name=YPN_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01290;old_locus_tag=YPN_0224 NC_008149.1 Protein Homology CDS 279392 279607 . - 0 ID=cds232;Parent=gene257;Dbxref=Genbank:WP_002217275.1;Name=WP_002217275.1;gbkey=CDS;product=thiamine biosynthesis protein ThiS;protein_id=WP_002217275.1;transl_table=11 NC_008149.1 RefSeq gene 279604 280401 . - . ID=gene258;Name=YPN_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01295;old_locus_tag=YPN_0225 NC_008149.1 Protein Homology CDS 279604 280401 . - 0 ID=cds233;Parent=gene258;Dbxref=Genbank:WP_002210680.1;Name=WP_002210680.1;gbkey=CDS;product=molybdopterin biosynthesis protein MoeB;protein_id=WP_002210680.1;transl_table=11 NC_008149.1 RefSeq gene 280391 281065 . - . ID=gene259;Name=YPN_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01300;old_locus_tag=YPN_0226 NC_008149.1 Protein Homology CDS 280391 281065 . - 0 ID=cds234;Parent=gene259;Dbxref=Genbank:WP_002210681.1;Name=WP_002210681.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=WP_002210681.1;transl_table=11 NC_008149.1 RefSeq gene 281052 283097 . - . ID=gene260;Name=YPN_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01305;old_locus_tag=YPN_0227 NC_008149.1 Protein Homology CDS 281052 283097 . - 0 ID=cds235;Parent=gene260;Dbxref=Genbank:WP_002210682.1;Name=WP_002210682.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;product=phosphomethylpyrimidine synthase;protein_id=WP_002210682.1;transl_table=11 NC_008149.1 RefSeq gene 283090 283350 . - . ID=gene261;Name=YPN_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01310 NC_008149.1 Protein Homology CDS 283090 283350 . - 0 ID=cds236;Parent=gene261;Dbxref=Genbank:WP_002228187.1;Name=WP_002228187.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228187.1;transl_table=11 NC_008149.1 RefSeq gene 283473 283982 . - . ID=gene262;Name=YPN_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01315;old_locus_tag=YPN_0228 NC_008149.1 Protein Homology CDS 283473 283982 . - 0 ID=cds237;Parent=gene262;Dbxref=Genbank:WP_002210683.1;Name=WP_002210683.1;gbkey=CDS;product=regulator of sigma D;protein_id=WP_002210683.1;transl_table=11 NC_008149.1 RefSeq gene 284079 284861 . + . ID=gene263;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=YPN_RS01320;old_locus_tag=YPN_0229 NC_008149.1 Protein Homology CDS 284079 284861 . + 0 ID=cds238;Parent=gene263;Dbxref=Genbank:WP_002210684.1;Name=WP_002210684.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=WP_002210684.1;transl_table=11 NC_008149.1 RefSeq gene 284996 285739 . + . ID=gene264;Name=YPN_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01325;old_locus_tag=YPN_0230 NC_008149.1 Protein Homology CDS 284996 285739 . + 0 ID=cds239;Parent=gene264;Dbxref=Genbank:WP_002355297.1;Name=WP_002355297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355297.1;transl_table=11 NC_008149.1 RefSeq gene 285858 286925 . + . ID=gene265;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=YPN_RS01330;old_locus_tag=YPN_0231 NC_008149.1 Protein Homology CDS 285858 286925 . + 0 ID=cds240;Parent=gene265;Dbxref=Genbank:WP_002210686.1;Name=WP_002210686.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=WP_002210686.1;transl_table=11 NC_008149.1 RefSeq gene 286991 287695 . + . ID=gene266;Name=YPN_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01335;old_locus_tag=YPN_0232 NC_008149.1 Protein Homology CDS 286991 287695 . + 0 ID=cds241;Parent=gene266;Dbxref=Genbank:WP_002217884.1;Name=WP_002217884.1;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures;gbkey=CDS;product=endonuclease V;protein_id=WP_002217884.1;transl_table=11 NC_008149.1 RefSeq gene 287741 288331 . + . ID=gene267;Name=YPN_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01340;old_locus_tag=YPN_0233 NC_008149.1 Protein Homology CDS 287741 288331 . + 0 ID=cds242;Parent=gene267;Dbxref=Genbank:WP_002210688.1;Name=WP_002210688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210688.1;transl_table=11 NC_008149.1 RefSeq gene 288520 288795 . + . ID=gene268;Name=YPN_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01345;old_locus_tag=YPN_0234 NC_008149.1 Protein Homology CDS 288520 288795 . + 0 ID=cds243;Parent=gene268;Dbxref=Genbank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210689.1;transl_table=11 NC_008149.1 RefSeq gene 288845 289498 . + . ID=gene269;Name=YPN_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01350;old_locus_tag=YPN_0235 NC_008149.1 Protein Homology CDS 288845 289498 . + 0 ID=cds244;Parent=gene269;Dbxref=Genbank:WP_002355296.1;Name=WP_002355296.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002355296.1;transl_table=11 NC_008149.1 RefSeq gene 289646 290932 . - . ID=gene270;Name=YPN_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01355;old_locus_tag=YPN_0236 NC_008149.1 Protein Homology CDS 289646 290932 . - 0 ID=cds245;Parent=gene270;Dbxref=Genbank:WP_002210691.1;Name=WP_002210691.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_002210691.1;transl_table=11 NC_008149.1 RefSeq gene 290992 292581 . - . ID=gene271;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=YPN_RS01360;old_locus_tag=YPN_0237 NC_008149.1 Protein Homology CDS 290992 292581 . - 0 ID=cds246;Parent=gene271;Dbxref=Genbank:WP_002210692.1;Name=WP_002210692.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional purine biosynthesis protein PurH;protein_id=WP_002210692.1;transl_table=11 NC_008149.1 RefSeq gene 292739 292969 . + . ID=gene272;Name=YPN_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01365 NC_008149.1 Protein Homology CDS 292739 292969 . + 0 ID=cds247;Parent=gene272;Dbxref=Genbank:WP_046155092.1;Name=WP_046155092.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_046155092.1;transl_table=11 NC_008149.1 RefSeq repeat_region 292871 298630 . + . ID=id42;gbkey=repeat_region NC_008149.1 RefSeq gene 293237 294785 . + . ID=gene273;Name=YPN_RS01370;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS01370;old_locus_tag=YPN_r026 NC_008149.1 RefSeq rRNA 293237 294785 . + . ID=rna25;Parent=gene273;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq exon 293237 294785 . + . ID=id43;Parent=rna25;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq gene 294919 294994 . + . ID=gene274;Name=YPN_RS01375;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS01375;old_locus_tag=YPN_r027 NC_008149.1 tRNAscan-SE tRNA 294919 294994 . + . ID=rna26;Parent=gene274;anticodon=(pos:294953..294955);gbkey=tRNA;product=tRNA-Glu NC_008149.1 tRNAscan-SE exon 294919 294994 . + . ID=id44;Parent=rna26;anticodon=(pos:294953..294955);gbkey=tRNA;product=tRNA-Glu NC_008149.1 RefSeq gene 295238 298171 . + . ID=gene275;Name=YPN_RS01380;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS01380;old_locus_tag=YPN_r028 NC_008149.1 RefSeq rRNA 295238 298171 . + . ID=rna27;Parent=gene275;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq exon 295238 298171 . + . ID=id45;Parent=rna27;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq gene 298263 298378 . + . ID=gene276;Name=YPN_RS01385;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS01385;old_locus_tag=YPN_r029 NC_008149.1 cmsearch rRNA 298263 298378 . + . ID=rna28;Parent=gene276;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 cmsearch exon 298263 298378 . + . ID=id46;Parent=rna28;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 RefSeq gene 298529 298759 . + . ID=gene277;Name=YPN_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01390 NC_008149.1 Protein Homology CDS 298529 298759 . + 0 ID=cds248;Parent=gene277;Dbxref=Genbank:WP_025473721.1;Name=WP_025473721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025473721.1;transl_table=11 NC_008149.1 RefSeq repeat_region 298807 300126 . + . ID=id47;gbkey=repeat_region NC_008149.1 RefSeq gene 298881 300089 . + . ID=gene278;Name=YPN_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01395;old_locus_tag=YPN_0238 NC_008149.1 Protein Homology CDS 298881 300089 . + 0 ID=cds249;Parent=gene278;Dbxref=Genbank:WP_002220999.1;Name=WP_002220999.1;gbkey=CDS;product=transposase;protein_id=WP_002220999.1;transl_table=11 NC_008149.1 RefSeq gene 300147 300677 . - . ID=gene279;Name=YPN_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01400;old_locus_tag=YPN_0239 NC_008149.1 Protein Homology CDS 300147 300677 . - 0 ID=cds250;Parent=gene279;Dbxref=Genbank:WP_002217538.1;Name=WP_002217538.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002217538.1;transl_table=11 NC_008149.1 RefSeq gene 300677 301264 . - . ID=gene280;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=YPN_RS01405;old_locus_tag=YPN_0240 NC_008149.1 Protein Homology CDS 300677 301264 . - 0 ID=cds251;Parent=gene280;Dbxref=Genbank:WP_002213171.1;Name=WP_002213171.1;Note=in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;product=molybdenum cofactor guanylyltransferase;protein_id=WP_002213171.1;transl_table=11 NC_008149.1 RefSeq gene 301418 301687 . + . ID=gene281;Name=YPN_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01410;old_locus_tag=YPN_0241 NC_008149.1 Protein Homology CDS 301418 301687 . + 0 ID=cds252;Parent=gene281;Dbxref=Genbank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213170.1;transl_table=11 NC_008149.1 RefSeq gene 301778 302764 . + . ID=gene282;Name=YPN_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01415;old_locus_tag=YPN_0242 NC_008149.1 Protein Homology CDS 301778 302764 . + 0 ID=cds253;Parent=gene282;Dbxref=Genbank:WP_002213169.1;Name=WP_002213169.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;product=serine/threonine protein kinase;protein_id=WP_002213169.1;transl_table=11 NC_008149.1 RefSeq gene 302792 303415 . + . ID=gene283;Name=YPN_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01420;old_locus_tag=YPN_0243 NC_008149.1 Protein Homology CDS 302792 303415 . + 0 ID=cds254;Parent=gene283;Dbxref=Genbank:WP_002213168.1;Name=WP_002213168.1;gbkey=CDS;product=thiol:disulfide interchange protein DsbA;protein_id=WP_002213168.1;transl_table=11 NC_008149.1 RefSeq gene 303907 306705 . + . ID=gene284;Name=YPN_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01425;old_locus_tag=YPN_0244 NC_008149.1 Protein Homology CDS 303907 306705 . + 0 ID=cds255;Parent=gene284;Dbxref=Genbank:WP_002213164.1;Name=WP_002213164.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_002213164.1;transl_table=11 NC_008149.1 RefSeq repeat_region 306964 307686 . + . ID=id48;gbkey=repeat_region NC_008149.1 RefSeq gene 306969 307124 . + . ID=gene285;Name=YPN_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01430 NC_008149.1 Protein Homology CDS 306969 307124 . + 0 ID=cds256;Parent=gene285;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 307114 307572 . + . ID=gene286;Name=YPN_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01435;old_locus_tag=YPN_0245 NC_008149.1 Protein Homology CDS 307114 307572 . + 0 ID=cds257;Parent=gene286;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 307824 308474 . - . ID=gene287;Name=YPN_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01440;old_locus_tag=YPN_0246 NC_008149.1 Protein Homology CDS 307824 308474 . - 0 ID=cds258;Parent=gene287;Dbxref=Genbank:WP_002213160.1;Name=WP_002213160.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002213160.1;transl_table=11 NC_008149.1 RefSeq gene 309219 309785 . + . ID=gene288;Name=YPN_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01445;old_locus_tag=YPN_0247 NC_008149.1 Protein Homology CDS 309219 309785 . + 0 ID=cds259;Parent=gene288;Dbxref=Genbank:WP_002213158.1;Name=WP_002213158.1;gbkey=CDS;product=der GTPase-activating protein YihI;protein_id=WP_002213158.1;transl_table=11 NC_008149.1 RefSeq gene 309968 311341 . + . ID=gene289;Name=YPN_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01450;old_locus_tag=YPN_0248 NC_008149.1 Protein Homology CDS 309968 311341 . + 0 ID=cds260;Parent=gene289;Dbxref=Genbank:WP_002213155.1;Name=WP_002213155.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002213155.1;transl_table=11 NC_008149.1 RefSeq gene 311395 312807 . - . ID=gene290;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=YPN_RS01455;old_locus_tag=YPN_0249 NC_008149.1 Protein Homology CDS 311395 312807 . - 0 ID=cds261;Parent=gene290;Dbxref=Genbank:WP_002213152.1;Name=WP_002213152.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=WP_002213152.1;transl_table=11 NC_008149.1 RefSeq gene 312815 313864 . - . ID=gene291;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=YPN_RS01460;old_locus_tag=YPN_0250 NC_008149.1 Protein Homology CDS 312815 313864 . - 0 ID=cds262;Parent=gene291;Dbxref=Genbank:WP_002213151.1;Name=WP_002213151.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=PAS domain-containing two-component system sensor histidine kinase;protein_id=WP_002213151.1;transl_table=11 NC_008149.1 RefSeq gene 314117 315526 . - . ID=gene292;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=YPN_RS01465;old_locus_tag=YPN_0251 NC_008149.1 Protein Homology CDS 314117 315526 . - 0 ID=cds263;Parent=gene292;Dbxref=Genbank:WP_002213150.1;Name=WP_002213150.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=WP_002213150.1;transl_table=11 NC_008149.1 RefSeq gene 315712 315843 . - . ID=gene293;Name=YPN_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01470 NC_008149.1 Protein Homology CDS 315712 315843 . - 0 ID=cds264;Parent=gene293;Dbxref=Genbank:WP_002422228.1;Name=WP_002422228.1;gbkey=CDS;product=membrane protein;protein_id=WP_002422228.1;transl_table=11 NC_008149.1 RefSeq gene 316088 317911 . + . ID=gene294;Name=YPN_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01475;old_locus_tag=YPN_0252 NC_008149.1 Protein Homology CDS 316088 317911 . + 0 ID=cds265;Parent=gene294;Dbxref=Genbank:WP_002217380.1;Name=WP_002217380.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_002217380.1;transl_table=11 NC_008149.1 RefSeq gene 318233 318823 . + . ID=gene295;Name=YPN_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01480;old_locus_tag=YPN_0253 NC_008149.1 Protein Homology CDS 318233 318823 . + 0 ID=cds266;Parent=gene295;Dbxref=Genbank:WP_002209011.1;Name=WP_002209011.1;gbkey=CDS;product=phosphatase;protein_id=WP_002209011.1;transl_table=11 NC_008149.1 RefSeq gene 318920 319804 . + . ID=gene296;Name=YPN_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01485;old_locus_tag=YPN_0254 NC_008149.1 Protein Homology CDS 318920 319804 . + 0 ID=cds267;Parent=gene296;Dbxref=Genbank:WP_002209010.1;Name=WP_002209010.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209010.1;transl_table=11 NC_008149.1 RefSeq gene 319811 320248 . + . ID=gene297;Name=YPN_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01490;old_locus_tag=YPN_0255 NC_008149.1 Protein Homology CDS 319811 320248 . + 0 ID=cds268;Parent=gene297;Dbxref=Genbank:WP_002209009.1;Name=WP_002209009.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11 NC_008149.1 RefSeq repeat_region 320254 322210 . + . ID=id49;gbkey=repeat_region NC_008149.1 RefSeq gene 320322 321101 . - . ID=gene298;Name=YPN_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01495;old_locus_tag=YPN_0256 NC_008149.1 Protein Homology CDS 320322 321101 . - 0 ID=cds269;Parent=gene298;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 321101 322123 . - . ID=gene299;Name=YPN_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01500;old_locus_tag=YPN_0257 NC_008149.1 Protein Homology CDS 321101 322123 . - 0 ID=cds270;Parent=gene299;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 322257 324320 . + . ID=gene300;Name=YPN_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01505;old_locus_tag=YPN_0258 NC_008149.1 Protein Homology CDS 322257 324320 . + 0 ID=cds271;Parent=gene300;Dbxref=Genbank:WP_002209166.1;Name=WP_002209166.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209166.1;transl_table=11 NC_008149.1 RefSeq gene 324317 325633 . + . ID=gene301;Name=YPN_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01510;old_locus_tag=YPN_0259 NC_008149.1 Protein Homology CDS 324317 325633 . + 0 ID=cds272;Parent=gene301;Dbxref=Genbank:WP_002209167.1;Name=WP_002209167.1;gbkey=CDS;product=mcrBC 5-methylcytosine restriction system component family protein;protein_id=WP_002209167.1;transl_table=11 NC_008149.1 RefSeq gene 325700 325930 . + . ID=gene302;Name=YPN_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01515;old_locus_tag=YPN_0260 NC_008149.1 Protein Homology CDS 325700 325930 . + 0 ID=cds273;Parent=gene302;Dbxref=Genbank:WP_002215297.1;Name=WP_002215297.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215297.1;transl_table=11 NC_008149.1 RefSeq repeat_region 325868 326036 . + . ID=id50;gbkey=repeat_region NC_008149.1 RefSeq gene 326255 326518 . - . ID=gene303;Name=YPN_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01520 NC_008149.1 Protein Homology CDS 326255 326518 . - 0 ID=cds274;Parent=gene303;Dbxref=Genbank:WP_002209168.1;Name=WP_002209168.1;gbkey=CDS;product=transposase;protein_id=WP_002209168.1;transl_table=11 NC_008149.1 RefSeq gene 326657 327982 . + . ID=gene304;Name=YPN_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01525;old_locus_tag=YPN_0262 NC_008149.1 Protein Homology CDS 326657 327982 . + 0 ID=cds275;Parent=gene304;Dbxref=Genbank:WP_002209169.1;Name=WP_002209169.1;gbkey=CDS;product=restriction endonuclease subunit M;protein_id=WP_002209169.1;transl_table=11 NC_008149.1 RefSeq gene 328032 328754 . + . ID=gene305;Name=YPN_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01530;old_locus_tag=YPN_0263 NC_008149.1 Protein Homology CDS 328032 328754 . + 0 ID=cds276;Parent=gene305;Dbxref=Genbank:WP_002209170.1;Name=WP_002209170.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209170.1;transl_table=11 NC_008149.1 RefSeq gene 328726 330099 . + . ID=gene306;Name=YPN_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01535;old_locus_tag=YPN_0264 NC_008149.1 Protein Homology CDS 328726 330099 . + 0 ID=cds277;Parent=gene306;Dbxref=Genbank:WP_002209171.1;Name=WP_002209171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209171.1;transl_table=11 NC_008149.1 RefSeq gene 330443 330730 . - . ID=gene307;Name=YPN_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01540;old_locus_tag=YPN_0265 NC_008149.1 Protein Homology CDS 330443 330730 . - 0 ID=cds278;Parent=gene307;Dbxref=Genbank:WP_002215301.1;Name=WP_002215301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215301.1;transl_table=11 NC_008149.1 RefSeq gene 330932 331129 . - . ID=gene308;Name=YPN_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01545 NC_008149.1 Protein Homology CDS 330932 331129 . - 0 ID=cds279;Parent=gene308;Dbxref=Genbank:WP_002209172.1;Name=WP_002209172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209172.1;transl_table=11 NC_008149.1 RefSeq repeat_region 331068 331230 . + . ID=id51;gbkey=repeat_region NC_008149.1 RefSeq gene 331170 331265 . + . ID=gene309;Name=YPN_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01550 NC_008149.1 Protein Homology CDS 331170 331265 . + 0 ID=cds280;Parent=gene309;Dbxref=Genbank:WP_002215302.1;Name=WP_002215302.1;gbkey=CDS;product=transposase;protein_id=WP_002215302.1;transl_table=11 NC_008149.1 RefSeq repeat_region 331245 331407 . + . ID=id52;gbkey=repeat_region NC_008149.1 RefSeq gene 331371 332759 . + . ID=gene310;Name=YPN_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01555;old_locus_tag=YPN_0266 NC_008149.1 Protein Homology CDS 331371 332759 . + 0 ID=cds281;Parent=gene310;Dbxref=Genbank:WP_002209173.1;Name=WP_002209173.1;gbkey=CDS;product=ATPase involved in DNA repair;protein_id=WP_002209173.1;transl_table=11 NC_008149.1 RefSeq gene 332756 333910 . + . ID=gene311;Name=YPN_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01560;old_locus_tag=YPN_0267 NC_008149.1 Protein Homology CDS 332756 333910 . + 0 ID=cds282;Parent=gene311;Dbxref=Genbank:WP_002209174.1;Name=WP_002209174.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209174.1;transl_table=11 NC_008149.1 RefSeq gene 333922 334047 . - . ID=gene312;Name=YPN_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01565 NC_008149.1 Protein Homology CDS 333922 334047 . - 0 ID=cds283;Parent=gene312;Dbxref=Genbank:WP_002209175.1;Name=WP_002209175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209175.1;transl_table=11 NC_008149.1 RefSeq gene 334056 335102 . - . ID=gene313;Name=YPN_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01570;old_locus_tag=YPN_0268 NC_008149.1 Protein Homology CDS 334056 335102 . - 0 ID=cds284;Parent=gene313;Dbxref=Genbank:WP_002209176.1;Name=WP_002209176.1;gbkey=CDS;product=peptidase M48;protein_id=WP_002209176.1;transl_table=11 NC_008149.1 RefSeq gene 335113 336309 . - . ID=gene314;Name=YPN_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01575;old_locus_tag=YPN_0269 NC_008149.1 Protein Homology CDS 335113 336309 . - 0 ID=cds285;Parent=gene314;Dbxref=Genbank:WP_002209177.1;Name=WP_002209177.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209177.1;transl_table=11 NC_008149.1 RefSeq gene 337015 337551 . + . ID=gene315;Name=YPN_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01580;old_locus_tag=YPN_0270 NC_008149.1 Protein Homology CDS 337015 337551 . + 0 ID=cds286;Parent=gene315;Dbxref=Genbank:WP_002209178.1;Name=WP_002209178.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209178.1;transl_table=11 NC_008149.1 RefSeq gene 337553 338428 . + . ID=gene316;Name=YPN_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01585;old_locus_tag=YPN_0271 NC_008149.1 Protein Homology CDS 337553 338428 . + 0 ID=cds287;Parent=gene316;Dbxref=Genbank:WP_002209179.1;Name=WP_002209179.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209179.1;transl_table=11 NC_008149.1 RefSeq gene 338421 338765 . - . ID=gene317;Name=YPN_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01590;old_locus_tag=YPN_0272 NC_008149.1 Protein Homology CDS 338421 338765 . - 0 ID=cds288;Parent=gene317;Dbxref=Genbank:WP_002209180.1;Name=WP_002209180.1;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209180.1;transl_table=11 NC_008149.1 RefSeq gene 338858 339178 . - . ID=gene318;Name=YPN_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01595;old_locus_tag=YPN_0273 NC_008149.1 Protein Homology CDS 338858 339178 . - 0 ID=cds289;Parent=gene318;Dbxref=Genbank:WP_002209181.1;Name=WP_002209181.1;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;gbkey=CDS;product=PTS fructose transporter subunit IIB;protein_id=WP_002209181.1;transl_table=11 NC_008149.1 RefSeq gene 339519 340601 . - . ID=gene319;Name=YPN_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01600;old_locus_tag=YPN_0274 NC_008149.1 Protein Homology CDS 339519 340601 . - 0 ID=cds290;Parent=gene319;Dbxref=Genbank:WP_002209182.1;Name=WP_002209182.1;gbkey=CDS;product=PTS fructose transporter subunit IIC;protein_id=WP_002209182.1;transl_table=11 NC_008149.1 RefSeq gene 340966 343524 . + . ID=gene320;Name=YPN_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01605;old_locus_tag=YPN_0275 NC_008149.1 Protein Homology CDS 340966 343524 . + 0 ID=cds291;Parent=gene320;Dbxref=Genbank:WP_002228120.1;Name=WP_002228120.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr%3B HPr transfers the phosphoryl group to subunit A%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002228120.1;transl_table=11 NC_008149.1 RefSeq gene 343586 344077 . - . ID=gene321;Name=YPN_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01610;old_locus_tag=YPN_0276 NC_008149.1 Protein Homology CDS 343586 344077 . - 0 ID=cds292;Parent=gene321;Dbxref=Genbank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;product=glycoprotein/receptor precursor;protein_id=WP_002209184.1;transl_table=11 NC_008149.1 RefSeq gene 344378 344668 . - . ID=gene322;Name=YPN_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01615;old_locus_tag=YPN_0277 NC_008149.1 Protein Homology CDS 344378 344668 . - 0 ID=cds293;Parent=gene322;Dbxref=Genbank:WP_002209186.1;Name=WP_002209186.1;gbkey=CDS;product=autoinducer 2-degrading protein LsrG;protein_id=WP_002209186.1;transl_table=11 NC_008149.1 RefSeq gene 344732 345607 . - . ID=gene323;Name=YPN_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01620;old_locus_tag=YPN_0278 NC_008149.1 Protein Homology CDS 344732 345607 . - 0 ID=cds294;Parent=gene323;Dbxref=Genbank:WP_002209188.1;Name=WP_002209188.1;Note=involved in autoinducer 2 transport and processing;gbkey=CDS;product=aldolase;protein_id=WP_002209188.1;transl_table=11 NC_008149.1 RefSeq gene 345663 346682 . - . ID=gene324;Name=YPN_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01625;old_locus_tag=YPN_0279 NC_008149.1 Protein Homology CDS 345663 346682 . - 0 ID=cds295;Parent=gene324;Dbxref=Genbank:WP_002209189.1;Name=WP_002209189.1;Note=with lsrACD is involved in the transport of autoinducer 2 into the cell;gbkey=CDS;product=autoinducer 2-binding protein LsrB;protein_id=WP_002209189.1;transl_table=11 NC_008149.1 RefSeq gene 346741 347742 . - . ID=gene325;Name=YPN_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01630;old_locus_tag=YPN_0280 NC_008149.1 Protein Homology CDS 346741 347742 . - 0 ID=cds296;Parent=gene325;Dbxref=Genbank:WP_002209190.1;Name=WP_002209190.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;product=autoinducer 2 import system permease LsrD;protein_id=WP_002209190.1;transl_table=11 NC_008149.1 RefSeq gene 347739 348794 . - . ID=gene326;Name=YPN_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01635;old_locus_tag=YPN_0281 NC_008149.1 Protein Homology CDS 347739 348794 . - 0 ID=cds297;Parent=gene326;Dbxref=Genbank:WP_002209191.1;Name=WP_002209191.1;Note=with LsrADB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import system permease LsrC;protein_id=WP_002209191.1;transl_table=11 NC_008149.1 RefSeq gene 348788 350371 . - . ID=gene327;Name=YPN_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01640;old_locus_tag=YPN_0282 NC_008149.1 Protein Homology CDS 348788 350371 . - 0 ID=cds298;Parent=gene327;Dbxref=Genbank:WP_002209192.1;Name=WP_002209192.1;Note=with LsrCDB is involved in the transport of autoindiuce 2;gbkey=CDS;product=autoinducer 2 import ATP-binding protein LsrA;protein_id=WP_002209192.1;transl_table=11 NC_008149.1 RefSeq gene 350481 350687 . - . ID=gene328;Name=YPN_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01645;old_locus_tag=YPN_0283 NC_008149.1 Protein Homology CDS 350481 350687 . - 0 ID=cds299;Parent=gene328;Dbxref=Genbank:WP_002221620.1;Name=WP_002221620.1;gbkey=CDS;product=membrane protein;protein_id=WP_002221620.1;transl_table=11 NC_008149.1 RefSeq gene 350716 351703 . + . ID=gene329;Name=YPN_RS01650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS01650;old_locus_tag=YPN_0285;pseudo=true NC_008149.1 Protein Homology CDS 350716 351703 . + 0 ID=cds300;Parent=gene329;Note=regulates the transcription of lsr genes%3B involved in autoinducer 2 uptake%2C biofilm formation and stress responses;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator LsrR;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 351874 353466 . + . ID=gene330;Name=YPN_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01655;old_locus_tag=YPN_0286 NC_008149.1 Protein Homology CDS 351874 353466 . + 0 ID=cds301;Parent=gene330;Dbxref=Genbank:WP_002209194.1;Name=WP_002209194.1;gbkey=CDS;product=autoinducer 2 kinase LsrK;protein_id=WP_002209194.1;transl_table=11 NC_008149.1 RefSeq gene 353812 354975 . + . ID=gene331;Name=YPN_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01660;old_locus_tag=YPN_0287 NC_008149.1 Protein Homology CDS 353812 354975 . + 0 ID=cds302;Parent=gene331;Dbxref=Genbank:WP_002209196.1;Name=WP_002209196.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002209196.1;transl_table=11 NC_008149.1 RefSeq gene 355023 356255 . + . ID=gene332;Name=YPN_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01665;old_locus_tag=YPN_0288 NC_008149.1 Protein Homology CDS 355023 356255 . + 0 ID=cds303;Parent=gene332;Dbxref=Genbank:WP_002209197.1;Name=WP_002209197.1;gbkey=CDS;product=O-antigen biosynthesis protein;protein_id=WP_002209197.1;transl_table=11 NC_008149.1 RefSeq repeat_region 356275 356443 . + . ID=id53;gbkey=repeat_region NC_008149.1 RefSeq gene 356841 357038 . + . ID=gene333;Name=YPN_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21540 NC_008149.1 Protein Homology CDS 356841 357038 . + 0 ID=cds304;Parent=gene333;Dbxref=Genbank:WP_002215224.1;Name=WP_002215224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215224.1;transl_table=11 NC_008149.1 RefSeq gene 357065 357298 . + . ID=gene334;Name=YPN_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01675;old_locus_tag=YPN_0289 NC_008149.1 Protein Homology CDS 357065 357298 . + 0 ID=cds305;Parent=gene334;Dbxref=Genbank:WP_002209198.1;Name=WP_002209198.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209198.1;transl_table=11 NC_008149.1 RefSeq gene 357350 358432 . + . ID=gene335;Name=YPN_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01680;old_locus_tag=YPN_0290 NC_008149.1 Protein Homology CDS 357350 358432 . + 0 ID=cds306;Parent=gene335;Dbxref=Genbank:WP_002209199.1;Name=WP_002209199.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209199.1;transl_table=11 NC_008149.1 RefSeq gene 358432 361518 . + . ID=gene336;Name=YPN_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01685;old_locus_tag=YPN_0291 NC_008149.1 Protein Homology CDS 358432 361518 . + 0 ID=cds307;Parent=gene336;Dbxref=Genbank:WP_002209200.1;Name=WP_002209200.1;gbkey=CDS;product=multidrug transporter AcrB;protein_id=WP_002209200.1;transl_table=11 NC_008149.1 RefSeq gene 361554 361745 . - . ID=gene337;Name=YPN_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01690 NC_008149.1 Protein Homology CDS 361554 361745 . - 0 ID=cds308;Parent=gene337;Dbxref=Genbank:WP_016256142.1;Name=WP_016256142.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256142.1;transl_table=11 NC_008149.1 RefSeq gene 361879 362175 . - . ID=gene338;Name=YPN_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01695;old_locus_tag=YPN_0292 NC_008149.1 Protein Homology CDS 361879 362175 . - 0 ID=cds309;Parent=gene338;Dbxref=Genbank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11 NC_008149.1 RefSeq gene 362358 362681 . - . ID=gene339;Name=YPN_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01700;old_locus_tag=YPN_0293 NC_008149.1 Protein Homology CDS 362358 362681 . - 0 ID=cds310;Parent=gene339;Dbxref=Genbank:WP_002353658.1;Name=WP_002353658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002353658.1;transl_table=11 NC_008149.1 RefSeq gene 363014 364099 . + . ID=gene340;Name=YPN_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01705;old_locus_tag=YPN_0294 NC_008149.1 Protein Homology CDS 363014 364099 . + 0 ID=cds311;Parent=gene340;Dbxref=Genbank:WP_002209202.1;Name=WP_002209202.1;gbkey=CDS;product=pectinesterase;protein_id=WP_002209202.1;transl_table=11 NC_008149.1 RefSeq gene 364640 365812 . - . ID=gene341;Name=YPN_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01710;old_locus_tag=YPN_0295 NC_008149.1 Protein Homology CDS 364640 365812 . - 0 ID=cds312;Parent=gene341;Dbxref=Genbank:WP_002209204.1;Name=WP_002209204.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002209204.1;transl_table=11 NC_008149.1 RefSeq gene 366061 366393 . + . ID=gene342;Name=YPN_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01715;old_locus_tag=YPN_0297 NC_008149.1 Protein Homology CDS 366061 366393 . + 0 ID=cds313;Parent=gene342;Dbxref=Genbank:WP_002215232.1;Name=WP_002215232.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215232.1;transl_table=11 NC_008149.1 RefSeq gene 366563 366649 . - . ID=gene343;Name=YPN_RS01720;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS01720;old_locus_tag=YPN_r032 NC_008149.1 tRNAscan-SE tRNA 366563 366649 . - . ID=rna29;Parent=gene343;anticodon=(pos:complement(366613..366615));gbkey=tRNA;product=tRNA-Leu NC_008149.1 tRNAscan-SE exon 366563 366649 . - . ID=id54;Parent=rna29;anticodon=(pos:complement(366613..366615));gbkey=tRNA;product=tRNA-Leu NC_008149.1 RefSeq gene 366906 367949 . - . ID=gene344;Name=YPN_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01725;old_locus_tag=YPN_0298 NC_008149.1 Protein Homology CDS 366906 367949 . - 0 ID=cds314;Parent=gene344;Dbxref=Genbank:WP_002209206.1;Name=WP_002209206.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase C;protein_id=WP_002209206.1;transl_table=11 NC_008149.1 RefSeq gene 368062 368499 . + . ID=gene345;Name=YPN_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01730;old_locus_tag=YPN_0299 NC_008149.1 Protein Homology CDS 368062 368499 . + 0 ID=cds315;Parent=gene345;Dbxref=Genbank:WP_002209207.1;Name=WP_002209207.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=WP_002209207.1;transl_table=11 NC_008149.1 RefSeq gene 368444 368887 . + . ID=gene346;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=YPN_RS01735;old_locus_tag=YPN_0300 NC_008149.1 Protein Homology CDS 368444 368887 . + 0 ID=cds316;Parent=gene346;Dbxref=Genbank:WP_002216075.1;Name=WP_002216075.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11 NC_008149.1 RefSeq gene 369066 370655 . + . ID=gene347;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=YPN_RS01740;old_locus_tag=YPN_0301 NC_008149.1 Protein Homology CDS 369066 370655 . + 0 ID=cds317;Parent=gene347;Dbxref=Genbank:WP_002209209.1;Name=WP_002209209.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=WP_002209209.1;transl_table=11 NC_008149.1 RefSeq gene 370982 371596 . + . ID=gene348;Name=YPN_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01745;old_locus_tag=YPN_0302 NC_008149.1 Protein Homology CDS 370982 371596 . + 0 ID=cds318;Parent=gene348;Dbxref=Genbank:WP_002209210.1;Name=WP_002209210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209210.1;transl_table=11 NC_008149.1 RefSeq gene 371763 371924 . + . ID=gene349;Name=YPN_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01750;old_locus_tag=YPN_0303 NC_008149.1 Protein Homology CDS 371763 371924 . + 0 ID=cds319;Parent=gene349;Dbxref=Genbank:WP_002209211.1;Name=WP_002209211.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209211.1;transl_table=11 NC_008149.1 RefSeq gene 372001 373269 . + . ID=gene350;Name=YPN_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01755;old_locus_tag=YPN_0304 NC_008149.1 Protein Homology CDS 372001 373269 . + 0 ID=cds320;Parent=gene350;Dbxref=Genbank:WP_002209212.1;Name=WP_002209212.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002209212.1;transl_table=11 NC_008149.1 RefSeq gene 373306 374094 . + . ID=gene351;Name=YPN_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01760;old_locus_tag=YPN_0305 NC_008149.1 Protein Homology CDS 373306 374094 . + 0 ID=cds321;Parent=gene351;Dbxref=Genbank:WP_002228116.1;Name=WP_002228116.1;gbkey=CDS;product=DNAse;protein_id=WP_002228116.1;transl_table=11 NC_008149.1 RefSeq repeat_region 374286 374457 . + . ID=id55;gbkey=repeat_region NC_008149.1 RefSeq gene 374623 375900 . + . ID=gene352;Name=YPN_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01765;old_locus_tag=YPN_0306 NC_008149.1 Protein Homology CDS 374623 375900 . + 0 ID=cds322;Parent=gene352;Dbxref=Genbank:WP_032465614.1;Name=WP_032465614.1;gbkey=CDS;product=nucleoside transporter NupC;protein_id=WP_032465614.1;transl_table=11 NC_008149.1 RefSeq gene 376484 377281 . + . ID=gene353;Name=YPN_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01770;old_locus_tag=YPN_0307 NC_008149.1 Protein Homology CDS 376484 377281 . + 0 ID=cds323;Parent=gene353;Dbxref=Genbank:WP_002216078.1;Name=WP_002216078.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=deoxyribose-phosphate aldolase 2;protein_id=WP_002216078.1;transl_table=11 NC_008149.1 RefSeq gene 377402 377944 . + . ID=gene354;Name=YPN_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01775;old_locus_tag=YPN_0308 NC_008149.1 Protein Homology CDS 377402 377944 . + 0 ID=cds324;Parent=gene354;Dbxref=Genbank:WP_002353659.1;Name=WP_002353659.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_002353659.1;transl_table=11 NC_008149.1 RefSeq gene 377941 378720 . + . ID=gene355;Name=YPN_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01780;old_locus_tag=YPN_0309 NC_008149.1 Protein Homology CDS 377941 378720 . + 0 ID=cds325;Parent=gene355;Dbxref=Genbank:WP_002231521.1;Name=WP_002231521.1;gbkey=CDS;product=thymidine phosphorylase;protein_id=WP_002231521.1;transl_table=11 NC_008149.1 RefSeq gene 378852 380075 . + . ID=gene356;Name=YPN_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01785;old_locus_tag=YPN_0310 NC_008149.1 Protein Homology CDS 378852 380075 . + 0 ID=cds326;Parent=gene356;Dbxref=Genbank:WP_002209216.1;Name=WP_002209216.1;gbkey=CDS;product=phosphopentomutase;protein_id=WP_002209216.1;transl_table=11 NC_008149.1 RefSeq gene 380200 380919 . + . ID=gene357;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=YPN_RS01790;old_locus_tag=YPN_0311 NC_008149.1 Protein Homology CDS 380200 380919 . + 0 ID=cds327;Parent=gene357;Dbxref=Genbank:WP_002209217.1;Name=WP_002209217.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=WP_002209217.1;transl_table=11 NC_008149.1 RefSeq gene 381031 381732 . - . ID=gene358;Name=YPN_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01795;old_locus_tag=YPN_0312 NC_008149.1 Protein Homology CDS 381031 381732 . - 0 ID=cds328;Parent=gene358;Dbxref=Genbank:WP_002209218.1;Name=WP_002209218.1;gbkey=CDS;product=protein Smp;protein_id=WP_002209218.1;transl_table=11 NC_008149.1 RefSeq gene 381964 382944 . + . ID=gene359;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=YPN_RS01800;old_locus_tag=YPN_0313 NC_008149.1 Protein Homology CDS 381964 382944 . + 0 ID=cds329;Parent=gene359;Dbxref=Genbank:WP_002209219.1;Name=WP_002209219.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=WP_002209219.1;transl_table=11 NC_008149.1 RefSeq gene 383032 384414 . + . ID=gene360;Name=YPN_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01805;old_locus_tag=YPN_0314 NC_008149.1 Protein Homology CDS 383032 384414 . + 0 ID=cds330;Parent=gene360;Dbxref=Genbank:WP_002209220.1;Name=WP_002209220.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11 NC_008149.1 RefSeq gene 384573 385844 . + . ID=gene361;Name=YPN_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01810;old_locus_tag=YPN_0315 NC_008149.1 Protein Homology CDS 384573 385844 . + 0 ID=cds331;Parent=gene361;Dbxref=Genbank:WP_002209221.1;Name=WP_002209221.1;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function;gbkey=CDS;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_002209221.1;transl_table=11 NC_008149.1 RefSeq gene 386001 387131 . + . ID=gene362;Name=YPN_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01815;old_locus_tag=YPN_0316 NC_008149.1 Protein Homology CDS 386001 387131 . + 0 ID=cds332;Parent=gene362;Dbxref=Genbank:WP_002218755.1;Name=WP_002218755.1;gbkey=CDS;product=cell division protein Fic;protein_id=WP_002218755.1;transl_table=11 NC_008149.1 RefSeq gene 387277 388919 . - . ID=gene363;Name=YPN_RS01820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS01820;old_locus_tag=YPN_0317;pseudo=true NC_008149.1 Protein Homology CDS 387277 388919 . - 0 ID=cds333;Parent=gene363;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 389123 389629 . - . ID=gene364;Name=YPN_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01825;old_locus_tag=YPN_0319 NC_008149.1 Protein Homology CDS 389123 389629 . - 0 ID=cds334;Parent=gene364;Dbxref=Genbank:WP_002215967.1;Name=WP_002215967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215967.1;transl_table=11 NC_008149.1 RefSeq gene 389635 390912 . - . ID=gene365;Name=YPN_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01830;old_locus_tag=YPN_0320 NC_008149.1 Protein Homology CDS 389635 390912 . - 0 ID=cds335;Parent=gene365;Dbxref=Genbank:WP_002223940.1;Name=WP_002223940.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002223940.1;transl_table=11 NC_008149.1 RefSeq gene 390909 391532 . - . ID=gene366;Name=YPN_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01835;old_locus_tag=YPN_0321 NC_008149.1 Protein Homology CDS 390909 391532 . - 0 ID=cds336;Parent=gene366;Dbxref=Genbank:WP_002209225.1;Name=WP_002209225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209225.1;transl_table=11 NC_008149.1 RefSeq gene 391907 394633 . - . ID=gene367;Name=YPN_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01840;old_locus_tag=YPN_0322 NC_008149.1 Protein Homology CDS 391907 394633 . - 0 ID=cds337;Parent=gene367;Dbxref=Genbank:WP_002209226.1;Name=WP_002209226.1;gbkey=CDS;product=carbonate dehydratase;protein_id=WP_002209226.1;transl_table=11 NC_008149.1 RefSeq gene 395203 397122 . + . ID=gene368;Name=YPN_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01845;old_locus_tag=YPN_0323 NC_008149.1 Protein Homology CDS 395203 397122 . + 0 ID=cds338;Parent=gene368;Dbxref=Genbank:WP_002209227.1;Name=WP_002209227.1;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002209227.1;transl_table=11 NC_008149.1 RefSeq gene 397377 397769 . + . ID=gene369;Name=YPN_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01850;old_locus_tag=YPN_0324 NC_008149.1 Protein Homology CDS 397377 397769 . + 0 ID=cds339;Parent=gene369;Dbxref=Genbank:WP_002209228.1;Name=WP_002209228.1;gbkey=CDS;product=Trp operon repressor;protein_id=WP_002209228.1;transl_table=11 NC_008149.1 RefSeq gene 397766 398308 . - . ID=gene370;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=YPN_RS01855;old_locus_tag=YPN_0325 NC_008149.1 Protein Homology CDS 397766 398308 . - 0 ID=cds340;Parent=gene370;Dbxref=Genbank:WP_002209229.1;Name=WP_002209229.1;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=non-canonical purine NTP phosphatase;protein_id=WP_002209229.1;transl_table=11 NC_008149.1 RefSeq gene 398402 399049 . + . ID=gene371;Name=YPN_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01860;old_locus_tag=YPN_0326 NC_008149.1 Protein Homology CDS 398402 399049 . + 0 ID=cds341;Parent=gene371;Dbxref=Genbank:WP_002209230.1;Name=WP_002209230.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;product=phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11 NC_008149.1 RefSeq gene 399046 399912 . - . ID=gene372;Name=YPN_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01865;old_locus_tag=YPN_0327 NC_008149.1 Protein Homology CDS 399046 399912 . - 0 ID=cds342;Parent=gene372;Dbxref=Genbank:WP_002209231.1;Name=WP_002209231.1;Note=AraC family%3B binds to the right arm of the replication origin oriC;gbkey=CDS;product=RobA family efflux pump transcriptional activator;protein_id=WP_002209231.1;transl_table=11 NC_008149.1 RefSeq gene 400138 400605 . + . ID=gene373;Name=YPN_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01870;old_locus_tag=YPN_0328 NC_008149.1 Protein Homology CDS 400138 400605 . + 0 ID=cds343;Parent=gene373;Dbxref=Genbank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209232.1;transl_table=11 NC_008149.1 RefSeq gene 400779 401495 . - . ID=gene374;Name=YPN_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01875;old_locus_tag=YPN_0329 NC_008149.1 Protein Homology CDS 400779 401495 . - 0 ID=cds344;Parent=gene374;Dbxref=Genbank:WP_002209234.1;Name=WP_002209234.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209234.1;transl_table=11 NC_008149.1 RefSeq gene 402599 405058 . + . ID=gene375;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=YPN_RS01880;old_locus_tag=YPN_0331 NC_008149.1 Protein Homology CDS 402599 405058 . + 0 ID=cds345;Parent=gene375;Dbxref=Genbank:WP_002209237.1;Name=WP_002209237.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=WP_002209237.1;transl_table=11 NC_008149.1 RefSeq gene 405061 405990 . + . ID=gene376;Name=YPN_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01885;old_locus_tag=YPN_0332 NC_008149.1 Protein Homology CDS 405061 405990 . + 0 ID=cds346;Parent=gene376;Dbxref=Genbank:WP_002209238.1;Name=WP_002209238.1;gbkey=CDS;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11 NC_008149.1 RefSeq gene 405994 407283 . + . ID=gene377;Name=YPN_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01890;old_locus_tag=YPN_0333 NC_008149.1 Protein Homology CDS 405994 407283 . + 0 ID=cds347;Parent=gene377;Dbxref=Genbank:WP_002209239.1;Name=WP_002209239.1;gbkey=CDS;product=threonine synthase;protein_id=WP_002209239.1;transl_table=11 NC_008149.1 RefSeq gene 408100 408876 . - . ID=gene378;Name=YPN_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01895;old_locus_tag=YPN_0334 NC_008149.1 Protein Homology CDS 408100 408876 . - 0 ID=cds348;Parent=gene378;Dbxref=Genbank:WP_002209240.1;Name=WP_002209240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209240.1;transl_table=11 NC_008149.1 RefSeq gene 409408 410361 . + . ID=gene379;Name=YPN_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01900;old_locus_tag=YPN_0335 NC_008149.1 Protein Homology CDS 409408 410361 . + 0 ID=cds349;Parent=gene379;Dbxref=Genbank:WP_002209241.1;Name=WP_002209241.1;gbkey=CDS;product=transaldolase;protein_id=WP_002209241.1;transl_table=11 NC_008149.1 RefSeq gene 410649 411236 . + . ID=gene380;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=YPN_RS01905;old_locus_tag=YPN_0337 NC_008149.1 Protein Homology CDS 410649 411236 . + 0 ID=cds350;Parent=gene380;Dbxref=Genbank:WP_002209243.1;Name=WP_002209243.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein MogA;protein_id=WP_002209243.1;transl_table=11 NC_008149.1 RefSeq gene 411364 412752 . + . ID=gene381;Name=YPN_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01910;old_locus_tag=YPN_0338 NC_008149.1 Protein Homology CDS 411364 412752 . + 0 ID=cds351;Parent=gene381;Dbxref=Genbank:WP_002209244.1;Name=WP_002209244.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209244.1;transl_table=11 NC_008149.1 RefSeq gene 412822 415269 . - . ID=gene382;Name=YPN_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01915;old_locus_tag=YPN_0339 NC_008149.1 Protein Homology CDS 412822 415269 . - 0 ID=cds352;Parent=gene382;Dbxref=Genbank:WP_002209245.1;Name=WP_002209245.1;gbkey=CDS;product=GNAT family acetyltransferase;protein_id=WP_002209245.1;transl_table=11 NC_008149.1 RefSeq gene 415557 416168 . - . ID=gene383;Name=YPN_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01920;old_locus_tag=YPN_0340 NC_008149.1 Protein Homology CDS 415557 416168 . - 0 ID=cds353;Parent=gene383;Dbxref=Genbank:WP_002209246.1;Name=WP_002209246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209246.1;transl_table=11 NC_008149.1 RefSeq gene 416542 418452 . + . ID=gene384;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=YPN_RS01925;old_locus_tag=YPN_0341 NC_008149.1 Protein Homology CDS 416542 418452 . + 0 ID=cds354;Parent=gene384;Dbxref=Genbank:WP_002209248.1;Name=WP_002209248.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_002209248.1;transl_table=11 NC_008149.1 RefSeq gene 418564 419703 . + . ID=gene385;Name=YPN_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01930;old_locus_tag=YPN_0342 NC_008149.1 Protein Homology CDS 418564 419703 . + 0 ID=cds355;Parent=gene385;Dbxref=Genbank:WP_002209249.1;Name=WP_002209249.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=WP_002209249.1;transl_table=11 NC_008149.1 RefSeq gene 419946 421130 . + . ID=gene386;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=YPN_RS01935;old_locus_tag=YPN_0343 NC_008149.1 Protein Homology CDS 419946 421130 . + 0 ID=cds356;Parent=gene386;Dbxref=Genbank:WP_002220711.1;Name=WP_002220711.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=Na+/H+ antiporter NhaA;protein_id=WP_002220711.1;transl_table=11 NC_008149.1 RefSeq gene 421260 422159 . + . ID=gene387;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=YPN_RS01940;old_locus_tag=YPN_0344 NC_008149.1 Protein Homology CDS 421260 422159 . + 0 ID=cds357;Parent=gene387;Dbxref=Genbank:WP_002220713.1;Name=WP_002220713.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional regulator;protein_id=WP_002220713.1;transl_table=11 NC_008149.1 RefSeq gene 422290 422553 . - . ID=gene388;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=YPN_RS01945;old_locus_tag=YPN_0345 NC_008149.1 Protein Homology CDS 422290 422553 . - 0 ID=cds358;Parent=gene388;Dbxref=Genbank:WP_002220715.1;Name=WP_002220715.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_002220715.1;transl_table=11 NC_008149.1 RefSeq gene 422575 422751 . - . ID=gene389;Name=YPN_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01950 NC_008149.1 Protein Homology CDS 422575 422751 . - 0 ID=cds359;Parent=gene389;Dbxref=Genbank:WP_002228113.1;Name=WP_002228113.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228113.1;transl_table=11 NC_008149.1 RefSeq gene 422968 423906 . + . ID=gene390;Name=YPN_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01955;old_locus_tag=YPN_0346 NC_008149.1 Protein Homology CDS 422968 423906 . + 0 ID=cds360;Parent=gene390;Dbxref=Genbank:WP_002210510.1;Name=WP_002210510.1;gbkey=CDS;product=riboflavin biosynthesis protein RibF;protein_id=WP_002210510.1;transl_table=11 NC_008149.1 RefSeq gene 423938 426754 . + . ID=gene391;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=YPN_RS01960;old_locus_tag=YPN_0347 NC_008149.1 Protein Homology CDS 423938 426754 . + 0 ID=cds361;Parent=gene391;Dbxref=Genbank:WP_002210509.1;Name=WP_002210509.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_002210509.1;transl_table=11 NC_008149.1 RefSeq gene 426754 427263 . + . ID=gene392;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=YPN_RS01965;old_locus_tag=YPN_0348 NC_008149.1 Protein Homology CDS 426754 427263 . + 0 ID=cds362;Parent=gene392;Dbxref=Genbank:WP_002210508.1;Name=WP_002210508.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_002210508.1;transl_table=11 NC_008149.1 RefSeq gene 427331 427789 . + . ID=gene393;Name=YPN_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01970;old_locus_tag=YPN_0349 NC_008149.1 Protein Homology CDS 427331 427789 . + 0 ID=cds363;Parent=gene393;Dbxref=Genbank:WP_002228112.1;Name=WP_002228112.1;Note=rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228112.1;transl_table=11 NC_008149.1 RefSeq gene 427770 428723 . + . ID=gene394;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=YPN_RS01975;old_locus_tag=YPN_0350 NC_008149.1 Protein Homology CDS 427770 428723 . + 0 ID=cds364;Parent=gene394;Dbxref=Genbank:WP_002210506.1;Name=WP_002210506.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_002210506.1;transl_table=11 NC_008149.1 RefSeq gene 428791 428916 . + . ID=gene395;Name=YPN_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01980;old_locus_tag=YPN_0351 NC_008149.1 Protein Homology CDS 428791 428916 . + 0 ID=cds365;Parent=gene395;Dbxref=Genbank:WP_002210505.1;Name=WP_002210505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210505.1;transl_table=11 NC_008149.1 RefSeq repeat_region 428799 428936 . + . ID=id56;gbkey=repeat_region NC_008149.1 RefSeq gene 428945 429115 . + . ID=gene396;Name=YPN_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01985 NC_008149.1 Protein Homology CDS 428945 429115 . + 0 ID=cds366;Parent=gene396;Dbxref=Genbank:WP_002216778.1;Name=WP_002216778.1;gbkey=CDS;product=invasin;protein_id=WP_002216778.1;transl_table=11 NC_008149.1 RefSeq repeat_region 428952 429674 . + . ID=id57;gbkey=repeat_region NC_008149.1 RefSeq gene 429105 429563 . + . ID=gene397;Name=YPN_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01990;old_locus_tag=YPN_0352 NC_008149.1 Protein Homology CDS 429105 429563 . + 0 ID=cds367;Parent=gene397;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 430016 430837 . + . ID=gene398;Name=YPN_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS01995;old_locus_tag=YPN_0353 NC_008149.1 Protein Homology CDS 430016 430837 . + 0 ID=cds368;Parent=gene398;Dbxref=Genbank:WP_002210504.1;Name=WP_002210504.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_002210504.1;transl_table=11 NC_008149.1 RefSeq gene 431310 432485 . + . ID=gene399;Name=YPN_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02000;old_locus_tag=YPN_0354 NC_008149.1 Protein Homology CDS 431310 432485 . + 0 ID=cds369;Parent=gene399;Dbxref=Genbank:WP_002224759.1;Name=WP_002224759.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl-phosphate synthase small chain;protein_id=WP_002224759.1;transl_table=11 NC_008149.1 RefSeq gene 432501 435734 . + . ID=gene400;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=YPN_RS02005;old_locus_tag=YPN_0355 NC_008149.1 Protein Homology CDS 432501 435734 . + 0 ID=cds370;Parent=gene400;Dbxref=Genbank:WP_002210502.1;Name=WP_002210502.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl-phosphate synthase large chain;protein_id=WP_002210502.1;transl_table=11 NC_008149.1 RefSeq gene 435962 436576 . - . ID=gene401;Name=YPN_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02010;old_locus_tag=YPN_0356 NC_008149.1 Protein Homology CDS 435962 436576 . - 0 ID=cds371;Parent=gene401;Dbxref=Genbank:WP_002210501.1;Name=WP_002210501.1;gbkey=CDS;product=lysine transporter LysE;protein_id=WP_002210501.1;transl_table=11 NC_008149.1 RefSeq gene 436900 437700 . + . ID=gene402;Name=YPN_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02015;old_locus_tag=YPN_0357 NC_008149.1 Protein Homology CDS 436900 437700 . + 0 ID=cds372;Parent=gene402;Dbxref=Genbank:WP_002210499.1;Name=WP_002210499.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210499.1;transl_table=11 NC_008149.1 RefSeq gene 437697 438152 . + . ID=gene403;Name=YPN_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02020;old_locus_tag=YPN_0358 NC_008149.1 Protein Homology CDS 437697 438152 . + 0 ID=cds373;Parent=gene403;Dbxref=Genbank:WP_002210498.1;Name=WP_002210498.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210498.1;transl_table=11 NC_008149.1 RefSeq gene 438302 438784 . + . ID=gene404;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=YPN_RS02025;old_locus_tag=YPN_0359 NC_008149.1 Protein Homology CDS 438302 438784 . + 0 ID=cds374;Parent=gene404;Dbxref=Genbank:WP_002210497.1;Name=WP_002210497.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11 NC_008149.1 RefSeq repeat_region 438846 439566 . + . ID=id58;gbkey=repeat_region NC_008149.1 RefSeq gene 438996 439454 . + . ID=gene405;Name=YPN_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02030;old_locus_tag=YPN_0360 NC_008149.1 Protein Homology CDS 438996 439454 . + 0 ID=cds375;Parent=gene405;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 439989 440210 . + . ID=gene406;Name=YPN_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02035;old_locus_tag=YPN_0362 NC_008149.1 Protein Homology CDS 439989 440210 . + 0 ID=cds376;Parent=gene406;Dbxref=Genbank:WP_002210494.1;Name=WP_002210494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210494.1;transl_table=11 NC_008149.1 RefSeq gene 440337 440801 . + . ID=gene407;Name=YPN_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02040;old_locus_tag=YPN_0363 NC_008149.1 Protein Homology CDS 440337 440801 . + 0 ID=cds377;Parent=gene407;Dbxref=Genbank:WP_002210493.1;Name=WP_002210493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210493.1;transl_table=11 NC_008149.1 RefSeq gene 440891 441760 . - . ID=gene408;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=YPN_RS02045;old_locus_tag=YPN_0364 NC_008149.1 Protein Homology CDS 440891 441760 . - 0 ID=cds378;Parent=gene408;Dbxref=Genbank:WP_002210492.1;Name=WP_002210492.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;product=bis(5'-nucleosyl)-tetraphosphatase symmetrical;protein_id=WP_002210492.1;transl_table=11 NC_008149.1 RefSeq gene 441777 442154 . - . ID=gene409;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=YPN_RS02050;old_locus_tag=YPN_0365 NC_008149.1 Protein Homology CDS 441777 442154 . - 0 ID=cds379;Parent=gene409;Dbxref=Genbank:WP_002210491.1;Name=WP_002210491.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=protein ApaG;protein_id=WP_002210491.1;transl_table=11 NC_008149.1 RefSeq gene 442168 442986 . - . ID=gene410;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=YPN_RS02055;old_locus_tag=YPN_0366 NC_008149.1 Protein Homology CDS 442168 442986 . - 0 ID=cds380;Parent=gene410;Dbxref=Genbank:WP_002210490.1;Name=WP_002210490.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=ribosomal RNA small subunit methyltransferase A;protein_id=WP_002210490.1;transl_table=11 NC_008149.1 RefSeq gene 442979 443974 . - . ID=gene411;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=YPN_RS02060;old_locus_tag=YPN_0367 NC_008149.1 Protein Homology CDS 442979 443974 . - 0 ID=cds381;Parent=gene411;Dbxref=Genbank:WP_002210489.1;Name=WP_002210489.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_002210489.1;transl_table=11 NC_008149.1 RefSeq gene 443958 445262 . - . ID=gene412;Name=YPN_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02065;old_locus_tag=YPN_0368 NC_008149.1 Protein Homology CDS 443958 445262 . - 0 ID=cds382;Parent=gene412;Dbxref=Genbank:WP_002210488.1;Name=WP_002210488.1;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;gbkey=CDS;product=chaperone SurA;protein_id=WP_002210488.1;transl_table=11 NC_008149.1 RefSeq gene 445330 447672 . - . ID=gene413;Name=YPN_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02070;old_locus_tag=YPN_0369 NC_008149.1 Protein Homology CDS 445330 447672 . - 0 ID=cds383;Parent=gene413;Dbxref=Genbank:WP_002228111.1;Name=WP_002228111.1;Note=is involved in outer membrane permeability;gbkey=CDS;product=LPS-assembly protein LptD;protein_id=WP_002228111.1;transl_table=11 NC_008149.1 RefSeq gene 447857 448690 . + . ID=gene414;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=YPN_RS02075;old_locus_tag=YPN_0370 NC_008149.1 Protein Homology CDS 447857 448690 . + 0 ID=cds384;Parent=gene414;Dbxref=Genbank:WP_002210486.1;Name=WP_002210486.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=dnaJ-like protein DjlA;protein_id=WP_002210486.1;transl_table=11 NC_008149.1 RefSeq gene 448988 449608 . - . ID=gene415;Name=YPN_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02080;old_locus_tag=YPN_0371 NC_008149.1 Protein Homology CDS 448988 449608 . - 0 ID=cds385;Parent=gene415;Dbxref=Genbank:WP_002210485.1;Name=WP_002210485.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase A;protein_id=WP_002210485.1;transl_table=11 NC_008149.1 RefSeq gene 450831 451574 . - . ID=gene416;Name=YPN_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02085;old_locus_tag=YPN_0373 NC_008149.1 Protein Homology CDS 450831 451574 . - 0 ID=cds386;Parent=gene416;Dbxref=Genbank:WP_002214747.1;Name=WP_002214747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214747.1;transl_table=11 NC_008149.1 RefSeq gene 451904 452917 . + . ID=gene417;Name=YPN_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02090;old_locus_tag=YPN_0374 NC_008149.1 Protein Homology CDS 451904 452917 . + 0 ID=cds387;Parent=gene417;Dbxref=Genbank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210482.1;transl_table=11 NC_008149.1 RefSeq gene 452928 453488 . + . ID=gene418;Name=YPN_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02095;old_locus_tag=YPN_0375 NC_008149.1 Protein Homology CDS 452928 453488 . + 0 ID=cds388;Parent=gene418;Dbxref=Genbank:WP_002210481.1;Name=WP_002210481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210481.1;transl_table=11 NC_008149.1 RefSeq gene 453497 454999 . + . ID=gene419;Name=YPN_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02100;old_locus_tag=YPN_0376 NC_008149.1 Protein Homology CDS 453497 454999 . + 0 ID=cds389;Parent=gene419;Dbxref=Genbank:WP_002210480.1;Name=WP_002210480.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002210480.1;transl_table=11 NC_008149.1 RefSeq gene 455162 455680 . + . ID=gene420;Name=YPN_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02105;old_locus_tag=YPN_0377 NC_008149.1 Protein Homology CDS 455162 455680 . + 0 ID=cds390;Parent=gene420;Dbxref=Genbank:WP_002210479.1;Name=WP_002210479.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210479.1;transl_table=11 NC_008149.1 RefSeq gene 455754 456197 . + . ID=gene421;Name=YPN_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02110;old_locus_tag=YPN_0378 NC_008149.1 Protein Homology CDS 455754 456197 . + 0 ID=cds391;Parent=gene421;Dbxref=Genbank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;product=lysozyme;protein_id=WP_002210478.1;transl_table=11 NC_008149.1 RefSeq gene 456230 458074 . + . ID=gene422;Name=YPN_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02115;old_locus_tag=YPN_0379 NC_008149.1 Protein Homology CDS 456230 458074 . + 0 ID=cds392;Parent=gene422;Dbxref=Genbank:WP_002210477.1;Name=WP_002210477.1;gbkey=CDS;product=type VI secretion protein TssF;protein_id=WP_002210477.1;transl_table=11 NC_008149.1 RefSeq gene 458067 459050 . + . ID=gene423;Name=YPN_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02120;old_locus_tag=YPN_0380 NC_008149.1 Protein Homology CDS 458067 459050 . + 0 ID=cds393;Parent=gene423;Dbxref=Genbank:WP_002210476.1;Name=WP_002210476.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210476.1;transl_table=11 NC_008149.1 RefSeq gene 459068 461656 . + . ID=gene424;Name=YPN_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02125;old_locus_tag=YPN_0381 NC_008149.1 Protein Homology CDS 459068 461656 . + 0 ID=cds394;Parent=gene424;Dbxref=Genbank:WP_002210475.1;Name=WP_002210475.1;gbkey=CDS;product=peptidase;protein_id=WP_002210475.1;transl_table=11 NC_008149.1 RefSeq gene 461760 464108 . + . ID=gene425;Name=YPN_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02130;old_locus_tag=YPN_0382 NC_008149.1 Protein Homology CDS 461760 464108 . + 0 ID=cds395;Parent=gene425;Dbxref=Genbank:WP_002210474.1;Name=WP_002210474.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210474.1;transl_table=11 NC_008149.1 RefSeq gene 464121 466340 . + . ID=gene426;Name=YPN_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02135;old_locus_tag=YPN_0383 NC_008149.1 Protein Homology CDS 464121 466340 . + 0 ID=cds396;Parent=gene426;Dbxref=Genbank:WP_002224087.1;Name=WP_002224087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224087.1;transl_table=11 NC_008149.1 RefSeq gene 466366 467469 . + . ID=gene427;Name=YPN_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02140;old_locus_tag=YPN_0384 NC_008149.1 Protein Homology CDS 466366 467469 . + 0 ID=cds397;Parent=gene427;Dbxref=Genbank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214739.1;transl_table=11 NC_008149.1 RefSeq gene 467462 468079 . + . ID=gene428;Name=YPN_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02145;old_locus_tag=YPN_0385 NC_008149.1 Protein Homology CDS 467462 468079 . + 0 ID=cds398;Parent=gene428;Dbxref=Genbank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210473.1;transl_table=11 NC_008149.1 RefSeq gene 468085 468450 . + . ID=gene429;Name=YPN_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02150;old_locus_tag=YPN_0386 NC_008149.1 Protein Homology CDS 468085 468450 . + 0 ID=cds399;Parent=gene429;Dbxref=Genbank:WP_002214737.1;Name=WP_002214737.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214737.1;transl_table=11 NC_008149.1 RefSeq gene 468443 468934 . + . ID=gene430;Name=YPN_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02155;old_locus_tag=YPN_0387 NC_008149.1 Protein Homology CDS 468443 468934 . + 0 ID=cds400;Parent=gene430;Dbxref=Genbank:WP_002210471.1;Name=WP_002210471.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210471.1;transl_table=11 NC_008149.1 RefSeq gene 469054 470409 . + . ID=gene431;Name=YPN_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02160;old_locus_tag=YPN_0388 NC_008149.1 Protein Homology CDS 469054 470409 . + 0 ID=cds401;Parent=gene431;Dbxref=Genbank:WP_002210470.1;Name=WP_002210470.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002210470.1;transl_table=11 NC_008149.1 RefSeq gene 470406 472016 . + . ID=gene432;Name=YPN_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02165;old_locus_tag=YPN_0389 NC_008149.1 Protein Homology CDS 470406 472016 . + 0 ID=cds402;Parent=gene432;Dbxref=Genbank:WP_002210469.1;Name=WP_002210469.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210469.1;transl_table=11 NC_008149.1 RefSeq gene 472025 475519 . + . ID=gene433;Name=YPN_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02170;old_locus_tag=YPN_0390 NC_008149.1 Protein Homology CDS 472025 475519 . + 0 ID=cds403;Parent=gene433;Dbxref=Genbank:WP_002228281.1;Name=WP_002228281.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228281.1;transl_table=11 NC_008149.1 RefSeq gene 475541 475894 . + . ID=gene434;Name=YPN_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02175;old_locus_tag=YPN_0391 NC_008149.1 Protein Homology CDS 475541 475894 . + 0 ID=cds404;Parent=gene434;Dbxref=Genbank:WP_002210468.1;Name=WP_002210468.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210468.1;transl_table=11 NC_008149.1 RefSeq repeat_region 475937 476107 . + . ID=id59;gbkey=repeat_region NC_008149.1 RefSeq gene 476150 479056 . - . ID=gene435;Name=YPN_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02180;old_locus_tag=YPN_0392 NC_008149.1 Protein Homology CDS 476150 479056 . - 0 ID=cds405;Parent=gene435;Dbxref=Genbank:WP_002220588.1;Name=WP_002220588.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;product=RNA polymerase-associated protein RapA;protein_id=WP_002220588.1;transl_table=11 NC_008149.1 RefSeq gene 479517 481886 . - . ID=gene436;Name=YPN_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02185;old_locus_tag=YPN_0393 NC_008149.1 Protein Homology CDS 479517 481886 . - 0 ID=cds406;Parent=gene436;Dbxref=Genbank:WP_002210466.1;Name=WP_002210466.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;gbkey=CDS;product=DNA polymerase II;protein_id=WP_002210466.1;transl_table=11 NC_008149.1 RefSeq gene 482082 482849 . + . ID=gene437;Name=YPN_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02190;old_locus_tag=YPN_0394 NC_008149.1 Protein Homology CDS 482082 482849 . + 0 ID=cds407;Parent=gene437;Dbxref=Genbank:WP_002210465.1;Name=WP_002210465.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210465.1;transl_table=11 NC_008149.1 RefSeq gene 482918 483628 . - . ID=gene438;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=YPN_RS02195;old_locus_tag=YPN_0395 NC_008149.1 Protein Homology CDS 482918 483628 . - 0 ID=cds408;Parent=gene438;Dbxref=Genbank:WP_002210464.1;Name=WP_002210464.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine import ATP-binding protein ThiQ;protein_id=WP_002210464.1;transl_table=11 NC_008149.1 RefSeq gene 483615 485222 . - . ID=gene439;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=YPN_RS02200;old_locus_tag=YPN_0396 NC_008149.1 Protein Homology CDS 483615 485222 . - 0 ID=cds409;Parent=gene439;Dbxref=Genbank:WP_002214276.1;Name=WP_002214276.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine transporter membrane protein;protein_id=WP_002214276.1;transl_table=11 NC_008149.1 RefSeq gene 485198 486244 . - . ID=gene440;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=YPN_RS02205;old_locus_tag=YPN_0397 NC_008149.1 Protein Homology CDS 485198 486244 . - 0 ID=cds410;Parent=gene440;Dbxref=Genbank:WP_002210462.1;Name=WP_002210462.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;product=thiamine ABC transporter substrate-binding protein;protein_id=WP_002210462.1;transl_table=11 NC_008149.1 RefSeq gene 486745 487029 . + . ID=gene441;Name=YPN_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02210 NC_008149.1 Protein Homology CDS 486745 487029 . + 0 ID=cds411;Parent=gene441;Dbxref=Genbank:WP_002214269.1;Name=WP_002214269.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214269.1;transl_table=11 NC_008149.1 RefSeq gene 487130 488791 . - . ID=gene442;Name=YPN_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02215;old_locus_tag=YPN_0398 NC_008149.1 Protein Homology CDS 487130 488791 . - 0 ID=cds412;Parent=gene442;Dbxref=Genbank:WP_002210461.1;Name=WP_002210461.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210461.1;transl_table=11 NC_008149.1 RefSeq gene 489029 489202 . + . ID=gene443;Name=YPN_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02220 NC_008149.1 Protein Homology CDS 489029 489202 . + 0 ID=cds413;Parent=gene443;Dbxref=Genbank:WP_002214268.1;Name=WP_002214268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214268.1;transl_table=11 NC_008149.1 RefSeq gene 489455 490636 . + . ID=gene444;Name=YPN_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02225;old_locus_tag=YPN_0399 NC_008149.1 Protein Homology CDS 489455 490636 . + 0 ID=cds414;Parent=gene444;Dbxref=Genbank:WP_002224086.1;Name=WP_002224086.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002224086.1;transl_table=11 NC_008149.1 RefSeq gene 490877 491479 . - . ID=gene445;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=YPN_RS02230;old_locus_tag=YPN_0400 NC_008149.1 Protein Homology CDS 490877 491479 . - 0 ID=cds415;Parent=gene445;Dbxref=Genbank:WP_002210456.1;Name=WP_002210456.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002210456.1;transl_table=11 NC_008149.1 RefSeq gene 491494 492924 . - . ID=gene446;Name=YPN_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02235;old_locus_tag=YPN_0401 NC_008149.1 Protein Homology CDS 491494 492924 . - 0 ID=cds416;Parent=gene446;Dbxref=Genbank:WP_002210455.1;Name=WP_002210455.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002210455.1;transl_table=11 NC_008149.1 RefSeq gene 492926 494017 . - . ID=gene447;Name=YPN_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02240;old_locus_tag=YPN_0402 NC_008149.1 Protein Homology CDS 492926 494017 . - 0 ID=cds417;Parent=gene447;Dbxref=Genbank:WP_002210454.1;Name=WP_002210454.1;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=WP_002210454.1;transl_table=11 NC_008149.1 RefSeq gene 494020 495582 . - . ID=gene448;Name=YPN_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02245;old_locus_tag=YPN_0403 NC_008149.1 Protein Homology CDS 494020 495582 . - 0 ID=cds418;Parent=gene448;Dbxref=Genbank:WP_002210453.1;Name=WP_002210453.1;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11 NC_008149.1 RefSeq repeat_region 495616 496341 . + . ID=id60;gbkey=repeat_region NC_008149.1 RefSeq gene 495729 496187 . - . ID=gene449;Name=YPN_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02250;old_locus_tag=YPN_0404 NC_008149.1 Protein Homology CDS 495729 496187 . - 0 ID=cds419;Parent=gene449;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 496177 496347 . - . ID=gene450;Name=YPN_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02255 NC_008149.1 Protein Homology CDS 496177 496347 . - 0 ID=cds420;Parent=gene450;Dbxref=Genbank:WP_002216432.1;Name=WP_002216432.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216432.1;transl_table=11 NC_008149.1 RefSeq gene 497509 498465 . + . ID=gene451;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=YPN_RS02260;old_locus_tag=YPN_0405 NC_008149.1 Protein Homology CDS 497509 498465 . + 0 ID=cds421;Parent=gene451;Dbxref=Genbank:WP_002216434.1;Name=WP_002216434.1;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;gbkey=CDS;gene=leuO;product=leucine transcriptional activator;protein_id=WP_002216434.1;transl_table=11 NC_008149.1 RefSeq gene 498833 499039 . + . ID=gene452;Name=YPN_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02265 NC_008149.1 Protein Homology CDS 498833 499039 . + 0 ID=cds422;Parent=gene452;Dbxref=Genbank:WP_002216435.1;Name=WP_002216435.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216435.1;transl_table=11 NC_008149.1 RefSeq gene 499036 500841 . + . ID=gene453;Name=YPN_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02270;old_locus_tag=YPN_0406 NC_008149.1 Protein Homology CDS 499036 500841 . + 0 ID=cds423;Parent=gene453;Dbxref=Genbank:WP_002216437.1;Name=WP_002216437.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002216437.1;transl_table=11 NC_008149.1 RefSeq gene 500872 500982 . + . ID=gene454;Name=YPN_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02275 NC_008149.1 Protein Homology CDS 500872 500982 . + 0 ID=cds424;Parent=gene454;Dbxref=Genbank:WP_002228104.1;Name=WP_002228104.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228104.1;transl_table=11 NC_008149.1 RefSeq gene 501301 503028 . + . ID=gene455;Name=YPN_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02280;old_locus_tag=YPN_0407 NC_008149.1 Protein Homology CDS 501301 503028 . + 0 ID=cds425;Parent=gene455;Dbxref=Genbank:WP_002228103.1;Name=WP_002228103.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002228103.1;transl_table=11 NC_008149.1 RefSeq gene 503031 503525 . + . ID=gene456;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=YPN_RS02285;old_locus_tag=YPN_0408 NC_008149.1 Protein Homology CDS 503031 503525 . + 0 ID=cds426;Parent=gene456;Dbxref=Genbank:WP_002210448.1;Name=WP_002210448.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;product=acetolactate synthase;protein_id=WP_002210448.1;transl_table=11 NC_008149.1 RefSeq repeat_region 503573 504295 . + . ID=id61;gbkey=repeat_region NC_008149.1 RefSeq gene 503724 504182 . + . ID=gene457;Name=YPN_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02290;old_locus_tag=YPN_0409 NC_008149.1 Protein Homology CDS 503724 504182 . + 0 ID=cds427;Parent=gene457;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 504504 504620 . - . ID=gene458;Name=YPN_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02295 NC_008149.1 Protein Homology CDS 504504 504620 . - 0 ID=cds428;Parent=gene458;Dbxref=Genbank:WP_002217242.1;Name=WP_002217242.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217242.1;transl_table=11 NC_008149.1 RefSeq gene 504687 505697 . + . ID=gene459;Name=YPN_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02300;old_locus_tag=YPN_0410 NC_008149.1 Protein Homology CDS 504687 505697 . + 0 ID=cds429;Parent=gene459;Dbxref=Genbank:WP_002210447.1;Name=WP_002210447.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210447.1;transl_table=11 NC_008149.1 RefSeq gene 505828 506268 . - . ID=gene460;Name=YPN_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02305;old_locus_tag=YPN_0411 NC_008149.1 Protein Homology CDS 505828 506268 . - 0 ID=cds430;Parent=gene460;Dbxref=Genbank:WP_002210446.1;Name=WP_002210446.1;gbkey=CDS;product=alanine transporter;protein_id=WP_002210446.1;transl_table=11 NC_008149.1 RefSeq repeat_region 506629 506801 . + . ID=id62;gbkey=repeat_region NC_008149.1 RefSeq gene 507370 507828 . + . ID=gene461;Name=YPN_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02310;old_locus_tag=YPN_0412 NC_008149.1 Protein Homology CDS 507370 507828 . + 0 ID=cds431;Parent=gene461;Dbxref=Genbank:WP_002210443.1;Name=WP_002210443.1;gbkey=CDS;product=transcriptional regulator MraZ;protein_id=WP_002210443.1;transl_table=11 NC_008149.1 RefSeq gene 507831 508793 . + . ID=gene462;Name=YPN_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02315;old_locus_tag=YPN_0413 NC_008149.1 Protein Homology CDS 507831 508793 . + 0 ID=cds432;Parent=gene462;Dbxref=Genbank:WP_002210442.1;Name=WP_002210442.1;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase H;protein_id=WP_002210442.1;transl_table=11 NC_008149.1 RefSeq gene 508790 509107 . + . ID=gene463;Name=YPN_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02320;old_locus_tag=YPN_0414 NC_008149.1 Protein Homology CDS 508790 509107 . + 0 ID=cds433;Parent=gene463;Dbxref=Genbank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11 NC_008149.1 RefSeq gene 509173 510936 . + . ID=gene464;Name=YPN_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02325;old_locus_tag=YPN_0415 NC_008149.1 Protein Homology CDS 509173 510936 . + 0 ID=cds434;Parent=gene464;Dbxref=Genbank:WP_002228284.1;Name=WP_002228284.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_002228284.1;transl_table=11 NC_008149.1 RefSeq gene 510923 512410 . + . ID=gene465;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=YPN_RS02330;old_locus_tag=YPN_0416 NC_008149.1 Protein Homology CDS 510923 512410 . + 0 ID=cds435;Parent=gene465;Dbxref=Genbank:WP_002210439.1;Name=WP_002210439.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=WP_002210439.1;transl_table=11 NC_008149.1 RefSeq gene 512407 513783 . + . ID=gene466;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=YPN_RS02335;old_locus_tag=YPN_0417 NC_008149.1 Protein Homology CDS 512407 513783 . + 0 ID=cds436;Parent=gene466;Dbxref=Genbank:WP_002210438.1;Name=WP_002210438.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_002210438.1;transl_table=11 NC_008149.1 RefSeq gene 513777 514859 . + . ID=gene467;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=YPN_RS02340;old_locus_tag=YPN_0418 NC_008149.1 Protein Homology CDS 513777 514859 . + 0 ID=cds437;Parent=gene467;Dbxref=Genbank:WP_002210437.1;Name=WP_002210437.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide transferase;protein_id=WP_002210437.1;transl_table=11 NC_008149.1 RefSeq gene 514862 516178 . + . ID=gene468;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=YPN_RS02345;old_locus_tag=YPN_0419 NC_008149.1 Protein Homology CDS 514862 516178 . + 0 ID=cds438;Parent=gene468;Dbxref=Genbank:WP_002210436.1;Name=WP_002210436.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=WP_002210436.1;transl_table=11 NC_008149.1 RefSeq gene 516178 517380 . + . ID=gene469;Name=YPN_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02350;old_locus_tag=YPN_0420 NC_008149.1 Protein Homology CDS 516178 517380 . + 0 ID=cds439;Parent=gene469;Dbxref=Genbank:WP_002210435.1;Name=WP_002210435.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11 NC_008149.1 RefSeq gene 517377 518447 . + . ID=gene470;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=YPN_RS02355;old_locus_tag=YPN_0421 NC_008149.1 Protein Homology CDS 517377 518447 . + 0 ID=cds440;Parent=gene470;Dbxref=Genbank:WP_002210434.1;Name=WP_002210434.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_002210434.1;transl_table=11 NC_008149.1 RefSeq gene 518585 520060 . + . ID=gene471;Name=YPN_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02360;old_locus_tag=YPN_0422 NC_008149.1 Protein Homology CDS 518585 520060 . + 0 ID=cds441;Parent=gene471;Dbxref=Genbank:WP_002216457.1;Name=WP_002216457.1;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_002216457.1;transl_table=11 NC_008149.1 RefSeq gene 520053 520973 . + . ID=gene472;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=YPN_RS02365;old_locus_tag=YPN_0423 NC_008149.1 Protein Homology CDS 520053 520973 . + 0 ID=cds442;Parent=gene472;Dbxref=Genbank:WP_002210432.1;Name=WP_002210432.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11 NC_008149.1 RefSeq gene 520975 521802 . + . ID=gene473;Name=YPN_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02370;old_locus_tag=YPN_0424 NC_008149.1 Protein Homology CDS 520975 521802 . + 0 ID=cds443;Parent=gene473;Dbxref=Genbank:WP_002228100.1;Name=WP_002228100.1;Note=involved in septum formation;gbkey=CDS;product=cell division protein FtsQ;protein_id=WP_002228100.1;transl_table=11 NC_008149.1 RefSeq gene 521829 523085 . + . ID=gene474;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=YPN_RS02375;old_locus_tag=YPN_0425 NC_008149.1 Protein Homology CDS 521829 523085 . + 0 ID=cds444;Parent=gene474;Dbxref=Genbank:WP_002210431.1;Name=WP_002210431.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11 NC_008149.1 RefSeq gene 523158 524309 . + . ID=gene475;Name=YPN_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02380;old_locus_tag=YPN_0426 NC_008149.1 Protein Homology CDS 523158 524309 . + 0 ID=cds445;Parent=gene475;Dbxref=Genbank:WP_002210430.1;Name=WP_002210430.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_002210430.1;transl_table=11 NC_008149.1 RefSeq gene 524409 525329 . + . ID=gene476;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=YPN_RS02385;old_locus_tag=YPN_0427 NC_008149.1 Protein Homology CDS 524409 525329 . + 0 ID=cds446;Parent=gene476;Dbxref=Genbank:WP_002228285.1;Name=WP_002228285.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11 NC_008149.1 RefSeq gene 525496 526020 . - . ID=gene477;Name=YPN_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02390;old_locus_tag=YPN_0428 NC_008149.1 Protein Homology CDS 525496 526020 . - 0 ID=cds447;Parent=gene477;Dbxref=Genbank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210428.1;transl_table=11 NC_008149.1 RefSeq gene 526049 526582 . + . ID=gene478;Name=YPN_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02395;old_locus_tag=YPN_0429 NC_008149.1 Protein Homology CDS 526049 526582 . + 0 ID=cds448;Parent=gene478;Dbxref=Genbank:WP_002210427.1;Name=WP_002210427.1;gbkey=CDS;product=secretion monitor;protein_id=WP_002210427.1;transl_table=11 NC_008149.1 RefSeq gene 526660 529374 . + . ID=gene479;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=YPN_RS02400;old_locus_tag=YPN_0430 NC_008149.1 Protein Homology CDS 526660 529374 . + 0 ID=cds449;Parent=gene479;Dbxref=Genbank:WP_002210426.1;Name=WP_002210426.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=protein translocase subunit SecA;protein_id=WP_002210426.1;transl_table=11 NC_008149.1 RefSeq repeat_region 529417 529592 . + . ID=id63;gbkey=repeat_region NC_008149.1 RefSeq gene 529669 530055 . + . ID=gene480;Name=YPN_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02405;old_locus_tag=YPN_0431 NC_008149.1 Protein Homology CDS 529669 530055 . + 0 ID=cds450;Parent=gene480;Dbxref=Genbank:WP_002210424.1;Name=WP_002210424.1;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002210424.1;transl_table=11 NC_008149.1 RefSeq repeat_region 530121 532206 . + . ID=id64;gbkey=repeat_region NC_008149.1 RefSeq gene 530317 531096 . - . ID=gene481;Name=YPN_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02410;old_locus_tag=YPN_0433 NC_008149.1 Protein Homology CDS 530317 531096 . - 0 ID=cds451;Parent=gene481;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 531096 532118 . - . ID=gene482;Name=YPN_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02415;old_locus_tag=YPN_0434 NC_008149.1 Protein Homology CDS 531096 532118 . - 0 ID=cds452;Parent=gene482;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 532132 532311 . - . ID=gene483;Name=YPN_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02420;old_locus_tag=YPN_0435 NC_008149.1 Protein Homology CDS 532132 532311 . - 0 ID=cds453;Parent=gene483;Dbxref=Genbank:WP_002210422.1;Name=WP_002210422.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002210422.1;transl_table=11 NC_008149.1 RefSeq gene 532397 532792 . - . ID=gene484;Name=YPN_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02425;old_locus_tag=YPN_0436 NC_008149.1 Protein Homology CDS 532397 532792 . - 0 ID=cds454;Parent=gene484;Dbxref=Genbank:WP_002210421.1;Name=WP_002210421.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210421.1;transl_table=11 NC_008149.1 RefSeq gene 533096 533380 . - . ID=gene485;Name=YPN_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02430;old_locus_tag=YPN_0437 NC_008149.1 Protein Homology CDS 533096 533380 . - 0 ID=cds455;Parent=gene485;Dbxref=Genbank:WP_002210420.1;Name=WP_002210420.1;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002210420.1;transl_table=11 NC_008149.1 RefSeq gene 533377 533772 . - . ID=gene486;Name=YPN_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02435;old_locus_tag=YPN_0438 NC_008149.1 Protein Homology CDS 533377 533772 . - 0 ID=cds456;Parent=gene486;Dbxref=Genbank:WP_002210419.1;Name=WP_002210419.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210419.1;transl_table=11 NC_008149.1 RefSeq gene 533775 534080 . - . ID=gene487;Name=YPN_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02440;old_locus_tag=YPN_0439 NC_008149.1 Protein Homology CDS 533775 534080 . - 0 ID=cds457;Parent=gene487;Dbxref=Genbank:WP_002210418.1;Name=WP_002210418.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210418.1;transl_table=11 NC_008149.1 RefSeq gene 534085 534231 . - . ID=gene488;Name=YPN_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02445;old_locus_tag=YPN_0440 NC_008149.1 Protein Homology CDS 534085 534231 . - 0 ID=cds458;Parent=gene488;Dbxref=Genbank:WP_002210417.1;Name=WP_002210417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210417.1;transl_table=11 NC_008149.1 RefSeq gene 534235 534615 . - . ID=gene489;Name=YPN_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02450;old_locus_tag=YPN_0441 NC_008149.1 Protein Homology CDS 534235 534615 . - 0 ID=cds459;Parent=gene489;Dbxref=Genbank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210416.1;transl_table=11 NC_008149.1 RefSeq gene 534841 535230 . - . ID=gene490;Name=YPN_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02455;old_locus_tag=YPN_0442 NC_008149.1 Protein Homology CDS 534841 535230 . - 0 ID=cds460;Parent=gene490;Dbxref=Genbank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;product=modulator protein MzrA;protein_id=WP_002210415.1;transl_table=11 NC_008149.1 RefSeq gene 535227 535925 . - . ID=gene491;Name=YPN_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02460;old_locus_tag=YPN_0443 NC_008149.1 Protein Homology CDS 535227 535925 . - 0 ID=cds461;Parent=gene491;Dbxref=Genbank:WP_002210414.1;Name=WP_002210414.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210414.1;transl_table=11 NC_008149.1 RefSeq gene 536203 536736 . - . ID=gene492;Name=YPN_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02465;old_locus_tag=YPN_0444 NC_008149.1 Protein Homology CDS 536203 536736 . - 0 ID=cds462;Parent=gene492;Dbxref=Genbank:WP_002218957.1;Name=WP_002218957.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218957.1;transl_table=11 NC_008149.1 RefSeq gene 536985 537779 . - . ID=gene493;Name=YPN_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02470;old_locus_tag=YPN_0445 NC_008149.1 Protein Homology CDS 536985 537779 . - 0 ID=cds463;Parent=gene493;Dbxref=Genbank:WP_002210412.1;Name=WP_002210412.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210412.1;transl_table=11 NC_008149.1 RefSeq gene 538042 539343 . - . ID=gene494;Name=YPN_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02475;old_locus_tag=YPN_0446 NC_008149.1 Protein Homology CDS 538042 539343 . - 0 ID=cds464;Parent=gene494;Dbxref=Genbank:WP_002353699.1;Name=WP_002353699.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=hexuronate transporter ExuT;protein_id=WP_002353699.1;transl_table=11 NC_008149.1 RefSeq gene 539393 539560 . + . ID=gene495;Name=YPN_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02480 NC_008149.1 Protein Homology CDS 539393 539560 . + 0 ID=cds465;Parent=gene495;Dbxref=Genbank:WP_002362425.1;Name=WP_002362425.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002362425.1;transl_table=11 NC_008149.1 RefSeq repeat_region 540086 540702 . + . ID=id65;gbkey=repeat_region NC_008149.1 RefSeq gene 540091 540399 . + . ID=gene496;Name=YPN_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02485;old_locus_tag=YPN_0447 NC_008149.1 Protein Homology CDS 540091 540399 . + 0 ID=cds466;Parent=gene496;Dbxref=Genbank:WP_002228287.1;Name=WP_002228287.1;gbkey=CDS;product=Uronate isomerase;protein_id=WP_002228287.1;transl_table=11 NC_008149.1 RefSeq gene 540399 541808 . + . ID=gene497;Name=YPN_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02490;old_locus_tag=YPN_0448 NC_008149.1 Protein Homology CDS 540399 541808 . + 0 ID=cds467;Parent=gene497;Dbxref=Genbank:WP_002210410.1;Name=WP_002210410.1;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;gbkey=CDS;product=uronate isomerase;protein_id=WP_002210410.1;transl_table=11 NC_008149.1 RefSeq gene 542007 543458 . + . ID=gene498;Name=YPN_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02495;old_locus_tag=YPN_0449 NC_008149.1 Protein Homology CDS 542007 543458 . + 0 ID=cds468;Parent=gene498;Dbxref=Genbank:WP_002210409.1;Name=WP_002210409.1;Note=catalyzes the formation of D-tagaturonate from D-altronate;gbkey=CDS;product=altronate oxidoreductase;protein_id=WP_002210409.1;transl_table=11 NC_008149.1 RefSeq gene 543469 544959 . + . ID=gene499;Name=YPN_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02500;old_locus_tag=YPN_0450 NC_008149.1 Protein Homology CDS 543469 544959 . + 0 ID=cds469;Parent=gene499;Dbxref=Genbank:WP_002210408.1;Name=WP_002210408.1;gbkey=CDS;product=altronate hydrolase;protein_id=WP_002210408.1;transl_table=11 NC_008149.1 RefSeq gene 545112 545642 . + . ID=gene500;Name=YPN_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02505;old_locus_tag=YPN_0451 NC_008149.1 Protein Homology CDS 545112 545642 . + 0 ID=cds470;Parent=gene500;Dbxref=Genbank:WP_002210407.1;Name=WP_002210407.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210407.1;transl_table=11 NC_008149.1 RefSeq repeat_region 545647 546372 . + . ID=id66;gbkey=repeat_region NC_008149.1 RefSeq gene 545760 546218 . - . ID=gene501;Name=YPN_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02510;old_locus_tag=YPN_0452 NC_008149.1 Protein Homology CDS 545760 546218 . - 0 ID=cds471;Parent=gene501;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 546419 547675 . - . ID=gene502;Name=YPN_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02515;old_locus_tag=YPN_0453 NC_008149.1 Protein Homology CDS 546419 547675 . - 0 ID=cds472;Parent=gene502;Dbxref=Genbank:WP_002216063.1;Name=WP_002216063.1;gbkey=CDS;product=serine/threonine transporter SstT;protein_id=WP_002216063.1;transl_table=11 NC_008149.1 RefSeq gene 548210 549205 . - . ID=gene503;Name=YPN_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02520;old_locus_tag=YPN_0454 NC_008149.1 Protein Homology CDS 548210 549205 . - 0 ID=cds473;Parent=gene503;Dbxref=Genbank:WP_002210405.1;Name=WP_002210405.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210405.1;transl_table=11 NC_008149.1 RefSeq gene 549408 549917 . - . ID=gene504;Name=YPN_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02525;old_locus_tag=YPN_0455 NC_008149.1 Protein Homology CDS 549408 549917 . - 0 ID=cds474;Parent=gene504;Dbxref=Genbank:WP_002210404.1;Name=WP_002210404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210404.1;transl_table=11 NC_008149.1 RefSeq gene 550156 552969 . - . ID=gene505;Name=YPN_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02530;old_locus_tag=YPN_0456 NC_008149.1 Protein Homology CDS 550156 552969 . - 0 ID=cds475;Parent=gene505;Dbxref=Genbank:WP_002353701.1;Name=WP_002353701.1;gbkey=CDS;product=autotransporter;protein_id=WP_002353701.1;transl_table=11 NC_008149.1 RefSeq repeat_region 551288 551628 . + . ID=id67;gbkey=repeat_region NC_008149.1 RefSeq gene 553609 554796 . + . ID=gene506;Name=YPN_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02535;old_locus_tag=YPN_0457 NC_008149.1 Protein Homology CDS 553609 554796 . + 0 ID=cds476;Parent=gene506;Dbxref=Genbank:WP_002210402.1;Name=WP_002210402.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase G;protein_id=WP_002210402.1;transl_table=11 NC_008149.1 RefSeq gene 554912 556933 . - . ID=gene507;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=YPN_RS02540;old_locus_tag=YPN_0458 NC_008149.1 Protein Homology CDS 554912 556933 . - 0 ID=cds477;Parent=gene507;Dbxref=Genbank:WP_002210401.1;Name=WP_002210401.1;Note=catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=WP_002210401.1;transl_table=11 NC_008149.1 RefSeq gene 557146 557715 . - . ID=gene508;Name=YPN_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02545;old_locus_tag=YPN_0459 NC_008149.1 Protein Homology CDS 557146 557715 . - 0 ID=cds478;Parent=gene508;Dbxref=Genbank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210400.1;transl_table=11 NC_008149.1 RefSeq gene 557811 558044 . + . ID=gene509;Name=YPN_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02550 NC_008149.1 Protein Homology CDS 557811 558044 . + 0 ID=cds479;Parent=gene509;Dbxref=Genbank:WP_002214938.1;Name=WP_002214938.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214938.1;transl_table=11 NC_008149.1 RefSeq gene 558106 559605 . - . ID=gene510;Name=YPN_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02555;old_locus_tag=YPN_0460 NC_008149.1 Protein Homology CDS 558106 559605 . - 0 ID=cds480;Parent=gene510;Dbxref=Genbank:WP_002210399.1;Name=WP_002210399.1;gbkey=CDS;product=kinase;protein_id=WP_002210399.1;transl_table=11 NC_008149.1 RefSeq gene 559637 561370 . - . ID=gene511;Name=YPN_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02560;old_locus_tag=YPN_0461 NC_008149.1 Protein Homology CDS 559637 561370 . - 0 ID=cds481;Parent=gene511;Dbxref=Genbank:WP_002210398.1;Name=WP_002210398.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210398.1;transl_table=11 NC_008149.1 RefSeq gene 561426 562409 . - . ID=gene512;Name=YPN_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02565;old_locus_tag=YPN_0462 NC_008149.1 Protein Homology CDS 561426 562409 . - 0 ID=cds482;Parent=gene512;Dbxref=Genbank:WP_002228095.1;Name=WP_002228095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228095.1;transl_table=11 NC_008149.1 RefSeq gene 562511 563149 . - . ID=gene513;Name=YPN_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02570;old_locus_tag=YPN_0463 NC_008149.1 Protein Homology CDS 562511 563149 . - 0 ID=cds483;Parent=gene513;Dbxref=Genbank:WP_002228094.1;Name=WP_002228094.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002228094.1;transl_table=11 NC_008149.1 RefSeq gene 563151 563792 . - . ID=gene514;Name=YPN_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02575;old_locus_tag=YPN_0464 NC_008149.1 Protein Homology CDS 563151 563792 . - 0 ID=cds484;Parent=gene514;Dbxref=Genbank:WP_002210396.1;Name=WP_002210396.1;gbkey=CDS;product=tellurium resistance protein TerX;protein_id=WP_002210396.1;transl_table=11 NC_008149.1 RefSeq gene 563825 564463 . - . ID=gene515;Name=YPN_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02580;old_locus_tag=YPN_0465 NC_008149.1 Protein Homology CDS 563825 564463 . - 0 ID=cds485;Parent=gene515;Dbxref=Genbank:WP_002210395.1;Name=WP_002210395.1;gbkey=CDS;product=tellerium resistance protein TerY;protein_id=WP_002210395.1;transl_table=11 NC_008149.1 RefSeq gene 565178 566866 . + . ID=gene516;Name=YPN_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02585;old_locus_tag=YPN_0466 NC_008149.1 Protein Homology CDS 565178 566866 . + 0 ID=cds486;Parent=gene516;Dbxref=Genbank:WP_002210394.1;Name=WP_002210394.1;gbkey=CDS;product=outer membrane transporter CdiB;protein_id=WP_002210394.1;transl_table=11 NC_008149.1 RefSeq gene 566911 572763 . + . ID=gene517;Name=YPN_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02590;old_locus_tag=YPN_0467 NC_008149.1 Protein Homology CDS 566911 572763 . + 0 ID=cds487;Parent=gene517;Dbxref=Genbank:WP_002228289.1;Name=WP_002228289.1;gbkey=CDS;product=adhesin;protein_id=WP_002228289.1;transl_table=11 NC_008149.1 RefSeq gene 572827 572991 . + . ID=gene518;Name=YPN_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02595;old_locus_tag=YPN_0468 NC_008149.1 Protein Homology CDS 572827 572991 . + 0 ID=cds488;Parent=gene518;Dbxref=Genbank:WP_002228290.1;Name=WP_002228290.1;gbkey=CDS;product=adhesin;protein_id=WP_002228290.1;transl_table=11 NC_008149.1 RefSeq gene 573259 575544 . - . ID=gene519;Name=YPN_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02600;old_locus_tag=YPN_0469 NC_008149.1 Protein Homology CDS 573259 575544 . - 0 ID=cds489;Parent=gene519;Dbxref=Genbank:WP_002210389.1;Name=WP_002210389.1;gbkey=CDS;product=autotransporter;protein_id=WP_002210389.1;transl_table=11 NC_008149.1 RefSeq gene 575604 576599 . - . ID=gene520;Name=YPN_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02605;old_locus_tag=YPN_0470 NC_008149.1 Protein Homology CDS 575604 576599 . - 0 ID=cds490;Parent=gene520;Dbxref=Genbank:WP_002210388.1;Name=WP_002210388.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210388.1;transl_table=11 NC_008149.1 RefSeq gene 576701 578080 . - . ID=gene521;Name=YPN_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02610;old_locus_tag=YPN_0471 NC_008149.1 Protein Homology CDS 576701 578080 . - 0 ID=cds491;Parent=gene521;Dbxref=Genbank:WP_002210387.1;Name=WP_002210387.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210387.1;transl_table=11 NC_008149.1 RefSeq gene 578406 579521 . + . ID=gene522;Name=YPN_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02615;old_locus_tag=YPN_0472 NC_008149.1 Protein Homology CDS 578406 579521 . + 0 ID=cds492;Parent=gene522;Dbxref=Genbank:WP_002353714.1;Name=WP_002353714.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002353714.1;transl_table=11 NC_008149.1 RefSeq gene 579604 582957 . + . ID=gene523;Name=YPN_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02620;old_locus_tag=YPN_0473 NC_008149.1 Protein Homology CDS 579604 582957 . + 0 ID=cds493;Parent=gene523;Dbxref=Genbank:WP_002228291.1;Name=WP_002228291.1;gbkey=CDS;product=sugar phosphorylase;protein_id=WP_002228291.1;transl_table=11 NC_008149.1 RefSeq gene 583066 584052 . + . ID=gene524;Name=YPN_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02625;old_locus_tag=YPN_0474 NC_008149.1 Protein Homology CDS 583066 584052 . + 0 ID=cds494;Parent=gene524;Dbxref=Genbank:WP_002228292.1;Name=WP_002228292.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002228292.1;transl_table=11 NC_008149.1 RefSeq gene 584129 585373 . + . ID=gene525;Name=YPN_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02630;old_locus_tag=YPN_0475 NC_008149.1 Protein Homology CDS 584129 585373 . + 0 ID=cds495;Parent=gene525;Dbxref=Genbank:WP_002214214.1;Name=WP_002214214.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002214214.1;transl_table=11 NC_008149.1 RefSeq gene 585427 586308 . + . ID=gene526;Name=YPN_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02635;old_locus_tag=YPN_0476 NC_008149.1 Protein Homology CDS 585427 586308 . + 0 ID=cds496;Parent=gene526;Dbxref=Genbank:WP_002210382.1;Name=WP_002210382.1;gbkey=CDS;product=permease;protein_id=WP_002210382.1;transl_table=11 NC_008149.1 RefSeq gene 586308 587126 . + . ID=gene527;Name=YPN_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02640;old_locus_tag=YPN_0477 NC_008149.1 Protein Homology CDS 586308 587126 . + 0 ID=cds497;Parent=gene527;Dbxref=Genbank:WP_002210381.1;Name=WP_002210381.1;gbkey=CDS;product=permease;protein_id=WP_002210381.1;transl_table=11 NC_008149.1 RefSeq gene 587123 587638 . + . ID=gene528;Name=YPN_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02645;old_locus_tag=YPN_0478 NC_008149.1 Protein Homology CDS 587123 587638 . + 0 ID=cds498;Parent=gene528;Dbxref=Genbank:WP_002210380.1;Name=WP_002210380.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210380.1;transl_table=11 NC_008149.1 RefSeq gene 587689 589872 . + . ID=gene529;Name=YPN_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02650;old_locus_tag=YPN_0479 NC_008149.1 Protein Homology CDS 587689 589872 . + 0 ID=cds499;Parent=gene529;Dbxref=Genbank:WP_002210379.1;Name=WP_002210379.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210379.1;transl_table=11 NC_008149.1 RefSeq gene 589936 591462 . - . ID=gene530;Name=YPN_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02655;old_locus_tag=YPN_0480 NC_008149.1 Protein Homology CDS 589936 591462 . - 0 ID=cds500;Parent=gene530;Dbxref=Genbank:WP_002214220.1;Name=WP_002214220.1;gbkey=CDS;product=transporter;protein_id=WP_002214220.1;transl_table=11 NC_008149.1 RefSeq gene 591467 593368 . - . ID=gene531;Name=YPN_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02660;old_locus_tag=YPN_0481 NC_008149.1 Protein Homology CDS 591467 593368 . - 0 ID=cds501;Parent=gene531;Dbxref=Genbank:WP_002210377.1;Name=WP_002210377.1;gbkey=CDS;product=fusaric acid resistance protein;protein_id=WP_002210377.1;transl_table=11 NC_008149.1 RefSeq gene 593352 594401 . - . ID=gene532;Name=YPN_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02665;old_locus_tag=YPN_0482 NC_008149.1 Protein Homology CDS 593352 594401 . - 0 ID=cds502;Parent=gene532;Dbxref=Genbank:WP_002210376.1;Name=WP_002210376.1;gbkey=CDS;product=multidrug resistance protein MdtN;protein_id=WP_002210376.1;transl_table=11 NC_008149.1 RefSeq gene 594411 594746 . - . ID=gene533;Name=YPN_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02670;old_locus_tag=YPN_0483 NC_008149.1 Protein Homology CDS 594411 594746 . - 0 ID=cds503;Parent=gene533;Dbxref=Genbank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214224.1;transl_table=11 NC_008149.1 RefSeq gene 594743 594943 . - . ID=gene534;Name=YPN_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02675;old_locus_tag=YPN_0484 NC_008149.1 Protein Homology CDS 594743 594943 . - 0 ID=cds504;Parent=gene534;Dbxref=Genbank:WP_002210374.1;Name=WP_002210374.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210374.1;transl_table=11 NC_008149.1 RefSeq gene 595116 595223 . - . ID=gene535;Name=YPN_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02680 NC_008149.1 Protein Homology CDS 595116 595223 . - 0 ID=cds505;Parent=gene535;Dbxref=Genbank:WP_002214227.1;Name=WP_002214227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214227.1;transl_table=11 NC_008149.1 RefSeq gene 595705 596937 . + . ID=gene536;Name=YPN_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02685;old_locus_tag=YPN_0485 NC_008149.1 Protein Homology CDS 595705 596937 . + 0 ID=cds506;Parent=gene536;Dbxref=Genbank:WP_002210373.1;Name=WP_002210373.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002210373.1;transl_table=11 NC_008149.1 RefSeq gene 596930 598381 . + . ID=gene537;Name=YPN_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02690;old_locus_tag=YPN_0486 NC_008149.1 Protein Homology CDS 596930 598381 . + 0 ID=cds507;Parent=gene537;Dbxref=Genbank:WP_002214229.1;Name=WP_002214229.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002214229.1;transl_table=11 NC_008149.1 RefSeq gene 598394 598831 . + . ID=gene538;Name=YPN_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02695;old_locus_tag=YPN_0487 NC_008149.1 Protein Homology CDS 598394 598831 . + 0 ID=cds508;Parent=gene538;Dbxref=Genbank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;product=polyketide cyclase;protein_id=WP_002210371.1;transl_table=11 NC_008149.1 RefSeq gene 598965 599591 . + . ID=gene539;Name=YPN_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02700;old_locus_tag=YPN_0489 NC_008149.1 Protein Homology CDS 598965 599591 . + 0 ID=cds509;Parent=gene539;Dbxref=Genbank:WP_002214230.1;Name=WP_002214230.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002214230.1;transl_table=11 NC_008149.1 RefSeq gene 599607 599987 . + . ID=gene540;Name=YPN_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02705;old_locus_tag=YPN_0490 NC_008149.1 Protein Homology CDS 599607 599987 . + 0 ID=cds510;Parent=gene540;Dbxref=Genbank:WP_002210370.1;Name=WP_002210370.1;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210370.1;transl_table=11 NC_008149.1 RefSeq gene 600272 600676 . + . ID=gene541;Name=YPN_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02710;old_locus_tag=YPN_0491 NC_008149.1 Protein Homology CDS 600272 600676 . + 0 ID=cds511;Parent=gene541;Dbxref=Genbank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;product=enamine deaminase RidA;protein_id=WP_002210369.1;transl_table=11 NC_008149.1 RefSeq gene 600891 601193 . - . ID=gene542;Name=YPN_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02715;old_locus_tag=YPN_0492 NC_008149.1 Protein Homology CDS 600891 601193 . - 0 ID=cds512;Parent=gene542;Dbxref=Genbank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11 NC_008149.1 RefSeq gene 601453 602169 . - . ID=gene543;Name=YPN_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02720;old_locus_tag=YPN_0493 NC_008149.1 Protein Homology CDS 601453 602169 . - 0 ID=cds513;Parent=gene543;Dbxref=Genbank:WP_002210367.1;Name=WP_002210367.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002210367.1;transl_table=11 NC_008149.1 RefSeq gene 602331 603263 . + . ID=gene544;Name=YPN_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02725;old_locus_tag=YPN_0494 NC_008149.1 Protein Homology CDS 602331 603263 . + 0 ID=cds514;Parent=gene544;Dbxref=Genbank:WP_002210366.1;Name=WP_002210366.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210366.1;transl_table=11 NC_008149.1 RefSeq gene 603714 603917 . + . ID=gene545;Name=YPN_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02730;old_locus_tag=YPN_0495 NC_008149.1 Protein Homology CDS 603714 603917 . + 0 ID=cds515;Parent=gene545;Dbxref=Genbank:WP_002210365.1;Name=WP_002210365.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210365.1;transl_table=11 NC_008149.1 RefSeq gene 604013 604225 . + . ID=gene546;Name=YPN_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02735 NC_008149.1 Protein Homology CDS 604013 604225 . + 0 ID=cds516;Parent=gene546;Dbxref=Genbank:WP_002218980.1;Name=WP_002218980.1;gbkey=CDS;product=cell filamentation protein Fic;protein_id=WP_002218980.1;transl_table=11 NC_008149.1 RefSeq gene 604222 604380 . - . ID=gene547;Name=YPN_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02740;old_locus_tag=YPN_0497 NC_008149.1 Protein Homology CDS 604222 604380 . - 0 ID=cds517;Parent=gene547;Dbxref=Genbank:WP_002210363.1;Name=WP_002210363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210363.1;transl_table=11 NC_008149.1 RefSeq gene 604578 604778 . - . ID=gene548;Name=YPN_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02745 NC_008149.1 Protein Homology CDS 604578 604778 . - 0 ID=cds518;Parent=gene548;Dbxref=Genbank:WP_002214239.1;Name=WP_002214239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214239.1;transl_table=11 NC_008149.1 RefSeq gene 604936 605166 . + . ID=gene549;Name=YPN_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02750 NC_008149.1 Protein Homology CDS 604936 605166 . + 0 ID=cds519;Parent=gene549;Dbxref=Genbank:WP_002214241.1;Name=WP_002214241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214241.1;transl_table=11 NC_008149.1 RefSeq repeat_region 605180 605732 . + . ID=id68;gbkey=repeat_region NC_008149.1 RefSeq gene 605299 606681 . + . ID=gene550;Name=YPN_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02755;old_locus_tag=YPN_0498 NC_008149.1 Protein Homology CDS 605299 606681 . + 0 ID=cds520;Parent=gene550;Dbxref=Genbank:WP_002210362.1;Name=WP_002210362.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002210362.1;transl_table=11 NC_008149.1 RefSeq gene 606690 607160 . + . ID=gene551;Name=YPN_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02760;old_locus_tag=YPN_0499 NC_008149.1 Protein Homology CDS 606690 607160 . + 0 ID=cds521;Parent=gene551;Dbxref=Genbank:WP_002210361.1;Name=WP_002210361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210361.1;transl_table=11 NC_008149.1 RefSeq gene 607187 607642 . + . ID=gene552;Name=YPN_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02765;old_locus_tag=YPN_0500 NC_008149.1 Protein Homology CDS 607187 607642 . + 0 ID=cds522;Parent=gene552;Dbxref=Genbank:WP_002210360.1;Name=WP_002210360.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210360.1;transl_table=11 NC_008149.1 RefSeq repeat_region 607647 607867 . + . ID=id69;gbkey=repeat_region NC_008149.1 RefSeq gene 607659 607949 . + . ID=gene553;Name=YPN_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02770;old_locus_tag=YPN_0501 NC_008149.1 Protein Homology CDS 607659 607949 . + 0 ID=cds523;Parent=gene553;Dbxref=Genbank:WP_002217366.1;Name=WP_002217366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217366.1;transl_table=11 NC_008149.1 RefSeq gene 607927 608265 . + . ID=gene554;Name=YPN_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02775;old_locus_tag=YPN_0502 NC_008149.1 Protein Homology CDS 607927 608265 . + 0 ID=cds524;Parent=gene554;Dbxref=Genbank:WP_002217368.1;Name=WP_002217368.1;gbkey=CDS;product=terminase;protein_id=WP_002217368.1;transl_table=11 NC_008149.1 RefSeq gene 608511 608587 . - . ID=gene555;Name=YPN_RS02780;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS02780;old_locus_tag=YPN_r033 NC_008149.1 tRNAscan-SE tRNA 608511 608587 . - . ID=rna30;Parent=gene555;anticodon=(pos:complement(608551..608553));gbkey=tRNA;product=tRNA-Met NC_008149.1 tRNAscan-SE exon 608511 608587 . - . ID=id70;Parent=rna30;anticodon=(pos:complement(608551..608553));gbkey=tRNA;product=tRNA-Met NC_008149.1 RefSeq gene 608783 610621 . - . ID=gene556;Name=YPN_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02785;old_locus_tag=YPN_0503 NC_008149.1 Protein Homology CDS 608783 610621 . - 0 ID=cds525;Parent=gene556;Dbxref=Genbank:WP_002210359.1;Name=WP_002210359.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=WP_002210359.1;transl_table=11 NC_008149.1 RefSeq gene 610779 612527 . - . ID=gene557;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=YPN_RS02790;old_locus_tag=YPN_0504 NC_008149.1 Protein Homology CDS 610779 612527 . - 0 ID=cds526;Parent=gene557;Dbxref=Genbank:WP_002210358.1;Name=WP_002210358.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_002210358.1;transl_table=11 NC_008149.1 RefSeq gene 612663 612878 . - . ID=gene558;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=YPN_RS02795;old_locus_tag=YPN_0505 NC_008149.1 Protein Homology CDS 612663 612878 . - 0 ID=cds527;Parent=gene558;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NC_008149.1 RefSeq gene 613284 614297 . + . ID=gene559;Name=YPN_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02800;old_locus_tag=YPN_0506 NC_008149.1 Protein Homology CDS 613284 614297 . + 0 ID=cds528;Parent=gene559;Dbxref=Genbank:WP_002212201.1;Name=WP_002212201.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=tRNA N6-adenosine threonylcarbamoyltransferase;protein_id=WP_002212201.1;transl_table=11 NC_008149.1 RefSeq gene 614543 615193 . - . ID=gene560;Name=YPN_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02805;old_locus_tag=YPN_0507 NC_008149.1 Protein Homology CDS 614543 615193 . - 0 ID=cds529;Parent=gene560;Dbxref=Genbank:WP_002217581.1;Name=WP_002217581.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002217581.1;transl_table=11 NC_008149.1 RefSeq gene 615301 615660 . + . ID=gene561;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=YPN_RS02810;old_locus_tag=YPN_0508 NC_008149.1 Protein Homology CDS 615301 615660 . + 0 ID=cds530;Parent=gene561;Dbxref=Genbank:WP_002212199.1;Name=WP_002212199.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_002212199.1;transl_table=11 NC_008149.1 RefSeq gene 615934 616752 . + . ID=gene562;Name=YPN_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02815;old_locus_tag=YPN_0509 NC_008149.1 Protein Homology CDS 615934 616752 . + 0 ID=cds531;Parent=gene562;Dbxref=Genbank:WP_002212198.1;Name=WP_002212198.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=undecaprenyl-diphosphatase;protein_id=WP_002212198.1;transl_table=11 NC_008149.1 RefSeq gene 616988 618226 . - . ID=gene563;Name=YPN_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02820;old_locus_tag=YPN_0510 NC_008149.1 Protein Homology CDS 616988 618226 . - 0 ID=cds532;Parent=gene563;Dbxref=Genbank:WP_002212197.1;Name=WP_002212197.1;gbkey=CDS;product=multifunctional CCA protein;protein_id=WP_002212197.1;transl_table=11 NC_008149.1 RefSeq gene 618386 619009 . - . ID=gene564;Name=YPN_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02825;old_locus_tag=YPN_0511 NC_008149.1 Protein Homology CDS 618386 619009 . - 0 ID=cds533;Parent=gene564;Dbxref=Genbank:WP_002212196.1;Name=WP_002212196.1;gbkey=CDS;product=signal transduction protein;protein_id=WP_002212196.1;transl_table=11 NC_008149.1 RefSeq gene 619313 620482 . + . ID=gene565;Name=YPN_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02830;old_locus_tag=YPN_0512 NC_008149.1 Protein Homology CDS 619313 620482 . + 0 ID=cds534;Parent=gene565;Dbxref=Genbank:WP_002231433.1;Name=WP_002231433.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231433.1;transl_table=11 NC_008149.1 RefSeq gene 620791 623646 . + . ID=gene566;Name=YPN_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02835;old_locus_tag=YPN_0513 NC_008149.1 Protein Homology CDS 620791 623646 . + 0 ID=cds535;Parent=gene566;Dbxref=Genbank:WP_002212194.1;Name=WP_002212194.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;product=glutamate--ammonia-ligase adenylyltransferase;protein_id=WP_002212194.1;transl_table=11 NC_008149.1 RefSeq gene 623781 625211 . + . ID=gene567;Name=YPN_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02840;old_locus_tag=YPN_0514 NC_008149.1 Protein Homology CDS 623781 625211 . + 0 ID=cds536;Parent=gene567;Dbxref=Genbank:WP_002212193.1;Name=WP_002212193.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;product=bifunctional protein HldE;protein_id=WP_002212193.1;transl_table=11 NC_008149.1 RefSeq gene 625248 626498 . + . ID=gene568;Name=YPN_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02845;old_locus_tag=YPN_0515 NC_008149.1 Protein Homology CDS 625248 626498 . + 0 ID=cds537;Parent=gene568;Dbxref=Genbank:WP_002212192.1;Name=WP_002212192.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;product=transporter;protein_id=WP_002212192.1;transl_table=11 NC_008149.1 RefSeq repeat_region 626535 626709 . + . ID=id71;gbkey=repeat_region NC_008149.1 RefSeq gene 626823 627104 . - . ID=gene569;Name=YPN_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02850;old_locus_tag=YPN_0516 NC_008149.1 Protein Homology CDS 626823 627104 . - 0 ID=cds538;Parent=gene569;Dbxref=Genbank:WP_002212191.1;Name=WP_002212191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212191.1;transl_table=11 NC_008149.1 RefSeq gene 627140 627484 . - . ID=gene570;Name=YPN_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02855 NC_008149.1 Protein Homology CDS 627140 627484 . - 0 ID=cds539;Parent=gene570;Dbxref=Genbank:WP_014465988.1;Name=WP_014465988.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_014465988.1;transl_table=11 NC_008149.1 RefSeq gene 627673 628326 . + . ID=gene571;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=YPN_RS02860;old_locus_tag=YPN_0517 NC_008149.1 Protein Homology CDS 627673 628326 . + 0 ID=cds540;Parent=gene571;Dbxref=Genbank:WP_002212190.1;Name=WP_002212190.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11 NC_008149.1 RefSeq gene 628751 629533 . + . ID=gene572;Name=YPN_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02865;old_locus_tag=YPN_0518 NC_008149.1 Protein Homology CDS 628751 629533 . + 0 ID=cds541;Parent=gene572;Dbxref=Genbank:WP_002212189.1;Name=WP_002212189.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;product=LigB family dioxygenase;protein_id=WP_002212189.1;transl_table=11 NC_008149.1 RefSeq repeat_region 629534 629904 . + . ID=id72;gbkey=repeat_region NC_008149.1 RefSeq gene 629940 631100 . - . ID=gene573;Name=YPN_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02870;old_locus_tag=YPN_0519 NC_008149.1 Protein Homology CDS 629940 631100 . - 0 ID=cds542;Parent=gene573;Dbxref=Genbank:WP_002212188.1;Name=WP_002212188.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212188.1;transl_table=11 NC_008149.1 RefSeq gene 631110 631793 . - . ID=gene574;Name=YPN_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02875;old_locus_tag=YPN_0520 NC_008149.1 Protein Homology CDS 631110 631793 . - 0 ID=cds543;Parent=gene574;Dbxref=Genbank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;product=membrane protein;protein_id=WP_002357252.1;transl_table=11 NC_008149.1 RefSeq gene 631862 632032 . + . ID=gene575;Name=YPN_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02880 NC_008149.1 Protein Homology CDS 631862 632032 . + 0 ID=cds544;Parent=gene575;Dbxref=Genbank:WP_002223694.1;Name=WP_002223694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223694.1;transl_table=11 NC_008149.1 RefSeq gene 632097 633494 . - . ID=gene576;Name=YPN_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02885;old_locus_tag=YPN_0521 NC_008149.1 Protein Homology CDS 632097 633494 . - 0 ID=cds545;Parent=gene576;Dbxref=Genbank:WP_002212186.1;Name=WP_002212186.1;gbkey=CDS;product=outer membrane channel protein;protein_id=WP_002212186.1;transl_table=11 NC_008149.1 RefSeq gene 633890 634522 . + . ID=gene577;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=YPN_RS02890;old_locus_tag=YPN_0522 NC_008149.1 Protein Homology CDS 633890 634522 . + 0 ID=cds546;Parent=gene577;Dbxref=Genbank:WP_002212184.1;Name=WP_002212184.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=WP_002212184.1;transl_table=11 NC_008149.1 RefSeq gene 634556 634981 . + . ID=gene578;Name=YPN_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02895;old_locus_tag=YPN_0523 NC_008149.1 Protein Homology CDS 634556 634981 . + 0 ID=cds547;Parent=gene578;Dbxref=Genbank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002212183.1;transl_table=11 NC_008149.1 RefSeq gene 635063 635890 . + . ID=gene579;Name=YPN_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02900;old_locus_tag=YPN_0524 NC_008149.1 Protein Homology CDS 635063 635890 . + 0 ID=cds548;Parent=gene579;Dbxref=Genbank:WP_002217438.1;Name=WP_002217438.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002217438.1;transl_table=11 NC_008149.1 RefSeq gene 635890 636471 . + . ID=gene580;Name=YPN_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02905;old_locus_tag=YPN_0525 NC_008149.1 Protein Homology CDS 635890 636471 . + 0 ID=cds549;Parent=gene580;Dbxref=Genbank:WP_002212182.1;Name=WP_002212182.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;product=esterase;protein_id=WP_002212182.1;transl_table=11 NC_008149.1 RefSeq gene 636573 638468 . + . ID=gene581;Name=YPN_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02910;old_locus_tag=YPN_0526 NC_008149.1 Protein Homology CDS 636573 638468 . + 0 ID=cds550;Parent=gene581;Dbxref=Genbank:WP_002212181.1;Name=WP_002212181.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=WP_002212181.1;transl_table=11 NC_008149.1 RefSeq gene 638472 639383 . + . ID=gene582;Name=YPN_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02915;old_locus_tag=YPN_0527 NC_008149.1 Protein Homology CDS 638472 639383 . + 0 ID=cds551;Parent=gene582;Dbxref=Genbank:WP_002212180.1;Name=WP_002212180.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002212180.1;transl_table=11 NC_008149.1 RefSeq gene 639441 640025 . - . ID=gene583;Name=YPN_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02920;old_locus_tag=YPN_0528 NC_008149.1 Protein Homology CDS 639441 640025 . - 0 ID=cds552;Parent=gene583;Dbxref=Genbank:WP_002212179.1;Name=WP_002212179.1;Note=involved in drug resistance;gbkey=CDS;product=NADPH quinone reductase MdaB;protein_id=WP_002212179.1;transl_table=11 NC_008149.1 RefSeq gene 640329 642602 . + . ID=gene584;Name=YPN_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02925;old_locus_tag=YPN_0529 NC_008149.1 Protein Homology CDS 640329 642602 . + 0 ID=cds553;Parent=gene584;Dbxref=Genbank:WP_002212178.1;Name=WP_002212178.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=WP_002212178.1;transl_table=11 NC_008149.1 RefSeq gene 642891 643622 . + . ID=gene585;Name=YPN_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02930;old_locus_tag=YPN_0530 NC_008149.1 Protein Homology CDS 642891 643622 . + 0 ID=cds554;Parent=gene585;Dbxref=Genbank:WP_002212177.1;Name=WP_002212177.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002212177.1;transl_table=11 NC_008149.1 RefSeq gene 643801 645225 . + . ID=gene586;Name=YPN_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02935;old_locus_tag=YPN_0531 NC_008149.1 Protein Homology CDS 643801 645225 . + 0 ID=cds555;Parent=gene586;Dbxref=Genbank:WP_002212176.1;Name=WP_002212176.1;Note=septal ring component that protects the divisome from stress;gbkey=CDS;product=cell division protein FtsP;protein_id=WP_002212176.1;transl_table=11 NC_008149.1 RefSeq gene 645533 647877 . + . ID=gene587;Name=YPN_RS02940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS02940;old_locus_tag=YPN_0532;pseudo=true NC_008149.1 Protein Homology CDS 645533 647877 . + 0 ID=cds556;Parent=gene587;exception=annotated by transcript or proteomic data;gbkey=CDS;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 647899 648732 . - . ID=gene588;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=YPN_RS02945;old_locus_tag=YPN_0534 NC_008149.1 Protein Homology CDS 647899 648732 . - 0 ID=cds557;Parent=gene588;Dbxref=Genbank:WP_002212175.1;Name=WP_002212175.1;Note=methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconic acid reductase A;protein_id=WP_002212175.1;transl_table=11 NC_008149.1 RefSeq gene 648879 649088 . + . ID=gene589;Name=YPN_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02950 NC_008149.1 Protein Homology CDS 648879 649088 . + 0 ID=cds558;Parent=gene589;Dbxref=Genbank:WP_002216186.1;Name=WP_002216186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216186.1;transl_table=11 NC_008149.1 RefSeq gene 649151 650308 . - . ID=gene590;Name=YPN_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02955;old_locus_tag=YPN_0535 NC_008149.1 Protein Homology CDS 649151 650308 . - 0 ID=cds559;Parent=gene590;Dbxref=Genbank:WP_002212174.1;Name=WP_002212174.1;gbkey=CDS;product=aldehyde oxidoreductase;protein_id=WP_002212174.1;transl_table=11 NC_008149.1 RefSeq gene 650706 651599 . + . ID=gene591;Name=YPN_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02960;old_locus_tag=YPN_0536 NC_008149.1 Protein Homology CDS 650706 651599 . + 0 ID=cds560;Parent=gene591;Dbxref=Genbank:WP_002213786.1;Name=WP_002213786.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002213786.1;transl_table=11 NC_008149.1 RefSeq gene 651691 652353 . - . ID=gene592;Name=YPN_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02965;old_locus_tag=YPN_0537 NC_008149.1 Protein Homology CDS 651691 652353 . - 0 ID=cds561;Parent=gene592;Dbxref=Genbank:WP_002212173.1;Name=WP_002212173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212173.1;transl_table=11 NC_008149.1 RefSeq gene 652546 653757 . - . ID=gene593;Name=YPN_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02970;old_locus_tag=YPN_0538 NC_008149.1 Protein Homology CDS 652546 653757 . - 0 ID=cds562;Parent=gene593;Dbxref=Genbank:WP_002212172.1;Name=WP_002212172.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11 NC_008149.1 RefSeq gene 654560 655273 . + . ID=gene594;Name=YPN_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02975;old_locus_tag=YPN_0539 NC_008149.1 Protein Homology CDS 654560 655273 . + 0 ID=cds563;Parent=gene594;Dbxref=Genbank:WP_002353766.1;Name=WP_002353766.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbB;protein_id=WP_002353766.1;transl_table=11 NC_008149.1 RefSeq gene 655277 655708 . + . ID=gene595;Name=YPN_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02980;old_locus_tag=YPN_0540 NC_008149.1 Protein Homology CDS 655277 655708 . + 0 ID=cds564;Parent=gene595;Dbxref=Genbank:WP_002212170.1;Name=WP_002212170.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;product=biopolymer transporter ExbD;protein_id=WP_002212170.1;transl_table=11 NC_008149.1 RefSeq gene 655805 657361 . - . ID=gene596;Name=YPN_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02985;old_locus_tag=YPN_0541 NC_008149.1 Protein Homology CDS 655805 657361 . - 0 ID=cds565;Parent=gene596;Dbxref=Genbank:WP_002212169.1;Name=WP_002212169.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212169.1;transl_table=11 NC_008149.1 RefSeq gene 657386 657959 . - . ID=gene597;Name=YPN_RS02990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS02990;old_locus_tag=YPN_0542;pseudo=true NC_008149.1 Protein Homology CDS 657386 657959 . - 0 ID=cds566;Parent=gene597;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pseudopilin;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 657943 658416 . - . ID=gene598;Name=YPN_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS02995;old_locus_tag=YPN_0543 NC_008149.1 Protein Homology CDS 657943 658416 . - 0 ID=cds567;Parent=gene598;Dbxref=Genbank:WP_002357277.1;Name=WP_002357277.1;gbkey=CDS;product=pilus biosynthesis protein TadE;protein_id=WP_002357277.1;transl_table=11 NC_008149.1 RefSeq gene 658413 659183 . - . ID=gene599;Name=YPN_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03000;old_locus_tag=YPN_0544 NC_008149.1 Protein Homology CDS 658413 659183 . - 0 ID=cds568;Parent=gene599;Dbxref=Genbank:WP_002212166.1;Name=WP_002212166.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212166.1;transl_table=11 NC_008149.1 RefSeq gene 659167 660000 . - . ID=gene600;Name=YPN_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03005;old_locus_tag=YPN_0545 NC_008149.1 Protein Homology CDS 659167 660000 . - 0 ID=cds569;Parent=gene600;Dbxref=Genbank:WP_002212165.1;Name=WP_002212165.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212165.1;transl_table=11 NC_008149.1 RefSeq gene 659997 660872 . - . ID=gene601;Name=YPN_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03010;old_locus_tag=YPN_0546 NC_008149.1 Protein Homology CDS 659997 660872 . - 0 ID=cds570;Parent=gene601;Dbxref=Genbank:WP_002212164.1;Name=WP_002212164.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002212164.1;transl_table=11 NC_008149.1 RefSeq gene 660869 662155 . - . ID=gene602;Name=YPN_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03015;old_locus_tag=YPN_0547 NC_008149.1 Protein Homology CDS 660869 662155 . - 0 ID=cds571;Parent=gene602;Dbxref=Genbank:WP_002213785.1;Name=WP_002213785.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002213785.1;transl_table=11 NC_008149.1 RefSeq gene 662167 663293 . - . ID=gene603;Name=YPN_RS03020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS03020;old_locus_tag=YPN_0549;pseudo=true NC_008149.1 Protein Homology CDS 662167 663293 . - 0 ID=cds572;Parent=gene603;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pilus assembly protein CpaE;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 663304 663594 . - . ID=gene604;Name=YPN_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03025 NC_008149.1 Protein Homology CDS 663304 663594 . - 0 ID=cds573;Parent=gene604;Dbxref=Genbank:WP_002213782.1;Name=WP_002213782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213782.1;transl_table=11 NC_008149.1 RefSeq gene 663591 664040 . - . ID=gene605;Name=YPN_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03030;old_locus_tag=YPN_0550 NC_008149.1 Protein Homology CDS 663591 664040 . - 0 ID=cds574;Parent=gene605;Dbxref=Genbank:WP_002228297.1;Name=WP_002228297.1;gbkey=CDS;product=secretion protein;protein_id=WP_002228297.1;transl_table=11 NC_008149.1 RefSeq gene 664055 664909 . - . ID=gene606;Name=YPN_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03035;old_locus_tag=YPN_0551 NC_008149.1 Protein Homology CDS 664055 664909 . - 0 ID=cds575;Parent=gene606;Dbxref=Genbank:WP_002213778.1;Name=WP_002213778.1;gbkey=CDS;product=pilus assembly protein CpaC;protein_id=WP_002213778.1;transl_table=11 NC_008149.1 RefSeq gene 664906 665772 . - . ID=gene607;Name=YPN_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03040;old_locus_tag=YPN_0552 NC_008149.1 Protein Homology CDS 664906 665772 . - 0 ID=cds576;Parent=gene607;Dbxref=Genbank:WP_002211460.1;Name=WP_002211460.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211460.1;transl_table=11 NC_008149.1 RefSeq gene 665824 666246 . - . ID=gene608;Name=YPN_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03045;old_locus_tag=YPN_0553 NC_008149.1 Protein Homology CDS 665824 666246 . - 0 ID=cds577;Parent=gene608;Dbxref=Genbank:WP_002211459.1;Name=WP_002211459.1;gbkey=CDS;product=tight adherance operon protein;protein_id=WP_002211459.1;transl_table=11 NC_008149.1 RefSeq repeat_region 666297 667014 . + . ID=id73;gbkey=repeat_region NC_008149.1 RefSeq gene 666446 666904 . + . ID=gene609;Name=YPN_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03050;old_locus_tag=YPN_0554 NC_008149.1 Protein Homology CDS 666446 666904 . + 0 ID=cds578;Parent=gene609;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 667257 669737 . + . ID=gene610;Name=YPN_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03055;old_locus_tag=YPN_0555 NC_008149.1 Protein Homology CDS 667257 669737 . + 0 ID=cds579;Parent=gene610;Dbxref=Genbank:WP_002211458.1;Name=WP_002211458.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002211458.1;transl_table=11 NC_008149.1 RefSeq gene 669755 670474 . + . ID=gene611;Name=YPN_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03060;old_locus_tag=YPN_0556 NC_008149.1 Protein Homology CDS 669755 670474 . + 0 ID=cds580;Parent=gene611;Dbxref=Genbank:WP_002211457.1;Name=WP_002211457.1;gbkey=CDS;product=fimbrial chaperone protein;protein_id=WP_002211457.1;transl_table=11 NC_008149.1 RefSeq gene 670499 671605 . + . ID=gene612;Name=YPN_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03065;old_locus_tag=YPN_0557 NC_008149.1 Protein Homology CDS 670499 671605 . + 0 ID=cds581;Parent=gene612;Dbxref=Genbank:WP_002211456.1;Name=WP_002211456.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211456.1;transl_table=11 NC_008149.1 RefSeq repeat_region 671652 671789 . + . ID=id74;gbkey=repeat_region NC_008149.1 RefSeq gene 671817 672896 . - . ID=gene613;Name=YPN_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03070;old_locus_tag=YPN_0558 NC_008149.1 Protein Homology CDS 671817 672896 . - 0 ID=cds582;Parent=gene613;Dbxref=Genbank:WP_002211455.1;Name=WP_002211455.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211455.1;transl_table=11 NC_008149.1 RefSeq gene 673752 674747 . + . ID=gene614;Name=YPN_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03075;old_locus_tag=YPN_0559 NC_008149.1 Protein Homology CDS 673752 674747 . + 0 ID=cds583;Parent=gene614;Dbxref=Genbank:WP_002211454.1;Name=WP_002211454.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211454.1;transl_table=11 NC_008149.1 RefSeq gene 674839 675408 . - . ID=gene615;Name=YPN_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03080;old_locus_tag=YPN_0560 NC_008149.1 Protein Homology CDS 674839 675408 . - 0 ID=cds584;Parent=gene615;Dbxref=Genbank:WP_002228082.1;Name=WP_002228082.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002228082.1;transl_table=11 NC_008149.1 RefSeq gene 675656 677753 . - . ID=gene616;Name=YPN_RS03085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS03085;pseudo=true NC_008149.1 Protein Homology CDS 675656 677753 . - 0 ID=cds585;Parent=gene616;exception=annotated by transcript or proteomic data;gbkey=CDS;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 677740 678873 . - . ID=gene617;Name=YPN_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03090;old_locus_tag=YPN_0564 NC_008149.1 Protein Homology CDS 677740 678873 . - 0 ID=cds586;Parent=gene617;Dbxref=Genbank:WP_002211451.1;Name=WP_002211451.1;gbkey=CDS;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211451.1;transl_table=11 NC_008149.1 RefSeq gene 678873 679646 . - . ID=gene618;Name=YPN_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03095;old_locus_tag=YPN_0565 NC_008149.1 Protein Homology CDS 678873 679646 . - 0 ID=cds587;Parent=gene618;Dbxref=Genbank:WP_002213766.1;Name=WP_002213766.1;gbkey=CDS;product=flagellar biosynthesis protein FliR;protein_id=WP_002213766.1;transl_table=11 NC_008149.1 RefSeq gene 679653 679925 . - . ID=gene619;Name=YPN_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03100;old_locus_tag=YPN_0566 NC_008149.1 Protein Homology CDS 679653 679925 . - 0 ID=cds588;Parent=gene619;Dbxref=Genbank:WP_002211449.1;Name=WP_002211449.1;gbkey=CDS;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211449.1;transl_table=11 NC_008149.1 RefSeq gene 679927 680697 . - . ID=gene620;Name=YPN_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03105;old_locus_tag=YPN_0567 NC_008149.1 Protein Homology CDS 679927 680697 . - 0 ID=cds589;Parent=gene620;Dbxref=Genbank:WP_002211448.1;Name=WP_002211448.1;gbkey=CDS;product=flagellar biosynthesis protein FliP;protein_id=WP_002211448.1;transl_table=11 NC_008149.1 RefSeq gene 680694 681107 . - . ID=gene621;Name=YPN_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03110;old_locus_tag=YPN_0568 NC_008149.1 Protein Homology CDS 680694 681107 . - 0 ID=cds590;Parent=gene621;Dbxref=Genbank:WP_002211447.1;Name=WP_002211447.1;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=WP_002211447.1;transl_table=11 NC_008149.1 RefSeq gene 681100 681999 . - . ID=gene622;Name=YPN_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03115;old_locus_tag=YPN_0569 NC_008149.1 Protein Homology CDS 681100 681999 . - 0 ID=cds591;Parent=gene622;Dbxref=Genbank:WP_002211446.1;Name=WP_002211446.1;gbkey=CDS;product=flagellar motor switch protein FliM;protein_id=WP_002211446.1;transl_table=11 NC_008149.1 RefSeq gene 682522 683550 . + . ID=gene623;Name=YPN_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03120;old_locus_tag=YPN_0570 NC_008149.1 Protein Homology CDS 682522 683550 . + 0 ID=cds592;Parent=gene623;Dbxref=Genbank:WP_002211445.1;Name=WP_002211445.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002211445.1;transl_table=11 NC_008149.1 RefSeq gene 683567 683947 . + . ID=gene624;Name=YPN_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03125;old_locus_tag=YPN_0571 NC_008149.1 Protein Homology CDS 683567 683947 . + 0 ID=cds593;Parent=gene624;Dbxref=Genbank:WP_002211444.1;Name=WP_002211444.1;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=WP_002211444.1;transl_table=11 NC_008149.1 RefSeq gene 683957 685597 . + . ID=gene625;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=YPN_RS03130;old_locus_tag=YPN_0572 NC_008149.1 Protein Homology CDS 683957 685597 . + 0 ID=cds594;Parent=gene625;Dbxref=Genbank:WP_002211443.1;Name=WP_002211443.1;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=fliF;product=flagellar M-ring protein FliF;protein_id=WP_002211443.1;transl_table=11 NC_008149.1 RefSeq gene 685569 686612 . + . ID=gene626;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPN_RS03135;old_locus_tag=YPN_0573 NC_008149.1 Protein Homology CDS 685569 686612 . + 0 ID=cds595;Parent=gene626;Dbxref=Genbank:WP_002211442.1;Name=WP_002211442.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211442.1;transl_table=11 NC_008149.1 RefSeq gene 686617 687333 . + . ID=gene627;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPN_RS03140;old_locus_tag=YPN_0574 NC_008149.1 Protein Homology CDS 686617 687333 . + 0 ID=cds596;Parent=gene627;Dbxref=Genbank:WP_002213763.1;Name=WP_002213763.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein FliH;protein_id=WP_002213763.1;transl_table=11 NC_008149.1 RefSeq gene 687326 688666 . + . ID=gene628;Name=YPN_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03145;old_locus_tag=YPN_0575 NC_008149.1 Protein Homology CDS 687326 688666 . + 0 ID=cds597;Parent=gene628;Dbxref=Genbank:WP_002211440.1;Name=WP_002211440.1;gbkey=CDS;product=flagellum-specific ATP synthase;protein_id=WP_002211440.1;transl_table=11 NC_008149.1 RefSeq gene 688670 689107 . + . ID=gene629;Name=YPN_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03150;old_locus_tag=YPN_0576 NC_008149.1 Protein Homology CDS 688670 689107 . + 0 ID=cds598;Parent=gene629;Dbxref=Genbank:WP_002223686.1;Name=WP_002223686.1;gbkey=CDS;product=flagellar export protein FliJ;protein_id=WP_002223686.1;transl_table=11 NC_008149.1 RefSeq gene 689435 689860 . - . ID=gene630;Name=YPN_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03155;old_locus_tag=YPN_0577 NC_008149.1 Protein Homology CDS 689435 689860 . - 0 ID=cds599;Parent=gene630;Dbxref=Genbank:WP_002211438.1;Name=WP_002211438.1;gbkey=CDS;product=flagellar protein FlgN;protein_id=WP_002211438.1;transl_table=11 NC_008149.1 RefSeq gene 689867 690133 . - . ID=gene631;Name=YPN_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03160;old_locus_tag=YPN_0578 NC_008149.1 Protein Homology CDS 689867 690133 . - 0 ID=cds600;Parent=gene631;Dbxref=Genbank:WP_002211437.1;Name=WP_002211437.1;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211437.1;transl_table=11 NC_008149.1 RefSeq gene 690362 691210 . - . ID=gene632;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YPN_RS03165;old_locus_tag=YPN_0579 NC_008149.1 Protein Homology CDS 690362 691210 . - 0 ID=cds601;Parent=gene632;Dbxref=Genbank:WP_002211436.1;Name=WP_002211436.1;Note=required for the assembly of the flagellar basal body P-ring%3B the Vibrio parahaemolyticus protein involved with the synthesis of the lateral flagella;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002211436.1;transl_table=11 NC_008149.1 RefSeq gene 691268 691714 . + . ID=gene633;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=YPN_RS03170;old_locus_tag=YPN_0580 NC_008149.1 Protein Homology CDS 691268 691714 . + 0 ID=cds602;Parent=gene633;Dbxref=Genbank:WP_002211435.1;Name=WP_002211435.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211435.1;transl_table=11 NC_008149.1 RefSeq gene 691717 692142 . + . ID=gene634;Name=YPN_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03175;old_locus_tag=YPN_0581 NC_008149.1 Protein Homology CDS 691717 692142 . + 0 ID=cds603;Parent=gene634;Dbxref=Genbank:WP_002211434.1;Name=WP_002211434.1;gbkey=CDS;product=flagellar basal body rod protein FlgC;protein_id=WP_002211434.1;transl_table=11 NC_008149.1 RefSeq gene 692145 692801 . + . ID=gene635;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPN_RS03180;old_locus_tag=YPN_0582 NC_008149.1 Protein Homology CDS 692145 692801 . + 0 ID=cds604;Parent=gene635;Dbxref=Genbank:WP_002211433.1;Name=WP_002211433.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein FlgD;protein_id=WP_002211433.1;transl_table=11 NC_008149.1 RefSeq gene 692856 694097 . + . ID=gene636;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPN_RS03185;old_locus_tag=YPN_0583 NC_008149.1 Protein Homology CDS 692856 694097 . + 0 ID=cds605;Parent=gene636;Dbxref=Genbank:WP_002211432.1;Name=WP_002211432.1;Note=the hook connects flagellar basal body to the flagellar filament%3B Vibrio parahaemolyticus protein is associated with the lateral flagella;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211432.1;transl_table=11 NC_008149.1 RefSeq gene 694097 694828 . + . ID=gene637;Name=YPN_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03190;old_locus_tag=YPN_0584 NC_008149.1 Protein Homology CDS 694097 694828 . + 0 ID=cds606;Parent=gene637;Dbxref=Genbank:WP_002223685.1;Name=WP_002223685.1;gbkey=CDS;product=flagellar basal body rod protein FlgF;protein_id=WP_002223685.1;transl_table=11 NC_008149.1 RefSeq gene 694896 695681 . + . ID=gene638;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YPN_RS03195;old_locus_tag=YPN_0585 NC_008149.1 Protein Homology CDS 694896 695681 . + 0 ID=cds607;Parent=gene638;Dbxref=Genbank:WP_002211430.1;Name=WP_002211430.1;Note=makes up the distal portion of the flagellar basal body rod%3B Bradyrhizobium has one thick flagellum and several thin flagella%3B the Bradyrhizobium protein in this cluster is associated with the thick flagella;gbkey=CDS;gene=flgG;product=flagellar basal body rod protein FlgG;protein_id=WP_002211430.1;transl_table=11 NC_008149.1 RefSeq gene 695716 696381 . + . ID=gene639;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=YPN_RS03200;old_locus_tag=YPN_0586 NC_008149.1 Protein Homology CDS 695716 696381 . + 0 ID=cds608;Parent=gene639;Dbxref=Genbank:WP_002211429.1;Name=WP_002211429.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B the Yersinia have 2 copies of flgH;gbkey=CDS;gene=flgH;product=flagellar L-ring protein FlgH;protein_id=WP_002211429.1;transl_table=11 NC_008149.1 RefSeq gene 696428 697570 . + . ID=gene640;Name=YPN_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03205;old_locus_tag=YPN_0587 NC_008149.1 Protein Homology CDS 696428 697570 . + 0 ID=cds609;Parent=gene640;Dbxref=Genbank:WP_042468851.1;Name=WP_042468851.1;gbkey=CDS;product=flagellar P-ring protein FlgI;protein_id=WP_042468851.1;transl_table=11 NC_008149.1 RefSeq gene 697580 697873 . + . ID=gene641;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPN_RS03210;old_locus_tag=YPN_0588 NC_008149.1 Protein Homology CDS 697580 697873 . + 0 ID=cds610;Parent=gene641;Dbxref=Genbank:WP_002211427.1;Name=WP_002211427.1;Note=FlgJ%3B flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space%3B like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain;gbkey=CDS;gene=flgJ;product=peptidoglycan hydrolase;protein_id=WP_002211427.1;transl_table=11 NC_008149.1 RefSeq gene 697986 699347 . + . ID=gene642;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPN_RS03215;old_locus_tag=YPN_0589 NC_008149.1 Protein Homology CDS 697986 699347 . + 0 ID=cds611;Parent=gene642;Dbxref=Genbank:WP_002211426.1;Name=WP_002211426.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211426.1;transl_table=11 NC_008149.1 RefSeq gene 699376 700299 . + . ID=gene643;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPN_RS03220;old_locus_tag=YPN_0590 NC_008149.1 Protein Homology CDS 699376 700299 . + 0 ID=cds612;Parent=gene643;Dbxref=Genbank:WP_002211425.1;Name=WP_002211425.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211425.1;transl_table=11 NC_008149.1 RefSeq gene 700311 701324 . + . ID=gene644;Name=YPN_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03225;old_locus_tag=YPN_0591 NC_008149.1 Protein Homology CDS 700311 701324 . + 0 ID=cds613;Parent=gene644;Dbxref=Genbank:WP_002211424.1;Name=WP_002211424.1;gbkey=CDS;product=flagellar hook associated protein lafW;protein_id=WP_002211424.1;transl_table=11 NC_008149.1 RefSeq gene 701488 701934 . - . ID=gene645;Name=YPN_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03230;old_locus_tag=YPN_0592 NC_008149.1 Protein Homology CDS 701488 701934 . - 0 ID=cds614;Parent=gene645;Dbxref=Genbank:WP_002211423.1;Name=WP_002211423.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211423.1;transl_table=11 NC_008149.1 RefSeq gene 701915 702961 . - . ID=gene646;Name=YPN_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03235;old_locus_tag=YPN_0593 NC_008149.1 Protein Homology CDS 701915 702961 . - 0 ID=cds615;Parent=gene646;Dbxref=Genbank:WP_002211422.1;Name=WP_002211422.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211422.1;transl_table=11 NC_008149.1 RefSeq gene 703587 704810 . + . ID=gene647;Name=YPN_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03240;old_locus_tag=YPN_0594 NC_008149.1 Protein Homology CDS 703587 704810 . + 0 ID=cds616;Parent=gene647;Dbxref=Genbank:WP_002211421.1;Name=WP_002211421.1;gbkey=CDS;product=flagellin;protein_id=WP_002211421.1;transl_table=11 NC_008149.1 RefSeq repeat_region 704847 706289 . + . ID=id75;gbkey=repeat_region NC_008149.1 RefSeq gene 704904 705419 . + . ID=gene648;Name=YPN_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03245;old_locus_tag=YPN_0595 NC_008149.1 Protein Homology CDS 704904 705419 . + 0 ID=cds617;Parent=gene648;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_008149.1 RefSeq gene 705473 706258 . + . ID=gene649;Name=YPN_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03250;old_locus_tag=YPN_0596 NC_008149.1 Protein Homology CDS 705473 706258 . + 0 ID=cds618;Parent=gene649;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_008149.1 RefSeq gene 706525 708642 . + . ID=gene650;Name=YPN_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03255;old_locus_tag=YPN_0597 NC_008149.1 Protein Homology CDS 706525 708642 . + 0 ID=cds619;Parent=gene650;Dbxref=Genbank:WP_002228303.1;Name=WP_002228303.1;gbkey=CDS;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002228303.1;transl_table=11 NC_008149.1 RefSeq gene 708767 709651 . + . ID=gene651;Name=YPN_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03260;old_locus_tag=YPN_0598 NC_008149.1 Protein Homology CDS 708767 709651 . + 0 ID=cds620;Parent=gene651;Dbxref=Genbank:WP_002209260.1;Name=WP_002209260.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11 NC_008149.1 RefSeq gene 709838 711832 . + . ID=gene652;Name=YPN_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03265;old_locus_tag=YPN_0599 NC_008149.1 Protein Homology CDS 709838 711832 . + 0 ID=cds621;Parent=gene652;Dbxref=Genbank:WP_002209261.1;Name=WP_002209261.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;product=DEAD/DEAH box family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11 NC_008149.1 RefSeq gene 711852 712025 . + . ID=gene653;Name=YPN_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03270;old_locus_tag=YPN_0600 NC_008149.1 Protein Homology CDS 711852 712025 . + 0 ID=cds622;Parent=gene653;Dbxref=Genbank:WP_002209262.1;Name=WP_002209262.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209262.1;transl_table=11 NC_008149.1 RefSeq gene 712068 712436 . + . ID=gene654;Name=YPN_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03275;old_locus_tag=YPN_0601 NC_008149.1 Protein Homology CDS 712068 712436 . + 0 ID=cds623;Parent=gene654;Dbxref=Genbank:WP_002214818.1;Name=WP_002214818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214818.1;transl_table=11 NC_008149.1 RefSeq gene 712460 712771 . + . ID=gene655;Name=YPN_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03280;old_locus_tag=YPN_0602 NC_008149.1 Protein Homology CDS 712460 712771 . + 0 ID=cds624;Parent=gene655;Dbxref=Genbank:WP_002209263.1;Name=WP_002209263.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209263.1;transl_table=11 NC_008149.1 RefSeq repeat_region 712802 712976 . + . ID=id76;gbkey=repeat_region NC_008149.1 RefSeq gene 713026 714081 . - . ID=gene656;Name=YPN_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03285;old_locus_tag=YPN_0603 NC_008149.1 Protein Homology CDS 713026 714081 . - 0 ID=cds625;Parent=gene656;Dbxref=Genbank:WP_002214817.1;Name=WP_002214817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214817.1;transl_table=11 NC_008149.1 RefSeq gene 714589 715749 . + . ID=gene657;Name=YPN_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03290;old_locus_tag=YPN_0604 NC_008149.1 Protein Homology CDS 714589 715749 . + 0 ID=cds626;Parent=gene657;Dbxref=Genbank:WP_002209266.1;Name=WP_002209266.1;gbkey=CDS;product=acriflavine resistance protein E;protein_id=WP_002209266.1;transl_table=11 NC_008149.1 RefSeq gene 715753 718878 . + . ID=gene658;Name=YPN_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03295;old_locus_tag=YPN_0605 NC_008149.1 Protein Homology CDS 715753 718878 . + 0 ID=cds627;Parent=gene658;Dbxref=Genbank:WP_002209267.1;Name=WP_002209267.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002209267.1;transl_table=11 NC_008149.1 RefSeq gene 718880 720286 . + . ID=gene659;Name=YPN_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03300;old_locus_tag=YPN_0606 NC_008149.1 Protein Homology CDS 718880 720286 . + 0 ID=cds628;Parent=gene659;Dbxref=Genbank:WP_002209268.1;Name=WP_002209268.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002209268.1;transl_table=11 NC_008149.1 RefSeq gene 720427 721305 . - . ID=gene660;Name=YPN_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03305;old_locus_tag=YPN_0607 NC_008149.1 Protein Homology CDS 720427 721305 . - 0 ID=cds629;Parent=gene660;Dbxref=Genbank:WP_002209269.1;Name=WP_002209269.1;gbkey=CDS;product=protease;protein_id=WP_002209269.1;transl_table=11 NC_008149.1 RefSeq gene 721317 722312 . - . ID=gene661;Name=YPN_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03310;old_locus_tag=YPN_0608 NC_008149.1 Protein Homology CDS 721317 722312 . - 0 ID=cds630;Parent=gene661;Dbxref=Genbank:WP_002209270.1;Name=WP_002209270.1;gbkey=CDS;product=protease;protein_id=WP_002209270.1;transl_table=11 NC_008149.1 RefSeq gene 722422 722547 . - . ID=gene662;Name=YPN_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03315;old_locus_tag=YPN_0609 NC_008149.1 Protein Homology CDS 722422 722547 . - 0 ID=cds631;Parent=gene662;Dbxref=Genbank:WP_002209271.1;Name=WP_002209271.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209271.1;transl_table=11 NC_008149.1 RefSeq gene 722628 723149 . + . ID=gene663;Name=YPN_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03320;old_locus_tag=YPN_0610 NC_008149.1 Protein Homology CDS 722628 723149 . + 0 ID=cds632;Parent=gene663;Dbxref=Genbank:WP_002209272.1;Name=WP_002209272.1;gbkey=CDS;product=SCP-2 sterol transfer family protein;protein_id=WP_002209272.1;transl_table=11 NC_008149.1 RefSeq gene 723143 723649 . + . ID=gene664;Name=YPN_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03325;old_locus_tag=YPN_0611 NC_008149.1 Protein Homology CDS 723143 723649 . + 0 ID=cds633;Parent=gene664;Dbxref=Genbank:WP_002209273.1;Name=WP_002209273.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209273.1;transl_table=11 NC_008149.1 RefSeq repeat_region 723726 723857 . + . ID=id77;gbkey=repeat_region NC_008149.1 RefSeq gene 723824 724111 . - . ID=gene665;Name=YPN_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03330;old_locus_tag=YPN_0612 NC_008149.1 Protein Homology CDS 723824 724111 . - 0 ID=cds634;Parent=gene665;Dbxref=Genbank:WP_002209274.1;Name=WP_002209274.1;gbkey=CDS;product=nuclease;protein_id=WP_002209274.1;transl_table=11 NC_008149.1 RefSeq gene 724342 726360 . - . ID=gene666;Name=YPN_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03335;old_locus_tag=YPN_0613 NC_008149.1 Protein Homology CDS 724342 726360 . - 0 ID=cds635;Parent=gene666;Dbxref=Genbank:WP_002209275.1;Name=WP_002209275.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209275.1;transl_table=11 NC_008149.1 RefSeq gene 726384 727607 . - . ID=gene667;Name=YPN_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03340;old_locus_tag=YPN_0614 NC_008149.1 Protein Homology CDS 726384 727607 . - 0 ID=cds636;Parent=gene667;Dbxref=Genbank:WP_002209276.1;Name=WP_002209276.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209276.1;transl_table=11 NC_008149.1 RefSeq gene 728168 729481 . + . ID=gene668;Name=YPN_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03345;old_locus_tag=YPN_0615 NC_008149.1 Protein Homology CDS 728168 729481 . + 0 ID=cds637;Parent=gene668;Dbxref=Genbank:WP_002209277.1;Name=WP_002209277.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209277.1;transl_table=11 NC_008149.1 RefSeq gene 729489 730373 . + . ID=gene669;Name=YPN_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03350;old_locus_tag=YPN_0616 NC_008149.1 Protein Homology CDS 729489 730373 . + 0 ID=cds638;Parent=gene669;Dbxref=Genbank:WP_002209278.1;Name=WP_002209278.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209278.1;transl_table=11 NC_008149.1 RefSeq gene 730392 731231 . + . ID=gene670;Name=YPN_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03355;old_locus_tag=YPN_0617 NC_008149.1 Protein Homology CDS 730392 731231 . + 0 ID=cds639;Parent=gene670;Dbxref=Genbank:WP_002209279.1;Name=WP_002209279.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209279.1;transl_table=11 NC_008149.1 RefSeq gene 731243 732337 . + . ID=gene671;Name=YPN_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03360;old_locus_tag=YPN_0618 NC_008149.1 Protein Homology CDS 731243 732337 . + 0 ID=cds640;Parent=gene671;Dbxref=Genbank:WP_002209280.1;Name=WP_002209280.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209280.1;transl_table=11 NC_008149.1 RefSeq gene 732352 733518 . + . ID=gene672;Name=YPN_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03365;old_locus_tag=YPN_0619 NC_008149.1 Protein Homology CDS 732352 733518 . + 0 ID=cds641;Parent=gene672;Dbxref=Genbank:WP_002209281.1;Name=WP_002209281.1;gbkey=CDS;product=alginate lyase;protein_id=WP_002209281.1;transl_table=11 NC_008149.1 RefSeq gene 733617 734060 . + . ID=gene673;Name=YPN_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03370;old_locus_tag=YPN_0620 NC_008149.1 Protein Homology CDS 733617 734060 . + 0 ID=cds642;Parent=gene673;Dbxref=Genbank:WP_002209282.1;Name=WP_002209282.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209282.1;transl_table=11 NC_008149.1 RefSeq gene 734212 734850 . + . ID=gene674;Name=YPN_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03375;old_locus_tag=YPN_0621 NC_008149.1 Protein Homology CDS 734212 734850 . + 0 ID=cds643;Parent=gene674;Dbxref=Genbank:WP_002209283.1;Name=WP_002209283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209283.1;transl_table=11 NC_008149.1 RefSeq gene 734863 735615 . - . ID=gene675;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=YPN_RS03380;old_locus_tag=YPN_0622 NC_008149.1 Protein Homology CDS 734863 735615 . - 0 ID=cds644;Parent=gene675;Dbxref=Genbank:WP_002209284.1;Name=WP_002209284.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=phosphonate metabolism protein PhnP;protein_id=WP_002209284.1;transl_table=11 NC_008149.1 RefSeq gene 735606 736187 . - . ID=gene676;Name=YPN_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03385;old_locus_tag=YPN_0623 NC_008149.1 Protein Homology CDS 735606 736187 . - 0 ID=cds645;Parent=gene676;Dbxref=Genbank:WP_002209285.1;Name=WP_002209285.1;gbkey=CDS;product=ribose 1%2C5-bisphosphate phosphokinase PhnN;protein_id=WP_002209285.1;transl_table=11 NC_008149.1 RefSeq gene 736187 737323 . - . ID=gene677;Name=YPN_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03390;old_locus_tag=YPN_0624 NC_008149.1 Protein Homology CDS 736187 737323 . - 0 ID=cds646;Parent=gene677;Dbxref=Genbank:WP_002209286.1;Name=WP_002209286.1;gbkey=CDS;product=phosphonate metabolism protein PhnM;protein_id=WP_002209286.1;transl_table=11 NC_008149.1 RefSeq gene 737320 738039 . - . ID=gene678;Name=YPN_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03395;old_locus_tag=YPN_0625 NC_008149.1 Protein Homology CDS 737320 738039 . - 0 ID=cds647;Parent=gene678;Dbxref=Genbank:WP_002209287.1;Name=WP_002209287.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002209287.1;transl_table=11 NC_008149.1 RefSeq gene 738428 739219 . - . ID=gene679;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=YPN_RS03400;old_locus_tag=YPN_0626 NC_008149.1 Protein Homology CDS 738428 739219 . - 0 ID=cds648;Parent=gene679;Dbxref=Genbank:WP_002209288.1;Name=WP_002209288.1;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase;protein_id=WP_002209288.1;transl_table=11 NC_008149.1 RefSeq gene 739219 740100 . - . ID=gene680;Name=YPN_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03405;old_locus_tag=YPN_0627 NC_008149.1 Protein Homology CDS 739219 740100 . - 0 ID=cds649;Parent=gene680;Dbxref=Genbank:WP_002209289.1;Name=WP_002209289.1;Note=required for use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnJ;protein_id=WP_002209289.1;transl_table=11 NC_008149.1 RefSeq gene 740093 741271 . - . ID=gene681;Name=YPN_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03410;old_locus_tag=YPN_0628 NC_008149.1 Protein Homology CDS 740093 741271 . - 0 ID=cds650;Parent=gene681;Dbxref=Genbank:WP_002209290.1;Name=WP_002209290.1;Note=required for the use of phosphonate and phosphite;gbkey=CDS;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_002209290.1;transl_table=11 NC_008149.1 RefSeq gene 741429 741896 . - . ID=gene682;Name=YPN_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03415;old_locus_tag=YPN_0630 NC_008149.1 Protein Homology CDS 741429 741896 . - 0 ID=cds651;Parent=gene682;Dbxref=Genbank:WP_011566144.1;Name=WP_011566144.1;gbkey=CDS;product=PhnH protein;protein_id=WP_011566144.1;transl_table=11 NC_008149.1 RefSeq gene 741896 742372 . - . ID=gene683;Name=YPN_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03420;old_locus_tag=YPN_0631 NC_008149.1 Protein Homology CDS 741896 742372 . - 0 ID=cds652;Parent=gene683;Dbxref=Genbank:WP_002209292.1;Name=WP_002209292.1;gbkey=CDS;product=phosphonate metabolism protein PhnG;protein_id=WP_002209292.1;transl_table=11 NC_008149.1 RefSeq gene 742373 743098 . - . ID=gene684;Name=YPN_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03425;old_locus_tag=YPN_0632 NC_008149.1 Protein Homology CDS 742373 743098 . - 0 ID=cds653;Parent=gene684;Dbxref=Genbank:WP_002209293.1;Name=WP_002209293.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_002209293.1;transl_table=11 NC_008149.1 RefSeq gene 743426 743890 . - . ID=gene685;Name=YPN_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03430;old_locus_tag=YPN_0633 NC_008149.1 Protein Homology CDS 743426 743890 . - 0 ID=cds654;Parent=gene685;Dbxref=Genbank:WP_025470743.1;Name=WP_025470743.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_025470743.1;transl_table=11 NC_008149.1 RefSeq gene 744067 746205 . - . ID=gene686;Name=YPN_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03435;old_locus_tag=YPN_0634 NC_008149.1 Protein Homology CDS 744067 746205 . - 0 ID=cds655;Parent=gene686;Dbxref=Genbank:WP_002209296.1;Name=WP_002209296.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;product=ribonucleoside triphosphate reductase;protein_id=WP_002209296.1;transl_table=11 NC_008149.1 RefSeq gene 746582 747298 . - . ID=gene687;Name=YPN_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03440;old_locus_tag=YPN_0635 NC_008149.1 Protein Homology CDS 746582 747298 . - 0 ID=cds656;Parent=gene687;Dbxref=Genbank:WP_002209297.1;Name=WP_002209297.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209297.1;transl_table=11 NC_008149.1 RefSeq gene 747285 748163 . - . ID=gene688;Name=YPN_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03445;old_locus_tag=YPN_0636 NC_008149.1 Protein Homology CDS 747285 748163 . - 0 ID=cds657;Parent=gene688;Dbxref=Genbank:WP_002209298.1;Name=WP_002209298.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11 NC_008149.1 RefSeq gene 748156 748992 . - . ID=gene689;Name=YPN_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03450;old_locus_tag=YPN_0637 NC_008149.1 Protein Homology CDS 748156 748992 . - 0 ID=cds658;Parent=gene689;Dbxref=Genbank:WP_002209299.1;Name=WP_002209299.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209299.1;transl_table=11 NC_008149.1 RefSeq gene 749011 750060 . - . ID=gene690;Name=YPN_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03455;old_locus_tag=YPN_0638 NC_008149.1 Protein Homology CDS 749011 750060 . - 0 ID=cds659;Parent=gene690;Dbxref=Genbank:WP_002209300.1;Name=WP_002209300.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002209300.1;transl_table=11 NC_008149.1 RefSeq gene 750156 751723 . - . ID=gene691;Name=YPN_RS03460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS03460;old_locus_tag=YPN_0640;pseudo=true NC_008149.1 Protein Homology CDS 750156 751723 . - 0 ID=cds660;Parent=gene691;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq repeat_region 751919 752088 . + . ID=id78;gbkey=repeat_region NC_008149.1 RefSeq gene 752362 752820 . + . ID=gene692;Name=YPN_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03465;old_locus_tag=YPN_0641 NC_008149.1 Protein Homology CDS 752362 752820 . + 0 ID=cds661;Parent=gene692;Dbxref=Genbank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209301.1;transl_table=11 NC_008149.1 RefSeq gene 753127 754134 . - . ID=gene693;Name=YPN_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03470;old_locus_tag=YPN_0642 NC_008149.1 Protein Homology CDS 753127 754134 . - 0 ID=cds662;Parent=gene693;Dbxref=Genbank:WP_002209302.1;Name=WP_002209302.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=WP_002209302.1;transl_table=11 NC_008149.1 RefSeq gene 754346 754777 . + . ID=gene694;Name=YPN_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03475;old_locus_tag=YPN_0643 NC_008149.1 Protein Homology CDS 754346 754777 . + 0 ID=cds663;Parent=gene694;Dbxref=Genbank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;product=RNase E inhibitor protein;protein_id=WP_002209303.1;transl_table=11 NC_008149.1 RefSeq gene 754987 755490 . - . ID=gene695;Name=YPN_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03480;old_locus_tag=YPN_0644 NC_008149.1 Protein Homology CDS 754987 755490 . - 0 ID=cds664;Parent=gene695;Dbxref=Genbank:WP_002223170.1;Name=WP_002223170.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002223170.1;transl_table=11 NC_008149.1 RefSeq gene 755633 758530 . - . ID=gene696;Name=YPN_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03485;old_locus_tag=YPN_0645 NC_008149.1 Protein Homology CDS 755633 758530 . - 0 ID=cds665;Parent=gene696;Dbxref=Genbank:WP_002209307.1;Name=WP_002209307.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_002209307.1;transl_table=11 NC_008149.1 RefSeq gene 758543 758992 . - . ID=gene697;Name=YPN_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03490;old_locus_tag=YPN_0646 NC_008149.1 Protein Homology CDS 758543 758992 . - 0 ID=cds666;Parent=gene697;Dbxref=Genbank:WP_002209309.1;Name=WP_002209309.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_002209309.1;transl_table=11 NC_008149.1 RefSeq gene 759143 760654 . - . ID=gene698;Name=YPN_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03495;old_locus_tag=YPN_0647 NC_008149.1 Protein Homology CDS 759143 760654 . - 0 ID=cds667;Parent=gene698;Dbxref=Genbank:WP_002209310.1;Name=WP_002209310.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=cytosol aminopeptidase;protein_id=WP_002209310.1;transl_table=11 NC_008149.1 RefSeq gene 760934 762028 . + . ID=gene699;Name=YPN_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03500;old_locus_tag=YPN_0648 NC_008149.1 Protein Homology CDS 760934 762028 . + 0 ID=cds668;Parent=gene699;Dbxref=Genbank:WP_002209311.1;Name=WP_002209311.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;product=LPS export ABC transporter permease LptF;protein_id=WP_002209311.1;transl_table=11 NC_008149.1 RefSeq gene 762028 763104 . + . ID=gene700;Name=YPN_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03505;old_locus_tag=YPN_0649 NC_008149.1 Protein Homology CDS 762028 763104 . + 0 ID=cds669;Parent=gene700;Dbxref=Genbank:WP_002223173.1;Name=WP_002223173.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;product=LPS export ABC transporter permease LptG;protein_id=WP_002223173.1;transl_table=11 NC_008149.1 RefSeq gene 763209 763293 . + . ID=gene701;Name=YPN_RS03510;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS03510;old_locus_tag=YPN_r036 NC_008149.1 tRNAscan-SE tRNA 763209 763293 . + . ID=rna31;Parent=gene701;anticodon=(pos:763243..763245);gbkey=tRNA;product=tRNA-Leu NC_008149.1 tRNAscan-SE exon 763209 763293 . + . ID=id79;Parent=rna31;anticodon=(pos:763243..763245);gbkey=tRNA;product=tRNA-Leu NC_008149.1 RefSeq repeat_region 763323 764209 . + . ID=id80;gbkey=repeat_region NC_008149.1 RefSeq gene 763331 763486 . + . ID=gene702;Name=YPN_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03515 NC_008149.1 Protein Homology CDS 763331 763486 . + 0 ID=cds670;Parent=gene702;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 763476 763934 . + . ID=gene703;Name=YPN_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03520;old_locus_tag=YPN_0650 NC_008149.1 Protein Homology CDS 763476 763934 . + 0 ID=cds671;Parent=gene703;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 764202 765461 . + . ID=gene704;Name=YPN_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03525;old_locus_tag=YPN_0651 NC_008149.1 Protein Homology CDS 764202 765461 . + 0 ID=cds672;Parent=gene704;Dbxref=Genbank:WP_002209313.1;Name=WP_002209313.1;gbkey=CDS;product=integrase;protein_id=WP_002209313.1;transl_table=11 NC_008149.1 RefSeq gene 765615 767525 . + . ID=gene705;Name=YPN_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03530;old_locus_tag=YPN_0652 NC_008149.1 Protein Homology CDS 765615 767525 . + 0 ID=cds673;Parent=gene705;Dbxref=Genbank:WP_002209314.1;Name=WP_002209314.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209314.1;transl_table=11 NC_008149.1 RefSeq gene 767518 768627 . + . ID=gene706;Name=YPN_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03535;old_locus_tag=YPN_0653 NC_008149.1 Protein Homology CDS 767518 768627 . + 0 ID=cds674;Parent=gene706;Dbxref=Genbank:WP_002209315.1;Name=WP_002209315.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209315.1;transl_table=11 NC_008149.1 RefSeq repeat_region 768611 771158 . + . ID=id81;gbkey=repeat_region NC_008149.1 RefSeq gene 768678 769457 . - . ID=gene707;Name=YPN_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03540;old_locus_tag=YPN_0654 NC_008149.1 Protein Homology CDS 768678 769457 . - 0 ID=cds675;Parent=gene707;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 769457 770479 . - . ID=gene708;Name=YPN_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03545;old_locus_tag=YPN_0655 NC_008149.1 Protein Homology CDS 769457 770479 . - 0 ID=cds676;Parent=gene708;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 770536 771048 . + . ID=gene709;Name=YPN_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03550;old_locus_tag=YPN_0656 NC_008149.1 Protein Homology CDS 770536 771048 . + 0 ID=cds677;Parent=gene709;Dbxref=Genbank:WP_002209316.1;Name=WP_002209316.1;gbkey=CDS;product=transposase;protein_id=WP_002209316.1;transl_table=11 NC_008149.1 RefSeq gene 771238 771444 . - . ID=gene710;Name=YPN_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03555;old_locus_tag=YPN_0657 NC_008149.1 Protein Homology CDS 771238 771444 . - 0 ID=cds678;Parent=gene710;Dbxref=Genbank:WP_002209317.1;Name=WP_002209317.1;Note=inhibits supercoiling by DNA gyrase by binding to the GyrB subunit;gbkey=CDS;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11 NC_008149.1 RefSeq gene 771630 772382 . - . ID=gene711;Name=YPN_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03560;old_locus_tag=YPN_0658 NC_008149.1 Protein Homology CDS 771630 772382 . - 0 ID=cds679;Parent=gene711;Dbxref=Genbank:WP_002209318.1;Name=WP_002209318.1;gbkey=CDS;product=cell division protein ZapD;protein_id=WP_002209318.1;transl_table=11 NC_008149.1 RefSeq gene 772379 772999 . - . ID=gene712;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=YPN_RS03565;old_locus_tag=YPN_0659 NC_008149.1 Protein Homology CDS 772379 772999 . - 0 ID=cds680;Parent=gene712;Dbxref=Genbank:WP_002209319.1;Name=WP_002209319.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_002209319.1;transl_table=11 NC_008149.1 RefSeq gene 773009 773209 . - . ID=gene713;Name=YPN_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03570 NC_008149.1 Protein Homology CDS 773009 773209 . - 0 ID=cds681;Parent=gene713;Dbxref=Genbank:WP_002354912.1;Name=WP_002354912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354912.1;transl_table=11 NC_008149.1 RefSeq gene 773295 774338 . + . ID=gene714;Name=YPN_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03575;old_locus_tag=YPN_0660 NC_008149.1 Protein Homology CDS 773295 774338 . + 0 ID=cds682;Parent=gene714;Dbxref=Genbank:WP_002209320.1;Name=WP_002209320.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11 NC_008149.1 RefSeq gene 774765 775964 . - . ID=gene715;Name=YPN_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03580;old_locus_tag=YPN_0661 NC_008149.1 Protein Homology CDS 774765 775964 . - 0 ID=cds683;Parent=gene715;Dbxref=Genbank:WP_002209321.1;Name=WP_002209321.1;gbkey=CDS;product=type II secretion protein F;protein_id=WP_002209321.1;transl_table=11 NC_008149.1 RefSeq gene 775961 777499 . - . ID=gene716;Name=YPN_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03585;old_locus_tag=YPN_0662 NC_008149.1 Protein Homology CDS 775961 777499 . - 0 ID=cds684;Parent=gene716;Dbxref=Genbank:WP_002228310.1;Name=WP_002228310.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_002228310.1;transl_table=11 NC_008149.1 RefSeq gene 777492 777956 . - . ID=gene717;Name=YPN_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03590;old_locus_tag=YPN_0663 NC_008149.1 Protein Homology CDS 777492 777956 . - 0 ID=cds685;Parent=gene717;Dbxref=Genbank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;product=major pilin subunit;protein_id=WP_002209323.1;transl_table=11 NC_008149.1 RefSeq gene 778159 779067 . - . ID=gene718;Name=YPN_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03595;old_locus_tag=YPN_0664 NC_008149.1 Protein Homology CDS 778159 779067 . - 0 ID=cds686;Parent=gene718;Dbxref=Genbank:WP_002209324.1;Name=WP_002209324.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_002209324.1;transl_table=11 NC_008149.1 RefSeq gene 779180 779731 . + . ID=gene719;Name=YPN_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03600;old_locus_tag=YPN_0665 NC_008149.1 Protein Homology CDS 779180 779731 . + 0 ID=cds687;Parent=gene719;Dbxref=Genbank:WP_002209325.1;Name=WP_002209325.1;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=WP_002209325.1;transl_table=11 NC_008149.1 RefSeq gene 780021 780875 . + . ID=gene720;Name=YPN_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03605;old_locus_tag=YPN_0666 NC_008149.1 Protein Homology CDS 780021 780875 . + 0 ID=cds688;Parent=gene720;Dbxref=Genbank:WP_002209326.1;Name=WP_002209326.1;Note=involved in regulation of beta-lactamase%3B putative signaling protein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209326.1;transl_table=11 NC_008149.1 RefSeq gene 781308 782705 . - . ID=gene721;Name=YPN_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03610;old_locus_tag=YPN_0667 NC_008149.1 Protein Homology CDS 781308 782705 . - 0 ID=cds689;Parent=gene721;Dbxref=Genbank:WP_002209327.1;Name=WP_002209327.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002209327.1;transl_table=11 NC_008149.1 RefSeq gene 783568 784332 . + . ID=gene722;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=YPN_RS03615;old_locus_tag=YPN_0668 NC_008149.1 Protein Homology CDS 783568 784332 . + 0 ID=cds690;Parent=gene722;Dbxref=Genbank:WP_002216080.1;Name=WP_002216080.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator;protein_id=WP_002216080.1;transl_table=11 NC_008149.1 RefSeq gene 784528 787191 . + . ID=gene723;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=YPN_RS03620;old_locus_tag=YPN_0669 NC_008149.1 Protein Homology CDS 784528 787191 . + 0 ID=cds691;Parent=gene723;Dbxref=Genbank:WP_002209329.1;Name=WP_002209329.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_002209329.1;transl_table=11 NC_008149.1 RefSeq gene 787205 788734 . + . ID=gene724;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=YPN_RS03625;old_locus_tag=YPN_0670 NC_008149.1 Protein Homology CDS 787205 788734 . + 0 ID=cds692;Parent=gene724;Dbxref=Genbank:WP_002209330.1;Name=WP_002209330.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=WP_002209330.1;transl_table=11 NC_008149.1 RefSeq gene 789040 790464 . + . ID=gene725;Name=YPN_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03630;old_locus_tag=YPN_0671 NC_008149.1 Protein Homology CDS 789040 790464 . + 0 ID=cds693;Parent=gene725;Dbxref=Genbank:WP_002209332.1;Name=WP_002209332.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_002209332.1;transl_table=11 NC_008149.1 RefSeq repeat_region 790555 791277 . + . ID=id82;gbkey=repeat_region NC_008149.1 RefSeq gene 790562 790717 . + . ID=gene726;Name=YPN_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03635 NC_008149.1 Protein Homology CDS 790562 790717 . + 0 ID=cds694;Parent=gene726;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 790707 791165 . + . ID=gene727;Name=YPN_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03640;old_locus_tag=YPN_0672 NC_008149.1 Protein Homology CDS 790707 791165 . + 0 ID=cds695;Parent=gene727;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 791735 794332 . + . ID=gene728;Name=YPN_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03645;old_locus_tag=YPN_0673 NC_008149.1 Protein Homology CDS 791735 794332 . + 0 ID=cds696;Parent=gene728;Dbxref=Genbank:WP_002209333.1;Name=WP_002209333.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11 NC_008149.1 RefSeq gene 794631 794990 . + . ID=gene729;Name=YPN_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03650;old_locus_tag=YPN_0674 NC_008149.1 Protein Homology CDS 794631 794990 . + 0 ID=cds697;Parent=gene729;Dbxref=Genbank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209334.1;transl_table=11 NC_008149.1 RefSeq gene 795101 796009 . - . ID=gene730;Name=YPN_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03655;old_locus_tag=YPN_0675 NC_008149.1 Protein Homology CDS 795101 796009 . - 0 ID=cds698;Parent=gene730;Dbxref=Genbank:WP_002209335.1;Name=WP_002209335.1;gbkey=CDS;product=aromatic amino acid exporter;protein_id=WP_002209335.1;transl_table=11 NC_008149.1 RefSeq gene 796447 797241 . - . ID=gene731;Name=YPN_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03660;old_locus_tag=YPN_0676 NC_008149.1 Protein Homology CDS 796447 797241 . - 0 ID=cds699;Parent=gene731;Dbxref=Genbank:WP_002209337.1;Name=WP_002209337.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=WP_002209337.1;transl_table=11 NC_008149.1 RefSeq gene 797319 798209 . - . ID=gene732;Name=YPN_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03665;old_locus_tag=YPN_0677 NC_008149.1 Protein Homology CDS 797319 798209 . - 0 ID=cds700;Parent=gene732;Dbxref=Genbank:WP_002209338.1;Name=WP_002209338.1;gbkey=CDS;product=polyamine aminopropyltransferase;protein_id=WP_002209338.1;transl_table=11 NC_008149.1 RefSeq gene 798326 798673 . - . ID=gene733;Name=YPN_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03670;old_locus_tag=YPN_0678 NC_008149.1 Protein Homology CDS 798326 798673 . - 0 ID=cds701;Parent=gene733;Dbxref=Genbank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228215.1;transl_table=11 NC_008149.1 RefSeq gene 798990 800591 . + . ID=gene734;Name=YPN_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03675;old_locus_tag=YPN_0679 NC_008149.1 Protein Homology CDS 798990 800591 . + 0 ID=cds702;Parent=gene734;Dbxref=Genbank:WP_002209340.1;Name=WP_002209340.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;product=blue copper oxidase CueO;protein_id=WP_002209340.1;transl_table=11 NC_008149.1 RefSeq gene 800811 801347 . + . ID=gene735;Name=YPN_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03680;old_locus_tag=YPN_0680 NC_008149.1 Protein Homology CDS 800811 801347 . + 0 ID=cds703;Parent=gene735;Dbxref=Genbank:WP_002228315.1;Name=WP_002228315.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_002228315.1;transl_table=11 NC_008149.1 RefSeq gene 801501 802163 . - . ID=gene736;Name=YPN_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03685;old_locus_tag=YPN_0681 NC_008149.1 Protein Homology CDS 801501 802163 . - 0 ID=cds704;Parent=gene736;Dbxref=Genbank:WP_002209342.1;Name=WP_002209342.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002209342.1;transl_table=11 NC_008149.1 RefSeq gene 802399 803325 . + . ID=gene737;Name=YPN_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03690;old_locus_tag=YPN_0682 NC_008149.1 Protein Homology CDS 802399 803325 . + 0 ID=cds705;Parent=gene737;Dbxref=Genbank:WP_002209343.1;Name=WP_002209343.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209343.1;transl_table=11 NC_008149.1 RefSeq gene 803322 804092 . + . ID=gene738;Name=YPN_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03695;old_locus_tag=YPN_0683 NC_008149.1 Protein Homology CDS 803322 804092 . + 0 ID=cds706;Parent=gene738;Dbxref=Genbank:WP_002209344.1;Name=WP_002209344.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209344.1;transl_table=11 NC_008149.1 RefSeq gene 804299 805613 . + . ID=gene739;Name=YPN_RS03700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS03700;old_locus_tag=YPN_0685;pseudo=true NC_008149.1 Protein Homology CDS 804299 805613 . + 0 ID=cds707;Parent=gene739;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 805762 806142 . - . ID=gene740;Name=YPN_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03705;old_locus_tag=YPN_0686 NC_008149.1 Protein Homology CDS 805762 806142 . - 0 ID=cds708;Parent=gene740;Dbxref=Genbank:WP_002209347.1;Name=WP_002209347.1;gbkey=CDS;product=aspartate 1-decarboxylase;protein_id=WP_002209347.1;transl_table=11 NC_008149.1 RefSeq gene 806553 807407 . - . ID=gene741;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=YPN_RS03710;old_locus_tag=YPN_0687 NC_008149.1 Protein Homology CDS 806553 807407 . - 0 ID=cds709;Parent=gene741;Dbxref=Genbank:WP_002209348.1;Name=WP_002209348.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantothenate synthetase;protein_id=WP_002209348.1;transl_table=11 NC_008149.1 RefSeq gene 807495 808292 . - . ID=gene742;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=YPN_RS03715;old_locus_tag=YPN_0688 NC_008149.1 Protein Homology CDS 807495 808292 . - 0 ID=cds710;Parent=gene742;Dbxref=Genbank:WP_002209349.1;Name=WP_002209349.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_002209349.1;transl_table=11 NC_008149.1 RefSeq gene 808561 809040 . - . ID=gene743;Name=YPN_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03720;old_locus_tag=YPN_0689 NC_008149.1 Protein Homology CDS 808561 809040 . - 0 ID=cds711;Parent=gene743;Dbxref=Genbank:WP_002209351.1;Name=WP_002209351.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_002209351.1;transl_table=11 NC_008149.1 RefSeq gene 809048 810469 . - . ID=gene744;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=YPN_RS03725;old_locus_tag=YPN_0690 NC_008149.1 Protein Homology CDS 809048 810469 . - 0 ID=cds712;Parent=gene744;Dbxref=Genbank:WP_032465644.1;Name=WP_032465644.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_032465644.1;transl_table=11 NC_008149.1 RefSeq gene 810612 811577 . - . ID=gene745;Name=YPN_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03730;old_locus_tag=YPN_0691 NC_008149.1 Protein Homology CDS 810612 811577 . - 0 ID=cds713;Parent=gene745;Dbxref=Genbank:WP_002228220.1;Name=WP_002228220.1;gbkey=CDS;product=glutamyl-Q tRNA(Asp) ligase;protein_id=WP_002228220.1;transl_table=11 NC_008149.1 RefSeq gene 811857 812312 . - . ID=gene746;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=YPN_RS03735;old_locus_tag=YPN_0693 NC_008149.1 Protein Homology CDS 811857 812312 . - 0 ID=cds714;Parent=gene746;Dbxref=Genbank:WP_002209354.1;Name=WP_002209354.1;gbkey=CDS;gene=dksA;product=transcriptional regulator;protein_id=WP_002209354.1;transl_table=11 NC_008149.1 RefSeq gene 812482 813219 . - . ID=gene747;Name=YPN_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03740;old_locus_tag=YPN_0694 NC_008149.1 Protein Homology CDS 812482 813219 . - 0 ID=cds715;Parent=gene747;Dbxref=Genbank:WP_002228221.1;Name=WP_002228221.1;gbkey=CDS;product=sugar fermentation stimulation protein homolog;protein_id=WP_002228221.1;transl_table=11 NC_008149.1 RefSeq gene 813332 813907 . - . ID=gene748;Name=YPN_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03745;old_locus_tag=YPN_0695 NC_008149.1 Protein Homology CDS 813332 813907 . - 0 ID=cds716;Parent=gene748;Dbxref=Genbank:WP_002209356.1;Name=WP_002209356.1;gbkey=CDS;product=2'-5' RNA ligase;protein_id=WP_002209356.1;transl_table=11 NC_008149.1 RefSeq gene 813948 816509 . + . ID=gene749;Name=YPN_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03750;old_locus_tag=YPN_0696 NC_008149.1 Protein Homology CDS 813948 816509 . + 0 ID=cds717;Parent=gene749;Dbxref=Genbank:WP_002222096.1;Name=WP_002222096.1;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;gbkey=CDS;product=RNA helicase;protein_id=WP_002222096.1;transl_table=11 NC_008149.1 RefSeq gene 816618 819092 . + . ID=gene750;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=YPN_RS03755;old_locus_tag=YPN_0697 NC_008149.1 Protein Homology CDS 816618 819092 . + 0 ID=cds718;Parent=gene750;Dbxref=Genbank:WP_002209358.1;Name=WP_002209358.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_002209358.1;transl_table=11 NC_008149.1 RefSeq gene 819414 820208 . + . ID=gene751;Name=YPN_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03760;old_locus_tag=YPN_0698 NC_008149.1 Protein Homology CDS 819414 820208 . + 0 ID=cds719;Parent=gene751;Dbxref=Genbank:WP_002209359.1;Name=WP_002209359.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding protein;protein_id=WP_002209359.1;transl_table=11 NC_008149.1 RefSeq gene 820385 821296 . + . ID=gene752;Name=YPN_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03765;old_locus_tag=YPN_0699 NC_008149.1 Protein Homology CDS 820385 821296 . + 0 ID=cds720;Parent=gene752;Dbxref=Genbank:WP_002209360.1;Name=WP_002209360.1;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=WP_002209360.1;transl_table=11 NC_008149.1 RefSeq gene 821293 823290 . + . ID=gene753;Name=YPN_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03770;old_locus_tag=YPN_0700 NC_008149.1 Protein Homology CDS 821293 823290 . + 0 ID=cds721;Parent=gene753;Dbxref=Genbank:WP_002209361.1;Name=WP_002209361.1;gbkey=CDS;product=iron-hydroxamate transporter permease subunit;protein_id=WP_002209361.1;transl_table=11 NC_008149.1 RefSeq gene 823664 824944 . - . ID=gene754;Name=YPN_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03775;old_locus_tag=YPN_0701 NC_008149.1 Protein Homology CDS 823664 824944 . - 0 ID=cds722;Parent=gene754;Dbxref=Genbank:WP_002209362.1;Name=WP_002209362.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002209362.1;transl_table=11 NC_008149.1 RefSeq gene 825325 826761 . + . ID=gene755;Name=YPN_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03780;old_locus_tag=YPN_0702 NC_008149.1 Protein Homology CDS 825325 826761 . + 0 ID=cds723;Parent=gene755;Dbxref=Genbank:WP_002209364.1;Name=WP_002209364.1;gbkey=CDS;product=H+/Cl- exchange transporter ClcA;protein_id=WP_002209364.1;transl_table=11 NC_008149.1 RefSeq gene 826897 827241 . + . ID=gene756;Name=YPN_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03785;old_locus_tag=YPN_0703 NC_008149.1 Protein Homology CDS 826897 827241 . + 0 ID=cds724;Parent=gene756;Dbxref=Genbank:WP_002209365.1;Name=WP_002209365.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11 NC_008149.1 RefSeq gene 827543 828157 . - . ID=gene757;Name=YPN_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03790;old_locus_tag=YPN_0705 NC_008149.1 Protein Homology CDS 827543 828157 . - 0 ID=cds725;Parent=gene757;Dbxref=Genbank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209366.1;transl_table=11 NC_008149.1 RefSeq gene 828157 828999 . - . ID=gene758;Name=YPN_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03795;old_locus_tag=YPN_0706 NC_008149.1 Protein Homology CDS 828157 828999 . - 0 ID=cds726;Parent=gene758;Dbxref=Genbank:WP_002222100.1;Name=WP_002222100.1;gbkey=CDS;product=vitamin B12-binding protein;protein_id=WP_002222100.1;transl_table=11 NC_008149.1 RefSeq gene 828999 829700 . - . ID=gene759;Name=YPN_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03800;old_locus_tag=YPN_0707 NC_008149.1 Protein Homology CDS 828999 829700 . - 0 ID=cds727;Parent=gene759;Dbxref=Genbank:WP_002209368.1;Name=WP_002209368.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_002209368.1;transl_table=11 NC_008149.1 RefSeq gene 829994 831514 . + . ID=gene760;Name=YPN_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03805;old_locus_tag=YPN_0708 NC_008149.1 Protein Homology CDS 829994 831514 . + 0 ID=cds728;Parent=gene760;Dbxref=Genbank:WP_002209369.1;Name=WP_002209369.1;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_002209369.1;transl_table=11 NC_008149.1 RefSeq gene 831712 833157 . + . ID=gene761;Name=YPN_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03810;old_locus_tag=YPN_0709 NC_008149.1 Protein Homology CDS 831712 833157 . + 0 ID=cds729;Parent=gene761;Dbxref=Genbank:WP_002209370.1;Name=WP_002209370.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;product=serine endoprotease;protein_id=WP_002209370.1;transl_table=11 NC_008149.1 RefSeq gene 833332 836133 . - . ID=gene762;Name=YPN_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03815;old_locus_tag=YPN_0710 NC_008149.1 Protein Homology CDS 833332 836133 . - 0 ID=cds730;Parent=gene762;Dbxref=Genbank:WP_002228321.1;Name=WP_002228321.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002228321.1;transl_table=11 NC_008149.1 RefSeq gene 836577 838811 . + . ID=gene763;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=YPN_RS03820;old_locus_tag=YPN_0713 NC_008149.1 Protein Homology CDS 836577 838811 . + 0 ID=cds731;Parent=gene763;Dbxref=Genbank:WP_002209373.1;Name=WP_002209373.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=WP_002209373.1;transl_table=11 NC_008149.1 RefSeq gene 838848 839006 . + . ID=gene764;Name=YPN_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03825 NC_008149.1 Protein Homology CDS 838848 839006 . + 0 ID=cds732;Parent=gene764;Dbxref=Genbank:WP_002228225.1;Name=WP_002228225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228225.1;transl_table=11 NC_008149.1 RefSeq gene 839013 839855 . + . ID=gene765;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=YPN_RS03830;old_locus_tag=YPN_0714 NC_008149.1 Protein Homology CDS 839013 839855 . + 0 ID=cds733;Parent=gene765;Dbxref=Genbank:WP_002209374.1;Name=WP_002209374.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002209374.1;transl_table=11 NC_008149.1 RefSeq gene 840067 841704 . + . ID=gene766;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=YPN_RS03835;old_locus_tag=YPN_0715 NC_008149.1 Protein Homology CDS 840067 841704 . + 0 ID=cds734;Parent=gene766;Dbxref=Genbank:WP_002209376.1;Name=WP_002209376.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=WP_002209376.1;transl_table=11 NC_008149.1 RefSeq gene 841785 843080 . + . ID=gene767;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=YPN_RS03840;old_locus_tag=YPN_0716 NC_008149.1 Protein Homology CDS 841785 843080 . + 0 ID=cds735;Parent=gene767;Dbxref=Genbank:WP_002209377.1;Name=WP_002209377.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_002209377.1;transl_table=11 NC_008149.1 RefSeq gene 843452 844057 . + . ID=gene768;Name=YPN_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03845;old_locus_tag=YPN_0717 NC_008149.1 Protein Homology CDS 843452 844057 . + 0 ID=cds736;Parent=gene768;Dbxref=Genbank:WP_002218050.1;Name=WP_002218050.1;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002218050.1;transl_table=11 NC_008149.1 RefSeq gene 844161 844832 . + . ID=gene769;Name=YPN_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03850;old_locus_tag=YPN_0718 NC_008149.1 Protein Homology CDS 844161 844832 . + 0 ID=cds737;Parent=gene769;Dbxref=Genbank:WP_002209379.1;Name=WP_002209379.1;gbkey=CDS;product=7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=WP_002209379.1;transl_table=11 NC_008149.1 RefSeq gene 845066 845425 . - . ID=gene770;Name=YPN_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03855;old_locus_tag=YPN_0719 NC_008149.1 Protein Homology CDS 845066 845425 . - 0 ID=cds738;Parent=gene770;Dbxref=Genbank:WP_002209380.1;Name=WP_002209380.1;gbkey=CDS;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=WP_002209380.1;transl_table=11 NC_008149.1 RefSeq gene 845818 847656 . + . ID=gene771;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=YPN_RS03860;old_locus_tag=YPN_0720 NC_008149.1 Protein Homology CDS 845818 847656 . + 0 ID=cds739;Parent=gene771;Dbxref=Genbank:WP_002223202.1;Name=WP_002223202.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=WP_002223202.1;transl_table=11 NC_008149.1 RefSeq gene 847656 849386 . + . ID=gene772;Name=YPN_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03865;old_locus_tag=YPN_0721 NC_008149.1 Protein Homology CDS 847656 849386 . + 0 ID=cds740;Parent=gene772;Dbxref=Genbank:WP_002209382.1;Name=WP_002209382.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=WP_002209382.1;transl_table=11 NC_008149.1 RefSeq gene 849383 850109 . + . ID=gene773;Name=YPN_RS03870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS03870;pseudo=true NC_008149.1 Protein Homology CDS 849383 850109 . + 0 ID=cds741;Parent=gene773;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;pseudo=true;transl_table=11 NC_008149.1 RefSeq repeat_region 850145 850324 . + . ID=id83;gbkey=repeat_region NC_008149.1 RefSeq gene 850352 850759 . - . ID=gene774;Name=YPN_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03875;old_locus_tag=YPN_0724 NC_008149.1 Protein Homology CDS 850352 850759 . - 0 ID=cds742;Parent=gene774;Dbxref=Genbank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209383.1;transl_table=11 NC_008149.1 RefSeq gene 850934 851134 . - . ID=gene775;Name=YPN_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03880;old_locus_tag=YPN_0725 NC_008149.1 Protein Homology CDS 850934 851134 . - 0 ID=cds743;Parent=gene775;Dbxref=Genbank:WP_002209384.1;Name=WP_002209384.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209384.1;transl_table=11 NC_008149.1 RefSeq gene 851227 851424 . + . ID=gene776;Name=YPN_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03885 NC_008149.1 Protein Homology CDS 851227 851424 . + 0 ID=cds744;Parent=gene776;Dbxref=Genbank:WP_002222261.1;Name=WP_002222261.1;gbkey=CDS;product=membrane protein;protein_id=WP_002222261.1;transl_table=11 NC_008149.1 RefSeq gene 851725 853143 . + . ID=gene777;Name=YPN_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03890;old_locus_tag=YPN_0726 NC_008149.1 Protein Homology CDS 851725 853143 . + 0 ID=cds745;Parent=gene777;Dbxref=Genbank:WP_002209385.1;Name=WP_002209385.1;gbkey=CDS;product=sirohydrochlorin ferrochelatase;protein_id=WP_002209385.1;transl_table=11 NC_008149.1 RefSeq gene 853154 854062 . + . ID=gene778;Name=YPN_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03895;old_locus_tag=YPN_0727 NC_008149.1 Protein Homology CDS 853154 854062 . + 0 ID=cds746;Parent=gene778;Dbxref=Genbank:WP_002209386.1;Name=WP_002209386.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=WP_002209386.1;transl_table=11 NC_008149.1 RefSeq gene 854155 855591 . + . ID=gene779;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=YPN_RS03900;old_locus_tag=YPN_0728 NC_008149.1 Protein Homology CDS 854155 855591 . + 0 ID=cds747;Parent=gene779;Dbxref=Genbank:WP_002228227.1;Name=WP_002228227.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=WP_002228227.1;transl_table=11 NC_008149.1 RefSeq gene 855593 856234 . + . ID=gene780;Name=YPN_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03905;old_locus_tag=YPN_0729 NC_008149.1 Protein Homology CDS 855593 856234 . + 0 ID=cds748;Parent=gene780;Dbxref=Genbank:WP_002209388.1;Name=WP_002209388.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;product=adenylyl-sulfate kinase;protein_id=WP_002209388.1;transl_table=11 NC_008149.1 RefSeq gene 856425 856742 . + . ID=gene781;Name=YPN_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03910;old_locus_tag=YPN_0730 NC_008149.1 Protein Homology CDS 856425 856742 . + 0 ID=cds749;Parent=gene781;Dbxref=Genbank:WP_002209389.1;Name=WP_002209389.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209389.1;transl_table=11 NC_008149.1 RefSeq gene 857056 857376 . + . ID=gene782;Name=YPN_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03915;old_locus_tag=YPN_0731 NC_008149.1 Protein Homology CDS 857056 857376 . + 0 ID=cds750;Parent=gene782;Dbxref=Genbank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11 NC_008149.1 RefSeq gene 857380 858105 . + . ID=gene783;Name=YPN_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03920;old_locus_tag=YPN_0732 NC_008149.1 Protein Homology CDS 857380 858105 . + 0 ID=cds751;Parent=gene783;Dbxref=Genbank:WP_002209391.1;Name=WP_002209391.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_002209391.1;transl_table=11 NC_008149.1 RefSeq gene 858244 858732 . + . ID=gene784;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=YPN_RS03925;old_locus_tag=YPN_0733 NC_008149.1 Protein Homology CDS 858244 858732 . + 0 ID=cds752;Parent=gene784;Dbxref=Genbank:WP_002209392.1;Name=WP_002209392.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002209392.1;transl_table=11 NC_008149.1 RefSeq gene 858743 859792 . + . ID=gene785;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=YPN_RS03930;old_locus_tag=YPN_0734 NC_008149.1 Protein Homology CDS 858743 859792 . + 0 ID=cds753;Parent=gene785;Dbxref=Genbank:WP_002209393.1;Name=WP_002209393.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=WP_002209393.1;transl_table=11 NC_008149.1 RefSeq gene 859770 860534 . + . ID=gene786;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=YPN_RS03935;old_locus_tag=YPN_0735 NC_008149.1 Protein Homology CDS 859770 860534 . + 0 ID=cds754;Parent=gene786;Dbxref=Genbank:WP_002209394.1;Name=WP_002209394.1;Note=broad specificity 5'(3')-nucleotidase and polyphosphatase;gbkey=CDS;gene=surE;product=5'/3'-nucleotidase SurE;protein_id=WP_002209394.1;transl_table=11 NC_008149.1 RefSeq gene 860528 861154 . + . ID=gene787;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=YPN_RS03940;old_locus_tag=YPN_0736 NC_008149.1 Protein Homology CDS 860528 861154 . + 0 ID=cds755;Parent=gene787;Dbxref=Genbank:WP_002209395.1;Name=WP_002209395.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_002209395.1;transl_table=11 NC_008149.1 RefSeq gene 861276 862259 . + . ID=gene788;Name=YPN_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03945;old_locus_tag=YPN_0737 NC_008149.1 Protein Homology CDS 861276 862259 . + 0 ID=cds756;Parent=gene788;Dbxref=Genbank:WP_002209396.1;Name=WP_002209396.1;gbkey=CDS;product=lipoprotein nlpD;protein_id=WP_002209396.1;transl_table=11 NC_008149.1 RefSeq gene 862314 863312 . + . ID=gene789;Name=YPN_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03950;old_locus_tag=YPN_0738 NC_008149.1 Protein Homology CDS 862314 863312 . + 0 ID=cds757;Parent=gene789;Dbxref=Genbank:WP_002209397.1;Name=WP_002209397.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=WP_002209397.1;transl_table=11 NC_008149.1 RefSeq gene 863664 866219 . - . ID=gene790;Name=YPN_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03955;old_locus_tag=YPN_0739 NC_008149.1 Protein Homology CDS 863664 866219 . - 0 ID=cds758;Parent=gene790;Dbxref=Genbank:WP_002209399.1;Name=WP_002209399.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_002209399.1;transl_table=11 NC_008149.1 RefSeq gene 866716 866850 . + . ID=gene791;Name=YPN_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03960;old_locus_tag=YPN_0740 NC_008149.1 Protein Homology CDS 866716 866850 . + 0 ID=cds759;Parent=gene791;Dbxref=Genbank:WP_002216243.1;Name=WP_002216243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216243.1;transl_table=11 NC_008149.1 RefSeq gene 867013 867468 . - . ID=gene792;Name=YPN_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03965;old_locus_tag=YPN_0741 NC_008149.1 Protein Homology CDS 867013 867468 . - 0 ID=cds760;Parent=gene792;Dbxref=Genbank:WP_002209402.1;Name=WP_002209402.1;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_002209402.1;transl_table=11 NC_008149.1 RefSeq gene 867951 869066 . + . ID=gene793;Name=YPN_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03970;old_locus_tag=YPN_0742 NC_008149.1 Protein Homology CDS 867951 869066 . + 0 ID=cds761;Parent=gene793;Dbxref=Genbank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002209403.1;transl_table=11 NC_008149.1 RefSeq gene 869130 869900 . + . ID=gene794;Name=YPN_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03975;old_locus_tag=YPN_0743 NC_008149.1 Protein Homology CDS 869130 869900 . + 0 ID=cds762;Parent=gene794;Dbxref=Genbank:WP_002209404.1;Name=WP_002209404.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002209404.1;transl_table=11 NC_008149.1 RefSeq gene 869987 870988 . + . ID=gene795;Name=YPN_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03980;old_locus_tag=YPN_0744 NC_008149.1 Protein Homology CDS 869987 870988 . + 0 ID=cds763;Parent=gene795;Dbxref=Genbank:WP_002228229.1;Name=WP_002228229.1;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002228229.1;transl_table=11 NC_008149.1 RefSeq gene 870995 871669 . + . ID=gene796;Name=YPN_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03985;old_locus_tag=YPN_0745 NC_008149.1 Protein Homology CDS 870995 871669 . + 0 ID=cds764;Parent=gene796;Dbxref=Genbank:WP_002209406.1;Name=WP_002209406.1;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=WP_002209406.1;transl_table=11 NC_008149.1 RefSeq gene 871790 872761 . - . ID=gene797;Name=YPN_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03990;old_locus_tag=YPN_0746 NC_008149.1 Protein Homology CDS 871790 872761 . - 0 ID=cds765;Parent=gene797;Dbxref=Genbank:WP_002209407.1;Name=WP_002209407.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209407.1;transl_table=11 NC_008149.1 RefSeq gene 873316 874605 . - . ID=gene798;Name=YPN_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS03995;old_locus_tag=YPN_0747 NC_008149.1 Protein Homology CDS 873316 874605 . - 0 ID=cds766;Parent=gene798;Dbxref=Genbank:WP_002209408.1;Name=WP_002209408.1;gbkey=CDS;product=arylsulfatase;protein_id=WP_002209408.1;transl_table=11 NC_008149.1 RefSeq gene 874690 875031 . - . ID=gene799;Name=YPN_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04000;old_locus_tag=YPN_0748 NC_008149.1 Protein Homology CDS 874690 875031 . - 0 ID=cds767;Parent=gene799;Dbxref=Genbank:WP_002209409.1;Name=WP_002209409.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=WP_002209409.1;transl_table=11 NC_008149.1 RefSeq gene 875278 875541 . - . ID=gene800;Name=YPN_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04005 NC_008149.1 Protein Homology CDS 875278 875541 . - 0 ID=cds768;Parent=gene800;Dbxref=Genbank:WP_002217994.1;Name=WP_002217994.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217994.1;transl_table=11 NC_008149.1 RefSeq gene 875752 875955 . - . ID=gene801;Name=YPN_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04010;old_locus_tag=YPN_0749 NC_008149.1 Protein Homology CDS 875752 875955 . - 0 ID=cds769;Parent=gene801;Dbxref=Genbank:WP_002209410.1;Name=WP_002209410.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209410.1;transl_table=11 NC_008149.1 RefSeq gene 876379 877143 . - . ID=gene802;Name=YPN_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04015;old_locus_tag=YPN_0750 NC_008149.1 Protein Homology CDS 876379 877143 . - 0 ID=cds770;Parent=gene802;Dbxref=Genbank:WP_002209411.1;Name=WP_002209411.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002209411.1;transl_table=11 NC_008149.1 RefSeq gene 877214 878593 . - . ID=gene803;Name=YPN_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04020;old_locus_tag=YPN_0751 NC_008149.1 Protein Homology CDS 877214 878593 . - 0 ID=cds771;Parent=gene803;Dbxref=Genbank:WP_002209412.1;Name=WP_002209412.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209412.1;transl_table=11 NC_008149.1 RefSeq gene 878830 879081 . - . ID=gene804;Name=YPN_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04025;old_locus_tag=YPN_0752 NC_008149.1 Protein Homology CDS 878830 879081 . - 0 ID=cds772;Parent=gene804;Dbxref=Genbank:WP_002223220.1;Name=WP_002223220.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223220.1;transl_table=11 NC_008149.1 RefSeq gene 879254 881350 . + . ID=gene805;Name=YPN_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04030;old_locus_tag=YPN_0753 NC_008149.1 Protein Homology CDS 879254 881350 . + 0 ID=cds773;Parent=gene805;Dbxref=Genbank:WP_002223222.1;Name=WP_002223222.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002223222.1;transl_table=11 NC_008149.1 RefSeq gene 881783 882970 . + . ID=gene806;Name=YPN_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04035;old_locus_tag=YPN_0754 NC_008149.1 Protein Homology CDS 881783 882970 . + 0 ID=cds774;Parent=gene806;Dbxref=Genbank:WP_002209414.1;Name=WP_002209414.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002209414.1;transl_table=11 NC_008149.1 RefSeq gene 883133 883318 . + . ID=gene807;Name=YPN_RS04040;gbkey=Gene;gene_biotype=other;locus_tag=YPN_RS04040;old_locus_tag=YPN_0755 NC_008149.1 RefSeq gene 883328 884113 . - . ID=gene808;Name=YPN_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04045;old_locus_tag=YPN_0756 NC_008149.1 Protein Homology CDS 883328 884113 . - 0 ID=cds775;Parent=gene808;Dbxref=Genbank:WP_002209416.1;Name=WP_002209416.1;gbkey=CDS;product=methionine aminopeptidase type I;protein_id=WP_002209416.1;transl_table=11 NC_008149.1 RefSeq gene 884110 884361 . - . ID=gene809;Name=YPN_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04050;old_locus_tag=YPN_0757 NC_008149.1 Protein Homology CDS 884110 884361 . - 0 ID=cds776;Parent=gene809;Dbxref=Genbank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209417.1;transl_table=11 NC_008149.1 RefSeq gene 884544 886187 . - . ID=gene810;Name=YPN_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04055;old_locus_tag=YPN_0758 NC_008149.1 Protein Homology CDS 884544 886187 . - 0 ID=cds777;Parent=gene810;Dbxref=Genbank:WP_002209418.1;Name=WP_002209418.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;product=fumarate hydratase;protein_id=WP_002209418.1;transl_table=11 NC_008149.1 RefSeq gene 886585 888081 . - . ID=gene811;Name=YPN_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04060;old_locus_tag=YPN_0759 NC_008149.1 Protein Homology CDS 886585 888081 . - 0 ID=cds778;Parent=gene811;Dbxref=Genbank:WP_002209419.1;Name=WP_002209419.1;gbkey=CDS;product=3-keto-L-gulonate kinase;protein_id=WP_002209419.1;transl_table=11 NC_008149.1 RefSeq gene 888092 888973 . - . ID=gene812;Name=YPN_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04065;old_locus_tag=YPN_0760 NC_008149.1 Protein Homology CDS 888092 888973 . - 0 ID=cds779;Parent=gene812;Dbxref=Genbank:WP_002209420.1;Name=WP_002209420.1;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=WP_002209420.1;transl_table=11 NC_008149.1 RefSeq gene 889179 890216 . - . ID=gene813;Name=YPN_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04070;old_locus_tag=YPN_0761 NC_008149.1 Protein Homology CDS 889179 890216 . - 0 ID=cds780;Parent=gene813;Dbxref=Genbank:WP_002216010.1;Name=WP_002216010.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002216010.1;transl_table=11 NC_008149.1 RefSeq gene 890229 891218 . - . ID=gene814;Name=YPN_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04075;old_locus_tag=YPN_0762 NC_008149.1 Protein Homology CDS 890229 891218 . - 0 ID=cds781;Parent=gene814;Dbxref=Genbank:WP_002209421.1;Name=WP_002209421.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209421.1;transl_table=11 NC_008149.1 RefSeq gene 891211 892725 . - . ID=gene815;Name=YPN_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04080;old_locus_tag=YPN_0763 NC_008149.1 Protein Homology CDS 891211 892725 . - 0 ID=cds782;Parent=gene815;Dbxref=Genbank:WP_002209422.1;Name=WP_002209422.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209422.1;transl_table=11 NC_008149.1 RefSeq repeat_region 892766 893483 . + . ID=id84;gbkey=repeat_region NC_008149.1 RefSeq gene 892876 893334 . - . ID=gene816;Name=YPN_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04085;old_locus_tag=YPN_0764 NC_008149.1 Protein Homology CDS 892876 893334 . - 0 ID=cds783;Parent=gene816;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 893585 894589 . - . ID=gene817;Name=YPN_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04090;old_locus_tag=YPN_0765 NC_008149.1 Protein Homology CDS 893585 894589 . - 0 ID=cds784;Parent=gene817;Dbxref=Genbank:WP_002216011.1;Name=WP_002216011.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002216011.1;transl_table=11 NC_008149.1 RefSeq gene 894750 895559 . - . ID=gene818;Name=YPN_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04095;old_locus_tag=YPN_0766 NC_008149.1 Protein Homology CDS 894750 895559 . - 0 ID=cds785;Parent=gene818;Dbxref=Genbank:WP_002209424.1;Name=WP_002209424.1;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209424.1;transl_table=11 NC_008149.1 RefSeq gene 896262 896957 . + . ID=gene819;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPN_RS04100;old_locus_tag=YPN_0767 NC_008149.1 Protein Homology CDS 896262 896957 . + 0 ID=cds786;Parent=gene819;Dbxref=Genbank:WP_002209426.1;Name=WP_002209426.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11 NC_008149.1 RefSeq gene 897420 899870 . + . ID=gene820;Name=YPN_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04105;old_locus_tag=YPN_0768 NC_008149.1 Protein Homology CDS 897420 899870 . + 0 ID=cds787;Parent=gene820;Dbxref=Genbank:WP_002209427.1;Name=WP_002209427.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002209427.1;transl_table=11 NC_008149.1 RefSeq gene 899882 900499 . + . ID=gene821;Name=YPN_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04110;old_locus_tag=YPN_0769 NC_008149.1 Protein Homology CDS 899882 900499 . + 0 ID=cds788;Parent=gene821;Dbxref=Genbank:WP_002209428.1;Name=WP_002209428.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209428.1;transl_table=11 NC_008149.1 RefSeq gene 900501 901361 . + . ID=gene822;Name=YPN_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04115;old_locus_tag=YPN_0770 NC_008149.1 Protein Homology CDS 900501 901361 . + 0 ID=cds789;Parent=gene822;Dbxref=Genbank:WP_002209429.1;Name=WP_002209429.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit C;protein_id=WP_002209429.1;transl_table=11 NC_008149.1 RefSeq gene 901507 902217 . + . ID=gene823;Name=YPN_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04120;old_locus_tag=YPN_0771 NC_008149.1 Protein Homology CDS 901507 902217 . + 0 ID=cds790;Parent=gene823;Dbxref=Genbank:WP_002209430.1;Name=WP_002209430.1;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=WP_002209430.1;transl_table=11 NC_008149.1 RefSeq gene 902474 903004 . - . ID=gene824;Name=YPN_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04125;old_locus_tag=YPN_0772 NC_008149.1 Protein Homology CDS 902474 903004 . - 0 ID=cds791;Parent=gene824;Dbxref=Genbank:WP_002215100.1;Name=WP_002215100.1;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;product=cytochrome b561;protein_id=WP_002215100.1;transl_table=11 NC_008149.1 RefSeq gene 903152 903535 . - . ID=gene825;Name=YPN_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04130;old_locus_tag=YPN_0773 NC_008149.1 Protein Homology CDS 903152 903535 . - 0 ID=cds792;Parent=gene825;Dbxref=Genbank:WP_002215101.1;Name=WP_002215101.1;Note=electron transport protein;gbkey=CDS;product=soluble cytochrome b562 1;protein_id=WP_002215101.1;transl_table=11 NC_008149.1 RefSeq gene 903612 905825 . - . ID=gene826;Name=YPN_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04135;old_locus_tag=YPN_0774 NC_008149.1 Protein Homology CDS 903612 905825 . - 0 ID=cds793;Parent=gene826;Dbxref=Genbank:WP_002209433.1;Name=WP_002209433.1;gbkey=CDS;product=catalase-peroxidase;protein_id=WP_002209433.1;transl_table=11 NC_008149.1 RefSeq gene 906361 907302 . + . ID=gene827;Name=YPN_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04140;old_locus_tag=YPN_0775 NC_008149.1 Protein Homology CDS 906361 907302 . + 0 ID=cds794;Parent=gene827;Dbxref=Genbank:WP_002209434.1;Name=WP_002209434.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209434.1;transl_table=11 NC_008149.1 RefSeq gene 907395 908012 . + . ID=gene828;Name=YPN_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04145;old_locus_tag=YPN_0776 NC_008149.1 Protein Homology CDS 907395 908012 . + 0 ID=cds795;Parent=gene828;Dbxref=Genbank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209435.1;transl_table=11 NC_008149.1 RefSeq gene 908012 909535 . + . ID=gene829;Name=YPN_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04150;old_locus_tag=YPN_0777 NC_008149.1 Protein Homology CDS 908012 909535 . + 0 ID=cds796;Parent=gene829;Dbxref=Genbank:WP_002209436.1;Name=WP_002209436.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209436.1;transl_table=11 NC_008149.1 RefSeq gene 909535 910677 . + . ID=gene830;Name=YPN_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04155;old_locus_tag=YPN_0778 NC_008149.1 Protein Homology CDS 909535 910677 . + 0 ID=cds797;Parent=gene830;Dbxref=Genbank:WP_002354764.1;Name=WP_002354764.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002354764.1;transl_table=11 NC_008149.1 RefSeq gene 910928 911758 . + . ID=gene831;Name=YPN_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04160;old_locus_tag=YPN_0779 NC_008149.1 Protein Homology CDS 910928 911758 . + 0 ID=cds798;Parent=gene831;Dbxref=Genbank:WP_002209438.1;Name=WP_002209438.1;gbkey=CDS;product=transketolase;protein_id=WP_002209438.1;transl_table=11 NC_008149.1 RefSeq gene 911751 912695 . + . ID=gene832;Name=YPN_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04165;old_locus_tag=YPN_0780 NC_008149.1 Protein Homology CDS 911751 912695 . + 0 ID=cds799;Parent=gene832;Dbxref=Genbank:WP_002209439.1;Name=WP_002209439.1;gbkey=CDS;product=transketolase;protein_id=WP_002209439.1;transl_table=11 NC_008149.1 RefSeq gene 912698 914185 . + . ID=gene833;Name=YPN_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04170;old_locus_tag=YPN_0781 NC_008149.1 Protein Homology CDS 912698 914185 . + 0 ID=cds800;Parent=gene833;Dbxref=Genbank:WP_002209440.1;Name=WP_002209440.1;gbkey=CDS;product=glycerol kinase;protein_id=WP_002209440.1;transl_table=11 NC_008149.1 RefSeq gene 914206 915630 . + . ID=gene834;Name=YPN_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04175;old_locus_tag=YPN_0782 NC_008149.1 Protein Homology CDS 914206 915630 . + 0 ID=cds801;Parent=gene834;Dbxref=Genbank:WP_002209441.1;Name=WP_002209441.1;gbkey=CDS;product=fucose isomerase;protein_id=WP_002209441.1;transl_table=11 NC_008149.1 RefSeq gene 915852 916796 . - . ID=gene835;Name=YPN_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04180;old_locus_tag=YPN_0784 NC_008149.1 Protein Homology CDS 915852 916796 . - 0 ID=cds802;Parent=gene835;Dbxref=Genbank:WP_002209443.1;Name=WP_002209443.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11 NC_008149.1 RefSeq gene 917044 918384 . - . ID=gene836;Name=YPN_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04185;old_locus_tag=YPN_0785 NC_008149.1 Protein Homology CDS 917044 918384 . - 0 ID=cds803;Parent=gene836;Dbxref=Genbank:WP_002209444.1;Name=WP_002209444.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209444.1;transl_table=11 NC_008149.1 RefSeq gene 918701 919189 . + . ID=gene837;Name=YPN_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04190;old_locus_tag=YPN_0786 NC_008149.1 Protein Homology CDS 918701 919189 . + 0 ID=cds804;Parent=gene837;Dbxref=Genbank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209445.1;transl_table=11 NC_008149.1 RefSeq gene 919304 920374 . + . ID=gene838;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=YPN_RS04195;old_locus_tag=YPN_0787 NC_008149.1 Protein Homology CDS 919304 920374 . + 0 ID=cds805;Parent=gene838;Dbxref=Genbank:WP_002209446.1;Name=WP_002209446.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;product=protein RecA;protein_id=WP_002209446.1;transl_table=11 NC_008149.1 RefSeq gene 920512 921075 . + . ID=gene839;Name=YPN_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04200;old_locus_tag=YPN_0788 NC_008149.1 Protein Homology CDS 920512 921075 . + 0 ID=cds806;Parent=gene839;Dbxref=Genbank:WP_002209447.1;Name=WP_002209447.1;gbkey=CDS;product=regulatory protein RecX;protein_id=WP_002209447.1;transl_table=11 NC_008149.1 RefSeq gene 921215 923842 . + . ID=gene840;Name=YPN_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04205;old_locus_tag=YPN_0789 NC_008149.1 Protein Homology CDS 921215 923842 . + 0 ID=cds807;Parent=gene840;Dbxref=Genbank:WP_002209448.1;Name=WP_002209448.1;gbkey=CDS;product=alanine--tRNA ligase;protein_id=WP_002209448.1;transl_table=11 NC_008149.1 RefSeq gene 924092 924277 . + . ID=gene841;Name=YPN_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04210;old_locus_tag=YPN_0790 NC_008149.1 Protein Homology CDS 924092 924277 . + 0 ID=cds808;Parent=gene841;Dbxref=Genbank:WP_002209449.1;Name=WP_002209449.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator homolog;protein_id=WP_002209449.1;transl_table=11 NC_008149.1 RefSeq gene 924640 924732 . + . ID=gene842;Name=YPN_RS04215;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS04215;old_locus_tag=YPN_r037 NC_008149.1 tRNAscan-SE tRNA 924640 924732 . + . ID=rna32;Parent=gene842;anticodon=(pos:924674..924676);gbkey=tRNA;product=tRNA-Ser NC_008149.1 tRNAscan-SE exon 924640 924732 . + . ID=id85;Parent=rna32;anticodon=(pos:924674..924676);gbkey=tRNA;product=tRNA-Ser NC_008149.1 RefSeq gene 924741 924817 . + . ID=gene843;Name=YPN_RS04220;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS04220;old_locus_tag=YPN_r038 NC_008149.1 tRNAscan-SE tRNA 924741 924817 . + . ID=rna33;Parent=gene843;anticodon=(pos:924775..924777);gbkey=tRNA;product=tRNA-Arg NC_008149.1 tRNAscan-SE exon 924741 924817 . + . ID=id86;Parent=rna33;anticodon=(pos:924775..924777);gbkey=tRNA;product=tRNA-Arg NC_008149.1 RefSeq gene 924875 924951 . + . ID=gene844;Name=YPN_RS04225;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS04225;old_locus_tag=YPN_r039 NC_008149.1 tRNAscan-SE tRNA 924875 924951 . + . ID=rna34;Parent=gene844;anticodon=(pos:924909..924911);gbkey=tRNA;product=tRNA-Arg NC_008149.1 tRNAscan-SE exon 924875 924951 . + . ID=id87;Parent=rna34;anticodon=(pos:924909..924911);gbkey=tRNA;product=tRNA-Arg NC_008149.1 RefSeq gene 925031 925107 . + . ID=gene845;Name=YPN_RS04230;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS04230;old_locus_tag=YPN_r040 NC_008149.1 tRNAscan-SE tRNA 925031 925107 . + . ID=rna35;Parent=gene845;anticodon=(pos:925065..925067);gbkey=tRNA;product=tRNA-Arg NC_008149.1 tRNAscan-SE exon 925031 925107 . + . ID=id88;Parent=rna35;anticodon=(pos:925065..925067);gbkey=tRNA;product=tRNA-Arg NC_008149.1 RefSeq gene 925530 926096 . + . ID=gene846;Name=YPN_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04235;old_locus_tag=YPN_0791 NC_008149.1 Protein Homology CDS 925530 926096 . + 0 ID=cds809;Parent=gene846;Dbxref=Genbank:WP_002209450.1;Name=WP_002209450.1;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent;gbkey=CDS;product=fructose-1-P/6-phosphogluconate phosphatase;protein_id=WP_002209450.1;transl_table=11 NC_008149.1 RefSeq gene 926093 926521 . + . ID=gene847;Name=YPN_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04240;old_locus_tag=YPN_0792 NC_008149.1 Protein Homology CDS 926093 926521 . + 0 ID=cds810;Parent=gene847;Dbxref=Genbank:WP_002209451.1;Name=WP_002209451.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209451.1;transl_table=11 NC_008149.1 RefSeq gene 926604 928163 . + . ID=gene848;Name=YPN_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04245;old_locus_tag=YPN_0793 NC_008149.1 Protein Homology CDS 926604 928163 . + 0 ID=cds811;Parent=gene848;Dbxref=Genbank:WP_002228236.1;Name=WP_002228236.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_002228236.1;transl_table=11 NC_008149.1 RefSeq gene 928330 928845 . + . ID=gene849;Name=YPN_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04250;old_locus_tag=YPN_0794 NC_008149.1 Protein Homology CDS 928330 928845 . + 0 ID=cds812;Parent=gene849;Dbxref=Genbank:WP_002209453.1;Name=WP_002209453.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11 NC_008149.1 RefSeq repeat_region 928896 931579 . + . ID=id89;gbkey=repeat_region NC_008149.1 RefSeq gene 929204 930226 . + . ID=gene850;Name=YPN_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04255;old_locus_tag=YPN_0796 NC_008149.1 Protein Homology CDS 929204 930226 . + 0 ID=cds813;Parent=gene850;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 930226 931005 . + . ID=gene851;Name=YPN_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04260;old_locus_tag=YPN_0797 NC_008149.1 Protein Homology CDS 930226 931005 . + 0 ID=cds814;Parent=gene851;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 931021 931467 . + . ID=gene852;Name=YPN_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04265;old_locus_tag=YPN_0798 NC_008149.1 Protein Homology CDS 931021 931467 . + 0 ID=cds815;Parent=gene852;Dbxref=Genbank:WP_002228326.1;Name=WP_002228326.1;gbkey=CDS;product=transposase;protein_id=WP_002228326.1;transl_table=11 NC_008149.1 RefSeq gene 931605 932888 . - . ID=gene853;Name=YPN_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04270;old_locus_tag=YPN_0799 NC_008149.1 Protein Homology CDS 931605 932888 . - 0 ID=cds816;Parent=gene853;Dbxref=Genbank:WP_002209454.1;Name=WP_002209454.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209454.1;transl_table=11 NC_008149.1 RefSeq gene 932957 933748 . - . ID=gene854;Name=YPN_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04275;old_locus_tag=YPN_0800 NC_008149.1 Protein Homology CDS 932957 933748 . - 0 ID=cds817;Parent=gene854;Dbxref=Genbank:WP_002209455.1;Name=WP_002209455.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209455.1;transl_table=11 NC_008149.1 RefSeq gene 933914 935275 . + . ID=gene855;Name=YPN_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04280;old_locus_tag=YPN_0801 NC_008149.1 Protein Homology CDS 933914 935275 . + 0 ID=cds818;Parent=gene855;Dbxref=Genbank:WP_002209456.1;Name=WP_002209456.1;gbkey=CDS;product=signal recognition particle protein;protein_id=WP_002209456.1;transl_table=11 NC_008149.1 RefSeq gene 935503 935751 . + . ID=gene856;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=YPN_RS04285;old_locus_tag=YPN_0803 NC_008149.1 Protein Homology CDS 935503 935751 . + 0 ID=cds819;Parent=gene856;Dbxref=Genbank:WP_002209458.1;Name=WP_002209458.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_002209458.1;transl_table=11 NC_008149.1 RefSeq gene 935773 936321 . + . ID=gene857;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=YPN_RS04290;old_locus_tag=YPN_0804 NC_008149.1 Protein Homology CDS 935773 936321 . + 0 ID=cds820;Parent=gene857;Dbxref=Genbank:WP_002209459.1;Name=WP_002209459.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=ribosome maturation factor RimM;protein_id=WP_002209459.1;transl_table=11 NC_008149.1 RefSeq gene 936360 937100 . + . ID=gene858;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=YPN_RS04295;old_locus_tag=YPN_0805 NC_008149.1 Protein Homology CDS 936360 937100 . + 0 ID=cds821;Parent=gene858;Dbxref=Genbank:WP_002222284.1;Name=WP_002222284.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=WP_002222284.1;transl_table=11 NC_008149.1 RefSeq gene 937181 937528 . + . ID=gene859;Name=YPN_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04300;old_locus_tag=YPN_0806 NC_008149.1 Protein Homology CDS 937181 937528 . + 0 ID=cds822;Parent=gene859;Dbxref=Genbank:WP_002209461.1;Name=WP_002209461.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11 NC_008149.1 RefSeq repeat_region 937588 938311 . + . ID=id90;gbkey=repeat_region NC_008149.1 RefSeq gene 937595 937750 . + . ID=gene860;Name=YPN_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04305 NC_008149.1 Protein Homology CDS 937595 937750 . + 0 ID=cds823;Parent=gene860;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 937740 938198 . + . ID=gene861;Name=YPN_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04310;old_locus_tag=YPN_0807 NC_008149.1 Protein Homology CDS 937740 938198 . + 0 ID=cds824;Parent=gene861;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 938501 939268 . - . ID=gene862;Name=YPN_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04315;old_locus_tag=YPN_0808 NC_008149.1 Protein Homology CDS 938501 939268 . - 0 ID=cds825;Parent=gene862;Dbxref=Genbank:WP_002209462.1;Name=WP_002209462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209462.1;transl_table=11 NC_008149.1 RefSeq gene 939591 939887 . - . ID=gene863;Name=YPN_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04320;old_locus_tag=YPN_0809 NC_008149.1 Protein Homology CDS 939591 939887 . - 0 ID=cds826;Parent=gene863;Dbxref=Genbank:WP_002217480.1;Name=WP_002217480.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002217480.1;transl_table=11 NC_008149.1 RefSeq gene 939875 940186 . - . ID=gene864;Name=YPN_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04325;old_locus_tag=YPN_0810 NC_008149.1 Protein Homology CDS 939875 940186 . - 0 ID=cds827;Parent=gene864;Dbxref=Genbank:WP_002228328.1;Name=WP_002228328.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002228328.1;transl_table=11 NC_008149.1 RefSeq gene 940255 940872 . - . ID=gene865;Name=YPN_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04330;old_locus_tag=YPN_0811 NC_008149.1 Protein Homology CDS 940255 940872 . - 0 ID=cds828;Parent=gene865;Dbxref=Genbank:WP_002217484.1;Name=WP_002217484.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002217484.1;transl_table=11 NC_008149.1 RefSeq gene 941364 942080 . - . ID=gene866;Name=YPN_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04335;old_locus_tag=YPN_0812 NC_008149.1 Protein Homology CDS 941364 942080 . - 0 ID=cds829;Parent=gene866;Dbxref=Genbank:WP_002223245.1;Name=WP_002223245.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002223245.1;transl_table=11 NC_008149.1 RefSeq gene 942313 943383 . + . ID=gene867;Name=YPN_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04340;old_locus_tag=YPN_0813 NC_008149.1 Protein Homology CDS 942313 943383 . + 0 ID=cds830;Parent=gene867;Dbxref=Genbank:WP_002228238.1;Name=WP_002228238.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002228238.1;transl_table=11 NC_008149.1 RefSeq gene 943396 944517 . + . ID=gene868;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=YPN_RS04345;old_locus_tag=YPN_0814 NC_008149.1 Protein Homology CDS 943396 944517 . + 0 ID=cds831;Parent=gene868;Dbxref=Genbank:WP_002209465.1;Name=WP_002209465.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=chorismate mutase;protein_id=WP_002209465.1;transl_table=11 NC_008149.1 RefSeq gene 944622 945779 . - . ID=gene869;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=YPN_RS04350;old_locus_tag=YPN_0815 NC_008149.1 Protein Homology CDS 944622 945779 . - 0 ID=cds832;Parent=gene869;Dbxref=Genbank:WP_002228330.1;Name=WP_002228330.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_002228330.1;transl_table=11 NC_008149.1 RefSeq repeat_region 945910 946629 . + . ID=id91;gbkey=repeat_region NC_008149.1 RefSeq gene 945914 946072 . + . ID=gene870;Name=YPN_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04355 NC_008149.1 Protein Homology CDS 945914 946072 . + 0 ID=cds833;Parent=gene870;Dbxref=Genbank:WP_002217797.1;Name=WP_002217797.1;gbkey=CDS;product=invasin;protein_id=WP_002217797.1;transl_table=11 NC_008149.1 RefSeq gene 946062 946520 . + . ID=gene871;Name=YPN_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04360;old_locus_tag=YPN_0816 NC_008149.1 Protein Homology CDS 946062 946520 . + 0 ID=cds834;Parent=gene871;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 946851 947213 . - . ID=gene872;Name=YPN_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04365;old_locus_tag=YPN_0817 NC_008149.1 Protein Homology CDS 946851 947213 . - 0 ID=cds835;Parent=gene872;Dbxref=Genbank:WP_002209468.1;Name=WP_002209468.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;product=cold-shock protein;protein_id=WP_002209468.1;transl_table=11 NC_008149.1 RefSeq gene 947568 948299 . - . ID=gene873;Name=YPN_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04370;old_locus_tag=YPN_0818 NC_008149.1 Protein Homology CDS 947568 948299 . - 0 ID=cds836;Parent=gene873;Dbxref=Genbank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;product=outer membrane biogenesis protein BamD;protein_id=WP_002209469.1;transl_table=11 NC_008149.1 RefSeq gene 948435 949412 . + . ID=gene874;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=YPN_RS04375;old_locus_tag=YPN_0819 NC_008149.1 Protein Homology CDS 948435 949412 . + 0 ID=cds837;Parent=gene874;Dbxref=Genbank:WP_002209470.1;Name=WP_002209470.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=ribosomal large subunit pseudouridine synthase D;protein_id=WP_002209470.1;transl_table=11 NC_008149.1 RefSeq gene 949414 950145 . + . ID=gene875;Name=YPN_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04380;old_locus_tag=YPN_0820 NC_008149.1 Protein Homology CDS 949414 950145 . + 0 ID=cds838;Parent=gene875;Dbxref=Genbank:WP_002209471.1;Name=WP_002209471.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209471.1;transl_table=11 NC_008149.1 RefSeq gene 950275 952848 . + . ID=gene876;Name=YPN_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04385;old_locus_tag=YPN_0821 NC_008149.1 Protein Homology CDS 950275 952848 . + 0 ID=cds839;Parent=gene876;Dbxref=Genbank:WP_002217405.1;Name=WP_002217405.1;gbkey=CDS;product=chaperone protein ClpB;protein_id=WP_002217405.1;transl_table=11 NC_008149.1 RefSeq repeat_region 952930 958826 . + . ID=id92;gbkey=repeat_region NC_008149.1 RefSeq gene 953362 954910 . + . ID=gene877;Name=YPN_RS04390;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS04390;old_locus_tag=YPN_r041 NC_008149.1 RefSeq rRNA 953362 954910 . + . ID=rna36;Parent=gene877;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq exon 953362 954910 . + . ID=id93;Parent=rna36;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq gene 955010 955086 . + . ID=gene878;Name=YPN_RS04395;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS04395;old_locus_tag=YPN_r042 NC_008149.1 tRNAscan-SE tRNA 955010 955086 . + . ID=rna37;Parent=gene878;anticodon=(pos:955044..955046);gbkey=tRNA;product=tRNA-Ile NC_008149.1 tRNAscan-SE exon 955010 955086 . + . ID=id94;Parent=rna37;anticodon=(pos:955044..955046);gbkey=tRNA;product=tRNA-Ile NC_008149.1 RefSeq gene 955138 955213 . + . ID=gene879;Name=YPN_RS04400;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS04400;old_locus_tag=YPN_r043 NC_008149.1 tRNAscan-SE tRNA 955138 955213 . + . ID=rna38;Parent=gene879;anticodon=(pos:955171..955173);gbkey=tRNA;product=tRNA-Ala NC_008149.1 tRNAscan-SE exon 955138 955213 . + . ID=id95;Parent=rna38;anticodon=(pos:955171..955173);gbkey=tRNA;product=tRNA-Ala NC_008149.1 RefSeq gene 955423 958356 . + . ID=gene880;Name=YPN_RS04405;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS04405;old_locus_tag=YPN_r044 NC_008149.1 RefSeq rRNA 955423 958356 . + . ID=rna39;Parent=gene880;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq exon 955423 958356 . + . ID=id96;Parent=rna39;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq gene 958448 958563 . + . ID=gene881;Name=YPN_RS04410;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS04410;old_locus_tag=YPN_r045 NC_008149.1 cmsearch rRNA 958448 958563 . + . ID=rna40;Parent=gene881;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 cmsearch exon 958448 958563 . + . ID=id97;Parent=rna40;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 RefSeq gene 958651 958842 . + . ID=gene882;Name=YPN_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04415 NC_008149.1 Protein Homology CDS 958651 958842 . + 0 ID=cds840;Parent=gene882;Dbxref=Genbank:WP_002360510.1;Name=WP_002360510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002360510.1;transl_table=11 NC_008149.1 RefSeq gene 958951 959292 . - . ID=gene883;Name=YPN_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04420;old_locus_tag=YPN_0822 NC_008149.1 Protein Homology CDS 958951 959292 . - 0 ID=cds841;Parent=gene883;Dbxref=Genbank:WP_002208752.1;Name=WP_002208752.1;Note=required for high salt suppression of motility;gbkey=CDS;product=lipoprotein;protein_id=WP_002208752.1;transl_table=11 NC_008149.1 RefSeq gene 959354 960709 . - . ID=gene884;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=YPN_RS04425;old_locus_tag=YPN_0823 NC_008149.1 Protein Homology CDS 959354 960709 . - 0 ID=cds842;Parent=gene884;Dbxref=Genbank:WP_002208751.1;Name=WP_002208751.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_002208751.1;transl_table=11 NC_008149.1 RefSeq gene 960885 963527 . - . ID=gene885;Name=YPN_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04430;old_locus_tag=YPN_0824 NC_008149.1 Protein Homology CDS 960885 963527 . - 0 ID=cds843;Parent=gene885;Dbxref=Genbank:WP_002223249.1;Name=WP_002223249.1;Note=catalyzes the acetylation of lysine;gbkey=CDS;product=protein lysine acetyltransferase;protein_id=WP_002223249.1;transl_table=11 NC_008149.1 RefSeq gene 963570 964319 . - . ID=gene886;Name=YPN_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04435;old_locus_tag=YPN_0825 NC_008149.1 Protein Homology CDS 963570 964319 . - 0 ID=cds844;Parent=gene886;Dbxref=Genbank:WP_002208749.1;Name=WP_002208749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208749.1;transl_table=11 NC_008149.1 RefSeq gene 964489 964926 . - . ID=gene887;Name=YPN_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04440;old_locus_tag=YPN_0826 NC_008149.1 Protein Homology CDS 964489 964926 . - 0 ID=cds845;Parent=gene887;Dbxref=Genbank:WP_002216643.1;Name=WP_002216643.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002216643.1;transl_table=11 NC_008149.1 RefSeq gene 965178 966344 . + . ID=gene888;Name=YPN_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04445;old_locus_tag=YPN_0827 NC_008149.1 Protein Homology CDS 965178 966344 . + 0 ID=cds846;Parent=gene888;Dbxref=Genbank:WP_002208747.1;Name=WP_002208747.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208747.1;transl_table=11 NC_008149.1 RefSeq gene 966467 968002 . - . ID=gene889;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=YPN_RS04450;old_locus_tag=YPN_0828 NC_008149.1 Protein Homology CDS 966467 968002 . - 0 ID=cds847;Parent=gene889;Dbxref=Genbank:WP_002208746.1;Name=WP_002208746.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug effux MFS transporter subunit EmrB;protein_id=WP_002208746.1;transl_table=11 NC_008149.1 RefSeq gene 968041 969213 . - . ID=gene890;Name=YPN_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04455;old_locus_tag=YPN_0829 NC_008149.1 Protein Homology CDS 968041 969213 . - 0 ID=cds848;Parent=gene890;Dbxref=Genbank:WP_002208745.1;Name=WP_002208745.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;product=multidrug resistance protein A;protein_id=WP_002208745.1;transl_table=11 NC_008149.1 RefSeq gene 969597 970109 . - . ID=gene891;Name=YPN_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04460;old_locus_tag=YPN_0830 NC_008149.1 Protein Homology CDS 969597 970109 . - 0 ID=cds849;Parent=gene891;Dbxref=Genbank:WP_002208744.1;Name=WP_002208744.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208744.1;transl_table=11 NC_008149.1 RefSeq gene 970281 970622 . - . ID=gene892;Name=YPN_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04465;old_locus_tag=YPN_0831 NC_008149.1 Protein Homology CDS 970281 970622 . - 0 ID=cds850;Parent=gene892;Dbxref=Genbank:WP_002208743.1;Name=WP_002208743.1;gbkey=CDS;product=branched-chain amino acid ABC transporter permease;protein_id=WP_002208743.1;transl_table=11 NC_008149.1 RefSeq gene 970619 971392 . - . ID=gene893;Name=YPN_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04470;old_locus_tag=YPN_0832 NC_008149.1 Protein Homology CDS 970619 971392 . - 0 ID=cds851;Parent=gene893;Dbxref=Genbank:WP_002208742.1;Name=WP_002208742.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002208742.1;transl_table=11 NC_008149.1 RefSeq gene 971552 972751 . - . ID=gene894;Name=YPN_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04475;old_locus_tag=YPN_0833 NC_008149.1 Protein Homology CDS 971552 972751 . - 0 ID=cds852;Parent=gene894;Dbxref=Genbank:WP_002208741.1;Name=WP_002208741.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002208741.1;transl_table=11 NC_008149.1 RefSeq gene 972979 973365 . - . ID=gene895;Name=YPN_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04480;old_locus_tag=YPN_0834 NC_008149.1 Protein Homology CDS 972979 973365 . - 0 ID=cds853;Parent=gene895;Dbxref=Genbank:WP_002264506.1;Name=WP_002264506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002264506.1;transl_table=11 NC_008149.1 RefSeq gene 973475 974872 . - . ID=gene896;Name=YPN_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04485;old_locus_tag=YPN_0835 NC_008149.1 Protein Homology CDS 973475 974872 . - 0 ID=cds854;Parent=gene896;Dbxref=Genbank:WP_002208739.1;Name=WP_002208739.1;Note=catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia;gbkey=CDS;product=amidase;protein_id=WP_002208739.1;transl_table=11 NC_008149.1 RefSeq gene 974869 975072 . - . ID=gene897;Name=YPN_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04490;old_locus_tag=YPN_0836 NC_008149.1 Protein Homology CDS 974869 975072 . - 0 ID=cds855;Parent=gene897;Dbxref=Genbank:WP_002208738.1;Name=WP_002208738.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208738.1;transl_table=11 NC_008149.1 RefSeq gene 975382 976215 . + . ID=gene898;Name=YPN_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04495;old_locus_tag=YPN_0838 NC_008149.1 Protein Homology CDS 975382 976215 . + 0 ID=cds856;Parent=gene898;Dbxref=Genbank:WP_002208736.1;Name=WP_002208736.1;gbkey=CDS;product=RpiR family transcriptional regulator;protein_id=WP_002208736.1;transl_table=11 NC_008149.1 RefSeq gene 976217 976432 . + . ID=gene899;Name=YPN_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04500 NC_008149.1 Protein Homology CDS 976217 976432 . + 0 ID=cds857;Parent=gene899;Dbxref=Genbank:WP_002215957.1;Name=WP_002215957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215957.1;transl_table=11 NC_008149.1 RefSeq gene 976543 977331 . + . ID=gene900;Name=YPN_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04505;old_locus_tag=YPN_0839 NC_008149.1 Protein Homology CDS 976543 977331 . + 0 ID=cds858;Parent=gene900;Dbxref=Genbank:WP_002208735.1;Name=WP_002208735.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002208735.1;transl_table=11 NC_008149.1 RefSeq gene 977344 978012 . + . ID=gene901;Name=YPN_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04510;old_locus_tag=YPN_0840 NC_008149.1 Protein Homology CDS 977344 978012 . + 0 ID=cds859;Parent=gene901;Dbxref=Genbank:WP_002208734.1;Name=WP_002208734.1;gbkey=CDS;product=polar amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11 NC_008149.1 RefSeq gene 978009 978662 . + . ID=gene902;Name=YPN_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04515;old_locus_tag=YPN_0841 NC_008149.1 Protein Homology CDS 978009 978662 . + 0 ID=cds860;Parent=gene902;Dbxref=Genbank:WP_002208733.1;Name=WP_002208733.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002208733.1;transl_table=11 NC_008149.1 RefSeq gene 978643 979389 . + . ID=gene903;Name=YPN_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04520;old_locus_tag=YPN_0842 NC_008149.1 Protein Homology CDS 978643 979389 . + 0 ID=cds861;Parent=gene903;Dbxref=Genbank:WP_002208732.1;Name=WP_002208732.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002208732.1;transl_table=11 NC_008149.1 RefSeq gene 979421 980764 . + . ID=gene904;Name=YPN_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04525;old_locus_tag=YPN_0843 NC_008149.1 Protein Homology CDS 979421 980764 . + 0 ID=cds862;Parent=gene904;Dbxref=Genbank:WP_002228332.1;Name=WP_002228332.1;gbkey=CDS;product=aminotransferase V;protein_id=WP_002228332.1;transl_table=11 NC_008149.1 RefSeq gene 980764 982047 . + . ID=gene905;Name=YPN_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04530;old_locus_tag=YPN_0844 NC_008149.1 Protein Homology CDS 980764 982047 . + 0 ID=cds863;Parent=gene905;Dbxref=Genbank:WP_002224964.1;Name=WP_002224964.1;gbkey=CDS;product=allantoate amidohydrolase;protein_id=WP_002224964.1;transl_table=11 NC_008149.1 RefSeq repeat_region 982230 982409 . + . ID=id98;gbkey=repeat_region NC_008149.1 RefSeq gene 983136 984926 . + . ID=gene906;Name=YPN_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04535;old_locus_tag=YPN_0845 NC_008149.1 Protein Homology CDS 983136 984926 . + 0 ID=cds864;Parent=gene906;Dbxref=Genbank:WP_002214693.1;Name=WP_002214693.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002214693.1;transl_table=11 NC_008149.1 RefSeq gene 984967 986127 . + . ID=gene907;Name=YPN_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04540;old_locus_tag=YPN_0846 NC_008149.1 Protein Homology CDS 984967 986127 . + 0 ID=cds865;Parent=gene907;Dbxref=Genbank:WP_002228333.1;Name=WP_002228333.1;gbkey=CDS;product=adhesin;protein_id=WP_002228333.1;transl_table=11 NC_008149.1 RefSeq gene 986856 990701 . + . ID=gene908;Name=YPN_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04545;old_locus_tag=YPN_0847 NC_008149.1 Protein Homology CDS 986856 990701 . + 0 ID=cds866;Parent=gene908;Dbxref=Genbank:WP_025470848.1;Name=WP_025470848.1;gbkey=CDS;product=adhesin;protein_id=WP_025470848.1;transl_table=11 NC_008149.1 RefSeq gene 990856 992709 . + . ID=gene909;Name=YPN_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04550;old_locus_tag=YPN_0848 NC_008149.1 Protein Homology CDS 990856 992709 . + 0 ID=cds867;Parent=gene909;Dbxref=Genbank:WP_002208722.1;Name=WP_002208722.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_002208722.1;transl_table=11 NC_008149.1 RefSeq gene 992711 993457 . + . ID=gene910;Name=YPN_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04555;old_locus_tag=YPN_0849 NC_008149.1 Protein Homology CDS 992711 993457 . + 0 ID=cds868;Parent=gene910;Dbxref=Genbank:WP_002208721.1;Name=WP_002208721.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208721.1;transl_table=11 NC_008149.1 RefSeq gene 993629 996076 . - . ID=gene911;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=YPN_RS04560;old_locus_tag=YPN_0850 NC_008149.1 Protein Homology CDS 993629 996076 . - 0 ID=cds869;Parent=gene911;Dbxref=Genbank:WP_002214691.1;Name=WP_002214691.1;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;gbkey=CDS;gene=fadE;product=acyl-CoA dehydrogenase;protein_id=WP_002214691.1;transl_table=11 NC_008149.1 RefSeq gene 996316 996897 . + . ID=gene912;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=YPN_RS04565;old_locus_tag=YPN_0851 NC_008149.1 Protein Homology CDS 996316 996897 . + 0 ID=cds870;Parent=gene912;Dbxref=Genbank:WP_002208720.1;Name=WP_002208720.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=WP_002208720.1;transl_table=11 NC_008149.1 RefSeq gene 997100 997873 . + . ID=gene913;Name=YPN_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04570;old_locus_tag=YPN_0852 NC_008149.1 Protein Homology CDS 997100 997873 . + 0 ID=cds871;Parent=gene913;Dbxref=Genbank:WP_002208719.1;Name=WP_002208719.1;gbkey=CDS;product=glutamine amidotransferase;protein_id=WP_002208719.1;transl_table=11 NC_008149.1 RefSeq gene 997838 998500 . - . ID=gene914;Name=YPN_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04575;old_locus_tag=YPN_0853 NC_008149.1 Protein Homology CDS 997838 998500 . - 0 ID=cds872;Parent=gene914;Dbxref=Genbank:WP_002228335.1;Name=WP_002228335.1;gbkey=CDS;product=transpeptidase;protein_id=WP_002228335.1;transl_table=11 NC_008149.1 RefSeq gene 999082 1000425 . + . ID=gene915;Name=YPN_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04580;old_locus_tag=YPN_0855 NC_008149.1 Protein Homology CDS 999082 1000425 . + 0 ID=cds873;Parent=gene915;Dbxref=Genbank:WP_002208717.1;Name=WP_002208717.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit A;protein_id=WP_002208717.1;transl_table=11 NC_008149.1 RefSeq gene 1000429 1001670 . + . ID=gene916;Name=YPN_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04585;old_locus_tag=YPN_0856 NC_008149.1 Protein Homology CDS 1000429 1001670 . + 0 ID=cds874;Parent=gene916;Dbxref=Genbank:WP_002208716.1;Name=WP_002208716.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit B;protein_id=WP_002208716.1;transl_table=11 NC_008149.1 RefSeq gene 1001660 1002460 . + . ID=gene917;Name=YPN_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04590;old_locus_tag=YPN_0857 NC_008149.1 Protein Homology CDS 1001660 1002460 . + 0 ID=cds875;Parent=gene917;Dbxref=Genbank:WP_002208715.1;Name=WP_002208715.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=WP_002208715.1;transl_table=11 NC_008149.1 RefSeq gene 1002453 1003082 . + . ID=gene918;Name=YPN_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04595;old_locus_tag=YPN_0858 NC_008149.1 Protein Homology CDS 1002453 1003082 . + 0 ID=cds876;Parent=gene918;Dbxref=Genbank:WP_002208714.1;Name=WP_002208714.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=NADH-quinone reductase subunit D;protein_id=WP_002208714.1;transl_table=11 NC_008149.1 RefSeq gene 1003089 1003685 . + . ID=gene919;Name=YPN_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04600;old_locus_tag=YPN_0859 NC_008149.1 Protein Homology CDS 1003089 1003685 . + 0 ID=cds877;Parent=gene919;Dbxref=Genbank:WP_002208713.1;Name=WP_002208713.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002208713.1;transl_table=11 NC_008149.1 RefSeq gene 1003701 1004924 . + . ID=gene920;Name=YPN_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04605;old_locus_tag=YPN_0860 NC_008149.1 Protein Homology CDS 1003701 1004924 . + 0 ID=cds878;Parent=gene920;Dbxref=Genbank:WP_002208711.1;Name=WP_002208711.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit F;protein_id=WP_002208711.1;transl_table=11 NC_008149.1 RefSeq gene 1004992 1005987 . + . ID=gene921;Name=YPN_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04610;old_locus_tag=YPN_0861 NC_008149.1 Protein Homology CDS 1004992 1005987 . + 0 ID=cds879;Parent=gene921;Dbxref=Genbank:WP_002208710.1;Name=WP_002208710.1;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=WP_002208710.1;transl_table=11 NC_008149.1 RefSeq gene 1006000 1006227 . + . ID=gene922;Name=YPN_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04615;old_locus_tag=YPN_0862 NC_008149.1 Protein Homology CDS 1006000 1006227 . + 0 ID=cds880;Parent=gene922;Dbxref=Genbank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214684.1;transl_table=11 NC_008149.1 RefSeq gene 1006471 1007418 . - . ID=gene923;Name=YPN_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04620;old_locus_tag=YPN_0863 NC_008149.1 Protein Homology CDS 1006471 1007418 . - 0 ID=cds881;Parent=gene923;Dbxref=Genbank:WP_002208709.1;Name=WP_002208709.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002208709.1;transl_table=11 NC_008149.1 RefSeq gene 1007774 1008832 . + . ID=gene924;Name=YPN_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04625;old_locus_tag=YPN_0864 NC_008149.1 Protein Homology CDS 1007774 1008832 . + 0 ID=cds882;Parent=gene924;Dbxref=Genbank:WP_002208708.1;Name=WP_002208708.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;product=DNA polymerase IV;protein_id=WP_002208708.1;transl_table=11 NC_008149.1 RefSeq gene 1008946 1010406 . - . ID=gene925;Name=YPN_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04630;old_locus_tag=YPN_0865 NC_008149.1 Protein Homology CDS 1008946 1010406 . - 0 ID=cds883;Parent=gene925;Dbxref=Genbank:WP_002208707.1;Name=WP_002208707.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=WP_002208707.1;transl_table=11 NC_008149.1 RefSeq gene 1011404 1011559 . + . ID=gene926;Name=YPN_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04635 NC_008149.1 Protein Homology CDS 1011404 1011559 . + 0 ID=cds884;Parent=gene926;Dbxref=Genbank:WP_002216045.1;Name=WP_002216045.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216045.1;transl_table=11 NC_008149.1 RefSeq gene 1012407 1013192 . + . ID=gene927;Name=YPN_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04640;old_locus_tag=YPN_0866 NC_008149.1 Protein Homology CDS 1012407 1013192 . + 0 ID=cds885;Parent=gene927;Dbxref=Genbank:WP_002208706.1;Name=WP_002208706.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208706.1;transl_table=11 NC_008149.1 RefSeq gene 1013652 1015256 . - . ID=gene928;Name=YPN_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04645;old_locus_tag=YPN_0867 NC_008149.1 Protein Homology CDS 1013652 1015256 . - 0 ID=cds886;Parent=gene928;Dbxref=Genbank:WP_002208705.1;Name=WP_002208705.1;gbkey=CDS;product=chitin-binding domain protein;protein_id=WP_002208705.1;transl_table=11 NC_008149.1 RefSeq gene 1015453 1015758 . - . ID=gene929;Name=YPN_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04650 NC_008149.1 Protein Homology CDS 1015453 1015758 . - 0 ID=cds887;Parent=gene929;Dbxref=Genbank:WP_002216043.1;Name=WP_002216043.1;gbkey=CDS;product=holin;protein_id=WP_002216043.1;transl_table=11 NC_008149.1 RefSeq gene 1016185 1016643 . + . ID=gene930;Name=YPN_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04655;old_locus_tag=YPN_0868 NC_008149.1 Protein Homology CDS 1016185 1016643 . + 0 ID=cds888;Parent=gene930;Dbxref=Genbank:WP_002208704.1;Name=WP_002208704.1;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;gbkey=CDS;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11 NC_008149.1 RefSeq gene 1016770 1018017 . + . ID=gene931;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=YPN_RS04660;old_locus_tag=YPN_0869 NC_008149.1 Protein Homology CDS 1016770 1018017 . + 0 ID=cds889;Parent=gene931;Dbxref=Genbank:WP_002208703.1;Name=WP_002208703.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=WP_002208703.1;transl_table=11 NC_008149.1 RefSeq gene 1018077 1018478 . + . ID=gene932;Name=YPN_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04665;old_locus_tag=YPN_0870 NC_008149.1 Protein Homology CDS 1018077 1018478 . + 0 ID=cds890;Parent=gene932;Dbxref=Genbank:WP_002208702.1;Name=WP_002208702.1;gbkey=CDS;product=sigma factor-binding protein Crl;protein_id=WP_002208702.1;transl_table=11 NC_008149.1 RefSeq gene 1018655 1019758 . + . ID=gene933;Name=YPN_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04670;old_locus_tag=YPN_0871 NC_008149.1 Protein Homology CDS 1018655 1019758 . + 0 ID=cds891;Parent=gene933;Dbxref=Genbank:WP_002208701.1;Name=WP_002208701.1;gbkey=CDS;product=glutamate 5-kinase;protein_id=WP_002208701.1;transl_table=11 NC_008149.1 RefSeq gene 1019768 1021027 . + . ID=gene934;Name=YPN_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04675;old_locus_tag=YPN_0872 NC_008149.1 Protein Homology CDS 1019768 1021027 . + 0 ID=cds892;Parent=gene934;Dbxref=Genbank:WP_002208700.1;Name=WP_002208700.1;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=WP_002208700.1;transl_table=11 NC_008149.1 RefSeq gene 1021364 1022113 . + . ID=gene935;Name=YPN_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04680;old_locus_tag=YPN_0873 NC_008149.1 Protein Homology CDS 1021364 1022113 . + 0 ID=cds893;Parent=gene935;Dbxref=Genbank:WP_002264519.1;Name=WP_002264519.1;gbkey=CDS;product=flagellar brake protein YcgR;protein_id=WP_002264519.1;transl_table=11 NC_008149.1 RefSeq gene 1022311 1022565 . + . ID=gene936;Name=YPN_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04685;old_locus_tag=YPN_0874 NC_008149.1 Protein Homology CDS 1022311 1022565 . + 0 ID=cds894;Parent=gene936;Dbxref=Genbank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208698.1;transl_table=11 NC_008149.1 RefSeq gene 1022769 1023332 . + . ID=gene937;Name=YPN_RS04690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS04690;old_locus_tag=YPN_0876;partial=true;pseudo=true;start_range=.,1022769 NC_008149.1 Protein Homology CDS 1022769 1023332 . + 0 ID=cds895;Parent=gene937;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=SAM-dependent methyltransferase;pseudo=true;start_range=.,1022769;transl_table=11 NC_008149.1 RefSeq gene 1023579 1023794 . - . ID=gene938;Name=YPN_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04695 NC_008149.1 Protein Homology CDS 1023579 1023794 . - 0 ID=cds896;Parent=gene938;Dbxref=Genbank:WP_002215536.1;Name=WP_002215536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215536.1;transl_table=11 NC_008149.1 RefSeq gene 1024062 1024619 . + . ID=gene939;Name=YPN_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04700;old_locus_tag=YPN_0877 NC_008149.1 Protein Homology CDS 1024062 1024619 . + 0 ID=cds897;Parent=gene939;Dbxref=Genbank:WP_002208694.1;Name=WP_002208694.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002208694.1;transl_table=11 NC_008149.1 RefSeq gene 1024866 1025390 . + . ID=gene940;Name=YPN_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04705;old_locus_tag=YPN_0878 NC_008149.1 Protein Homology CDS 1024866 1025390 . + 0 ID=cds898;Parent=gene940;Dbxref=Genbank:WP_002208693.1;Name=WP_002208693.1;gbkey=CDS;product=shikimate kinase;protein_id=WP_002208693.1;transl_table=11 NC_008149.1 RefSeq gene 1025646 1025816 . + . ID=gene941;Name=YPN_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04710 NC_008149.1 Protein Homology CDS 1025646 1025816 . + 0 ID=cds899;Parent=gene941;Dbxref=Genbank:WP_002215533.1;Name=WP_002215533.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215533.1;transl_table=11 NC_008149.1 RefSeq gene 1025880 1026167 . + . ID=gene942;Name=YPN_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04715;old_locus_tag=YPN_0879 NC_008149.1 Protein Homology CDS 1025880 1026167 . + 0 ID=cds900;Parent=gene942;Dbxref=Genbank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208692.1;transl_table=11 NC_008149.1 RefSeq gene 1026403 1027314 . - . ID=gene943;Name=YPN_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04720;old_locus_tag=YPN_0880 NC_008149.1 Protein Homology CDS 1026403 1027314 . - 0 ID=cds901;Parent=gene943;Dbxref=Genbank:WP_002208691.1;Name=WP_002208691.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;product=recombination-associated protein RdgC;protein_id=WP_002208691.1;transl_table=11 NC_008149.1 RefSeq gene 1027647 1028561 . + . ID=gene944;Name=YPN_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04725;old_locus_tag=YPN_0881 NC_008149.1 Protein Homology CDS 1027647 1028561 . + 0 ID=cds902;Parent=gene944;Dbxref=Genbank:WP_002208690.1;Name=WP_002208690.1;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;product=fructokinase;protein_id=WP_002208690.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1028616 1028909 . + . ID=id99;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 1028911 1029035 . + . ID=id100;gbkey=repeat_region NC_008149.1 RefSeq gene 1029163 1032852 . - . ID=gene945;Name=YPN_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04730;old_locus_tag=YPN_0882 NC_008149.1 Protein Homology CDS 1029163 1032852 . - 0 ID=cds903;Parent=gene945;Dbxref=Genbank:WP_002223265.1;Name=WP_002223265.1;gbkey=CDS;product=ATP-dependent dsDNA exonuclease;protein_id=WP_002223265.1;transl_table=11 NC_008149.1 RefSeq gene 1032849 1034093 . - . ID=gene946;Name=YPN_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04735;old_locus_tag=YPN_0883 NC_008149.1 Protein Homology CDS 1032849 1034093 . - 0 ID=cds904;Parent=gene946;Dbxref=Genbank:WP_002208687.1;Name=WP_002208687.1;Note=with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity;gbkey=CDS;product=exonuclease SbcD;protein_id=WP_002208687.1;transl_table=11 NC_008149.1 RefSeq gene 1034212 1034331 . + . ID=gene947;Name=YPN_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04740 NC_008149.1 Protein Homology CDS 1034212 1034331 . + 0 ID=cds905;Parent=gene947;Dbxref=Genbank:WP_002208686.1;Name=WP_002208686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208686.1;transl_table=11 NC_008149.1 RefSeq gene 1034361 1035050 . + . ID=gene948;Name=YPN_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04745;old_locus_tag=YPN_0884 NC_008149.1 Protein Homology CDS 1034361 1035050 . + 0 ID=cds906;Parent=gene948;Dbxref=Genbank:WP_002208685.1;Name=WP_002208685.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208685.1;transl_table=11 NC_008149.1 RefSeq gene 1035075 1036391 . + . ID=gene949;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=YPN_RS04750;old_locus_tag=YPN_0885 NC_008149.1 Protein Homology CDS 1035075 1036391 . + 0 ID=cds907;Parent=gene949;Dbxref=Genbank:WP_002208684.1;Name=WP_002208684.1;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein;protein_id=WP_002208684.1;transl_table=11 NC_008149.1 RefSeq gene 1036413 1037477 . + . ID=gene950;Name=YPN_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04755;old_locus_tag=YPN_0886 NC_008149.1 Protein Homology CDS 1036413 1037477 . + 0 ID=cds908;Parent=gene950;Dbxref=Genbank:WP_002215524.1;Name=WP_002215524.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215524.1;transl_table=11 NC_008149.1 RefSeq gene 1037951 1039270 . + . ID=gene951;Name=YPN_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04760;old_locus_tag=YPN_0887 NC_008149.1 Protein Homology CDS 1037951 1039270 . + 0 ID=cds909;Parent=gene951;Dbxref=Genbank:WP_002208680.1;Name=WP_002208680.1;Note=sodium:branched-chain amino acid symporter;gbkey=CDS;product=branched-chain amino acid transporter 2 carrier protein BrnQ;protein_id=WP_002208680.1;transl_table=11 NC_008149.1 RefSeq gene 1039346 1040737 . + . ID=gene952;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPN_RS04765;old_locus_tag=YPN_0888 NC_008149.1 Protein Homology CDS 1039346 1040737 . + 0 ID=cds910;Parent=gene952;Dbxref=Genbank:WP_002223269.1;Name=WP_002223269.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002223269.1;transl_table=11 NC_008149.1 RefSeq gene 1041298 1043127 . + . ID=gene953;Name=YPN_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04770;old_locus_tag=YPN_0889 NC_008149.1 Protein Homology CDS 1041298 1043127 . + 0 ID=cds911;Parent=gene953;Dbxref=Genbank:WP_002208678.1;Name=WP_002208678.1;gbkey=CDS;product=maltodextrin glucosidase;protein_id=WP_002208678.1;transl_table=11 NC_008149.1 RefSeq gene 1043282 1043962 . + . ID=gene954;Name=YPN_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04775;old_locus_tag=YPN_0890 NC_008149.1 Protein Homology CDS 1043282 1043962 . + 0 ID=cds912;Parent=gene954;Dbxref=Genbank:WP_002208677.1;Name=WP_002208677.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002208677.1;transl_table=11 NC_008149.1 RefSeq gene 1044170 1045684 . - . ID=gene955;Name=YPN_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04780;old_locus_tag=YPN_0891 NC_008149.1 Protein Homology CDS 1044170 1045684 . - 0 ID=cds913;Parent=gene955;Dbxref=Genbank:WP_002216937.1;Name=WP_002216937.1;gbkey=CDS;product=gamma-glutamyltransferase;protein_id=WP_002216937.1;transl_table=11 NC_008149.1 RefSeq gene 1045681 1045935 . - . ID=gene956;Name=YPN_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04785;old_locus_tag=YPN_0892 NC_008149.1 Protein Homology CDS 1045681 1045935 . - 0 ID=cds914;Parent=gene956;Dbxref=Genbank:WP_002216934.1;Name=WP_002216934.1;gbkey=CDS;product=gamma-glutamyltranspeptidase;protein_id=WP_002216934.1;transl_table=11 NC_008149.1 RefSeq gene 1046104 1046235 . + . ID=gene957;Name=YPN_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04790 NC_008149.1 Protein Homology CDS 1046104 1046235 . + 0 ID=cds915;Parent=gene957;Dbxref=Genbank:WP_002216930.1;Name=WP_002216930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216930.1;transl_table=11 NC_008149.1 RefSeq gene 1046324 1046926 . - . ID=gene958;Name=YPN_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04795;old_locus_tag=YPN_0893 NC_008149.1 Protein Homology CDS 1046324 1046926 . - 0 ID=cds916;Parent=gene958;Dbxref=Genbank:WP_002208675.1;Name=WP_002208675.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_002208675.1;transl_table=11 NC_008149.1 RefSeq gene 1047225 1047806 . - . ID=gene959;Name=YPN_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04800;old_locus_tag=YPN_0894 NC_008149.1 Protein Homology CDS 1047225 1047806 . - 0 ID=cds917;Parent=gene959;Dbxref=Genbank:WP_002216927.1;Name=WP_002216927.1;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;gbkey=CDS;product=ACP phosphodiesterase;protein_id=WP_002216927.1;transl_table=11 NC_008149.1 RefSeq gene 1048009 1049079 . + . ID=gene960;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=YPN_RS04805;old_locus_tag=YPN_0895 NC_008149.1 Protein Homology CDS 1048009 1049079 . + 0 ID=cds918;Parent=gene960;Dbxref=Genbank:WP_002208673.1;Name=WP_002208673.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_002208673.1;transl_table=11 NC_008149.1 RefSeq gene 1049172 1050296 . + . ID=gene961;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=YPN_RS04810;old_locus_tag=YPN_0896 NC_008149.1 Protein Homology CDS 1049172 1050296 . + 0 ID=cds919;Parent=gene961;Dbxref=Genbank:WP_002208672.1;Name=WP_002208672.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=WP_002208672.1;transl_table=11 NC_008149.1 RefSeq gene 1050408 1050743 . + . ID=gene962;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=YPN_RS04815;old_locus_tag=YPN_0897 NC_008149.1 Protein Homology CDS 1050408 1050743 . + 0 ID=cds920;Parent=gene962;Dbxref=Genbank:WP_002208671.1;Name=WP_002208671.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11 NC_008149.1 RefSeq gene 1050804 1052618 . + . ID=gene963;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=YPN_RS04820;old_locus_tag=YPN_0898 NC_008149.1 Protein Homology CDS 1050804 1052618 . + 0 ID=cds921;Parent=gene963;Dbxref=Genbank:WP_012413510.1;Name=WP_012413510.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_012413510.1;transl_table=11 NC_008149.1 RefSeq gene 1052629 1053597 . + . ID=gene964;Name=YPN_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04825;old_locus_tag=YPN_0899 NC_008149.1 Protein Homology CDS 1052629 1053597 . + 0 ID=cds922;Parent=gene964;Dbxref=Genbank:WP_002208669.1;Name=WP_002208669.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_002208669.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1053654 1055086 . + . ID=id101;gbkey=repeat_region NC_008149.1 RefSeq gene 1053804 1054262 . + . ID=gene965;Name=YPN_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04830;old_locus_tag=YPN_0900 NC_008149.1 Protein Homology CDS 1053804 1054262 . + 0 ID=cds923;Parent=gene965;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 1054352 1054525 . + . ID=gene966;Name=YPN_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04835 NC_008149.1 Protein Homology CDS 1054352 1054525 . + 0 ID=cds924;Parent=gene966;Dbxref=Genbank:WP_002216755.1;Name=WP_002216755.1;gbkey=CDS;product=invasin;protein_id=WP_002216755.1;transl_table=11 NC_008149.1 RefSeq gene 1054515 1054973 . + . ID=gene967;Name=YPN_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04840;old_locus_tag=YPN_0901 NC_008149.1 Protein Homology CDS 1054515 1054973 . + 0 ID=cds925;Parent=gene967;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1055271 1055966 . + . ID=gene968;Name=YPN_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04845;old_locus_tag=YPN_0902 NC_008149.1 Protein Homology CDS 1055271 1055966 . + 0 ID=cds926;Parent=gene968;Dbxref=Genbank:WP_002217139.1;Name=WP_002217139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217139.1;transl_table=11 NC_008149.1 RefSeq gene 1055999 1056592 . + . ID=gene969;Name=YPN_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04850;old_locus_tag=YPN_0903 NC_008149.1 Protein Homology CDS 1055999 1056592 . + 0 ID=cds927;Parent=gene969;Dbxref=Genbank:WP_002217141.1;Name=WP_002217141.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217141.1;transl_table=11 NC_008149.1 RefSeq gene 1056663 1057112 . + . ID=gene970;Name=YPN_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04855;old_locus_tag=YPN_0904 NC_008149.1 Protein Homology CDS 1056663 1057112 . + 0 ID=cds928;Parent=gene970;Dbxref=Genbank:WP_002208668.1;Name=WP_002208668.1;gbkey=CDS;product=NrdR family transcriptional regulator;protein_id=WP_002208668.1;transl_table=11 NC_008149.1 RefSeq gene 1057262 1058371 . + . ID=gene971;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=YPN_RS04860;old_locus_tag=YPN_0905 NC_008149.1 Protein Homology CDS 1057262 1058371 . + 0 ID=cds929;Parent=gene971;Dbxref=Genbank:WP_002208667.1;Name=WP_002208667.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=diaminohydroxyphosphoribosylaminopyrimidine deaminase;protein_id=WP_002208667.1;transl_table=11 NC_008149.1 RefSeq gene 1058507 1058977 . + . ID=gene972;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=YPN_RS04865;old_locus_tag=YPN_0906 NC_008149.1 Protein Homology CDS 1058507 1058977 . + 0 ID=cds930;Parent=gene972;Dbxref=Genbank:WP_002208666.1;Name=WP_002208666.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11 NC_008149.1 RefSeq gene 1058998 1059414 . + . ID=gene973;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=YPN_RS04870;old_locus_tag=YPN_0907 NC_008149.1 Protein Homology CDS 1058998 1059414 . + 0 ID=cds931;Parent=gene973;Dbxref=Genbank:WP_002208665.1;Name=WP_002208665.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=N utilization substance protein B homolog;protein_id=WP_002208665.1;transl_table=11 NC_008149.1 RefSeq gene 1059655 1060644 . + . ID=gene974;Name=YPN_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04875;old_locus_tag=YPN_0908 NC_008149.1 Protein Homology CDS 1059655 1060644 . + 0 ID=cds932;Parent=gene974;Dbxref=Genbank:WP_002208664.1;Name=WP_002208664.1;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=WP_002208664.1;transl_table=11 NC_008149.1 RefSeq gene 1060637 1061122 . + . ID=gene975;Name=YPN_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04880;old_locus_tag=YPN_0909 NC_008149.1 Protein Homology CDS 1060637 1061122 . + 0 ID=cds933;Parent=gene975;Dbxref=Genbank:WP_002208663.1;Name=WP_002208663.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=WP_002208663.1;transl_table=11 NC_008149.1 RefSeq gene 1061182 1061346 . + . ID=gene976;Name=YPN_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04885 NC_008149.1 Protein Homology CDS 1061182 1061346 . + 0 ID=cds934;Parent=gene976;Dbxref=Genbank:WP_002217353.1;Name=WP_002217353.1;gbkey=CDS;product=invasin;protein_id=WP_002217353.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1061184 1061906 . + . ID=id102;gbkey=repeat_region NC_008149.1 RefSeq gene 1061336 1061794 . + . ID=gene977;Name=YPN_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04890;old_locus_tag=YPN_0910 NC_008149.1 Protein Homology CDS 1061336 1061794 . + 0 ID=cds935;Parent=gene977;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 1061973 1063832 . - . ID=gene978;Name=YPN_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04895;old_locus_tag=YPN_0911 NC_008149.1 Protein Homology CDS 1061973 1063832 . - 0 ID=cds936;Parent=gene978;Dbxref=Genbank:WP_002208662.1;Name=WP_002208662.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_002208662.1;transl_table=11 NC_008149.1 RefSeq gene 1063988 1064908 . - . ID=gene979;Name=YPN_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04900;old_locus_tag=YPN_0912 NC_008149.1 Protein Homology CDS 1063988 1064908 . - 0 ID=cds937;Parent=gene979;Dbxref=Genbank:WP_002208661.1;Name=WP_002208661.1;gbkey=CDS;product=geranyltranstransferase;protein_id=WP_002208661.1;transl_table=11 NC_008149.1 RefSeq gene 1064913 1065167 . - . ID=gene980;Name=YPN_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04905;old_locus_tag=YPN_0913 NC_008149.1 Protein Homology CDS 1064913 1065167 . - 0 ID=cds938;Parent=gene980;Dbxref=Genbank:WP_002208660.1;Name=WP_002208660.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;product=exodeoxyribonuclease 7 small subunit;protein_id=WP_002208660.1;transl_table=11 NC_008149.1 RefSeq gene 1065249 1065419 . + . ID=gene981;Name=YPN_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04910;old_locus_tag=YPN_0914 NC_008149.1 Protein Homology CDS 1065249 1065419 . + 0 ID=cds939;Parent=gene981;Dbxref=Genbank:WP_002208659.1;Name=WP_002208659.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208659.1;transl_table=11 NC_008149.1 RefSeq gene 1065517 1066968 . + . ID=gene982;Name=YPN_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04915;old_locus_tag=YPN_0915 NC_008149.1 Protein Homology CDS 1065517 1066968 . + 0 ID=cds940;Parent=gene982;Dbxref=Genbank:WP_002208658.1;Name=WP_002208658.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;product=tRNA sulfurtransferase;protein_id=WP_002208658.1;transl_table=11 NC_008149.1 RefSeq gene 1067036 1067626 . - . ID=gene983;Name=YPN_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04920;old_locus_tag=YPN_0916 NC_008149.1 Protein Homology CDS 1067036 1067626 . - 0 ID=cds941;Parent=gene983;Dbxref=Genbank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;product=oxidative-stress-resistance chaperone;protein_id=WP_002208657.1;transl_table=11 NC_008149.1 RefSeq gene 1067589 1068500 . - . ID=gene984;Name=YPN_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04925;old_locus_tag=YPN_0917 NC_008149.1 Protein Homology CDS 1067589 1068500 . - 0 ID=cds942;Parent=gene984;Dbxref=Genbank:WP_002208656.1;Name=WP_002208656.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=WP_002208656.1;transl_table=11 NC_008149.1 RefSeq gene 1068732 1068953 . + . ID=gene985;Name=YPN_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04930;old_locus_tag=YPN_0918 NC_008149.1 Protein Homology CDS 1068732 1068953 . + 0 ID=cds943;Parent=gene985;Dbxref=Genbank:WP_002228340.1;Name=WP_002228340.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228340.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1068894 1070852 . + . ID=id103;gbkey=repeat_region NC_008149.1 RefSeq gene 1068963 1069742 . - . ID=gene986;Name=YPN_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04935;old_locus_tag=YPN_0919 NC_008149.1 Protein Homology CDS 1068963 1069742 . - 0 ID=cds944;Parent=gene986;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 1069742 1070764 . - . ID=gene987;Name=YPN_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04940;old_locus_tag=YPN_0920 NC_008149.1 Protein Homology CDS 1069742 1070764 . - 0 ID=cds945;Parent=gene987;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 1070850 1071182 . + . ID=gene988;Name=YPN_RS04945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS04945;old_locus_tag=YPN_0921;partial=true;pseudo=true;start_range=.,1070850 NC_008149.1 Protein Homology CDS 1070850 1071182 . + 0 ID=cds946;Parent=gene988;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleotide-binding protein;pseudo=true;start_range=.,1070850;transl_table=11 NC_008149.1 RefSeq gene 1071306 1072670 . - . ID=gene989;Name=YPN_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04950;old_locus_tag=YPN_0922 NC_008149.1 Protein Homology CDS 1071306 1072670 . - 0 ID=cds947;Parent=gene989;Dbxref=Genbank:WP_002216717.1;Name=WP_002216717.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216717.1;transl_table=11 NC_008149.1 RefSeq gene 1073154 1074041 . - . ID=gene990;Name=YPN_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04955;old_locus_tag=YPN_0923 NC_008149.1 Protein Homology CDS 1073154 1074041 . - 0 ID=cds948;Parent=gene990;Dbxref=Genbank:WP_002208653.1;Name=WP_002208653.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_002208653.1;transl_table=11 NC_008149.1 RefSeq gene 1074055 1074387 . - . ID=gene991;Name=YPN_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04960;old_locus_tag=YPN_0924 NC_008149.1 Protein Homology CDS 1074055 1074387 . - 0 ID=cds949;Parent=gene991;Dbxref=Genbank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208652.1;transl_table=11 NC_008149.1 RefSeq gene 1074387 1075001 . - . ID=gene992;Name=YPN_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04965;old_locus_tag=YPN_0925 NC_008149.1 Protein Homology CDS 1074387 1075001 . - 0 ID=cds950;Parent=gene992;Dbxref=Genbank:WP_002208651.1;Name=WP_002208651.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208651.1;transl_table=11 NC_008149.1 RefSeq gene 1074991 1076982 . - . ID=gene993;Name=YPN_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04970;old_locus_tag=YPN_0926 NC_008149.1 Protein Homology CDS 1074991 1076982 . - 0 ID=cds951;Parent=gene993;Dbxref=Genbank:WP_002208650.1;Name=WP_002208650.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit I;protein_id=WP_002208650.1;transl_table=11 NC_008149.1 RefSeq gene 1076987 1077943 . - . ID=gene994;Name=YPN_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04975;old_locus_tag=YPN_0927 NC_008149.1 Protein Homology CDS 1076987 1077943 . - 0 ID=cds952;Parent=gene994;Dbxref=Genbank:WP_002208649.1;Name=WP_002208649.1;gbkey=CDS;product=cytochrome O ubiquinol oxidase;protein_id=WP_002208649.1;transl_table=11 NC_008149.1 RefSeq gene 1078313 1079080 . - . ID=gene995;Name=YPN_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04980;old_locus_tag=YPN_0928 NC_008149.1 Protein Homology CDS 1078313 1079080 . - 0 ID=cds953;Parent=gene995;Dbxref=Genbank:WP_002208648.1;Name=WP_002208648.1;gbkey=CDS;product=ion channel protein Tsx;protein_id=WP_002208648.1;transl_table=11 NC_008149.1 RefSeq gene 1079372 1080850 . - . ID=gene996;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=YPN_RS04985;old_locus_tag=YPN_0929 NC_008149.1 Protein Homology CDS 1079372 1080850 . - 0 ID=cds954;Parent=gene996;Dbxref=Genbank:WP_002223277.1;Name=WP_002223277.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=AmpG family muropeptide MFS transporter;protein_id=WP_002223277.1;transl_table=11 NC_008149.1 RefSeq gene 1080968 1081546 . - . ID=gene997;Name=YPN_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04990;old_locus_tag=YPN_0930 NC_008149.1 Protein Homology CDS 1080968 1081546 . - 0 ID=cds955;Parent=gene997;Dbxref=Genbank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208646.1;transl_table=11 NC_008149.1 RefSeq gene 1081901 1082215 . + . ID=gene998;Name=YPN_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS04995;old_locus_tag=YPN_0931 NC_008149.1 Protein Homology CDS 1081901 1082215 . + 0 ID=cds956;Parent=gene998;Dbxref=Genbank:WP_002354680.1;Name=WP_002354680.1;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;gbkey=CDS;product=BolA family transcriptional regulator;protein_id=WP_002354680.1;transl_table=11 NC_008149.1 RefSeq gene 1082374 1082559 . + . ID=gene999;Name=YPN_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05000 NC_008149.1 Protein Homology CDS 1082374 1082559 . + 0 ID=cds957;Parent=gene999;Dbxref=Genbank:WP_012304506.1;Name=WP_012304506.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012304506.1;transl_table=11 NC_008149.1 RefSeq gene 1082632 1083936 . + . ID=gene1000;Name=YPN_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05005;old_locus_tag=YPN_0932 NC_008149.1 Protein Homology CDS 1082632 1083936 . + 0 ID=cds958;Parent=gene1000;Dbxref=Genbank:WP_002208643.1;Name=WP_002208643.1;gbkey=CDS;product=trigger factor;protein_id=WP_002208643.1;transl_table=11 NC_008149.1 RefSeq gene 1084398 1085021 . + . ID=gene1001;Name=YPN_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05010;old_locus_tag=YPN_0933 NC_008149.1 Protein Homology CDS 1084398 1085021 . + 0 ID=cds959;Parent=gene1001;Dbxref=Genbank:WP_002208642.1;Name=WP_002208642.1;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_002208642.1;transl_table=11 NC_008149.1 RefSeq gene 1085227 1086498 . + . ID=gene1002;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=YPN_RS05015;old_locus_tag=YPN_0934 NC_008149.1 Protein Homology CDS 1085227 1086498 . + 0 ID=cds960;Parent=gene1002;Dbxref=Genbank:WP_002208641.1;Name=WP_002208641.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11 NC_008149.1 RefSeq gene 1086693 1089047 . + . ID=gene1003;Name=YPN_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05020;old_locus_tag=YPN_0935 NC_008149.1 Protein Homology CDS 1086693 1089047 . + 0 ID=cds961;Parent=gene1003;Dbxref=Genbank:WP_002208640.1;Name=WP_002208640.1;gbkey=CDS;product=peptidase;protein_id=WP_002208640.1;transl_table=11 NC_008149.1 RefSeq gene 1089265 1089537 . + . ID=gene1004;Name=YPN_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05025;old_locus_tag=YPN_0936 NC_008149.1 Protein Homology CDS 1089265 1089537 . + 0 ID=cds962;Parent=gene1004;Dbxref=Genbank:WP_002208639.1;Name=WP_002208639.1;Note=histone-like DNA-binding protein;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208639.1;transl_table=11 NC_008149.1 RefSeq gene 1089838 1091724 . + . ID=gene1005;Name=YPN_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05030;old_locus_tag=YPN_0937 NC_008149.1 Protein Homology CDS 1089838 1091724 . + 0 ID=cds963;Parent=gene1005;Dbxref=Genbank:WP_002208638.1;Name=WP_002208638.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208638.1;transl_table=11 NC_008149.1 RefSeq gene 1091864 1092310 . + . ID=gene1006;Name=YPN_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05035;old_locus_tag=YPN_0938 NC_008149.1 Protein Homology CDS 1091864 1092310 . + 0 ID=cds964;Parent=gene1006;Dbxref=Genbank:WP_002208637.1;Name=WP_002208637.1;gbkey=CDS;product=transporter;protein_id=WP_002208637.1;transl_table=11 NC_008149.1 RefSeq gene 1092664 1093071 . + . ID=gene1007;Name=YPN_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05040;old_locus_tag=YPN_0939 NC_008149.1 Protein Homology CDS 1092664 1093071 . + 0 ID=cds965;Parent=gene1007;Dbxref=Genbank:WP_002208636.1;Name=WP_002208636.1;gbkey=CDS;product=thioesterase;protein_id=WP_002208636.1;transl_table=11 NC_008149.1 RefSeq gene 1093157 1093855 . - . ID=gene1008;Name=YPN_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05045;old_locus_tag=YPN_0940 NC_008149.1 Protein Homology CDS 1093157 1093855 . - 0 ID=cds966;Parent=gene1008;Dbxref=Genbank:WP_002208635.1;Name=WP_002208635.1;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;gbkey=CDS;product=7-cyano-7-deazaguanine synthase;protein_id=WP_002208635.1;transl_table=11 NC_008149.1 RefSeq gene 1094120 1095823 . - . ID=gene1009;Name=YPN_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05050;old_locus_tag=YPN_0941 NC_008149.1 Protein Homology CDS 1094120 1095823 . - 0 ID=cds967;Parent=gene1009;Dbxref=Genbank:WP_002208633.1;Name=WP_002208633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208633.1;transl_table=11 NC_008149.1 RefSeq gene 1095928 1096749 . + . ID=gene1010;Name=YPN_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05055;old_locus_tag=YPN_0942 NC_008149.1 Protein Homology CDS 1095928 1096749 . + 0 ID=cds968;Parent=gene1010;Dbxref=Genbank:WP_002208632.1;Name=WP_002208632.1;Note=HMP-PP phosphatase%3B catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P);gbkey=CDS;product=HMP-PP phosphatase;protein_id=WP_002208632.1;transl_table=11 NC_008149.1 RefSeq gene 1096961 1098001 . - . ID=gene1011;Name=YPN_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05060;old_locus_tag=YPN_0943 NC_008149.1 Protein Homology CDS 1096961 1098001 . - 0 ID=cds969;Parent=gene1011;Dbxref=Genbank:WP_002208631.1;Name=WP_002208631.1;gbkey=CDS;product=cysteine synthase;protein_id=WP_002208631.1;transl_table=11 NC_008149.1 RefSeq gene 1098127 1098588 . + . ID=gene1012;Name=YPN_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05065;old_locus_tag=YPN_0944 NC_008149.1 Protein Homology CDS 1098127 1098588 . + 0 ID=cds970;Parent=gene1012;Dbxref=Genbank:WP_002208630.1;Name=WP_002208630.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11 NC_008149.1 RefSeq gene 1098690 1100456 . + . ID=gene1013;Name=YPN_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05070;old_locus_tag=YPN_0945 NC_008149.1 Protein Homology CDS 1098690 1100456 . + 0 ID=cds971;Parent=gene1013;Dbxref=Genbank:WP_002208629.1;Name=WP_002208629.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208629.1;transl_table=11 NC_008149.1 RefSeq gene 1100449 1102272 . + . ID=gene1014;Name=YPN_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05075;old_locus_tag=YPN_0946 NC_008149.1 Protein Homology CDS 1100449 1102272 . + 0 ID=cds972;Parent=gene1014;Dbxref=Genbank:WP_002208628.1;Name=WP_002208628.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002208628.1;transl_table=11 NC_008149.1 RefSeq gene 1102682 1103020 . + . ID=gene1015;Name=YPN_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05080;old_locus_tag=YPN_0947 NC_008149.1 Protein Homology CDS 1102682 1103020 . + 0 ID=cds973;Parent=gene1015;Dbxref=Genbank:WP_002208627.1;Name=WP_002208627.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II 2;protein_id=WP_002208627.1;transl_table=11 NC_008149.1 RefSeq gene 1103060 1104349 . + . ID=gene1016;Name=YPN_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05085;old_locus_tag=YPN_0948 NC_008149.1 Protein Homology CDS 1103060 1104349 . + 0 ID=cds974;Parent=gene1016;Dbxref=Genbank:WP_002228344.1;Name=WP_002228344.1;gbkey=CDS;product=ammonium transporter;protein_id=WP_002228344.1;transl_table=11 NC_008149.1 RefSeq gene 1104609 1105469 . - . ID=gene1017;Name=YPN_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05090;old_locus_tag=YPN_0949 NC_008149.1 Protein Homology CDS 1104609 1105469 . - 0 ID=cds975;Parent=gene1017;Dbxref=Genbank:WP_002208625.1;Name=WP_002208625.1;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=WP_002208625.1;transl_table=11 NC_008149.1 RefSeq gene 1105726 1106247 . + . ID=gene1018;Name=YPN_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05095;old_locus_tag=YPN_0950 NC_008149.1 Protein Homology CDS 1105726 1106247 . + 0 ID=cds976;Parent=gene1018;Dbxref=Genbank:WP_002208624.1;Name=WP_002208624.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002208624.1;transl_table=11 NC_008149.1 RefSeq gene 1106383 1106772 . - . ID=gene1019;Name=YPN_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05100;old_locus_tag=YPN_0951 NC_008149.1 Protein Homology CDS 1106383 1106772 . - 0 ID=cds977;Parent=gene1019;Dbxref=Genbank:WP_002208623.1;Name=WP_002208623.1;gbkey=CDS;product=6-O-methylguanine DNA methyltransferase;protein_id=WP_002208623.1;transl_table=11 NC_008149.1 RefSeq gene 1107660 1107863 . - . ID=gene1020;Name=YPN_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05105;old_locus_tag=YPN_0952 NC_008149.1 Protein Homology CDS 1107660 1107863 . - 0 ID=cds978;Parent=gene1020;Dbxref=Genbank:WP_002208622.1;Name=WP_002208622.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;product=modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11 NC_008149.1 RefSeq gene 1107912 1108280 . - . ID=gene1021;Name=YPN_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05110;old_locus_tag=YPN_0953 NC_008149.1 Protein Homology CDS 1107912 1108280 . - 0 ID=cds979;Parent=gene1021;Dbxref=Genbank:WP_002218472.1;Name=WP_002218472.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218472.1;transl_table=11 NC_008149.1 RefSeq gene 1108439 1108792 . - . ID=gene1022;Name=YPN_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05115;old_locus_tag=YPN_0954 NC_008149.1 Protein Homology CDS 1108439 1108792 . - 0 ID=cds980;Parent=gene1022;Dbxref=Genbank:WP_002208619.1;Name=WP_002208619.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208619.1;transl_table=11 NC_008149.1 RefSeq gene 1109666 1109809 . - . ID=gene1023;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=YPN_RS05120;old_locus_tag=YPN_0955 NC_008149.1 Protein Homology CDS 1109666 1109809 . - 0 ID=cds981;Parent=gene1023;Dbxref=Genbank:WP_002208618.1;Name=WP_002208618.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=WP_002208618.1;transl_table=11 NC_008149.1 RefSeq gene 1109825 1110085 . - . ID=gene1024;Name=YPN_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05125;old_locus_tag=YPN_0956 NC_008149.1 Protein Homology CDS 1109825 1110085 . - 0 ID=cds982;Parent=gene1024;Dbxref=Genbank:WP_002208617.1;Name=WP_002208617.1;gbkey=CDS;product=50S ribosomal protein L31 type B;protein_id=WP_002208617.1;transl_table=11 NC_008149.1 RefSeq gene 1110271 1113423 . - . ID=gene1025;Name=YPN_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05130;old_locus_tag=YPN_0957 NC_008149.1 Protein Homology CDS 1110271 1113423 . - 0 ID=cds983;Parent=gene1025;Dbxref=Genbank:WP_002208616.1;Name=WP_002208616.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002208616.1;transl_table=11 NC_008149.1 RefSeq gene 1113440 1114627 . - . ID=gene1026;Name=YPN_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05135;old_locus_tag=YPN_0958 NC_008149.1 Protein Homology CDS 1113440 1114627 . - 0 ID=cds984;Parent=gene1026;Dbxref=Genbank:WP_002208615.1;Name=WP_002208615.1;Note=with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics;gbkey=CDS;product=multidrug transporter;protein_id=WP_002208615.1;transl_table=11 NC_008149.1 RefSeq gene 1114772 1115428 . + . ID=gene1027;Name=YPN_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05140;old_locus_tag=YPN_0959 NC_008149.1 Protein Homology CDS 1114772 1115428 . + 0 ID=cds985;Parent=gene1027;Dbxref=Genbank:WP_002208614.1;Name=WP_002208614.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208614.1;transl_table=11 NC_008149.1 RefSeq gene 1115441 1115794 . + . ID=gene1028;Name=YPN_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05145;old_locus_tag=YPN_0960 NC_008149.1 Protein Homology CDS 1115441 1115794 . + 0 ID=cds986;Parent=gene1028;Dbxref=Genbank:WP_002208613.1;Name=WP_002208613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208613.1;transl_table=11 NC_008149.1 RefSeq gene 1116090 1119452 . + . ID=gene1029;Name=YPN_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05150;old_locus_tag=YPN_0961 NC_008149.1 Protein Homology CDS 1116090 1119452 . + 0 ID=cds987;Parent=gene1029;Dbxref=Genbank:WP_002208612.1;Name=WP_002208612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208612.1;transl_table=11 NC_008149.1 RefSeq gene 1119792 1119947 . - . ID=gene1030;Name=YPN_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05155;old_locus_tag=YPN_0962 NC_008149.1 Protein Homology CDS 1119792 1119947 . - 0 ID=cds988;Parent=gene1030;Dbxref=Genbank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208611.1;transl_table=11 NC_008149.1 RefSeq gene 1120118 1120654 . - . ID=gene1031;Name=YPN_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05160;old_locus_tag=YPN_0963 NC_008149.1 Protein Homology CDS 1120118 1120654 . - 0 ID=cds989;Parent=gene1031;Dbxref=Genbank:WP_002208610.1;Name=WP_002208610.1;gbkey=CDS;product=prephenate dehydrogenase;protein_id=WP_002208610.1;transl_table=11 NC_008149.1 RefSeq gene 1120853 1121041 . - . ID=gene1032;Name=YPN_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05165 NC_008149.1 Protein Homology CDS 1120853 1121041 . - 0 ID=cds990;Parent=gene1032;Dbxref=Genbank:WP_002208609.1;Name=WP_002208609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208609.1;transl_table=11 NC_008149.1 RefSeq gene 1121474 1122037 . + . ID=gene1033;Name=YPN_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05170;old_locus_tag=YPN_0965 NC_008149.1 Protein Homology CDS 1121474 1122037 . + 0 ID=cds991;Parent=gene1033;Dbxref=Genbank:WP_002208606.1;Name=WP_002208606.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_002208606.1;transl_table=11 NC_008149.1 RefSeq gene 1122693 1124669 . + . ID=gene1034;Name=YPN_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05175;old_locus_tag=YPN_0966 NC_008149.1 Protein Homology CDS 1122693 1124669 . + 0 ID=cds992;Parent=gene1034;Dbxref=Genbank:WP_002208605.1;Name=WP_002208605.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit gamma/tau;protein_id=WP_002208605.1;transl_table=11 NC_008149.1 RefSeq gene 1124725 1125057 . + . ID=gene1035;Name=YPN_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05180;old_locus_tag=YPN_0967 NC_008149.1 Protein Homology CDS 1124725 1125057 . + 0 ID=cds993;Parent=gene1035;Dbxref=Genbank:WP_002208604.1;Name=WP_002208604.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208604.1;transl_table=11 NC_008149.1 RefSeq gene 1125057 1125662 . + . ID=gene1036;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=YPN_RS05185;old_locus_tag=YPN_0968 NC_008149.1 Protein Homology CDS 1125057 1125662 . + 0 ID=cds994;Parent=gene1036;Dbxref=Genbank:WP_002208603.1;Name=WP_002208603.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=WP_002208603.1;transl_table=11 NC_008149.1 RefSeq gene 1125854 1127728 . + . ID=gene1037;Name=YPN_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05190;old_locus_tag=YPN_0970 NC_008149.1 Protein Homology CDS 1125854 1127728 . + 0 ID=cds995;Parent=gene1037;Dbxref=Genbank:WP_002208601.1;Name=WP_002208601.1;Note=molecular chaperone;gbkey=CDS;product=chaperone protein HtpG;protein_id=WP_002208601.1;transl_table=11 NC_008149.1 RefSeq gene 1127955 1128599 . + . ID=gene1038;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=YPN_RS05195;old_locus_tag=YPN_0971 NC_008149.1 Protein Homology CDS 1127955 1128599 . + 0 ID=cds996;Parent=gene1038;Dbxref=Genbank:WP_002208600.1;Name=WP_002208600.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11 NC_008149.1 RefSeq gene 1128689 1129651 . + . ID=gene1039;Name=YPN_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05200;old_locus_tag=YPN_0972 NC_008149.1 Protein Homology CDS 1128689 1129651 . + 0 ID=cds997;Parent=gene1039;Dbxref=Genbank:WP_002208599.1;Name=WP_002208599.1;gbkey=CDS;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11 NC_008149.1 RefSeq gene 1130249 1131238 . + . ID=gene1040;Name=YPN_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05205;old_locus_tag=YPN_0973 NC_008149.1 Protein Homology CDS 1130249 1131238 . + 0 ID=cds998;Parent=gene1040;Dbxref=Genbank:WP_002208598.1;Name=WP_002208598.1;gbkey=CDS;product=CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase;protein_id=WP_002208598.1;transl_table=11 NC_008149.1 RefSeq gene 1131276 1132049 . + . ID=gene1041;Name=YPN_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05210;old_locus_tag=YPN_0974 NC_008149.1 Protein Homology CDS 1131276 1132049 . + 0 ID=cds999;Parent=gene1041;Dbxref=Genbank:WP_002208597.1;Name=WP_002208597.1;gbkey=CDS;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11 NC_008149.1 RefSeq gene 1132054 1132197 . + . ID=gene1042;Name=YPN_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05215;old_locus_tag=YPN_0975 NC_008149.1 Protein Homology CDS 1132054 1132197 . + 0 ID=cds1000;Parent=gene1042;Dbxref=Genbank:WP_002215986.1;Name=WP_002215986.1;gbkey=CDS;product=CDP-glycerol glycerophosphotransferase;protein_id=WP_002215986.1;transl_table=11 NC_008149.1 RefSeq gene 1132229 1133128 . + . ID=gene1043;Name=YPN_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05220;old_locus_tag=YPN_0976 NC_008149.1 Protein Homology CDS 1132229 1133128 . + 0 ID=cds1001;Parent=gene1043;Dbxref=Genbank:WP_002354671.1;Name=WP_002354671.1;gbkey=CDS;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_002354671.1;transl_table=11 NC_008149.1 RefSeq gene 1133146 1134459 . + . ID=gene1044;Name=YPN_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05225;old_locus_tag=YPN_0977 NC_008149.1 Protein Homology CDS 1133146 1134459 . + 0 ID=cds1002;Parent=gene1044;Dbxref=Genbank:WP_002208596.1;Name=WP_002208596.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208596.1;transl_table=11 NC_008149.1 RefSeq gene 1134496 1135353 . + . ID=gene1045;Name=YPN_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05230;old_locus_tag=YPN_0978 NC_008149.1 Protein Homology CDS 1134496 1135353 . + 0 ID=cds1003;Parent=gene1045;Dbxref=Genbank:WP_002208595.1;Name=WP_002208595.1;gbkey=CDS;product=paratose synthase;protein_id=WP_002208595.1;transl_table=11 NC_008149.1 RefSeq gene 1135354 1136637 . + . ID=gene1046;Name=YPN_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05235;old_locus_tag=YPN_0979 NC_008149.1 Protein Homology CDS 1135354 1136637 . + 0 ID=cds1004;Parent=gene1046;Dbxref=Genbank:WP_002208594.1;Name=WP_002208594.1;gbkey=CDS;product=O-antigen synthesis protein WbyH;protein_id=WP_002208594.1;transl_table=11 NC_008149.1 RefSeq gene 1136711 1138054 . + . ID=gene1047;Name=YPN_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05240;old_locus_tag=YPN_0980 NC_008149.1 Protein Homology CDS 1136711 1138054 . + 0 ID=cds1005;Parent=gene1047;Dbxref=Genbank:WP_002208593.1;Name=WP_002208593.1;gbkey=CDS;product=O-unit flippase Wzx;protein_id=WP_002208593.1;transl_table=11 NC_008149.1 RefSeq gene 1138065 1138778 . + . ID=gene1048;Name=YPN_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05245;old_locus_tag=YPN_0981 NC_008149.1 Protein Homology CDS 1138065 1138778 . + 0 ID=cds1006;Parent=gene1048;Dbxref=Genbank:WP_002215988.1;Name=WP_002215988.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002215988.1;transl_table=11 NC_008149.1 RefSeq gene 1139158 1140300 . + . ID=gene1049;Name=YPN_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05250;old_locus_tag=YPN_0982 NC_008149.1 Protein Homology CDS 1139158 1140300 . + 0 ID=cds1007;Parent=gene1049;Dbxref=Genbank:WP_002228348.1;Name=WP_002228348.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002228348.1;transl_table=11 NC_008149.1 RefSeq gene 1140622 1141518 . + . ID=gene1050;Name=YPN_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05255;old_locus_tag=YPN_0983 NC_008149.1 Protein Homology CDS 1140622 1141518 . + 0 ID=cds1008;Parent=gene1050;Dbxref=Genbank:WP_002354669.1;Name=WP_002354669.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002354669.1;transl_table=11 NC_008149.1 RefSeq gene 1141767 1142780 . + . ID=gene1051;Name=YPN_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05260;old_locus_tag=YPN_0984 NC_008149.1 Protein Homology CDS 1141767 1142780 . + 0 ID=cds1009;Parent=gene1051;Dbxref=Genbank:WP_002208591.1;Name=WP_002208591.1;gbkey=CDS;product=mannosyltransferase;protein_id=WP_002208591.1;transl_table=11 NC_008149.1 RefSeq gene 1142796 1143918 . + . ID=gene1052;Name=YPN_RS05265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS05265;pseudo=true NC_008149.1 Protein Homology CDS 1142796 1143918 . + 0 ID=cds1010;Parent=gene1052;Note=catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 1143924 1144889 . + . ID=gene1053;Name=YPN_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05270;old_locus_tag=YPN_0987 NC_008149.1 Protein Homology CDS 1143924 1144889 . + 0 ID=cds1011;Parent=gene1053;Dbxref=Genbank:WP_002223297.1;Name=WP_002223297.1;Note=bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase%3Bcatalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose;gbkey=CDS;product=GDP-fucose synthetase;protein_id=WP_002223297.1;transl_table=11 NC_008149.1 RefSeq gene 1145076 1146482 . + . ID=gene1054;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=YPN_RS05275;old_locus_tag=YPN_0988 NC_008149.1 Protein Homology CDS 1145076 1146482 . + 0 ID=cds1012;Parent=gene1054;Dbxref=Genbank:WP_002208590.1;Name=WP_002208590.1;Note=capsular polysaccharide colanic acid biosynthesis protein%3B catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate;gbkey=CDS;gene=cpsB;product=mannose-1-phosphate guanyltransferase;protein_id=WP_002208590.1;transl_table=11 NC_008149.1 RefSeq gene 1146485 1147228 . + . ID=gene1055;Name=YPN_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05280;old_locus_tag=YPN_0989 NC_008149.1 Protein Homology CDS 1146485 1147228 . + 0 ID=cds1013;Parent=gene1055;Dbxref=Genbank:WP_002208589.1;Name=WP_002208589.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002208589.1;transl_table=11 NC_008149.1 RefSeq gene 1147233 1148606 . + . ID=gene1056;Name=YPN_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05285;old_locus_tag=YPN_0990 NC_008149.1 Protein Homology CDS 1147233 1148606 . + 0 ID=cds1014;Parent=gene1056;Dbxref=Genbank:WP_002208588.1;Name=WP_002208588.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002208588.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1148705 1150024 . + . ID=id104;gbkey=repeat_region NC_008149.1 RefSeq gene 1148742 1149951 . - . ID=gene1057;Name=YPN_RS05290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS05290;pseudo=true NC_008149.1 Protein Homology CDS 1148742 1149951 . - 0 ID=cds1015;Parent=gene1057;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 1149984 1151129 . + . ID=gene1058;Name=YPN_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05295;old_locus_tag=YPN_0993 NC_008149.1 Protein Homology CDS 1149984 1151129 . + 0 ID=cds1016;Parent=gene1058;Dbxref=Genbank:WP_025470988.1;Name=WP_025470988.1;gbkey=CDS;product=chain-length determining protein;protein_id=WP_025470988.1;transl_table=11 NC_008149.1 RefSeq gene 1151333 1152637 . + . ID=gene1059;Name=YPN_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05300;old_locus_tag=YPN_0994 NC_008149.1 Protein Homology CDS 1151333 1152637 . + 0 ID=cds1017;Parent=gene1059;Dbxref=Genbank:WP_002208586.1;Name=WP_002208586.1;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP;gbkey=CDS;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11 NC_008149.1 RefSeq gene 1152734 1154425 . - . ID=gene1060;Name=YPN_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05305;old_locus_tag=YPN_0995 NC_008149.1 Protein Homology CDS 1152734 1154425 . - 0 ID=cds1018;Parent=gene1060;Dbxref=Genbank:WP_002208585.1;Name=WP_002208585.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;product=cation:proton antiport protein;protein_id=WP_002208585.1;transl_table=11 NC_008149.1 RefSeq gene 1154660 1155874 . - . ID=gene1061;Name=YPN_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05310;old_locus_tag=YPN_0996 NC_008149.1 Protein Homology CDS 1154660 1155874 . - 0 ID=cds1019;Parent=gene1061;Dbxref=Genbank:WP_002208584.1;Name=WP_002208584.1;gbkey=CDS;product=fosmidomycin resistance protein;protein_id=WP_002208584.1;transl_table=11 NC_008149.1 RefSeq gene 1156156 1156413 . + . ID=gene1062;Name=YPN_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05315;old_locus_tag=YPN_0997 NC_008149.1 GeneMarkS+ CDS 1156156 1156413 . + 0 ID=cds1020;Parent=gene1062;Dbxref=Genbank:WP_002215363.1;Name=WP_002215363.1;gbkey=CDS;product=protein ushA;protein_id=WP_002215363.1;transl_table=11 NC_008149.1 RefSeq gene 1156403 1157194 . + . ID=gene1063;Name=YPN_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05320;old_locus_tag=YPN_0998 NC_008149.1 Protein Homology CDS 1156403 1157194 . + 0 ID=cds1021;Parent=gene1063;Dbxref=Genbank:WP_002232230.1;Name=WP_002232230.1;gbkey=CDS;product=metallophosphatase;protein_id=WP_002232230.1;transl_table=11 NC_008149.1 RefSeq gene 1157188 1157811 . + . ID=gene1064;Name=YPN_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05325;old_locus_tag=YPN_0999 NC_008149.1 Protein Homology CDS 1157188 1157811 . + 0 ID=cds1022;Parent=gene1064;Dbxref=Genbank:WP_002228353.1;Name=WP_002228353.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002228353.1;transl_table=11 NC_008149.1 RefSeq gene 1157915 1158154 . - . ID=gene1065;Name=YPN_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05330;old_locus_tag=YPN_1000 NC_008149.1 Protein Homology CDS 1157915 1158154 . - 0 ID=cds1023;Parent=gene1065;Dbxref=Genbank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11 NC_008149.1 RefSeq gene 1158168 1158425 . - . ID=gene1066;Name=YPN_RS05335;gbkey=Gene;gene_biotype=other;locus_tag=YPN_RS05335 NC_008149.1 RefSeq repeat_region 1158241 1158410 . + . ID=id105;gbkey=repeat_region NC_008149.1 RefSeq gene 1158491 1158970 . - . ID=gene1067;Name=YPN_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05340;old_locus_tag=YPN_1001 NC_008149.1 Protein Homology CDS 1158491 1158970 . - 0 ID=cds1024;Parent=gene1067;Dbxref=Genbank:WP_002208581.1;Name=WP_002208581.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208581.1;transl_table=11 NC_008149.1 RefSeq gene 1159234 1160043 . - . ID=gene1068;Name=YPN_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05345;old_locus_tag=YPN_1002 NC_008149.1 Protein Homology CDS 1159234 1160043 . - 0 ID=cds1025;Parent=gene1068;Dbxref=Genbank:WP_002208580.1;Name=WP_002208580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208580.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1160083 1160493 . + . ID=id106;gbkey=repeat_region NC_008149.1 RefSeq gene 1160564 1163449 . - . ID=gene1069;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=YPN_RS05350;old_locus_tag=YPN_1003 NC_008149.1 Protein Homology CDS 1160564 1163449 . - 0 ID=cds1026;Parent=gene1069;Dbxref=Genbank:WP_002223301.1;Name=WP_002223301.1;gbkey=CDS;gene=copA;product=copper exporting ATPase;protein_id=WP_002223301.1;transl_table=11 NC_008149.1 RefSeq gene 1163656 1164075 . + . ID=gene1070;Name=YPN_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05355;old_locus_tag=YPN_1004 NC_008149.1 Protein Homology CDS 1163656 1164075 . + 0 ID=cds1027;Parent=gene1070;Dbxref=Genbank:WP_002208578.1;Name=WP_002208578.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208578.1;transl_table=11 NC_008149.1 RefSeq gene 1164184 1164633 . - . ID=gene1071;Name=YPN_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05360;old_locus_tag=YPN_1005 NC_008149.1 Protein Homology CDS 1164184 1164633 . - 0 ID=cds1028;Parent=gene1071;Dbxref=Genbank:WP_002208577.1;Name=WP_002208577.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208577.1;transl_table=11 NC_008149.1 RefSeq gene 1164636 1165550 . - . ID=gene1072;Name=YPN_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05365;old_locus_tag=YPN_1006 NC_008149.1 Protein Homology CDS 1164636 1165550 . - 0 ID=cds1029;Parent=gene1072;Dbxref=Genbank:WP_002208576.1;Name=WP_002208576.1;gbkey=CDS;product=protease;protein_id=WP_002208576.1;transl_table=11 NC_008149.1 RefSeq gene 1165745 1166614 . - . ID=gene1073;Name=YPN_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05370;old_locus_tag=YPN_1007 NC_008149.1 Protein Homology CDS 1165745 1166614 . - 0 ID=cds1030;Parent=gene1073;Dbxref=Genbank:WP_002208575.1;Name=WP_002208575.1;gbkey=CDS;product=thioredoxin;protein_id=WP_002208575.1;transl_table=11 NC_008149.1 RefSeq gene 1166691 1167467 . - . ID=gene1074;Name=YPN_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05375;old_locus_tag=YPN_1008 NC_008149.1 Protein Homology CDS 1166691 1167467 . - 0 ID=cds1031;Parent=gene1074;Dbxref=Genbank:WP_002208574.1;Name=WP_002208574.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002208574.1;transl_table=11 NC_008149.1 RefSeq gene 1167854 1168489 . - . ID=gene1075;Name=YPN_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05380;old_locus_tag=YPN_1009 NC_008149.1 Protein Homology CDS 1167854 1168489 . - 0 ID=cds1032;Parent=gene1075;Dbxref=Genbank:WP_002208573.1;Name=WP_002208573.1;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11 NC_008149.1 RefSeq gene 1168460 1169146 . + . ID=gene1076;Name=YPN_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05385;old_locus_tag=YPN_1010 NC_008149.1 Protein Homology CDS 1168460 1169146 . + 0 ID=cds1033;Parent=gene1076;Dbxref=Genbank:WP_002208572.1;Name=WP_002208572.1;gbkey=CDS;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002208572.1;transl_table=11 NC_008149.1 RefSeq gene 1169143 1171572 . + . ID=gene1077;Name=YPN_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05390;old_locus_tag=YPN_1011 NC_008149.1 Protein Homology CDS 1169143 1171572 . + 0 ID=cds1034;Parent=gene1077;Dbxref=Genbank:WP_002208571.1;Name=WP_002208571.1;gbkey=CDS;product=permease;protein_id=WP_002208571.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1171612 1172329 . + . ID=id107;gbkey=repeat_region NC_008149.1 RefSeq gene 1171758 1172216 . + . ID=gene1078;Name=YPN_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05395;old_locus_tag=YPN_1012 NC_008149.1 Protein Homology CDS 1171758 1172216 . + 0 ID=cds1035;Parent=gene1078;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1172326 1173390 . - . ID=gene1079;Name=YPN_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05400;old_locus_tag=YPN_1013 NC_008149.1 Protein Homology CDS 1172326 1173390 . - 0 ID=cds1036;Parent=gene1079;Dbxref=Genbank:WP_002208570.1;Name=WP_002208570.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_002208570.1;transl_table=11 NC_008149.1 RefSeq gene 1173387 1173911 . - . ID=gene1080;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=YPN_RS05405;old_locus_tag=YPN_1014 NC_008149.1 Protein Homology CDS 1173387 1173911 . - 0 ID=cds1037;Parent=gene1080;Dbxref=Genbank:WP_002208569.1;Name=WP_002208569.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_002208569.1;transl_table=11 NC_008149.1 RefSeq gene 1174207 1174929 . - . ID=gene1081;Name=YPN_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05410;old_locus_tag=YPN_1015 NC_008149.1 Protein Homology CDS 1174207 1174929 . - 0 ID=cds1038;Parent=gene1081;Dbxref=Genbank:WP_002208568.1;Name=WP_002208568.1;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=WP_002208568.1;transl_table=11 NC_008149.1 RefSeq gene 1174940 1175434 . - . ID=gene1082;Name=YPN_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05415;old_locus_tag=YPN_1016 NC_008149.1 Protein Homology CDS 1174940 1175434 . - 0 ID=cds1039;Parent=gene1082;Dbxref=Genbank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208567.1;transl_table=11 NC_008149.1 RefSeq gene 1175645 1177030 . + . ID=gene1083;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=YPN_RS05420;old_locus_tag=YPN_1017 NC_008149.1 Protein Homology CDS 1175645 1177030 . + 0 ID=cds1040;Parent=gene1083;Dbxref=Genbank:WP_002222677.1;Name=WP_002222677.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;protein_id=WP_002222677.1;transl_table=11 NC_008149.1 RefSeq gene 1177157 1177387 . + . ID=gene1084;Name=YPN_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05425 NC_008149.1 Protein Homology CDS 1177157 1177387 . + 0 ID=cds1041;Parent=gene1084;Dbxref=Genbank:WP_002430127.1;Name=WP_002430127.1;gbkey=CDS;product=invasin;protein_id=WP_002430127.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1177226 1177946 . + . ID=id108;gbkey=repeat_region NC_008149.1 RefSeq gene 1177377 1177835 . + . ID=gene1085;Name=YPN_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05430;old_locus_tag=YPN_1018 NC_008149.1 Protein Homology CDS 1177377 1177835 . + 0 ID=cds1042;Parent=gene1085;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1177982 1178194 . - . ID=gene1086;Name=YPN_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05435;old_locus_tag=YPN_1019 NC_008149.1 Protein Homology CDS 1177982 1178194 . - 0 ID=cds1043;Parent=gene1086;Dbxref=Genbank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;product=ribosome-associated protein;protein_id=WP_002209775.1;transl_table=11 NC_008149.1 RefSeq gene 1178209 1179075 . - . ID=gene1087;Name=YPN_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05440;old_locus_tag=YPN_1020 NC_008149.1 Protein Homology CDS 1178209 1179075 . - 0 ID=cds1044;Parent=gene1087;Dbxref=Genbank:WP_002209774.1;Name=WP_002209774.1;gbkey=CDS;product=bifunctional protein FolD;protein_id=WP_002209774.1;transl_table=11 NC_008149.1 RefSeq gene 1179290 1179366 . + . ID=gene1088;Name=YPN_RS05445;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS05445;old_locus_tag=YPN_r047 NC_008149.1 tRNAscan-SE tRNA 1179290 1179366 . + . ID=rna41;Parent=gene1088;anticodon=(pos:1179324..1179326);gbkey=tRNA;product=tRNA-Arg NC_008149.1 tRNAscan-SE exon 1179290 1179366 . + . ID=id109;Parent=rna41;anticodon=(pos:1179324..1179326);gbkey=tRNA;product=tRNA-Arg NC_008149.1 RefSeq gene 1179430 1179612 . - . ID=gene1089;Name=YPN_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05450 NC_008149.1 Protein Homology CDS 1179430 1179612 . - 0 ID=cds1045;Parent=gene1089;Dbxref=Genbank:WP_002215270.1;Name=WP_002215270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215270.1;transl_table=11 NC_008149.1 RefSeq gene 1179871 1180071 . - . ID=gene1090;Name=YPN_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05455 NC_008149.1 Protein Homology CDS 1179871 1180071 . - 0 ID=cds1046;Parent=gene1090;Dbxref=Genbank:WP_002215268.1;Name=WP_002215268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215268.1;transl_table=11 NC_008149.1 RefSeq gene 1180185 1180682 . - . ID=gene1091;Name=YPN_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05460;old_locus_tag=YPN_1021 NC_008149.1 Protein Homology CDS 1180185 1180682 . - 0 ID=cds1047;Parent=gene1091;Dbxref=Genbank:WP_002228356.1;Name=WP_002228356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228356.1;transl_table=11 NC_008149.1 RefSeq gene 1180720 1180833 . - . ID=gene1092;Name=YPN_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05465;old_locus_tag=YPN_1022 NC_008149.1 Protein Homology CDS 1180720 1180833 . - 0 ID=cds1048;Parent=gene1092;Dbxref=Genbank:WP_002228357.1;Name=WP_002228357.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228357.1;transl_table=11 NC_008149.1 RefSeq gene 1180818 1181156 . - . ID=gene1093;Name=YPN_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05470 NC_008149.1 Protein Homology CDS 1180818 1181156 . - 0 ID=cds1049;Parent=gene1093;Dbxref=Genbank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11 NC_008149.1 RefSeq gene 1181729 1181935 . + . ID=gene1094;Name=YPN_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05475 NC_008149.1 Protein Homology CDS 1181729 1181935 . + 0 ID=cds1050;Parent=gene1094;Dbxref=Genbank:WP_002354559.1;Name=WP_002354559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354559.1;transl_table=11 NC_008149.1 RefSeq gene 1181932 1182108 . + . ID=gene1095;Name=YPN_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05480 NC_008149.1 Protein Homology CDS 1181932 1182108 . + 0 ID=cds1051;Parent=gene1095;Dbxref=Genbank:WP_002209771.1;Name=WP_002209771.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209771.1;transl_table=11 NC_008149.1 RefSeq gene 1182335 1182937 . + . ID=gene1096;Name=YPN_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05485;old_locus_tag=YPN_1024 NC_008149.1 Protein Homology CDS 1182335 1182937 . + 0 ID=cds1052;Parent=gene1096;Dbxref=Genbank:WP_002209770.1;Name=WP_002209770.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209770.1;transl_table=11 NC_008149.1 RefSeq gene 1182930 1183859 . + . ID=gene1097;Name=YPN_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05490;old_locus_tag=YPN_1025 NC_008149.1 Protein Homology CDS 1182930 1183859 . + 0 ID=cds1053;Parent=gene1097;Dbxref=Genbank:WP_002209769.1;Name=WP_002209769.1;gbkey=CDS;product=phosphatidate cytidylyltransferase;protein_id=WP_002209769.1;transl_table=11 NC_008149.1 RefSeq gene 1183869 1184501 . + . ID=gene1098;Name=YPN_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05495;old_locus_tag=YPN_1026 NC_008149.1 Protein Homology CDS 1183869 1184501 . + 0 ID=cds1054;Parent=gene1098;Dbxref=Genbank:WP_002209768.1;Name=WP_002209768.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002209768.1;transl_table=11 NC_008149.1 RefSeq gene 1184498 1186261 . + . ID=gene1099;Name=YPN_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05500;old_locus_tag=YPN_1027 NC_008149.1 Protein Homology CDS 1184498 1186261 . + 0 ID=cds1055;Parent=gene1099;Dbxref=Genbank:WP_002209767.1;Name=WP_002209767.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002209767.1;transl_table=11 NC_008149.1 RefSeq gene 1186254 1187573 . + . ID=gene1100;Name=YPN_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05505;old_locus_tag=YPN_1028 NC_008149.1 Protein Homology CDS 1186254 1187573 . + 0 ID=cds1056;Parent=gene1100;Dbxref=Genbank:WP_002209766.1;Name=WP_002209766.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209766.1;transl_table=11 NC_008149.1 RefSeq gene 1187555 1187956 . + . ID=gene1101;Name=YPN_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05510;old_locus_tag=YPN_1029 NC_008149.1 Protein Homology CDS 1187555 1187956 . + 0 ID=cds1057;Parent=gene1101;Dbxref=Genbank:WP_002209765.1;Name=WP_002209765.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209765.1;transl_table=11 NC_008149.1 RefSeq gene 1188053 1188358 . + . ID=gene1102;Name=YPN_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05515;old_locus_tag=YPN_1030 NC_008149.1 Protein Homology CDS 1188053 1188358 . + 0 ID=cds1058;Parent=gene1102;Dbxref=Genbank:WP_002215253.1;Name=WP_002215253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215253.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1188658 1190615 . + . ID=id110;gbkey=repeat_region NC_008149.1 RefSeq gene 1188725 1189504 . - . ID=gene1103;Name=YPN_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05520;old_locus_tag=YPN_1031 NC_008149.1 Protein Homology CDS 1188725 1189504 . - 0 ID=cds1059;Parent=gene1103;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 1189504 1190526 . - . ID=gene1104;Name=YPN_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05525;old_locus_tag=YPN_1032 NC_008149.1 Protein Homology CDS 1189504 1190526 . - 0 ID=cds1060;Parent=gene1104;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 1190620 1191513 . + . ID=gene1105;Name=YPN_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05530;old_locus_tag=YPN_1033 NC_008149.1 Protein Homology CDS 1190620 1191513 . + 0 ID=cds1061;Parent=gene1105;Dbxref=Genbank:WP_002209764.1;Name=WP_002209764.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209764.1;transl_table=11 NC_008149.1 RefSeq gene 1191568 1192557 . - . ID=gene1106;Name=YPN_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05535;old_locus_tag=YPN_1034 NC_008149.1 Protein Homology CDS 1191568 1192557 . - 0 ID=cds1062;Parent=gene1106;Dbxref=Genbank:WP_002209763.1;Name=WP_002209763.1;gbkey=CDS;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11 NC_008149.1 RefSeq gene 1192583 1193434 . - . ID=gene1107;Name=YPN_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05540;old_locus_tag=YPN_1035 NC_008149.1 Protein Homology CDS 1192583 1193434 . - 0 ID=cds1063;Parent=gene1107;Dbxref=Genbank:WP_002209762.1;Name=WP_002209762.1;gbkey=CDS;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=WP_002209762.1;transl_table=11 NC_008149.1 RefSeq gene 1193625 1193750 . + . ID=gene1108;Name=YPN_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05545;old_locus_tag=YPN_1036 NC_008149.1 Protein Homology CDS 1193625 1193750 . + 0 ID=cds1064;Parent=gene1108;Dbxref=Genbank:WP_002215246.1;Name=WP_002215246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215246.1;transl_table=11 NC_008149.1 RefSeq gene 1193747 1193890 . + . ID=gene1109;Name=YPN_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05550 NC_008149.1 Protein Homology CDS 1193747 1193890 . + 0 ID=cds1065;Parent=gene1109;Dbxref=Genbank:WP_002215244.1;Name=WP_002215244.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215244.1;transl_table=11 NC_008149.1 RefSeq gene 1193907 1195535 . + . ID=gene1110;Name=YPN_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05555;old_locus_tag=YPN_1037 NC_008149.1 Protein Homology CDS 1193907 1195535 . + 0 ID=cds1066;Parent=gene1110;Dbxref=Genbank:WP_002209759.1;Name=WP_002209759.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209759.1;transl_table=11 NC_008149.1 RefSeq gene 1195614 1197995 . - . ID=gene1111;Name=YPN_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05560;old_locus_tag=YPN_1038 NC_008149.1 Protein Homology CDS 1195614 1197995 . - 0 ID=cds1067;Parent=gene1111;Dbxref=Genbank:WP_002228358.1;Name=WP_002228358.1;gbkey=CDS;product=beta-glucosidase;protein_id=WP_002228358.1;transl_table=11 NC_008149.1 RefSeq gene 1198154 1198684 . - . ID=gene1112;Name=YPN_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05565;old_locus_tag=YPN_1039 NC_008149.1 Protein Homology CDS 1198154 1198684 . - 0 ID=cds1068;Parent=gene1112;Dbxref=Genbank:WP_002209757.1;Name=WP_002209757.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209757.1;transl_table=11 NC_008149.1 RefSeq gene 1198677 1200884 . - . ID=gene1113;Name=YPN_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05570;old_locus_tag=YPN_1040 NC_008149.1 Protein Homology CDS 1198677 1200884 . - 0 ID=cds1069;Parent=gene1113;Dbxref=Genbank:WP_002209756.1;Name=WP_002209756.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209756.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1201262 1202582 . + . ID=id111;gbkey=repeat_region NC_008149.1 RefSeq gene 1201336 1202544 . + . ID=gene1114;Name=YPN_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05575;old_locus_tag=YPN_1042 NC_008149.1 Protein Homology CDS 1201336 1202544 . + 0 ID=cds1070;Parent=gene1114;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 1202623 1202931 . + . ID=gene1115;Name=YPN_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05580;old_locus_tag=YPN_1043 NC_008149.1 Protein Homology CDS 1202623 1202931 . + 0 ID=cds1071;Parent=gene1115;Dbxref=Genbank:WP_002209754.1;Name=WP_002209754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209754.1;transl_table=11 NC_008149.1 RefSeq gene 1202946 1203527 . - . ID=gene1116;Name=YPN_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05585;old_locus_tag=YPN_1044 NC_008149.1 Protein Homology CDS 1202946 1203527 . - 0 ID=cds1072;Parent=gene1116;Dbxref=Genbank:WP_002209753.1;Name=WP_002209753.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209753.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1203865 1204038 . + . ID=id112;gbkey=repeat_region NC_008149.1 RefSeq gene 1204062 1205978 . - . ID=gene1117;Name=YPN_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05590;old_locus_tag=YPN_1045 NC_008149.1 Protein Homology CDS 1204062 1205978 . - 0 ID=cds1073;Parent=gene1117;Dbxref=Genbank:WP_002209752.1;Name=WP_002209752.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209752.1;transl_table=11 NC_008149.1 RefSeq gene 1206787 1207026 . + . ID=gene1118;Name=YPN_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05595;old_locus_tag=YPN_1046 NC_008149.1 Protein Homology CDS 1206787 1207026 . + 0 ID=cds1074;Parent=gene1118;Dbxref=Genbank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11 NC_008149.1 RefSeq gene 1207065 1207316 . + . ID=gene1119;Name=YPN_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05600;old_locus_tag=YPN_1047 NC_008149.1 Protein Homology CDS 1207065 1207316 . + 0 ID=cds1075;Parent=gene1119;Dbxref=Genbank:WP_002227852.1;Name=WP_002227852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227852.1;transl_table=11 NC_008149.1 RefSeq gene 1207340 1207912 . + . ID=gene1120;Name=YPN_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05605;old_locus_tag=YPN_1048 NC_008149.1 Protein Homology CDS 1207340 1207912 . + 0 ID=cds1076;Parent=gene1120;Dbxref=Genbank:WP_002209749.1;Name=WP_002209749.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209749.1;transl_table=11 NC_008149.1 RefSeq gene 1207924 1208325 . - . ID=gene1121;Name=YPN_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05610;old_locus_tag=YPN_1049 NC_008149.1 Protein Homology CDS 1207924 1208325 . - 0 ID=cds1077;Parent=gene1121;Dbxref=Genbank:WP_002209748.1;Name=WP_002209748.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209748.1;transl_table=11 NC_008149.1 RefSeq gene 1208558 1208959 . - . ID=gene1122;Name=YPN_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05615;old_locus_tag=YPN_1051 NC_008149.1 Protein Homology CDS 1208558 1208959 . - 0 ID=cds1078;Parent=gene1122;Dbxref=Genbank:WP_002209746.1;Name=WP_002209746.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209746.1;transl_table=11 NC_008149.1 RefSeq gene 1208952 1209155 . - . ID=gene1123;Name=YPN_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05620;old_locus_tag=YPN_1052 NC_008149.1 Protein Homology CDS 1208952 1209155 . - 0 ID=cds1079;Parent=gene1123;Dbxref=Genbank:WP_002216003.1;Name=WP_002216003.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216003.1;transl_table=11 NC_008149.1 RefSeq gene 1209227 1209808 . - . ID=gene1124;Name=YPN_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05625;old_locus_tag=YPN_1053 NC_008149.1 Protein Homology CDS 1209227 1209808 . - 0 ID=cds1080;Parent=gene1124;Dbxref=Genbank:WP_002216002.1;Name=WP_002216002.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216002.1;transl_table=11 NC_008149.1 RefSeq gene 1210481 1210726 . + . ID=gene1125;Name=YPN_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05630;old_locus_tag=YPN_1054 NC_008149.1 Protein Homology CDS 1210481 1210726 . + 0 ID=cds1081;Parent=gene1125;Dbxref=Genbank:WP_002209745.1;Name=WP_002209745.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002209745.1;transl_table=11 NC_008149.1 RefSeq gene 1210939 1213302 . - . ID=gene1126;Name=YPN_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05635;old_locus_tag=YPN_1055 NC_008149.1 Protein Homology CDS 1210939 1213302 . - 0 ID=cds1082;Parent=gene1126;Dbxref=Genbank:WP_002223314.1;Name=WP_002223314.1;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=WP_002223314.1;transl_table=11 NC_008149.1 RefSeq gene 1213337 1213507 . + . ID=gene1127;Name=YPN_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05640 NC_008149.1 Protein Homology CDS 1213337 1213507 . + 0 ID=cds1083;Parent=gene1127;Dbxref=Genbank:WP_025470849.1;Name=WP_025470849.1;gbkey=CDS;product=transposase;protein_id=WP_025470849.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1213349 1214067 . + . ID=id113;gbkey=repeat_region NC_008149.1 RefSeq gene 1213497 1213955 . + . ID=gene1128;Name=YPN_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05645;old_locus_tag=YPN_1056 NC_008149.1 Protein Homology CDS 1213497 1213955 . + 0 ID=cds1084;Parent=gene1128;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1214070 1220048 . - . ID=gene1129;Name=YPN_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05650;old_locus_tag=YPN_1057 NC_008149.1 Protein Homology CDS 1214070 1220048 . - 0 ID=cds1085;Parent=gene1129;Dbxref=Genbank:WP_002210294.1;Name=WP_002210294.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210294.1;transl_table=11 NC_008149.1 RefSeq gene 1220455 1221003 . - . ID=gene1130;Name=YPN_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05655;old_locus_tag=YPN_1058 NC_008149.1 Protein Homology CDS 1220455 1221003 . - 0 ID=cds1086;Parent=gene1130;Dbxref=Genbank:WP_002223316.1;Name=WP_002223316.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223316.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1221364 1221633 . + . ID=id114;gbkey=repeat_region NC_008149.1 RefSeq gene 1221637 1222491 . - . ID=gene1131;Name=YPN_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05660;old_locus_tag=YPN_1060 NC_008149.1 Protein Homology CDS 1221637 1222491 . - 0 ID=cds1087;Parent=gene1131;Dbxref=Genbank:WP_002210296.1;Name=WP_002210296.1;gbkey=CDS;product=(Fe-S)-cluster assembly protein;protein_id=WP_002210296.1;transl_table=11 NC_008149.1 RefSeq gene 1222829 1224355 . + . ID=gene1132;Name=YPN_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05665;old_locus_tag=YPN_1061 NC_008149.1 Protein Homology CDS 1222829 1224355 . + 0 ID=cds1088;Parent=gene1132;Dbxref=Genbank:WP_002210297.1;Name=WP_002210297.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002210297.1;transl_table=11 NC_008149.1 RefSeq gene 1224390 1226315 . + . ID=gene1133;Name=YPN_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05670;old_locus_tag=YPN_1062 NC_008149.1 Protein Homology CDS 1224390 1226315 . + 0 ID=cds1089;Parent=gene1133;Dbxref=Genbank:WP_002359655.1;Name=WP_002359655.1;gbkey=CDS;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione hydrolase;protein_id=WP_002359655.1;transl_table=11 NC_008149.1 RefSeq gene 1226609 1227594 . + . ID=gene1134;Name=YPN_RS05675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS05675;pseudo=true NC_008149.1 Protein Homology CDS 1226609 1227594 . + 0 ID=cds1090;Parent=gene1134;exception=annotated by transcript or proteomic data;gbkey=CDS;product=inositol 2-dehydrogenase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 1227720 1228649 . + . ID=gene1135;Name=YPN_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05680;old_locus_tag=YPN_1065 NC_008149.1 Protein Homology CDS 1227720 1228649 . + 0 ID=cds1091;Parent=gene1135;Dbxref=Genbank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210300.1;transl_table=11 NC_008149.1 RefSeq gene 1228698 1230245 . + . ID=gene1136;Name=YPN_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05685;old_locus_tag=YPN_1066 NC_008149.1 Protein Homology CDS 1228698 1230245 . + 0 ID=cds1092;Parent=gene1136;Dbxref=Genbank:WP_002223323.1;Name=WP_002223323.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=asparaginase;protein_id=WP_002223323.1;transl_table=11 NC_008149.1 RefSeq gene 1230257 1231285 . + . ID=gene1137;Name=YPN_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05690;old_locus_tag=YPN_1067 NC_008149.1 Protein Homology CDS 1230257 1231285 . + 0 ID=cds1093;Parent=gene1137;Dbxref=Genbank:WP_002210302.1;Name=WP_002210302.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210302.1;transl_table=11 NC_008149.1 RefSeq gene 1231309 1232442 . + . ID=gene1138;Name=YPN_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05695;old_locus_tag=YPN_1068 NC_008149.1 Protein Homology CDS 1231309 1232442 . + 0 ID=cds1094;Parent=gene1138;Dbxref=Genbank:WP_002210303.1;Name=WP_002210303.1;gbkey=CDS;product=myo-inositol 2-dehydrogenase;protein_id=WP_002210303.1;transl_table=11 NC_008149.1 RefSeq gene 1232567 1234444 . + . ID=gene1139;Name=YPN_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05700;old_locus_tag=YPN_1069 NC_008149.1 Protein Homology CDS 1232567 1234444 . + 0 ID=cds1095;Parent=gene1139;Dbxref=Genbank:WP_002222597.1;Name=WP_002222597.1;gbkey=CDS;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_002222597.1;transl_table=11 NC_008149.1 RefSeq gene 1234597 1235517 . + . ID=gene1140;Name=YPN_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05705;old_locus_tag=YPN_1070 NC_008149.1 Protein Homology CDS 1234597 1235517 . + 0 ID=cds1096;Parent=gene1140;Dbxref=Genbank:WP_002227877.1;Name=WP_002227877.1;gbkey=CDS;product=myo-inosose-2 dehydratase;protein_id=WP_002227877.1;transl_table=11 NC_008149.1 RefSeq gene 1235527 1236342 . + . ID=gene1141;Name=YPN_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05710;old_locus_tag=YPN_1071 NC_008149.1 Protein Homology CDS 1235527 1236342 . + 0 ID=cds1097;Parent=gene1141;Dbxref=Genbank:WP_002210306.1;Name=WP_002210306.1;gbkey=CDS;product=5-deoxy-glucuronate isomerase;protein_id=WP_002210306.1;transl_table=11 NC_008149.1 RefSeq gene 1236501 1236704 . + . ID=gene1142;Name=YPN_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05715 NC_008149.1 Protein Homology CDS 1236501 1236704 . + 0 ID=cds1098;Parent=gene1142;Dbxref=Genbank:WP_002214722.1;Name=WP_002214722.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214722.1;transl_table=11 NC_008149.1 RefSeq gene 1236912 1238702 . + . ID=gene1143;Name=YPN_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05720;old_locus_tag=YPN_1073 NC_008149.1 Protein Homology CDS 1236912 1238702 . + 0 ID=cds1099;Parent=gene1143;Dbxref=Genbank:WP_002214723.1;Name=WP_002214723.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002214723.1;transl_table=11 NC_008149.1 RefSeq gene 1238718 1239005 . - . ID=gene1144;Name=YPN_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05725;old_locus_tag=YPN_1074 NC_008149.1 Protein Homology CDS 1238718 1239005 . - 0 ID=cds1100;Parent=gene1144;Dbxref=Genbank:WP_002210309.1;Name=WP_002210309.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002210309.1;transl_table=11 NC_008149.1 RefSeq gene 1239448 1239642 . + . ID=gene1145;Name=YPN_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05730;old_locus_tag=YPN_1075 NC_008149.1 Protein Homology CDS 1239448 1239642 . + 0 ID=cds1101;Parent=gene1145;Dbxref=Genbank:WP_002210310.1;Name=WP_002210310.1;gbkey=CDS;product=glycogen synthase;protein_id=WP_002210310.1;transl_table=11 NC_008149.1 RefSeq gene 1239660 1239842 . - . ID=gene1146;Name=YPN_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05735 NC_008149.1 Protein Homology CDS 1239660 1239842 . - 0 ID=cds1102;Parent=gene1146;Dbxref=Genbank:WP_002210311.1;Name=WP_002210311.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210311.1;transl_table=11 NC_008149.1 RefSeq gene 1240024 1240989 . - . ID=gene1147;Name=YPN_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05740;old_locus_tag=YPN_1077 NC_008149.1 Protein Homology CDS 1240024 1240989 . - 0 ID=cds1103;Parent=gene1147;Dbxref=Genbank:WP_002210312.1;Name=WP_002210312.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210312.1;transl_table=11 NC_008149.1 RefSeq gene 1241439 1242029 . + . ID=gene1148;Name=YPN_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05745;old_locus_tag=YPN_1078 NC_008149.1 Protein Homology CDS 1241439 1242029 . + 0 ID=cds1104;Parent=gene1148;Dbxref=Genbank:WP_002210313.1;Name=WP_002210313.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002210313.1;transl_table=11 NC_008149.1 RefSeq gene 1242339 1242818 . - . ID=gene1149;Name=YPN_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05750;old_locus_tag=YPN_1079 NC_008149.1 Protein Homology CDS 1242339 1242818 . - 0 ID=cds1105;Parent=gene1149;Dbxref=Genbank:WP_012229509.1;Name=WP_012229509.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_012229509.1;transl_table=11 NC_008149.1 cmsearch region 1242924 1243352 . + . ID=id115;Note=cspA;gbkey=misc_feature NC_008149.1 RefSeq gene 1243097 1243306 . + . ID=gene1150;Name=YPN_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05755;old_locus_tag=YPN_5000 NC_008149.1 Protein Homology CDS 1243097 1243306 . + 0 ID=cds1106;Parent=gene1150;Dbxref=Genbank:WP_002210315.1;Name=WP_002210315.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210315.1;transl_table=11 NC_008149.1 RefSeq gene 1243729 1244112 . - . ID=gene1151;Name=YPN_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05760;old_locus_tag=YPN_1081 NC_008149.1 Protein Homology CDS 1243729 1244112 . - 0 ID=cds1107;Parent=gene1151;Dbxref=Genbank:WP_002210317.1;Name=WP_002210317.1;Note=camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=WP_002210317.1;transl_table=11 NC_008149.1 RefSeq gene 1244472 1244624 . + . ID=gene1152;Name=YPN_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05765 NC_008149.1 Protein Homology CDS 1244472 1244624 . + 0 ID=cds1108;Parent=gene1152;Dbxref=Genbank:WP_002210318.1;Name=WP_002210318.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210318.1;transl_table=11 NC_008149.1 RefSeq gene 1244679 1244936 . + . ID=gene1153;Name=YPN_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05770;old_locus_tag=YPN_1082 NC_008149.1 Protein Homology CDS 1244679 1244936 . + 0 ID=cds1109;Parent=gene1153;Dbxref=Genbank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;product=sec-independent protein translocase tatE;protein_id=WP_002210319.1;transl_table=11 NC_008149.1 RefSeq gene 1245117 1246082 . - . ID=gene1154;Name=YPN_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05775;old_locus_tag=YPN_1083 NC_008149.1 Protein Homology CDS 1245117 1246082 . - 0 ID=cds1110;Parent=gene1154;Dbxref=Genbank:WP_002210320.1;Name=WP_002210320.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11 NC_008149.1 RefSeq gene 1246275 1246976 . - . ID=gene1155;Name=YPN_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05780;old_locus_tag=YPN_1084 NC_008149.1 Protein Homology CDS 1246275 1246976 . - 0 ID=cds1111;Parent=gene1155;Dbxref=Genbank:WP_002218201.1;Name=WP_002218201.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=octanoyltransferase;protein_id=WP_002218201.1;transl_table=11 NC_008149.1 RefSeq gene 1247188 1247451 . - . ID=gene1156;Name=YPN_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05785;old_locus_tag=YPN_1085 NC_008149.1 Protein Homology CDS 1247188 1247451 . - 0 ID=cds1112;Parent=gene1156;Dbxref=Genbank:WP_002210322.1;Name=WP_002210322.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210322.1;transl_table=11 NC_008149.1 RefSeq gene 1247649 1248851 . - . ID=gene1157;Name=YPN_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05790;old_locus_tag=YPN_1086 NC_008149.1 Protein Homology CDS 1247649 1248851 . - 0 ID=cds1113;Parent=gene1157;Dbxref=Genbank:WP_002210323.1;Name=WP_002210323.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002210323.1;transl_table=11 NC_008149.1 RefSeq gene 1249254 1250336 . - . ID=gene1158;Name=YPN_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05795;old_locus_tag=YPN_1087 NC_008149.1 Protein Homology CDS 1249254 1250336 . - 0 ID=cds1114;Parent=gene1158;Dbxref=Genbank:WP_002210324.1;Name=WP_002210324.1;Note=septal ring protein%2C suppressor of prc%2C minor lipoprotein;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210324.1;transl_table=11 NC_008149.1 RefSeq gene 1250346 1251458 . - . ID=gene1159;Name=YPN_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05800;old_locus_tag=YPN_1088 NC_008149.1 Protein Homology CDS 1250346 1251458 . - 0 ID=cds1115;Parent=gene1159;Dbxref=Genbank:WP_002210325.1;Name=WP_002210325.1;gbkey=CDS;product=cell wall shape-determining protein;protein_id=WP_002210325.1;transl_table=11 NC_008149.1 RefSeq gene 1251643 1253538 . - . ID=gene1160;Name=YPN_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05805;old_locus_tag=YPN_1089 NC_008149.1 Protein Homology CDS 1251643 1253538 . - 0 ID=cds1116;Parent=gene1160;Dbxref=Genbank:WP_002210326.1;Name=WP_002210326.1;gbkey=CDS;product=penicillin-binding protein 2;protein_id=WP_002210326.1;transl_table=11 NC_008149.1 RefSeq gene 1253620 1254090 . - . ID=gene1161;Name=YPN_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05810;old_locus_tag=YPN_1090 NC_008149.1 Protein Homology CDS 1253620 1254090 . - 0 ID=cds1117;Parent=gene1161;Dbxref=Genbank:WP_002210328.1;Name=WP_002210328.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase H;protein_id=WP_002210328.1;transl_table=11 NC_008149.1 RefSeq gene 1254094 1254411 . - . ID=gene1162;Name=YPN_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05815;old_locus_tag=YPN_1091 NC_008149.1 Protein Homology CDS 1254094 1254411 . - 0 ID=cds1118;Parent=gene1162;Dbxref=Genbank:WP_002210329.1;Name=WP_002210329.1;gbkey=CDS;product=ribosome silencing factor RsfS;protein_id=WP_002210329.1;transl_table=11 NC_008149.1 RefSeq gene 1254635 1255297 . - . ID=gene1163;Name=YPN_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05820;old_locus_tag=YPN_1092 NC_008149.1 Protein Homology CDS 1254635 1255297 . - 0 ID=cds1119;Parent=gene1163;Dbxref=Genbank:WP_002210330.1;Name=WP_002210330.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_002210330.1;transl_table=11 NC_008149.1 RefSeq gene 1255287 1256321 . - . ID=gene1164;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=YPN_RS05825;old_locus_tag=YPN_1093 NC_008149.1 Protein Homology CDS 1255287 1256321 . - 0 ID=cds1120;Parent=gene1164;Dbxref=Genbank:WP_002210331.1;Name=WP_002210331.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=WP_002210331.1;transl_table=11 NC_008149.1 RefSeq gene 1256318 1256941 . - . ID=gene1165;Name=YPN_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05830;old_locus_tag=YPN_1094 NC_008149.1 Protein Homology CDS 1256318 1256941 . - 0 ID=cds1121;Parent=gene1165;Dbxref=Genbank:WP_002210332.1;Name=WP_002210332.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210332.1;transl_table=11 NC_008149.1 RefSeq gene 1256956 1259538 . - . ID=gene1166;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=YPN_RS05835;old_locus_tag=YPN_1095 NC_008149.1 Protein Homology CDS 1256956 1259538 . - 0 ID=cds1122;Parent=gene1166;Dbxref=Genbank:WP_002210333.1;Name=WP_002210333.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11 NC_008149.1 RefSeq gene 1259799 1260281 . + . ID=gene1167;Name=YPN_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05840;old_locus_tag=YPN_1096 NC_008149.1 Protein Homology CDS 1259799 1260281 . + 0 ID=cds1123;Parent=gene1167;Dbxref=Genbank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210335.1;transl_table=11 NC_008149.1 RefSeq gene 1260415 1261140 . - . ID=gene1168;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=YPN_RS05845;old_locus_tag=YPN_1097 NC_008149.1 Protein Homology CDS 1260415 1261140 . - 0 ID=cds1124;Parent=gene1168;Dbxref=Genbank:WP_002210336.1;Name=WP_002210336.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002210336.1;transl_table=11 NC_008149.1 RefSeq gene 1261140 1261814 . - . ID=gene1169;Name=YPN_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05850;old_locus_tag=YPN_1098 NC_008149.1 Protein Homology CDS 1261140 1261814 . - 0 ID=cds1125;Parent=gene1169;Dbxref=Genbank:WP_002210337.1;Name=WP_002210337.1;gbkey=CDS;product=glutamate/aspartate transporter permease GltK;protein_id=WP_002210337.1;transl_table=11 NC_008149.1 RefSeq gene 1261814 1262554 . - . ID=gene1170;Name=YPN_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05855;old_locus_tag=YPN_1099 NC_008149.1 Protein Homology CDS 1261814 1262554 . - 0 ID=cds1126;Parent=gene1170;Dbxref=Genbank:WP_002223337.1;Name=WP_002223337.1;Note=with GltIKL is involved in the transport of glutamate and aspartate;gbkey=CDS;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_002223337.1;transl_table=11 NC_008149.1 RefSeq gene 1262728 1263645 . - . ID=gene1171;Name=YPN_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05860;old_locus_tag=YPN_1100 NC_008149.1 Protein Homology CDS 1262728 1263645 . - 0 ID=cds1127;Parent=gene1171;Dbxref=Genbank:WP_002210339.1;Name=WP_002210339.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210339.1;transl_table=11 NC_008149.1 RefSeq gene 1264410 1265957 . - . ID=gene1172;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=YPN_RS05865;old_locus_tag=YPN_1101 NC_008149.1 Protein Homology CDS 1264410 1265957 . - 0 ID=cds1128;Parent=gene1172;Dbxref=Genbank:WP_002210341.1;Name=WP_002210341.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=WP_002210341.1;transl_table=11 NC_008149.1 RefSeq gene 1265965 1266843 . - . ID=gene1173;Name=YPN_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05870;old_locus_tag=YPN_1102 NC_008149.1 Protein Homology CDS 1265965 1266843 . - 0 ID=cds1129;Parent=gene1173;Dbxref=Genbank:WP_002210342.1;Name=WP_002210342.1;Note=involved in the transport of magnesium and cobalt ions;gbkey=CDS;product=cobalt transporter;protein_id=WP_002210342.1;transl_table=11 NC_008149.1 RefSeq gene 1266961 1267434 . - . ID=gene1174;Name=YPN_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05875;old_locus_tag=YPN_1104 NC_008149.1 Protein Homology CDS 1266961 1267434 . - 0 ID=cds1130;Parent=gene1174;Dbxref=Genbank:WP_002210344.1;Name=WP_002210344.1;gbkey=CDS;product=endoribonuclease YbeY;protein_id=WP_002210344.1;transl_table=11 NC_008149.1 RefSeq gene 1267431 1268486 . - . ID=gene1175;Name=YPN_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05880;old_locus_tag=YPN_1105 NC_008149.1 Protein Homology CDS 1267431 1268486 . - 0 ID=cds1131;Parent=gene1175;Dbxref=Genbank:WP_002354474.1;Name=WP_002354474.1;gbkey=CDS;product=nucleoside triphosphate hydrolase;protein_id=WP_002354474.1;transl_table=11 NC_008149.1 RefSeq gene 1268831 1270255 . - . ID=gene1176;Name=YPN_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05885;old_locus_tag=YPN_1106 NC_008149.1 Protein Homology CDS 1268831 1270255 . - 0 ID=cds1132;Parent=gene1176;Dbxref=Genbank:WP_002227875.1;Name=WP_002227875.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;protein_id=WP_002227875.1;transl_table=11 NC_008149.1 RefSeq gene 1270497 1271678 . + . ID=gene1177;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=YPN_RS05890;old_locus_tag=YPN_1107 NC_008149.1 Protein Homology CDS 1270497 1271678 . + 0 ID=cds1133;Parent=gene1177;Dbxref=Genbank:WP_002210347.1;Name=WP_002210347.1;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_002210347.1;transl_table=11 NC_008149.1 RefSeq gene 1272072 1272146 . - . ID=gene1178;Name=YPN_RS05895;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS05895;old_locus_tag=YPN_r048 NC_008149.1 tRNAscan-SE tRNA 1272072 1272146 . - . ID=rna42;Parent=gene1178;anticodon=(pos:complement(1272112..1272114));gbkey=tRNA;product=tRNA-Gln NC_008149.1 tRNAscan-SE exon 1272072 1272146 . - . ID=id116;Parent=rna42;anticodon=(pos:complement(1272112..1272114));gbkey=tRNA;product=tRNA-Gln NC_008149.1 RefSeq gene 1272152 1272228 . - . ID=gene1179;Name=YPN_RS05900;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS05900;old_locus_tag=YPN_r049 NC_008149.1 tRNAscan-SE tRNA 1272152 1272228 . - . ID=rna43;Parent=gene1179;anticodon=(pos:complement(1272192..1272194));gbkey=tRNA;product=tRNA-Met NC_008149.1 tRNAscan-SE exon 1272152 1272228 . - . ID=id117;Parent=rna43;anticodon=(pos:complement(1272192..1272194));gbkey=tRNA;product=tRNA-Met NC_008149.1 RefSeq gene 1272261 1272335 . - . ID=gene1180;Name=YPN_RS05905;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS05905;old_locus_tag=YPN_r050 NC_008149.1 tRNAscan-SE tRNA 1272261 1272335 . - . ID=rna44;Parent=gene1180;anticodon=(pos:complement(1272301..1272303));gbkey=tRNA;product=tRNA-Gln NC_008149.1 tRNAscan-SE exon 1272261 1272335 . - . ID=id118;Parent=rna44;anticodon=(pos:complement(1272301..1272303));gbkey=tRNA;product=tRNA-Gln NC_008149.1 RefSeq gene 1272431 1272505 . - . ID=gene1181;Name=YPN_RS05910;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS05910;old_locus_tag=YPN_r051 NC_008149.1 tRNAscan-SE tRNA 1272431 1272505 . - . ID=rna45;Parent=gene1181;anticodon=(pos:complement(1272471..1272473));gbkey=tRNA;product=tRNA-Gln NC_008149.1 tRNAscan-SE exon 1272431 1272505 . - . ID=id119;Parent=rna45;anticodon=(pos:complement(1272471..1272473));gbkey=tRNA;product=tRNA-Gln NC_008149.1 RefSeq gene 1272535 1272619 . - . ID=gene1182;Name=YPN_RS05915;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS05915;old_locus_tag=YPN_r052 NC_008149.1 tRNAscan-SE tRNA 1272535 1272619 . - . ID=rna46;Parent=gene1182;anticodon=(pos:complement(1272583..1272585));gbkey=tRNA;product=tRNA-Leu NC_008149.1 tRNAscan-SE exon 1272535 1272619 . - . ID=id120;Parent=rna46;anticodon=(pos:complement(1272583..1272585));gbkey=tRNA;product=tRNA-Leu NC_008149.1 RefSeq gene 1272627 1272703 . - . ID=gene1183;Name=YPN_RS05920;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS05920;old_locus_tag=YPN_r053 NC_008149.1 tRNAscan-SE tRNA 1272627 1272703 . - . ID=rna47;Parent=gene1183;anticodon=(pos:complement(1272667..1272669));gbkey=tRNA;product=tRNA-Met NC_008149.1 tRNAscan-SE exon 1272627 1272703 . - . ID=id121;Parent=rna47;anticodon=(pos:complement(1272667..1272669));gbkey=tRNA;product=tRNA-Met NC_008149.1 RefSeq gene 1272975 1273112 . + . ID=gene1184;Name=YPN_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05925 NC_008149.1 Protein Homology CDS 1272975 1273112 . + 0 ID=cds1134;Parent=gene1184;Dbxref=Genbank:WP_002222587.1;Name=WP_002222587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222587.1;transl_table=11 NC_008149.1 RefSeq gene 1273161 1274825 . - . ID=gene1185;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=YPN_RS05930;old_locus_tag=YPN_1109 NC_008149.1 Protein Homology CDS 1273161 1274825 . - 0 ID=cds1135;Parent=gene1185;Dbxref=Genbank:WP_002210348.1;Name=WP_002210348.1;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=WP_002210348.1;transl_table=11 NC_008149.1 RefSeq gene 1275180 1275932 . - . ID=gene1186;Name=YPN_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05935;old_locus_tag=YPN_1110 NC_008149.1 Protein Homology CDS 1275180 1275932 . - 0 ID=cds1136;Parent=gene1186;Dbxref=Genbank:WP_002210349.1;Name=WP_002210349.1;gbkey=CDS;product=UMP phosphatase;protein_id=WP_002210349.1;transl_table=11 NC_008149.1 RefSeq gene 1276005 1277231 . - . ID=gene1187;Name=YPN_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05940;old_locus_tag=YPN_1111 NC_008149.1 Protein Homology CDS 1276005 1277231 . - 0 ID=cds1137;Parent=gene1187;Dbxref=Genbank:WP_002224863.1;Name=WP_002224863.1;Note=regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002224863.1;transl_table=11 NC_008149.1 RefSeq gene 1277248 1278393 . - . ID=gene1188;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YPN_RS05945;old_locus_tag=YPN_1112 NC_008149.1 Protein Homology CDS 1277248 1278393 . - 0 ID=cds1138;Parent=gene1188;Dbxref=Genbank:WP_002210351.1;Name=WP_002210351.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002210351.1;transl_table=11 NC_008149.1 RefSeq gene 1278413 1279213 . - . ID=gene1189;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=YPN_RS05950;old_locus_tag=YPN_1113 NC_008149.1 Protein Homology CDS 1278413 1279213 . - 0 ID=cds1139;Parent=gene1189;Dbxref=Genbank:WP_002210352.1;Name=WP_002210352.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=WP_002210352.1;transl_table=11 NC_008149.1 RefSeq gene 1279613 1281646 . + . ID=gene1190;Name=YPN_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05955;old_locus_tag=YPN_1114 NC_008149.1 Protein Homology CDS 1279613 1281646 . + 0 ID=cds1140;Parent=gene1190;Dbxref=Genbank:WP_002210353.1;Name=WP_002210353.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS N-acetylglucosamine transporter subunit IIABC;protein_id=WP_002210353.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1281758 1282481 . + . ID=id122;gbkey=repeat_region NC_008149.1 RefSeq gene 1281911 1282369 . + . ID=gene1191;Name=YPN_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05960;old_locus_tag=YPN_1115 NC_008149.1 Protein Homology CDS 1281911 1282369 . + 0 ID=cds1141;Parent=gene1191;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1282571 1284238 . + . ID=gene1192;Name=YPN_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05965;old_locus_tag=YPN_1116 NC_008149.1 Protein Homology CDS 1282571 1284238 . + 0 ID=cds1142;Parent=gene1192;Dbxref=Genbank:WP_002210354.1;Name=WP_002210354.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_002210354.1;transl_table=11 NC_008149.1 RefSeq gene 1284944 1286365 . + . ID=gene1193;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=YPN_RS05970;old_locus_tag=YPN_1117 NC_008149.1 Protein Homology CDS 1284944 1286365 . + 0 ID=cds1143;Parent=gene1193;Dbxref=Genbank:WP_002210355.1;Name=WP_002210355.1;Note=outer membrane porin involved in the transport of chitooligosaccharides;gbkey=CDS;gene=chiP;product=porin;protein_id=WP_002210355.1;transl_table=11 NC_008149.1 RefSeq gene 1286693 1289357 . + . ID=gene1194;Name=YPN_RS05975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS05975;old_locus_tag=YPN_1119;pseudo=true NC_008149.1 Protein Homology CDS 1286693 1289357 . + 0 ID=cds1144;Parent=gene1194;exception=annotated by transcript or proteomic data;gbkey=CDS;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 1289798 1290244 . - . ID=gene1195;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=YPN_RS05980;old_locus_tag=YPN_1120 NC_008149.1 Protein Homology CDS 1289798 1290244 . - 0 ID=cds1145;Parent=gene1195;Dbxref=Genbank:WP_002210357.1;Name=WP_002210357.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulation protein;protein_id=WP_002210357.1;transl_table=11 NC_008149.1 RefSeq gene 1290611 1291138 . - . ID=gene1196;Name=YPN_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05985;old_locus_tag=YPN_1121 NC_008149.1 Protein Homology CDS 1290611 1291138 . - 0 ID=cds1146;Parent=gene1196;Dbxref=Genbank:WP_002215386.1;Name=WP_002215386.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002215386.1;transl_table=11 NC_008149.1 RefSeq gene 1291555 1291842 . - . ID=gene1197;Name=YPN_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05990;old_locus_tag=YPN_1122 NC_008149.1 Protein Homology CDS 1291555 1291842 . - 0 ID=cds1147;Parent=gene1197;Dbxref=Genbank:WP_002212202.1;Name=WP_002212202.1;gbkey=CDS;product=LexA regulated protein;protein_id=WP_002212202.1;transl_table=11 NC_008149.1 RefSeq gene 1291897 1292022 . + . ID=gene1198;Name=YPN_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS05995 NC_008149.1 Protein Homology CDS 1291897 1292022 . + 0 ID=cds1148;Parent=gene1198;Dbxref=Genbank:WP_002215389.1;Name=WP_002215389.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215389.1;transl_table=11 NC_008149.1 RefSeq gene 1292174 1292941 . - . ID=gene1199;Name=YPN_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06000;old_locus_tag=YPN_1123 NC_008149.1 Protein Homology CDS 1292174 1292941 . - 0 ID=cds1149;Parent=gene1199;Dbxref=Genbank:WP_002215390.1;Name=WP_002215390.1;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002215390.1;transl_table=11 NC_008149.1 RefSeq gene 1293652 1293903 . + . ID=gene1200;Name=YPN_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06005 NC_008149.1 Protein Homology CDS 1293652 1293903 . + 0 ID=cds1150;Parent=gene1200;Dbxref=Genbank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11 NC_008149.1 RefSeq gene 1294066 1294251 . - . ID=gene1201;Name=YPN_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06010;old_locus_tag=YPN_1124 NC_008149.1 Protein Homology CDS 1294066 1294251 . - 0 ID=cds1151;Parent=gene1201;Dbxref=Genbank:WP_002215393.1;Name=WP_002215393.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215393.1;transl_table=11 NC_008149.1 RefSeq gene 1294334 1294597 . - . ID=gene1202;Name=YPN_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06015;old_locus_tag=YPN_1125 NC_008149.1 Protein Homology CDS 1294334 1294597 . - 0 ID=cds1152;Parent=gene1202;Dbxref=Genbank:WP_002212205.1;Name=WP_002212205.1;gbkey=CDS;product=transposase;protein_id=WP_002212205.1;transl_table=11 NC_008149.1 RefSeq gene 1294667 1295131 . - . ID=gene1203;Name=YPN_RS06020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS06020;old_locus_tag=YPN_1126;partial=true;pseudo=true;start_range=.,1294667 NC_008149.1 Protein Homology CDS 1294667 1295131 . - 0 ID=cds1153;Parent=gene1203;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1294667;transl_table=11 NC_008149.1 RefSeq repeat_region 1295076 1297035 . + . ID=id123;gbkey=repeat_region NC_008149.1 RefSeq gene 1295144 1295437 . - . ID=gene1204;Name=YPN_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06025;old_locus_tag=YPN_1127 NC_008149.1 Protein Homology CDS 1295144 1295437 . - 0 ID=cds1154;Parent=gene1204;Dbxref=Genbank:WP_000035465.1;Name=WP_000035465.1;gbkey=CDS;product=transposase;protein_id=WP_000035465.1;transl_table=11 NC_008149.1 RefSeq gene 1295460 1295924 . - . ID=gene1205;Name=YPN_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06030;old_locus_tag=YPN_1128 NC_008149.1 Protein Homology CDS 1295460 1295924 . - 0 ID=cds1155;Parent=gene1205;Dbxref=Genbank:WP_048814499.1;Name=WP_048814499.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_048814499.1;transl_table=11 NC_008149.1 RefSeq gene 1295924 1296946 . - . ID=gene1206;Name=YPN_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06035;old_locus_tag=YPN_1129 NC_008149.1 Protein Homology CDS 1295924 1296946 . - 0 ID=cds1156;Parent=gene1206;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 1297033 1297770 . + . ID=gene1207;Name=YPN_RS06040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS06040;old_locus_tag=YPN_1130;partial=true;pseudo=true;start_range=.,1297033 NC_008149.1 Protein Homology CDS 1297033 1297770 . + 0 ID=cds1157;Parent=gene1207;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=allantoinase;pseudo=true;start_range=.,1297033;transl_table=11 NC_008149.1 RefSeq repeat_region 1297799 1297969 . + . ID=id124;gbkey=repeat_region NC_008149.1 RefSeq gene 1298000 1299004 . - . ID=gene1208;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=YPN_RS06045;old_locus_tag=YPN_1131 NC_008149.1 Protein Homology CDS 1298000 1299004 . - 0 ID=cds1158;Parent=gene1208;Dbxref=Genbank:WP_002215933.1;Name=WP_002215933.1;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;gbkey=CDS;gene=proX;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002215933.1;transl_table=11 NC_008149.1 RefSeq gene 1299052 1300218 . - . ID=gene1209;Name=YPN_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06050;old_locus_tag=YPN_1132 NC_008149.1 Protein Homology CDS 1299052 1300218 . - 0 ID=cds1159;Parent=gene1209;Dbxref=Genbank:WP_002212209.1;Name=WP_002212209.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter permease;protein_id=WP_002212209.1;transl_table=11 NC_008149.1 RefSeq gene 1300211 1301410 . - . ID=gene1210;Name=YPN_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06055;old_locus_tag=YPN_1133 NC_008149.1 Protein Homology CDS 1300211 1301410 . - 0 ID=cds1160;Parent=gene1210;Dbxref=Genbank:WP_002212210.1;Name=WP_002212210.1;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=WP_002212210.1;transl_table=11 NC_008149.1 RefSeq gene 1302086 1303057 . - . ID=gene1211;Name=YPN_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06060;old_locus_tag=YPN_1134 NC_008149.1 Protein Homology CDS 1302086 1303057 . - 0 ID=cds1161;Parent=gene1211;Dbxref=Genbank:WP_002212211.1;Name=WP_002212211.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002212211.1;transl_table=11 NC_008149.1 RefSeq gene 1303182 1305332 . - . ID=gene1212;Name=YPN_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06065;old_locus_tag=YPN_1135 NC_008149.1 Protein Homology CDS 1303182 1305332 . - 0 ID=cds1162;Parent=gene1212;Dbxref=Genbank:WP_002212212.1;Name=WP_002212212.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002212212.1;transl_table=11 NC_008149.1 RefSeq gene 1305314 1305718 . - . ID=gene1213;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=YPN_RS06070;old_locus_tag=YPN_1136 NC_008149.1 Protein Homology CDS 1305314 1305718 . - 0 ID=cds1163;Parent=gene1213;Dbxref=Genbank:WP_002215935.1;Name=WP_002215935.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=protein NrdI;protein_id=WP_002215935.1;transl_table=11 NC_008149.1 RefSeq gene 1305732 1305968 . - . ID=gene1214;Name=YPN_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06075;old_locus_tag=YPN_1137 NC_008149.1 Protein Homology CDS 1305732 1305968 . - 0 ID=cds1164;Parent=gene1214;Dbxref=Genbank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002212214.1;transl_table=11 NC_008149.1 RefSeq gene 1306472 1306837 . + . ID=gene1215;Name=YPN_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06080;old_locus_tag=YPN_1138 NC_008149.1 Protein Homology CDS 1306472 1306837 . + 0 ID=cds1165;Parent=gene1215;Dbxref=Genbank:WP_002212215.1;Name=WP_002212215.1;gbkey=CDS;product=acid shock protein;protein_id=WP_002212215.1;transl_table=11 NC_008149.1 RefSeq gene 1307315 1307650 . + . ID=gene1216;Name=YPN_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06085;old_locus_tag=YPN_1139 NC_008149.1 Protein Homology CDS 1307315 1307650 . + 0 ID=cds1166;Parent=gene1216;Dbxref=Genbank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212216.1;transl_table=11 NC_008149.1 RefSeq gene 1307748 1308197 . - . ID=gene1217;Name=YPN_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06090;old_locus_tag=YPN_1140 NC_008149.1 Protein Homology CDS 1307748 1308197 . - 0 ID=cds1167;Parent=gene1217;Dbxref=Genbank:WP_002212217.1;Name=WP_002212217.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212217.1;transl_table=11 NC_008149.1 RefSeq gene 1308362 1308700 . - . ID=gene1218;Name=YPN_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06095;old_locus_tag=YPN_1141 NC_008149.1 Protein Homology CDS 1308362 1308700 . - 0 ID=cds1168;Parent=gene1218;Dbxref=Genbank:WP_002224857.1;Name=WP_002224857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224857.1;transl_table=11 NC_008149.1 cmsearch region 1309030 1309491 . + . ID=id125;Note=cspA;gbkey=misc_feature NC_008149.1 RefSeq gene 1309208 1309420 . + . ID=gene1219;Name=YPN_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06100;old_locus_tag=YPN_1142 NC_008149.1 Protein Homology CDS 1309208 1309420 . + 0 ID=cds1169;Parent=gene1219;Dbxref=Genbank:WP_002212220.1;Name=WP_002212220.1;gbkey=CDS;product=cold-shock protein CspB;protein_id=WP_002212220.1;transl_table=11 NC_008149.1 RefSeq gene 1310220 1311797 . + . ID=gene1220;Name=YPN_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06105;old_locus_tag=YPN_1143 NC_008149.1 Protein Homology CDS 1310220 1311797 . + 0 ID=cds1170;Parent=gene1220;Dbxref=Genbank:WP_002215276.1;Name=WP_002215276.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002215276.1;transl_table=11 NC_008149.1 RefSeq gene 1311782 1312765 . + . ID=gene1221;Name=YPN_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06110;old_locus_tag=YPN_1144 NC_008149.1 Protein Homology CDS 1311782 1312765 . + 0 ID=cds1171;Parent=gene1221;Dbxref=Genbank:WP_002354495.1;Name=WP_002354495.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002354495.1;transl_table=11 NC_008149.1 RefSeq gene 1312762 1313568 . + . ID=gene1222;Name=YPN_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06115;old_locus_tag=YPN_1145 NC_008149.1 Protein Homology CDS 1312762 1313568 . + 0 ID=cds1172;Parent=gene1222;Dbxref=Genbank:WP_002212224.1;Name=WP_002212224.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002212224.1;transl_table=11 NC_008149.1 RefSeq gene 1313568 1314374 . + . ID=gene1223;Name=YPN_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06120;old_locus_tag=YPN_1146 NC_008149.1 Protein Homology CDS 1313568 1314374 . + 0 ID=cds1173;Parent=gene1223;Dbxref=Genbank:WP_002212225.1;Name=WP_002212225.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002212225.1;transl_table=11 NC_008149.1 RefSeq gene 1314367 1315032 . + . ID=gene1224;Name=YPN_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06125;old_locus_tag=YPN_1147 NC_008149.1 Protein Homology CDS 1314367 1315032 . + 0 ID=cds1174;Parent=gene1224;Dbxref=Genbank:WP_002212226.1;Name=WP_002212226.1;gbkey=CDS;product=nickel ABC transporter ATP-binding protein;protein_id=WP_002212226.1;transl_table=11 NC_008149.1 RefSeq gene 1316230 1316532 . + . ID=gene1225;Name=YPN_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06130;old_locus_tag=YPN_1149 NC_008149.1 Protein Homology CDS 1316230 1316532 . + 0 ID=cds1175;Parent=gene1225;Dbxref=Genbank:WP_002215288.1;Name=WP_002215288.1;gbkey=CDS;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11 NC_008149.1 RefSeq gene 1316585 1317019 . + . ID=gene1226;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=YPN_RS06135;old_locus_tag=YPN_1150 NC_008149.1 Protein Homology CDS 1316585 1317019 . + 0 ID=cds1176;Parent=gene1226;Dbxref=Genbank:WP_002212228.1;Name=WP_002212228.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta);gbkey=CDS;gene=ureB;product=urease subunit beta;protein_id=WP_002212228.1;transl_table=11 NC_008149.1 RefSeq gene 1317109 1318827 . + . ID=gene1227;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=YPN_RS06140;old_locus_tag=YPN_1151 NC_008149.1 Protein Homology CDS 1317109 1318827 . + 0 ID=cds1177;Parent=gene1227;Dbxref=Genbank:WP_002212229.1;Name=WP_002212229.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11 NC_008149.1 RefSeq gene 1319123 1319818 . + . ID=gene1228;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=YPN_RS06145;old_locus_tag=YPN_1152 NC_008149.1 Protein Homology CDS 1319123 1319818 . + 0 ID=cds1178;Parent=gene1228;Dbxref=Genbank:WP_002212230.1;Name=WP_002212230.1;Note=involved in the assembly of the urease metallocenter%3B possible nickel donor;gbkey=CDS;gene=ureE;product=urease accessory protein UreE;protein_id=WP_002212230.1;transl_table=11 NC_008149.1 RefSeq gene 1319840 1320526 . + . ID=gene1229;Name=YPN_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06150;old_locus_tag=YPN_1153 NC_008149.1 Protein Homology CDS 1319840 1320526 . + 0 ID=cds1179;Parent=gene1229;Dbxref=Genbank:WP_002212231.1;Name=WP_002212231.1;gbkey=CDS;product=urease accessory protein UreF;protein_id=WP_002212231.1;transl_table=11 NC_008149.1 RefSeq gene 1320653 1321315 . + . ID=gene1230;Name=YPN_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06155;old_locus_tag=YPN_1154 NC_008149.1 Protein Homology CDS 1320653 1321315 . + 0 ID=cds1180;Parent=gene1230;Dbxref=Genbank:WP_002212232.1;Name=WP_002212232.1;gbkey=CDS;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11 NC_008149.1 RefSeq gene 1321312 1322145 . + . ID=gene1231;Name=YPN_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06160;old_locus_tag=YPN_1155 NC_008149.1 Protein Homology CDS 1321312 1322145 . + 0 ID=cds1181;Parent=gene1231;Dbxref=Genbank:WP_002228375.1;Name=WP_002228375.1;gbkey=CDS;product=urease accessory protein UreD;protein_id=WP_002228375.1;transl_table=11 NC_008149.1 RefSeq gene 1322470 1323462 . + . ID=gene1232;Name=YPN_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06165;old_locus_tag=YPN_1157 NC_008149.1 Protein Homology CDS 1322470 1323462 . + 0 ID=cds1182;Parent=gene1232;Dbxref=Genbank:WP_002212233.1;Name=WP_002212233.1;gbkey=CDS;product=urea transporter;protein_id=WP_002212233.1;transl_table=11 NC_008149.1 RefSeq gene 1323611 1324669 . + . ID=gene1233;Name=YPN_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06170;old_locus_tag=YPN_1158 NC_008149.1 Protein Homology CDS 1323611 1324669 . + 0 ID=cds1183;Parent=gene1233;Dbxref=Genbank:WP_002212234.1;Name=WP_002212234.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002212234.1;transl_table=11 NC_008149.1 RefSeq gene 1324838 1325167 . - . ID=gene1234;Name=YPN_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06175;old_locus_tag=YPN_1159 NC_008149.1 Protein Homology CDS 1324838 1325167 . - 0 ID=cds1184;Parent=gene1234;Dbxref=Genbank:WP_002212235.1;Name=WP_002212235.1;gbkey=CDS;product=acid-resistance protein;protein_id=WP_002212235.1;transl_table=11 NC_008149.1 RefSeq gene 1325166 1325396 . + . ID=gene1235;Name=YPN_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06180 NC_008149.1 Protein Homology CDS 1325166 1325396 . + 0 ID=cds1185;Parent=gene1235;Dbxref=Genbank:WP_002215289.1;Name=WP_002215289.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215289.1;transl_table=11 NC_008149.1 RefSeq gene 1325785 1326960 . + . ID=gene1236;Name=YPN_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06185;old_locus_tag=YPN_1160 NC_008149.1 Protein Homology CDS 1325785 1326960 . + 0 ID=cds1186;Parent=gene1236;Dbxref=Genbank:WP_002212236.1;Name=WP_002212236.1;gbkey=CDS;product=voltage-gated potassium channel;protein_id=WP_002212236.1;transl_table=11 NC_008149.1 RefSeq gene 1327058 1327462 . - . ID=gene1237;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=YPN_RS06190;old_locus_tag=YPN_1161 NC_008149.1 Protein Homology CDS 1327058 1327462 . - 0 ID=cds1187;Parent=gene1237;Dbxref=Genbank:WP_002212237.1;Name=WP_002212237.1;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;gbkey=CDS;gene=ccrB;product=camphor resistance protein CrcB;protein_id=WP_002212237.1;transl_table=11 NC_008149.1 RefSeq gene 1327478 1327858 . - . ID=gene1238;Name=YPN_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06195;old_locus_tag=YPN_1162 NC_008149.1 Protein Homology CDS 1327478 1327858 . - 0 ID=cds1188;Parent=gene1238;Dbxref=Genbank:WP_002212238.1;Name=WP_002212238.1;gbkey=CDS;product=chromosome condensation protein CrcB;protein_id=WP_002212238.1;transl_table=11 NC_008149.1 RefSeq gene 1327947 1328126 . - . ID=gene1239;Name=YPN_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06200;old_locus_tag=YPN_1163 NC_008149.1 Protein Homology CDS 1327947 1328126 . - 0 ID=cds1189;Parent=gene1239;Dbxref=Genbank:WP_002212239.1;Name=WP_002212239.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212239.1;transl_table=11 NC_008149.1 RefSeq gene 1328899 1329216 . + . ID=gene1240;Name=YPN_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06205;old_locus_tag=YPN_1164 NC_008149.1 Protein Homology CDS 1328899 1329216 . + 0 ID=cds1190;Parent=gene1240;Dbxref=Genbank:WP_002212240.1;Name=WP_002212240.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIB;protein_id=WP_002212240.1;transl_table=11 NC_008149.1 RefSeq gene 1329227 1330588 . + . ID=gene1241;Name=YPN_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06210;old_locus_tag=YPN_1165 NC_008149.1 Protein Homology CDS 1329227 1330588 . + 0 ID=cds1191;Parent=gene1241;Dbxref=Genbank:WP_002212241.1;Name=WP_002212241.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIC;protein_id=WP_002212241.1;transl_table=11 NC_008149.1 RefSeq gene 1330755 1331102 . + . ID=gene1242;Name=YPN_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06215;old_locus_tag=YPN_1166 NC_008149.1 Protein Homology CDS 1330755 1331102 . + 0 ID=cds1192;Parent=gene1242;Dbxref=Genbank:WP_002212242.1;Name=WP_002212242.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;product=PTS N'-diacetylchitobiose transporter subunit IIA;protein_id=WP_002212242.1;transl_table=11 NC_008149.1 RefSeq gene 1331151 1331981 . + . ID=gene1243;Name=YPN_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06220;old_locus_tag=YPN_1167 NC_008149.1 Protein Homology CDS 1331151 1331981 . + 0 ID=cds1193;Parent=gene1243;Dbxref=Genbank:WP_002212243.1;Name=WP_002212243.1;Note=represses the celABCDF-ydjC operon involved in carbon uptake;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212243.1;transl_table=11 NC_008149.1 RefSeq gene 1332033 1332794 . + . ID=gene1244;Name=YPN_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06225;old_locus_tag=YPN_1168 NC_008149.1 Protein Homology CDS 1332033 1332794 . + 0 ID=cds1194;Parent=gene1244;Dbxref=Genbank:WP_002212244.1;Name=WP_002212244.1;gbkey=CDS;product=chitooligosaccharide deacetylase;protein_id=WP_002212244.1;transl_table=11 NC_008149.1 RefSeq gene 1332801 1332977 . - . ID=gene1245;Name=YPN_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06230 NC_008149.1 Protein Homology CDS 1332801 1332977 . - 0 ID=cds1195;Parent=gene1245;Dbxref=Genbank:WP_002212245.1;Name=WP_002212245.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212245.1;transl_table=11 NC_008149.1 RefSeq gene 1333089 1333457 . - . ID=gene1246;Name=YPN_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06235;old_locus_tag=YPN_1169 NC_008149.1 Protein Homology CDS 1333089 1333457 . - 0 ID=cds1196;Parent=gene1246;Dbxref=Genbank:WP_002212246.1;Name=WP_002212246.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212246.1;transl_table=11 NC_008149.1 RefSeq gene 1333952 1334479 . + . ID=gene1247;Name=YPN_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06240;old_locus_tag=YPN_1170 NC_008149.1 Protein Homology CDS 1333952 1334479 . + 0 ID=cds1197;Parent=gene1247;Dbxref=Genbank:WP_002212248.1;Name=WP_002212248.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;product=N-carbamyl-L-amino acid amidohydrolase;protein_id=WP_002212248.1;transl_table=11 NC_008149.1 RefSeq gene 1334552 1336195 . + . ID=gene1248;Name=YPN_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06245;old_locus_tag=YPN_1171 NC_008149.1 Protein Homology CDS 1334552 1336195 . + 0 ID=cds1198;Parent=gene1248;Dbxref=Genbank:WP_002216360.1;Name=WP_002216360.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;product=phosphoglucomutase;protein_id=WP_002216360.1;transl_table=11 NC_008149.1 RefSeq gene 1336413 1336526 . + . ID=gene1249;Name=YPN_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06250;old_locus_tag=YPN_1172 NC_008149.1 Protein Homology CDS 1336413 1336526 . + 0 ID=cds1199;Parent=gene1249;Dbxref=Genbank:WP_002216362.1;Name=WP_002216362.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216362.1;transl_table=11 NC_008149.1 RefSeq gene 1336569 1336811 . + . ID=gene1250;Name=YPN_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06255;old_locus_tag=YPN_1173 NC_008149.1 Protein Homology CDS 1336569 1336811 . + 0 ID=cds1200;Parent=gene1250;Dbxref=Genbank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11 NC_008149.1 RefSeq gene 1336939 1337367 . - . ID=gene1251;Name=YPN_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06260;old_locus_tag=YPN_1174 NC_008149.1 Protein Homology CDS 1336939 1337367 . - 0 ID=cds1201;Parent=gene1251;Dbxref=Genbank:WP_002209647.1;Name=WP_002209647.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209647.1;transl_table=11 NC_008149.1 RefSeq gene 1337462 1338148 . - . ID=gene1252;Name=YPN_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06265;old_locus_tag=YPN_1175 NC_008149.1 Protein Homology CDS 1337462 1338148 . - 0 ID=cds1202;Parent=gene1252;Dbxref=Genbank:WP_029562574.1;Name=WP_029562574.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_029562574.1;transl_table=11 NC_008149.1 RefSeq gene 1338384 1341110 . - . ID=gene1253;Name=YPN_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06270;old_locus_tag=YPN_1176 NC_008149.1 Protein Homology CDS 1338384 1341110 . - 0 ID=cds1203;Parent=gene1253;Dbxref=Genbank:WP_002209649.1;Name=WP_002209649.1;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;gbkey=CDS;product=two-component system sensor histidine kinase KdpD;protein_id=WP_002209649.1;transl_table=11 NC_008149.1 RefSeq gene 1341120 1341770 . - . ID=gene1254;Name=YPN_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06275;old_locus_tag=YPN_1177 NC_008149.1 Protein Homology CDS 1341120 1341770 . - 0 ID=cds1204;Parent=gene1254;Dbxref=Genbank:WP_002224856.1;Name=WP_002224856.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=WP_002224856.1;transl_table=11 NC_008149.1 RefSeq gene 1341934 1344000 . - . ID=gene1255;Name=YPN_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06280;old_locus_tag=YPN_1178 NC_008149.1 Protein Homology CDS 1341934 1344000 . - 0 ID=cds1205;Parent=gene1255;Dbxref=Genbank:WP_002209651.1;Name=WP_002209651.1;Note=One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase B chain;protein_id=WP_002209651.1;transl_table=11 NC_008149.1 RefSeq gene 1344094 1345782 . - . ID=gene1256;Name=YPN_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06285;old_locus_tag=YPN_1179 NC_008149.1 Protein Homology CDS 1344094 1345782 . - 0 ID=cds1206;Parent=gene1256;Dbxref=Genbank:WP_002209652.1;Name=WP_002209652.1;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;product=potassium-transporting ATPase A chain;protein_id=WP_002209652.1;transl_table=11 NC_008149.1 RefSeq gene 1345783 1345872 . - . ID=gene1257;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=YPN_RS06290;old_locus_tag=YPN_1180 NC_008149.1 Protein Homology CDS 1345783 1345872 . - 0 ID=cds1207;Parent=gene1257;Dbxref=Genbank:WP_002216016.1;Name=WP_002216016.1;Note=one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;gbkey=CDS;gene=kdpF;product=potassium transporter TrkA;protein_id=WP_002216016.1;transl_table=11 NC_008149.1 RefSeq gene 1345869 1346111 . - . ID=gene1258;Name=YPN_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06295 NC_008149.1 Protein Homology CDS 1345869 1346111 . - 0 ID=cds1208;Parent=gene1258;Dbxref=Genbank:WP_002216017.1;Name=WP_002216017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216017.1;transl_table=11 NC_008149.1 RefSeq gene 1346277 1346483 . + . ID=gene1259;Name=YPN_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06300;old_locus_tag=YPN_1181 NC_008149.1 Protein Homology CDS 1346277 1346483 . + 0 ID=cds1209;Parent=gene1259;Dbxref=Genbank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209653.1;transl_table=11 NC_008149.1 RefSeq gene 1346822 1347304 . + . ID=gene1260;Name=YPN_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06305;old_locus_tag=YPN_1182 NC_008149.1 Protein Homology CDS 1346822 1347304 . + 0 ID=cds1210;Parent=gene1260;Dbxref=Genbank:WP_002209654.1;Name=WP_002209654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209654.1;transl_table=11 NC_008149.1 RefSeq gene 1347434 1348897 . + . ID=gene1261;Name=YPN_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06310;old_locus_tag=YPN_1183 NC_008149.1 Protein Homology CDS 1347434 1348897 . + 0 ID=cds1211;Parent=gene1261;Dbxref=Genbank:WP_002209655.1;Name=WP_002209655.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_002209655.1;transl_table=11 NC_008149.1 RefSeq gene 1348888 1349925 . + . ID=gene1262;Name=YPN_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06315;old_locus_tag=YPN_1184 NC_008149.1 Protein Homology CDS 1348888 1349925 . + 0 ID=cds1212;Parent=gene1262;Dbxref=Genbank:WP_002209656.1;Name=WP_002209656.1;gbkey=CDS;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=WP_002209656.1;transl_table=11 NC_008149.1 RefSeq gene 1350068 1350811 . + . ID=gene1263;Name=YPN_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06320;old_locus_tag=YPN_1185 NC_008149.1 Protein Homology CDS 1350068 1350811 . + 0 ID=cds1213;Parent=gene1263;Dbxref=Genbank:WP_002354507.1;Name=WP_002354507.1;gbkey=CDS;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_002354507.1;transl_table=11 NC_008149.1 RefSeq gene 1351430 1352086 . + . ID=gene1264;Name=YPN_RS06325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS06325;old_locus_tag=YPN_1186;pseudo=true NC_008149.1 Protein Homology CDS 1351430 1352086 . + 0 ID=cds1214;Parent=gene1264;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:1351973..1351975%2Caa:Other);transl_table=11 NC_008149.1 RefSeq gene 1352080 1353030 . + . ID=gene1265;Name=YPN_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06330;old_locus_tag=YPN_1187 NC_008149.1 Protein Homology CDS 1352080 1353030 . + 0 ID=cds1215;Parent=gene1265;Dbxref=Genbank:WP_002209658.1;Name=WP_002209658.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209658.1;transl_table=11 NC_008149.1 RefSeq gene 1353027 1353764 . + . ID=gene1266;Name=YPN_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06335;old_locus_tag=YPN_1188 NC_008149.1 Protein Homology CDS 1353027 1353764 . + 0 ID=cds1216;Parent=gene1266;Dbxref=Genbank:WP_002209659.1;Name=WP_002209659.1;gbkey=CDS;product=LamB/YcsF family protein;protein_id=WP_002209659.1;transl_table=11 NC_008149.1 RefSeq gene 1353849 1354580 . + . ID=gene1267;Name=YPN_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06340;old_locus_tag=YPN_1189 NC_008149.1 Protein Homology CDS 1353849 1354580 . + 0 ID=cds1217;Parent=gene1267;Dbxref=Genbank:WP_002209660.1;Name=WP_002209660.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209660.1;transl_table=11 NC_008149.1 RefSeq gene 1354577 1355596 . + . ID=gene1268;Name=YPN_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06345;old_locus_tag=YPN_1190 NC_008149.1 Protein Homology CDS 1354577 1355596 . + 0 ID=cds1218;Parent=gene1268;Dbxref=Genbank:WP_002209661.1;Name=WP_002209661.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209661.1;transl_table=11 NC_008149.1 RefSeq gene 1355606 1356253 . + . ID=gene1269;Name=YPN_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06350;old_locus_tag=YPN_1191 NC_008149.1 Protein Homology CDS 1355606 1356253 . + 0 ID=cds1219;Parent=gene1269;Dbxref=Genbank:WP_002209662.1;Name=WP_002209662.1;gbkey=CDS;product=pyrrolidone-carboxylate peptidase;protein_id=WP_002209662.1;transl_table=11 NC_008149.1 RefSeq gene 1356344 1357030 . - . ID=gene1270;Name=YPN_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06355;old_locus_tag=YPN_1192 NC_008149.1 Protein Homology CDS 1356344 1357030 . - 0 ID=cds1220;Parent=gene1270;Dbxref=Genbank:WP_002209663.1;Name=WP_002209663.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=WP_002209663.1;transl_table=11 NC_008149.1 RefSeq gene 1357383 1357766 . + . ID=gene1271;Name=YPN_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06360;old_locus_tag=YPN_1193 NC_008149.1 Protein Homology CDS 1357383 1357766 . + 0 ID=cds1221;Parent=gene1271;Dbxref=Genbank:WP_002209664.1;Name=WP_002209664.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11 NC_008149.1 RefSeq gene 1357945 1358907 . + . ID=gene1272;Name=YPN_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06365;old_locus_tag=YPN_1194 NC_008149.1 Protein Homology CDS 1357945 1358907 . + 0 ID=cds1222;Parent=gene1272;Dbxref=Genbank:WP_002209665.1;Name=WP_002209665.1;gbkey=CDS;product=phospholipase A;protein_id=WP_002209665.1;transl_table=11 NC_008149.1 RefSeq gene 1358900 1358998 . + . ID=gene1273;Name=YPN_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06370 NC_008149.1 Protein Homology CDS 1358900 1358998 . + 0 ID=cds1223;Parent=gene1273;Dbxref=Genbank:WP_002228379.1;Name=WP_002228379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228379.1;transl_table=11 NC_008149.1 RefSeq gene 1358985 1359641 . + . ID=gene1274;Name=YPN_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06375;old_locus_tag=YPN_1195 NC_008149.1 Protein Homology CDS 1358985 1359641 . + 0 ID=cds1224;Parent=gene1274;Dbxref=Genbank:WP_002209667.1;Name=WP_002209667.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209667.1;transl_table=11 NC_008149.1 RefSeq gene 1359772 1361097 . - . ID=gene1275;Name=YPN_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06380;old_locus_tag=YPN_1196 NC_008149.1 Protein Homology CDS 1359772 1361097 . - 0 ID=cds1225;Parent=gene1275;Dbxref=Genbank:WP_002209669.1;Name=WP_002209669.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=WP_002209669.1;transl_table=11 NC_008149.1 RefSeq gene 1361349 1362095 . + . ID=gene1276;Name=YPN_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06385;old_locus_tag=YPN_1197 NC_008149.1 Protein Homology CDS 1361349 1362095 . + 0 ID=cds1226;Parent=gene1276;Dbxref=Genbank:WP_002209670.1;Name=WP_002209670.1;gbkey=CDS;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002209670.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1362163 1362339 . + . ID=id126;gbkey=repeat_region NC_008149.1 RefSeq gene 1362378 1364015 . - . ID=gene1277;Name=YPN_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06390;old_locus_tag=YPN_1198 NC_008149.1 Protein Homology CDS 1362378 1364015 . - 0 ID=cds1227;Parent=gene1277;Dbxref=Genbank:WP_002217781.1;Name=WP_002217781.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_002217781.1;transl_table=11 NC_008149.1 RefSeq gene 1364203 1364778 . + . ID=gene1278;Name=YPN_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06395;old_locus_tag=YPN_1199 NC_008149.1 Protein Homology CDS 1364203 1364778 . + 0 ID=cds1228;Parent=gene1278;Dbxref=Genbank:WP_002209672.1;Name=WP_002209672.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;product=RNA polymerase sigma factor AlgU;protein_id=WP_002209672.1;transl_table=11 NC_008149.1 RefSeq gene 1364804 1365460 . + . ID=gene1279;Name=YPN_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06400;old_locus_tag=YPN_1200 NC_008149.1 Protein Homology CDS 1364804 1365460 . + 0 ID=cds1229;Parent=gene1279;Dbxref=Genbank:WP_002209673.1;Name=WP_002209673.1;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=WP_002209673.1;transl_table=11 NC_008149.1 RefSeq gene 1365460 1366416 . + . ID=gene1280;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=YPN_RS06405;old_locus_tag=YPN_1201 NC_008149.1 Protein Homology CDS 1365460 1366416 . + 0 ID=cds1230;Parent=gene1280;Dbxref=Genbank:WP_002209674.1;Name=WP_002209674.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=anti-sigma E factor;protein_id=WP_002209674.1;transl_table=11 NC_008149.1 RefSeq gene 1366413 1366868 . + . ID=gene1281;Name=YPN_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06410;old_locus_tag=YPN_1202 NC_008149.1 Protein Homology CDS 1366413 1366868 . + 0 ID=cds1231;Parent=gene1281;Dbxref=Genbank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11 NC_008149.1 RefSeq gene 1366889 1367743 . - . ID=gene1282;Name=YPN_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06415;old_locus_tag=YPN_1203 NC_008149.1 Protein Homology CDS 1366889 1367743 . - 0 ID=cds1232;Parent=gene1282;Dbxref=Genbank:WP_002209676.1;Name=WP_002209676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209676.1;transl_table=11 NC_008149.1 RefSeq gene 1368243 1370042 . + . ID=gene1283;Name=YPN_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06420;old_locus_tag=YPN_1204 NC_008149.1 Protein Homology CDS 1368243 1370042 . + 0 ID=cds1233;Parent=gene1283;Dbxref=Genbank:WP_002209677.1;Name=WP_002209677.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_002209677.1;transl_table=11 NC_008149.1 RefSeq gene 1370052 1371050 . + . ID=gene1284;Name=YPN_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06425;old_locus_tag=YPN_1205 NC_008149.1 Protein Homology CDS 1370052 1371050 . + 0 ID=cds1234;Parent=gene1284;Dbxref=Genbank:WP_002209678.1;Name=WP_002209678.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase I;protein_id=WP_002209678.1;transl_table=11 NC_008149.1 RefSeq gene 1371402 1372082 . + . ID=gene1285;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=YPN_RS06430;old_locus_tag=YPN_1206 NC_008149.1 Protein Homology CDS 1371402 1372082 . + 0 ID=cds1235;Parent=gene1285;Dbxref=Genbank:WP_002209679.1;Name=WP_002209679.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease 3;protein_id=WP_002209679.1;transl_table=11 NC_008149.1 RefSeq gene 1372079 1372990 . + . ID=gene1286;Name=YPN_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06435;old_locus_tag=YPN_1207 NC_008149.1 Protein Homology CDS 1372079 1372990 . + 0 ID=cds1236;Parent=gene1286;Dbxref=Genbank:WP_002214829.1;Name=WP_002214829.1;gbkey=CDS;product=GTPase Era;protein_id=WP_002214829.1;transl_table=11 NC_008149.1 RefSeq gene 1373000 1373725 . + . ID=gene1287;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=YPN_RS06440;old_locus_tag=YPN_1208 NC_008149.1 Protein Homology CDS 1373000 1373725 . + 0 ID=cds1237;Parent=gene1287;Dbxref=Genbank:WP_002209680.1;Name=WP_002209680.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11 NC_008149.1 RefSeq gene 1373884 1374615 . + . ID=gene1288;Name=YPN_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06445;old_locus_tag=YPN_1209 NC_008149.1 Protein Homology CDS 1373884 1374615 . + 0 ID=cds1238;Parent=gene1288;Dbxref=Genbank:WP_002211569.1;Name=WP_002211569.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;product=pyridoxine 5'-phosphate synthase;protein_id=WP_002211569.1;transl_table=11 NC_008149.1 RefSeq gene 1374615 1374995 . + . ID=gene1289;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=YPN_RS06450;old_locus_tag=YPN_1210 NC_008149.1 Protein Homology CDS 1374615 1374995 . + 0 ID=cds1239;Parent=gene1289;Dbxref=Genbank:WP_002211568.1;Name=WP_002211568.1;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;gbkey=CDS;gene=acpS;product=holo-ACP synthase;protein_id=WP_002211568.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1375048 1375765 . + . ID=id127;gbkey=repeat_region NC_008149.1 RefSeq gene 1375052 1375207 . + . ID=gene1290;Name=YPN_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06455 NC_008149.1 Protein Homology CDS 1375052 1375207 . + 0 ID=cds1240;Parent=gene1290;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 1375197 1375655 . + . ID=gene1291;Name=YPN_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06460;old_locus_tag=YPN_1211 NC_008149.1 Protein Homology CDS 1375197 1375655 . + 0 ID=cds1241;Parent=gene1291;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1375811 1376071 . - . ID=gene1292;Name=YPN_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06465;old_locus_tag=YPN_1212 NC_008149.1 Protein Homology CDS 1375811 1376071 . - 0 ID=cds1242;Parent=gene1292;Dbxref=Genbank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;product=ferredoxin;protein_id=WP_002211567.1;transl_table=11 NC_008149.1 RefSeq gene 1376233 1377072 . - . ID=gene1293;Name=YPN_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06470;old_locus_tag=YPN_1213 NC_008149.1 Protein Homology CDS 1376233 1377072 . - 0 ID=cds1243;Parent=gene1293;Dbxref=Genbank:WP_002211566.1;Name=WP_002211566.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211566.1;transl_table=11 NC_008149.1 RefSeq gene 1377280 1378167 . + . ID=gene1294;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=YPN_RS06475;old_locus_tag=YPN_1214 NC_008149.1 Protein Homology CDS 1377280 1378167 . + 0 ID=cds1244;Parent=gene1294;Dbxref=Genbank:WP_002211565.1;Name=WP_002211565.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11 NC_008149.1 RefSeq gene 1378394 1379089 . + . ID=gene1295;Name=YPN_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06480;old_locus_tag=YPN_1215 NC_008149.1 Protein Homology CDS 1378394 1379089 . + 0 ID=cds1245;Parent=gene1295;Dbxref=Genbank:WP_002211564.1;Name=WP_002211564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211564.1;transl_table=11 NC_008149.1 RefSeq gene 1379160 1379762 . + . ID=gene1296;Name=YPN_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06485;old_locus_tag=YPN_1216 NC_008149.1 Protein Homology CDS 1379160 1379762 . + 0 ID=cds1246;Parent=gene1296;Dbxref=Genbank:WP_002211563.1;Name=WP_002211563.1;gbkey=CDS;product=adenosine deaminase;protein_id=WP_002211563.1;transl_table=11 NC_008149.1 RefSeq gene 1379871 1381331 . - . ID=gene1297;Name=YPN_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06490;old_locus_tag=YPN_1217 NC_008149.1 Protein Homology CDS 1379871 1381331 . - 0 ID=cds1247;Parent=gene1297;Dbxref=Genbank:WP_002211562.1;Name=WP_002211562.1;gbkey=CDS;product=murein transglycosylase;protein_id=WP_002211562.1;transl_table=11 NC_008149.1 RefSeq gene 1381647 1385537 . + . ID=gene1298;Name=YPN_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06495;old_locus_tag=YPN_1218 NC_008149.1 Protein Homology CDS 1381647 1385537 . + 0 ID=cds1248;Parent=gene1298;Dbxref=Genbank:WP_002223376.1;Name=WP_002223376.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_002223376.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1385568 1385742 . + . ID=id128;gbkey=repeat_region NC_008149.1 RefSeq gene 1385949 1386398 . - . ID=gene1299;Name=YPN_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06500;old_locus_tag=YPN_1219 NC_008149.1 Protein Homology CDS 1385949 1386398 . - 0 ID=cds1249;Parent=gene1299;Dbxref=Genbank:WP_002211560.1;Name=WP_002211560.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211560.1;transl_table=11 NC_008149.1 RefSeq gene 1386850 1387410 . - . ID=gene1300;Name=YPN_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06505;old_locus_tag=YPN_1220 NC_008149.1 Protein Homology CDS 1386850 1387410 . - 0 ID=cds1250;Parent=gene1300;Dbxref=Genbank:WP_002211559.1;Name=WP_002211559.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211559.1;transl_table=11 NC_008149.1 RefSeq gene 1388429 1388647 . + . ID=gene1301;Name=YPN_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06510 NC_008149.1 Protein Homology CDS 1388429 1388647 . + 0 ID=cds1251;Parent=gene1301;Dbxref=Genbank:WP_042468836.1;Name=WP_042468836.1;gbkey=CDS;product=transposase;protein_id=WP_042468836.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1388485 1389206 . + . ID=id129;gbkey=repeat_region NC_008149.1 RefSeq gene 1388637 1389095 . + . ID=gene1302;Name=YPN_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06515;old_locus_tag=YPN_1221 NC_008149.1 Protein Homology CDS 1388637 1389095 . + 0 ID=cds1252;Parent=gene1302;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 1389316 1390752 . + . ID=gene1303;Name=YPN_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06520;old_locus_tag=YPN_1222 NC_008149.1 Protein Homology CDS 1389316 1390752 . + 0 ID=cds1253;Parent=gene1303;Dbxref=Genbank:WP_002216114.1;Name=WP_002216114.1;Note=part of the GlrKR two-component signal transduction system involved in the regulation of glmY;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002216114.1;transl_table=11 NC_008149.1 RefSeq gene 1390756 1391823 . + . ID=gene1304;Name=YPN_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06525;old_locus_tag=YPN_1223 NC_008149.1 Protein Homology CDS 1390756 1391823 . + 0 ID=cds1254;Parent=gene1304;Dbxref=Genbank:WP_002430124.1;Name=WP_002430124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002430124.1;transl_table=11 NC_008149.1 RefSeq gene 1391786 1393123 . + . ID=gene1305;Name=YPN_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06530;old_locus_tag=YPN_1224 NC_008149.1 Protein Homology CDS 1391786 1393123 . + 0 ID=cds1255;Parent=gene1305;Dbxref=Genbank:WP_002211556.1;Name=WP_002211556.1;Note=with GlrK is part of a two-component signal transduction system regulating glmY;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211556.1;transl_table=11 NC_008149.1 RefSeq gene 1393283 1394905 . + . ID=gene1306;Name=YPN_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06535;old_locus_tag=YPN_1225 NC_008149.1 Protein Homology CDS 1393283 1394905 . + 0 ID=cds1256;Parent=gene1306;Dbxref=Genbank:WP_002211555.1;Name=WP_002211555.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;product=NAD synthetase;protein_id=WP_002211555.1;transl_table=11 NC_008149.1 RefSeq gene 1394920 1395258 . + . ID=gene1307;Name=YPN_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06540;old_locus_tag=YPN_1226 NC_008149.1 Protein Homology CDS 1394920 1395258 . + 0 ID=cds1257;Parent=gene1307;Dbxref=Genbank:WP_002211554.1;Name=WP_002211554.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=WP_002211554.1;transl_table=11 NC_008149.1 RefSeq gene 1395427 1395798 . - . ID=gene1308;Name=YPN_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06545;old_locus_tag=YPN_1227 NC_008149.1 Protein Homology CDS 1395427 1395798 . - 0 ID=cds1258;Parent=gene1308;Dbxref=Genbank:WP_002216118.1;Name=WP_002216118.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216118.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1395847 1397804 . + . ID=id130;gbkey=repeat_region NC_008149.1 RefSeq gene 1395916 1396695 . - . ID=gene1309;Name=YPN_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06550;old_locus_tag=YPN_1228 NC_008149.1 Protein Homology CDS 1395916 1396695 . - 0 ID=cds1259;Parent=gene1309;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 1396695 1397717 . - . ID=gene1310;Name=YPN_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06555;old_locus_tag=YPN_1229 NC_008149.1 Protein Homology CDS 1396695 1397717 . - 0 ID=cds1260;Parent=gene1310;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 1397798 1398286 . - . ID=gene1311;Name=YPN_RS06560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS06560;old_locus_tag=YPN_1230;partial=true;pseudo=true;start_range=.,1397798 NC_008149.1 Protein Homology CDS 1397798 1398286 . - 0 ID=cds1261;Parent=gene1311;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1397798;transl_table=11 NC_008149.1 RefSeq gene 1398750 1399940 . - . ID=gene1312;Name=YPN_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06565;old_locus_tag=YPN_1231 NC_008149.1 Protein Homology CDS 1398750 1399940 . - 0 ID=cds1262;Parent=gene1312;Dbxref=Genbank:WP_002211553.1;Name=WP_002211553.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;product=flavohemoprotein;protein_id=WP_002211553.1;transl_table=11 NC_008149.1 RefSeq gene 1400481 1401734 . + . ID=gene1313;Name=YPN_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06570;old_locus_tag=YPN_1232 NC_008149.1 Protein Homology CDS 1400481 1401734 . + 0 ID=cds1263;Parent=gene1313;Dbxref=Genbank:WP_002211552.1;Name=WP_002211552.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_002211552.1;transl_table=11 NC_008149.1 RefSeq gene 1401886 1402068 . + . ID=gene1314;Name=YPN_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06575 NC_008149.1 Protein Homology CDS 1401886 1402068 . + 0 ID=cds1264;Parent=gene1314;Dbxref=Genbank:WP_002223388.1;Name=WP_002223388.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223388.1;transl_table=11 NC_008149.1 RefSeq gene 1402187 1402726 . + . ID=gene1315;Name=YPN_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06580;old_locus_tag=YPN_1233 NC_008149.1 Protein Homology CDS 1402187 1402726 . + 0 ID=cds1265;Parent=gene1315;Dbxref=Genbank:WP_016257063.1;Name=WP_016257063.1;gbkey=CDS;product=attachment protein;protein_id=WP_016257063.1;transl_table=11 NC_008149.1 RefSeq gene 1403078 1404235 . + . ID=gene1316;Name=YPN_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06585;old_locus_tag=YPN_1234 NC_008149.1 Protein Homology CDS 1403078 1404235 . + 0 ID=cds1266;Parent=gene1316;Dbxref=Genbank:WP_002213316.1;Name=WP_002213316.1;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;gbkey=CDS;product=3-phenylpropionic acid transporter;protein_id=WP_002213316.1;transl_table=11 NC_008149.1 RefSeq gene 1404232 1405608 . - . ID=gene1317;Name=YPN_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06590;old_locus_tag=YPN_1235 NC_008149.1 Protein Homology CDS 1404232 1405608 . - 0 ID=cds1267;Parent=gene1317;Dbxref=Genbank:WP_002223390.1;Name=WP_002223390.1;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=WP_002223390.1;transl_table=11 NC_008149.1 RefSeq gene 1405750 1406424 . + . ID=gene1318;Name=YPN_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06595;old_locus_tag=YPN_1236 NC_008149.1 Protein Homology CDS 1405750 1406424 . + 0 ID=cds1268;Parent=gene1318;Dbxref=Genbank:WP_002213310.1;Name=WP_002213310.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213310.1;transl_table=11 NC_008149.1 RefSeq gene 1406415 1407437 . + . ID=gene1319;Name=YPN_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06600;old_locus_tag=YPN_1237 NC_008149.1 Protein Homology CDS 1406415 1407437 . + 0 ID=cds1269;Parent=gene1319;Dbxref=Genbank:WP_002213308.1;Name=WP_002213308.1;gbkey=CDS;product=nickel transporter;protein_id=WP_002213308.1;transl_table=11 NC_008149.1 RefSeq gene 1407536 1408339 . - . ID=gene1320;Name=YPN_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06605;old_locus_tag=YPN_1238 NC_008149.1 Protein Homology CDS 1407536 1408339 . - 0 ID=cds1270;Parent=gene1320;Dbxref=Genbank:WP_002213305.1;Name=WP_002213305.1;gbkey=CDS;product=inositol monophosphatase;protein_id=WP_002213305.1;transl_table=11 NC_008149.1 RefSeq gene 1408458 1409231 . + . ID=gene1321;Name=YPN_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06610;old_locus_tag=YPN_1239 NC_008149.1 Protein Homology CDS 1408458 1409231 . + 0 ID=cds1271;Parent=gene1321;Dbxref=Genbank:WP_002217034.1;Name=WP_002217034.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11 NC_008149.1 RefSeq gene 1409387 1409881 . + . ID=gene1322;Name=YPN_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06615;old_locus_tag=YPN_1240 NC_008149.1 Protein Homology CDS 1409387 1409881 . + 0 ID=cds1272;Parent=gene1322;Dbxref=Genbank:WP_002222202.1;Name=WP_002222202.1;gbkey=CDS;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002222202.1;transl_table=11 NC_008149.1 RefSeq gene 1409935 1411164 . + . ID=gene1323;Name=YPN_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06620;old_locus_tag=YPN_1241 NC_008149.1 Protein Homology CDS 1409935 1411164 . + 0 ID=cds1273;Parent=gene1323;Dbxref=Genbank:WP_002209836.1;Name=WP_002209836.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002209836.1;transl_table=11 NC_008149.1 RefSeq gene 1411195 1411581 . + . ID=gene1324;Name=YPN_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06625;old_locus_tag=YPN_1242 NC_008149.1 Protein Homology CDS 1411195 1411581 . + 0 ID=cds1274;Parent=gene1324;Dbxref=Genbank:WP_002209835.1;Name=WP_002209835.1;gbkey=CDS;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002209835.1;transl_table=11 NC_008149.1 RefSeq gene 1411851 1412174 . + . ID=gene1325;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=YPN_RS06630;old_locus_tag=YPN_1243 NC_008149.1 Protein Homology CDS 1411851 1412174 . + 0 ID=cds1275;Parent=gene1325;Dbxref=Genbank:WP_002209834.1;Name=WP_002209834.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-binding protein;protein_id=WP_002209834.1;transl_table=11 NC_008149.1 RefSeq gene 1412285 1412809 . + . ID=gene1326;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=YPN_RS06635;old_locus_tag=YPN_1244 NC_008149.1 Protein Homology CDS 1412285 1412809 . + 0 ID=cds1276;Parent=gene1326;Dbxref=Genbank:WP_002209833.1;Name=WP_002209833.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone protein HscB;protein_id=WP_002209833.1;transl_table=11 NC_008149.1 RefSeq gene 1413214 1415004 . + . ID=gene1327;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=YPN_RS06640;old_locus_tag=YPN_1245 NC_008149.1 Protein Homology CDS 1413214 1415004 . + 0 ID=cds1277;Parent=gene1327;Dbxref=Genbank:WP_042468833.1;Name=WP_042468833.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=WP_042468833.1;transl_table=11 NC_008149.1 RefSeq gene 1415007 1415342 . + . ID=gene1328;Name=YPN_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06645;old_locus_tag=YPN_1246 NC_008149.1 Protein Homology CDS 1415007 1415342 . + 0 ID=cds1278;Parent=gene1328;Dbxref=Genbank:WP_002209831.1;Name=WP_002209831.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002209831.1;transl_table=11 NC_008149.1 RefSeq gene 1415372 1415572 . + . ID=gene1329;Name=YPN_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06650;old_locus_tag=YPN_1247 NC_008149.1 Protein Homology CDS 1415372 1415572 . + 0 ID=cds1279;Parent=gene1329;Dbxref=Genbank:WP_002209830.1;Name=WP_002209830.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209830.1;transl_table=11 NC_008149.1 RefSeq gene 1415712 1417010 . + . ID=gene1330;Name=YPN_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06655;old_locus_tag=YPN_1248 NC_008149.1 Protein Homology CDS 1415712 1417010 . + 0 ID=cds1280;Parent=gene1330;Dbxref=Genbank:WP_002209829.1;Name=WP_002209829.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;product=peptidase B;protein_id=WP_002209829.1;transl_table=11 NC_008149.1 RefSeq gene 1417089 1418042 . + . ID=gene1331;Name=YPN_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06660;old_locus_tag=YPN_1249 NC_008149.1 Protein Homology CDS 1417089 1418042 . + 0 ID=cds1281;Parent=gene1331;Dbxref=Genbank:WP_002209828.1;Name=WP_002209828.1;gbkey=CDS;product=endopeptidase IV;protein_id=WP_002209828.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1418078 1418248 . + . ID=id131;gbkey=repeat_region NC_008149.1 RefSeq gene 1418380 1418700 . - . ID=gene1332;Name=YPN_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06665;old_locus_tag=YPN_1250 NC_008149.1 Protein Homology CDS 1418380 1418700 . - 0 ID=cds1282;Parent=gene1332;Dbxref=Genbank:WP_002215505.1;Name=WP_002215505.1;gbkey=CDS;product=autotransporter;protein_id=WP_002215505.1;transl_table=11 NC_008149.1 RefSeq gene 1418666 1421662 . - . ID=gene1333;Name=YPN_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06670;old_locus_tag=YPN_1251 NC_008149.1 Protein Homology CDS 1418666 1421662 . - 0 ID=cds1283;Parent=gene1333;Dbxref=Genbank:WP_002228388.1;Name=WP_002228388.1;gbkey=CDS;product=pertactin;protein_id=WP_002228388.1;transl_table=11 NC_008149.1 RefSeq gene 1422220 1426365 . - . ID=gene1334;Name=YPN_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06675;old_locus_tag=YPN_1252 NC_008149.1 Protein Homology CDS 1422220 1426365 . - 0 ID=cds1284;Parent=gene1334;Dbxref=Genbank:WP_002215510.1;Name=WP_002215510.1;gbkey=CDS;product=autotransporter;protein_id=WP_002215510.1;transl_table=11 NC_008149.1 RefSeq gene 1426880 1427137 . - . ID=gene1335;Name=YPN_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06680;old_locus_tag=YPN_1253 NC_008149.1 Protein Homology CDS 1426880 1427137 . - 0 ID=cds1285;Parent=gene1335;Dbxref=Genbank:WP_002215513.1;Name=WP_002215513.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215513.1;transl_table=11 NC_008149.1 RefSeq gene 1427312 1429732 . + . ID=gene1336;Name=YPN_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06685;old_locus_tag=YPN_1254 NC_008149.1 Protein Homology CDS 1427312 1429732 . + 0 ID=cds1286;Parent=gene1336;Dbxref=Genbank:WP_002215515.1;Name=WP_002215515.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215515.1;transl_table=11 NC_008149.1 RefSeq gene 1430059 1430487 . + . ID=gene1337;Name=YPN_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06690;old_locus_tag=YPN_1255 NC_008149.1 Protein Homology CDS 1430059 1430487 . + 0 ID=cds1287;Parent=gene1337;Dbxref=Genbank:WP_002209821.1;Name=WP_002209821.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_002209821.1;transl_table=11 NC_008149.1 RefSeq gene 1430749 1431945 . + . ID=gene1338;Name=YPN_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06695;old_locus_tag=YPN_1256 NC_008149.1 Protein Homology CDS 1430749 1431945 . + 0 ID=cds1288;Parent=gene1338;Dbxref=Genbank:WP_002209820.1;Name=WP_002209820.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_002209820.1;transl_table=11 NC_008149.1 RefSeq gene 1432099 1432848 . + . ID=gene1339;Name=YPN_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06700;old_locus_tag=YPN_1257 NC_008149.1 Protein Homology CDS 1432099 1432848 . + 0 ID=cds1289;Parent=gene1339;Dbxref=Genbank:WP_002209819.1;Name=WP_002209819.1;gbkey=CDS;product=pilus assembly protein PilW;protein_id=WP_002209819.1;transl_table=11 NC_008149.1 RefSeq gene 1432838 1433875 . + . ID=gene1340;Name=YPN_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06705;old_locus_tag=YPN_1258 NC_008149.1 Protein Homology CDS 1432838 1433875 . + 0 ID=cds1290;Parent=gene1340;Dbxref=Genbank:WP_002209818.1;Name=WP_002209818.1;gbkey=CDS;product=cytoskeleton protein RodZ;protein_id=WP_002209818.1;transl_table=11 NC_008149.1 RefSeq gene 1433937 1435064 . + . ID=gene1341;Name=YPN_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06710;old_locus_tag=YPN_1259 NC_008149.1 Protein Homology CDS 1433937 1435064 . + 0 ID=cds1291;Parent=gene1341;Dbxref=Genbank:WP_002209817.1;Name=WP_002209817.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);protein_id=WP_002209817.1;transl_table=11 NC_008149.1 RefSeq gene 1435273 1436547 . + . ID=gene1342;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=YPN_RS06715;old_locus_tag=YPN_1260 NC_008149.1 Protein Homology CDS 1435273 1436547 . + 0 ID=cds1292;Parent=gene1342;Dbxref=Genbank:WP_002209816.1;Name=WP_002209816.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=WP_002209816.1;transl_table=11 NC_008149.1 RefSeq gene 1436561 1437196 . + . ID=gene1343;Name=YPN_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06720;old_locus_tag=YPN_1261 NC_008149.1 Protein Homology CDS 1436561 1437196 . + 0 ID=cds1293;Parent=gene1343;Dbxref=Genbank:WP_002209815.1;Name=WP_002209815.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209815.1;transl_table=11 NC_008149.1 RefSeq gene 1437208 1438389 . + . ID=gene1344;Name=YPN_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06725;old_locus_tag=YPN_1262 NC_008149.1 Protein Homology CDS 1437208 1438389 . + 0 ID=cds1294;Parent=gene1344;Dbxref=Genbank:WP_002209814.1;Name=WP_002209814.1;gbkey=CDS;product=outer membrane protein assembly factor BamB;protein_id=WP_002209814.1;transl_table=11 NC_008149.1 RefSeq gene 1438537 1440024 . + . ID=gene1345;Name=YPN_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06730;old_locus_tag=YPN_1263 NC_008149.1 Protein Homology CDS 1438537 1440024 . + 0 ID=cds1295;Parent=gene1345;Dbxref=Genbank:WP_002209813.1;Name=WP_002209813.1;gbkey=CDS;product=GTPase Der;protein_id=WP_002209813.1;transl_table=11 NC_008149.1 RefSeq gene 1440371 1441327 . + . ID=gene1346;Name=YPN_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06735;old_locus_tag=YPN_1264 NC_008149.1 Protein Homology CDS 1440371 1441327 . + 0 ID=cds1296;Parent=gene1346;Dbxref=Genbank:WP_002209812.1;Name=WP_002209812.1;gbkey=CDS;product=transporter;protein_id=WP_002209812.1;transl_table=11 NC_008149.1 RefSeq gene 1441376 1441600 . + . ID=gene1347;Name=YPN_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06740;old_locus_tag=YPN_1265 NC_008149.1 Protein Homology CDS 1441376 1441600 . + 0 ID=cds1297;Parent=gene1347;Dbxref=Genbank:WP_002209811.1;Name=WP_002209811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209811.1;transl_table=11 NC_008149.1 RefSeq gene 1441717 1443096 . - . ID=gene1348;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=YPN_RS06745;old_locus_tag=YPN_1266 NC_008149.1 Protein Homology CDS 1441717 1443096 . - 0 ID=cds1298;Parent=gene1348;Dbxref=Genbank:WP_002209810.1;Name=WP_002209810.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease 7 large subunit;protein_id=WP_002209810.1;transl_table=11 NC_008149.1 RefSeq gene 1443266 1444729 . + . ID=gene1349;Name=YPN_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06750;old_locus_tag=YPN_1267 NC_008149.1 Protein Homology CDS 1443266 1444729 . + 0 ID=cds1299;Parent=gene1349;Dbxref=Genbank:WP_002227862.1;Name=WP_002227862.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_002227862.1;transl_table=11 NC_008149.1 RefSeq gene 1444801 1444926 . - . ID=gene1350;Name=YPN_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06755 NC_008149.1 Protein Homology CDS 1444801 1444926 . - 0 ID=cds1300;Parent=gene1350;Dbxref=Genbank:WP_002209808.1;Name=WP_002209808.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209808.1;transl_table=11 NC_008149.1 RefSeq gene 1444909 1446486 . + . ID=gene1351;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=YPN_RS06760;old_locus_tag=YPN_1268 NC_008149.1 Protein Homology CDS 1444909 1446486 . + 0 ID=cds1301;Parent=gene1351;Dbxref=Genbank:WP_002209807.1;Name=WP_002209807.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase [glutamine-hydrolyzing];protein_id=WP_002209807.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1446555 1446687 . + . ID=id132;gbkey=repeat_region NC_008149.1 RefSeq gene 1446698 1446871 . + . ID=gene1352;Name=YPN_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06765 NC_008149.1 Protein Homology CDS 1446698 1446871 . + 0 ID=cds1302;Parent=gene1352;Dbxref=Genbank:WP_025470750.1;Name=WP_025470750.1;gbkey=CDS;product=transposase;protein_id=WP_025470750.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1446708 1447430 . + . ID=id133;gbkey=repeat_region NC_008149.1 RefSeq gene 1446861 1447319 . + . ID=gene1353;Name=YPN_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06770;old_locus_tag=YPN_1269 NC_008149.1 Protein Homology CDS 1446861 1447319 . + 0 ID=cds1303;Parent=gene1353;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1447479 1447958 . - . ID=gene1354;Name=YPN_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06775;old_locus_tag=YPN_1270 NC_008149.1 Protein Homology CDS 1447479 1447958 . - 0 ID=cds1304;Parent=gene1354;Dbxref=Genbank:WP_002209806.1;Name=WP_002209806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209806.1;transl_table=11 NC_008149.1 RefSeq gene 1447982 1448380 . - . ID=gene1355;Name=YPN_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06780;old_locus_tag=YPN_1271 NC_008149.1 Protein Homology CDS 1447982 1448380 . - 0 ID=cds1305;Parent=gene1355;Dbxref=Genbank:WP_002216975.1;Name=WP_002216975.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216975.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1448400 1448545 . + . ID=id134;gbkey=repeat_region NC_008149.1 RefSeq gene 1448444 1448839 . - . ID=gene1356;Name=YPN_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06785;old_locus_tag=YPN_1272 NC_008149.1 Protein Homology CDS 1448444 1448839 . - 0 ID=cds1306;Parent=gene1356;Dbxref=Genbank:WP_002415472.1;Name=WP_002415472.1;gbkey=CDS;product=membrane protein;protein_id=WP_002415472.1;transl_table=11 NC_008149.1 RefSeq gene 1448901 1449296 . - . ID=gene1357;Name=YPN_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06790;old_locus_tag=YPN_1273 NC_008149.1 Protein Homology CDS 1448901 1449296 . - 0 ID=cds1307;Parent=gene1357;Dbxref=Genbank:WP_002216979.1;Name=WP_002216979.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216979.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1449316 1449461 . + . ID=id135;gbkey=repeat_region NC_008149.1 RefSeq gene 1449360 1449755 . - . ID=gene1358;Name=YPN_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06795 NC_008149.1 Protein Homology CDS 1449360 1449755 . - 0 ID=cds1308;Parent=gene1358;Dbxref=Genbank:WP_002216980.1;Name=WP_002216980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216980.1;transl_table=11 NC_008149.1 RefSeq gene 1449752 1450387 . - . ID=gene1359;Name=YPN_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06800;old_locus_tag=YPN_1274 NC_008149.1 Protein Homology CDS 1449752 1450387 . - 0 ID=cds1309;Parent=gene1359;Dbxref=Genbank:WP_002209805.1;Name=WP_002209805.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209805.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1450404 1451723 . + . ID=id136;gbkey=repeat_region NC_008149.1 RefSeq gene 1450478 1451686 . + . ID=gene1360;Name=YPN_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06805;old_locus_tag=YPN_1275 NC_008149.1 Protein Homology CDS 1450478 1451686 . + 0 ID=cds1310;Parent=gene1360;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 1451698 1451976 . - . ID=gene1361;Name=YPN_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06810;old_locus_tag=YPN_1276 NC_008149.1 Protein Homology CDS 1451698 1451976 . - 0 ID=cds1311;Parent=gene1361;Dbxref=Genbank:WP_002209804.1;Name=WP_002209804.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209804.1;transl_table=11 NC_008149.1 RefSeq gene 1452035 1452502 . - . ID=gene1362;Name=YPN_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06815;old_locus_tag=YPN_1277 NC_008149.1 Protein Homology CDS 1452035 1452502 . - 0 ID=cds1312;Parent=gene1362;Dbxref=Genbank:WP_002209803.1;Name=WP_002209803.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209803.1;transl_table=11 NC_008149.1 RefSeq gene 1453024 1453824 . + . ID=gene1363;Name=YPN_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06820;old_locus_tag=YPN_1278 NC_008149.1 Protein Homology CDS 1453024 1453824 . + 0 ID=cds1313;Parent=gene1363;Dbxref=Genbank:WP_002209801.1;Name=WP_002209801.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;product=bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase;protein_id=WP_002209801.1;transl_table=11 NC_008149.1 RefSeq gene 1453886 1454632 . - . ID=gene1364;Name=YPN_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06825;old_locus_tag=YPN_1279 NC_008149.1 Protein Homology CDS 1453886 1454632 . - 0 ID=cds1314;Parent=gene1364;Dbxref=Genbank:WP_002232352.1;Name=WP_002232352.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002232352.1;transl_table=11 NC_008149.1 RefSeq gene 1455005 1455514 . + . ID=gene1365;Name=YPN_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06830;old_locus_tag=YPN_1281 NC_008149.1 Protein Homology CDS 1455005 1455514 . + 0 ID=cds1315;Parent=gene1365;Dbxref=Genbank:WP_002209800.1;Name=WP_002209800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209800.1;transl_table=11 NC_008149.1 RefSeq gene 1455801 1456691 . - . ID=gene1366;Name=YPN_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06835;old_locus_tag=YPN_1282 NC_008149.1 Protein Homology CDS 1455801 1456691 . - 0 ID=cds1316;Parent=gene1366;Dbxref=Genbank:WP_002209799.1;Name=WP_002209799.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;protein_id=WP_002209799.1;transl_table=11 NC_008149.1 RefSeq gene 1457327 1458721 . - . ID=gene1367;Name=YPN_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06840;old_locus_tag=YPN_1283 NC_008149.1 Protein Homology CDS 1457327 1458721 . - 0 ID=cds1317;Parent=gene1367;Dbxref=Genbank:WP_002209798.1;Name=WP_002209798.1;gbkey=CDS;product=protease;protein_id=WP_002209798.1;transl_table=11 NC_008149.1 RefSeq gene 1458996 1459334 . - . ID=gene1368;Name=YPN_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06845;old_locus_tag=YPN_1284 NC_008149.1 Protein Homology CDS 1458996 1459334 . - 0 ID=cds1318;Parent=gene1368;Dbxref=Genbank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209797.1;transl_table=11 NC_008149.1 RefSeq gene 1459471 1460190 . - . ID=gene1369;Name=YPN_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06850;old_locus_tag=YPN_1285 NC_008149.1 Protein Homology CDS 1459471 1460190 . - 0 ID=cds1319;Parent=gene1369;Dbxref=Genbank:WP_002209796.1;Name=WP_002209796.1;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209796.1;transl_table=11 NC_008149.1 RefSeq gene 1460200 1460457 . - . ID=gene1370;Name=YPN_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06855;old_locus_tag=YPN_1286 NC_008149.1 Protein Homology CDS 1460200 1460457 . - 0 ID=cds1320;Parent=gene1370;Dbxref=Genbank:WP_002228394.1;Name=WP_002228394.1;gbkey=CDS;product=ATPase;protein_id=WP_002228394.1;transl_table=11 NC_008149.1 RefSeq gene 1460469 1461584 . - . ID=gene1371;Name=YPN_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06860;old_locus_tag=YPN_1287 NC_008149.1 Protein Homology CDS 1460469 1461584 . - 0 ID=cds1321;Parent=gene1371;Dbxref=Genbank:WP_002228395.1;Name=WP_002228395.1;gbkey=CDS;product=signal transduction histidine kinase;protein_id=WP_002228395.1;transl_table=11 NC_008149.1 RefSeq gene 1461615 1463012 . - . ID=gene1372;Name=YPN_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06865;old_locus_tag=YPN_1288 NC_008149.1 Protein Homology CDS 1461615 1463012 . - 0 ID=cds1322;Parent=gene1372;Dbxref=Genbank:WP_002209795.1;Name=WP_002209795.1;gbkey=CDS;product=transporter;protein_id=WP_002209795.1;transl_table=11 NC_008149.1 RefSeq gene 1463046 1466120 . - . ID=gene1373;Name=YPN_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06870;old_locus_tag=YPN_1289 NC_008149.1 Protein Homology CDS 1463046 1466120 . - 0 ID=cds1323;Parent=gene1373;Dbxref=Genbank:WP_002209794.1;Name=WP_002209794.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtC;protein_id=WP_002209794.1;transl_table=11 NC_008149.1 RefSeq gene 1466117 1469275 . - . ID=gene1374;Name=YPN_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06875;old_locus_tag=YPN_1290 NC_008149.1 Protein Homology CDS 1466117 1469275 . - 0 ID=cds1324;Parent=gene1374;Dbxref=Genbank:WP_002209793.1;Name=WP_002209793.1;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;gbkey=CDS;product=multidrug resistance protein MdtB;protein_id=WP_002209793.1;transl_table=11 NC_008149.1 RefSeq gene 1469275 1470609 . - . ID=gene1375;Name=YPN_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06880;old_locus_tag=YPN_1291 NC_008149.1 Protein Homology CDS 1469275 1470609 . - 0 ID=cds1325;Parent=gene1375;Dbxref=Genbank:WP_002214676.1;Name=WP_002214676.1;gbkey=CDS;product=multidrug resistance protein MdtA;protein_id=WP_002214676.1;transl_table=11 NC_008149.1 RefSeq gene 1470973 1472058 . - . ID=gene1376;Name=YPN_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06885;old_locus_tag=YPN_1292 NC_008149.1 Protein Homology CDS 1470973 1472058 . - 0 ID=cds1326;Parent=gene1376;Dbxref=Genbank:WP_002209791.1;Name=WP_002209791.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002209791.1;transl_table=11 NC_008149.1 RefSeq gene 1472441 1473946 . - . ID=gene1377;Name=YPN_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06890;old_locus_tag=YPN_1293 NC_008149.1 Protein Homology CDS 1472441 1473946 . - 0 ID=cds1327;Parent=gene1377;Dbxref=Genbank:WP_002209790.1;Name=WP_002209790.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002209790.1;transl_table=11 NC_008149.1 RefSeq gene 1474128 1475417 . + . ID=gene1378;Name=YPN_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06895;old_locus_tag=YPN_1294 NC_008149.1 Protein Homology CDS 1474128 1475417 . + 0 ID=cds1328;Parent=gene1378;Dbxref=Genbank:WP_002209789.1;Name=WP_002209789.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=WP_002209789.1;transl_table=11 NC_008149.1 RefSeq gene 1475470 1476498 . + . ID=gene1379;Name=YPN_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06900;old_locus_tag=YPN_1295 NC_008149.1 Protein Homology CDS 1475470 1476498 . + 0 ID=cds1329;Parent=gene1379;Dbxref=Genbank:WP_002209788.1;Name=WP_002209788.1;gbkey=CDS;product=polyamine ABC transporter permease;protein_id=WP_002209788.1;transl_table=11 NC_008149.1 RefSeq gene 1476545 1477810 . + . ID=gene1380;Name=YPN_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06905;old_locus_tag=YPN_1296 NC_008149.1 Protein Homology CDS 1476545 1477810 . + 0 ID=cds1330;Parent=gene1380;Dbxref=Genbank:WP_002209787.1;Name=WP_002209787.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209787.1;transl_table=11 NC_008149.1 RefSeq gene 1477872 1478720 . + . ID=gene1381;Name=YPN_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06910;old_locus_tag=YPN_1297 NC_008149.1 Protein Homology CDS 1477872 1478720 . + 0 ID=cds1331;Parent=gene1381;Dbxref=Genbank:WP_002209786.1;Name=WP_002209786.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002209786.1;transl_table=11 NC_008149.1 RefSeq gene 1478992 1480344 . - . ID=gene1382;Name=YPN_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06915;old_locus_tag=YPN_1298 NC_008149.1 Protein Homology CDS 1478992 1480344 . - 0 ID=cds1332;Parent=gene1382;Dbxref=Genbank:WP_002209785.1;Name=WP_002209785.1;gbkey=CDS;product=chaperone;protein_id=WP_002209785.1;transl_table=11 NC_008149.1 RefSeq gene 1480484 1481959 . - . ID=gene1383;Name=YPN_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06920;old_locus_tag=YPN_1299 NC_008149.1 Protein Homology CDS 1480484 1481959 . - 0 ID=cds1333;Parent=gene1383;Dbxref=Genbank:WP_002209784.1;Name=WP_002209784.1;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002209784.1;transl_table=11 NC_008149.1 RefSeq gene 1482011 1482199 . - . ID=gene1384;Name=YPN_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06925 NC_008149.1 Protein Homology CDS 1482011 1482199 . - 0 ID=cds1334;Parent=gene1384;Dbxref=Genbank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_012303868.1;transl_table=11 NC_008149.1 RefSeq gene 1482335 1483894 . - . ID=gene1385;Name=YPN_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06930;old_locus_tag=YPN_1300 NC_008149.1 Protein Homology CDS 1482335 1483894 . - 0 ID=cds1335;Parent=gene1385;Dbxref=Genbank:WP_002209783.1;Name=WP_002209783.1;gbkey=CDS;product=exopolyphosphatase;protein_id=WP_002209783.1;transl_table=11 NC_008149.1 RefSeq gene 1483905 1485968 . - . ID=gene1386;Name=YPN_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06935;old_locus_tag=YPN_1301 NC_008149.1 Protein Homology CDS 1483905 1485968 . - 0 ID=cds1336;Parent=gene1386;Dbxref=Genbank:WP_002209782.1;Name=WP_002209782.1;gbkey=CDS;product=polyphosphate kinase;protein_id=WP_002209782.1;transl_table=11 NC_008149.1 RefSeq gene 1486239 1488471 . + . ID=gene1387;Name=YPN_RS06940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS06940;old_locus_tag=YPN_1302;pseudo=true NC_008149.1 Protein Homology CDS 1486239 1488471 . + 0 ID=cds1337;Parent=gene1387;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphate ABC transporter permease;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 1488531 1490183 . + . ID=gene1388;Name=YPN_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06945;old_locus_tag=YPN_1304 NC_008149.1 Protein Homology CDS 1488531 1490183 . + 0 ID=cds1338;Parent=gene1388;Dbxref=Genbank:WP_032465662.1;Name=WP_032465662.1;gbkey=CDS;product=phosphate ABC transporter permease;protein_id=WP_032465662.1;transl_table=11 NC_008149.1 RefSeq gene 1490211 1491023 . + . ID=gene1389;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=YPN_RS06950;old_locus_tag=YPN_1305 NC_008149.1 Protein Homology CDS 1490211 1491023 . + 0 ID=cds1339;Parent=gene1389;Dbxref=Genbank:WP_002209780.1;Name=WP_002209780.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;gbkey=CDS;gene=pstB;product=phosphate import ATP-binding protein PstB 1;protein_id=WP_002209780.1;transl_table=11 NC_008149.1 RefSeq gene 1491251 1491631 . + . ID=gene1390;Name=YPN_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06955;old_locus_tag=YPN_1306 NC_008149.1 Protein Homology CDS 1491251 1491631 . + 0 ID=cds1340;Parent=gene1390;Dbxref=Genbank:WP_002214664.1;Name=WP_002214664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214664.1;transl_table=11 NC_008149.1 RefSeq gene 1491718 1492440 . + . ID=gene1391;Name=YPN_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06960;old_locus_tag=YPN_1307 NC_008149.1 Protein Homology CDS 1491718 1492440 . + 0 ID=cds1341;Parent=gene1391;Dbxref=Genbank:WP_002214662.1;Name=WP_002214662.1;gbkey=CDS;product=N-methylation of lysine residues in flagellin;protein_id=WP_002214662.1;transl_table=11 NC_008149.1 RefSeq gene 1492534 1493079 . - . ID=gene1392;Name=YPN_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06965;old_locus_tag=YPN_1308 NC_008149.1 Protein Homology CDS 1492534 1493079 . - 0 ID=cds1342;Parent=gene1392;Dbxref=Genbank:WP_002209779.1;Name=WP_002209779.1;Note=catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11 NC_008149.1 RefSeq gene 1493308 1493946 . - . ID=gene1393;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=YPN_RS06970;old_locus_tag=YPN_1309 NC_008149.1 Protein Homology CDS 1493308 1493946 . - 0 ID=cds1343;Parent=gene1393;Dbxref=Genbank:WP_002209778.1;Name=WP_002209778.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002209778.1;transl_table=11 NC_008149.1 RefSeq gene 1494061 1495104 . - . ID=gene1394;Name=YPN_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06975;old_locus_tag=YPN_1310 NC_008149.1 Protein Homology CDS 1494061 1495104 . - 0 ID=cds1344;Parent=gene1394;Dbxref=Genbank:WP_002209777.1;Name=WP_002209777.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_002209777.1;transl_table=11 NC_008149.1 RefSeq gene 1495501 1496127 . + . ID=gene1395;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=YPN_RS06980;old_locus_tag=YPN_1311 NC_008149.1 Protein Homology CDS 1495501 1496127 . + 0 ID=cds1345;Parent=gene1395;Dbxref=Genbank:WP_002209776.1;Name=WP_002209776.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1496151 1496870 . + . ID=id137;gbkey=repeat_region NC_008149.1 RefSeq gene 1496303 1496761 . + . ID=gene1396;Name=YPN_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06985;old_locus_tag=YPN_1312 NC_008149.1 Protein Homology CDS 1496303 1496761 . + 0 ID=cds1346;Parent=gene1396;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1496949 1497656 . + . ID=gene1397;Name=YPN_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06990;old_locus_tag=YPN_1313 NC_008149.1 Protein Homology CDS 1496949 1497656 . + 0 ID=cds1347;Parent=gene1397;Dbxref=Genbank:WP_002228401.1;Name=WP_002228401.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;product=DnaA regulatory inactivator Hda;protein_id=WP_002228401.1;transl_table=11 NC_008149.1 RefSeq gene 1497868 1498224 . - . ID=gene1398;Name=YPN_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS06995;old_locus_tag=YPN_1314 NC_008149.1 Protein Homology CDS 1497868 1498224 . - 0 ID=cds1348;Parent=gene1398;Dbxref=Genbank:WP_002208565.1;Name=WP_002208565.1;gbkey=CDS;product=arsenate reductase;protein_id=WP_002208565.1;transl_table=11 NC_008149.1 RefSeq gene 1498331 1499815 . - . ID=gene1399;Name=YPN_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07000;old_locus_tag=YPN_1315 NC_008149.1 Protein Homology CDS 1498331 1499815 . - 0 ID=cds1349;Parent=gene1399;Dbxref=Genbank:WP_002217569.1;Name=WP_002217569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217569.1;transl_table=11 NC_008149.1 RefSeq gene 1500146 1501210 . + . ID=gene1400;Name=YPN_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07005;old_locus_tag=YPN_1316 NC_008149.1 Protein Homology CDS 1500146 1501210 . + 0 ID=cds1350;Parent=gene1400;Dbxref=Genbank:WP_002208563.1;Name=WP_002208563.1;gbkey=CDS;product=permease;protein_id=WP_002208563.1;transl_table=11 NC_008149.1 RefSeq gene 1501299 1501472 . - . ID=gene1401;Name=YPN_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07010;old_locus_tag=YPN_1317 NC_008149.1 Protein Homology CDS 1501299 1501472 . - 0 ID=cds1351;Parent=gene1401;Dbxref=Genbank:WP_002217567.1;Name=WP_002217567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217567.1;transl_table=11 NC_008149.1 RefSeq gene 1501810 1502505 . + . ID=gene1402;Name=YPN_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07015;old_locus_tag=YPN_1319 NC_008149.1 Protein Homology CDS 1501810 1502505 . + 0 ID=cds1352;Parent=gene1402;Dbxref=Genbank:WP_002208561.1;Name=WP_002208561.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208561.1;transl_table=11 NC_008149.1 RefSeq gene 1502509 1502928 . + . ID=gene1403;Name=YPN_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07020;old_locus_tag=YPN_1320 NC_008149.1 Protein Homology CDS 1502509 1502928 . + 0 ID=cds1353;Parent=gene1403;Dbxref=Genbank:WP_002217563.1;Name=WP_002217563.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217563.1;transl_table=11 NC_008149.1 RefSeq gene 1503172 1503642 . - . ID=gene1404;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=YPN_RS07025;old_locus_tag=YPN_1321 NC_008149.1 Protein Homology CDS 1503172 1503642 . - 0 ID=cds1354;Parent=gene1404;Dbxref=Genbank:WP_002224836.1;Name=WP_002224836.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thiol peroxidase;protein_id=WP_002224836.1;transl_table=11 NC_008149.1 RefSeq gene 1503645 1504214 . - . ID=gene1405;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=YPN_RS07030;old_locus_tag=YPN_1322 NC_008149.1 Protein Homology CDS 1503645 1504214 . - 0 ID=cds1355;Parent=gene1405;Dbxref=Genbank:WP_002227068.1;Name=WP_002227068.1;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional regulator;protein_id=WP_002227068.1;transl_table=11 NC_008149.1 RefSeq gene 1504379 1505260 . + . ID=gene1406;Name=YPN_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07035;old_locus_tag=YPN_1323 NC_008149.1 Protein Homology CDS 1504379 1505260 . + 0 ID=cds1356;Parent=gene1406;Dbxref=Genbank:WP_002227834.1;Name=WP_002227834.1;gbkey=CDS;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002227834.1;transl_table=11 NC_008149.1 RefSeq gene 1505278 1506336 . + . ID=gene1407;Name=YPN_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07040;old_locus_tag=YPN_1324 NC_008149.1 Protein Homology CDS 1505278 1506336 . + 0 ID=cds1357;Parent=gene1407;Dbxref=Genbank:WP_002208557.1;Name=WP_002208557.1;gbkey=CDS;product=outer membrane protein assembly factor BamC;protein_id=WP_002208557.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1506362 1507079 . + . ID=id138;gbkey=repeat_region NC_008149.1 RefSeq gene 1506366 1506521 . + . ID=gene1408;Name=YPN_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07045 NC_008149.1 Protein Homology CDS 1506366 1506521 . + 0 ID=cds1358;Parent=gene1408;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 1506511 1506969 . + . ID=gene1409;Name=YPN_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07050;old_locus_tag=YPN_1325 NC_008149.1 Protein Homology CDS 1506511 1506969 . + 0 ID=cds1359;Parent=gene1409;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1507117 1507830 . + . ID=gene1410;Name=YPN_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07055;old_locus_tag=YPN_1326 NC_008149.1 Protein Homology CDS 1507117 1507830 . + 0 ID=cds1360;Parent=gene1410;Dbxref=Genbank:WP_002208555.1;Name=WP_002208555.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11 NC_008149.1 RefSeq gene 1508049 1508915 . + . ID=gene1411;Name=YPN_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07060;old_locus_tag=YPN_1327 NC_008149.1 Protein Homology CDS 1508049 1508915 . + 0 ID=cds1361;Parent=gene1411;Dbxref=Genbank:WP_002208554.1;Name=WP_002208554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208554.1;transl_table=11 NC_008149.1 RefSeq gene 1509009 1509461 . + . ID=gene1412;Name=YPN_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07065;old_locus_tag=YPN_1328 NC_008149.1 Protein Homology CDS 1509009 1509461 . + 0 ID=cds1362;Parent=gene1412;Dbxref=Genbank:WP_002208553.1;Name=WP_002208553.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208553.1;transl_table=11 NC_008149.1 RefSeq gene 1509463 1511562 . + . ID=gene1413;Name=YPN_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07070;old_locus_tag=YPN_1329 NC_008149.1 Protein Homology CDS 1509463 1511562 . + 0 ID=cds1363;Parent=gene1413;Dbxref=Genbank:WP_002208552.1;Name=WP_002208552.1;Note=cetylates the wobble base C34 of the elongation-specific methionine tRNA;gbkey=CDS;product=tRNA(Met) cytidine acetyltransferase TmcA;protein_id=WP_002208552.1;transl_table=11 NC_008149.1 RefSeq gene 1511767 1511961 . - . ID=gene1414;Name=YPN_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07075;old_locus_tag=YPN_1330 NC_008149.1 Protein Homology CDS 1511767 1511961 . - 0 ID=cds1364;Parent=gene1414;Dbxref=Genbank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208551.1;transl_table=11 NC_008149.1 RefSeq gene 1512029 1512706 . - . ID=gene1415;Name=YPN_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07080;old_locus_tag=YPN_1331 NC_008149.1 Protein Homology CDS 1512029 1512706 . - 0 ID=cds1365;Parent=gene1415;Dbxref=Genbank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;product=carboxypeptidase;protein_id=WP_002208550.1;transl_table=11 NC_008149.1 RefSeq gene 1512703 1513830 . - . ID=gene1416;Name=YPN_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07085;old_locus_tag=YPN_1332 NC_008149.1 Protein Homology CDS 1512703 1513830 . - 0 ID=cds1366;Parent=gene1416;Dbxref=Genbank:WP_002208549.1;Name=WP_002208549.1;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002208549.1;transl_table=11 NC_008149.1 RefSeq gene 1513832 1514230 . - . ID=gene1417;Name=YPN_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07090;old_locus_tag=YPN_1333 NC_008149.1 Protein Homology CDS 1513832 1514230 . - 0 ID=cds1367;Parent=gene1417;Dbxref=Genbank:WP_002208548.1;Name=WP_002208548.1;gbkey=CDS;product=reductase;protein_id=WP_002208548.1;transl_table=11 NC_008149.1 RefSeq gene 1514390 1514863 . - . ID=gene1418;Name=YPN_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07095;old_locus_tag=YPN_1334 NC_008149.1 Protein Homology CDS 1514390 1514863 . - 0 ID=cds1368;Parent=gene1418;Dbxref=Genbank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208547.1;transl_table=11 NC_008149.1 RefSeq gene 1515174 1516262 . + . ID=gene1419;Name=YPN_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07100;old_locus_tag=YPN_1335 NC_008149.1 Protein Homology CDS 1515174 1516262 . + 0 ID=cds1369;Parent=gene1419;Dbxref=Genbank:WP_002208546.1;Name=WP_002208546.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208546.1;transl_table=11 NC_008149.1 RefSeq gene 1516357 1518126 . + . ID=gene1420;Name=YPN_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07105;old_locus_tag=YPN_1336 NC_008149.1 Protein Homology CDS 1516357 1518126 . + 0 ID=cds1370;Parent=gene1420;Dbxref=Genbank:WP_002208545.1;Name=WP_002208545.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002208545.1;transl_table=11 NC_008149.1 RefSeq gene 1518119 1519189 . + . ID=gene1421;Name=YPN_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07110;old_locus_tag=YPN_1337 NC_008149.1 Protein Homology CDS 1518119 1519189 . + 0 ID=cds1371;Parent=gene1421;Dbxref=Genbank:WP_002208544.1;Name=WP_002208544.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208544.1;transl_table=11 NC_008149.1 RefSeq gene 1519670 1521340 . + . ID=gene1422;Name=YPN_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07115;old_locus_tag=YPN_1338 NC_008149.1 Protein Homology CDS 1519670 1521340 . + 0 ID=cds1372;Parent=gene1422;Dbxref=Genbank:WP_002378486.1;Name=WP_002378486.1;gbkey=CDS;product=sulfatase;protein_id=WP_002378486.1;transl_table=11 NC_008149.1 RefSeq gene 1521398 1522573 . + . ID=gene1423;Name=YPN_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07120;old_locus_tag=YPN_1339 NC_008149.1 Protein Homology CDS 1521398 1522573 . + 0 ID=cds1373;Parent=gene1423;Dbxref=Genbank:WP_002208542.1;Name=WP_002208542.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002208542.1;transl_table=11 NC_008149.1 RefSeq gene 1523327 1523875 . - . ID=gene1424;Name=YPN_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07125;old_locus_tag=YPN_1340 NC_008149.1 Protein Homology CDS 1523327 1523875 . - 0 ID=cds1374;Parent=gene1424;Dbxref=Genbank:WP_002208541.1;Name=WP_002208541.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208541.1;transl_table=11 NC_008149.1 RefSeq gene 1524164 1524748 . - . ID=gene1425;Name=YPN_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07130;old_locus_tag=YPN_1341 NC_008149.1 Protein Homology CDS 1524164 1524748 . - 0 ID=cds1375;Parent=gene1425;Dbxref=Genbank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11 NC_008149.1 RefSeq gene 1524979 1528110 . - . ID=gene1426;Name=YPN_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07135;old_locus_tag=YPN_1342 NC_008149.1 Protein Homology CDS 1524979 1528110 . - 0 ID=cds1376;Parent=gene1426;Dbxref=Genbank:WP_002208539.1;Name=WP_002208539.1;gbkey=CDS;product=multidrug efflux RND transporter permease subunit;protein_id=WP_002208539.1;transl_table=11 NC_008149.1 RefSeq gene 1528525 1528803 . + . ID=gene1427;Name=YPN_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07140;old_locus_tag=YPN_1343 NC_008149.1 Protein Homology CDS 1528525 1528803 . + 0 ID=cds1377;Parent=gene1427;Dbxref=Genbank:WP_002208538.1;Name=WP_002208538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208538.1;transl_table=11 NC_008149.1 RefSeq gene 1528816 1529445 . - . ID=gene1428;Name=YPN_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07145;old_locus_tag=YPN_1344 NC_008149.1 Protein Homology CDS 1528816 1529445 . - 0 ID=cds1378;Parent=gene1428;Dbxref=Genbank:WP_002208537.1;Name=WP_002208537.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208537.1;transl_table=11 NC_008149.1 RefSeq gene 1530278 1530781 . + . ID=gene1429;Name=YPN_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07150;old_locus_tag=YPN_1345 NC_008149.1 Protein Homology CDS 1530278 1530781 . + 0 ID=cds1379;Parent=gene1429;Dbxref=Genbank:WP_002208536.1;Name=WP_002208536.1;gbkey=CDS;product=ferredoxin-type protein NapF;protein_id=WP_002208536.1;transl_table=11 NC_008149.1 RefSeq gene 1530771 1531037 . + . ID=gene1430;Name=YPN_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07155;old_locus_tag=YPN_1346 NC_008149.1 Protein Homology CDS 1530771 1531037 . + 0 ID=cds1380;Parent=gene1430;Dbxref=Genbank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002208535.1;transl_table=11 NC_008149.1 RefSeq gene 1531034 1533526 . + . ID=gene1431;Name=YPN_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07160;old_locus_tag=YPN_1347 NC_008149.1 Protein Homology CDS 1531034 1533526 . + 0 ID=cds1381;Parent=gene1431;Dbxref=Genbank:WP_002208534.1;Name=WP_002208534.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;product=periplasmic nitrate reductase;protein_id=WP_002208534.1;transl_table=11 NC_008149.1 RefSeq gene 1533609 1534076 . + . ID=gene1432;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=YPN_RS07165;old_locus_tag=YPN_1348 NC_008149.1 Protein Homology CDS 1533609 1534076 . + 0 ID=cds1382;Parent=gene1432;Dbxref=Genbank:WP_002208532.1;Name=WP_002208532.1;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=nitrate reductase cytochrome C550 subunit;protein_id=WP_002208532.1;transl_table=11 NC_008149.1 RefSeq gene 1534104 1534703 . + . ID=gene1433;Name=YPN_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07170;old_locus_tag=YPN_1349 NC_008149.1 Protein Homology CDS 1534104 1534703 . + 0 ID=cds1383;Parent=gene1433;Dbxref=Genbank:WP_002228406.1;Name=WP_002228406.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;product=cytochrome C protein NapC;protein_id=WP_002228406.1;transl_table=11 NC_008149.1 RefSeq gene 1534887 1535483 . + . ID=gene1434;Name=YPN_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07175;old_locus_tag=YPN_1350 NC_008149.1 Protein Homology CDS 1534887 1535483 . + 0 ID=cds1384;Parent=gene1434;Dbxref=Genbank:WP_002208529.1;Name=WP_002208529.1;gbkey=CDS;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002208529.1;transl_table=11 NC_008149.1 RefSeq gene 1535679 1537958 . + . ID=gene1435;Name=YPN_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07180;old_locus_tag=YPN_1351 NC_008149.1 Protein Homology CDS 1535679 1537958 . + 0 ID=cds1385;Parent=gene1435;Dbxref=Genbank:WP_002224829.1;Name=WP_002224829.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=NADP-dependent malic enzyme;protein_id=WP_002224829.1;transl_table=11 NC_008149.1 RefSeq gene 1538109 1538567 . - . ID=gene1436;Name=YPN_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07185;old_locus_tag=YPN_1352 NC_008149.1 Protein Homology CDS 1538109 1538567 . - 0 ID=cds1386;Parent=gene1436;Dbxref=Genbank:WP_002208527.1;Name=WP_002208527.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208527.1;transl_table=11 NC_008149.1 RefSeq gene 1538567 1539496 . - . ID=gene1437;Name=YPN_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07190;old_locus_tag=YPN_1353 NC_008149.1 Protein Homology CDS 1538567 1539496 . - 0 ID=cds1387;Parent=gene1437;Dbxref=Genbank:WP_002208526.1;Name=WP_002208526.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002208526.1;transl_table=11 NC_008149.1 RefSeq gene 1539779 1540204 . + . ID=gene1438;Name=YPN_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07195;old_locus_tag=YPN_1354 NC_008149.1 Protein Homology CDS 1539779 1540204 . + 0 ID=cds1388;Parent=gene1438;Dbxref=Genbank:WP_002208525.1;Name=WP_002208525.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002208525.1;transl_table=11 NC_008149.1 RefSeq gene 1540386 1540571 . - . ID=gene1439;Name=YPN_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07200;old_locus_tag=YPN_1355 NC_008149.1 Protein Homology CDS 1540386 1540571 . - 0 ID=cds1389;Parent=gene1439;Dbxref=Genbank:WP_002216562.1;Name=WP_002216562.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216562.1;transl_table=11 NC_008149.1 RefSeq gene 1540677 1541093 . + . ID=gene1440;Name=YPN_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07205;old_locus_tag=YPN_1356 NC_008149.1 Protein Homology CDS 1540677 1541093 . + 0 ID=cds1390;Parent=gene1440;Dbxref=Genbank:WP_002208524.1;Name=WP_002208524.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208524.1;transl_table=11 NC_008149.1 RefSeq gene 1541185 1543464 . - . ID=gene1441;Name=YPN_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07210;old_locus_tag=YPN_1357 NC_008149.1 Protein Homology CDS 1541185 1543464 . - 0 ID=cds1391;Parent=gene1441;Dbxref=Genbank:WP_002208523.1;Name=WP_002208523.1;gbkey=CDS;product=autotransporter;protein_id=WP_002208523.1;transl_table=11 NC_008149.1 RefSeq gene 1543951 1544364 . - . ID=gene1442;Name=YPN_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07215;old_locus_tag=YPN_1358 NC_008149.1 Protein Homology CDS 1543951 1544364 . - 0 ID=cds1392;Parent=gene1442;Dbxref=Genbank:WP_002208522.1;Name=WP_002208522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208522.1;transl_table=11 NC_008149.1 RefSeq gene 1544723 1545334 . + . ID=gene1443;Name=YPN_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07220;old_locus_tag=YPN_1359 NC_008149.1 Protein Homology CDS 1544723 1545334 . + 0 ID=cds1393;Parent=gene1443;Dbxref=Genbank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208521.1;transl_table=11 NC_008149.1 RefSeq gene 1545512 1546411 . + . ID=gene1444;Name=YPN_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07225;old_locus_tag=YPN_1360 NC_008149.1 Protein Homology CDS 1545512 1546411 . + 0 ID=cds1394;Parent=gene1444;Dbxref=Genbank:WP_002208519.1;Name=WP_002208519.1;gbkey=CDS;product=deferrochelatase/peroxidase YfeX;protein_id=WP_002208519.1;transl_table=11 NC_008149.1 RefSeq gene 1546509 1547402 . - . ID=gene1445;Name=YPN_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07230;old_locus_tag=YPN_1361 NC_008149.1 Protein Homology CDS 1546509 1547402 . - 0 ID=cds1395;Parent=gene1445;Dbxref=Genbank:WP_002208518.1;Name=WP_002208518.1;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=WP_002208518.1;transl_table=11 NC_008149.1 RefSeq gene 1547465 1548088 . - . ID=gene1446;Name=YPN_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07235;old_locus_tag=YPN_1362 NC_008149.1 Protein Homology CDS 1547465 1548088 . - 0 ID=cds1396;Parent=gene1446;Dbxref=Genbank:WP_002354634.1;Name=WP_002354634.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_002354634.1;transl_table=11 NC_008149.1 RefSeq gene 1548372 1549499 . - . ID=gene1447;Name=YPN_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07240;old_locus_tag=YPN_1363 NC_008149.1 Protein Homology CDS 1548372 1549499 . - 0 ID=cds1397;Parent=gene1447;Dbxref=Genbank:WP_002224823.1;Name=WP_002224823.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224823.1;transl_table=11 NC_008149.1 RefSeq gene 1549768 1550640 . + . ID=gene1448;Name=YPN_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07245;old_locus_tag=YPN_1364 NC_008149.1 Protein Homology CDS 1549768 1550640 . + 0 ID=cds1398;Parent=gene1448;Dbxref=Genbank:WP_002208516.1;Name=WP_002208516.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208516.1;transl_table=11 NC_008149.1 RefSeq gene 1550722 1551192 . + . ID=gene1449;Name=YPN_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07250;old_locus_tag=YPN_1365 NC_008149.1 Protein Homology CDS 1550722 1551192 . + 0 ID=cds1399;Parent=gene1449;Dbxref=Genbank:WP_002208515.1;Name=WP_002208515.1;gbkey=CDS;product=sugar isomerase;protein_id=WP_002208515.1;transl_table=11 NC_008149.1 RefSeq gene 1551232 1551384 . + . ID=gene1450;Name=YPN_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07255 NC_008149.1 Protein Homology CDS 1551232 1551384 . + 0 ID=cds1400;Parent=gene1450;Dbxref=Genbank:WP_002215009.1;Name=WP_002215009.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215009.1;transl_table=11 NC_008149.1 RefSeq gene 1551381 1552259 . + . ID=gene1451;Name=YPN_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07260;old_locus_tag=YPN_1366 NC_008149.1 Protein Homology CDS 1551381 1552259 . + 0 ID=cds1401;Parent=gene1451;Dbxref=Genbank:WP_002208514.1;Name=WP_002208514.1;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=WP_002208514.1;transl_table=11 NC_008149.1 RefSeq gene 1552864 1554396 . + . ID=gene1452;Name=YPN_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07265;old_locus_tag=YPN_1367 NC_008149.1 Protein Homology CDS 1552864 1554396 . + 0 ID=cds1402;Parent=gene1452;Dbxref=Genbank:WP_002208513.1;Name=WP_002208513.1;gbkey=CDS;product=sialic acid transporter;protein_id=WP_002208513.1;transl_table=11 NC_008149.1 RefSeq gene 1554711 1555748 . + . ID=gene1453;Name=YPN_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07270;old_locus_tag=YPN_1368 NC_008149.1 Protein Homology CDS 1554711 1555748 . + 0 ID=cds1403;Parent=gene1453;Dbxref=Genbank:WP_002208512.1;Name=WP_002208512.1;gbkey=CDS;product=thiosulfate transporter subunit;protein_id=WP_002208512.1;transl_table=11 NC_008149.1 RefSeq gene 1555748 1556581 . + . ID=gene1454;Name=YPN_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07275;old_locus_tag=YPN_1369 NC_008149.1 Protein Homology CDS 1555748 1556581 . + 0 ID=cds1404;Parent=gene1454;Dbxref=Genbank:WP_002208511.1;Name=WP_002208511.1;gbkey=CDS;product=sulfate/thiosulfate transporter subunit;protein_id=WP_002208511.1;transl_table=11 NC_008149.1 RefSeq gene 1556581 1557456 . + . ID=gene1455;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=YPN_RS07280;old_locus_tag=YPN_1370 NC_008149.1 Protein Homology CDS 1556581 1557456 . + 0 ID=cds1405;Parent=gene1455;Dbxref=Genbank:WP_002208510.1;Name=WP_002208510.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate transporter permease subunit;protein_id=WP_002208510.1;transl_table=11 NC_008149.1 RefSeq gene 1557446 1558537 . + . ID=gene1456;Name=YPN_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07285;old_locus_tag=YPN_1371 NC_008149.1 Protein Homology CDS 1557446 1558537 . + 0 ID=cds1406;Parent=gene1456;Dbxref=Genbank:WP_002208509.1;Name=WP_002208509.1;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=WP_002208509.1;transl_table=11 NC_008149.1 RefSeq gene 1558708 1559586 . + . ID=gene1457;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=YPN_RS07290;old_locus_tag=YPN_1372 NC_008149.1 Protein Homology CDS 1558708 1559586 . + 0 ID=cds1407;Parent=gene1457;Dbxref=Genbank:WP_002208508.1;Name=WP_002208508.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=WP_002208508.1;transl_table=11 NC_008149.1 RefSeq gene 1559831 1561063 . + . ID=gene1458;Name=YPN_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07295;old_locus_tag=YPN_1373 NC_008149.1 Protein Homology CDS 1559831 1561063 . + 0 ID=cds1408;Parent=gene1458;Dbxref=Genbank:WP_002208507.1;Name=WP_002208507.1;gbkey=CDS;product=type III secretion protein GogB;protein_id=WP_002208507.1;transl_table=11 NC_008149.1 RefSeq gene 1561444 1562151 . - . ID=gene1459;Name=YPN_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07300;old_locus_tag=YPN_1374 NC_008149.1 Protein Homology CDS 1561444 1562151 . - 0 ID=cds1409;Parent=gene1459;Dbxref=Genbank:WP_002224818.1;Name=WP_002224818.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002224818.1;transl_table=11 NC_008149.1 RefSeq gene 1562148 1563692 . - . ID=gene1460;Name=YPN_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07305;old_locus_tag=YPN_1375 NC_008149.1 Protein Homology CDS 1562148 1563692 . - 0 ID=cds1410;Parent=gene1460;Dbxref=Genbank:WP_002208505.1;Name=WP_002208505.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208505.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1563748 1563916 . + . ID=id139;gbkey=repeat_region NC_008149.1 RefSeq gene 1563925 1565343 . - . ID=gene1461;Name=YPN_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07310;old_locus_tag=YPN_1376 NC_008149.1 Protein Homology CDS 1563925 1565343 . - 0 ID=cds1411;Parent=gene1461;Dbxref=Genbank:WP_002208502.1;Name=WP_002208502.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208502.1;transl_table=11 NC_008149.1 RefSeq gene 1566051 1567232 . + . ID=gene1462;Name=YPN_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07315;old_locus_tag=YPN_1377 NC_008149.1 Protein Homology CDS 1566051 1567232 . + 0 ID=cds1412;Parent=gene1462;Dbxref=Genbank:WP_002228410.1;Name=WP_002228410.1;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002228410.1;transl_table=11 NC_008149.1 RefSeq gene 1567266 1567457 . + . ID=gene1463;Name=YPN_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07320;old_locus_tag=YPN_1378 NC_008149.1 Protein Homology CDS 1567266 1567457 . + 0 ID=cds1413;Parent=gene1463;Dbxref=Genbank:WP_002215018.1;Name=WP_002215018.1;gbkey=CDS;product=creatininase;protein_id=WP_002215018.1;transl_table=11 NC_008149.1 RefSeq gene 1567478 1568485 . + . ID=gene1464;Name=YPN_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07325;old_locus_tag=YPN_1379 NC_008149.1 Protein Homology CDS 1567478 1568485 . + 0 ID=cds1414;Parent=gene1464;Dbxref=Genbank:WP_002228411.1;Name=WP_002228411.1;gbkey=CDS;product=peptidase M24;protein_id=WP_002228411.1;transl_table=11 NC_008149.1 RefSeq gene 1568628 1568825 . + . ID=gene1465;Name=YPN_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07330 NC_008149.1 Protein Homology CDS 1568628 1568825 . + 0 ID=cds1415;Parent=gene1465;Dbxref=Genbank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215023.1;transl_table=11 NC_008149.1 RefSeq gene 1568822 1570282 . + . ID=gene1466;Name=YPN_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07335;old_locus_tag=YPN_1380 NC_008149.1 Protein Homology CDS 1568822 1570282 . + 0 ID=cds1416;Parent=gene1466;Dbxref=Genbank:WP_002208498.1;Name=WP_002208498.1;gbkey=CDS;product=permease;protein_id=WP_002208498.1;transl_table=11 NC_008149.1 RefSeq gene 1570342 1571988 . + . ID=gene1467;Name=YPN_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07340;old_locus_tag=YPN_1381 NC_008149.1 Protein Homology CDS 1570342 1571988 . + 0 ID=cds1417;Parent=gene1467;Dbxref=Genbank:WP_002208497.1;Name=WP_002208497.1;gbkey=CDS;product=CoA-disulfide reductase;protein_id=WP_002208497.1;transl_table=11 NC_008149.1 RefSeq gene 1572243 1574279 . - . ID=gene1468;Name=YPN_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07345;old_locus_tag=YPN_1382 NC_008149.1 Protein Homology CDS 1572243 1574279 . - 0 ID=cds1418;Parent=gene1468;Dbxref=Genbank:WP_002208496.1;Name=WP_002208496.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002208496.1;transl_table=11 NC_008149.1 RefSeq gene 1574283 1575488 . - . ID=gene1469;Name=YPN_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07350;old_locus_tag=YPN_1383 NC_008149.1 Protein Homology CDS 1574283 1575488 . - 0 ID=cds1419;Parent=gene1469;Dbxref=Genbank:WP_002208495.1;Name=WP_002208495.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002208495.1;transl_table=11 NC_008149.1 RefSeq gene 1575676 1576359 . + . ID=gene1470;Name=YPN_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07355;old_locus_tag=YPN_1384 NC_008149.1 Protein Homology CDS 1575676 1576359 . + 0 ID=cds1420;Parent=gene1470;Dbxref=Genbank:WP_002208494.1;Name=WP_002208494.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208494.1;transl_table=11 NC_008149.1 RefSeq gene 1576385 1577734 . + . ID=gene1471;Name=YPN_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07360;old_locus_tag=YPN_1385 NC_008149.1 Protein Homology CDS 1576385 1577734 . + 0 ID=cds1421;Parent=gene1471;Dbxref=Genbank:WP_002208493.1;Name=WP_002208493.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002208493.1;transl_table=11 NC_008149.1 RefSeq gene 1577820 1578014 . + . ID=gene1472;Name=YPN_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07365 NC_008149.1 Protein Homology CDS 1577820 1578014 . + 0 ID=cds1422;Parent=gene1472;Dbxref=Genbank:WP_002430126.1;Name=WP_002430126.1;gbkey=CDS;product=invasin;protein_id=WP_002430126.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1577851 1578572 . + . ID=id140;gbkey=repeat_region NC_008149.1 RefSeq gene 1578004 1578462 . + . ID=gene1473;Name=YPN_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07370;old_locus_tag=YPN_1386 NC_008149.1 Protein Homology CDS 1578004 1578462 . + 0 ID=cds1423;Parent=gene1473;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 1578605 1579114 . - . ID=gene1474;Name=YPN_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07375;old_locus_tag=YPN_1387 NC_008149.1 Protein Homology CDS 1578605 1579114 . - 0 ID=cds1424;Parent=gene1474;Dbxref=Genbank:WP_002208491.1;Name=WP_002208491.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11 NC_008149.1 RefSeq gene 1579163 1580890 . - . ID=gene1475;Name=YPN_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07380;old_locus_tag=YPN_1388 NC_008149.1 Protein Homology CDS 1579163 1580890 . - 0 ID=cds1425;Parent=gene1475;Dbxref=Genbank:WP_002208490.1;Name=WP_002208490.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002208490.1;transl_table=11 NC_008149.1 RefSeq gene 1580939 1581196 . - . ID=gene1476;Name=YPN_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07385;old_locus_tag=YPN_1389 NC_008149.1 Protein Homology CDS 1580939 1581196 . - 0 ID=cds1426;Parent=gene1476;Dbxref=Genbank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002208488.1;transl_table=11 NC_008149.1 RefSeq gene 1581695 1582663 . - . ID=gene1477;Name=YPN_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07390;old_locus_tag=YPN_1390 NC_008149.1 Protein Homology CDS 1581695 1582663 . - 0 ID=cds1427;Parent=gene1477;Dbxref=Genbank:WP_002222180.1;Name=WP_002222180.1;gbkey=CDS;product=cysteine synthase A;protein_id=WP_002222180.1;transl_table=11 NC_008149.1 RefSeq gene 1582820 1583554 . - . ID=gene1478;Name=YPN_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07395;old_locus_tag=YPN_1391 NC_008149.1 Protein Homology CDS 1582820 1583554 . - 0 ID=cds1428;Parent=gene1478;Dbxref=Genbank:WP_002213487.1;Name=WP_002213487.1;gbkey=CDS;product=cysteine biosynthesis protein CysZ;protein_id=WP_002213487.1;transl_table=11 NC_008149.1 RefSeq gene 1583803 1584789 . + . ID=gene1479;Name=YPN_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07400;old_locus_tag=YPN_1392 NC_008149.1 Protein Homology CDS 1583803 1584789 . + 0 ID=cds1429;Parent=gene1479;Dbxref=Genbank:WP_002227089.1;Name=WP_002227089.1;gbkey=CDS;product=Cell division protein ZipA homolog;protein_id=WP_002227089.1;transl_table=11 NC_008149.1 RefSeq gene 1584880 1586892 . + . ID=gene1480;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=YPN_RS07405;old_locus_tag=YPN_1393 NC_008149.1 Protein Homology CDS 1584880 1586892 . + 0 ID=cds1430;Parent=gene1480;Dbxref=Genbank:WP_002213368.1;Name=WP_002213368.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=DNA ligase;protein_id=WP_002213368.1;transl_table=11 NC_008149.1 RefSeq gene 1586912 1587127 . + . ID=gene1481;Name=YPN_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07410;old_locus_tag=YPN_1394 NC_008149.1 Protein Homology CDS 1586912 1587127 . + 0 ID=cds1431;Parent=gene1481;Dbxref=Genbank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213369.1;transl_table=11 NC_008149.1 RefSeq gene 1587228 1587575 . - . ID=gene1482;Name=YPN_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07415;old_locus_tag=YPN_1395 NC_008149.1 Protein Homology CDS 1587228 1587575 . - 0 ID=cds1432;Parent=gene1482;Dbxref=Genbank:WP_002213372.1;Name=WP_002213372.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213372.1;transl_table=11 NC_008149.1 RefSeq gene 1587707 1588312 . - . ID=gene1483;Name=YPN_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07420;old_locus_tag=YPN_1396 NC_008149.1 Protein Homology CDS 1587707 1588312 . - 0 ID=cds1433;Parent=gene1483;Dbxref=Genbank:WP_002213374.1;Name=WP_002213374.1;gbkey=CDS;product=nitrate reductase;protein_id=WP_002213374.1;transl_table=11 NC_008149.1 RefSeq gene 1588507 1588582 . - . ID=gene1484;Name=YPN_RS07425;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS07425;old_locus_tag=YPN_r055 NC_008149.1 tRNAscan-SE tRNA 1588507 1588582 . - . ID=rna48;Parent=gene1484;anticodon=(pos:complement(1588547..1588549));gbkey=tRNA;product=tRNA-Ala NC_008149.1 tRNAscan-SE exon 1588507 1588582 . - . ID=id141;Parent=rna48;anticodon=(pos:complement(1588547..1588549));gbkey=tRNA;product=tRNA-Ala NC_008149.1 RefSeq gene 1588660 1588735 . - . ID=gene1485;Name=YPN_RS07430;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS07430;old_locus_tag=YPN_r056 NC_008149.1 tRNAscan-SE tRNA 1588660 1588735 . - . ID=rna49;Parent=gene1485;anticodon=(pos:complement(1588700..1588702));gbkey=tRNA;product=tRNA-Ala NC_008149.1 tRNAscan-SE exon 1588660 1588735 . - . ID=id142;Parent=rna49;anticodon=(pos:complement(1588700..1588702));gbkey=tRNA;product=tRNA-Ala NC_008149.1 RefSeq repeat_region 1588916 1589640 . + . ID=id143;gbkey=repeat_region NC_008149.1 RefSeq gene 1589026 1589484 . - . ID=gene1486;Name=YPN_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07435;old_locus_tag=YPN_1397 NC_008149.1 Protein Homology CDS 1589026 1589484 . - 0 ID=cds1434;Parent=gene1486;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1589677 1591092 . - . ID=gene1487;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=YPN_RS07440;old_locus_tag=YPN_1398 NC_008149.1 Protein Homology CDS 1589677 1591092 . - 0 ID=cds1435;Parent=gene1487;Dbxref=Genbank:WP_002222185.1;Name=WP_002222185.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=WP_002222185.1;transl_table=11 NC_008149.1 RefSeq gene 1591367 1591442 . + . ID=gene1488;Name=YPN_RS07445;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS07445;old_locus_tag=YPN_r057 NC_008149.1 tRNAscan-SE tRNA 1591367 1591442 . + . ID=rna50;Parent=gene1488;anticodon=(pos:1591400..1591402);gbkey=tRNA;product=tRNA-Val NC_008149.1 tRNAscan-SE exon 1591367 1591442 . + . ID=id144;Parent=rna50;anticodon=(pos:1591400..1591402);gbkey=tRNA;product=tRNA-Val NC_008149.1 RefSeq gene 1591479 1591554 . + . ID=gene1489;Name=YPN_RS07450;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS07450;old_locus_tag=YPN_r058 NC_008149.1 tRNAscan-SE tRNA 1591479 1591554 . + . ID=rna51;Parent=gene1489;anticodon=(pos:1591512..1591514);gbkey=tRNA;product=tRNA-Val NC_008149.1 tRNAscan-SE exon 1591479 1591554 . + . ID=id145;Parent=rna51;anticodon=(pos:1591512..1591514);gbkey=tRNA;product=tRNA-Val NC_008149.1 RefSeq gene 1591599 1591674 . + . ID=gene1490;Name=YPN_RS07455;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS07455;old_locus_tag=YPN_r059 NC_008149.1 tRNAscan-SE tRNA 1591599 1591674 . + . ID=rna52;Parent=gene1490;anticodon=(pos:1591632..1591634);gbkey=tRNA;product=tRNA-Val NC_008149.1 tRNAscan-SE exon 1591599 1591674 . + . ID=id146;Parent=rna52;anticodon=(pos:1591632..1591634);gbkey=tRNA;product=tRNA-Val NC_008149.1 RefSeq gene 1591874 1591949 . + . ID=gene1491;Name=YPN_RS07460;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS07460;old_locus_tag=YPN_r060 NC_008149.1 tRNAscan-SE tRNA 1591874 1591949 . + . ID=rna53;Parent=gene1491;anticodon=(pos:1591907..1591909);gbkey=tRNA;product=tRNA-Lys NC_008149.1 tRNAscan-SE exon 1591874 1591949 . + . ID=id147;Parent=rna53;anticodon=(pos:1591907..1591909);gbkey=tRNA;product=tRNA-Lys NC_008149.1 RefSeq gene 1592326 1593510 . - . ID=gene1492;Name=YPN_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07465;old_locus_tag=YPN_1399 NC_008149.1 Protein Homology CDS 1592326 1593510 . - 0 ID=cds1436;Parent=gene1492;Dbxref=Genbank:WP_002211622.1;Name=WP_002211622.1;gbkey=CDS;product=nucleoside permease;protein_id=WP_002211622.1;transl_table=11 NC_008149.1 RefSeq gene 1593961 1595190 . + . ID=gene1493;Name=YPN_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07470;old_locus_tag=YPN_1400 NC_008149.1 Protein Homology CDS 1593961 1595190 . + 0 ID=cds1437;Parent=gene1493;Dbxref=Genbank:WP_002211621.1;Name=WP_002211621.1;gbkey=CDS;product=divalent metal cation transporter MntH;protein_id=WP_002211621.1;transl_table=11 NC_008149.1 RefSeq gene 1595283 1595597 . - . ID=gene1494;Name=YPN_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07475;old_locus_tag=YPN_1401 NC_008149.1 Protein Homology CDS 1595283 1595597 . - 0 ID=cds1438;Parent=gene1494;Dbxref=Genbank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354622.1;transl_table=11 NC_008149.1 RefSeq gene 1595867 1596856 . - . ID=gene1495;Name=YPN_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07480;old_locus_tag=YPN_1402 NC_008149.1 Protein Homology CDS 1595867 1596856 . - 0 ID=cds1439;Parent=gene1495;Dbxref=Genbank:WP_002211618.1;Name=WP_002211618.1;gbkey=CDS;product=glyceraldehyde 3-phosphate reductase;protein_id=WP_002211618.1;transl_table=11 NC_008149.1 RefSeq gene 1596992 1597870 . - . ID=gene1496;Name=YPN_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07485;old_locus_tag=YPN_1403 NC_008149.1 Protein Homology CDS 1596992 1597870 . - 0 ID=cds1440;Parent=gene1496;Dbxref=Genbank:WP_002211617.1;Name=WP_002211617.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211617.1;transl_table=11 NC_008149.1 RefSeq gene 1597973 1598449 . + . ID=gene1497;Name=YPN_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07490;old_locus_tag=YPN_1404 NC_008149.1 Protein Homology CDS 1597973 1598449 . + 0 ID=cds1441;Parent=gene1497;Dbxref=Genbank:WP_002211616.1;Name=WP_002211616.1;gbkey=CDS;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=WP_002211616.1;transl_table=11 NC_008149.1 RefSeq gene 1598630 1599601 . + . ID=gene1498;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=YPN_RS07495;old_locus_tag=YPN_1405 NC_008149.1 Protein Homology CDS 1598630 1599601 . + 0 ID=cds1442;Parent=gene1498;Dbxref=Genbank:WP_002211615.1;Name=WP_002211615.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=WP_002211615.1;transl_table=11 NC_008149.1 RefSeq gene 1599679 1600926 . - . ID=gene1499;Name=YPN_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07500;old_locus_tag=YPN_1406 NC_008149.1 Protein Homology CDS 1599679 1600926 . - 0 ID=cds1443;Parent=gene1499;Dbxref=Genbank:WP_002211614.1;Name=WP_002211614.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211614.1;transl_table=11 NC_008149.1 RefSeq gene 1601192 1602427 . + . ID=gene1500;Name=YPN_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07505;old_locus_tag=YPN_1407 NC_008149.1 Protein Homology CDS 1601192 1602427 . + 0 ID=cds1444;Parent=gene1500;Dbxref=Genbank:WP_002211613.1;Name=WP_002211613.1;gbkey=CDS;product=aminotransferase;protein_id=WP_002211613.1;transl_table=11 NC_008149.1 RefSeq gene 1602691 1603215 . + . ID=gene1501;Name=YPN_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07510;old_locus_tag=YPN_1408 NC_008149.1 Protein Homology CDS 1602691 1603215 . + 0 ID=cds1445;Parent=gene1501;Dbxref=Genbank:WP_002211611.1;Name=WP_002211611.1;gbkey=CDS;product=cytochrome B;protein_id=WP_002211611.1;transl_table=11 NC_008149.1 RefSeq gene 1603310 1603741 . - . ID=gene1502;Name=YPN_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07515;old_locus_tag=YPN_1409 NC_008149.1 Protein Homology CDS 1603310 1603741 . - 0 ID=cds1446;Parent=gene1502;Dbxref=Genbank:WP_002211610.1;Name=WP_002211610.1;gbkey=CDS;product=antitoxin HicB;protein_id=WP_002211610.1;transl_table=11 NC_008149.1 RefSeq gene 1604331 1605002 . + . ID=gene1503;Name=YPN_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07520;old_locus_tag=YPN_1410 NC_008149.1 Protein Homology CDS 1604331 1605002 . + 0 ID=cds1447;Parent=gene1503;Dbxref=Genbank:WP_002215847.1;Name=WP_002215847.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215847.1;transl_table=11 NC_008149.1 RefSeq gene 1605029 1605385 . + . ID=gene1504;Name=YPN_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07525;old_locus_tag=YPN_1411 NC_008149.1 Protein Homology CDS 1605029 1605385 . + 0 ID=cds1448;Parent=gene1504;Dbxref=Genbank:WP_002215846.1;Name=WP_002215846.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215846.1;transl_table=11 NC_008149.1 RefSeq gene 1605382 1606038 . + . ID=gene1505;Name=YPN_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07530;old_locus_tag=YPN_1412 NC_008149.1 Protein Homology CDS 1605382 1606038 . + 0 ID=cds1449;Parent=gene1505;Dbxref=Genbank:WP_002211607.1;Name=WP_002211607.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211607.1;transl_table=11 NC_008149.1 RefSeq gene 1606284 1606853 . - . ID=gene1506;Name=YPN_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07535;old_locus_tag=YPN_1413 NC_008149.1 Protein Homology CDS 1606284 1606853 . - 0 ID=cds1450;Parent=gene1506;Dbxref=Genbank:WP_002211606.1;Name=WP_002211606.1;gbkey=CDS;product=(Fe-S)-binding protein;protein_id=WP_002211606.1;transl_table=11 NC_008149.1 RefSeq gene 1606850 1607446 . - . ID=gene1507;Name=YPN_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07540;old_locus_tag=YPN_1414 NC_008149.1 Protein Homology CDS 1606850 1607446 . - 0 ID=cds1451;Parent=gene1507;Dbxref=Genbank:WP_002228419.1;Name=WP_002228419.1;gbkey=CDS;product=nitrate reductase subunit delta;protein_id=WP_002228419.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1607472 1607822 . + . ID=id148;gbkey=repeat_region NC_008149.1 RefSeq gene 1607928 1608704 . - . ID=gene1508;Name=YPN_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07545;old_locus_tag=YPN_1415 NC_008149.1 Protein Homology CDS 1607928 1608704 . - 0 ID=cds1452;Parent=gene1508;Dbxref=Genbank:WP_002211604.1;Name=WP_002211604.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002211604.1;transl_table=11 NC_008149.1 RefSeq gene 1608706 1609323 . - . ID=gene1509;Name=YPN_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07550;old_locus_tag=YPN_1416 NC_008149.1 Protein Homology CDS 1608706 1609323 . - 0 ID=cds1453;Parent=gene1509;Dbxref=Genbank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit B;protein_id=WP_002211603.1;transl_table=11 NC_008149.1 RefSeq gene 1609335 1611761 . - . ID=gene1510;Name=YPN_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07555;old_locus_tag=YPN_1417 NC_008149.1 Protein Homology CDS 1609335 1611761 . - 0 ID=cds1454;Parent=gene1510;Dbxref=Genbank:WP_002228420.1;Name=WP_002228420.1;gbkey=CDS;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_002228420.1;transl_table=11 NC_008149.1 RefSeq gene 1612592 1613440 . + . ID=gene1511;Name=YPN_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07560;old_locus_tag=YPN_1418 NC_008149.1 Protein Homology CDS 1612592 1613440 . + 0 ID=cds1455;Parent=gene1511;Dbxref=Genbank:WP_002211601.1;Name=WP_002211601.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211601.1;transl_table=11 NC_008149.1 RefSeq gene 1613670 1614149 . - . ID=gene1512;Name=YPN_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07565;old_locus_tag=YPN_1419 NC_008149.1 Protein Homology CDS 1613670 1614149 . - 0 ID=cds1456;Parent=gene1512;Dbxref=Genbank:WP_002354621.1;Name=WP_002354621.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354621.1;transl_table=11 NC_008149.1 RefSeq gene 1614616 1615140 . + . ID=gene1513;Name=YPN_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07570;old_locus_tag=YPN_1420 NC_008149.1 Protein Homology CDS 1614616 1615140 . + 0 ID=cds1457;Parent=gene1513;Dbxref=Genbank:WP_002211599.1;Name=WP_002211599.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211599.1;transl_table=11 NC_008149.1 RefSeq gene 1615213 1616262 . - . ID=gene1514;Name=YPN_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07575;old_locus_tag=YPN_1421 NC_008149.1 Protein Homology CDS 1615213 1616262 . - 0 ID=cds1458;Parent=gene1514;Dbxref=Genbank:WP_002211598.1;Name=WP_002211598.1;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=WP_002211598.1;transl_table=11 NC_008149.1 RefSeq gene 1616259 1617845 . - . ID=gene1515;Name=YPN_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07580;old_locus_tag=YPN_1422 NC_008149.1 Protein Homology CDS 1616259 1617845 . - 0 ID=cds1459;Parent=gene1515;Dbxref=Genbank:WP_002215840.1;Name=WP_002215840.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002215840.1;transl_table=11 NC_008149.1 RefSeq gene 1617901 1618920 . - . ID=gene1516;Name=YPN_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07585;old_locus_tag=YPN_1423 NC_008149.1 Protein Homology CDS 1617901 1618920 . - 0 ID=cds1460;Parent=gene1516;Dbxref=Genbank:WP_002211596.1;Name=WP_002211596.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211596.1;transl_table=11 NC_008149.1 RefSeq gene 1619249 1620343 . + . ID=gene1517;Name=YPN_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07590;old_locus_tag=YPN_1424 NC_008149.1 Protein Homology CDS 1619249 1620343 . + 0 ID=cds1461;Parent=gene1517;Dbxref=Genbank:WP_002211594.1;Name=WP_002211594.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;product=murein hydrolase B;protein_id=WP_002211594.1;transl_table=11 NC_008149.1 RefSeq gene 1621609 1622211 . + . ID=gene1518;Name=YPN_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07595;old_locus_tag=YPN_1425 NC_008149.1 Protein Homology CDS 1621609 1622211 . + 0 ID=cds1462;Parent=gene1518;Dbxref=Genbank:WP_002211590.1;Name=WP_002211590.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211590.1;transl_table=11 NC_008149.1 RefSeq gene 1622569 1623051 . - . ID=gene1519;Name=YPN_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07600;old_locus_tag=YPN_1426 NC_008149.1 Protein Homology CDS 1622569 1623051 . - 0 ID=cds1463;Parent=gene1519;Dbxref=Genbank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215321.1;transl_table=11 NC_008149.1 RefSeq gene 1623048 1624730 . - . ID=gene1520;Name=YPN_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07605;old_locus_tag=YPN_1427 NC_008149.1 Protein Homology CDS 1623048 1624730 . - 0 ID=cds1464;Parent=gene1520;Dbxref=Genbank:WP_002211588.1;Name=WP_002211588.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211588.1;transl_table=11 NC_008149.1 RefSeq gene 1624731 1625432 . - . ID=gene1521;Name=YPN_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07610;old_locus_tag=YPN_1428 NC_008149.1 Protein Homology CDS 1624731 1625432 . - 0 ID=cds1465;Parent=gene1521;Dbxref=Genbank:WP_002224806.1;Name=WP_002224806.1;gbkey=CDS;product=membrane protein;protein_id=WP_002224806.1;transl_table=11 NC_008149.1 RefSeq gene 1625429 1626766 . - . ID=gene1522;Name=YPN_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07615;old_locus_tag=YPN_1429 NC_008149.1 Protein Homology CDS 1625429 1626766 . - 0 ID=cds1466;Parent=gene1522;Dbxref=Genbank:WP_002211586.1;Name=WP_002211586.1;gbkey=CDS;product=glycosyltransferase;protein_id=WP_002211586.1;transl_table=11 NC_008149.1 RefSeq gene 1626806 1627837 . - . ID=gene1523;Name=YPN_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07620;old_locus_tag=YPN_1430 NC_008149.1 Protein Homology CDS 1626806 1627837 . - 0 ID=cds1467;Parent=gene1523;Dbxref=Genbank:WP_002215319.1;Name=WP_002215319.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215319.1;transl_table=11 NC_008149.1 RefSeq gene 1627844 1629025 . - . ID=gene1524;Name=YPN_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07625;old_locus_tag=YPN_1431 NC_008149.1 Protein Homology CDS 1627844 1629025 . - 0 ID=cds1468;Parent=gene1524;Dbxref=Genbank:WP_002228423.1;Name=WP_002228423.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228423.1;transl_table=11 NC_008149.1 RefSeq gene 1629124 1630149 . - . ID=gene1525;Name=YPN_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07630;old_locus_tag=YPN_1432 NC_008149.1 Protein Homology CDS 1629124 1630149 . - 0 ID=cds1469;Parent=gene1525;Dbxref=Genbank:WP_002211583.1;Name=WP_002211583.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211583.1;transl_table=11 NC_008149.1 RefSeq gene 1630149 1632029 . - . ID=gene1526;Name=YPN_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07635;old_locus_tag=YPN_1433 NC_008149.1 Protein Homology CDS 1630149 1632029 . - 0 ID=cds1470;Parent=gene1526;Dbxref=Genbank:WP_002211582.1;Name=WP_002211582.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211582.1;transl_table=11 NC_008149.1 RefSeq gene 1632812 1635487 . + . ID=gene1527;Name=YPN_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07640;old_locus_tag=YPN_1434 NC_008149.1 Protein Homology CDS 1632812 1635487 . + 0 ID=cds1471;Parent=gene1527;Dbxref=Genbank:WP_002215317.1;Name=WP_002215317.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_002215317.1;transl_table=11 NC_008149.1 RefSeq gene 1635688 1636233 . + . ID=gene1528;Name=YPN_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07645;old_locus_tag=YPN_1435 NC_008149.1 Protein Homology CDS 1635688 1636233 . + 0 ID=cds1472;Parent=gene1528;Dbxref=Genbank:WP_002211580.1;Name=WP_002211580.1;gbkey=CDS;product=frimbrial protein;protein_id=WP_002211580.1;transl_table=11 NC_008149.1 RefSeq gene 1636390 1637151 . + . ID=gene1529;Name=YPN_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07650;old_locus_tag=YPN_1436 NC_008149.1 Protein Homology CDS 1636390 1637151 . + 0 ID=cds1473;Parent=gene1529;Dbxref=Genbank:WP_002211579.1;Name=WP_002211579.1;gbkey=CDS;product=pilus assembly protein;protein_id=WP_002211579.1;transl_table=11 NC_008149.1 RefSeq gene 1637279 1638829 . + . ID=gene1530;Name=YPN_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07655;old_locus_tag=YPN_1437 NC_008149.1 Protein Homology CDS 1637279 1638829 . + 0 ID=cds1474;Parent=gene1530;Dbxref=Genbank:WP_002215157.1;Name=WP_002215157.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002215157.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1638812 1640131 . + . ID=id149;gbkey=repeat_region NC_008149.1 RefSeq gene 1638851 1640058 . - . ID=gene1531;Name=YPN_RS07660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS07660;pseudo=true NC_008149.1 Protein Homology CDS 1638851 1640058 . - 0 ID=cds1475;Parent=gene1531;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 1640083 1641273 . + . ID=gene1532;Name=YPN_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07665;old_locus_tag=YPN_1440 NC_008149.1 Protein Homology CDS 1640083 1641273 . + 0 ID=cds1476;Parent=gene1532;Dbxref=Genbank:WP_002211577.1;Name=WP_002211577.1;gbkey=CDS;product=fimbrial usher protein;protein_id=WP_002211577.1;transl_table=11 NC_008149.1 RefSeq gene 1641258 1641866 . + . ID=gene1533;Name=YPN_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07670;old_locus_tag=YPN_1441 NC_008149.1 Protein Homology CDS 1641258 1641866 . + 0 ID=cds1477;Parent=gene1533;Dbxref=Genbank:WP_002211576.1;Name=WP_002211576.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002211576.1;transl_table=11 NC_008149.1 RefSeq gene 1641971 1642495 . + . ID=gene1534;Name=YPN_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07675;old_locus_tag=YPN_1442 NC_008149.1 Protein Homology CDS 1641971 1642495 . + 0 ID=cds1478;Parent=gene1534;Dbxref=Genbank:WP_002211575.1;Name=WP_002211575.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211575.1;transl_table=11 NC_008149.1 RefSeq gene 1642519 1644021 . + . ID=gene1535;Name=YPN_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07680;old_locus_tag=YPN_1443 NC_008149.1 Protein Homology CDS 1642519 1644021 . + 0 ID=cds1479;Parent=gene1535;Dbxref=Genbank:WP_002211574.1;Name=WP_002211574.1;gbkey=CDS;product=type VI secretion protein EvpB;protein_id=WP_002211574.1;transl_table=11 NC_008149.1 RefSeq gene 1644347 1644832 . + . ID=gene1536;Name=YPN_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07685;old_locus_tag=YPN_1444 NC_008149.1 Protein Homology CDS 1644347 1644832 . + 0 ID=cds1480;Parent=gene1536;Dbxref=Genbank:WP_002211573.1;Name=WP_002211573.1;gbkey=CDS;product=type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11 NC_008149.1 RefSeq gene 1645106 1645645 . + . ID=gene1537;Name=YPN_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07690;old_locus_tag=YPN_1445 NC_008149.1 Protein Homology CDS 1645106 1645645 . + 0 ID=cds1481;Parent=gene1537;Dbxref=Genbank:WP_002211572.1;Name=WP_002211572.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211572.1;transl_table=11 NC_008149.1 RefSeq gene 1645649 1646998 . + . ID=gene1538;Name=YPN_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07695;old_locus_tag=YPN_1446 NC_008149.1 Protein Homology CDS 1645649 1646998 . + 0 ID=cds1482;Parent=gene1538;Dbxref=Genbank:WP_002211571.1;Name=WP_002211571.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002211571.1;transl_table=11 NC_008149.1 RefSeq gene 1646995 1647663 . + . ID=gene1539;Name=YPN_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07700;old_locus_tag=YPN_1447 NC_008149.1 Protein Homology CDS 1646995 1647663 . + 0 ID=cds1483;Parent=gene1539;Dbxref=Genbank:WP_002215165.1;Name=WP_002215165.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215165.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1647587 1649546 . + . ID=id150;gbkey=repeat_region NC_008149.1 RefSeq gene 1647677 1648699 . + . ID=gene1540;Name=YPN_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07705;old_locus_tag=YPN_1448 NC_008149.1 Protein Homology CDS 1647677 1648699 . + 0 ID=cds1484;Parent=gene1540;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 1648699 1649478 . + . ID=gene1541;Name=YPN_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07710;old_locus_tag=YPN_1449 NC_008149.1 Protein Homology CDS 1648699 1649478 . + 0 ID=cds1485;Parent=gene1541;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 1650023 1650829 . - . ID=gene1542;Name=YPN_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07715;old_locus_tag=YPN_1451 NC_008149.1 Protein Homology CDS 1650023 1650829 . - 0 ID=cds1486;Parent=gene1542;Dbxref=Genbank:WP_002211282.1;Name=WP_002211282.1;gbkey=CDS;product=N-formylglutamate deformylase;protein_id=WP_002211282.1;transl_table=11 NC_008149.1 RefSeq gene 1650826 1652046 . - . ID=gene1543;Name=YPN_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07720;old_locus_tag=YPN_1452 NC_008149.1 Protein Homology CDS 1650826 1652046 . - 0 ID=cds1487;Parent=gene1543;Dbxref=Genbank:WP_002211281.1;Name=WP_002211281.1;Note=catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway;gbkey=CDS;product=imidazolonepropionase;protein_id=WP_002211281.1;transl_table=11 NC_008149.1 RefSeq gene 1652250 1653017 . - . ID=gene1544;Name=YPN_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07725;old_locus_tag=YPN_1453 NC_008149.1 Protein Homology CDS 1652250 1653017 . - 0 ID=cds1488;Parent=gene1544;Dbxref=Genbank:WP_002211280.1;Name=WP_002211280.1;gbkey=CDS;product=histidine utilization repressor;protein_id=WP_002211280.1;transl_table=11 NC_008149.1 RefSeq gene 1653165 1654535 . + . ID=gene1545;Name=YPN_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07730;old_locus_tag=YPN_1454 NC_008149.1 Protein Homology CDS 1653165 1654535 . + 0 ID=cds1489;Parent=gene1545;Dbxref=Genbank:WP_002211279.1;Name=WP_002211279.1;Note=catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate;gbkey=CDS;product=N-formimino-L-glutamate deiminase;protein_id=WP_002211279.1;transl_table=11 NC_008149.1 RefSeq gene 1654535 1655107 . + . ID=gene1546;Name=YPN_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07735;old_locus_tag=YPN_1455 NC_008149.1 Protein Homology CDS 1654535 1655107 . + 0 ID=cds1490;Parent=gene1546;Dbxref=Genbank:WP_002211278.1;Name=WP_002211278.1;gbkey=CDS;product=cold inducible protein Ves;protein_id=WP_002211278.1;transl_table=11 NC_008149.1 RefSeq gene 1655285 1656889 . - . ID=gene1547;Name=YPN_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07740;old_locus_tag=YPN_1456 NC_008149.1 Protein Homology CDS 1655285 1656889 . - 0 ID=cds1491;Parent=gene1547;Dbxref=Genbank:WP_002211277.1;Name=WP_002211277.1;gbkey=CDS;product=chorismate-binding enzyme domain protein;protein_id=WP_002211277.1;transl_table=11 NC_008149.1 RefSeq gene 1657886 1658395 . + . ID=gene1548;Name=YPN_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07745;old_locus_tag=YPN_1457 NC_008149.1 Protein Homology CDS 1657886 1658395 . + 0 ID=cds1492;Parent=gene1548;Dbxref=Genbank:WP_002214339.1;Name=WP_002214339.1;gbkey=CDS;product=thiolase;protein_id=WP_002214339.1;transl_table=11 NC_008149.1 RefSeq gene 1658364 1658894 . + . ID=gene1549;Name=YPN_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07750;old_locus_tag=YPN_1458 NC_008149.1 Protein Homology CDS 1658364 1658894 . + 0 ID=cds1493;Parent=gene1549;Dbxref=Genbank:WP_002214337.1;Name=WP_002214337.1;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002214337.1;transl_table=11 NC_008149.1 RefSeq gene 1658908 1659924 . + . ID=gene1550;Name=YPN_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07755;old_locus_tag=YPN_1459 NC_008149.1 Protein Homology CDS 1658908 1659924 . + 0 ID=cds1494;Parent=gene1550;Dbxref=Genbank:WP_002211275.1;Name=WP_002211275.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211275.1;transl_table=11 NC_008149.1 RefSeq gene 1659917 1660723 . + . ID=gene1551;Name=YPN_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07760;old_locus_tag=YPN_1460 NC_008149.1 Protein Homology CDS 1659917 1660723 . + 0 ID=cds1495;Parent=gene1551;Dbxref=Genbank:WP_002214335.1;Name=WP_002214335.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002214335.1;transl_table=11 NC_008149.1 RefSeq gene 1660720 1662006 . + . ID=gene1552;Name=YPN_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07765;old_locus_tag=YPN_1461 NC_008149.1 Protein Homology CDS 1660720 1662006 . + 0 ID=cds1496;Parent=gene1552;Dbxref=Genbank:WP_002211273.1;Name=WP_002211273.1;gbkey=CDS;product=coenzyme F390 synthetase;protein_id=WP_002211273.1;transl_table=11 NC_008149.1 RefSeq gene 1662140 1663102 . + . ID=gene1553;Name=YPN_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07770;old_locus_tag=YPN_1462 NC_008149.1 Protein Homology CDS 1662140 1663102 . + 0 ID=cds1497;Parent=gene1553;Dbxref=Genbank:WP_002211271.1;Name=WP_002211271.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211271.1;transl_table=11 NC_008149.1 RefSeq gene 1663102 1664256 . + . ID=gene1554;Name=YPN_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07775;old_locus_tag=YPN_1463 NC_008149.1 Protein Homology CDS 1663102 1664256 . + 0 ID=cds1498;Parent=gene1554;Dbxref=Genbank:WP_002214329.1;Name=WP_002214329.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002214329.1;transl_table=11 NC_008149.1 RefSeq gene 1664253 1664837 . + . ID=gene1555;Name=YPN_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07780;old_locus_tag=YPN_1464 NC_008149.1 Protein Homology CDS 1664253 1664837 . + 0 ID=cds1499;Parent=gene1555;Dbxref=Genbank:WP_002211270.1;Name=WP_002211270.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211270.1;transl_table=11 NC_008149.1 RefSeq gene 1664834 1666021 . + . ID=gene1556;Name=YPN_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07785;old_locus_tag=YPN_1465 NC_008149.1 Protein Homology CDS 1664834 1666021 . + 0 ID=cds1500;Parent=gene1556;Dbxref=Genbank:WP_002211269.1;Name=WP_002211269.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002211269.1;transl_table=11 NC_008149.1 RefSeq gene 1666182 1666646 . - . ID=gene1557;Name=YPN_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07790;old_locus_tag=YPN_1466 NC_008149.1 Protein Homology CDS 1666182 1666646 . - 0 ID=cds1501;Parent=gene1557;Dbxref=Genbank:WP_002211268.1;Name=WP_002211268.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211268.1;transl_table=11 NC_008149.1 RefSeq gene 1666816 1668474 . - . ID=gene1558;Name=YPN_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07795;old_locus_tag=YPN_1467 NC_008149.1 Protein Homology CDS 1666816 1668474 . - 0 ID=cds1502;Parent=gene1558;Dbxref=Genbank:WP_002211267.1;Name=WP_002211267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211267.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1668520 1669839 . + . ID=id151;gbkey=repeat_region NC_008149.1 RefSeq gene 1668593 1669801 . + . ID=gene1559;Name=YPN_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07800;old_locus_tag=YPN_1468 NC_008149.1 Protein Homology CDS 1668593 1669801 . + 0 ID=cds1503;Parent=gene1559;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 1669921 1672083 . - . ID=gene1560;Name=YPN_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07805;old_locus_tag=YPN_1469 NC_008149.1 Protein Homology CDS 1669921 1672083 . - 0 ID=cds1504;Parent=gene1560;Dbxref=Genbank:WP_002211266.1;Name=WP_002211266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211266.1;transl_table=11 NC_008149.1 RefSeq gene 1672661 1674772 . + . ID=gene1561;Name=YPN_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07810;old_locus_tag=YPN_1470 NC_008149.1 Protein Homology CDS 1672661 1674772 . + 0 ID=cds1505;Parent=gene1561;Dbxref=Genbank:WP_002224461.1;Name=WP_002224461.1;gbkey=CDS;product=membrane protein;protein_id=WP_002224461.1;transl_table=11 NC_008149.1 RefSeq gene 1674775 1674963 . - . ID=gene1562;Name=YPN_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07815 NC_008149.1 Protein Homology CDS 1674775 1674963 . - 0 ID=cds1506;Parent=gene1562;Dbxref=Genbank:WP_002211264.1;Name=WP_002211264.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211264.1;transl_table=11 NC_008149.1 RefSeq gene 1675019 1675657 . + . ID=gene1563;Name=YPN_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07820;old_locus_tag=YPN_1471 NC_008149.1 Protein Homology CDS 1675019 1675657 . + 0 ID=cds1507;Parent=gene1563;Dbxref=Genbank:WP_002211263.1;Name=WP_002211263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211263.1;transl_table=11 NC_008149.1 RefSeq gene 1675792 1676451 . - . ID=gene1564;Name=YPN_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07825;old_locus_tag=YPN_1472 NC_008149.1 Protein Homology CDS 1675792 1676451 . - 0 ID=cds1508;Parent=gene1564;Dbxref=Genbank:WP_002211262.1;Name=WP_002211262.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002211262.1;transl_table=11 NC_008149.1 RefSeq gene 1676556 1677236 . - . ID=gene1565;Name=YPN_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07830;old_locus_tag=YPN_1473 NC_008149.1 Protein Homology CDS 1676556 1677236 . - 0 ID=cds1509;Parent=gene1565;Dbxref=Genbank:WP_002211261.1;Name=WP_002211261.1;gbkey=CDS;product=dehydrogenase;protein_id=WP_002211261.1;transl_table=11 NC_008149.1 RefSeq gene 1677577 1678527 . - . ID=gene1566;Name=YPN_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07835;old_locus_tag=YPN_1474 NC_008149.1 Protein Homology CDS 1677577 1678527 . - 0 ID=cds1510;Parent=gene1566;Dbxref=Genbank:WP_002211260.1;Name=WP_002211260.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211260.1;transl_table=11 NC_008149.1 RefSeq gene 1678514 1679446 . - . ID=gene1567;Name=YPN_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07840;old_locus_tag=YPN_1475 NC_008149.1 Protein Homology CDS 1678514 1679446 . - 0 ID=cds1511;Parent=gene1567;Dbxref=Genbank:WP_002211259.1;Name=WP_002211259.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211259.1;transl_table=11 NC_008149.1 RefSeq gene 1679452 1680357 . - . ID=gene1568;Name=YPN_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07845;old_locus_tag=YPN_1476 NC_008149.1 Protein Homology CDS 1679452 1680357 . - 0 ID=cds1512;Parent=gene1568;Dbxref=Genbank:WP_002211258.1;Name=WP_002211258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211258.1;transl_table=11 NC_008149.1 RefSeq gene 1681148 1682221 . - . ID=gene1569;Name=YPN_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07850;old_locus_tag=YPN_1477 NC_008149.1 Protein Homology CDS 1681148 1682221 . - 0 ID=cds1513;Parent=gene1569;Dbxref=Genbank:WP_002211257.1;Name=WP_002211257.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002211257.1;transl_table=11 NC_008149.1 RefSeq gene 1682434 1682904 . - . ID=gene1570;Name=YPN_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07855;old_locus_tag=YPN_1478 NC_008149.1 Protein Homology CDS 1682434 1682904 . - 0 ID=cds1514;Parent=gene1570;Dbxref=Genbank:WP_002211256.1;Name=WP_002211256.1;gbkey=CDS;product=cupin;protein_id=WP_002211256.1;transl_table=11 NC_008149.1 RefSeq gene 1682959 1683381 . - . ID=gene1571;Name=YPN_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07860;old_locus_tag=YPN_1479 NC_008149.1 Protein Homology CDS 1682959 1683381 . - 0 ID=cds1515;Parent=gene1571;Dbxref=Genbank:WP_002211255.1;Name=WP_002211255.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002211255.1;transl_table=11 NC_008149.1 RefSeq gene 1683658 1685043 . - . ID=gene1572;Name=YPN_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07865;old_locus_tag=YPN_1480 NC_008149.1 Protein Homology CDS 1683658 1685043 . - 0 ID=cds1516;Parent=gene1572;Dbxref=Genbank:WP_002211254.1;Name=WP_002211254.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002211254.1;transl_table=11 NC_008149.1 RefSeq gene 1685055 1685747 . - . ID=gene1573;Name=YPN_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07870;old_locus_tag=YPN_1481 NC_008149.1 Protein Homology CDS 1685055 1685747 . - 0 ID=cds1517;Parent=gene1573;Dbxref=Genbank:WP_002211253.1;Name=WP_002211253.1;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211253.1;transl_table=11 NC_008149.1 RefSeq gene 1686012 1687103 . + . ID=gene1574;Name=YPN_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07875;old_locus_tag=YPN_1482 NC_008149.1 Protein Homology CDS 1686012 1687103 . + 0 ID=cds1518;Parent=gene1574;Dbxref=Genbank:WP_002211252.1;Name=WP_002211252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211252.1;transl_table=11 NC_008149.1 RefSeq gene 1687294 1687959 . + . ID=gene1575;Name=YPN_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07880;old_locus_tag=YPN_1483 NC_008149.1 Protein Homology CDS 1687294 1687959 . + 0 ID=cds1519;Parent=gene1575;Dbxref=Genbank:WP_002211251.1;Name=WP_002211251.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002211251.1;transl_table=11 NC_008149.1 RefSeq gene 1687974 1688669 . + . ID=gene1576;Name=YPN_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07885;old_locus_tag=YPN_1484 NC_008149.1 Protein Homology CDS 1687974 1688669 . + 0 ID=cds1520;Parent=gene1576;Dbxref=Genbank:WP_002211250.1;Name=WP_002211250.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211250.1;transl_table=11 NC_008149.1 RefSeq gene 1688878 1689720 . - . ID=gene1577;Name=YPN_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07890;old_locus_tag=YPN_1485 NC_008149.1 Protein Homology CDS 1688878 1689720 . - 0 ID=cds1521;Parent=gene1577;Dbxref=Genbank:WP_002211249.1;Name=WP_002211249.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211249.1;transl_table=11 NC_008149.1 RefSeq gene 1690351 1691007 . + . ID=gene1578;Name=YPN_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07895;old_locus_tag=YPN_1486 NC_008149.1 Protein Homology CDS 1690351 1691007 . + 0 ID=cds1522;Parent=gene1578;Dbxref=Genbank:WP_002216887.1;Name=WP_002216887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216887.1;transl_table=11 NC_008149.1 RefSeq gene 1691004 1691834 . + . ID=gene1579;Name=YPN_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07900;old_locus_tag=YPN_1487 NC_008149.1 Protein Homology CDS 1691004 1691834 . + 0 ID=cds1523;Parent=gene1579;Dbxref=Genbank:WP_002211248.1;Name=WP_002211248.1;gbkey=CDS;product=esterase;protein_id=WP_002211248.1;transl_table=11 NC_008149.1 RefSeq gene 1691842 1692240 . + . ID=gene1580;Name=YPN_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07905;old_locus_tag=YPN_1488 NC_008149.1 Protein Homology CDS 1691842 1692240 . + 0 ID=cds1524;Parent=gene1580;Dbxref=Genbank:WP_002211247.1;Name=WP_002211247.1;gbkey=CDS;product=rhodanese;protein_id=WP_002211247.1;transl_table=11 NC_008149.1 RefSeq gene 1692288 1692797 . - . ID=gene1581;Name=YPN_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07910;old_locus_tag=YPN_1489 NC_008149.1 Protein Homology CDS 1692288 1692797 . - 0 ID=cds1525;Parent=gene1581;Dbxref=Genbank:WP_002211246.1;Name=WP_002211246.1;gbkey=CDS;product=integrase;protein_id=WP_002211246.1;transl_table=11 NC_008149.1 RefSeq gene 1692815 1693003 . - . ID=gene1582;Name=YPN_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07915 NC_008149.1 Protein Homology CDS 1692815 1693003 . - 0 ID=cds1526;Parent=gene1582;Dbxref=Genbank:WP_002354205.1;Name=WP_002354205.1;gbkey=CDS;product=transposase;protein_id=WP_002354205.1;transl_table=11 NC_008149.1 RefSeq gene 1693426 1694517 . - . ID=gene1583;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=YPN_RS07920;old_locus_tag=YPN_1491 NC_008149.1 Protein Homology CDS 1693426 1694517 . - 0 ID=cds1527;Parent=gene1583;Dbxref=Genbank:WP_002211245.1;Name=WP_002211245.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_002211245.1;transl_table=11 NC_008149.1 RefSeq gene 1694681 1695271 . - . ID=gene1584;Name=YPN_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07925;old_locus_tag=YPN_1492 NC_008149.1 Protein Homology CDS 1694681 1695271 . - 0 ID=cds1528;Parent=gene1584;Dbxref=Genbank:WP_002218168.1;Name=WP_002218168.1;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_002218168.1;transl_table=11 NC_008149.1 RefSeq gene 1695633 1695905 . + . ID=gene1585;Name=YPN_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07930;old_locus_tag=YPN_1493 NC_008149.1 Protein Homology CDS 1695633 1695905 . + 0 ID=cds1529;Parent=gene1585;Dbxref=Genbank:WP_002211242.1;Name=WP_002211242.1;Note=YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211242.1;transl_table=11 NC_008149.1 RefSeq gene 1695896 1696009 . - . ID=gene1586;Name=YPN_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07935 NC_008149.1 Protein Homology CDS 1695896 1696009 . - 0 ID=cds1530;Parent=gene1586;Dbxref=Genbank:WP_002211241.1;Name=WP_002211241.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211241.1;transl_table=11 NC_008149.1 RefSeq gene 1696107 1697054 . - . ID=gene1587;Name=YPN_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07940;old_locus_tag=YPN_1494 NC_008149.1 Protein Homology CDS 1696107 1697054 . - 0 ID=cds1531;Parent=gene1587;Dbxref=Genbank:WP_002211240.1;Name=WP_002211240.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_002211240.1;transl_table=11 NC_008149.1 RefSeq gene 1697104 1697214 . - . ID=gene1588;Name=YPN_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07945 NC_008149.1 Protein Homology CDS 1697104 1697214 . - 0 ID=cds1532;Parent=gene1588;Dbxref=Genbank:WP_002218163.1;Name=WP_002218163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218163.1;transl_table=11 NC_008149.1 RefSeq gene 1697395 1698294 . - . ID=gene1589;Name=YPN_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07950;old_locus_tag=YPN_1496 NC_008149.1 Protein Homology CDS 1697395 1698294 . - 0 ID=cds1533;Parent=gene1589;Dbxref=Genbank:WP_002211239.1;Name=WP_002211239.1;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11 NC_008149.1 RefSeq gene 1698296 1698919 . - . ID=gene1590;Name=YPN_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07955;old_locus_tag=YPN_1497 NC_008149.1 Protein Homology CDS 1698296 1698919 . - 0 ID=cds1534;Parent=gene1590;Dbxref=Genbank:WP_002224468.1;Name=WP_002224468.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_002224468.1;transl_table=11 NC_008149.1 RefSeq gene 1699225 1700487 . + . ID=gene1591;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=YPN_RS07960;old_locus_tag=YPN_1498 NC_008149.1 Protein Homology CDS 1699225 1700487 . + 0 ID=cds1535;Parent=gene1591;Dbxref=Genbank:WP_002211237.1;Name=WP_002211237.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=WP_002211237.1;transl_table=11 NC_008149.1 RefSeq gene 1700520 1701602 . + . ID=gene1592;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=YPN_RS07965;old_locus_tag=YPN_1499 NC_008149.1 Protein Homology CDS 1700520 1701602 . + 0 ID=cds1536;Parent=gene1592;Dbxref=Genbank:WP_002211236.1;Name=WP_002211236.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11 NC_008149.1 RefSeq gene 1701602 1702432 . + . ID=gene1593;Name=YPN_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07970;old_locus_tag=YPN_1500 NC_008149.1 Protein Homology CDS 1701602 1702432 . + 0 ID=cds1537;Parent=gene1593;Dbxref=Genbank:WP_002211235.1;Name=WP_002211235.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=release factor glutamine methyltransferase;protein_id=WP_002211235.1;transl_table=11 NC_008149.1 RefSeq gene 1702496 1702897 . + . ID=gene1594;Name=YPN_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07975;old_locus_tag=YPN_1501 NC_008149.1 Protein Homology CDS 1702496 1702897 . + 0 ID=cds1538;Parent=gene1594;Dbxref=Genbank:WP_002211234.1;Name=WP_002211234.1;gbkey=CDS;product=siroheme synthase;protein_id=WP_002211234.1;transl_table=11 NC_008149.1 RefSeq gene 1702894 1703703 . + . ID=gene1595;Name=YPN_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07980;old_locus_tag=YPN_1502 NC_008149.1 Protein Homology CDS 1702894 1703703 . + 0 ID=cds1539;Parent=gene1595;Dbxref=Genbank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211233.1;transl_table=11 NC_008149.1 RefSeq gene 1703799 1704653 . + . ID=gene1596;Name=YPN_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07985;old_locus_tag=YPN_1503 NC_008149.1 Protein Homology CDS 1703799 1704653 . + 0 ID=cds1540;Parent=gene1596;Dbxref=Genbank:WP_002211232.1;Name=WP_002211232.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=WP_002211232.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1704793 1704964 . + . ID=id152;gbkey=repeat_region NC_008149.1 RefSeq gene 1705007 1706704 . - . ID=gene1597;Name=YPN_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07990;old_locus_tag=YPN_1504 NC_008149.1 Protein Homology CDS 1705007 1706704 . - 0 ID=cds1541;Parent=gene1597;Dbxref=Genbank:WP_002224472.1;Name=WP_002224472.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;product=transporter;protein_id=WP_002224472.1;transl_table=11 NC_008149.1 RefSeq gene 1706943 1707239 . - . ID=gene1598;Name=YPN_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS07995 NC_008149.1 Protein Homology CDS 1706943 1707239 . - 0 ID=cds1542;Parent=gene1598;Dbxref=Genbank:WP_002217150.1;Name=WP_002217150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217150.1;transl_table=11 NC_008149.1 RefSeq gene 1707540 1707629 . - . ID=gene1599;Name=YPN_RS08000;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS08000;old_locus_tag=YPN_r061 NC_008149.1 tRNAscan-SE tRNA 1707540 1707629 . - . ID=rna54;Parent=gene1599;anticodon=(pos:complement(1707593..1707595));gbkey=tRNA;product=tRNA-Ser NC_008149.1 tRNAscan-SE exon 1707540 1707629 . - . ID=id153;Parent=rna54;anticodon=(pos:complement(1707593..1707595));gbkey=tRNA;product=tRNA-Ser NC_008149.1 RefSeq gene 1707771 1708646 . - . ID=gene1600;Name=YPN_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08005;old_locus_tag=YPN_1505 NC_008149.1 Protein Homology CDS 1707771 1708646 . - 0 ID=cds1543;Parent=gene1600;Dbxref=Genbank:WP_002211229.1;Name=WP_002211229.1;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211229.1;transl_table=11 NC_008149.1 RefSeq gene 1708947 1710029 . - . ID=gene1601;Name=YPN_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08010;old_locus_tag=YPN_1506 NC_008149.1 Protein Homology CDS 1708947 1710029 . - 0 ID=cds1544;Parent=gene1601;Dbxref=Genbank:WP_002211228.1;Name=WP_002211228.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211228.1;transl_table=11 NC_008149.1 RefSeq gene 1710049 1710885 . - . ID=gene1602;Name=YPN_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08015;old_locus_tag=YPN_1507 NC_008149.1 Protein Homology CDS 1710049 1710885 . - 0 ID=cds1545;Parent=gene1602;Dbxref=Genbank:WP_002211227.1;Name=WP_002211227.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211227.1;transl_table=11 NC_008149.1 RefSeq gene 1710882 1711748 . - . ID=gene1603;Name=YPN_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08020;old_locus_tag=YPN_1508 NC_008149.1 Protein Homology CDS 1710882 1711748 . - 0 ID=cds1546;Parent=gene1603;Dbxref=Genbank:WP_002211226.1;Name=WP_002211226.1;gbkey=CDS;product=spermidine/putrescine ABC transporter permease;protein_id=WP_002211226.1;transl_table=11 NC_008149.1 RefSeq gene 1711745 1712482 . - . ID=gene1604;Name=YPN_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08025;old_locus_tag=YPN_1509 NC_008149.1 Protein Homology CDS 1711745 1712482 . - 0 ID=cds1547;Parent=gene1604;Dbxref=Genbank:WP_002211225.1;Name=WP_002211225.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211225.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1712500 1713218 . + . ID=id154;gbkey=repeat_region NC_008149.1 RefSeq gene 1712650 1713108 . + . ID=gene1605;Name=YPN_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08030;old_locus_tag=YPN_1510 NC_008149.1 Protein Homology CDS 1712650 1713108 . + 0 ID=cds1548;Parent=gene1605;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 1713196 1713522 . - . ID=gene1606;Name=YPN_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08035;old_locus_tag=YPN_1511 NC_008149.1 Protein Homology CDS 1713196 1713522 . - 0 ID=cds1549;Parent=gene1606;Dbxref=Genbank:WP_002211224.1;Name=WP_002211224.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211224.1;transl_table=11 NC_008149.1 RefSeq gene 1713737 1714567 . + . ID=gene1607;Name=YPN_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08040;old_locus_tag=YPN_1512 NC_008149.1 Protein Homology CDS 1713737 1714567 . + 0 ID=cds1550;Parent=gene1607;Dbxref=Genbank:WP_002211223.1;Name=WP_002211223.1;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_002211223.1;transl_table=11 NC_008149.1 RefSeq gene 1714581 1715693 . + . ID=gene1608;Name=YPN_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08045;old_locus_tag=YPN_1513 NC_008149.1 Protein Homology CDS 1714581 1715693 . + 0 ID=cds1551;Parent=gene1608;Dbxref=Genbank:WP_002211222.1;Name=WP_002211222.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211222.1;transl_table=11 NC_008149.1 RefSeq gene 1715950 1716039 . - . ID=gene1609;Name=YPN_RS08050;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS08050;old_locus_tag=YPN_r062 NC_008149.1 tRNAscan-SE tRNA 1715950 1716039 . - . ID=rna55;Parent=gene1609;anticodon=(pos:complement(1716003..1716005));gbkey=tRNA;product=tRNA-Ser NC_008149.1 tRNAscan-SE exon 1715950 1716039 . - . ID=id155;Parent=rna55;anticodon=(pos:complement(1716003..1716005));gbkey=tRNA;product=tRNA-Ser NC_008149.1 RefSeq gene 1716328 1717065 . + . ID=gene1610;Name=YPN_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08055;old_locus_tag=YPN_1514 NC_008149.1 Protein Homology CDS 1716328 1717065 . + 0 ID=cds1552;Parent=gene1610;Dbxref=Genbank:WP_002211221.1;Name=WP_002211221.1;gbkey=CDS;product=phosphatase;protein_id=WP_002211221.1;transl_table=11 NC_008149.1 RefSeq gene 1717102 1717662 . + . ID=gene1611;Name=YPN_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08060;old_locus_tag=YPN_1515 NC_008149.1 Protein Homology CDS 1717102 1717662 . + 0 ID=cds1553;Parent=gene1611;Dbxref=Genbank:WP_002211220.1;Name=WP_002211220.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002211220.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1717716 1718054 . + . ID=id156;gbkey=repeat_region NC_008149.1 RefSeq gene 1718116 1718679 . - . ID=gene1612;Name=YPN_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08065;old_locus_tag=YPN_1516 NC_008149.1 Protein Homology CDS 1718116 1718679 . - 0 ID=cds1554;Parent=gene1612;Dbxref=Genbank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11 NC_008149.1 RefSeq gene 1719074 1720279 . - . ID=gene1613;Name=YPN_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08070;old_locus_tag=YPN_1517 NC_008149.1 Protein Homology CDS 1719074 1720279 . - 0 ID=cds1555;Parent=gene1613;Dbxref=Genbank:WP_002211217.1;Name=WP_002211217.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_002211217.1;transl_table=11 NC_008149.1 RefSeq gene 1720573 1721157 . + . ID=gene1614;Name=YPN_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08075;old_locus_tag=YPN_1518 NC_008149.1 Protein Homology CDS 1720573 1721157 . + 0 ID=cds1556;Parent=gene1614;Dbxref=Genbank:WP_002211216.1;Name=WP_002211216.1;gbkey=CDS;product=alanine acetyltransferase;protein_id=WP_002211216.1;transl_table=11 NC_008149.1 RefSeq gene 1721864 1722775 . + . ID=gene1615;Name=YPN_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08080 NC_008149.1 Protein Homology CDS 1721864 1722775 . + 0 ID=cds1557;Parent=gene1615;Dbxref=Genbank:WP_002354211.1;Name=WP_002354211.1;gbkey=CDS;product=virulence factor MviM;protein_id=WP_002354211.1;transl_table=11 NC_008149.1 RefSeq gene 1723042 1724577 . + . ID=gene1616;Name=YPN_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08085;old_locus_tag=YPN_1520 NC_008149.1 Protein Homology CDS 1723042 1724577 . + 0 ID=cds1558;Parent=gene1616;Dbxref=Genbank:WP_002211214.1;Name=WP_002211214.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211214.1;transl_table=11 NC_008149.1 RefSeq gene 1725065 1726726 . + . ID=gene1617;Name=YPN_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08090;old_locus_tag=YPN_1521 NC_008149.1 Protein Homology CDS 1725065 1726726 . + 0 ID=cds1559;Parent=gene1617;Dbxref=Genbank:WP_002211213.1;Name=WP_002211213.1;gbkey=CDS;product=hemolysin activation protein;protein_id=WP_002211213.1;transl_table=11 NC_008149.1 RefSeq gene 1727011 1731486 . + . ID=gene1618;Name=YPN_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08095;old_locus_tag=YPN_1522 NC_008149.1 Protein Homology CDS 1727011 1731486 . + 0 ID=cds1560;Parent=gene1618;Dbxref=Genbank:WP_032485806.1;Name=WP_032485806.1;gbkey=CDS;product=hemolysin;protein_id=WP_032485806.1;transl_table=11 NC_008149.1 RefSeq gene 1731717 1733447 . - . ID=gene1619;Name=YPN_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08100;old_locus_tag=YPN_1523 NC_008149.1 Protein Homology CDS 1731717 1733447 . - 0 ID=cds1561;Parent=gene1619;Dbxref=Genbank:WP_002228433.1;Name=WP_002228433.1;gbkey=CDS;product=arginine--tRNA ligase;protein_id=WP_002228433.1;transl_table=11 NC_008149.1 RefSeq gene 1734058 1734633 . + . ID=gene1620;Name=YPN_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08105;old_locus_tag=YPN_1524 NC_008149.1 Protein Homology CDS 1734058 1734633 . + 0 ID=cds1562;Parent=gene1620;Dbxref=Genbank:WP_002211210.1;Name=WP_002211210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211210.1;transl_table=11 NC_008149.1 RefSeq gene 1734865 1735629 . + . ID=gene1621;Name=YPN_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08110;old_locus_tag=YPN_1525 NC_008149.1 Protein Homology CDS 1734865 1735629 . + 0 ID=cds1563;Parent=gene1621;Dbxref=Genbank:WP_002211209.1;Name=WP_002211209.1;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=WP_002211209.1;transl_table=11 NC_008149.1 RefSeq gene 1735822 1736793 . - . ID=gene1622;Name=YPN_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08115;old_locus_tag=YPN_1526 NC_008149.1 Protein Homology CDS 1735822 1736793 . - 0 ID=cds1564;Parent=gene1622;Dbxref=Genbank:WP_002211208.1;Name=WP_002211208.1;Note=catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA;gbkey=CDS;product=tRNA (mo5U34)-methyltransferase;protein_id=WP_002211208.1;transl_table=11 NC_008149.1 RefSeq gene 1736790 1737593 . - . ID=gene1623;Name=YPN_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08120;old_locus_tag=YPN_1527 NC_008149.1 Protein Homology CDS 1736790 1737593 . - 0 ID=cds1565;Parent=gene1623;Dbxref=Genbank:WP_002211207.1;Name=WP_002211207.1;gbkey=CDS;product=tRNA (cmo5U34)-methyltransferase;protein_id=WP_002211207.1;transl_table=11 NC_008149.1 RefSeq gene 1737784 1738179 . - . ID=gene1624;Name=YPN_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08125;old_locus_tag=YPN_1528 NC_008149.1 Protein Homology CDS 1737784 1738179 . - 0 ID=cds1566;Parent=gene1624;Dbxref=Genbank:WP_002211206.1;Name=WP_002211206.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211206.1;transl_table=11 NC_008149.1 RefSeq gene 1738359 1739174 . - . ID=gene1625;Name=YPN_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08130;old_locus_tag=YPN_1529 NC_008149.1 Protein Homology CDS 1738359 1739174 . - 0 ID=cds1567;Parent=gene1625;Dbxref=Genbank:WP_002211205.1;Name=WP_002211205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211205.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1739181 1739646 . + . ID=id157;gbkey=repeat_region NC_008149.1 RefSeq gene 1740232 1742028 . + . ID=gene1626;Name=YPN_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08135;old_locus_tag=YPN_1530 NC_008149.1 Protein Homology CDS 1740232 1742028 . + 0 ID=cds1568;Parent=gene1626;Dbxref=Genbank:WP_002211204.1;Name=WP_002211204.1;gbkey=CDS;product=aspartate--tRNA ligase;protein_id=WP_002211204.1;transl_table=11 NC_008149.1 RefSeq gene 1742028 1742471 . + . ID=gene1627;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=YPN_RS08140;old_locus_tag=YPN_1531 NC_008149.1 Protein Homology CDS 1742028 1742471 . + 0 ID=cds1569;Parent=gene1627;Dbxref=Genbank:WP_002211203.1;Name=WP_002211203.1;Note=catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=nudB;product=dATP pyrophosphohydrolase;protein_id=WP_002211203.1;transl_table=11 NC_008149.1 RefSeq gene 1742529 1743272 . + . ID=gene1628;Name=YPN_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08145;old_locus_tag=YPN_1532 NC_008149.1 Protein Homology CDS 1742529 1743272 . + 0 ID=cds1570;Parent=gene1628;Dbxref=Genbank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211202.1;transl_table=11 NC_008149.1 RefSeq gene 1743481 1744002 . + . ID=gene1629;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=YPN_RS08150;old_locus_tag=YPN_1533 NC_008149.1 Protein Homology CDS 1743481 1744002 . + 0 ID=cds1571;Parent=gene1629;Dbxref=Genbank:WP_002211201.1;Name=WP_002211201.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11 NC_008149.1 RefSeq gene 1744285 1744899 . + . ID=gene1630;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=YPN_RS08155;old_locus_tag=YPN_1534 NC_008149.1 Protein Homology CDS 1744285 1744899 . + 0 ID=cds1572;Parent=gene1630;Dbxref=Genbank:WP_002211199.1;Name=WP_002211199.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=WP_002211199.1;transl_table=11 NC_008149.1 RefSeq gene 1745061 1746065 . + . ID=gene1631;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=YPN_RS08160;old_locus_tag=YPN_1535 NC_008149.1 Protein Homology CDS 1745061 1746065 . + 0 ID=cds1573;Parent=gene1631;Dbxref=Genbank:WP_002211198.1;Name=WP_002211198.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11 NC_008149.1 RefSeq gene 1746120 1746905 . - . ID=gene1632;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=YPN_RS08165;old_locus_tag=YPN_1536 NC_008149.1 Protein Homology CDS 1746120 1746905 . - 0 ID=cds1574;Parent=gene1632;Dbxref=Genbank:WP_002211197.1;Name=WP_002211197.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=zinc transporter;protein_id=WP_002211197.1;transl_table=11 NC_008149.1 RefSeq gene 1746902 1747660 . - . ID=gene1633;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=YPN_RS08170;old_locus_tag=YPN_1537 NC_008149.1 Protein Homology CDS 1746902 1747660 . - 0 ID=cds1575;Parent=gene1633;Dbxref=Genbank:WP_002228434.1;Name=WP_002228434.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=WP_002228434.1;transl_table=11 NC_008149.1 RefSeq gene 1747736 1748692 . + . ID=gene1634;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=YPN_RS08175;old_locus_tag=YPN_1538 NC_008149.1 Protein Homology CDS 1747736 1748692 . + 0 ID=cds1576;Parent=gene1634;Dbxref=Genbank:WP_002227944.1;Name=WP_002227944.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=zinc uptake system protein ZnuA;protein_id=WP_002227944.1;transl_table=11 NC_008149.1 RefSeq gene 1748713 1750029 . + . ID=gene1635;Name=YPN_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08180;old_locus_tag=YPN_1539 NC_008149.1 Protein Homology CDS 1748713 1750029 . + 0 ID=cds1577;Parent=gene1635;Dbxref=Genbank:WP_002228437.1;Name=WP_002228437.1;gbkey=CDS;product=peptidase;protein_id=WP_002228437.1;transl_table=11 NC_008149.1 RefSeq gene 1750296 1751258 . + . ID=gene1636;Name=YPN_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08185;old_locus_tag=YPN_1540 NC_008149.1 Protein Homology CDS 1750296 1751258 . + 0 ID=cds1578;Parent=gene1636;Dbxref=Genbank:WP_002211194.1;Name=WP_002211194.1;gbkey=CDS;product=lipid A biosynthesis acyltransferase;protein_id=WP_002211194.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1751378 1751554 . + . ID=id158;gbkey=repeat_region NC_008149.1 RefSeq gene 1751603 1753045 . - . ID=gene1637;Name=YPN_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08190;old_locus_tag=YPN_1541 NC_008149.1 Protein Homology CDS 1751603 1753045 . - 0 ID=cds1579;Parent=gene1637;Dbxref=Genbank:WP_002211193.1;Name=WP_002211193.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002211193.1;transl_table=11 NC_008149.1 RefSeq gene 1753375 1754244 . - . ID=gene1638;Name=YPN_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08195;old_locus_tag=YPN_1542 NC_008149.1 Protein Homology CDS 1753375 1754244 . - 0 ID=cds1580;Parent=gene1638;Dbxref=Genbank:WP_002211192.1;Name=WP_002211192.1;Note=Represses the expression of the zwf%2C eda%2C glp and gap;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002211192.1;transl_table=11 NC_008149.1 RefSeq gene 1754597 1756081 . + . ID=gene1639;Name=YPN_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08200;old_locus_tag=YPN_1543 NC_008149.1 Protein Homology CDS 1754597 1756081 . + 0 ID=cds1581;Parent=gene1639;Dbxref=Genbank:WP_002211191.1;Name=WP_002211191.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=WP_002211191.1;transl_table=11 NC_008149.1 RefSeq gene 1756323 1756964 . + . ID=gene1640;Name=YPN_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08205;old_locus_tag=YPN_1544 NC_008149.1 Protein Homology CDS 1756323 1756964 . + 0 ID=cds1582;Parent=gene1640;Dbxref=Genbank:WP_002211190.1;Name=WP_002211190.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;product=ketohydroxyglutarate aldolase;protein_id=WP_002211190.1;transl_table=11 NC_008149.1 RefSeq gene 1757679 1758122 . + . ID=gene1641;Name=YPN_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08210;old_locus_tag=YPN_1545 NC_008149.1 Protein Homology CDS 1757679 1758122 . + 0 ID=cds1583;Parent=gene1641;Dbxref=Genbank:WP_002211188.1;Name=WP_002211188.1;gbkey=CDS;product=spermidine export protein MdtJ;protein_id=WP_002211188.1;transl_table=11 NC_008149.1 RefSeq gene 1758109 1758438 . + . ID=gene1642;Name=YPN_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08215;old_locus_tag=YPN_1546 NC_008149.1 Protein Homology CDS 1758109 1758438 . + 0 ID=cds1584;Parent=gene1642;Dbxref=Genbank:WP_002211187.1;Name=WP_002211187.1;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;gbkey=CDS;product=spermidine export protein MdtI;protein_id=WP_002211187.1;transl_table=11 NC_008149.1 RefSeq gene 1758570 1758914 . - . ID=gene1643;Name=YPN_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08220;old_locus_tag=YPN_1547 NC_008149.1 Protein Homology CDS 1758570 1758914 . - 0 ID=cds1585;Parent=gene1643;Dbxref=Genbank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211186.1;transl_table=11 NC_008149.1 RefSeq gene 1759045 1760949 . + . ID=gene1644;Name=YPN_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08225;old_locus_tag=YPN_1548 NC_008149.1 Protein Homology CDS 1759045 1760949 . + 0 ID=cds1586;Parent=gene1644;Dbxref=Genbank:WP_002211185.1;Name=WP_002211185.1;gbkey=CDS;product=ATP-dependent helicase;protein_id=WP_002211185.1;transl_table=11 NC_008149.1 RefSeq gene 1761021 1761719 . + . ID=gene1645;Name=YPN_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08230;old_locus_tag=YPN_1549 NC_008149.1 Protein Homology CDS 1761021 1761719 . + 0 ID=cds1587;Parent=gene1645;Dbxref=Genbank:WP_002211184.1;Name=WP_002211184.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=WP_002211184.1;transl_table=11 NC_008149.1 RefSeq gene 1761856 1762461 . + . ID=gene1646;Name=YPN_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08235;old_locus_tag=YPN_1550 NC_008149.1 Protein Homology CDS 1761856 1762461 . + 0 ID=cds1588;Parent=gene1646;Dbxref=Genbank:WP_002211183.1;Name=WP_002211183.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211183.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1762498 1762613 . + . ID=id159;gbkey=repeat_region NC_008149.1 RefSeq gene 1763104 1764792 . + . ID=gene1647;Name=YPN_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08240;old_locus_tag=YPN_1551 NC_008149.1 Protein Homology CDS 1763104 1764792 . + 0 ID=cds1589;Parent=gene1647;Dbxref=Genbank:WP_002220632.1;Name=WP_002220632.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002220632.1;transl_table=11 NC_008149.1 RefSeq gene 1764952 1766073 . + . ID=gene1648;Name=YPN_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08245;old_locus_tag=YPN_1552 NC_008149.1 Protein Homology CDS 1764952 1766073 . + 0 ID=cds1590;Parent=gene1648;Dbxref=Genbank:WP_002211181.1;Name=WP_002211181.1;gbkey=CDS;product=ribonuclease D;protein_id=WP_002211181.1;transl_table=11 NC_008149.1 RefSeq gene 1766310 1766579 . - . ID=gene1649;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=YPN_RS08250;old_locus_tag=YPN_1553 NC_008149.1 Protein Homology CDS 1766310 1766579 . - 0 ID=cds1591;Parent=gene1649;Dbxref=Genbank:WP_002211180.1;Name=WP_002211180.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=WP_002211180.1;transl_table=11 NC_008149.1 RefSeq gene 1766583 1767395 . - . ID=gene1650;Name=YPN_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08255;old_locus_tag=YPN_1554 NC_008149.1 Protein Homology CDS 1766583 1767395 . - 0 ID=cds1592;Parent=gene1650;Dbxref=Genbank:WP_002211179.1;Name=WP_002211179.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_002211179.1;transl_table=11 NC_008149.1 RefSeq gene 1767420 1768106 . - . ID=gene1651;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=YPN_RS08260;old_locus_tag=YPN_1555 NC_008149.1 Protein Homology CDS 1767420 1768106 . - 0 ID=cds1593;Parent=gene1651;Dbxref=Genbank:WP_002220631.1;Name=WP_002220631.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum site-determining protein MinC;protein_id=WP_002220631.1;transl_table=11 NC_008149.1 RefSeq gene 1768827 1769099 . + . ID=gene1652;Name=YPN_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08265;old_locus_tag=YPN_1556 NC_008149.1 Protein Homology CDS 1768827 1769099 . + 0 ID=cds1594;Parent=gene1652;Dbxref=Genbank:WP_002211743.1;Name=WP_002211743.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211743.1;transl_table=11 NC_008149.1 RefSeq gene 1769240 1770325 . + . ID=gene1653;Name=YPN_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08270;old_locus_tag=YPN_1557 NC_008149.1 Protein Homology CDS 1769240 1770325 . + 0 ID=cds1595;Parent=gene1653;Dbxref=Genbank:WP_002215627.1;Name=WP_002215627.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215627.1;transl_table=11 NC_008149.1 RefSeq gene 1770396 1771052 . + . ID=gene1654;Name=YPN_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08275;old_locus_tag=YPN_1558 NC_008149.1 Protein Homology CDS 1770396 1771052 . + 0 ID=cds1596;Parent=gene1654;Dbxref=Genbank:WP_002211740.1;Name=WP_002211740.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211740.1;transl_table=11 NC_008149.1 RefSeq gene 1771155 1771601 . + . ID=gene1655;Name=YPN_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08280;old_locus_tag=YPN_1559 NC_008149.1 Protein Homology CDS 1771155 1771601 . + 0 ID=cds1597;Parent=gene1655;Dbxref=Genbank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211739.1;transl_table=11 NC_008149.1 RefSeq gene 1771628 1772866 . - . ID=gene1656;Name=YPN_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08285;old_locus_tag=YPN_1560 NC_008149.1 Protein Homology CDS 1771628 1772866 . - 0 ID=cds1598;Parent=gene1656;Dbxref=Genbank:WP_002211738.1;Name=WP_002211738.1;gbkey=CDS;product=integrase;protein_id=WP_002211738.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1772847 1774805 . + . ID=id160;gbkey=repeat_region NC_008149.1 RefSeq gene 1772936 1773958 . + . ID=gene1657;Name=YPN_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08290;old_locus_tag=YPN_1561 NC_008149.1 Protein Homology CDS 1772936 1773958 . + 0 ID=cds1599;Parent=gene1657;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 1773958 1774737 . + . ID=gene1658;Name=YPN_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08295;old_locus_tag=YPN_1562 NC_008149.1 Protein Homology CDS 1773958 1774737 . + 0 ID=cds1600;Parent=gene1658;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 1774905 1775165 . - . ID=gene1659;Name=YPN_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08300 NC_008149.1 Protein Homology CDS 1774905 1775165 . - 0 ID=cds1601;Parent=gene1659;Dbxref=Genbank:WP_002215632.1;Name=WP_002215632.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002215632.1;transl_table=11 NC_008149.1 RefSeq gene 1775465 1776163 . - . ID=gene1660;Name=YPN_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08305;old_locus_tag=YPN_1563 NC_008149.1 Protein Homology CDS 1775465 1776163 . - 0 ID=cds1602;Parent=gene1660;Dbxref=Genbank:WP_002211737.1;Name=WP_002211737.1;gbkey=CDS;product=DNA methyltransferase;protein_id=WP_002211737.1;transl_table=11 NC_008149.1 RefSeq gene 1776190 1776636 . + . ID=gene1661;Name=YPN_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08310;old_locus_tag=YPN_1564 NC_008149.1 Protein Homology CDS 1776190 1776636 . + 0 ID=cds1603;Parent=gene1661;Dbxref=Genbank:WP_002211736.1;Name=WP_002211736.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211736.1;transl_table=11 NC_008149.1 RefSeq gene 1776710 1777315 . + . ID=gene1662;Name=YPN_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08315;old_locus_tag=YPN_1565 NC_008149.1 Protein Homology CDS 1776710 1777315 . + 0 ID=cds1604;Parent=gene1662;Dbxref=Genbank:WP_002211735.1;Name=WP_002211735.1;gbkey=CDS;product=protein ninG;protein_id=WP_002211735.1;transl_table=11 NC_008149.1 RefSeq gene 1777316 1777705 . + . ID=gene1663;Name=YPN_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08320;old_locus_tag=YPN_1566 NC_008149.1 Protein Homology CDS 1777316 1777705 . + 0 ID=cds1605;Parent=gene1663;Dbxref=Genbank:WP_002215636.1;Name=WP_002215636.1;gbkey=CDS;product=antitermination protein;protein_id=WP_002215636.1;transl_table=11 NC_008149.1 RefSeq gene 1777709 1777927 . + . ID=gene1664;Name=YPN_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08325 NC_008149.1 Protein Homology CDS 1777709 1777927 . + 0 ID=cds1606;Parent=gene1664;Dbxref=Genbank:WP_002215638.1;Name=WP_002215638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215638.1;transl_table=11 NC_008149.1 RefSeq gene 1777976 1778539 . + . ID=gene1665;Name=YPN_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08330;old_locus_tag=YPN_1567 NC_008149.1 Protein Homology CDS 1777976 1778539 . + 0 ID=cds1607;Parent=gene1665;Dbxref=Genbank:WP_002211732.1;Name=WP_002211732.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211732.1;transl_table=11 NC_008149.1 RefSeq gene 1778624 1778800 . - . ID=gene1666;Name=YPN_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08335;old_locus_tag=YPN_1568 NC_008149.1 Protein Homology CDS 1778624 1778800 . - 0 ID=cds1608;Parent=gene1666;Dbxref=Genbank:WP_002393183.1;Name=WP_002393183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002393183.1;transl_table=11 NC_008149.1 RefSeq gene 1778963 1779172 . + . ID=gene1667;Name=YPN_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08340;old_locus_tag=YPN_1569 NC_008149.1 Protein Homology CDS 1778963 1779172 . + 0 ID=cds1609;Parent=gene1667;Dbxref=Genbank:WP_002211731.1;Name=WP_002211731.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211731.1;transl_table=11 NC_008149.1 RefSeq gene 1779169 1779444 . - . ID=gene1668;Name=YPN_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08345 NC_008149.1 Protein Homology CDS 1779169 1779444 . - 0 ID=cds1610;Parent=gene1668;Dbxref=Genbank:WP_002215644.1;Name=WP_002215644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215644.1;transl_table=11 NC_008149.1 RefSeq gene 1779690 1779887 . + . ID=gene1669;Name=YPN_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08350 NC_008149.1 Protein Homology CDS 1779690 1779887 . + 0 ID=cds1611;Parent=gene1669;Dbxref=Genbank:WP_002430108.1;Name=WP_002430108.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430108.1;transl_table=11 NC_008149.1 RefSeq gene 1779918 1780430 . + . ID=gene1670;Name=YPN_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08355;old_locus_tag=YPN_1570 NC_008149.1 Protein Homology CDS 1779918 1780430 . + 0 ID=cds1612;Parent=gene1670;Dbxref=Genbank:WP_002211730.1;Name=WP_002211730.1;gbkey=CDS;product=glycoside hydrolase;protein_id=WP_002211730.1;transl_table=11 NC_008149.1 RefSeq gene 1780415 1780873 . + . ID=gene1671;Name=YPN_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08360;old_locus_tag=YPN_1571 NC_008149.1 Protein Homology CDS 1780415 1780873 . + 0 ID=cds1613;Parent=gene1671;Dbxref=Genbank:WP_002211729.1;Name=WP_002211729.1;gbkey=CDS;product=endopeptidase;protein_id=WP_002211729.1;transl_table=11 NC_008149.1 RefSeq gene 1781419 1782132 . + . ID=gene1672;Name=YPN_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08365;old_locus_tag=YPN_1572 NC_008149.1 Protein Homology CDS 1781419 1782132 . + 0 ID=cds1614;Parent=gene1672;Dbxref=Genbank:WP_002211727.1;Name=WP_002211727.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211727.1;transl_table=11 NC_008149.1 RefSeq gene 1782589 1783224 . + . ID=gene1673;Name=YPN_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08370;old_locus_tag=YPN_1573 NC_008149.1 Protein Homology CDS 1782589 1783224 . + 0 ID=cds1615;Parent=gene1673;Dbxref=Genbank:WP_002211725.1;Name=WP_002211725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211725.1;transl_table=11 NC_008149.1 RefSeq gene 1783255 1783704 . + . ID=gene1674;Name=YPN_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08375;old_locus_tag=YPN_1574 NC_008149.1 Protein Homology CDS 1783255 1783704 . + 0 ID=cds1616;Parent=gene1674;Dbxref=Genbank:WP_002211724.1;Name=WP_002211724.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211724.1;transl_table=11 NC_008149.1 RefSeq gene 1783714 1784292 . + . ID=gene1675;Name=YPN_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08380;old_locus_tag=YPN_1575 NC_008149.1 Protein Homology CDS 1783714 1784292 . + 0 ID=cds1617;Parent=gene1675;Dbxref=Genbank:WP_002215656.1;Name=WP_002215656.1;gbkey=CDS;product=terminase large subunit;protein_id=WP_002215656.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1784267 1785586 . + . ID=id161;gbkey=repeat_region NC_008149.1 RefSeq gene 1784340 1785548 . + . ID=gene1676;Name=YPN_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08385;old_locus_tag=YPN_1576 NC_008149.1 Protein Homology CDS 1784340 1785548 . + 0 ID=cds1618;Parent=gene1676;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 1785553 1786527 . + . ID=gene1677;Name=YPN_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08390;old_locus_tag=YPN_1577 NC_008149.1 Protein Homology CDS 1785553 1786527 . + 0 ID=cds1619;Parent=gene1677;Dbxref=Genbank:WP_002211722.1;Name=WP_002211722.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211722.1;transl_table=11 NC_008149.1 RefSeq gene 1786527 1787255 . + . ID=gene1678;Name=YPN_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08395;old_locus_tag=YPN_1578 NC_008149.1 Protein Homology CDS 1786527 1787255 . + 0 ID=cds1620;Parent=gene1678;Dbxref=Genbank:WP_002228445.1;Name=WP_002228445.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228445.1;transl_table=11 NC_008149.1 RefSeq gene 1787274 1787915 . + . ID=gene1679;Name=YPN_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08400;old_locus_tag=YPN_1579 NC_008149.1 Protein Homology CDS 1787274 1787915 . + 0 ID=cds1621;Parent=gene1679;Dbxref=Genbank:WP_002228446.1;Name=WP_002228446.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228446.1;transl_table=11 NC_008149.1 RefSeq gene 1787916 1789028 . + . ID=gene1680;Name=YPN_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08405;old_locus_tag=YPN_1580 NC_008149.1 Protein Homology CDS 1787916 1789028 . + 0 ID=cds1622;Parent=gene1680;Dbxref=Genbank:WP_002211721.1;Name=WP_002211721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211721.1;transl_table=11 NC_008149.1 RefSeq gene 1789150 1789923 . + . ID=gene1681;Name=YPN_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08410;old_locus_tag=YPN_1581 NC_008149.1 Protein Homology CDS 1789150 1789923 . + 0 ID=cds1623;Parent=gene1681;Dbxref=Genbank:WP_002211720.1;Name=WP_002211720.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211720.1;transl_table=11 NC_008149.1 RefSeq gene 1789937 1791142 . + . ID=gene1682;Name=YPN_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08415;old_locus_tag=YPN_1582 NC_008149.1 Protein Homology CDS 1789937 1791142 . + 0 ID=cds1624;Parent=gene1682;Dbxref=Genbank:WP_002211719.1;Name=WP_002211719.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211719.1;transl_table=11 NC_008149.1 RefSeq gene 1791190 1791672 . + . ID=gene1683;Name=YPN_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08420;old_locus_tag=YPN_1583 NC_008149.1 Protein Homology CDS 1791190 1791672 . + 0 ID=cds1625;Parent=gene1683;Dbxref=Genbank:WP_002211718.1;Name=WP_002211718.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211718.1;transl_table=11 NC_008149.1 RefSeq gene 1791669 1791923 . + . ID=gene1684;Name=YPN_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08425;old_locus_tag=YPN_1584 NC_008149.1 Protein Homology CDS 1791669 1791923 . + 0 ID=cds1626;Parent=gene1684;Dbxref=Genbank:WP_002211717.1;Name=WP_002211717.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211717.1;transl_table=11 NC_008149.1 RefSeq gene 1791925 1792275 . + . ID=gene1685;Name=YPN_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08430;old_locus_tag=YPN_1585 NC_008149.1 Protein Homology CDS 1791925 1792275 . + 0 ID=cds1627;Parent=gene1685;Dbxref=Genbank:WP_002211716.1;Name=WP_002211716.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211716.1;transl_table=11 NC_008149.1 RefSeq gene 1792277 1792861 . + . ID=gene1686;Name=YPN_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08435;old_locus_tag=YPN_1586 NC_008149.1 Protein Homology CDS 1792277 1792861 . + 0 ID=cds1628;Parent=gene1686;Dbxref=Genbank:WP_002211715.1;Name=WP_002211715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211715.1;transl_table=11 NC_008149.1 RefSeq gene 1792858 1793265 . + . ID=gene1687;Name=YPN_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08440;old_locus_tag=YPN_1587 NC_008149.1 Protein Homology CDS 1792858 1793265 . + 0 ID=cds1629;Parent=gene1687;Dbxref=Genbank:WP_002211714.1;Name=WP_002211714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211714.1;transl_table=11 NC_008149.1 RefSeq gene 1793331 1794251 . + . ID=gene1688;Name=YPN_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08445;old_locus_tag=YPN_1588 NC_008149.1 Protein Homology CDS 1793331 1794251 . + 0 ID=cds1630;Parent=gene1688;Dbxref=Genbank:WP_002211713.1;Name=WP_002211713.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211713.1;transl_table=11 NC_008149.1 RefSeq gene 1794264 1794575 . + . ID=gene1689;Name=YPN_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08450;old_locus_tag=YPN_1589 NC_008149.1 Protein Homology CDS 1794264 1794575 . + 0 ID=cds1631;Parent=gene1689;Dbxref=Genbank:WP_002211712.1;Name=WP_002211712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211712.1;transl_table=11 NC_008149.1 RefSeq gene 1794662 1794883 . + . ID=gene1690;Name=YPN_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08455 NC_008149.1 Protein Homology CDS 1794662 1794883 . + 0 ID=cds1632;Parent=gene1690;Dbxref=Genbank:WP_002214476.1;Name=WP_002214476.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214476.1;transl_table=11 NC_008149.1 RefSeq gene 1794884 1798387 . + . ID=gene1691;Name=YPN_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08460;old_locus_tag=YPN_1590 NC_008149.1 Protein Homology CDS 1794884 1798387 . + 0 ID=cds1633;Parent=gene1691;Dbxref=Genbank:WP_002211711.1;Name=WP_002211711.1;gbkey=CDS;product=tail protein;protein_id=WP_002211711.1;transl_table=11 NC_008149.1 RefSeq gene 1798390 1798731 . + . ID=gene1692;Name=YPN_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08465;old_locus_tag=YPN_1591 NC_008149.1 Protein Homology CDS 1798390 1798731 . + 0 ID=cds1634;Parent=gene1692;Dbxref=Genbank:WP_002211710.1;Name=WP_002211710.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211710.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1798886 1799609 . + . ID=id162;gbkey=repeat_region NC_008149.1 RefSeq gene 1798892 1799047 . + . ID=gene1693;Name=YPN_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08470 NC_008149.1 Protein Homology CDS 1798892 1799047 . + 0 ID=cds1635;Parent=gene1693;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 1799037 1799495 . + . ID=gene1694;Name=YPN_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08475;old_locus_tag=YPN_1592 NC_008149.1 Protein Homology CDS 1799037 1799495 . + 0 ID=cds1636;Parent=gene1694;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 1799616 1800368 . + . ID=gene1695;Name=YPN_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08480;old_locus_tag=YPN_1593 NC_008149.1 Protein Homology CDS 1799616 1800368 . + 0 ID=cds1637;Parent=gene1695;Dbxref=Genbank:WP_002211709.1;Name=WP_002211709.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211709.1;transl_table=11 NC_008149.1 RefSeq gene 1800371 1801081 . + . ID=gene1696;Name=YPN_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08485;old_locus_tag=YPN_1594 NC_008149.1 Protein Homology CDS 1800371 1801081 . + 0 ID=cds1638;Parent=gene1696;Dbxref=Genbank:WP_002211708.1;Name=WP_002211708.1;gbkey=CDS;product=peptidase P60;protein_id=WP_002211708.1;transl_table=11 NC_008149.1 RefSeq gene 1801342 1801974 . + . ID=gene1697;Name=YPN_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08490;old_locus_tag=YPN_1595 NC_008149.1 Protein Homology CDS 1801342 1801974 . + 0 ID=cds1639;Parent=gene1697;Dbxref=Genbank:WP_002211707.1;Name=WP_002211707.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211707.1;transl_table=11 NC_008149.1 RefSeq gene 1802053 1802484 . - . ID=gene1698;Name=YPN_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08495;old_locus_tag=YPN_1596 NC_008149.1 Protein Homology CDS 1802053 1802484 . - 0 ID=cds1640;Parent=gene1698;Dbxref=Genbank:WP_002211706.1;Name=WP_002211706.1;gbkey=CDS;product=Rha family transcriptional regulator;protein_id=WP_002211706.1;transl_table=11 NC_008149.1 RefSeq gene 1802608 1802775 . + . ID=gene1699;Name=YPN_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08500 NC_008149.1 Protein Homology CDS 1802608 1802775 . + 0 ID=cds1641;Parent=gene1699;Dbxref=Genbank:WP_002211705.1;Name=WP_002211705.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211705.1;transl_table=11 NC_008149.1 RefSeq gene 1802849 1803856 . + . ID=gene1700;Name=YPN_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08505;old_locus_tag=YPN_1597 NC_008149.1 Protein Homology CDS 1802849 1803856 . + 0 ID=cds1642;Parent=gene1700;Dbxref=Genbank:WP_002211704.1;Name=WP_002211704.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211704.1;transl_table=11 NC_008149.1 RefSeq gene 1803955 1804506 . + . ID=gene1701;Name=YPN_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08510;old_locus_tag=YPN_1598 NC_008149.1 Protein Homology CDS 1803955 1804506 . + 0 ID=cds1643;Parent=gene1701;Dbxref=Genbank:WP_002214482.1;Name=WP_002214482.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214482.1;transl_table=11 NC_008149.1 RefSeq gene 1804649 1804864 . + . ID=gene1702;Name=YPN_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08515 NC_008149.1 Protein Homology CDS 1804649 1804864 . + 0 ID=cds1644;Parent=gene1702;Dbxref=Genbank:WP_002211701.1;Name=WP_002211701.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211701.1;transl_table=11 NC_008149.1 RefSeq gene 1804920 1805540 . + . ID=gene1703;Name=YPN_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08520;old_locus_tag=YPN_1599 NC_008149.1 Protein Homology CDS 1804920 1805540 . + 0 ID=cds1645;Parent=gene1703;Dbxref=Genbank:WP_002211700.1;Name=WP_002211700.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211700.1;transl_table=11 NC_008149.1 RefSeq gene 1805582 1805746 . + . ID=gene1704;Name=YPN_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08525 NC_008149.1 Protein Homology CDS 1805582 1805746 . + 0 ID=cds1646;Parent=gene1704;Dbxref=Genbank:WP_002211699.1;Name=WP_002211699.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211699.1;transl_table=11 NC_008149.1 RefSeq gene 1805715 1805936 . - . ID=gene1705;Name=YPN_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08530 NC_008149.1 Protein Homology CDS 1805715 1805936 . - 0 ID=cds1647;Parent=gene1705;Dbxref=Genbank:WP_002359202.1;Name=WP_002359202.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002359202.1;transl_table=11 NC_008149.1 RefSeq gene 1806112 1809315 . + . ID=gene1706;Name=YPN_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08535;old_locus_tag=YPN_1600 NC_008149.1 Protein Homology CDS 1806112 1809315 . + 0 ID=cds1648;Parent=gene1706;Dbxref=Genbank:WP_002211698.1;Name=WP_002211698.1;gbkey=CDS;product=host specificity protein;protein_id=WP_002211698.1;transl_table=11 NC_008149.1 RefSeq gene 1809315 1810313 . + . ID=gene1707;Name=YPN_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08540;old_locus_tag=YPN_1601 NC_008149.1 Protein Homology CDS 1809315 1810313 . + 0 ID=cds1649;Parent=gene1707;Dbxref=Genbank:WP_002211697.1;Name=WP_002211697.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211697.1;transl_table=11 NC_008149.1 RefSeq gene 1810330 1811247 . + . ID=gene1708;Name=YPN_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08545;old_locus_tag=YPN_1602 NC_008149.1 Protein Homology CDS 1810330 1811247 . + 0 ID=cds1650;Parent=gene1708;Dbxref=Genbank:WP_002211696.1;Name=WP_002211696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211696.1;transl_table=11 NC_008149.1 RefSeq gene 1811258 1811677 . + . ID=gene1709;Name=YPN_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08550;old_locus_tag=YPN_1603 NC_008149.1 Protein Homology CDS 1811258 1811677 . + 0 ID=cds1651;Parent=gene1709;Dbxref=Genbank:WP_002211695.1;Name=WP_002211695.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_002211695.1;transl_table=11 NC_008149.1 RefSeq gene 1811674 1811829 . + . ID=gene1710;Name=YPN_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08555;old_locus_tag=YPN_1604 NC_008149.1 Protein Homology CDS 1811674 1811829 . + 0 ID=cds1652;Parent=gene1710;Dbxref=Genbank:WP_002211694.1;Name=WP_002211694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211694.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1811860 1813181 . + . ID=id163;gbkey=repeat_region NC_008149.1 RefSeq gene 1811898 1813106 . - . ID=gene1711;Name=YPN_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08560;old_locus_tag=YPN_1605 NC_008149.1 Protein Homology CDS 1811898 1813106 . - 0 ID=cds1653;Parent=gene1711;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 1813411 1814583 . - . ID=gene1712;Name=YPN_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08565;old_locus_tag=YPN_1606 NC_008149.1 Protein Homology CDS 1813411 1814583 . - 0 ID=cds1654;Parent=gene1712;Dbxref=Genbank:WP_002214492.1;Name=WP_002214492.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002214492.1;transl_table=11 NC_008149.1 RefSeq gene 1814587 1815786 . - . ID=gene1713;Name=YPN_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08570;old_locus_tag=YPN_1607 NC_008149.1 Protein Homology CDS 1814587 1815786 . - 0 ID=cds1655;Parent=gene1713;Dbxref=Genbank:WP_002211693.1;Name=WP_002211693.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;product=aminotransferase;protein_id=WP_002211693.1;transl_table=11 NC_008149.1 RefSeq gene 1815803 1816543 . - . ID=gene1714;Name=YPN_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08575;old_locus_tag=YPN_1608 NC_008149.1 Protein Homology CDS 1815803 1816543 . - 0 ID=cds1656;Parent=gene1714;Dbxref=Genbank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11 NC_008149.1 RefSeq gene 1817635 1817991 . + . ID=gene1715;Name=YPN_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08580;old_locus_tag=YPN_1609 NC_008149.1 Protein Homology CDS 1817635 1817991 . + 0 ID=cds1657;Parent=gene1715;Dbxref=Genbank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11 NC_008149.1 RefSeq gene 1818408 1818938 . - . ID=gene1716;Name=YPN_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08585;old_locus_tag=YPN_1610 NC_008149.1 Protein Homology CDS 1818408 1818938 . - 0 ID=cds1658;Parent=gene1716;Dbxref=Genbank:WP_002227934.1;Name=WP_002227934.1;gbkey=CDS;product=disulfide bond formation protein B;protein_id=WP_002227934.1;transl_table=11 NC_008149.1 RefSeq gene 1819174 1820748 . - . ID=gene1717;Name=YPN_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08590;old_locus_tag=YPN_1611 NC_008149.1 Protein Homology CDS 1819174 1820748 . - 0 ID=cds1659;Parent=gene1717;Dbxref=Genbank:WP_002211689.1;Name=WP_002211689.1;gbkey=CDS;product=Na+/H+ antiporter NhaB;protein_id=WP_002211689.1;transl_table=11 NC_008149.1 RefSeq gene 1820992 1821711 . + . ID=gene1718;Name=YPN_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08595;old_locus_tag=YPN_1612 NC_008149.1 Protein Homology CDS 1820992 1821711 . + 0 ID=cds1660;Parent=gene1718;Dbxref=Genbank:WP_002211688.1;Name=WP_002211688.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;product=fatty acid metabolism regulator protein;protein_id=WP_002211688.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1821750 1821882 . + . ID=id164;gbkey=repeat_region NC_008149.1 RefSeq gene 1821929 1823464 . - . ID=gene1719;Name=YPN_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08600;old_locus_tag=YPN_1613 NC_008149.1 Protein Homology CDS 1821929 1823464 . - 0 ID=cds1661;Parent=gene1719;Dbxref=Genbank:WP_002211687.1;Name=WP_002211687.1;gbkey=CDS;product=SpoVR family protein;protein_id=WP_002211687.1;transl_table=11 NC_008149.1 RefSeq gene 1823930 1825234 . + . ID=gene1720;Name=YPN_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08605;old_locus_tag=YPN_1614 NC_008149.1 Protein Homology CDS 1823930 1825234 . + 0 ID=cds1662;Parent=gene1720;Dbxref=Genbank:WP_002211686.1;Name=WP_002211686.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;product=D-amino acid dehydrogenase;protein_id=WP_002211686.1;transl_table=11 NC_008149.1 RefSeq gene 1825250 1826452 . - . ID=gene1721;Name=YPN_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08610;old_locus_tag=YPN_1615 NC_008149.1 Protein Homology CDS 1825250 1826452 . - 0 ID=cds1663;Parent=gene1721;Dbxref=Genbank:WP_002216508.1;Name=WP_002216508.1;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002216508.1;transl_table=11 NC_008149.1 RefSeq gene 1826717 1827586 . - . ID=gene1722;Name=YPN_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08615;old_locus_tag=YPN_1616 NC_008149.1 Protein Homology CDS 1826717 1827586 . - 0 ID=cds1664;Parent=gene1722;Dbxref=Genbank:WP_002211685.1;Name=WP_002211685.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002211685.1;transl_table=11 NC_008149.1 RefSeq gene 1827784 1828689 . + . ID=gene1723;Name=YPN_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08620;old_locus_tag=YPN_1617 NC_008149.1 Protein Homology CDS 1827784 1828689 . + 0 ID=cds1665;Parent=gene1723;Dbxref=Genbank:WP_002211684.1;Name=WP_002211684.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211684.1;transl_table=11 NC_008149.1 RefSeq gene 1828724 1829842 . - . ID=gene1724;Name=YPN_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08625;old_locus_tag=YPN_1618 NC_008149.1 Protein Homology CDS 1828724 1829842 . - 0 ID=cds1666;Parent=gene1724;Dbxref=Genbank:WP_002211683.1;Name=WP_002211683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211683.1;transl_table=11 NC_008149.1 RefSeq gene 1829950 1831224 . - . ID=gene1725;Name=YPN_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08630;old_locus_tag=YPN_1619 NC_008149.1 Protein Homology CDS 1829950 1831224 . - 0 ID=cds1667;Parent=gene1725;Dbxref=Genbank:WP_002216501.1;Name=WP_002216501.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216501.1;transl_table=11 NC_008149.1 RefSeq gene 1831374 1833308 . - . ID=gene1726;Name=YPN_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08635;old_locus_tag=YPN_1620 NC_008149.1 Protein Homology CDS 1831374 1833308 . - 0 ID=cds1668;Parent=gene1726;Dbxref=Genbank:WP_002211681.1;Name=WP_002211681.1;gbkey=CDS;product=PrkA family serine protein kinase;protein_id=WP_002211681.1;transl_table=11 NC_008149.1 RefSeq gene 1833731 1834501 . + . ID=gene1727;Name=YPN_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08640;old_locus_tag=YPN_1621 NC_008149.1 Protein Homology CDS 1833731 1834501 . + 0 ID=cds1669;Parent=gene1727;Dbxref=Genbank:WP_002211680.1;Name=WP_002211680.1;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA;gbkey=CDS;product=MltA-interacting protein MipA;protein_id=WP_002211680.1;transl_table=11 NC_008149.1 RefSeq gene 1834574 1835449 . - . ID=gene1728;Name=YPN_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08645;old_locus_tag=YPN_1622 NC_008149.1 Protein Homology CDS 1834574 1835449 . - 0 ID=cds1670;Parent=gene1728;Dbxref=Genbank:WP_002211679.1;Name=WP_002211679.1;gbkey=CDS;product=glucose-6-phosphate 1-epimerase;protein_id=WP_002211679.1;transl_table=11 NC_008149.1 RefSeq gene 1835763 1836758 . - . ID=gene1729;Name=YPN_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08650;old_locus_tag=YPN_1623 NC_008149.1 Protein Homology CDS 1835763 1836758 . - 0 ID=cds1671;Parent=gene1729;Dbxref=Genbank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11 NC_008149.1 RefSeq gene 1837106 1837519 . + . ID=gene1730;Name=YPN_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08655;old_locus_tag=YPN_1624 NC_008149.1 Protein Homology CDS 1837106 1837519 . + 0 ID=cds1672;Parent=gene1730;Dbxref=Genbank:WP_002211677.1;Name=WP_002211677.1;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11 NC_008149.1 RefSeq gene 1837590 1837862 . + . ID=gene1731;Name=YPN_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08660;old_locus_tag=YPN_1625 NC_008149.1 Protein Homology CDS 1837590 1837862 . + 0 ID=cds1673;Parent=gene1731;Dbxref=Genbank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217933.1;transl_table=11 NC_008149.1 RefSeq gene 1837996 1838643 . - . ID=gene1732;Name=YPN_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08665;old_locus_tag=YPN_1626 NC_008149.1 Protein Homology CDS 1837996 1838643 . - 0 ID=cds1674;Parent=gene1732;Dbxref=Genbank:WP_002211676.1;Name=WP_002211676.1;gbkey=CDS;product=nicotinamidase/pyrazinamidase;protein_id=WP_002211676.1;transl_table=11 NC_008149.1 RefSeq gene 1838658 1839674 . - . ID=gene1733;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=YPN_RS08670;old_locus_tag=YPN_1627 NC_008149.1 Protein Homology CDS 1838658 1839674 . - 0 ID=cds1675;Parent=gene1733;Dbxref=Genbank:WP_002211675.1;Name=WP_002211675.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=WP_002211675.1;transl_table=11 NC_008149.1 RefSeq gene 1839791 1841641 . - . ID=gene1734;Name=YPN_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08675;old_locus_tag=YPN_1628 NC_008149.1 Protein Homology CDS 1839791 1841641 . - 0 ID=cds1676;Parent=gene1734;Dbxref=Genbank:WP_002211674.1;Name=WP_002211674.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;product=signal peptide peptidase SppA;protein_id=WP_002211674.1;transl_table=11 NC_008149.1 RefSeq gene 1841804 1842355 . + . ID=gene1735;Name=YPN_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08680;old_locus_tag=YPN_1629 NC_008149.1 Protein Homology CDS 1841804 1842355 . + 0 ID=cds1677;Parent=gene1735;Dbxref=Genbank:WP_002211673.1;Name=WP_002211673.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211673.1;transl_table=11 NC_008149.1 RefSeq gene 1842580 1843626 . + . ID=gene1736;Name=YPN_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08685;old_locus_tag=YPN_1630 NC_008149.1 Protein Homology CDS 1842580 1843626 . + 0 ID=cds1678;Parent=gene1736;Dbxref=Genbank:WP_002211671.1;Name=WP_002211671.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;product=selenophosphate synthase;protein_id=WP_002211671.1;transl_table=11 NC_008149.1 RefSeq gene 1843688 1845613 . + . ID=gene1737;Name=YPN_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08690;old_locus_tag=YPN_1631 NC_008149.1 Protein Homology CDS 1843688 1845613 . + 0 ID=cds1679;Parent=gene1737;Dbxref=Genbank:WP_002211670.1;Name=WP_002211670.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;product=DNA topoisomerase III;protein_id=WP_002211670.1;transl_table=11 NC_008149.1 RefSeq gene 1845610 1845900 . + . ID=gene1738;Name=YPN_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08695;old_locus_tag=YPN_1632 NC_008149.1 Protein Homology CDS 1845610 1845900 . + 0 ID=cds1680;Parent=gene1738;Dbxref=Genbank:WP_002211669.1;Name=WP_002211669.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211669.1;transl_table=11 NC_008149.1 RefSeq gene 1845913 1846299 . - . ID=gene1739;Name=YPN_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08700;old_locus_tag=YPN_1633 NC_008149.1 Protein Homology CDS 1845913 1846299 . - 0 ID=cds1681;Parent=gene1739;Dbxref=Genbank:WP_002211668.1;Name=WP_002211668.1;gbkey=CDS;product=pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002211668.1;transl_table=11 NC_008149.1 RefSeq gene 1846397 1847203 . - . ID=gene1740;Name=YPN_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08705;old_locus_tag=YPN_1634 NC_008149.1 Protein Homology CDS 1846397 1847203 . - 0 ID=cds1682;Parent=gene1740;Dbxref=Genbank:WP_002211667.1;Name=WP_002211667.1;gbkey=CDS;product=exonuclease III;protein_id=WP_002211667.1;transl_table=11 NC_008149.1 RefSeq gene 1848013 1848873 . + . ID=gene1741;Name=YPN_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08710;old_locus_tag=YPN_1635 NC_008149.1 Protein Homology CDS 1848013 1848873 . + 0 ID=cds1683;Parent=gene1741;Dbxref=Genbank:WP_002211665.1;Name=WP_002211665.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211665.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1848935 1849399 . + . ID=id165;gbkey=repeat_region NC_008149.1 RefSeq gene 1849381 1849465 . - . ID=gene1742;Name=YPN_RS08715;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS08715;old_locus_tag=YPN_r063 NC_008149.1 tRNAscan-SE tRNA 1849381 1849465 . - . ID=rna56;Parent=gene1742;anticodon=(pos:complement(1849429..1849431));gbkey=tRNA;product=tRNA-Tyr NC_008149.1 tRNAscan-SE exon 1849381 1849465 . - . ID=id166;Parent=rna56;anticodon=(pos:complement(1849429..1849431));gbkey=tRNA;product=tRNA-Tyr NC_008149.1 RefSeq repeat_region 1849671 1850991 . + . ID=id167;gbkey=repeat_region NC_008149.1 RefSeq gene 1849745 1850953 . + . ID=gene1743;Name=YPN_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08720;old_locus_tag=YPN_1637 NC_008149.1 Protein Homology CDS 1849745 1850953 . + 0 ID=cds1684;Parent=gene1743;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 1850916 1851785 . - . ID=gene1744;Name=YPN_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08725;old_locus_tag=YPN_1638 NC_008149.1 Protein Homology CDS 1850916 1851785 . - 0 ID=cds1685;Parent=gene1744;Dbxref=Genbank:WP_002210667.1;Name=WP_002210667.1;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=WP_002210667.1;transl_table=11 NC_008149.1 RefSeq gene 1851869 1852333 . - . ID=gene1745;Name=YPN_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08730;old_locus_tag=YPN_1639 NC_008149.1 Protein Homology CDS 1851869 1852333 . - 0 ID=cds1686;Parent=gene1745;Dbxref=Genbank:WP_002210666.1;Name=WP_002210666.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210666.1;transl_table=11 NC_008149.1 RefSeq gene 1853667 1854683 . + . ID=gene1746;Name=YPN_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08735;old_locus_tag=YPN_1640 NC_008149.1 Protein Homology CDS 1853667 1854683 . + 0 ID=cds1687;Parent=gene1746;Dbxref=Genbank:WP_002210665.1;Name=WP_002210665.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210665.1;transl_table=11 NC_008149.1 RefSeq gene 1854990 1856336 . + . ID=gene1747;Name=YPN_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08740;old_locus_tag=YPN_1641 NC_008149.1 Protein Homology CDS 1854990 1856336 . + 0 ID=cds1688;Parent=gene1747;Dbxref=Genbank:WP_002210664.1;Name=WP_002210664.1;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=WP_002210664.1;transl_table=11 NC_008149.1 RefSeq gene 1856771 1857178 . - . ID=gene1748;Name=YPN_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08745;old_locus_tag=YPN_1642 NC_008149.1 Protein Homology CDS 1856771 1857178 . - 0 ID=cds1689;Parent=gene1748;Dbxref=Genbank:WP_002223593.1;Name=WP_002223593.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002223593.1;transl_table=11 NC_008149.1 RefSeq gene 1857928 1858518 . + . ID=gene1749;Name=YPN_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08750;old_locus_tag=YPN_1643 NC_008149.1 Protein Homology CDS 1857928 1858518 . + 0 ID=cds1690;Parent=gene1749;Dbxref=Genbank:WP_002210659.1;Name=WP_002210659.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1858819 1860776 . + . ID=id168;gbkey=repeat_region NC_008149.1 RefSeq gene 1858887 1859666 . - . ID=gene1750;Name=YPN_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08755;old_locus_tag=YPN_1644 NC_008149.1 Protein Homology CDS 1858887 1859666 . - 0 ID=cds1691;Parent=gene1750;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 1859666 1860688 . - . ID=gene1751;Name=YPN_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08760;old_locus_tag=YPN_1645 NC_008149.1 Protein Homology CDS 1859666 1860688 . - 0 ID=cds1692;Parent=gene1751;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 1861228 1863903 . - . ID=gene1752;Name=YPN_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08765;old_locus_tag=YPN_1646 NC_008149.1 Protein Homology CDS 1861228 1863903 . - 0 ID=cds1693;Parent=gene1752;Dbxref=Genbank:WP_002223614.1;Name=WP_002223614.1;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=WP_002223614.1;transl_table=11 NC_008149.1 RefSeq gene 1864710 1865354 . + . ID=gene1753;Name=YPN_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08770;old_locus_tag=YPN_1647 NC_008149.1 Protein Homology CDS 1864710 1865354 . + 0 ID=cds1694;Parent=gene1753;Dbxref=Genbank:WP_002210656.1;Name=WP_002210656.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210656.1;transl_table=11 NC_008149.1 RefSeq gene 1866192 1867829 . + . ID=gene1754;Name=YPN_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08775;old_locus_tag=YPN_1648 NC_008149.1 Protein Homology CDS 1866192 1867829 . + 0 ID=cds1695;Parent=gene1754;Dbxref=Genbank:WP_002218177.1;Name=WP_002218177.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002218177.1;transl_table=11 NC_008149.1 RefSeq gene 1867916 1868836 . + . ID=gene1755;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=YPN_RS08780;old_locus_tag=YPN_1649 NC_008149.1 Protein Homology CDS 1867916 1868836 . + 0 ID=cds1696;Parent=gene1755;Dbxref=Genbank:WP_002210654.1;Name=WP_002210654.1;gbkey=CDS;gene=oppB;product=peptide ABC transporter permease;protein_id=WP_002210654.1;transl_table=11 NC_008149.1 RefSeq gene 1868852 1869760 . + . ID=gene1756;Name=YPN_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08785;old_locus_tag=YPN_1650 NC_008149.1 Protein Homology CDS 1868852 1869760 . + 0 ID=cds1697;Parent=gene1756;Dbxref=Genbank:WP_025470761.1;Name=WP_025470761.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_025470761.1;transl_table=11 NC_008149.1 RefSeq gene 1869772 1870773 . + . ID=gene1757;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=YPN_RS08790;old_locus_tag=YPN_1651 NC_008149.1 Protein Homology CDS 1869772 1870773 . + 0 ID=cds1698;Parent=gene1757;Dbxref=Genbank:WP_002210652.1;Name=WP_002210652.1;gbkey=CDS;gene=oppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210652.1;transl_table=11 NC_008149.1 RefSeq gene 1870770 1871771 . + . ID=gene1758;Name=YPN_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08795;old_locus_tag=YPN_1652 NC_008149.1 Protein Homology CDS 1870770 1871771 . + 0 ID=cds1699;Parent=gene1758;Dbxref=Genbank:WP_002210651.1;Name=WP_002210651.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210651.1;transl_table=11 NC_008149.1 RefSeq gene 1871820 1872035 . - . ID=gene1759;Name=YPN_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08800 NC_008149.1 GeneMarkS+ CDS 1871820 1872035 . - 0 ID=cds1700;Parent=gene1759;Dbxref=Genbank:WP_015683825.1;Name=WP_015683825.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683825.1;transl_table=11 NC_008149.1 RefSeq gene 1872332 1872547 . + . ID=gene1760;Name=YPN_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08805;old_locus_tag=YPN_1653 NC_008149.1 Protein Homology CDS 1872332 1872547 . + 0 ID=cds1701;Parent=gene1760;Dbxref=Genbank:WP_002210650.1;Name=WP_002210650.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210650.1;transl_table=11 NC_008149.1 RefSeq gene 1872846 1873169 . - . ID=gene1761;Name=YPN_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08810;old_locus_tag=YPN_1654 NC_008149.1 Protein Homology CDS 1872846 1873169 . - 0 ID=cds1702;Parent=gene1761;Dbxref=Genbank:WP_002210649.1;Name=WP_002210649.1;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11 NC_008149.1 RefSeq gene 1873334 1874794 . - . ID=gene1762;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=YPN_RS08815;old_locus_tag=YPN_1655 NC_008149.1 Protein Homology CDS 1873334 1874794 . - 0 ID=cds1703;Parent=gene1762;Dbxref=Genbank:WP_002210648.1;Name=WP_002210648.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthase;protein_id=WP_002210648.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1874929 1875103 . + . ID=id169;gbkey=repeat_region NC_008149.1 RefSeq gene 1875841 1876380 . + . ID=gene1763;Name=YPN_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08820;old_locus_tag=YPN_1656 NC_008149.1 Protein Homology CDS 1875841 1876380 . + 0 ID=cds1704;Parent=gene1763;Dbxref=Genbank:WP_002210646.1;Name=WP_002210646.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002210646.1;transl_table=11 NC_008149.1 RefSeq gene 1876601 1876864 . + . ID=gene1764;Name=YPN_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08825;old_locus_tag=YPN_1658 NC_008149.1 Protein Homology CDS 1876601 1876864 . + 0 ID=cds1705;Parent=gene1764;Dbxref=Genbank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11 NC_008149.1 RefSeq gene 1876980 1877225 . - . ID=gene1765;Name=YPN_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08830;old_locus_tag=YPN_1659 NC_008149.1 Protein Homology CDS 1876980 1877225 . - 0 ID=cds1706;Parent=gene1765;Dbxref=Genbank:WP_002217646.1;Name=WP_002217646.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217646.1;transl_table=11 NC_008149.1 RefSeq gene 1877448 1877744 . - . ID=gene1766;Name=YPN_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08835;old_locus_tag=YPN_1660 NC_008149.1 Protein Homology CDS 1877448 1877744 . - 0 ID=cds1707;Parent=gene1766;Dbxref=Genbank:WP_002210643.1;Name=WP_002210643.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210643.1;transl_table=11 NC_008149.1 RefSeq gene 1878045 1878803 . + . ID=gene1767;Name=YPN_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08840;old_locus_tag=YPN_1661 NC_008149.1 Protein Homology CDS 1878045 1878803 . + 0 ID=cds1708;Parent=gene1767;Dbxref=Genbank:WP_002210642.1;Name=WP_002210642.1;gbkey=CDS;product=transporter TonB;protein_id=WP_002210642.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1878802 1880121 . + . ID=id170;gbkey=repeat_region NC_008149.1 RefSeq gene 1878839 1880047 . - . ID=gene1768;Name=YPN_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08845;old_locus_tag=YPN_1662 NC_008149.1 Protein Homology CDS 1878839 1880047 . - 0 ID=cds1709;Parent=gene1768;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 1880195 1880644 . - . ID=gene1769;Name=YPN_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08850;old_locus_tag=YPN_1663 NC_008149.1 Protein Homology CDS 1880195 1880644 . - 0 ID=cds1710;Parent=gene1769;Dbxref=Genbank:WP_002210641.1;Name=WP_002210641.1;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210641.1;transl_table=11 NC_008149.1 RefSeq gene 1880724 1881266 . - . ID=gene1770;Name=YPN_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08855;old_locus_tag=YPN_1664 NC_008149.1 Protein Homology CDS 1880724 1881266 . - 0 ID=cds1711;Parent=gene1770;Dbxref=Genbank:WP_002210640.1;Name=WP_002210640.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;product=intracellular septation protein A;protein_id=WP_002210640.1;transl_table=11 NC_008149.1 RefSeq gene 1881497 1882579 . + . ID=gene1771;Name=YPN_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08860;old_locus_tag=YPN_1665 NC_008149.1 Protein Homology CDS 1881497 1882579 . + 0 ID=cds1712;Parent=gene1771;Dbxref=Genbank:WP_002215978.1;Name=WP_002215978.1;gbkey=CDS;product=sulfate transporter;protein_id=WP_002215978.1;transl_table=11 NC_008149.1 RefSeq gene 1882611 1883231 . + . ID=gene1772;Name=YPN_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08865;old_locus_tag=YPN_1666 NC_008149.1 Protein Homology CDS 1882611 1883231 . + 0 ID=cds1713;Parent=gene1772;Dbxref=Genbank:WP_002215979.1;Name=WP_002215979.1;gbkey=CDS;product=sulfate permease;protein_id=WP_002215979.1;transl_table=11 NC_008149.1 RefSeq gene 1883352 1884122 . - . ID=gene1773;Name=YPN_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08870;old_locus_tag=YPN_1667 NC_008149.1 Protein Homology CDS 1883352 1884122 . - 0 ID=cds1714;Parent=gene1773;Dbxref=Genbank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210639.1;transl_table=11 NC_008149.1 RefSeq gene 1884284 1884499 . + . ID=gene1774;Name=YPN_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08875;old_locus_tag=YPN_1668 NC_008149.1 Protein Homology CDS 1884284 1884499 . + 0 ID=cds1715;Parent=gene1774;Dbxref=Genbank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11 NC_008149.1 RefSeq gene 1884596 1885243 . + . ID=gene1775;Name=YPN_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08880;old_locus_tag=YPN_1669 NC_008149.1 Protein Homology CDS 1884596 1885243 . + 0 ID=cds1716;Parent=gene1775;Dbxref=Genbank:WP_011055515.1;Name=WP_011055515.1;Note=receptor for colicin S4;gbkey=CDS;product=outer membrane protein W;protein_id=WP_011055515.1;transl_table=11 NC_008149.1 RefSeq gene 1885390 1885704 . - . ID=gene1776;Name=YPN_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08885;old_locus_tag=YPN_1670 NC_008149.1 Protein Homology CDS 1885390 1885704 . - 0 ID=cds1717;Parent=gene1776;Dbxref=Genbank:WP_002210636.1;Name=WP_002210636.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210636.1;transl_table=11 NC_008149.1 RefSeq gene 1886047 1886853 . - . ID=gene1777;Name=YPN_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08890;old_locus_tag=YPN_1672 NC_008149.1 Protein Homology CDS 1886047 1886853 . - 0 ID=cds1718;Parent=gene1777;Dbxref=Genbank:WP_002210634.1;Name=WP_002210634.1;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=WP_002210634.1;transl_table=11 NC_008149.1 RefSeq gene 1886853 1888043 . - . ID=gene1778;Name=YPN_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08895;old_locus_tag=YPN_1673 NC_008149.1 Protein Homology CDS 1886853 1888043 . - 0 ID=cds1719;Parent=gene1778;Dbxref=Genbank:WP_002210633.1;Name=WP_002210633.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11 NC_008149.1 RefSeq gene 1888200 1889627 . - . ID=gene1779;Name=YPN_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08900;old_locus_tag=YPN_1674 NC_008149.1 Protein Homology CDS 1888200 1889627 . - 0 ID=cds1720;Parent=gene1779;Dbxref=Genbank:WP_002228453.1;Name=WP_002228453.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;product=phosphoribosylanthranilate isomerase;protein_id=WP_002228453.1;transl_table=11 NC_008149.1 RefSeq gene 1889631 1890629 . - . ID=gene1780;Name=YPN_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08905;old_locus_tag=YPN_1675 NC_008149.1 Protein Homology CDS 1889631 1890629 . - 0 ID=cds1721;Parent=gene1780;Dbxref=Genbank:WP_002215980.1;Name=WP_002215980.1;gbkey=CDS;product=anthranilate phosphoribosyltransferase;protein_id=WP_002215980.1;transl_table=11 NC_008149.1 RefSeq gene 1890644 1891222 . - . ID=gene1781;Name=YPN_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08910;old_locus_tag=YPN_1676 NC_008149.1 Protein Homology CDS 1890644 1891222 . - 0 ID=cds1722;Parent=gene1781;Dbxref=Genbank:WP_002215981.1;Name=WP_002215981.1;gbkey=CDS;product=Anthranilate synthase component 2;protein_id=WP_002215981.1;transl_table=11 NC_008149.1 RefSeq gene 1891222 1892784 . - . ID=gene1782;Name=YPN_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08915;old_locus_tag=YPN_1677 NC_008149.1 Protein Homology CDS 1891222 1892784 . - 0 ID=cds1723;Parent=gene1782;Dbxref=Genbank:WP_002228454.1;Name=WP_002228454.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;product=anthranilate synthase subunit I;protein_id=WP_002228454.1;transl_table=11 NC_008149.1 RefSeq gene 1892903 1892965 . - . ID=gene1783;Name=YPN_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08920 NC_008149.1 Protein Homology CDS 1892903 1892965 . - 0 ID=cds1724;Parent=gene1783;Dbxref=Genbank:WP_002227930.1;Name=WP_002227930.1;gbkey=CDS;product=trp operon leader peptide;protein_id=WP_002227930.1;transl_table=11 NC_008149.1 RefSeq gene 1892994 1893122 . - . ID=gene1784;Name=YPN_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08925 NC_008149.1 Protein Homology CDS 1892994 1893122 . - 0 ID=cds1725;Parent=gene1784;Dbxref=Genbank:WP_002215982.1;Name=WP_002215982.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215982.1;transl_table=11 NC_008149.1 RefSeq gene 1893203 1894138 . + . ID=gene1785;Name=YPN_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08930;old_locus_tag=YPN_1678 NC_008149.1 Protein Homology CDS 1893203 1894138 . + 0 ID=cds1726;Parent=gene1785;Dbxref=Genbank:WP_002210629.1;Name=WP_002210629.1;gbkey=CDS;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=WP_002210629.1;transl_table=11 NC_008149.1 RefSeq gene 1894155 1894775 . + . ID=gene1786;Name=YPN_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08935;old_locus_tag=YPN_1679 NC_008149.1 Protein Homology CDS 1894155 1894775 . + 0 ID=cds1727;Parent=gene1786;Dbxref=Genbank:WP_002210628.1;Name=WP_002210628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210628.1;transl_table=11 NC_008149.1 RefSeq gene 1895139 1896173 . + . ID=gene1787;Name=YPN_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08940;old_locus_tag=YPN_1680 NC_008149.1 Protein Homology CDS 1895139 1896173 . + 0 ID=cds1728;Parent=gene1787;Dbxref=Genbank:WP_002210627.1;Name=WP_002210627.1;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=WP_002210627.1;transl_table=11 NC_008149.1 RefSeq gene 1896296 1896886 . - . ID=gene1788;Name=YPN_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08945;old_locus_tag=YPN_1681 NC_008149.1 Protein Homology CDS 1896296 1896886 . - 0 ID=cds1729;Parent=gene1788;Dbxref=Genbank:WP_002210626.1;Name=WP_002210626.1;Note=catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin;gbkey=CDS;product=cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase;protein_id=WP_002210626.1;transl_table=11 NC_008149.1 RefSeq gene 1896903 1897664 . - . ID=gene1789;Name=YPN_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08950;old_locus_tag=YPN_1682 NC_008149.1 Protein Homology CDS 1896903 1897664 . - 0 ID=cds1730;Parent=gene1789;Dbxref=Genbank:WP_002210625.1;Name=WP_002210625.1;gbkey=CDS;product=oxoacyl-ACP reductase;protein_id=WP_002210625.1;transl_table=11 NC_008149.1 RefSeq gene 1897836 1898882 . + . ID=gene1790;Name=YPN_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08955;old_locus_tag=YPN_1683 NC_008149.1 Protein Homology CDS 1897836 1898882 . + 0 ID=cds1731;Parent=gene1790;Dbxref=Genbank:WP_002210624.1;Name=WP_002210624.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;product=peptidase;protein_id=WP_002210624.1;transl_table=11 NC_008149.1 RefSeq gene 1899001 1899252 . - . ID=gene1791;Name=YPN_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08960;old_locus_tag=YPN_1684 NC_008149.1 Protein Homology CDS 1899001 1899252 . - 0 ID=cds1732;Parent=gene1791;Dbxref=Genbank:WP_002210623.1;Name=WP_002210623.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210623.1;transl_table=11 NC_008149.1 RefSeq gene 1899345 1899644 . + . ID=gene1792;Name=YPN_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08965;old_locus_tag=YPN_1685 NC_008149.1 Protein Homology CDS 1899345 1899644 . + 0 ID=cds1733;Parent=gene1792;Dbxref=Genbank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11 NC_008149.1 RefSeq gene 1899671 1902286 . + . ID=gene1793;Name=YPN_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08970;old_locus_tag=YPN_1686 NC_008149.1 Protein Homology CDS 1899671 1902286 . + 0 ID=cds1734;Parent=gene1793;Dbxref=Genbank:WP_002210622.1;Name=WP_002210622.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_002210622.1;transl_table=11 NC_008149.1 RefSeq gene 1902683 1903657 . + . ID=gene1794;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=YPN_RS08975;old_locus_tag=YPN_1687 NC_008149.1 Protein Homology CDS 1902683 1903657 . + 0 ID=cds1735;Parent=gene1794;Dbxref=Genbank:WP_002210621.1;Name=WP_002210621.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=CysB family transcriptional regulator;protein_id=WP_002210621.1;transl_table=11 NC_008149.1 RefSeq gene 1903993 1904850 . + . ID=gene1795;Name=YPN_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08980;old_locus_tag=YPN_1688 NC_008149.1 Protein Homology CDS 1903993 1904850 . + 0 ID=cds1736;Parent=gene1795;Dbxref=Genbank:WP_002210620.1;Name=WP_002210620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210620.1;transl_table=11 NC_008149.1 RefSeq gene 1905214 1907886 . + . ID=gene1796;Name=YPN_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08985;old_locus_tag=YPN_1689 NC_008149.1 Protein Homology CDS 1905214 1907886 . + 0 ID=cds1737;Parent=gene1796;Dbxref=Genbank:WP_002215187.1;Name=WP_002215187.1;Note=Catalyzes the conversion of citrate to isocitrate;gbkey=CDS;product=aconitate hydratase;protein_id=WP_002215187.1;transl_table=11 NC_008149.1 RefSeq gene 1908050 1908640 . - . ID=gene1797;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=YPN_RS08990;old_locus_tag=YPN_1690 NC_008149.1 Protein Homology CDS 1908050 1908640 . - 0 ID=cds1738;Parent=gene1797;Dbxref=Genbank:WP_002227926.1;Name=WP_002227926.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase-2;protein_id=WP_002227926.1;transl_table=11 NC_008149.1 RefSeq gene 1909146 1909907 . + . ID=gene1798;Name=YPN_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS08995;old_locus_tag=YPN_1692 NC_008149.1 Protein Homology CDS 1909146 1909907 . + 0 ID=cds1739;Parent=gene1798;Dbxref=Genbank:WP_002210617.1;Name=WP_002210617.1;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=WP_002210617.1;transl_table=11 NC_008149.1 RefSeq gene 1910076 1910387 . + . ID=gene1799;Name=YPN_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09000;old_locus_tag=YPN_1693 NC_008149.1 Protein Homology CDS 1910076 1910387 . + 0 ID=cds1740;Parent=gene1799;Dbxref=Genbank:WP_002210616.1;Name=WP_002210616.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210616.1;transl_table=11 NC_008149.1 RefSeq gene 1910394 1911563 . + . ID=gene1800;Name=YPN_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09005;old_locus_tag=YPN_1694 NC_008149.1 Protein Homology CDS 1910394 1911563 . + 0 ID=cds1741;Parent=gene1800;Dbxref=Genbank:WP_002210615.1;Name=WP_002210615.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210615.1;transl_table=11 NC_008149.1 RefSeq gene 1911685 1911984 . - . ID=gene1801;Name=YPN_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09010;old_locus_tag=YPN_1695 NC_008149.1 Protein Homology CDS 1911685 1911984 . - 0 ID=cds1742;Parent=gene1801;Dbxref=Genbank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11 NC_008149.1 RefSeq gene 1912454 1913191 . + . ID=gene1802;Name=YPN_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09015;old_locus_tag=YPN_1696 NC_008149.1 Protein Homology CDS 1912454 1913191 . + 0 ID=cds1743;Parent=gene1802;Dbxref=Genbank:WP_002210613.1;Name=WP_002210613.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_002210613.1;transl_table=11 NC_008149.1 RefSeq gene 1913191 1913517 . + . ID=gene1803;Name=YPN_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09020;old_locus_tag=YPN_1697 NC_008149.1 Protein Homology CDS 1913191 1913517 . + 0 ID=cds1744;Parent=gene1803;Dbxref=Genbank:WP_002210612.1;Name=WP_002210612.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;product=translation initiation factor Sui1;protein_id=WP_002210612.1;transl_table=11 NC_008149.1 RefSeq gene 1913755 1913970 . - . ID=gene1804;Name=YPN_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09025;old_locus_tag=YPN_1698 NC_008149.1 Protein Homology CDS 1913755 1913970 . - 0 ID=cds1745;Parent=gene1804;Dbxref=Genbank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210611.1;transl_table=11 NC_008149.1 RefSeq gene 1914450 1915145 . + . ID=gene1805;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPN_RS09030;old_locus_tag=YPN_1699 NC_008149.1 Protein Homology CDS 1914450 1915145 . + 0 ID=cds1746;Parent=gene1805;Dbxref=Genbank:WP_002210610.1;Name=WP_002210610.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002210610.1;transl_table=11 NC_008149.1 RefSeq gene 1915174 1915422 . - . ID=gene1806;Name=YPN_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09035;old_locus_tag=YPN_1700 NC_008149.1 Protein Homology CDS 1915174 1915422 . - 0 ID=cds1747;Parent=gene1806;Dbxref=Genbank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210609.1;transl_table=11 NC_008149.1 RefSeq gene 1915756 1916421 . + . ID=gene1807;Name=YPN_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09040;old_locus_tag=YPN_1701 NC_008149.1 Protein Homology CDS 1915756 1916421 . + 0 ID=cds1748;Parent=gene1807;Dbxref=Genbank:WP_002215192.1;Name=WP_002215192.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=WP_002215192.1;transl_table=11 NC_008149.1 RefSeq gene 1916538 1916843 . - . ID=gene1808;Name=YPN_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09045;old_locus_tag=YPN_1702 NC_008149.1 Protein Homology CDS 1916538 1916843 . - 0 ID=cds1749;Parent=gene1808;Dbxref=Genbank:WP_002210607.1;Name=WP_002210607.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210607.1;transl_table=11 NC_008149.1 RefSeq gene 1916836 1918902 . - . ID=gene1809;Name=YPN_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09050;old_locus_tag=YPN_1703 NC_008149.1 Protein Homology CDS 1916836 1918902 . - 0 ID=cds1750;Parent=gene1809;Dbxref=Genbank:WP_002220371.1;Name=WP_002220371.1;gbkey=CDS;product=carbon starvation protein A;protein_id=WP_002220371.1;transl_table=11 NC_008149.1 RefSeq gene 1919252 1921186 . - . ID=gene1810;Name=YPN_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09055;old_locus_tag=YPN_1704 NC_008149.1 Protein Homology CDS 1919252 1921186 . - 0 ID=cds1751;Parent=gene1810;Dbxref=Genbank:WP_002210605.1;Name=WP_002210605.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;product=exoribonuclease 2;protein_id=WP_002210605.1;transl_table=11 NC_008149.1 RefSeq gene 1921855 1923165 . + . ID=gene1811;Name=YPN_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09060;old_locus_tag=YPN_1705 NC_008149.1 Protein Homology CDS 1921855 1923165 . + 0 ID=cds1752;Parent=gene1811;Dbxref=Genbank:WP_002210604.1;Name=WP_002210604.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210604.1;transl_table=11 NC_008149.1 RefSeq gene 1923203 1924201 . + . ID=gene1812;Name=YPN_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09065;old_locus_tag=YPN_1706 NC_008149.1 Protein Homology CDS 1923203 1924201 . + 0 ID=cds1753;Parent=gene1812;Dbxref=Genbank:WP_002210603.1;Name=WP_002210603.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210603.1;transl_table=11 NC_008149.1 RefSeq gene 1924384 1925025 . - . ID=gene1813;Name=YPN_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09070;old_locus_tag=YPN_1707 NC_008149.1 Protein Homology CDS 1924384 1925025 . - 0 ID=cds1754;Parent=gene1813;Dbxref=Genbank:WP_002210602.1;Name=WP_002210602.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11 NC_008149.1 RefSeq gene 1925022 1925723 . - . ID=gene1814;Name=YPN_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09075;old_locus_tag=YPN_1708 NC_008149.1 Protein Homology CDS 1925022 1925723 . - 0 ID=cds1755;Parent=gene1814;Dbxref=Genbank:WP_002210601.1;Name=WP_002210601.1;gbkey=CDS;product=electron transport complex subunit E;protein_id=WP_002210601.1;transl_table=11 NC_008149.1 RefSeq gene 1925720 1926349 . - . ID=gene1815;Name=YPN_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09080;old_locus_tag=YPN_1709 NC_008149.1 Protein Homology CDS 1925720 1926349 . - 0 ID=cds1756;Parent=gene1815;Dbxref=Genbank:WP_002210600.1;Name=WP_002210600.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit G;protein_id=WP_002210600.1;transl_table=11 NC_008149.1 RefSeq gene 1926359 1927453 . - . ID=gene1816;Name=YPN_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09085;old_locus_tag=YPN_1710 NC_008149.1 Protein Homology CDS 1926359 1927453 . - 0 ID=cds1757;Parent=gene1816;Dbxref=Genbank:WP_002210599.1;Name=WP_002210599.1;gbkey=CDS;product=electron transporter RnfG;protein_id=WP_002210599.1;transl_table=11 NC_008149.1 RefSeq gene 1927942 1928835 . + . ID=gene1817;Name=YPN_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09090;old_locus_tag=YPN_1711 NC_008149.1 Protein Homology CDS 1927942 1928835 . + 0 ID=cds1758;Parent=gene1817;Dbxref=Genbank:WP_002210598.1;Name=WP_002210598.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210598.1;transl_table=11 NC_008149.1 RefSeq gene 1928940 1930919 . - . ID=gene1818;Name=YPN_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09095;old_locus_tag=YPN_1712 NC_008149.1 Protein Homology CDS 1928940 1930919 . - 0 ID=cds1759;Parent=gene1818;Dbxref=Genbank:WP_002223606.1;Name=WP_002223606.1;gbkey=CDS;product=electron transport complex subunit C;protein_id=WP_002223606.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1928959 1929233 . + . ID=id171;gbkey=repeat_region NC_008149.1 RefSeq gene 1930969 1931535 . - . ID=gene1819;Name=YPN_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09100;old_locus_tag=YPN_1713 NC_008149.1 Protein Homology CDS 1930969 1931535 . - 0 ID=cds1760;Parent=gene1819;Dbxref=Genbank:WP_002210596.1;Name=WP_002210596.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex subunit B;protein_id=WP_002210596.1;transl_table=11 NC_008149.1 RefSeq gene 1931535 1932116 . - . ID=gene1820;Name=YPN_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09105;old_locus_tag=YPN_1714 NC_008149.1 Protein Homology CDS 1931535 1932116 . - 0 ID=cds1761;Parent=gene1820;Dbxref=Genbank:WP_002210595.1;Name=WP_002210595.1;gbkey=CDS;product=electron transport complex subunit A;protein_id=WP_002210595.1;transl_table=11 NC_008149.1 RefSeq gene 1932244 1932687 . - . ID=gene1821;Name=YPN_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09110;old_locus_tag=YPN_1715 NC_008149.1 Protein Homology CDS 1932244 1932687 . - 0 ID=cds1762;Parent=gene1821;Dbxref=Genbank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210594.1;transl_table=11 NC_008149.1 RefSeq gene 1933162 1934946 . + . ID=gene1822;Name=YPN_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09115;old_locus_tag=YPN_1717 NC_008149.1 Protein Homology CDS 1933162 1934946 . + 0 ID=cds1763;Parent=gene1822;Dbxref=Genbank:WP_002215879.1;Name=WP_002215879.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002215879.1;transl_table=11 NC_008149.1 RefSeq gene 1934999 1935220 . + . ID=gene1823;Name=YPN_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09120;old_locus_tag=YPN_1718 NC_008149.1 GeneMarkS+ CDS 1934999 1935220 . + 0 ID=cds1764;Parent=gene1823;Dbxref=Genbank:WP_002215880.1;Name=WP_002215880.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215880.1;transl_table=11 NC_008149.1 RefSeq gene 1935245 1936246 . + . ID=gene1824;Name=YPN_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09125;old_locus_tag=YPN_1719 NC_008149.1 Protein Homology CDS 1935245 1936246 . + 0 ID=cds1765;Parent=gene1824;Dbxref=Genbank:WP_002215881.1;Name=WP_002215881.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002215881.1;transl_table=11 NC_008149.1 RefSeq gene 1936246 1936614 . + . ID=gene1825;Name=YPN_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09130;old_locus_tag=YPN_1720 NC_008149.1 Protein Homology CDS 1936246 1936614 . + 0 ID=cds1766;Parent=gene1825;Dbxref=Genbank:WP_002215882.1;Name=WP_002215882.1;gbkey=CDS;product=hemolysin D;protein_id=WP_002215882.1;transl_table=11 NC_008149.1 RefSeq gene 1936616 1938754 . + . ID=gene1826;Name=YPN_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09135;old_locus_tag=YPN_1721 NC_008149.1 Protein Homology CDS 1936616 1938754 . + 0 ID=cds1767;Parent=gene1826;Dbxref=Genbank:WP_002210593.1;Name=WP_002210593.1;gbkey=CDS;product=peptidase C39;protein_id=WP_002210593.1;transl_table=11 NC_008149.1 RefSeq gene 1938944 1940446 . - . ID=gene1827;Name=YPN_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09140;old_locus_tag=YPN_1722 NC_008149.1 Protein Homology CDS 1938944 1940446 . - 0 ID=cds1768;Parent=gene1827;Dbxref=Genbank:WP_002228461.1;Name=WP_002228461.1;gbkey=CDS;product=L-arabinose isomerase;protein_id=WP_002228461.1;transl_table=11 NC_008149.1 RefSeq gene 1940530 1942233 . - . ID=gene1828;Name=YPN_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09145;old_locus_tag=YPN_1723 NC_008149.1 Protein Homology CDS 1940530 1942233 . - 0 ID=cds1769;Parent=gene1828;Dbxref=Genbank:WP_002210590.1;Name=WP_002210590.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;product=ribulokinase;protein_id=WP_002210590.1;transl_table=11 NC_008149.1 RefSeq gene 1942641 1943624 . + . ID=gene1829;Name=YPN_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09150;old_locus_tag=YPN_1724 NC_008149.1 Protein Homology CDS 1942641 1943624 . + 0 ID=cds1770;Parent=gene1829;Dbxref=Genbank:WP_002210589.1;Name=WP_002210589.1;Note=with AraGH is involved in the transport of arabinose into the cell;gbkey=CDS;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002210589.1;transl_table=11 NC_008149.1 RefSeq gene 1943722 1945293 . + . ID=gene1830;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=YPN_RS09155;old_locus_tag=YPN_1725 NC_008149.1 Protein Homology CDS 1943722 1945293 . + 0 ID=cds1771;Parent=gene1830;Dbxref=Genbank:WP_002210588.1;Name=WP_002210588.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=arabinose import ATP-binding protein AraG;protein_id=WP_002210588.1;transl_table=11 NC_008149.1 RefSeq gene 1945311 1946360 . + . ID=gene1831;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=YPN_RS09160;old_locus_tag=YPN_1726 NC_008149.1 Protein Homology CDS 1945311 1946360 . + 0 ID=cds1772;Parent=gene1831;Dbxref=Genbank:WP_002210587.1;Name=WP_002210587.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=arabinose ABC transporter permease;protein_id=WP_002210587.1;transl_table=11 NC_008149.1 RefSeq gene 1946581 1947511 . + . ID=gene1832;Name=YPN_RS09165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS09165;old_locus_tag=YPN_1727;pseudo=true NC_008149.1 Protein Homology CDS 1946581 1947511 . + 0 ID=cds1773;Parent=gene1832;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 1947639 1948688 . + . ID=gene1833;Name=YPN_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09170;old_locus_tag=YPN_1729 NC_008149.1 Protein Homology CDS 1947639 1948688 . + 0 ID=cds1774;Parent=gene1833;Dbxref=Genbank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11 NC_008149.1 RefSeq gene 1948882 1949910 . + . ID=gene1834;Name=YPN_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09175;old_locus_tag=YPN_1730 NC_008149.1 Protein Homology CDS 1948882 1949910 . + 0 ID=cds1775;Parent=gene1834;Dbxref=Genbank:WP_002210584.1;Name=WP_002210584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210584.1;transl_table=11 NC_008149.1 RefSeq gene 1950116 1950715 . + . ID=gene1835;Name=YPN_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09180;old_locus_tag=YPN_1732 NC_008149.1 Protein Homology CDS 1950116 1950715 . + 0 ID=cds1776;Parent=gene1835;Dbxref=Genbank:WP_002210583.1;Name=WP_002210583.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210583.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1950820 1952139 . + . ID=id172;gbkey=repeat_region NC_008149.1 RefSeq gene 1950856 1952064 . - . ID=gene1836;Name=YPN_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09185;old_locus_tag=YPN_1733 NC_008149.1 Protein Homology CDS 1950856 1952064 . - 0 ID=cds1777;Parent=gene1836;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 1952126 1953631 . - . ID=gene1837;Name=YPN_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09190;old_locus_tag=YPN_1734 NC_008149.1 Protein Homology CDS 1952126 1953631 . - 0 ID=cds1778;Parent=gene1837;Dbxref=Genbank:WP_002228462.1;Name=WP_002228462.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228462.1;transl_table=11 NC_008149.1 RefSeq gene 1953871 1955046 . - . ID=gene1838;Name=YPN_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09195;old_locus_tag=YPN_1735 NC_008149.1 Protein Homology CDS 1953871 1955046 . - 0 ID=cds1779;Parent=gene1838;Dbxref=Genbank:WP_002210579.1;Name=WP_002210579.1;Note=catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=WP_002210579.1;transl_table=11 NC_008149.1 RefSeq gene 1955330 1956727 . + . ID=gene1839;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=YPN_RS09200;old_locus_tag=YPN_1736 NC_008149.1 Protein Homology CDS 1955330 1956727 . + 0 ID=cds1780;Parent=gene1839;Dbxref=Genbank:WP_002210578.1;Name=WP_002210578.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase class II;protein_id=WP_002210578.1;transl_table=11 NC_008149.1 RefSeq gene 1956807 1957742 . - . ID=gene1840;Name=YPN_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09205;old_locus_tag=YPN_1737 NC_008149.1 Protein Homology CDS 1956807 1957742 . - 0 ID=cds1781;Parent=gene1840;Dbxref=Genbank:WP_002227921.1;Name=WP_002227921.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=WP_002227921.1;transl_table=11 NC_008149.1 RefSeq gene 1957947 1959245 . - . ID=gene1841;Name=YPN_RS09210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS09210;old_locus_tag=YPN_1738;pseudo=true NC_008149.1 Protein Homology CDS 1957947 1959245 . - 0 ID=cds1782;Parent=gene1841;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(1958127..1958129)%2Caa:Other);transl_table=11 NC_008149.1 RefSeq gene 1959458 1960336 . + . ID=gene1842;Name=YPN_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09215;old_locus_tag=YPN_1739 NC_008149.1 Protein Homology CDS 1959458 1960336 . + 0 ID=cds1783;Parent=gene1842;Dbxref=Genbank:WP_002220360.1;Name=WP_002220360.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220360.1;transl_table=11 NC_008149.1 RefSeq gene 1960550 1961761 . + . ID=gene1843;Name=YPN_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09220;old_locus_tag=YPN_1740 NC_008149.1 Protein Homology CDS 1960550 1961761 . + 0 ID=cds1784;Parent=gene1843;Dbxref=Genbank:WP_002228464.1;Name=WP_002228464.1;Note=mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002228464.1;transl_table=11 NC_008149.1 RefSeq gene 1961710 1962348 . + . ID=gene1844;Name=YPN_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09225;old_locus_tag=YPN_1741 NC_008149.1 Protein Homology CDS 1961710 1962348 . + 0 ID=cds1785;Parent=gene1844;Dbxref=Genbank:WP_029817508.1;Name=WP_029817508.1;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;gbkey=CDS;product=dethiobiotin synthetase;protein_id=WP_029817508.1;transl_table=11 NC_008149.1 RefSeq gene 1962471 1963751 . - . ID=gene1845;Name=YPN_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09230;old_locus_tag=YPN_1742 NC_008149.1 Protein Homology CDS 1962471 1963751 . - 0 ID=cds1786;Parent=gene1845;Dbxref=Genbank:WP_002210574.1;Name=WP_002210574.1;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_002210574.1;transl_table=11 NC_008149.1 RefSeq gene 1964119 1964229 . - . ID=gene1846;Name=YPN_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09235 NC_008149.1 Protein Homology CDS 1964119 1964229 . - 0 ID=cds1787;Parent=gene1846;Dbxref=Genbank:WP_002214514.1;Name=WP_002214514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214514.1;transl_table=11 NC_008149.1 RefSeq gene 1964351 1965367 . - . ID=gene1847;Name=YPN_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09240;old_locus_tag=YPN_1743 NC_008149.1 Protein Homology CDS 1964351 1965367 . - 0 ID=cds1788;Parent=gene1847;Dbxref=Genbank:WP_002211038.1;Name=WP_002211038.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211038.1;transl_table=11 NC_008149.1 RefSeq gene 1965431 1965901 . - . ID=gene1848;Name=YPN_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09245;old_locus_tag=YPN_1744 NC_008149.1 Protein Homology CDS 1965431 1965901 . - 0 ID=cds1789;Parent=gene1848;Dbxref=Genbank:WP_002211037.1;Name=WP_002211037.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211037.1;transl_table=11 NC_008149.1 RefSeq gene 1966045 1966395 . - . ID=gene1849;Name=YPN_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09250;old_locus_tag=YPN_1745 NC_008149.1 Protein Homology CDS 1966045 1966395 . - 0 ID=cds1790;Parent=gene1849;Dbxref=Genbank:WP_002211036.1;Name=WP_002211036.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211036.1;transl_table=11 NC_008149.1 RefSeq gene 1966834 1967865 . + . ID=gene1850;Name=YPN_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09255;old_locus_tag=YPN_1746 NC_008149.1 Protein Homology CDS 1966834 1967865 . + 0 ID=cds1791;Parent=gene1850;Dbxref=Genbank:WP_002211035.1;Name=WP_002211035.1;gbkey=CDS;product=myristoyl transferase;protein_id=WP_002211035.1;transl_table=11 NC_008149.1 RefSeq gene 1967869 1968690 . + . ID=gene1851;Name=YPN_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09260;old_locus_tag=YPN_1747 NC_008149.1 Protein Homology CDS 1967869 1968690 . + 0 ID=cds1792;Parent=gene1851;Dbxref=Genbank:WP_002211034.1;Name=WP_002211034.1;gbkey=CDS;product=sulfonate ABC transporter permease;protein_id=WP_002211034.1;transl_table=11 NC_008149.1 RefSeq gene 1968700 1969518 . + . ID=gene1852;Name=YPN_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09265;old_locus_tag=YPN_1748 NC_008149.1 Protein Homology CDS 1968700 1969518 . + 0 ID=cds1793;Parent=gene1852;Dbxref=Genbank:WP_002223602.1;Name=WP_002223602.1;gbkey=CDS;product=sulfonate ABC transporter ATP-binding protein;protein_id=WP_002223602.1;transl_table=11 NC_008149.1 RefSeq gene 1969943 1971433 . - . ID=gene1853;Name=YPN_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09270;old_locus_tag=YPN_1749 NC_008149.1 Protein Homology CDS 1969943 1971433 . - 0 ID=cds1794;Parent=gene1853;Dbxref=Genbank:WP_002223601.1;Name=WP_002223601.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;product=AMP nucleosidase;protein_id=WP_002223601.1;transl_table=11 NC_008149.1 RefSeq gene 1971639 1973072 . + . ID=gene1854;Name=YPN_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09275;old_locus_tag=YPN_1750 NC_008149.1 Protein Homology CDS 1971639 1973072 . + 0 ID=cds1795;Parent=gene1854;Dbxref=Genbank:WP_002211031.1;Name=WP_002211031.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211031.1;transl_table=11 NC_008149.1 RefSeq gene 1973077 1976148 . + . ID=gene1855;Name=YPN_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09280;old_locus_tag=YPN_1751 NC_008149.1 Protein Homology CDS 1973077 1976148 . + 0 ID=cds1796;Parent=gene1855;Dbxref=Genbank:WP_002211030.1;Name=WP_002211030.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211030.1;transl_table=11 NC_008149.1 RefSeq gene 1976145 1978620 . + . ID=gene1856;Name=YPN_RS09285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS09285;pseudo=true NC_008149.1 Protein Homology CDS 1976145 1978620 . + 0 ID=cds1797;Parent=gene1856;exception=annotated by transcript or proteomic data;gbkey=CDS;product=virulence factor;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 1978789 1979583 . - . ID=gene1857;Name=YPN_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09290;old_locus_tag=YPN_1754 NC_008149.1 Protein Homology CDS 1978789 1979583 . - 0 ID=cds1798;Parent=gene1857;Dbxref=Genbank:WP_002220345.1;Name=WP_002220345.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220345.1;transl_table=11 NC_008149.1 RefSeq gene 1980178 1981845 . + . ID=gene1858;Name=YPN_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09295;old_locus_tag=YPN_1755 NC_008149.1 Protein Homology CDS 1980178 1981845 . + 0 ID=cds1799;Parent=gene1858;Dbxref=Genbank:WP_002211027.1;Name=WP_002211027.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002211027.1;transl_table=11 NC_008149.1 RefSeq gene 1981847 1982149 . + . ID=gene1859;Name=YPN_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09300;old_locus_tag=YPN_1756 NC_008149.1 Protein Homology CDS 1981847 1982149 . + 0 ID=cds1800;Parent=gene1859;Dbxref=Genbank:WP_002211026.1;Name=WP_002211026.1;gbkey=CDS;product=acetolactate synthase;protein_id=WP_002211026.1;transl_table=11 NC_008149.1 RefSeq gene 1982216 1982890 . - . ID=gene1860;Name=YPN_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09305;old_locus_tag=YPN_1757 NC_008149.1 Protein Homology CDS 1982216 1982890 . - 0 ID=cds1801;Parent=gene1860;Dbxref=Genbank:WP_002211025.1;Name=WP_002211025.1;Note=manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily;gbkey=CDS;product=dUMP phosphatase;protein_id=WP_002211025.1;transl_table=11 NC_008149.1 RefSeq gene 1983021 1984406 . - . ID=gene1861;Name=YPN_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09310 NC_008149.1 Protein Homology CDS 1983021 1984406 . - 0 ID=cds1802;Parent=gene1861;Dbxref=Genbank:WP_002227914.1;Name=WP_002227914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227914.1;transl_table=11 NC_008149.1 RefSeq gene 1984406 1985417 . - . ID=gene1862;Name=YPN_RS09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS09315;pseudo=true NC_008149.1 Protein Homology CDS 1984406 1985417 . - 0 ID=cds1803;Parent=gene1862;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 1985963 1987408 . - . ID=gene1863;Name=YPN_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09320;old_locus_tag=YPN_1759 NC_008149.1 Protein Homology CDS 1985963 1987408 . - 0 ID=cds1804;Parent=gene1863;Dbxref=Genbank:WP_002211024.1;Name=WP_002211024.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002211024.1;transl_table=11 NC_008149.1 RefSeq gene 1987649 1988167 . + . ID=gene1864;Name=YPN_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09325;old_locus_tag=YPN_1760 NC_008149.1 Protein Homology CDS 1987649 1988167 . + 0 ID=cds1805;Parent=gene1864;Dbxref=Genbank:WP_002211023.1;Name=WP_002211023.1;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_002211023.1;transl_table=11 NC_008149.1 RefSeq gene 1988240 1988992 . + . ID=gene1865;Name=YPN_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09330;old_locus_tag=YPN_1761 NC_008149.1 Protein Homology CDS 1988240 1988992 . + 0 ID=cds1806;Parent=gene1865;Dbxref=Genbank:WP_002211022.1;Name=WP_002211022.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;product=fumarate and nitrate reduction regulatory protein;protein_id=WP_002211022.1;transl_table=11 NC_008149.1 RefSeq gene 1989127 1990083 . + . ID=gene1866;Name=YPN_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09335;old_locus_tag=YPN_1762 NC_008149.1 Protein Homology CDS 1989127 1990083 . + 0 ID=cds1807;Parent=gene1866;Dbxref=Genbank:WP_002228471.1;Name=WP_002228471.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;product=universal stress protein E;protein_id=WP_002228471.1;transl_table=11 NC_008149.1 RefSeq repeat_region 1990138 1990312 . + . ID=id173;gbkey=repeat_region NC_008149.1 RefSeq gene 1990358 1991752 . - . ID=gene1867;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=YPN_RS09340;old_locus_tag=YPN_1763 NC_008149.1 Protein Homology CDS 1990358 1991752 . - 0 ID=cds1808;Parent=gene1867;Dbxref=Genbank:WP_002211020.1;Name=WP_002211020.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=WP_002211020.1;transl_table=11 NC_008149.1 RefSeq gene 1991825 1993351 . - . ID=gene1868;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=YPN_RS09345;old_locus_tag=YPN_1764 NC_008149.1 Protein Homology CDS 1991825 1993351 . - 0 ID=cds1809;Parent=gene1868;Dbxref=Genbank:WP_002211019.1;Name=WP_002211019.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_002211019.1;transl_table=11 NC_008149.1 RefSeq gene 1993472 1993675 . - . ID=gene1869;Name=YPN_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09350 NC_008149.1 Protein Homology CDS 1993472 1993675 . - 0 ID=cds1810;Parent=gene1869;Dbxref=Genbank:WP_002227912.1;Name=WP_002227912.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227912.1;transl_table=11 NC_008149.1 RefSeq gene 1993881 1994834 . + . ID=gene1870;Name=YPN_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09355;old_locus_tag=YPN_1765 NC_008149.1 Protein Homology CDS 1993881 1994834 . + 0 ID=cds1811;Parent=gene1870;Dbxref=Genbank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211018.1;transl_table=11 NC_008149.1 RefSeq gene 1995104 1996495 . + . ID=gene1871;Name=YPN_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09360;old_locus_tag=YPN_1766 NC_008149.1 Protein Homology CDS 1995104 1996495 . + 0 ID=cds1812;Parent=gene1871;Dbxref=Genbank:WP_002211017.1;Name=WP_002211017.1;gbkey=CDS;product=arginine:ornithine antiporter;protein_id=WP_002211017.1;transl_table=11 NC_008149.1 RefSeq gene 1996519 1996935 . - . ID=gene1872;Name=YPN_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09365;old_locus_tag=YPN_1767 NC_008149.1 Protein Homology CDS 1996519 1996935 . - 0 ID=cds1813;Parent=gene1872;Dbxref=Genbank:WP_002211016.1;Name=WP_002211016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211016.1;transl_table=11 NC_008149.1 RefSeq gene 1997232 1997978 . + . ID=gene1873;Name=YPN_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09370;old_locus_tag=YPN_1768 NC_008149.1 Protein Homology CDS 1997232 1997978 . + 0 ID=cds1814;Parent=gene1873;Dbxref=Genbank:WP_002211015.1;Name=WP_002211015.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002211015.1;transl_table=11 NC_008149.1 RefSeq gene 1998027 1999283 . + . ID=gene1874;Name=YPN_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09375;old_locus_tag=YPN_1769 NC_008149.1 Protein Homology CDS 1998027 1999283 . + 0 ID=cds1815;Parent=gene1874;Dbxref=Genbank:WP_002354278.1;Name=WP_002354278.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002354278.1;transl_table=11 NC_008149.1 RefSeq gene 1999377 2000060 . + . ID=gene1875;Name=YPN_RS09380;end_range=2000060,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS09380;old_locus_tag=YPN_1770;partial=true;pseudo=true NC_008149.1 Protein Homology CDS 1999377 2000060 . + 0 ID=cds1816;Parent=gene1875;end_range=2000060,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=peptidase M32;pseudo=true;transl_table=11 NC_008149.1 RefSeq repeat_region 2000060 2001379 . + . ID=id174;gbkey=repeat_region NC_008149.1 RefSeq gene 2000134 2001342 . + . ID=gene1876;Name=YPN_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09385;old_locus_tag=YPN_1771 NC_008149.1 Protein Homology CDS 2000134 2001342 . + 0 ID=cds1817;Parent=gene1876;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 2001354 2002199 . + . ID=gene1877;Name=YPN_RS09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS09390;old_locus_tag=YPN_1772;partial=true;pseudo=true;start_range=.,2001354 NC_008149.1 Protein Homology CDS 2001354 2002199 . + 0 ID=cds1818;Parent=gene1877;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=peptidase M32;pseudo=true;start_range=.,2001354;transl_table=11 NC_008149.1 RefSeq repeat_region 2002211 2002928 . + . ID=id175;gbkey=repeat_region NC_008149.1 RefSeq gene 2002321 2002779 . - . ID=gene1878;Name=YPN_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09395;old_locus_tag=YPN_1773 NC_008149.1 Protein Homology CDS 2002321 2002779 . - 0 ID=cds1819;Parent=gene1878;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 2002769 2002939 . - . ID=gene1879;Name=YPN_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09400 NC_008149.1 Protein Homology CDS 2002769 2002939 . - 0 ID=cds1820;Parent=gene1879;Dbxref=Genbank:WP_025470768.1;Name=WP_025470768.1;gbkey=CDS;product=transposase;protein_id=WP_025470768.1;transl_table=11 NC_008149.1 RefSeq gene 2003749 2006373 . + . ID=gene1880;Name=YPN_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09405;old_locus_tag=YPN_1774 NC_008149.1 Protein Homology CDS 2003749 2006373 . + 0 ID=cds1821;Parent=gene1880;Dbxref=Genbank:WP_002211013.1;Name=WP_002211013.1;gbkey=CDS;product=toxin TccC3;protein_id=WP_002211013.1;transl_table=11 NC_008149.1 RefSeq gene 2006376 2006732 . + . ID=gene1881;Name=YPN_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09410;old_locus_tag=YPN_1775 NC_008149.1 Protein Homology CDS 2006376 2006732 . + 0 ID=cds1822;Parent=gene1881;Dbxref=Genbank:WP_002227910.1;Name=WP_002227910.1;gbkey=CDS;product=DNA gyrase;protein_id=WP_002227910.1;transl_table=11 NC_008149.1 RefSeq gene 2006836 2006994 . - . ID=gene1882;Name=YPN_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09415;old_locus_tag=YPN_1776 NC_008149.1 Protein Homology CDS 2006836 2006994 . - 0 ID=cds1823;Parent=gene1882;Dbxref=Genbank:WP_002214618.1;Name=WP_002214618.1;gbkey=CDS;product=invertase;protein_id=WP_002214618.1;transl_table=11 NC_008149.1 RefSeq gene 2007180 2007715 . - . ID=gene1883;Name=YPN_RS09420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS09420;old_locus_tag=YPN_1777;pseudo=true NC_008149.1 Protein Homology CDS 2007180 2007715 . - 0 ID=cds1824;Parent=gene1883;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cytochrome B;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2008110 2008322 . + . ID=gene1884;Name=YPN_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09425 NC_008149.1 Protein Homology CDS 2008110 2008322 . + 0 ID=cds1825;Parent=gene1884;Dbxref=Genbank:WP_002214613.1;Name=WP_002214613.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214613.1;transl_table=11 NC_008149.1 RefSeq gene 2008319 2008633 . + . ID=gene1885;Name=YPN_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09430;old_locus_tag=YPN_1778 NC_008149.1 Protein Homology CDS 2008319 2008633 . + 0 ID=cds1826;Parent=gene1885;Dbxref=Genbank:WP_002228477.1;Name=WP_002228477.1;gbkey=CDS;product=acid-shock protein;protein_id=WP_002228477.1;transl_table=11 NC_008149.1 RefSeq gene 2008967 2009803 . + . ID=gene1886;Name=YPN_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09435;old_locus_tag=YPN_1779 NC_008149.1 Protein Homology CDS 2008967 2009803 . + 0 ID=cds1827;Parent=gene1886;Dbxref=Genbank:WP_002211008.1;Name=WP_002211008.1;gbkey=CDS;product=peptidase;protein_id=WP_002211008.1;transl_table=11 NC_008149.1 RefSeq gene 2009859 2010182 . - . ID=gene1887;Name=YPN_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09440;old_locus_tag=YPN_1780 NC_008149.1 Protein Homology CDS 2009859 2010182 . - 0 ID=cds1828;Parent=gene1887;Dbxref=Genbank:WP_002211007.1;Name=WP_002211007.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211007.1;transl_table=11 NC_008149.1 RefSeq gene 2010179 2010508 . - . ID=gene1888;Name=YPN_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09445 NC_008149.1 Protein Homology CDS 2010179 2010508 . - 0 ID=cds1829;Parent=gene1888;Dbxref=Genbank:WP_002214609.1;Name=WP_002214609.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214609.1;transl_table=11 NC_008149.1 RefSeq gene 2010847 2014689 . - . ID=gene1889;Name=YPN_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09450;old_locus_tag=YPN_1781 NC_008149.1 Protein Homology CDS 2010847 2014689 . - 0 ID=cds1830;Parent=gene1889;Dbxref=Genbank:WP_002214608.1;Name=WP_002214608.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=WP_002214608.1;transl_table=11 NC_008149.1 RefSeq gene 2015157 2015762 . + . ID=gene1890;Name=YPN_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09455;old_locus_tag=YPN_1782 NC_008149.1 Protein Homology CDS 2015157 2015762 . + 0 ID=cds1831;Parent=gene1890;Dbxref=Genbank:WP_002211004.1;Name=WP_002211004.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11 NC_008149.1 RefSeq gene 2015883 2016839 . - . ID=gene1891;Name=YPN_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09460;old_locus_tag=YPN_1783 NC_008149.1 Protein Homology CDS 2015883 2016839 . - 0 ID=cds1832;Parent=gene1891;Dbxref=Genbank:WP_002211003.1;Name=WP_002211003.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211003.1;transl_table=11 NC_008149.1 RefSeq gene 2017049 2018440 . + . ID=gene1892;Name=YPN_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09465;old_locus_tag=YPN_1784 NC_008149.1 Protein Homology CDS 2017049 2018440 . + 0 ID=cds1833;Parent=gene1892;Dbxref=Genbank:WP_002211002.1;Name=WP_002211002.1;gbkey=CDS;product=D-arabinitol 4-dehydrogenase;protein_id=WP_002211002.1;transl_table=11 NC_008149.1 RefSeq gene 2018659 2019030 . - . ID=gene1893;Name=YPN_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09470;old_locus_tag=YPN_1785 NC_008149.1 Protein Homology CDS 2018659 2019030 . - 0 ID=cds1834;Parent=gene1893;Dbxref=Genbank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211001.1;transl_table=11 NC_008149.1 RefSeq gene 2019040 2019234 . - . ID=gene1894;Name=YPN_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09475;old_locus_tag=YPN_1786 NC_008149.1 Protein Homology CDS 2019040 2019234 . - 0 ID=cds1835;Parent=gene1894;Dbxref=Genbank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211000.1;transl_table=11 NC_008149.1 RefSeq gene 2019231 2021927 . - . ID=gene1895;Name=YPN_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09480;old_locus_tag=YPN_1787 NC_008149.1 Protein Homology CDS 2019231 2021927 . - 0 ID=cds1836;Parent=gene1895;Dbxref=Genbank:WP_002210999.1;Name=WP_002210999.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210999.1;transl_table=11 NC_008149.1 RefSeq gene 2022193 2023185 . + . ID=gene1896;Name=YPN_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09485;old_locus_tag=YPN_1788 NC_008149.1 Protein Homology CDS 2022193 2023185 . + 0 ID=cds1837;Parent=gene1896;Dbxref=Genbank:WP_002210998.1;Name=WP_002210998.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210998.1;transl_table=11 NC_008149.1 RefSeq gene 2023255 2023707 . + . ID=gene1897;Name=YPN_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09490;old_locus_tag=YPN_1789 NC_008149.1 Protein Homology CDS 2023255 2023707 . + 0 ID=cds1838;Parent=gene1897;Dbxref=Genbank:WP_002214605.1;Name=WP_002214605.1;gbkey=CDS;product=heat-inducible protein;protein_id=WP_002214605.1;transl_table=11 NC_008149.1 RefSeq gene 2023765 2024076 . - . ID=gene1898;Name=YPN_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09495;old_locus_tag=YPN_1790 NC_008149.1 Protein Homology CDS 2023765 2024076 . - 0 ID=cds1839;Parent=gene1898;Dbxref=Genbank:WP_002210996.1;Name=WP_002210996.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210996.1;transl_table=11 NC_008149.1 RefSeq gene 2024391 2025050 . + . ID=gene1899;Name=YPN_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09500;old_locus_tag=YPN_1791 NC_008149.1 Protein Homology CDS 2024391 2025050 . + 0 ID=cds1840;Parent=gene1899;Dbxref=Genbank:WP_002210995.1;Name=WP_002210995.1;gbkey=CDS;product=methyltransferase;protein_id=WP_002210995.1;transl_table=11 NC_008149.1 RefSeq gene 2025110 2025442 . - . ID=gene1900;Name=YPN_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09505;old_locus_tag=YPN_1792 NC_008149.1 Protein Homology CDS 2025110 2025442 . - 0 ID=cds1841;Parent=gene1900;Dbxref=Genbank:WP_002210994.1;Name=WP_002210994.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002210994.1;transl_table=11 NC_008149.1 RefSeq gene 2025921 2029454 . + . ID=gene1901;Name=YPN_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09510;old_locus_tag=YPN_1793 NC_008149.1 Protein Homology CDS 2025921 2029454 . + 0 ID=cds1842;Parent=gene1901;Dbxref=Genbank:WP_002210993.1;Name=WP_002210993.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_002210993.1;transl_table=11 NC_008149.1 RefSeq gene 2029729 2030670 . + . ID=gene1902;Name=YPN_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09515;old_locus_tag=YPN_1794 NC_008149.1 Protein Homology CDS 2029729 2030670 . + 0 ID=cds1843;Parent=gene1902;Dbxref=Genbank:WP_002210992.1;Name=WP_002210992.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C);gbkey=CDS;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=WP_002210992.1;transl_table=11 NC_008149.1 RefSeq gene 2030941 2031945 . + . ID=gene1903;Name=YPN_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09520;old_locus_tag=YPN_1795 NC_008149.1 Protein Homology CDS 2030941 2031945 . + 0 ID=cds1844;Parent=gene1903;Dbxref=Genbank:WP_002210991.1;Name=WP_002210991.1;gbkey=CDS;product=alpha/beta hydrolase;protein_id=WP_002210991.1;transl_table=11 NC_008149.1 RefSeq gene 2032257 2033096 . + . ID=gene1904;Name=YPN_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09525;old_locus_tag=YPN_1796 NC_008149.1 Protein Homology CDS 2032257 2033096 . + 0 ID=cds1845;Parent=gene1904;Dbxref=Genbank:WP_002210990.1;Name=WP_002210990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210990.1;transl_table=11 NC_008149.1 RefSeq gene 2033470 2034453 . - . ID=gene1905;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=YPN_RS09530;old_locus_tag=YPN_1798 NC_008149.1 Protein Homology CDS 2033470 2034453 . - 0 ID=cds1846;Parent=gene1905;Dbxref=Genbank:WP_002227906.1;Name=WP_002227906.1;gbkey=CDS;gene=zntB;product=zinc transporter ZntB;protein_id=WP_002227906.1;transl_table=11 NC_008149.1 RefSeq gene 2034696 2036312 . - . ID=gene1906;Name=YPN_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09535;old_locus_tag=YPN_1799 NC_008149.1 Protein Homology CDS 2034696 2036312 . - 0 ID=cds1847;Parent=gene1906;Dbxref=Genbank:WP_002210987.1;Name=WP_002210987.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210987.1;transl_table=11 NC_008149.1 RefSeq gene 2036753 2037460 . + . ID=gene1907;Name=YPN_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09540;old_locus_tag=YPN_1800 NC_008149.1 Protein Homology CDS 2036753 2037460 . + 0 ID=cds1848;Parent=gene1907;Dbxref=Genbank:WP_002220315.1;Name=WP_002220315.1;gbkey=CDS;product=murein peptide amidase A;protein_id=WP_002220315.1;transl_table=11 NC_008149.1 RefSeq gene 2037502 2038476 . - . ID=gene1908;Name=YPN_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09545;old_locus_tag=YPN_1801 NC_008149.1 Protein Homology CDS 2037502 2038476 . - 0 ID=cds1849;Parent=gene1908;Dbxref=Genbank:WP_002210985.1;Name=WP_002210985.1;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate;gbkey=CDS;product=mandelate racemase;protein_id=WP_002210985.1;transl_table=11 NC_008149.1 RefSeq gene 2038639 2039142 . + . ID=gene1909;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=YPN_RS09550;old_locus_tag=YPN_1802 NC_008149.1 Protein Homology CDS 2038639 2039142 . + 0 ID=cds1850;Parent=gene1909;Dbxref=Genbank:WP_002210984.1;Name=WP_002210984.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2039241 2039963 . + . ID=id176;gbkey=repeat_region NC_008149.1 RefSeq gene 2039395 2039853 . + . ID=gene1910;Name=YPN_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09555;old_locus_tag=YPN_1803 NC_008149.1 Protein Homology CDS 2039395 2039853 . + 0 ID=cds1851;Parent=gene1910;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 2040000 2041577 . - . ID=gene1911;Name=YPN_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09560;old_locus_tag=YPN_1804 NC_008149.1 Protein Homology CDS 2040000 2041577 . - 0 ID=cds1852;Parent=gene1911;Dbxref=Genbank:WP_002210983.1;Name=WP_002210983.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210983.1;transl_table=11 NC_008149.1 RefSeq gene 2041913 2042359 . + . ID=gene1912;Name=YPN_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09565;old_locus_tag=YPN_1805 NC_008149.1 Protein Homology CDS 2041913 2042359 . + 0 ID=cds1853;Parent=gene1912;Dbxref=Genbank:WP_002210982.1;Name=WP_002210982.1;gbkey=CDS;product=TIGR02293 family toxin-antitoxin system antitoxin component;protein_id=WP_002210982.1;transl_table=11 NC_008149.1 RefSeq gene 2042421 2042879 . + . ID=gene1913;Name=YPN_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09570;old_locus_tag=YPN_1806 NC_008149.1 Protein Homology CDS 2042421 2042879 . + 0 ID=cds1854;Parent=gene1913;Dbxref=Genbank:WP_002210981.1;Name=WP_002210981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210981.1;transl_table=11 NC_008149.1 RefSeq gene 2042889 2043950 . - . ID=gene1914;Name=YPN_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09575;old_locus_tag=YPN_1807 NC_008149.1 Protein Homology CDS 2042889 2043950 . - 0 ID=cds1855;Parent=gene1914;Dbxref=Genbank:WP_002210980.1;Name=WP_002210980.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210980.1;transl_table=11 NC_008149.1 RefSeq gene 2043947 2045344 . - . ID=gene1915;Name=YPN_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09580;old_locus_tag=YPN_1808 NC_008149.1 Protein Homology CDS 2043947 2045344 . - 0 ID=cds1856;Parent=gene1915;Dbxref=Genbank:WP_002210979.1;Name=WP_002210979.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210979.1;transl_table=11 NC_008149.1 RefSeq gene 2045325 2045564 . - . ID=gene1916;Name=YPN_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09585;old_locus_tag=YPN_1809 NC_008149.1 Protein Homology CDS 2045325 2045564 . - 0 ID=cds1857;Parent=gene1916;Dbxref=Genbank:WP_002386267.1;Name=WP_002386267.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002386267.1;transl_table=11 NC_008149.1 RefSeq gene 2045652 2046011 . - . ID=gene1917;Name=YPN_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09590;old_locus_tag=YPN_1810 NC_008149.1 Protein Homology CDS 2045652 2046011 . - 0 ID=cds1858;Parent=gene1917;Dbxref=Genbank:WP_002210977.1;Name=WP_002210977.1;Note=with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210977.1;transl_table=11 NC_008149.1 RefSeq gene 2046011 2046238 . - . ID=gene1918;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=YPN_RS09595;old_locus_tag=YPN_1811 NC_008149.1 Protein Homology CDS 2046011 2046238 . - 0 ID=cds1859;Parent=gene1918;Dbxref=Genbank:WP_002210976.1;Name=WP_002210976.1;Note=DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=WP_002210976.1;transl_table=11 NC_008149.1 RefSeq gene 2046400 2047065 . - . ID=gene1919;Name=YPN_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09600;old_locus_tag=YPN_1812 NC_008149.1 Protein Homology CDS 2046400 2047065 . - 0 ID=cds1860;Parent=gene1919;Dbxref=Genbank:WP_002210975.1;Name=WP_002210975.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;product=phage-shock protein;protein_id=WP_002210975.1;transl_table=11 NC_008149.1 RefSeq gene 2047310 2048338 . + . ID=gene1920;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=YPN_RS09605;old_locus_tag=YPN_1813 NC_008149.1 Protein Homology CDS 2047310 2048338 . + 0 ID=cds1861;Parent=gene1920;Dbxref=Genbank:WP_002210974.1;Name=WP_002210974.1;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;gbkey=CDS;gene=pspF;product=transcriptional regulator;protein_id=WP_002210974.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2048392 2049113 . + . ID=id177;gbkey=repeat_region NC_008149.1 RefSeq gene 2048503 2048961 . - . ID=gene1921;Name=YPN_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09610;old_locus_tag=YPN_1814 NC_008149.1 Protein Homology CDS 2048503 2048961 . - 0 ID=cds1862;Parent=gene1921;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 2048951 2049118 . - . ID=gene1922;Name=YPN_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09615 NC_008149.1 Protein Homology CDS 2048951 2049118 . - 0 ID=cds1863;Parent=gene1922;Dbxref=Genbank:WP_002430114.1;Name=WP_002430114.1;gbkey=CDS;product=invasin;protein_id=WP_002430114.1;transl_table=11 NC_008149.1 RefSeq gene 2049305 2049483 . + . ID=gene1923;Name=YPN_RS09620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS09620;pseudo=true NC_008149.1 Protein Homology CDS 2049305 2049483 . + 0 ID=cds1864;Parent=gene1923;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2049619 2051265 . + . ID=gene1924;Name=YPN_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09625;old_locus_tag=YPN_1815 NC_008149.1 Protein Homology CDS 2049619 2051265 . + 0 ID=cds1865;Parent=gene1924;Dbxref=Genbank:WP_002210973.1;Name=WP_002210973.1;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210973.1;transl_table=11 NC_008149.1 RefSeq gene 2051262 2052227 . + . ID=gene1925;Name=YPN_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09630;old_locus_tag=YPN_1816 NC_008149.1 Protein Homology CDS 2051262 2052227 . + 0 ID=cds1866;Parent=gene1925;Dbxref=Genbank:WP_002210972.1;Name=WP_002210972.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210972.1;transl_table=11 NC_008149.1 RefSeq gene 2052214 2053104 . + . ID=gene1926;Name=YPN_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09635;old_locus_tag=YPN_1817 NC_008149.1 Protein Homology CDS 2052214 2053104 . + 0 ID=cds1867;Parent=gene1926;Dbxref=Genbank:WP_002210971.1;Name=WP_002210971.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002210971.1;transl_table=11 NC_008149.1 RefSeq gene 2053104 2054096 . + . ID=gene1927;Name=YPN_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09640;old_locus_tag=YPN_1818 NC_008149.1 Protein Homology CDS 2053104 2054096 . + 0 ID=cds1868;Parent=gene1927;Dbxref=Genbank:WP_002210970.1;Name=WP_002210970.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210970.1;transl_table=11 NC_008149.1 RefSeq gene 2054096 2054911 . + . ID=gene1928;Name=YPN_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09645;old_locus_tag=YPN_1819 NC_008149.1 Protein Homology CDS 2054096 2054911 . + 0 ID=cds1869;Parent=gene1928;Dbxref=Genbank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002210969.1;transl_table=11 NC_008149.1 RefSeq gene 2055301 2056581 . + . ID=gene1929;Name=YPN_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09650;old_locus_tag=YPN_1820 NC_008149.1 Protein Homology CDS 2055301 2056581 . + 0 ID=cds1870;Parent=gene1929;Dbxref=Genbank:WP_002210967.1;Name=WP_002210967.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210967.1;transl_table=11 NC_008149.1 RefSeq gene 2057224 2058729 . + . ID=gene1930;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=YPN_RS09655;old_locus_tag=YPN_1821 NC_008149.1 Protein Homology CDS 2057224 2058729 . + 0 ID=cds1871;Parent=gene1930;Dbxref=Genbank:WP_002215910.1;Name=WP_002215910.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=dipeptide and tripeptide permease A;protein_id=WP_002215910.1;transl_table=11 NC_008149.1 RefSeq gene 2058984 2059574 . + . ID=gene1931;Name=YPN_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09660;old_locus_tag=YPN_1822 NC_008149.1 Protein Homology CDS 2058984 2059574 . + 0 ID=cds1872;Parent=gene1931;Dbxref=Genbank:WP_002210965.1;Name=WP_002210965.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210965.1;transl_table=11 NC_008149.1 RefSeq gene 2059820 2060083 . + . ID=gene1932;Name=YPN_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09665;old_locus_tag=YPN_1823 NC_008149.1 Protein Homology CDS 2059820 2060083 . + 0 ID=cds1873;Parent=gene1932;Dbxref=Genbank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210964.1;transl_table=11 NC_008149.1 RefSeq gene 2060328 2060933 . + . ID=gene1933;Name=YPN_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09670;old_locus_tag=YPN_1824 NC_008149.1 Protein Homology CDS 2060328 2060933 . + 0 ID=cds1874;Parent=gene1933;Dbxref=Genbank:WP_002210962.1;Name=WP_002210962.1;gbkey=CDS;product=glutathionine S-transferase;protein_id=WP_002210962.1;transl_table=11 NC_008149.1 RefSeq gene 2060993 2061853 . - . ID=gene1934;Name=YPN_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09675;old_locus_tag=YPN_1825 NC_008149.1 Protein Homology CDS 2060993 2061853 . - 0 ID=cds1875;Parent=gene1934;Dbxref=Genbank:WP_002210961.1;Name=WP_002210961.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;product=pyridoxamine kinase;protein_id=WP_002210961.1;transl_table=11 NC_008149.1 RefSeq gene 2062008 2063282 . - . ID=gene1935;Name=YPN_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09680;old_locus_tag=YPN_1826 NC_008149.1 Protein Homology CDS 2062008 2063282 . - 0 ID=cds1876;Parent=gene1935;Dbxref=Genbank:WP_002210960.1;Name=WP_002210960.1;gbkey=CDS;product=tyrosine--tRNA ligase;protein_id=WP_002210960.1;transl_table=11 NC_008149.1 RefSeq gene 2063464 2064117 . - . ID=gene1936;Name=YPN_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09685;old_locus_tag=YPN_1827 NC_008149.1 Protein Homology CDS 2063464 2064117 . - 0 ID=cds1877;Parent=gene1936;Dbxref=Genbank:WP_002210959.1;Name=WP_002210959.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_002210959.1;transl_table=11 NC_008149.1 RefSeq gene 2064208 2064522 . - . ID=gene1937;Name=YPN_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09690;old_locus_tag=YPN_1828 NC_008149.1 Protein Homology CDS 2064208 2064522 . - 0 ID=cds1878;Parent=gene1937;Dbxref=Genbank:WP_002218323.1;Name=WP_002218323.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002218323.1;transl_table=11 NC_008149.1 RefSeq gene 2064580 2065692 . - . ID=gene1938;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=YPN_RS09695;old_locus_tag=YPN_1829 NC_008149.1 Protein Homology CDS 2064580 2065692 . - 0 ID=cds1879;Parent=gene1938;Dbxref=Genbank:WP_002218322.1;Name=WP_002218322.1;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_002218322.1;transl_table=11 NC_008149.1 RefSeq gene 2066248 2066715 . + . ID=gene1939;Name=YPN_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09700;old_locus_tag=YPN_1830 NC_008149.1 Protein Homology CDS 2066248 2066715 . + 0 ID=cds1880;Parent=gene1939;Dbxref=Genbank:WP_002210956.1;Name=WP_002210956.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210956.1;transl_table=11 NC_008149.1 RefSeq gene 2066859 2067290 . - . ID=gene1940;Name=YPN_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09705;old_locus_tag=YPN_1831 NC_008149.1 Protein Homology CDS 2066859 2067290 . - 0 ID=cds1881;Parent=gene1940;Dbxref=Genbank:WP_002210955.1;Name=WP_002210955.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=SlyA family transcriptional regulator;protein_id=WP_002210955.1;transl_table=11 NC_008149.1 RefSeq gene 2067854 2069434 . + . ID=gene1941;Name=YPN_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09710;old_locus_tag=YPN_1832 NC_008149.1 Protein Homology CDS 2067854 2069434 . + 0 ID=cds1882;Parent=gene1941;Dbxref=Genbank:WP_042468452.1;Name=WP_042468452.1;gbkey=CDS;product=hydrolase;protein_id=WP_042468452.1;transl_table=11 NC_008149.1 RefSeq gene 2069657 2070256 . + . ID=gene1942;Name=YPN_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09715;old_locus_tag=YPN_1833 NC_008149.1 Protein Homology CDS 2069657 2070256 . + 0 ID=cds1883;Parent=gene1942;Dbxref=Genbank:WP_002210951.1;Name=WP_002210951.1;Note=represses nemA which is involved in degradation of N-ethylmaleimide;gbkey=CDS;product=TetR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11 NC_008149.1 RefSeq gene 2070344 2071441 . + . ID=gene1943;Name=YPN_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09720;old_locus_tag=YPN_1834 NC_008149.1 Protein Homology CDS 2070344 2071441 . + 0 ID=cds1884;Parent=gene1943;Dbxref=Genbank:WP_002210950.1;Name=WP_002210950.1;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=WP_002210950.1;transl_table=11 NC_008149.1 RefSeq gene 2071662 2074616 . - . ID=gene1944;Name=YPN_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09725;old_locus_tag=YPN_1835 NC_008149.1 Protein Homology CDS 2071662 2074616 . - 0 ID=cds1885;Parent=gene1944;Dbxref=Genbank:WP_002210949.1;Name=WP_002210949.1;gbkey=CDS;product=toxin;protein_id=WP_002210949.1;transl_table=11 NC_008149.1 RefSeq gene 2074889 2075296 . + . ID=gene1945;Name=YPN_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09730;old_locus_tag=YPN_1836 NC_008149.1 Protein Homology CDS 2074889 2075296 . + 0 ID=cds1886;Parent=gene1945;Dbxref=Genbank:WP_002210948.1;Name=WP_002210948.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;product=lactoylglutathione lyase;protein_id=WP_002210948.1;transl_table=11 NC_008149.1 RefSeq gene 2075375 2076055 . + . ID=gene1946;Name=YPN_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09735;old_locus_tag=YPN_1837 NC_008149.1 Protein Homology CDS 2075375 2076055 . + 0 ID=cds1887;Parent=gene1946;Dbxref=Genbank:WP_002210947.1;Name=WP_002210947.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_002210947.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2076092 2076266 . + . ID=id178;gbkey=repeat_region NC_008149.1 RefSeq gene 2076364 2076714 . - . ID=gene1947;Name=YPN_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09740;old_locus_tag=YPN_1838 NC_008149.1 Protein Homology CDS 2076364 2076714 . - 0 ID=cds1888;Parent=gene1947;Dbxref=Genbank:WP_002210946.1;Name=WP_002210946.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002210946.1;transl_table=11 NC_008149.1 RefSeq gene 2076814 2077035 . - . ID=gene1948;Name=YPN_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09745 NC_008149.1 Protein Homology CDS 2076814 2077035 . - 0 ID=cds1889;Parent=gene1948;Dbxref=Genbank:WP_002216283.1;Name=WP_002216283.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216283.1;transl_table=11 NC_008149.1 RefSeq gene 2077154 2078005 . + . ID=gene1949;Name=YPN_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09750;old_locus_tag=YPN_1839 NC_008149.1 Protein Homology CDS 2077154 2078005 . + 0 ID=cds1890;Parent=gene1949;Dbxref=Genbank:WP_002210945.1;Name=WP_002210945.1;gbkey=CDS;product=hydrolase;protein_id=WP_002210945.1;transl_table=11 NC_008149.1 RefSeq gene 2078383 2078961 . + . ID=gene1950;Name=YPN_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09755;old_locus_tag=YPN_1840 NC_008149.1 Protein Homology CDS 2078383 2078961 . + 0 ID=cds1891;Parent=gene1950;Dbxref=Genbank:WP_002210944.1;Name=WP_002210944.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002210944.1;transl_table=11 NC_008149.1 RefSeq gene 2079488 2080513 . + . ID=gene1951;Name=YPN_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09760;old_locus_tag=YPN_1841 NC_008149.1 Protein Homology CDS 2079488 2080513 . + 0 ID=cds1892;Parent=gene1951;Dbxref=Genbank:WP_002210943.1;Name=WP_002210943.1;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;gbkey=CDS;product=PurR family transcriptional regulator;protein_id=WP_002210943.1;transl_table=11 NC_008149.1 RefSeq gene 2080602 2081534 . - . ID=gene1952;Name=YPN_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09765;old_locus_tag=YPN_1842 NC_008149.1 Protein Homology CDS 2080602 2081534 . - 0 ID=cds1893;Parent=gene1952;Dbxref=Genbank:WP_002210942.1;Name=WP_002210942.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210942.1;transl_table=11 NC_008149.1 RefSeq gene 2081824 2083026 . + . ID=gene1953;Name=YPN_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09770;old_locus_tag=YPN_1843 NC_008149.1 Protein Homology CDS 2081824 2083026 . + 0 ID=cds1894;Parent=gene1953;Dbxref=Genbank:WP_002210941.1;Name=WP_002210941.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002210941.1;transl_table=11 NC_008149.1 RefSeq gene 2083506 2084657 . + . ID=gene1954;Name=YPN_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09775;old_locus_tag=YPN_1844 NC_008149.1 Protein Homology CDS 2083506 2084657 . + 0 ID=cds1895;Parent=gene1954;Dbxref=Genbank:WP_002210940.1;Name=WP_002210940.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;gbkey=CDS;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002210940.1;transl_table=11 NC_008149.1 RefSeq gene 2084708 2085364 . - . ID=gene1955;Name=YPN_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09780;old_locus_tag=YPN_1845 NC_008149.1 Protein Homology CDS 2084708 2085364 . - 0 ID=cds1896;Parent=gene1955;Dbxref=Genbank:WP_002210939.1;Name=WP_002210939.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_002210939.1;transl_table=11 NC_008149.1 RefSeq gene 2085613 2086986 . + . ID=gene1956;Name=YPN_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09785;old_locus_tag=YPN_1846 NC_008149.1 Protein Homology CDS 2085613 2086986 . + 0 ID=cds1897;Parent=gene1956;Dbxref=Genbank:WP_002210937.1;Name=WP_002210937.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;product=multidrug resistance protein MdtK;protein_id=WP_002210937.1;transl_table=11 NC_008149.1 RefSeq gene 2087229 2087305 . + . ID=gene1957;Name=YPN_RS09790;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS09790;old_locus_tag=YPN_r064 NC_008149.1 tRNAscan-SE tRNA 2087229 2087305 . + . ID=rna57;Parent=gene1957;anticodon=(pos:2087263..2087265);gbkey=tRNA;product=tRNA-Val NC_008149.1 tRNAscan-SE exon 2087229 2087305 . + . ID=id179;Parent=rna57;anticodon=(pos:2087263..2087265);gbkey=tRNA;product=tRNA-Val NC_008149.1 RefSeq gene 2087365 2087441 . + . ID=gene1958;Name=YPN_RS09795;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS09795;old_locus_tag=YPN_r065 NC_008149.1 tRNAscan-SE tRNA 2087365 2087441 . + . ID=rna58;Parent=gene1958;anticodon=(pos:2087399..2087401);gbkey=tRNA;product=tRNA-Val NC_008149.1 tRNAscan-SE exon 2087365 2087441 . + . ID=id180;Parent=rna58;anticodon=(pos:2087399..2087401);gbkey=tRNA;product=tRNA-Val NC_008149.1 RefSeq gene 2088017 2089429 . + . ID=gene1959;Name=YPN_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09800;old_locus_tag=YPN_1847 NC_008149.1 Protein Homology CDS 2088017 2089429 . + 0 ID=cds1898;Parent=gene1959;Dbxref=Genbank:WP_002210936.1;Name=WP_002210936.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_002210936.1;transl_table=11 NC_008149.1 RefSeq gene 2089750 2089986 . + . ID=gene1960;Name=YPN_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09805;old_locus_tag=YPN_1848 NC_008149.1 Protein Homology CDS 2089750 2089986 . + 0 ID=cds1899;Parent=gene1960;Dbxref=Genbank:WP_002227902.1;Name=WP_002227902.1;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227902.1;transl_table=11 NC_008149.1 RefSeq gene 2090017 2090187 . + . ID=gene1961;Name=YPN_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09810 NC_008149.1 Protein Homology CDS 2090017 2090187 . + 0 ID=cds1900;Parent=gene1961;Dbxref=Genbank:WP_002430115.1;Name=WP_002430115.1;gbkey=CDS;product=invasin;protein_id=WP_002430115.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2090025 2092707 . + . ID=id181;gbkey=repeat_region NC_008149.1 RefSeq gene 2090177 2090608 . + . ID=gene1962;Name=YPN_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09815;old_locus_tag=YPN_1849 NC_008149.1 Protein Homology CDS 2090177 2090608 . + 0 ID=cds1901;Parent=gene1962;Dbxref=Genbank:WP_011566176.1;Name=WP_011566176.1;gbkey=CDS;product=transposase;protein_id=WP_011566176.1;transl_table=11 NC_008149.1 RefSeq gene 2090635 2091657 . + . ID=gene1963;Name=YPN_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09820;old_locus_tag=YPN_1850 NC_008149.1 Protein Homology CDS 2090635 2091657 . + 0 ID=cds1902;Parent=gene1963;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 2091657 2092436 . + . ID=gene1964;Name=YPN_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09825;old_locus_tag=YPN_1851 NC_008149.1 Protein Homology CDS 2091657 2092436 . + 0 ID=cds1903;Parent=gene1964;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 2093018 2094082 . - . ID=gene1965;Name=YPN_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09830;old_locus_tag=YPN_1853 NC_008149.1 Protein Homology CDS 2093018 2094082 . - 0 ID=cds1904;Parent=gene1965;Dbxref=Genbank:WP_002223648.1;Name=WP_002223648.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002223648.1;transl_table=11 NC_008149.1 RefSeq gene 2094353 2094775 . - . ID=gene1966;Name=YPN_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09835;old_locus_tag=YPN_1854 NC_008149.1 Protein Homology CDS 2094353 2094775 . - 0 ID=cds1905;Parent=gene1966;Dbxref=Genbank:WP_002211804.1;Name=WP_002211804.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desulfuration protein SufE;protein_id=WP_002211804.1;transl_table=11 NC_008149.1 RefSeq gene 2094864 2096084 . - . ID=gene1967;Name=YPN_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09840;old_locus_tag=YPN_1855 NC_008149.1 Protein Homology CDS 2094864 2096084 . - 0 ID=cds1906;Parent=gene1967;Dbxref=Genbank:WP_002211805.1;Name=WP_002211805.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_002211805.1;transl_table=11 NC_008149.1 RefSeq gene 2096081 2097406 . - . ID=gene1968;Name=YPN_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09845;old_locus_tag=YPN_1856 NC_008149.1 Protein Homology CDS 2096081 2097406 . - 0 ID=cds1907;Parent=gene1968;Dbxref=Genbank:WP_002211806.1;Name=WP_002211806.1;gbkey=CDS;product=Fe-S cluster assembly protein SufD;protein_id=WP_002211806.1;transl_table=11 NC_008149.1 RefSeq gene 2097381 2098127 . - . ID=gene1969;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=YPN_RS09850;old_locus_tag=YPN_1857 NC_008149.1 Protein Homology CDS 2097381 2098127 . - 0 ID=cds1908;Parent=gene1969;Dbxref=Genbank:WP_002211807.1;Name=WP_002211807.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_002211807.1;transl_table=11 NC_008149.1 RefSeq gene 2098313 2099824 . - . ID=gene1970;Name=YPN_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09855;old_locus_tag=YPN_1858 NC_008149.1 Protein Homology CDS 2098313 2099824 . - 0 ID=cds1909;Parent=gene1970;Dbxref=Genbank:WP_002211808.1;Name=WP_002211808.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=Fe-S cluster assembly protein SufB;protein_id=WP_002211808.1;transl_table=11 NC_008149.1 RefSeq gene 2099839 2100210 . - . ID=gene1971;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=YPN_RS09860;old_locus_tag=YPN_1859 NC_008149.1 Protein Homology CDS 2099839 2100210 . - 0 ID=cds1910;Parent=gene1971;Dbxref=Genbank:WP_002211809.1;Name=WP_002211809.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=(Fe-S)-cluster assembly protein;protein_id=WP_002211809.1;transl_table=11 NC_008149.1 RefSeq gene 2100388 2100546 . - . ID=gene1972;Name=YPN_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09865 NC_008149.1 Protein Homology CDS 2100388 2100546 . - 0 ID=cds1911;Parent=gene1972;Dbxref=Genbank:WP_002218287.1;Name=WP_002218287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218287.1;transl_table=11 NC_008149.1 RefSeq gene 2100805 2101221 . - . ID=gene1973;Name=YPN_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09870;old_locus_tag=YPN_1860 NC_008149.1 Protein Homology CDS 2100805 2101221 . - 0 ID=cds1912;Parent=gene1973;Dbxref=Genbank:WP_002211810.1;Name=WP_002211810.1;Note=required for efficient enterobactin production;gbkey=CDS;product=acyl-CoA esterase;protein_id=WP_002211810.1;transl_table=11 NC_008149.1 RefSeq gene 2101343 2104399 . - . ID=gene1974;Name=YPN_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09875;old_locus_tag=YPN_1861 NC_008149.1 Protein Homology CDS 2101343 2104399 . - 0 ID=cds1913;Parent=gene1974;Dbxref=Genbank:WP_002211811.1;Name=WP_002211811.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211811.1;transl_table=11 NC_008149.1 RefSeq gene 2105020 2106123 . + . ID=gene1975;Name=YPN_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09880;old_locus_tag=YPN_1862 NC_008149.1 Protein Homology CDS 2105020 2106123 . + 0 ID=cds1914;Parent=gene1975;Dbxref=Genbank:WP_002211812.1;Name=WP_002211812.1;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;gbkey=CDS;product=membrane protein;protein_id=WP_002211812.1;transl_table=11 NC_008149.1 RefSeq gene 2106722 2109106 . - . ID=gene1976;Name=YPN_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09885;old_locus_tag=YPN_1863 NC_008149.1 Protein Homology CDS 2106722 2109106 . - 0 ID=cds1915;Parent=gene1976;Dbxref=Genbank:WP_002211813.1;Name=WP_002211813.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11 NC_008149.1 RefSeq gene 2109443 2110264 . + . ID=gene1977;Name=YPN_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09890;old_locus_tag=YPN_1864 NC_008149.1 Protein Homology CDS 2109443 2110264 . + 0 ID=cds1916;Parent=gene1977;Dbxref=Genbank:WP_002211814.1;Name=WP_002211814.1;gbkey=CDS;product=PEP synthetase regulatory protein;protein_id=WP_002211814.1;transl_table=11 NC_008149.1 RefSeq gene 2110421 2111467 . + . ID=gene1978;Name=YPN_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09895;old_locus_tag=YPN_1865 NC_008149.1 Protein Homology CDS 2110421 2111467 . + 0 ID=cds1917;Parent=gene1978;Dbxref=Genbank:WP_002211815.1;Name=WP_002211815.1;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002211815.1;transl_table=11 NC_008149.1 RefSeq gene 2111636 2113099 . - . ID=gene1979;Name=YPN_RS09900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS09900;pseudo=true NC_008149.1 Protein Homology CDS 2111636 2113099 . - 0 ID=cds1918;Parent=gene1979;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:complement(2112377..2112379)%2Caa:Other);transl_table=11 NC_008149.1 RefSeq gene 2113151 2114167 . - . ID=gene1980;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=YPN_RS09905;old_locus_tag=YPN_1868 NC_008149.1 Protein Homology CDS 2113151 2114167 . - 0 ID=cds1919;Parent=gene1980;Dbxref=Genbank:WP_002211816.1;Name=WP_002211816.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=WP_002211816.1;transl_table=11 NC_008149.1 RefSeq gene 2114292 2114756 . - . ID=gene1981;Name=YPN_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09910;old_locus_tag=YPN_1869 NC_008149.1 Protein Homology CDS 2114292 2114756 . - 0 ID=cds1920;Parent=gene1981;Dbxref=Genbank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002216102.1;transl_table=11 NC_008149.1 RefSeq gene 2115036 2115422 . - . ID=gene1982;Name=YPN_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09915;old_locus_tag=YPN_1870 NC_008149.1 Protein Homology CDS 2115036 2115422 . - 0 ID=cds1921;Parent=gene1982;Dbxref=Genbank:WP_002211819.1;Name=WP_002211819.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002211819.1;transl_table=11 NC_008149.1 RefSeq gene 2115419 2115763 . - . ID=gene1983;Name=YPN_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09920;old_locus_tag=YPN_1871 NC_008149.1 Protein Homology CDS 2115419 2115763 . - 0 ID=cds1922;Parent=gene1983;Dbxref=Genbank:WP_002211820.1;Name=WP_002211820.1;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_002211820.1;transl_table=11 NC_008149.1 RefSeq gene 2115760 2117424 . - . ID=gene1984;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=YPN_RS09925;old_locus_tag=YPN_1872 NC_008149.1 Protein Homology CDS 2115760 2117424 . - 0 ID=cds1923;Parent=gene1984;Dbxref=Genbank:WP_002211821.1;Name=WP_002211821.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase;protein_id=WP_002211821.1;transl_table=11 NC_008149.1 RefSeq gene 2117421 2118326 . - . ID=gene1985;Name=YPN_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09930;old_locus_tag=YPN_1873 NC_008149.1 Protein Homology CDS 2117421 2118326 . - 0 ID=cds1924;Parent=gene1985;Dbxref=Genbank:WP_002211822.1;Name=WP_002211822.1;Note=catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol;gbkey=CDS;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD;protein_id=WP_002211822.1;transl_table=11 NC_008149.1 RefSeq gene 2118323 2120326 . - . ID=gene1986;Name=YPN_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09935;old_locus_tag=YPN_1874 NC_008149.1 Protein Homology CDS 2118323 2120326 . - 0 ID=cds1925;Parent=gene1986;Dbxref=Genbank:WP_002211823.1;Name=WP_002211823.1;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;gbkey=CDS;product=bifunctional polymyxin resistance protein ArnA;protein_id=WP_002211823.1;transl_table=11 NC_008149.1 RefSeq gene 2120323 2121306 . - . ID=gene1987;Name=YPN_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09940;old_locus_tag=YPN_1875 NC_008149.1 Protein Homology CDS 2120323 2121306 . - 0 ID=cds1926;Parent=gene1987;Dbxref=Genbank:WP_002211824.1;Name=WP_002211824.1;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;gbkey=CDS;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_002211824.1;transl_table=11 NC_008149.1 RefSeq gene 2121293 2122447 . - . ID=gene1988;Name=YPN_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09945;old_locus_tag=YPN_1876 NC_008149.1 Protein Homology CDS 2121293 2122447 . - 0 ID=cds1927;Parent=gene1988;Dbxref=Genbank:WP_002211825.1;Name=WP_002211825.1;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=WP_002211825.1;transl_table=11 NC_008149.1 RefSeq gene 2122797 2123555 . - . ID=gene1989;Name=YPN_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09950;old_locus_tag=YPN_1877 NC_008149.1 Protein Homology CDS 2122797 2123555 . - 0 ID=cds1928;Parent=gene1989;Dbxref=Genbank:WP_002211826.1;Name=WP_002211826.1;gbkey=CDS;product=vitamin B12 ABC transporter ATP-binding protein;protein_id=WP_002211826.1;transl_table=11 NC_008149.1 RefSeq gene 2123580 2124134 . - . ID=gene1990;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=YPN_RS09955;old_locus_tag=YPN_1878 NC_008149.1 Protein Homology CDS 2123580 2124134 . - 0 ID=cds1929;Parent=gene1990;Dbxref=Genbank:WP_002211827.1;Name=WP_002211827.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11 NC_008149.1 RefSeq gene 2124204 2125211 . - . ID=gene1991;Name=YPN_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09960;old_locus_tag=YPN_1879 NC_008149.1 Protein Homology CDS 2124204 2125211 . - 0 ID=cds1930;Parent=gene1991;Dbxref=Genbank:WP_002220283.1;Name=WP_002220283.1;gbkey=CDS;product=vitamin B12 import system permease BtuC;protein_id=WP_002220283.1;transl_table=11 NC_008149.1 RefSeq gene 2125438 2125896 . - . ID=gene1992;Name=YPN_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09965;old_locus_tag=YPN_1880 NC_008149.1 Protein Homology CDS 2125438 2125896 . - 0 ID=cds1931;Parent=gene1992;Dbxref=Genbank:WP_002211829.1;Name=WP_002211829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211829.1;transl_table=11 NC_008149.1 RefSeq gene 2126230 2126526 . - . ID=gene1993;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=YPN_RS09970;old_locus_tag=YPN_1881 NC_008149.1 Protein Homology CDS 2126230 2126526 . - 0 ID=cds1932;Parent=gene1993;Dbxref=Genbank:WP_002211830.1;Name=WP_002211830.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11 NC_008149.1 RefSeq gene 2126531 2128918 . - . ID=gene1994;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=YPN_RS09975;old_locus_tag=YPN_1882 NC_008149.1 Protein Homology CDS 2126531 2128918 . - 0 ID=cds1933;Parent=gene1994;Dbxref=Genbank:WP_002211831.1;Name=WP_002211831.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_002211831.1;transl_table=11 NC_008149.1 RefSeq gene 2128932 2129915 . - . ID=gene1995;Name=YPN_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09980;old_locus_tag=YPN_1883 NC_008149.1 Protein Homology CDS 2128932 2129915 . - 0 ID=cds1934;Parent=gene1995;Dbxref=Genbank:WP_002211832.1;Name=WP_002211832.1;gbkey=CDS;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_002211832.1;transl_table=11 NC_008149.1 RefSeq gene 2130414 2130770 . - . ID=gene1996;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=YPN_RS09985;old_locus_tag=YPN_1885 NC_008149.1 Protein Homology CDS 2130414 2130770 . - 0 ID=cds1935;Parent=gene1996;Dbxref=Genbank:WP_002211833.1;Name=WP_002211833.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11 NC_008149.1 RefSeq gene 2130808 2131005 . - . ID=gene1997;Name=YPN_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09990;old_locus_tag=YPN_1886 NC_008149.1 Protein Homology CDS 2130808 2131005 . - 0 ID=cds1936;Parent=gene1997;Dbxref=Genbank:WP_002211834.1;Name=WP_002211834.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11 NC_008149.1 RefSeq gene 2131102 2131452 . - . ID=gene1998;Name=YPN_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS09995;old_locus_tag=YPN_1887 NC_008149.1 Protein Homology CDS 2131102 2131452 . - 0 ID=cds1937;Parent=gene1998;Dbxref=Genbank:WP_002211835.1;Name=WP_002211835.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_002211835.1;transl_table=11 NC_008149.1 RefSeq gene 2131657 2133585 . - . ID=gene1999;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=YPN_RS10000;old_locus_tag=YPN_1888 NC_008149.1 Protein Homology CDS 2131657 2133585 . - 0 ID=cds1938;Parent=gene1999;Dbxref=Genbank:WP_002211836.1;Name=WP_002211836.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11 NC_008149.1 RefSeq gene 2133976 2134188 . + . ID=gene2000;Name=YPN_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10005;old_locus_tag=YPN_1889 NC_008149.1 Protein Homology CDS 2133976 2134188 . + 0 ID=cds1939;Parent=gene2000;Dbxref=Genbank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216696.1;transl_table=11 NC_008149.1 RefSeq gene 2134498 2134875 . + . ID=gene2001;Name=YPN_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10010 NC_008149.1 Protein Homology CDS 2134498 2134875 . + 0 ID=cds1940;Parent=gene2001;Dbxref=Genbank:WP_002216692.1;Name=WP_002216692.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216692.1;transl_table=11 NC_008149.1 RefSeq gene 2134947 2135198 . - . ID=gene2002;Name=YPN_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10015;old_locus_tag=YPN_1890 NC_008149.1 Protein Homology CDS 2134947 2135198 . - 0 ID=cds1941;Parent=gene2002;Dbxref=Genbank:WP_002211839.1;Name=WP_002211839.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211839.1;transl_table=11 NC_008149.1 RefSeq gene 2135517 2136200 . + . ID=gene2003;Name=YPN_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10020;old_locus_tag=YPN_1891 NC_008149.1 Protein Homology CDS 2135517 2136200 . + 0 ID=cds1942;Parent=gene2003;Dbxref=Genbank:WP_002211840.1;Name=WP_002211840.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211840.1;transl_table=11 NC_008149.1 RefSeq gene 2136322 2136984 . - . ID=gene2004;Name=YPN_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10025;old_locus_tag=YPN_1892 NC_008149.1 Protein Homology CDS 2136322 2136984 . - 0 ID=cds1943;Parent=gene2004;Dbxref=Genbank:WP_002216686.1;Name=WP_002216686.1;gbkey=CDS;product=lytic transglycosylase;protein_id=WP_002216686.1;transl_table=11 NC_008149.1 RefSeq gene 2137196 2138164 . + . ID=gene2005;Name=YPN_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10030;old_locus_tag=YPN_1893 NC_008149.1 Protein Homology CDS 2137196 2138164 . + 0 ID=cds1944;Parent=gene2005;Dbxref=Genbank:WP_002211842.1;Name=WP_002211842.1;gbkey=CDS;product=iron-binding protein;protein_id=WP_002211842.1;transl_table=11 NC_008149.1 RefSeq gene 2138161 2139051 . + . ID=gene2006;Name=YPN_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10035;old_locus_tag=YPN_1894 NC_008149.1 Protein Homology CDS 2138161 2139051 . + 0 ID=cds1945;Parent=gene2006;Dbxref=Genbank:WP_002211843.1;Name=WP_002211843.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeB;protein_id=WP_002211843.1;transl_table=11 NC_008149.1 RefSeq gene 2139051 2139935 . + . ID=gene2007;Name=YPN_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10040;old_locus_tag=YPN_1895 NC_008149.1 Protein Homology CDS 2139051 2139935 . + 0 ID=cds1946;Parent=gene2007;Dbxref=Genbank:WP_002211844.1;Name=WP_002211844.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeC;protein_id=WP_002211844.1;transl_table=11 NC_008149.1 RefSeq gene 2139932 2140825 . + . ID=gene2008;Name=YPN_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10045;old_locus_tag=YPN_1896 NC_008149.1 Protein Homology CDS 2139932 2140825 . + 0 ID=cds1947;Parent=gene2008;Dbxref=Genbank:WP_002211845.1;Name=WP_002211845.1;gbkey=CDS;product=chelated iron transport system membrane protein YfeD;protein_id=WP_002211845.1;transl_table=11 NC_008149.1 RefSeq gene 2140893 2141105 . + . ID=gene2009;Name=YPN_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10050;old_locus_tag=YPN_1897 NC_008149.1 Protein Homology CDS 2140893 2141105 . + 0 ID=cds1948;Parent=gene2009;Dbxref=Genbank:WP_002216683.1;Name=WP_002216683.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216683.1;transl_table=11 NC_008149.1 RefSeq gene 2141130 2142005 . + . ID=gene2010;Name=YPN_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10055;old_locus_tag=YPN_1898 NC_008149.1 Protein Homology CDS 2141130 2142005 . + 0 ID=cds1949;Parent=gene2010;Dbxref=Genbank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211846.1;transl_table=11 NC_008149.1 RefSeq gene 2142134 2142688 . - . ID=gene2011;Name=YPN_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10060;old_locus_tag=YPN_1899 NC_008149.1 Protein Homology CDS 2142134 2142688 . - 0 ID=cds1950;Parent=gene2011;Dbxref=Genbank:WP_002211847.1;Name=WP_002211847.1;gbkey=CDS;product=yfeABCD regulator yfeE;protein_id=WP_002211847.1;transl_table=11 NC_008149.1 RefSeq gene 2143099 2143764 . + . ID=gene2012;Name=YPN_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10065;old_locus_tag=YPN_1900 NC_008149.1 Protein Homology CDS 2143099 2143764 . + 0 ID=cds1951;Parent=gene2012;Dbxref=Genbank:WP_002220277.1;Name=WP_002220277.1;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=WP_002220277.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2143978 2146621 . + . ID=id182;gbkey=repeat_region NC_008149.1 RefSeq gene 2144015 2145223 . - . ID=gene2013;Name=YPN_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10070;old_locus_tag=YPN_1901 NC_008149.1 Protein Homology CDS 2144015 2145223 . - 0 ID=cds1952;Parent=gene2013;Dbxref=Genbank:WP_011566177.1;Name=WP_011566177.1;gbkey=CDS;product=transposase;protein_id=WP_011566177.1;transl_table=11 NC_008149.1 RefSeq gene 2145270 2146343 . + . ID=gene2014;Name=YPN_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10075;old_locus_tag=YPN_1902 NC_008149.1 Protein Homology CDS 2145270 2146343 . + 0 ID=cds1953;Parent=gene2014;Dbxref=Genbank:WP_042672817.1;Name=WP_042672817.1;gbkey=CDS;product=transposase;protein_id=WP_042672817.1;transl_table=11 NC_008149.1 RefSeq gene 2146355 2146546 . - . ID=gene2015;Name=YPN_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10080;old_locus_tag=YPN_1903 NC_008149.1 Protein Homology CDS 2146355 2146546 . - 0 ID=cds1954;Parent=gene2015;Dbxref=Genbank:WP_002228487.1;Name=WP_002228487.1;gbkey=CDS;product=transposase;protein_id=WP_002228487.1;transl_table=11 NC_008149.1 RefSeq gene 2146594 2146944 . - . ID=gene2016;Name=YPN_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10085;old_locus_tag=YPN_1904 NC_008149.1 Protein Homology CDS 2146594 2146944 . - 0 ID=cds1955;Parent=gene2016;Dbxref=Genbank:WP_002210828.1;Name=WP_002210828.1;gbkey=CDS;product=pectin degradation protein kdgF;protein_id=WP_002210828.1;transl_table=11 NC_008149.1 RefSeq gene 2147280 2148116 . + . ID=gene2017;Name=YPN_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10090;old_locus_tag=YPN_1905 NC_008149.1 Protein Homology CDS 2147280 2148116 . + 0 ID=cds1956;Parent=gene2017;Dbxref=Genbank:WP_002210829.1;Name=WP_002210829.1;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;gbkey=CDS;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=WP_002210829.1;transl_table=11 NC_008149.1 RefSeq gene 2148208 2148969 . + . ID=gene2018;Name=YPN_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10095;old_locus_tag=YPN_1906 NC_008149.1 Protein Homology CDS 2148208 2148969 . + 0 ID=cds1957;Parent=gene2018;Dbxref=Genbank:WP_002210830.1;Name=WP_002210830.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002210830.1;transl_table=11 NC_008149.1 RefSeq gene 2149305 2150972 . + . ID=gene2019;Name=YPN_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10100;old_locus_tag=YPN_1907 NC_008149.1 Protein Homology CDS 2149305 2150972 . + 0 ID=cds1958;Parent=gene2019;Dbxref=Genbank:WP_002210831.1;Name=WP_002210831.1;gbkey=CDS;product=pectate disaccharide-lyase;protein_id=WP_002210831.1;transl_table=11 NC_008149.1 RefSeq gene 2151013 2151903 . + . ID=gene2020;Name=YPN_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10105;old_locus_tag=YPN_1908 NC_008149.1 Protein Homology CDS 2151013 2151903 . + 0 ID=cds1959;Parent=gene2020;Dbxref=Genbank:WP_002210832.1;Name=WP_002210832.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210832.1;transl_table=11 NC_008149.1 RefSeq gene 2151896 2152816 . + . ID=gene2021;Name=YPN_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10110;old_locus_tag=YPN_1909 NC_008149.1 Protein Homology CDS 2151896 2152816 . + 0 ID=cds1960;Parent=gene2021;Dbxref=Genbank:WP_002210833.1;Name=WP_002210833.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210833.1;transl_table=11 NC_008149.1 RefSeq gene 2152830 2153957 . + . ID=gene2022;Name=YPN_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10115;old_locus_tag=YPN_1910 NC_008149.1 Protein Homology CDS 2152830 2153957 . + 0 ID=cds1961;Parent=gene2022;Dbxref=Genbank:WP_002210834.1;Name=WP_002210834.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11 NC_008149.1 RefSeq gene 2153973 2155265 . + . ID=gene2023;Name=YPN_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10120;old_locus_tag=YPN_1911 NC_008149.1 Protein Homology CDS 2153973 2155265 . + 0 ID=cds1962;Parent=gene2023;Dbxref=Genbank:WP_002210835.1;Name=WP_002210835.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210835.1;transl_table=11 NC_008149.1 RefSeq gene 2155563 2156273 . + . ID=gene2024;Name=YPN_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10125;old_locus_tag=YPN_1912 NC_008149.1 Protein Homology CDS 2155563 2156273 . + 0 ID=cds1963;Parent=gene2024;Dbxref=Genbank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;product=porin;protein_id=WP_002210836.1;transl_table=11 NC_008149.1 RefSeq gene 2156753 2157301 . + . ID=gene2025;Name=YPN_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10130;old_locus_tag=YPN_1913 NC_008149.1 Protein Homology CDS 2156753 2157301 . + 0 ID=cds1964;Parent=gene2025;Dbxref=Genbank:WP_002210837.1;Name=WP_002210837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210837.1;transl_table=11 NC_008149.1 RefSeq gene 2157505 2158896 . + . ID=gene2026;Name=YPN_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10135;old_locus_tag=YPN_1914 NC_008149.1 Protein Homology CDS 2157505 2158896 . + 0 ID=cds1965;Parent=gene2026;Dbxref=Genbank:WP_002210838.1;Name=WP_002210838.1;gbkey=CDS;product=L-cystine transporter tcyP;protein_id=WP_002210838.1;transl_table=11 NC_008149.1 RefSeq gene 2159111 2159962 . - . ID=gene2027;Name=YPN_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10140;old_locus_tag=YPN_1915 NC_008149.1 Protein Homology CDS 2159111 2159962 . - 0 ID=cds1966;Parent=gene2027;Dbxref=Genbank:WP_002210839.1;Name=WP_002210839.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210839.1;transl_table=11 NC_008149.1 RefSeq gene 2160365 2161156 . - . ID=gene2028;Name=YPN_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10145;old_locus_tag=YPN_1916 NC_008149.1 Protein Homology CDS 2160365 2161156 . - 0 ID=cds1967;Parent=gene2028;Dbxref=Genbank:WP_002210840.1;Name=WP_002210840.1;Note=regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=WP_002210840.1;transl_table=11 NC_008149.1 RefSeq gene 2161343 2162509 . - . ID=gene2029;Name=YPN_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10150;old_locus_tag=YPN_1917 NC_008149.1 Protein Homology CDS 2161343 2162509 . - 0 ID=cds1968;Parent=gene2029;Dbxref=Genbank:WP_002210841.1;Name=WP_002210841.1;gbkey=CDS;product=oligogalacturonate lyase;protein_id=WP_002210841.1;transl_table=11 NC_008149.1 RefSeq gene 2162836 2164203 . + . ID=gene2030;Name=YPN_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10155;old_locus_tag=YPN_1918 NC_008149.1 Protein Homology CDS 2162836 2164203 . + 0 ID=cds1969;Parent=gene2030;Dbxref=Genbank:WP_002210842.1;Name=WP_002210842.1;gbkey=CDS;product=multidrug MFS transporter;protein_id=WP_002210842.1;transl_table=11 NC_008149.1 RefSeq gene 2164257 2165060 . - . ID=gene2031;Name=YPN_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10160;old_locus_tag=YPN_1919 NC_008149.1 Protein Homology CDS 2164257 2165060 . - 0 ID=cds1970;Parent=gene2031;Dbxref=Genbank:WP_002210843.1;Name=WP_002210843.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210843.1;transl_table=11 NC_008149.1 RefSeq gene 2165057 2166220 . - . ID=gene2032;Name=YPN_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10165;old_locus_tag=YPN_1920 NC_008149.1 Protein Homology CDS 2165057 2166220 . - 0 ID=cds1971;Parent=gene2032;Dbxref=Genbank:WP_002215120.1;Name=WP_002215120.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002215120.1;transl_table=11 NC_008149.1 RefSeq gene 2166217 2168829 . - . ID=gene2033;Name=YPN_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10170;old_locus_tag=YPN_1921 NC_008149.1 Protein Homology CDS 2166217 2168829 . - 0 ID=cds1972;Parent=gene2033;Dbxref=Genbank:WP_002228489.1;Name=WP_002228489.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002228489.1;transl_table=11 NC_008149.1 RefSeq gene 2168911 2169597 . - . ID=gene2034;Name=YPN_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10175;old_locus_tag=YPN_1922 NC_008149.1 Protein Homology CDS 2168911 2169597 . - 0 ID=cds1973;Parent=gene2034;Dbxref=Genbank:WP_002354110.1;Name=WP_002354110.1;gbkey=CDS;product=fimbrial assembly protein StbE;protein_id=WP_002354110.1;transl_table=11 NC_008149.1 RefSeq gene 2169843 2170385 . - . ID=gene2035;Name=YPN_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10180;old_locus_tag=YPN_1923 NC_008149.1 Protein Homology CDS 2169843 2170385 . - 0 ID=cds1974;Parent=gene2035;Dbxref=Genbank:WP_002210846.1;Name=WP_002210846.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002210846.1;transl_table=11 NC_008149.1 RefSeq gene 2171043 2171924 . - . ID=gene2036;Name=YPN_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10185;old_locus_tag=YPN_1924 NC_008149.1 Protein Homology CDS 2171043 2171924 . - 0 ID=cds1975;Parent=gene2036;Dbxref=Genbank:WP_002210847.1;Name=WP_002210847.1;Note=metalloprotease;gbkey=CDS;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11 NC_008149.1 RefSeq gene 2172398 2174470 . - . ID=gene2037;Name=YPN_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10190;old_locus_tag=YPN_1925 NC_008149.1 Protein Homology CDS 2172398 2174470 . - 0 ID=cds1976;Parent=gene2037;Dbxref=Genbank:WP_002210848.1;Name=WP_002210848.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;product=carboxyl-terminal processing protease;protein_id=WP_002210848.1;transl_table=11 NC_008149.1 RefSeq gene 2174490 2175203 . - . ID=gene2038;Name=YPN_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10195;old_locus_tag=YPN_1926 NC_008149.1 Protein Homology CDS 2174490 2175203 . - 0 ID=cds1977;Parent=gene2038;Dbxref=Genbank:WP_002210849.1;Name=WP_002210849.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11 NC_008149.1 RefSeq gene 2175299 2175796 . - . ID=gene2039;Name=YPN_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10200;old_locus_tag=YPN_1927 NC_008149.1 Protein Homology CDS 2175299 2175796 . - 0 ID=cds1978;Parent=gene2039;Dbxref=Genbank:WP_002210850.1;Name=WP_002210850.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002210850.1;transl_table=11 NC_008149.1 RefSeq gene 2176028 2177275 . + . ID=gene2040;Name=YPN_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10205;old_locus_tag=YPN_1928 NC_008149.1 Protein Homology CDS 2176028 2177275 . + 0 ID=cds1979;Parent=gene2040;Dbxref=Genbank:WP_002367629.1;Name=WP_002367629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002367629.1;transl_table=11 NC_008149.1 RefSeq gene 2177244 2179895 . + . ID=gene2041;Name=YPN_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10210;old_locus_tag=YPN_1929 NC_008149.1 Protein Homology CDS 2177244 2179895 . + 0 ID=cds1980;Parent=gene2041;Dbxref=Genbank:WP_002216616.1;Name=WP_002216616.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216616.1;transl_table=11 NC_008149.1 RefSeq gene 2180374 2180928 . + . ID=gene2042;Name=YPN_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10215;old_locus_tag=YPN_1930 NC_008149.1 Protein Homology CDS 2180374 2180928 . + 0 ID=cds1981;Parent=gene2042;Dbxref=Genbank:WP_002210852.1;Name=WP_002210852.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210852.1;transl_table=11 NC_008149.1 RefSeq gene 2180973 2181464 . + . ID=gene2043;Name=YPN_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10220;old_locus_tag=YPN_1931 NC_008149.1 Protein Homology CDS 2180973 2181464 . + 0 ID=cds1982;Parent=gene2043;Dbxref=Genbank:WP_002210853.1;Name=WP_002210853.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210853.1;transl_table=11 NC_008149.1 RefSeq gene 2181485 2182042 . + . ID=gene2044;Name=YPN_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10225;old_locus_tag=YPN_1932 NC_008149.1 Protein Homology CDS 2181485 2182042 . + 0 ID=cds1983;Parent=gene2044;Dbxref=Genbank:WP_002216611.1;Name=WP_002216611.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002216611.1;transl_table=11 NC_008149.1 RefSeq gene 2182073 2182825 . + . ID=gene2045;Name=YPN_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10230;old_locus_tag=YPN_1933 NC_008149.1 Protein Homology CDS 2182073 2182825 . + 0 ID=cds1984;Parent=gene2045;Dbxref=Genbank:WP_002210856.1;Name=WP_002210856.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_002210856.1;transl_table=11 NC_008149.1 RefSeq gene 2183013 2185460 . + . ID=gene2046;Name=YPN_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10235;old_locus_tag=YPN_1934 NC_008149.1 Protein Homology CDS 2183013 2185460 . + 0 ID=cds1985;Parent=gene2046;Dbxref=Genbank:WP_002210857.1;Name=WP_002210857.1;gbkey=CDS;product=outer membrane usher protein;protein_id=WP_002210857.1;transl_table=11 NC_008149.1 RefSeq gene 2185666 2186655 . + . ID=gene2047;Name=YPN_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10240;old_locus_tag=YPN_1935 NC_008149.1 Protein Homology CDS 2185666 2186655 . + 0 ID=cds1986;Parent=gene2047;Dbxref=Genbank:WP_002210858.1;Name=WP_002210858.1;gbkey=CDS;product=spore coat protein U;protein_id=WP_002210858.1;transl_table=11 NC_008149.1 RefSeq gene 2186863 2187102 . + . ID=gene2048;Name=YPN_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10245;old_locus_tag=YPN_1936 NC_008149.1 Protein Homology CDS 2186863 2187102 . + 0 ID=cds1987;Parent=gene2048;Dbxref=Genbank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210859.1;transl_table=11 NC_008149.1 RefSeq gene 2187212 2187601 . - . ID=gene2049;Name=YPN_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10250;old_locus_tag=YPN_1937 NC_008149.1 Protein Homology CDS 2187212 2187601 . - 0 ID=cds1988;Parent=gene2049;Dbxref=Genbank:WP_002215943.1;Name=WP_002215943.1;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002215943.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2187920 2189878 . + . ID=id183;gbkey=repeat_region NC_008149.1 RefSeq gene 2188008 2189030 . + . ID=gene2050;Name=YPN_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10255;old_locus_tag=YPN_1939 NC_008149.1 Protein Homology CDS 2188008 2189030 . + 0 ID=cds1989;Parent=gene2050;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 2189030 2189809 . + . ID=gene2051;Name=YPN_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10260;old_locus_tag=YPN_1940 NC_008149.1 Protein Homology CDS 2189030 2189809 . + 0 ID=cds1990;Parent=gene2051;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 2190372 2190605 . - . ID=gene2052;Name=YPN_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10265;old_locus_tag=YPN_1941 NC_008149.1 Protein Homology CDS 2190372 2190605 . - 0 ID=cds1991;Parent=gene2052;Dbxref=Genbank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210862.1;transl_table=11 NC_008149.1 RefSeq gene 2190760 2192016 . - . ID=gene2053;Name=YPN_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10270;old_locus_tag=YPN_1942 NC_008149.1 Protein Homology CDS 2190760 2192016 . - 0 ID=cds1992;Parent=gene2053;Dbxref=Genbank:WP_002210864.1;Name=WP_002210864.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210864.1;transl_table=11 NC_008149.1 RefSeq gene 2192409 2192657 . - . ID=gene2054;Name=YPN_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10275;old_locus_tag=YPN_1943 NC_008149.1 Protein Homology CDS 2192409 2192657 . - 0 ID=cds1993;Parent=gene2054;Dbxref=Genbank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11 NC_008149.1 RefSeq gene 2193222 2193416 . + . ID=gene2055;Name=YPN_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10280 NC_008149.1 Protein Homology CDS 2193222 2193416 . + 0 ID=cds1994;Parent=gene2055;Dbxref=Genbank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11 NC_008149.1 RefSeq gene 2193818 2195047 . + . ID=gene2056;Name=YPN_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10285;old_locus_tag=YPN_1944 NC_008149.1 Protein Homology CDS 2193818 2195047 . + 0 ID=cds1995;Parent=gene2056;Dbxref=Genbank:WP_002210868.1;Name=WP_002210868.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;product=alanine racemase;protein_id=WP_002210868.1;transl_table=11 NC_008149.1 RefSeq gene 2195666 2196619 . - . ID=gene2057;Name=YPN_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10290;old_locus_tag=YPN_1945 NC_008149.1 Protein Homology CDS 2195666 2196619 . - 0 ID=cds1996;Parent=gene2057;Dbxref=Genbank:WP_002210869.1;Name=WP_002210869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210869.1;transl_table=11 NC_008149.1 RefSeq gene 2196719 2197153 . - . ID=gene2058;Name=YPN_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10295;old_locus_tag=YPN_1946 NC_008149.1 Protein Homology CDS 2196719 2197153 . - 0 ID=cds1997;Parent=gene2058;Dbxref=Genbank:WP_002215939.1;Name=WP_002215939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215939.1;transl_table=11 NC_008149.1 RefSeq gene 2197140 2199234 . - . ID=gene2059;Name=YPN_RS10300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS10300;old_locus_tag=YPN_1947;pseudo=true NC_008149.1 Protein Homology CDS 2197140 2199234 . - 0 ID=cds1998;Parent=gene2059;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cell surface protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2199708 2200472 . - . ID=gene2060;Name=YPN_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10305;old_locus_tag=YPN_1948 NC_008149.1 Protein Homology CDS 2199708 2200472 . - 0 ID=cds1999;Parent=gene2060;Dbxref=Genbank:WP_002210870.1;Name=WP_002210870.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210870.1;transl_table=11 NC_008149.1 RefSeq gene 2200604 2200723 . + . ID=gene2061;Name=YPN_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10310;old_locus_tag=YPN_1949 NC_008149.1 Protein Homology CDS 2200604 2200723 . + 0 ID=cds2000;Parent=gene2061;Dbxref=Genbank:WP_002210871.1;Name=WP_002210871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210871.1;transl_table=11 NC_008149.1 RefSeq gene 2201043 2201687 . - . ID=gene2062;Name=YPN_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10315;old_locus_tag=YPN_1950 NC_008149.1 Protein Homology CDS 2201043 2201687 . - 0 ID=cds2001;Parent=gene2062;Dbxref=Genbank:WP_002210872.1;Name=WP_002210872.1;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;gbkey=CDS;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11 NC_008149.1 RefSeq gene 2201697 2202086 . - . ID=gene2063;Name=YPN_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10320;old_locus_tag=YPN_1951 NC_008149.1 Protein Homology CDS 2201697 2202086 . - 0 ID=cds2002;Parent=gene2063;Dbxref=Genbank:WP_002210873.1;Name=WP_002210873.1;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;gbkey=CDS;product=chemotaxis protein CheY;protein_id=WP_002210873.1;transl_table=11 NC_008149.1 RefSeq gene 2202187 2203236 . - . ID=gene2064;Name=YPN_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10325;old_locus_tag=YPN_1952 NC_008149.1 Protein Homology CDS 2202187 2203236 . - 0 ID=cds2003;Parent=gene2064;Dbxref=Genbank:WP_002210874.1;Name=WP_002210874.1;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;gbkey=CDS;product=two-component system protein-glutamate methylesterase response regulator;protein_id=WP_002210874.1;transl_table=11 NC_008149.1 RefSeq gene 2203236 2204108 . - . ID=gene2065;Name=YPN_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10330;old_locus_tag=YPN_1953 NC_008149.1 Protein Homology CDS 2203236 2204108 . - 0 ID=cds2004;Parent=gene2065;Dbxref=Genbank:WP_002214065.1;Name=WP_002214065.1;Note=methylates the MCP;gbkey=CDS;product=chemotaxis protein CheR;protein_id=WP_002214065.1;transl_table=11 NC_008149.1 RefSeq gene 2204281 2205891 . - . ID=gene2066;Name=YPN_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10335;old_locus_tag=YPN_1954 NC_008149.1 Protein Homology CDS 2204281 2205891 . - 0 ID=cds2005;Parent=gene2066;Dbxref=Genbank:WP_002220817.1;Name=WP_002220817.1;Note=mediates taxis toward dipeptides;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002220817.1;transl_table=11 NC_008149.1 RefSeq gene 2206075 2207748 . - . ID=gene2067;Name=YPN_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10340;old_locus_tag=YPN_1955 NC_008149.1 Protein Homology CDS 2206075 2207748 . - 0 ID=cds2006;Parent=gene2067;Dbxref=Genbank:WP_002210876.1;Name=WP_002210876.1;Note=serine sensor receptor;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210876.1;transl_table=11 NC_008149.1 RefSeq gene 2207989 2208690 . - . ID=gene2068;Name=YPN_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10345;old_locus_tag=YPN_1956 NC_008149.1 Protein Homology CDS 2207989 2208690 . - 0 ID=cds2007;Parent=gene2068;Dbxref=Genbank:WP_002214064.1;Name=WP_002214064.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214064.1;transl_table=11 NC_008149.1 RefSeq gene 2208759 2211635 . - . ID=gene2069;Name=YPN_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10350;old_locus_tag=YPN_1957 NC_008149.1 Protein Homology CDS 2208759 2211635 . - 0 ID=cds2008;Parent=gene2069;Dbxref=Genbank:WP_002210878.1;Name=WP_002210878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210878.1;transl_table=11 NC_008149.1 RefSeq gene 2212163 2215969 . - . ID=gene2070;Name=YPN_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10355;old_locus_tag=YPN_1958 NC_008149.1 Protein Homology CDS 2212163 2215969 . - 0 ID=cds2009;Parent=gene2070;Dbxref=Genbank:WP_002224033.1;Name=WP_002224033.1;gbkey=CDS;product=autotransporter;protein_id=WP_002224033.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2212163 2214293 . + . ID=id184;gbkey=repeat_region NC_008149.1 RefSeq gene 2216444 2217109 . - . ID=gene2071;Name=YPN_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10360;old_locus_tag=YPN_1959 NC_008149.1 Protein Homology CDS 2216444 2217109 . - 0 ID=cds2010;Parent=gene2071;Dbxref=Genbank:WP_002210881.1;Name=WP_002210881.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210881.1;transl_table=11 NC_008149.1 RefSeq gene 2217299 2218285 . + . ID=gene2072;Name=YPN_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10365;old_locus_tag=YPN_1960 NC_008149.1 Protein Homology CDS 2217299 2218285 . + 0 ID=cds2011;Parent=gene2072;Dbxref=Genbank:WP_002210882.1;Name=WP_002210882.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210882.1;transl_table=11 NC_008149.1 RefSeq gene 2218282 2218659 . + . ID=gene2073;Name=YPN_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10370;old_locus_tag=YPN_1961 NC_008149.1 Protein Homology CDS 2218282 2218659 . + 0 ID=cds2012;Parent=gene2073;Dbxref=Genbank:WP_002210883.1;Name=WP_002210883.1;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=WP_002210883.1;transl_table=11 NC_008149.1 RefSeq gene 2218672 2219907 . + . ID=gene2074;Name=YPN_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10375;old_locus_tag=YPN_1962 NC_008149.1 Protein Homology CDS 2218672 2219907 . + 0 ID=cds2013;Parent=gene2074;Dbxref=Genbank:WP_002210884.1;Name=WP_002210884.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210884.1;transl_table=11 NC_008149.1 RefSeq gene 2220199 2220696 . - . ID=gene2075;Name=YPN_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10380;old_locus_tag=YPN_1963 NC_008149.1 Protein Homology CDS 2220199 2220696 . - 0 ID=cds2014;Parent=gene2075;Dbxref=Genbank:WP_002210885.1;Name=WP_002210885.1;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=WP_002210885.1;transl_table=11 NC_008149.1 RefSeq gene 2220859 2223024 . - . ID=gene2076;Name=YPN_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10385;old_locus_tag=YPN_1964 NC_008149.1 Protein Homology CDS 2220859 2223024 . - 0 ID=cds2015;Parent=gene2076;Dbxref=Genbank:WP_002210886.1;Name=WP_002210886.1;gbkey=CDS;product=chemotaxis protein CheA;protein_id=WP_002210886.1;transl_table=11 NC_008149.1 RefSeq gene 2223377 2224324 . - . ID=gene2077;Name=YPN_RS10390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS10390;old_locus_tag=YPN_1965;partial=true;pseudo=true;start_range=.,2223377 NC_008149.1 Protein Homology CDS 2223377 2224324 . - 0 ID=cds2016;Parent=gene2077;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2223377;transl_table=11 NC_008149.1 RefSeq gene 2224321 2225208 . - . ID=gene2078;Name=YPN_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10395;old_locus_tag=YPN_1966 NC_008149.1 Protein Homology CDS 2224321 2225208 . - 0 ID=cds2017;Parent=gene2078;Dbxref=Genbank:WP_002210888.1;Name=WP_002210888.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;product=flagellar motor protein MotA;protein_id=WP_002210888.1;transl_table=11 NC_008149.1 RefSeq gene 2225413 2225994 . - . ID=gene2079;Name=YPN_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10400;old_locus_tag=YPN_1967 NC_008149.1 Protein Homology CDS 2225413 2225994 . - 0 ID=cds2018;Parent=gene2079;Dbxref=Genbank:WP_002210889.1;Name=WP_002210889.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210889.1;transl_table=11 NC_008149.1 RefSeq gene 2225998 2226349 . - . ID=gene2080;Name=YPN_RS10405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS10405;old_locus_tag=YPN_1968;pseudo=true NC_008149.1 Protein Homology CDS 2225998 2226349 . - 0 ID=cds2019;Parent=gene2080;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transcriptional regulator;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2227537 2230236 . - . ID=gene2081;Name=YPN_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10410;old_locus_tag=YPN_1969 NC_008149.1 Protein Homology CDS 2227537 2230236 . - 0 ID=cds2020;Parent=gene2081;Dbxref=Genbank:WP_002210890.1;Name=WP_002210890.1;Note=P-type%3B involved in magnesium transport into the cytoplasm;gbkey=CDS;product=magnesium-translocating P-type ATPase;protein_id=WP_002210890.1;transl_table=11 NC_008149.1 RefSeq gene 2230637 2231335 . - . ID=gene2082;Name=YPN_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10415;old_locus_tag=YPN_1970 NC_008149.1 Protein Homology CDS 2230637 2231335 . - 0 ID=cds2021;Parent=gene2082;Dbxref=Genbank:WP_002210891.1;Name=WP_002210891.1;gbkey=CDS;product=magnesium transporter;protein_id=WP_002210891.1;transl_table=11 NC_008149.1 RefSeq gene 2231687 2231857 . - . ID=gene2083;Name=YPN_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10420 NC_008149.1 Protein Homology CDS 2231687 2231857 . - 0 ID=cds2022;Parent=gene2083;Dbxref=Genbank:WP_002214053.1;Name=WP_002214053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214053.1;transl_table=11 NC_008149.1 RefSeq gene 2232494 2234195 . + . ID=gene2084;Name=YPN_RS10425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS10425;old_locus_tag=YPN_1971;pseudo=true NC_008149.1 Protein Homology CDS 2232494 2234195 . + 0 ID=cds2023;Parent=gene2084;exception=annotated by transcript or proteomic data;gbkey=CDS;product=chemotaxis protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2234378 2234569 . - . ID=gene2085;Name=YPN_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10430;old_locus_tag=YPN_1973 NC_008149.1 Protein Homology CDS 2234378 2234569 . - 0 ID=cds2024;Parent=gene2085;Dbxref=Genbank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11 NC_008149.1 cmsearch region 2234735 2235177 . - . ID=id185;Note=cspA;gbkey=misc_feature NC_008149.1 RefSeq gene 2234784 2234996 . - . ID=gene2086;Name=YPN_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10435;old_locus_tag=YPN_1974 NC_008149.1 Protein Homology CDS 2234784 2234996 . - 0 ID=cds2025;Parent=gene2086;Dbxref=Genbank:WP_002210893.1;Name=WP_002210893.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210893.1;transl_table=11 NC_008149.1 RefSeq gene 2235537 2238719 . + . ID=gene2087;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=YPN_RS10440;old_locus_tag=YPN_1975 NC_008149.1 Protein Homology CDS 2235537 2238719 . + 0 ID=cds2026;Parent=gene2087;Dbxref=Genbank:WP_002214048.1;Name=WP_002214048.1;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;gbkey=CDS;gene=lacZ;product=beta-galactosidase;protein_id=WP_002214048.1;transl_table=11 NC_008149.1 RefSeq gene 2239126 2240136 . + . ID=gene2088;Name=YPN_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10445;old_locus_tag=YPN_1976 NC_008149.1 Protein Homology CDS 2239126 2240136 . + 0 ID=cds2027;Parent=gene2088;Dbxref=Genbank:WP_002210897.1;Name=WP_002210897.1;gbkey=CDS;product=zinc-binding dehydrogenase;protein_id=WP_002210897.1;transl_table=11 NC_008149.1 RefSeq gene 2240419 2240952 . + . ID=gene2089;Name=YPN_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10450;old_locus_tag=YPN_1977 NC_008149.1 Protein Homology CDS 2240419 2240952 . + 0 ID=cds2028;Parent=gene2089;Dbxref=Genbank:WP_002214045.1;Name=WP_002214045.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214045.1;transl_table=11 NC_008149.1 RefSeq gene 2241458 2241907 . + . ID=gene2090;Name=YPN_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10455;old_locus_tag=YPN_1979 NC_008149.1 Protein Homology CDS 2241458 2241907 . + 0 ID=cds2029;Parent=gene2090;Dbxref=Genbank:WP_002210900.1;Name=WP_002210900.1;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002210900.1;transl_table=11 NC_008149.1 RefSeq gene 2241999 2242898 . + . ID=gene2091;Name=YPN_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10460;old_locus_tag=YPN_1980 NC_008149.1 Protein Homology CDS 2241999 2242898 . + 0 ID=cds2030;Parent=gene2091;Dbxref=Genbank:WP_002210901.1;Name=WP_002210901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210901.1;transl_table=11 NC_008149.1 RefSeq gene 2243201 2243404 . + . ID=gene2092;Name=YPN_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10465;old_locus_tag=YPN_1981 NC_008149.1 Protein Homology CDS 2243201 2243404 . + 0 ID=cds2031;Parent=gene2092;Dbxref=Genbank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210902.1;transl_table=11 NC_008149.1 RefSeq gene 2243706 2245031 . - . ID=gene2093;Name=YPN_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10470;old_locus_tag=YPN_1982 NC_008149.1 Protein Homology CDS 2243706 2245031 . - 0 ID=cds2032;Parent=gene2093;Dbxref=Genbank:WP_002210903.1;Name=WP_002210903.1;gbkey=CDS;product=phosphoanhydride phosphorylase;protein_id=WP_002210903.1;transl_table=11 NC_008149.1 RefSeq gene 2245332 2245505 . - . ID=gene2094;Name=YPN_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10475;old_locus_tag=YPN_1984 NC_008149.1 Protein Homology CDS 2245332 2245505 . - 0 ID=cds2033;Parent=gene2094;Dbxref=Genbank:WP_002210904.1;Name=WP_002210904.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210904.1;transl_table=11 NC_008149.1 RefSeq gene 2245563 2245946 . - . ID=gene2095;Name=YPN_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10480;old_locus_tag=YPN_1985 NC_008149.1 Protein Homology CDS 2245563 2245946 . - 0 ID=cds2034;Parent=gene2095;Dbxref=Genbank:WP_002227977.1;Name=WP_002227977.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002227977.1;transl_table=11 NC_008149.1 RefSeq gene 2246106 2246963 . + . ID=gene2096;Name=YPN_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10485;old_locus_tag=YPN_1986 NC_008149.1 Protein Homology CDS 2246106 2246963 . + 0 ID=cds2035;Parent=gene2096;Dbxref=Genbank:WP_002210906.1;Name=WP_002210906.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210906.1;transl_table=11 NC_008149.1 RefSeq gene 2247883 2249463 . + . ID=gene2097;Name=YPN_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10490;old_locus_tag=YPN_1987 NC_008149.1 Protein Homology CDS 2247883 2249463 . + 0 ID=cds2036;Parent=gene2097;Dbxref=Genbank:WP_002210907.1;Name=WP_002210907.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210907.1;transl_table=11 NC_008149.1 RefSeq gene 2249583 2249843 . + . ID=gene2098;Name=YPN_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10495;old_locus_tag=YPN_1988 NC_008149.1 Protein Homology CDS 2249583 2249843 . + 0 ID=cds2037;Parent=gene2098;Dbxref=Genbank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11 NC_008149.1 RefSeq gene 2250119 2251162 . + . ID=gene2099;Name=YPN_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10500;old_locus_tag=YPN_1989 NC_008149.1 Protein Homology CDS 2250119 2251162 . + 0 ID=cds2038;Parent=gene2099;Dbxref=Genbank:WP_002210909.1;Name=WP_002210909.1;gbkey=CDS;product=sucrose operon repressor;protein_id=WP_002210909.1;transl_table=11 NC_008149.1 RefSeq gene 2251308 2252561 . - . ID=gene2100;Name=YPN_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10505;old_locus_tag=YPN_1990 NC_008149.1 Protein Homology CDS 2251308 2252561 . - 0 ID=cds2039;Parent=gene2100;Dbxref=Genbank:WP_002210910.1;Name=WP_002210910.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=WP_002210910.1;transl_table=11 NC_008149.1 RefSeq gene 2252692 2253318 . + . ID=gene2101;Name=YPN_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10510;old_locus_tag=YPN_1991 NC_008149.1 Protein Homology CDS 2252692 2253318 . + 0 ID=cds2040;Parent=gene2101;Dbxref=Genbank:WP_002218214.1;Name=WP_002218214.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase E;protein_id=WP_002218214.1;transl_table=11 NC_008149.1 RefSeq gene 2253311 2253757 . + . ID=gene2102;Name=YPN_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10515;old_locus_tag=YPN_1992 NC_008149.1 Protein Homology CDS 2253311 2253757 . + 0 ID=cds2041;Parent=gene2102;Dbxref=Genbank:WP_002210912.1;Name=WP_002210912.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210912.1;transl_table=11 NC_008149.1 RefSeq gene 2253944 2255059 . + . ID=gene2103;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=YPN_RS10520;old_locus_tag=YPN_1993 NC_008149.1 Protein Homology CDS 2253944 2255059 . + 0 ID=cds2042;Parent=gene2103;Dbxref=Genbank:WP_002210913.1;Name=WP_002210913.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=WP_002210913.1;transl_table=11 NC_008149.1 RefSeq gene 2255117 2255743 . + . ID=gene2104;Name=YPN_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10525;old_locus_tag=YPN_1994 NC_008149.1 Protein Homology CDS 2255117 2255743 . + 0 ID=cds2043;Parent=gene2104;Dbxref=Genbank:WP_002210914.1;Name=WP_002210914.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=High frequency lysogenization protein HflD homolog;protein_id=WP_002210914.1;transl_table=11 NC_008149.1 RefSeq gene 2255804 2257174 . + . ID=gene2105;Name=YPN_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10530;old_locus_tag=YPN_1995 NC_008149.1 Protein Homology CDS 2255804 2257174 . + 0 ID=cds2044;Parent=gene2105;Dbxref=Genbank:WP_002210915.1;Name=WP_002210915.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_002210915.1;transl_table=11 NC_008149.1 RefSeq gene 2257362 2257985 . + . ID=gene2106;Name=YPN_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10535;old_locus_tag=YPN_1996 NC_008149.1 Protein Homology CDS 2257362 2257985 . + 0 ID=cds2045;Parent=gene2106;Dbxref=Genbank:WP_002210916.1;Name=WP_002210916.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210916.1;transl_table=11 NC_008149.1 RefSeq gene 2258196 2258867 . + . ID=gene2107;Name=YPN_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10540;old_locus_tag=YPN_1997 NC_008149.1 Protein Homology CDS 2258196 2258867 . + 0 ID=cds2046;Parent=gene2107;Dbxref=Genbank:WP_002210917.1;Name=WP_002210917.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210917.1;transl_table=11 NC_008149.1 RefSeq gene 2258873 2260327 . + . ID=gene2108;Name=YPN_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10545;old_locus_tag=YPN_1998 NC_008149.1 Protein Homology CDS 2258873 2260327 . + 0 ID=cds2047;Parent=gene2108;Dbxref=Genbank:WP_002210918.1;Name=WP_002210918.1;gbkey=CDS;product=sensor protein PhoQ;protein_id=WP_002210918.1;transl_table=11 NC_008149.1 RefSeq gene 2260411 2261532 . + . ID=gene2109;Name=YPN_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10550;old_locus_tag=YPN_1999 NC_008149.1 Protein Homology CDS 2260411 2261532 . + 0 ID=cds2048;Parent=gene2109;Dbxref=Genbank:WP_002210919.1;Name=WP_002210919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210919.1;transl_table=11 NC_008149.1 RefSeq gene 2261765 2263000 . - . ID=gene2110;Name=YPN_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10555;old_locus_tag=YPN_2000 NC_008149.1 Protein Homology CDS 2261765 2263000 . - 0 ID=cds2049;Parent=gene2110;Dbxref=Genbank:WP_002210920.1;Name=WP_002210920.1;gbkey=CDS;product=peptidase T;protein_id=WP_002210920.1;transl_table=11 NC_008149.1 RefSeq gene 2263330 2264166 . - . ID=gene2111;Name=YPN_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10560;old_locus_tag=YPN_2001 NC_008149.1 Protein Homology CDS 2263330 2264166 . - 0 ID=cds2050;Parent=gene2111;Dbxref=Genbank:WP_002210921.1;Name=WP_002210921.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=WP_002210921.1;transl_table=11 NC_008149.1 RefSeq gene 2264360 2265130 . - . ID=gene2112;Name=YPN_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10565;old_locus_tag=YPN_2003 NC_008149.1 Protein Homology CDS 2264360 2265130 . - 0 ID=cds2051;Parent=gene2112;Dbxref=Genbank:WP_002216175.1;Name=WP_002216175.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=WP_002216175.1;transl_table=11 NC_008149.1 RefSeq gene 2265149 2266396 . - . ID=gene2113;Name=YPN_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10570;old_locus_tag=YPN_2004 NC_008149.1 Protein Homology CDS 2265149 2266396 . - 0 ID=cds2052;Parent=gene2113;Dbxref=Genbank:WP_002210922.1;Name=WP_002210922.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002210922.1;transl_table=11 NC_008149.1 RefSeq gene 2266396 2267100 . - . ID=gene2114;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=YPN_RS10575;old_locus_tag=YPN_2005 NC_008149.1 Protein Homology CDS 2266396 2267100 . - 0 ID=cds2053;Parent=gene2114;Dbxref=Genbank:WP_002210923.1;Name=WP_002210923.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=WP_002210923.1;transl_table=11 NC_008149.1 RefSeq gene 2267093 2268295 . - . ID=gene2115;Name=YPN_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10580;old_locus_tag=YPN_2006 NC_008149.1 Protein Homology CDS 2267093 2268295 . - 0 ID=cds2054;Parent=gene2115;Dbxref=Genbank:WP_002222341.1;Name=WP_002222341.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=transporter;protein_id=WP_002222341.1;transl_table=11 NC_008149.1 RefSeq gene 2268565 2272011 . + . ID=gene2116;Name=YPN_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10585;old_locus_tag=YPN_2007 NC_008149.1 Protein Homology CDS 2268565 2272011 . + 0 ID=cds2055;Parent=gene2116;Dbxref=Genbank:WP_002210924.1;Name=WP_002210924.1;gbkey=CDS;product=transcription-repair coupling factor;protein_id=WP_002210924.1;transl_table=11 NC_008149.1 RefSeq gene 2272250 2272789 . - . ID=gene2117;Name=YPN_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10590;old_locus_tag=YPN_2008 NC_008149.1 Protein Homology CDS 2272250 2272789 . - 0 ID=cds2056;Parent=gene2117;Dbxref=Genbank:WP_002210925.1;Name=WP_002210925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210925.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2273083 2274400 . + . ID=id186;gbkey=repeat_region NC_008149.1 RefSeq gene 2273119 2274327 . - . ID=gene2118;Name=YPN_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10595;old_locus_tag=YPN_2009 NC_008149.1 Protein Homology CDS 2273119 2274327 . - 0 ID=cds2057;Parent=gene2118;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 2274423 2274836 . - . ID=gene2119;Name=YPN_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10600;old_locus_tag=YPN_2010 NC_008149.1 Protein Homology CDS 2274423 2274836 . - 0 ID=cds2058;Parent=gene2119;Dbxref=Genbank:WP_002213101.1;Name=WP_002213101.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213101.1;transl_table=11 NC_008149.1 RefSeq gene 2274844 2275209 . - . ID=gene2120;Name=YPN_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10605;old_locus_tag=YPN_2011 NC_008149.1 Protein Homology CDS 2274844 2275209 . - 0 ID=cds2059;Parent=gene2120;Dbxref=Genbank:WP_002213099.1;Name=WP_002213099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213099.1;transl_table=11 NC_008149.1 RefSeq gene 2275951 2277255 . - . ID=gene2121;Name=YPN_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10610;old_locus_tag=YPN_2012 NC_008149.1 Protein Homology CDS 2275951 2277255 . - 0 ID=cds2060;Parent=gene2121;Dbxref=Genbank:WP_002213097.1;Name=WP_002213097.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_002213097.1;transl_table=11 NC_008149.1 RefSeq gene 2277630 2278172 . - . ID=gene2122;Name=YPN_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10615;old_locus_tag=YPN_2013 NC_008149.1 Protein Homology CDS 2277630 2278172 . - 0 ID=cds2061;Parent=gene2122;Dbxref=Genbank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213095.1;transl_table=11 NC_008149.1 RefSeq gene 2278300 2279319 . - . ID=gene2123;Name=YPN_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10620;old_locus_tag=YPN_2014 NC_008149.1 Protein Homology CDS 2278300 2279319 . - 0 ID=cds2062;Parent=gene2123;Dbxref=Genbank:WP_002215854.1;Name=WP_002215854.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;product=beta-hexosaminidase;protein_id=WP_002215854.1;transl_table=11 NC_008149.1 RefSeq gene 2279402 2280268 . - . ID=gene2124;Name=YPN_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10625;old_locus_tag=YPN_2015 NC_008149.1 Protein Homology CDS 2279402 2280268 . - 0 ID=cds2063;Parent=gene2124;Dbxref=Genbank:WP_002213090.1;Name=WP_002213090.1;gbkey=CDS;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11 NC_008149.1 RefSeq gene 2280249 2280824 . - . ID=gene2125;Name=YPN_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10630;old_locus_tag=YPN_2016 NC_008149.1 Protein Homology CDS 2280249 2280824 . - 0 ID=cds2064;Parent=gene2125;Dbxref=Genbank:WP_002213089.1;Name=WP_002213089.1;gbkey=CDS;product=penicillin-binding protein activator LpoB;protein_id=WP_002213089.1;transl_table=11 NC_008149.1 RefSeq gene 2280865 2281254 . - . ID=gene2126;Name=YPN_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10635;old_locus_tag=YPN_2017 NC_008149.1 Protein Homology CDS 2280865 2281254 . - 0 ID=cds2065;Parent=gene2126;Dbxref=Genbank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002213088.1;transl_table=11 NC_008149.1 RefSeq gene 2281289 2281642 . - . ID=gene2127;Name=YPN_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10640;old_locus_tag=YPN_2018 NC_008149.1 Protein Homology CDS 2281289 2281642 . - 0 ID=cds2066;Parent=gene2127;Dbxref=Genbank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11 NC_008149.1 RefSeq gene 2281816 2282634 . - . ID=gene2128;Name=YPN_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10645;old_locus_tag=YPN_2019 NC_008149.1 Protein Homology CDS 2281816 2282634 . - 0 ID=cds2067;Parent=gene2128;Dbxref=Genbank:WP_002215853.1;Name=WP_002215853.1;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=WP_002215853.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2282963 2283687 . + . ID=id187;gbkey=repeat_region NC_008149.1 RefSeq gene 2283077 2283535 . - . ID=gene2129;Name=YPN_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10650;old_locus_tag=YPN_2020 NC_008149.1 Protein Homology CDS 2283077 2283535 . - 0 ID=cds2068;Parent=gene2129;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 2283725 2285158 . - . ID=gene2130;Name=YPN_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10655;old_locus_tag=YPN_2021 NC_008149.1 Protein Homology CDS 2283725 2285158 . - 0 ID=cds2069;Parent=gene2130;Dbxref=Genbank:WP_002213085.1;Name=WP_002213085.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS glucose transporter subunit IIBC;protein_id=WP_002213085.1;transl_table=11 NC_008149.1 RefSeq gene 2285464 2286273 . - . ID=gene2131;Name=YPN_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10660;old_locus_tag=YPN_2022 NC_008149.1 Protein Homology CDS 2285464 2286273 . - 0 ID=cds2070;Parent=gene2131;Dbxref=Genbank:WP_002213084.1;Name=WP_002213084.1;gbkey=CDS;product=DNAse;protein_id=WP_002213084.1;transl_table=11 NC_008149.1 RefSeq gene 2286288 2287310 . - . ID=gene2132;Name=YPN_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10665;old_locus_tag=YPN_2023 NC_008149.1 Protein Homology CDS 2286288 2287310 . - 0 ID=cds2071;Parent=gene2132;Dbxref=Genbank:WP_002213083.1;Name=WP_002213083.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;product=DNA polymerase III subunit delta';protein_id=WP_002213083.1;transl_table=11 NC_008149.1 RefSeq gene 2287310 2287948 . - . ID=gene2133;Name=YPN_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10670;old_locus_tag=YPN_2024 NC_008149.1 Protein Homology CDS 2287310 2287948 . - 0 ID=cds2072;Parent=gene2133;Dbxref=Genbank:WP_002213082.1;Name=WP_002213082.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_002213082.1;transl_table=11 NC_008149.1 RefSeq gene 2287938 2288963 . - . ID=gene2134;Name=YPN_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10675;old_locus_tag=YPN_2025 NC_008149.1 Protein Homology CDS 2287938 2288963 . - 0 ID=cds2073;Parent=gene2134;Dbxref=Genbank:WP_002217396.1;Name=WP_002217396.1;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=WP_002217396.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2289046 2289219 . + . ID=id188;gbkey=repeat_region NC_008149.1 RefSeq gene 2289252 2290058 . - . ID=gene2135;Name=YPN_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10680;old_locus_tag=YPN_2026 NC_008149.1 Protein Homology CDS 2289252 2290058 . - 0 ID=cds2074;Parent=gene2135;Dbxref=Genbank:WP_002213080.1;Name=WP_002213080.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=WP_002213080.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2290362 2291082 . + . ID=id189;gbkey=repeat_region NC_008149.1 RefSeq gene 2290474 2290932 . - . ID=gene2136;Name=YPN_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10685;old_locus_tag=YPN_2027 NC_008149.1 Protein Homology CDS 2290474 2290932 . - 0 ID=cds2075;Parent=gene2136;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 2291132 2292337 . - . ID=gene2137;Name=YPN_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10690;old_locus_tag=YPN_2028 NC_008149.1 Protein Homology CDS 2291132 2292337 . - 0 ID=cds2076;Parent=gene2137;Dbxref=Genbank:WP_002354075.1;Name=WP_002354075.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002354075.1;transl_table=11 NC_008149.1 RefSeq gene 2292468 2292704 . - . ID=gene2138;Name=YPN_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10695;old_locus_tag=YPN_2029 NC_008149.1 Protein Homology CDS 2292468 2292704 . - 0 ID=cds2077;Parent=gene2138;Dbxref=Genbank:WP_002220787.1;Name=WP_002220787.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002220787.1;transl_table=11 NC_008149.1 RefSeq gene 2292858 2293592 . - . ID=gene2139;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=YPN_RS10700;old_locus_tag=YPN_2030 NC_008149.1 Protein Homology CDS 2292858 2293592 . - 0 ID=cds2078;Parent=gene2139;Dbxref=Genbank:WP_002210935.1;Name=WP_002210935.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=WP_002210935.1;transl_table=11 NC_008149.1 RefSeq gene 2293606 2294535 . - . ID=gene2140;Name=YPN_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10705;old_locus_tag=YPN_2031 NC_008149.1 Protein Homology CDS 2293606 2294535 . - 0 ID=cds2079;Parent=gene2140;Dbxref=Genbank:WP_002210934.1;Name=WP_002210934.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_002210934.1;transl_table=11 NC_008149.1 RefSeq gene 2294573 2295523 . - . ID=gene2141;Name=YPN_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10710;old_locus_tag=YPN_2032 NC_008149.1 Protein Homology CDS 2294573 2295523 . - 0 ID=cds2080;Parent=gene2141;Dbxref=Genbank:WP_002210933.1;Name=WP_002210933.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase III;protein_id=WP_002210933.1;transl_table=11 NC_008149.1 RefSeq gene 2295530 2296534 . - . ID=gene2142;Name=YPN_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10715;old_locus_tag=YPN_2033 NC_008149.1 Protein Homology CDS 2295530 2296534 . - 0 ID=cds2081;Parent=gene2142;Dbxref=Genbank:WP_032465670.1;Name=WP_032465670.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_032465670.1;transl_table=11 NC_008149.1 RefSeq gene 2296598 2296765 . - . ID=gene2143;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=YPN_RS10720;old_locus_tag=YPN_2034 NC_008149.1 Protein Homology CDS 2296598 2296765 . - 0 ID=cds2082;Parent=gene2143;Dbxref=Genbank:WP_002210931.1;Name=WP_002210931.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11 NC_008149.1 RefSeq gene 2296778 2297302 . - . ID=gene2144;Name=YPN_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10725;old_locus_tag=YPN_2035 NC_008149.1 Protein Homology CDS 2296778 2297302 . - 0 ID=cds2083;Parent=gene2144;Dbxref=Genbank:WP_002210930.1;Name=WP_002210930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210930.1;transl_table=11 NC_008149.1 RefSeq gene 2297444 2298040 . + . ID=gene2145;Name=YPN_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10730;old_locus_tag=YPN_2036 NC_008149.1 Protein Homology CDS 2297444 2298040 . + 0 ID=cds2084;Parent=gene2145;Dbxref=Genbank:WP_002210928.1;Name=WP_002210928.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210928.1;transl_table=11 NC_008149.1 RefSeq gene 2298163 2299125 . - . ID=gene2146;Name=YPN_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10735;old_locus_tag=YPN_2037 NC_008149.1 Protein Homology CDS 2298163 2299125 . - 0 ID=cds2085;Parent=gene2146;Dbxref=Genbank:WP_002210927.1;Name=WP_002210927.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=WP_002210927.1;transl_table=11 NC_008149.1 RefSeq gene 2299709 2303350 . + . ID=gene2147;Name=YPN_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10740;old_locus_tag=YPN_2038 NC_008149.1 Protein Homology CDS 2299709 2303350 . + 0 ID=cds2086;Parent=gene2147;Dbxref=Genbank:WP_016257293.1;Name=WP_016257293.1;gbkey=CDS;product=ribonuclease E;protein_id=WP_016257293.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2303368 2304690 . + . ID=id190;gbkey=repeat_region NC_008149.1 RefSeq gene 2303446 2304654 . + . ID=gene2148;Name=YPN_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10745;old_locus_tag=YPN_2039 NC_008149.1 Protein Homology CDS 2303446 2304654 . + 0 ID=cds2087;Parent=gene2148;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 2304617 2304913 . - . ID=gene2149;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=YPN_RS10750;old_locus_tag=YPN_2040 NC_008149.1 Protein Homology CDS 2304617 2304913 . - 0 ID=cds2088;Parent=gene2149;Dbxref=Genbank:WP_002217041.1;Name=WP_002217041.1;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;gbkey=CDS;gene=bssS;product=biofilm formation regulatory protein BssS;protein_id=WP_002217041.1;transl_table=11 NC_008149.1 RefSeq gene 2305092 2305220 . + . ID=gene2150;Name=YPN_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10755 NC_008149.1 Protein Homology CDS 2305092 2305220 . + 0 ID=cds2089;Parent=gene2150;Dbxref=Genbank:WP_002358565.1;Name=WP_002358565.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002358565.1;transl_table=11 NC_008149.1 RefSeq gene 2305419 2305664 . - . ID=gene2151;Name=YPN_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10760;old_locus_tag=YPN_2041 NC_008149.1 Protein Homology CDS 2305419 2305664 . - 0 ID=cds2090;Parent=gene2151;Dbxref=Genbank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11 NC_008149.1 RefSeq gene 2305977 2307023 . - . ID=gene2152;Name=YPN_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10765;old_locus_tag=YPN_2042 NC_008149.1 Protein Homology CDS 2305977 2307023 . - 0 ID=cds2091;Parent=gene2152;Dbxref=Genbank:WP_002213109.1;Name=WP_002213109.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_002213109.1;transl_table=11 NC_008149.1 RefSeq gene 2307258 2307545 . + . ID=gene2153;Name=YPN_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10770;old_locus_tag=YPN_2043 NC_008149.1 Protein Homology CDS 2307258 2307545 . + 0 ID=cds2092;Parent=gene2153;Dbxref=Genbank:WP_002213107.1;Name=WP_002213107.1;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002213107.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2307780 2309103 . + . ID=id191;gbkey=repeat_region NC_008149.1 RefSeq gene 2307822 2309030 . - . ID=gene2154;Name=YPN_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10775;old_locus_tag=YPN_2044 NC_008149.1 Protein Homology CDS 2307822 2309030 . - 0 ID=cds2093;Parent=gene2154;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 2309391 2310506 . + . ID=gene2155;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=YPN_RS10780;old_locus_tag=YPN_2045 NC_008149.1 Protein Homology CDS 2309391 2310506 . + 0 ID=cds2094;Parent=gene2155;Dbxref=Genbank:WP_002211850.1;Name=WP_002211850.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002211850.1;transl_table=11 NC_008149.1 RefSeq gene 2310773 2311387 . + . ID=gene2156;Name=YPN_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10785;old_locus_tag=YPN_2046 NC_008149.1 Protein Homology CDS 2310773 2311387 . + 0 ID=cds2095;Parent=gene2156;Dbxref=Genbank:WP_002211851.1;Name=WP_002211851.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211851.1;transl_table=11 NC_008149.1 RefSeq gene 2311959 2313017 . - . ID=gene2157;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=YPN_RS10790;old_locus_tag=YPN_2047 NC_008149.1 Protein Homology CDS 2311959 2313017 . - 0 ID=cds2096;Parent=gene2157;Dbxref=Genbank:WP_002211853.1;Name=WP_002211853.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=pheromone autoinducer 2 transporter;protein_id=WP_002211853.1;transl_table=11 NC_008149.1 RefSeq gene 2313166 2314233 . - . ID=gene2158;Name=YPN_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10795;old_locus_tag=YPN_2048 NC_008149.1 Protein Homology CDS 2313166 2314233 . - 0 ID=cds2097;Parent=gene2158;Dbxref=Genbank:WP_002211854.1;Name=WP_002211854.1;gbkey=CDS;product=sulfurtransferase;protein_id=WP_002211854.1;transl_table=11 NC_008149.1 RefSeq gene 2314277 2314405 . - . ID=gene2159;Name=YPN_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10800 NC_008149.1 Protein Homology CDS 2314277 2314405 . - 0 ID=cds2098;Parent=gene2159;Dbxref=Genbank:WP_002211855.1;Name=WP_002211855.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211855.1;transl_table=11 NC_008149.1 RefSeq gene 2314592 2314756 . - . ID=gene2160;Name=YPN_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10805 NC_008149.1 Protein Homology CDS 2314592 2314756 . - 0 ID=cds2099;Parent=gene2160;Dbxref=Genbank:WP_002211856.1;Name=WP_002211856.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211856.1;transl_table=11 NC_008149.1 RefSeq gene 2315086 2315247 . - . ID=gene2161;Name=YPN_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10810;old_locus_tag=YPN_2050 NC_008149.1 Protein Homology CDS 2315086 2315247 . - 0 ID=cds2100;Parent=gene2161;Dbxref=Genbank:WP_002216894.1;Name=WP_002216894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216894.1;transl_table=11 NC_008149.1 RefSeq gene 2315284 2315961 . - . ID=gene2162;Name=YPN_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10815;old_locus_tag=YPN_2051 NC_008149.1 Protein Homology CDS 2315284 2315961 . - 0 ID=cds2101;Parent=gene2162;Dbxref=Genbank:WP_002211857.1;Name=WP_002211857.1;gbkey=CDS;product=transporter;protein_id=WP_002211857.1;transl_table=11 NC_008149.1 RefSeq gene 2316392 2317036 . + . ID=gene2163;Name=YPN_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10820;old_locus_tag=YPN_2052 NC_008149.1 Protein Homology CDS 2316392 2317036 . + 0 ID=cds2102;Parent=gene2163;Dbxref=Genbank:WP_002211858.1;Name=WP_002211858.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002211858.1;transl_table=11 NC_008149.1 RefSeq gene 2317029 2317766 . - . ID=gene2164;Name=YPN_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10825;old_locus_tag=YPN_2053 NC_008149.1 Protein Homology CDS 2317029 2317766 . - 0 ID=cds2103;Parent=gene2164;Dbxref=Genbank:WP_002211859.1;Name=WP_002211859.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211859.1;transl_table=11 NC_008149.1 RefSeq gene 2318253 2319179 . - . ID=gene2165;Name=YPN_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10830;old_locus_tag=YPN_2054 NC_008149.1 Protein Homology CDS 2318253 2319179 . - 0 ID=cds2104;Parent=gene2165;Dbxref=Genbank:WP_002211861.1;Name=WP_002211861.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211861.1;transl_table=11 NC_008149.1 RefSeq gene 2319294 2319503 . - . ID=gene2166;Name=YPN_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10835 NC_008149.1 Protein Homology CDS 2319294 2319503 . - 0 ID=cds2105;Parent=gene2166;Dbxref=Genbank:WP_002216551.1;Name=WP_002216551.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216551.1;transl_table=11 NC_008149.1 RefSeq gene 2319627 2320985 . + . ID=gene2167;Name=YPN_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10840;old_locus_tag=YPN_2055 NC_008149.1 Protein Homology CDS 2319627 2320985 . + 0 ID=cds2106;Parent=gene2167;Dbxref=Genbank:WP_002211863.1;Name=WP_002211863.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211863.1;transl_table=11 NC_008149.1 RefSeq gene 2321032 2321535 . + . ID=gene2168;Name=YPN_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10845;old_locus_tag=YPN_2056 NC_008149.1 Protein Homology CDS 2321032 2321535 . + 0 ID=cds2107;Parent=gene2168;Dbxref=Genbank:WP_002211864.1;Name=WP_002211864.1;gbkey=CDS;product=aldehyde-activating protein;protein_id=WP_002211864.1;transl_table=11 NC_008149.1 RefSeq gene 2321546 2322565 . + . ID=gene2169;Name=YPN_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10850;old_locus_tag=YPN_2057 NC_008149.1 Protein Homology CDS 2321546 2322565 . + 0 ID=cds2108;Parent=gene2169;Dbxref=Genbank:WP_002211865.1;Name=WP_002211865.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211865.1;transl_table=11 NC_008149.1 RefSeq gene 2322643 2323197 . - . ID=gene2170;Name=YPN_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10855;old_locus_tag=YPN_2058 NC_008149.1 Protein Homology CDS 2322643 2323197 . - 0 ID=cds2109;Parent=gene2170;Dbxref=Genbank:WP_002211866.1;Name=WP_002211866.1;gbkey=CDS;product=CRISPR-associated protein Csy4;protein_id=WP_002211866.1;transl_table=11 NC_008149.1 RefSeq gene 2323208 2324212 . - . ID=gene2171;Name=YPN_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10860;old_locus_tag=YPN_2059 NC_008149.1 Protein Homology CDS 2323208 2324212 . - 0 ID=cds2110;Parent=gene2171;Dbxref=Genbank:WP_002211867.1;Name=WP_002211867.1;gbkey=CDS;product=CRISPR-associated protein Cas5;protein_id=WP_002211867.1;transl_table=11 NC_008149.1 RefSeq gene 2324230 2325180 . - . ID=gene2172;Name=YPN_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10865;old_locus_tag=YPN_2060 NC_008149.1 Protein Homology CDS 2324230 2325180 . - 0 ID=cds2111;Parent=gene2172;Dbxref=Genbank:WP_002211868.1;Name=WP_002211868.1;gbkey=CDS;product=CRISPR type I-F system protein Csy2;protein_id=WP_002211868.1;transl_table=11 NC_008149.1 RefSeq gene 2325177 2326523 . - . ID=gene2173;Name=YPN_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10870;old_locus_tag=YPN_2061 NC_008149.1 Protein Homology CDS 2325177 2326523 . - 0 ID=cds2112;Parent=gene2173;Dbxref=Genbank:WP_002222491.1;Name=WP_002222491.1;gbkey=CDS;product=CRISPR type I-F system protein Csy1;protein_id=WP_002222491.1;transl_table=11 NC_008149.1 RefSeq gene 2326932 2330219 . - . ID=gene2174;Name=YPN_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10875;old_locus_tag=YPN_2062 NC_008149.1 Protein Homology CDS 2326932 2330219 . - 0 ID=cds2113;Parent=gene2174;Dbxref=Genbank:WP_002228501.1;Name=WP_002228501.1;gbkey=CDS;product=CRISPR-associated protein Cas3;protein_id=WP_002228501.1;transl_table=11 NC_008149.1 RefSeq gene 2330216 2331196 . - . ID=gene2175;Name=YPN_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10880;old_locus_tag=YPN_2063 NC_008149.1 Protein Homology CDS 2330216 2331196 . - 0 ID=cds2114;Parent=gene2175;Dbxref=Genbank:WP_002210191.1;Name=WP_002210191.1;gbkey=CDS;product=subtype I-F CRISPR-associated endonuclease Cas1;protein_id=WP_002210191.1;transl_table=11 NC_008149.1 RefSeq gene 2331981 2333225 . + . ID=gene2176;Name=YPN_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10885;old_locus_tag=YPN_2064 NC_008149.1 Protein Homology CDS 2331981 2333225 . + 0 ID=cds2115;Parent=gene2176;Dbxref=Genbank:WP_002210192.1;Name=WP_002210192.1;gbkey=CDS;product=miniconductance mechanosensitive channel;protein_id=WP_002210192.1;transl_table=11 NC_008149.1 RefSeq gene 2333820 2335094 . - . ID=gene2177;Name=YPN_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10890;old_locus_tag=YPN_2065 NC_008149.1 Protein Homology CDS 2333820 2335094 . - 0 ID=cds2116;Parent=gene2177;Dbxref=Genbank:WP_002210193.1;Name=WP_002210193.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210193.1;transl_table=11 NC_008149.1 RefSeq gene 2335133 2336248 . - . ID=gene2178;Name=YPN_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10895;old_locus_tag=YPN_2066 NC_008149.1 Protein Homology CDS 2335133 2336248 . - 0 ID=cds2117;Parent=gene2178;Dbxref=Genbank:WP_002210194.1;Name=WP_002210194.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210194.1;transl_table=11 NC_008149.1 RefSeq gene 2336371 2337309 . - . ID=gene2179;Name=YPN_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10900;old_locus_tag=YPN_2067 NC_008149.1 Protein Homology CDS 2336371 2337309 . - 0 ID=cds2118;Parent=gene2179;Dbxref=Genbank:WP_002213840.1;Name=WP_002213840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213840.1;transl_table=11 NC_008149.1 RefSeq gene 2337336 2338391 . - . ID=gene2180;Name=YPN_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10905;old_locus_tag=YPN_2068 NC_008149.1 Protein Homology CDS 2337336 2338391 . - 0 ID=cds2119;Parent=gene2180;Dbxref=Genbank:WP_002210196.1;Name=WP_002210196.1;gbkey=CDS;product=glycosidase;protein_id=WP_002210196.1;transl_table=11 NC_008149.1 RefSeq gene 2338538 2339362 . - . ID=gene2181;Name=YPN_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10910;old_locus_tag=YPN_2069 NC_008149.1 Protein Homology CDS 2338538 2339362 . - 0 ID=cds2120;Parent=gene2181;Dbxref=Genbank:WP_002210197.1;Name=WP_002210197.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210197.1;transl_table=11 NC_008149.1 RefSeq gene 2339363 2340238 . - . ID=gene2182;Name=YPN_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10915;old_locus_tag=YPN_2070 NC_008149.1 Protein Homology CDS 2339363 2340238 . - 0 ID=cds2121;Parent=gene2182;Dbxref=Genbank:WP_002210198.1;Name=WP_002210198.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210198.1;transl_table=11 NC_008149.1 RefSeq gene 2340347 2341633 . - . ID=gene2183;Name=YPN_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10920;old_locus_tag=YPN_2071 NC_008149.1 Protein Homology CDS 2340347 2341633 . - 0 ID=cds2122;Parent=gene2183;Dbxref=Genbank:WP_002210199.1;Name=WP_002210199.1;gbkey=CDS;product=solute-binding protein;protein_id=WP_002210199.1;transl_table=11 NC_008149.1 RefSeq gene 2341905 2342945 . + . ID=gene2184;Name=YPN_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10925;old_locus_tag=YPN_2072 NC_008149.1 Protein Homology CDS 2341905 2342945 . + 0 ID=cds2123;Parent=gene2184;Dbxref=Genbank:WP_002210200.1;Name=WP_002210200.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210200.1;transl_table=11 NC_008149.1 RefSeq gene 2342962 2344350 . + . ID=gene2185;Name=YPN_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10930;old_locus_tag=YPN_2073 NC_008149.1 Protein Homology CDS 2342962 2344350 . + 0 ID=cds2124;Parent=gene2185;Dbxref=Genbank:WP_002210201.1;Name=WP_002210201.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;product=phosphomannomutase;protein_id=WP_002210201.1;transl_table=11 NC_008149.1 RefSeq gene 2344450 2345529 . + . ID=gene2186;Name=YPN_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10935;old_locus_tag=YPN_2074 NC_008149.1 Protein Homology CDS 2344450 2345529 . + 0 ID=cds2125;Parent=gene2186;Dbxref=Genbank:WP_002210202.1;Name=WP_002210202.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210202.1;transl_table=11 NC_008149.1 RefSeq gene 2345794 2346246 . - . ID=gene2187;Name=YPN_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10940;old_locus_tag=YPN_2076 NC_008149.1 Protein Homology CDS 2345794 2346246 . - 0 ID=cds2126;Parent=gene2187;Dbxref=Genbank:WP_002224304.1;Name=WP_002224304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224304.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2346436 2346604 . + . ID=id192;gbkey=repeat_region NC_008149.1 RefSeq gene 2346597 2346989 . - . ID=gene2188;Name=YPN_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10945;old_locus_tag=YPN_2077 NC_008149.1 Protein Homology CDS 2346597 2346989 . - 0 ID=cds2127;Parent=gene2188;Dbxref=Genbank:WP_002213832.1;Name=WP_002213832.1;gbkey=CDS;product=adhesin;protein_id=WP_002213832.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2346758 2347008 . + . ID=id193;gbkey=repeat_region NC_008149.1 RefSeq gene 2347149 2347553 . - . ID=gene2189;Name=YPN_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10950;old_locus_tag=YPN_2078 NC_008149.1 Protein Homology CDS 2347149 2347553 . - 0 ID=cds2128;Parent=gene2189;Dbxref=Genbank:WP_002213829.1;Name=WP_002213829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213829.1;transl_table=11 NC_008149.1 RefSeq gene 2347695 2347862 . - . ID=gene2190;Name=YPN_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10955;old_locus_tag=YPN_2079 NC_008149.1 Protein Homology CDS 2347695 2347862 . - 0 ID=cds2129;Parent=gene2190;Dbxref=Genbank:WP_002213827.1;Name=WP_002213827.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213827.1;transl_table=11 NC_008149.1 RefSeq gene 2348065 2348262 . - . ID=gene2191;Name=YPN_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10960;old_locus_tag=YPN_2080 NC_008149.1 Protein Homology CDS 2348065 2348262 . - 0 ID=cds2130;Parent=gene2191;Dbxref=Genbank:WP_002210208.1;Name=WP_002210208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210208.1;transl_table=11 NC_008149.1 RefSeq gene 2348272 2350305 . - . ID=gene2192;Name=YPN_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10965;old_locus_tag=YPN_2081 NC_008149.1 Protein Homology CDS 2348272 2350305 . - 0 ID=cds2131;Parent=gene2192;Dbxref=Genbank:WP_002213825.1;Name=WP_002213825.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002213825.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2348877 2350358 . + . ID=id194;gbkey=repeat_region NC_008149.1 RefSeq gene 2350481 2350828 . - . ID=gene2193;Name=YPN_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10970 NC_008149.1 Protein Homology CDS 2350481 2350828 . - 0 ID=cds2132;Parent=gene2193;Dbxref=Genbank:WP_016256369.1;Name=WP_016256369.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256369.1;transl_table=11 NC_008149.1 RefSeq gene 2350969 2351220 . - . ID=gene2194;Name=YPN_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10975;old_locus_tag=YPN_2082 NC_008149.1 Protein Homology CDS 2350969 2351220 . - 0 ID=cds2133;Parent=gene2194;Dbxref=Genbank:WP_002213821.1;Name=WP_002213821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213821.1;transl_table=11 NC_008149.1 RefSeq gene 2351465 2351974 . - . ID=gene2195;Name=YPN_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10980;old_locus_tag=YPN_2083 NC_008149.1 Protein Homology CDS 2351465 2351974 . - 0 ID=cds2134;Parent=gene2195;Dbxref=Genbank:WP_002210211.1;Name=WP_002210211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210211.1;transl_table=11 NC_008149.1 RefSeq gene 2351976 2359571 . - . ID=gene2196;Name=YPN_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10985;old_locus_tag=YPN_2084 NC_008149.1 Protein Homology CDS 2351976 2359571 . - 0 ID=cds2135;Parent=gene2196;Dbxref=Genbank:WP_002213819.1;Name=WP_002213819.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002213819.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2352585 2353915 . + . ID=id195;gbkey=repeat_region NC_008149.1 RefSeq gene 2359727 2361415 . - . ID=gene2197;Name=YPN_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10990;old_locus_tag=YPN_2085 NC_008149.1 Protein Homology CDS 2359727 2361415 . - 0 ID=cds2136;Parent=gene2197;Dbxref=Genbank:WP_002210212.1;Name=WP_002210212.1;gbkey=CDS;product=hemolysin secretion/activation protein%2C ShlB/FhaC/HecB family;protein_id=WP_002210212.1;transl_table=11 NC_008149.1 RefSeq gene 2362068 2363033 . - . ID=gene2198;Name=YPN_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS10995;old_locus_tag=YPN_2086 NC_008149.1 Protein Homology CDS 2362068 2363033 . - 0 ID=cds2137;Parent=gene2198;Dbxref=Genbank:WP_002213817.1;Name=WP_002213817.1;gbkey=CDS;product=dioxygenase subunit beta;protein_id=WP_002213817.1;transl_table=11 NC_008149.1 RefSeq gene 2363129 2364183 . - . ID=gene2199;Name=YPN_RS11000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS11000;old_locus_tag=YPN_2088;pseudo=true NC_008149.1 Protein Homology CDS 2363129 2364183 . - 0 ID=cds2138;Parent=gene2199;exception=annotated by transcript or proteomic data;gbkey=CDS;product=dioxygenase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2364300 2365946 . - . ID=gene2200;Name=YPN_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11005;old_locus_tag=YPN_2089 NC_008149.1 Protein Homology CDS 2364300 2365946 . - 0 ID=cds2139;Parent=gene2200;Dbxref=Genbank:WP_002210215.1;Name=WP_002210215.1;Note=member of the betaine%2C carnitine%2C choline transporter (BCCT) family%3B unknown function;gbkey=CDS;product=betaine/carnitine/choline BCCT transporter;protein_id=WP_002210215.1;transl_table=11 NC_008149.1 RefSeq gene 2366312 2366494 . - . ID=gene2201;Name=YPN_RS11010;gbkey=Gene;gene_biotype=other;locus_tag=YPN_RS11010 NC_008149.1 RefSeq repeat_region 2366353 2366528 . + . ID=id196;gbkey=repeat_region NC_008149.1 RefSeq gene 2366563 2367648 . - . ID=gene2202;Name=YPN_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11015;old_locus_tag=YPN_2090 NC_008149.1 Protein Homology CDS 2366563 2367648 . - 0 ID=cds2140;Parent=gene2202;Dbxref=Genbank:WP_002210218.1;Name=WP_002210218.1;gbkey=CDS;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11 NC_008149.1 RefSeq gene 2367751 2368692 . + . ID=gene2203;Name=YPN_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11020;old_locus_tag=YPN_2091 NC_008149.1 Protein Homology CDS 2367751 2368692 . + 0 ID=cds2141;Parent=gene2203;Dbxref=Genbank:WP_002210219.1;Name=WP_002210219.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210219.1;transl_table=11 NC_008149.1 RefSeq gene 2368939 2369943 . + . ID=gene2204;Name=YPN_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11025;old_locus_tag=YPN_2092 NC_008149.1 Protein Homology CDS 2368939 2369943 . + 0 ID=cds2142;Parent=gene2204;Dbxref=Genbank:WP_002210220.1;Name=WP_002210220.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210220.1;transl_table=11 NC_008149.1 RefSeq gene 2370076 2371068 . - . ID=gene2205;Name=YPN_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11030;old_locus_tag=YPN_2093 NC_008149.1 Protein Homology CDS 2370076 2371068 . - 0 ID=cds2143;Parent=gene2205;Dbxref=Genbank:WP_002210221.1;Name=WP_002210221.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210221.1;transl_table=11 NC_008149.1 RefSeq gene 2371065 2372555 . - . ID=gene2206;Name=YPN_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11035;old_locus_tag=YPN_2094 NC_008149.1 Protein Homology CDS 2371065 2372555 . - 0 ID=cds2144;Parent=gene2206;Dbxref=Genbank:WP_002210222.1;Name=WP_002210222.1;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210222.1;transl_table=11 NC_008149.1 RefSeq gene 2372595 2373512 . - . ID=gene2207;Name=YPN_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11040;old_locus_tag=YPN_2095 NC_008149.1 Protein Homology CDS 2372595 2373512 . - 0 ID=cds2145;Parent=gene2207;Dbxref=Genbank:WP_002210223.1;Name=WP_002210223.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210223.1;transl_table=11 NC_008149.1 RefSeq gene 2373687 2374754 . - . ID=gene2208;Name=YPN_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11045;old_locus_tag=YPN_2096 NC_008149.1 Protein Homology CDS 2373687 2374754 . - 0 ID=cds2146;Parent=gene2208;Dbxref=Genbank:WP_002210224.1;Name=WP_002210224.1;gbkey=CDS;product=iditol 2-dehydrogenase;protein_id=WP_002210224.1;transl_table=11 NC_008149.1 RefSeq gene 2375496 2376164 . - . ID=gene2209;Name=YPN_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11050;old_locus_tag=YPN_2097 NC_008149.1 Protein Homology CDS 2375496 2376164 . - 0 ID=cds2147;Parent=gene2209;Dbxref=Genbank:WP_002210225.1;Name=WP_002210225.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210225.1;transl_table=11 NC_008149.1 RefSeq gene 2376360 2376902 . - . ID=gene2210;Name=YPN_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11055;old_locus_tag=YPN_2098 NC_008149.1 Protein Homology CDS 2376360 2376902 . - 0 ID=cds2148;Parent=gene2210;Dbxref=Genbank:WP_002210227.1;Name=WP_002210227.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210227.1;transl_table=11 NC_008149.1 RefSeq gene 2377140 2378078 . - . ID=gene2211;Name=YPN_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11060;old_locus_tag=YPN_2099 NC_008149.1 Protein Homology CDS 2377140 2378078 . - 0 ID=cds2149;Parent=gene2211;Dbxref=Genbank:WP_002210228.1;Name=WP_002210228.1;gbkey=CDS;product=cytochrome C551;protein_id=WP_002210228.1;transl_table=11 NC_008149.1 RefSeq gene 2378394 2378918 . - . ID=gene2212;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=YPN_RS11065;old_locus_tag=YPN_2100 NC_008149.1 Protein Homology CDS 2378394 2378918 . - 0 ID=cds2150;Parent=gene2212;Dbxref=Genbank:WP_002210229.1;Name=WP_002210229.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=WP_002210229.1;transl_table=11 NC_008149.1 RefSeq gene 2379323 2380210 . + . ID=gene2213;Name=YPN_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11070;old_locus_tag=YPN_2102 NC_008149.1 Protein Homology CDS 2379323 2380210 . + 0 ID=cds2151;Parent=gene2213;Dbxref=Genbank:WP_002213809.1;Name=WP_002213809.1;gbkey=CDS;product=threonine transporter RhtB;protein_id=WP_002213809.1;transl_table=11 NC_008149.1 RefSeq gene 2380226 2380723 . + . ID=gene2214;Name=YPN_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11075;old_locus_tag=YPN_2103 NC_008149.1 Protein Homology CDS 2380226 2380723 . + 0 ID=cds2152;Parent=gene2214;Dbxref=Genbank:WP_002210231.1;Name=WP_002210231.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002210231.1;transl_table=11 NC_008149.1 RefSeq gene 2380746 2381522 . + . ID=gene2215;Name=YPN_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11080;old_locus_tag=YPN_2104 NC_008149.1 Protein Homology CDS 2380746 2381522 . + 0 ID=cds2153;Parent=gene2215;Dbxref=Genbank:WP_002210232.1;Name=WP_002210232.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=WP_002210232.1;transl_table=11 NC_008149.1 RefSeq gene 2381779 2382282 . + . ID=gene2216;Name=YPN_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11085;old_locus_tag=YPN_2105 NC_008149.1 Protein Homology CDS 2381779 2382282 . + 0 ID=cds2154;Parent=gene2216;Dbxref=Genbank:WP_002210233.1;Name=WP_002210233.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;product=DNA protection during starvation protein;protein_id=WP_002210233.1;transl_table=11 NC_008149.1 RefSeq gene 2382602 2383729 . + . ID=gene2217;Name=YPN_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11090;old_locus_tag=YPN_2106 NC_008149.1 Protein Homology CDS 2382602 2383729 . + 0 ID=cds2155;Parent=gene2217;Dbxref=Genbank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;product=transporter;protein_id=WP_002210234.1;transl_table=11 NC_008149.1 RefSeq gene 2384299 2385042 . + . ID=gene2218;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YPN_RS11095;old_locus_tag=YPN_2107 NC_008149.1 Protein Homology CDS 2384299 2385042 . + 0 ID=cds2156;Parent=gene2218;Dbxref=Genbank:WP_002210235.1;Name=WP_002210235.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=glutamine ABC transporter substrate-binding protein;protein_id=WP_002210235.1;transl_table=11 NC_008149.1 RefSeq gene 2385077 2385733 . + . ID=gene2219;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=YPN_RS11100;old_locus_tag=YPN_2108 NC_008149.1 Protein Homology CDS 2385077 2385733 . + 0 ID=cds2157;Parent=gene2219;Dbxref=Genbank:WP_002210236.1;Name=WP_002210236.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=WP_002210236.1;transl_table=11 NC_008149.1 RefSeq gene 2385730 2386452 . + . ID=gene2220;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=YPN_RS11105;old_locus_tag=YPN_2109 NC_008149.1 Protein Homology CDS 2385730 2386452 . + 0 ID=cds2158;Parent=gene2220;Dbxref=Genbank:WP_002210237.1;Name=WP_002210237.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=WP_002210237.1;transl_table=11 NC_008149.1 RefSeq gene 2386692 2387990 . - . ID=gene2221;Name=YPN_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11110;old_locus_tag=YPN_2110 NC_008149.1 Protein Homology CDS 2386692 2387990 . - 0 ID=cds2159;Parent=gene2221;Dbxref=Genbank:WP_002210238.1;Name=WP_002210238.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002210238.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2387961 2389918 . + . ID=id197;gbkey=repeat_region NC_008149.1 RefSeq gene 2388049 2389071 . + . ID=gene2222;Name=YPN_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11115;old_locus_tag=YPN_2111 NC_008149.1 Protein Homology CDS 2388049 2389071 . + 0 ID=cds2160;Parent=gene2222;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 2389071 2389850 . + . ID=gene2223;Name=YPN_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11120;old_locus_tag=YPN_2112 NC_008149.1 Protein Homology CDS 2389071 2389850 . + 0 ID=cds2161;Parent=gene2223;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2390021 2390195 . + . ID=id198;gbkey=repeat_region NC_008149.1 RefSeq gene 2390712 2391722 . - . ID=gene2224;Name=YPN_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11125;old_locus_tag=YPN_2114 NC_008149.1 Protein Homology CDS 2390712 2391722 . - 0 ID=cds2162;Parent=gene2224;Dbxref=Genbank:WP_002210239.1;Name=WP_002210239.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase F;protein_id=WP_002210239.1;transl_table=11 NC_008149.1 RefSeq gene 2392010 2392270 . + . ID=gene2225;Name=YPN_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11130;old_locus_tag=YPN_2115 NC_008149.1 Protein Homology CDS 2392010 2392270 . + 0 ID=cds2163;Parent=gene2225;Dbxref=Genbank:WP_002210240.1;Name=WP_002210240.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210240.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2392434 2392607 . + . ID=id199;gbkey=repeat_region NC_008149.1 RefSeq gene 2392652 2393611 . - . ID=gene2226;Name=YPN_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11135;old_locus_tag=YPN_2117 NC_008149.1 Protein Homology CDS 2392652 2393611 . - 0 ID=cds2164;Parent=gene2226;Dbxref=Genbank:WP_002210242.1;Name=WP_002210242.1;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002210242.1;transl_table=11 NC_008149.1 RefSeq gene 2393677 2395092 . - . ID=gene2227;Name=YPN_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11140;old_locus_tag=YPN_2118 NC_008149.1 Protein Homology CDS 2393677 2395092 . - 0 ID=cds2165;Parent=gene2227;Dbxref=Genbank:WP_002210243.1;Name=WP_002210243.1;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;protein_id=WP_002210243.1;transl_table=11 NC_008149.1 RefSeq gene 2395080 2396051 . - . ID=gene2228;Name=YPN_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11145;old_locus_tag=YPN_2119 NC_008149.1 Protein Homology CDS 2395080 2396051 . - 0 ID=cds2166;Parent=gene2228;Dbxref=Genbank:WP_002210244.1;Name=WP_002210244.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;product=o-succinylbenzoate synthase;protein_id=WP_002210244.1;transl_table=11 NC_008149.1 RefSeq gene 2396051 2396908 . - . ID=gene2229;Name=YPN_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11150;old_locus_tag=YPN_2120 NC_008149.1 Protein Homology CDS 2396051 2396908 . - 0 ID=cds2167;Parent=gene2229;Dbxref=Genbank:WP_002210245.1;Name=WP_002210245.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;product=naphthoate synthase;protein_id=WP_002210245.1;transl_table=11 NC_008149.1 RefSeq gene 2396922 2397740 . - . ID=gene2230;Name=YPN_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11155;old_locus_tag=YPN_2121 NC_008149.1 Protein Homology CDS 2396922 2397740 . - 0 ID=cds2168;Parent=gene2230;Dbxref=Genbank:WP_002228508.1;Name=WP_002228508.1;gbkey=CDS;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_002228508.1;transl_table=11 NC_008149.1 RefSeq gene 2397737 2399440 . - . ID=gene2231;Name=YPN_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11160;old_locus_tag=YPN_2122 NC_008149.1 Protein Homology CDS 2397737 2399440 . - 0 ID=cds2169;Parent=gene2231;Dbxref=Genbank:WP_002210247.1;Name=WP_002210247.1;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=WP_002210247.1;transl_table=11 NC_008149.1 RefSeq gene 2399668 2401035 . - . ID=gene2232;Name=YPN_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11165;old_locus_tag=YPN_2123 NC_008149.1 Protein Homology CDS 2399668 2401035 . - 0 ID=cds2170;Parent=gene2232;Dbxref=Genbank:WP_002210248.1;Name=WP_002210248.1;gbkey=CDS;product=menaquinone-specific isochorismate synthase;protein_id=WP_002210248.1;transl_table=11 NC_008149.1 RefSeq gene 2401563 2402207 . - . ID=gene2233;Name=YPN_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11170;old_locus_tag=YPN_2124 NC_008149.1 Protein Homology CDS 2401563 2402207 . - 0 ID=cds2171;Parent=gene2233;Dbxref=Genbank:WP_002210249.1;Name=WP_002210249.1;gbkey=CDS;product=protein RhiA;protein_id=WP_002210249.1;transl_table=11 NC_008149.1 RefSeq gene 2402762 2403070 . - . ID=gene2234;Name=YPN_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11175;old_locus_tag=YPN_2125 NC_008149.1 Protein Homology CDS 2402762 2403070 . - 0 ID=cds2172;Parent=gene2234;Dbxref=Genbank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210251.1;transl_table=11 NC_008149.1 RefSeq gene 2403634 2403777 . + . ID=gene2235;Name=YPN_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11180;old_locus_tag=YPN_2127 NC_008149.1 Protein Homology CDS 2403634 2403777 . + 0 ID=cds2173;Parent=gene2235;Dbxref=Genbank:WP_002210253.1;Name=WP_002210253.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210253.1;transl_table=11 NC_008149.1 RefSeq gene 2403718 2403930 . - . ID=gene2236;Name=YPN_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11185 NC_008149.1 Protein Homology CDS 2403718 2403930 . - 0 ID=cds2174;Parent=gene2236;Dbxref=Genbank:WP_002215888.1;Name=WP_002215888.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215888.1;transl_table=11 NC_008149.1 RefSeq gene 2403996 2405867 . - . ID=gene2237;Name=YPN_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11190;old_locus_tag=YPN_2128 NC_008149.1 Protein Homology CDS 2403996 2405867 . - 0 ID=cds2175;Parent=gene2237;Dbxref=Genbank:WP_002210254.1;Name=WP_002210254.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=WP_002210254.1;transl_table=11 NC_008149.1 RefSeq gene 2405877 2406392 . - . ID=gene2238;Name=YPN_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11195;old_locus_tag=YPN_2129 NC_008149.1 Protein Homology CDS 2405877 2406392 . - 0 ID=cds2176;Parent=gene2238;Dbxref=Genbank:WP_002210255.1;Name=WP_002210255.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210255.1;transl_table=11 NC_008149.1 RefSeq gene 2406422 2407738 . - . ID=gene2239;Name=YPN_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11200;old_locus_tag=YPN_2130 NC_008149.1 Protein Homology CDS 2406422 2407738 . - 0 ID=cds2177;Parent=gene2239;Dbxref=Genbank:WP_002215889.1;Name=WP_002215889.1;gbkey=CDS;product=2-ketogluconate transporter;protein_id=WP_002215889.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2408091 2408263 . + . ID=id200;gbkey=repeat_region NC_008149.1 RefSeq gene 2408284 2409234 . - . ID=gene2240;Name=YPN_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11205;old_locus_tag=YPN_2131 NC_008149.1 Protein Homology CDS 2408284 2409234 . - 0 ID=cds2178;Parent=gene2240;Dbxref=Genbank:WP_002210257.1;Name=WP_002210257.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_002210257.1;transl_table=11 NC_008149.1 RefSeq gene 2409253 2409375 . - . ID=gene2241;Name=YPN_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11210 NC_008149.1 Protein Homology CDS 2409253 2409375 . - 0 ID=cds2179;Parent=gene2241;Dbxref=Genbank:WP_002210258.1;Name=WP_002210258.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210258.1;transl_table=11 NC_008149.1 RefSeq gene 2409700 2410692 . - . ID=gene2242;Name=YPN_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11215;old_locus_tag=YPN_2132 NC_008149.1 Protein Homology CDS 2409700 2410692 . - 0 ID=cds2180;Parent=gene2242;Dbxref=Genbank:WP_002210260.1;Name=WP_002210260.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210260.1;transl_table=11 NC_008149.1 RefSeq gene 2411161 2412444 . + . ID=gene2243;Name=YPN_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11220;old_locus_tag=YPN_2133 NC_008149.1 Protein Homology CDS 2411161 2412444 . + 0 ID=cds2181;Parent=gene2243;Dbxref=Genbank:WP_002210262.1;Name=WP_002210262.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002210262.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2412997 2413174 . + . ID=id201;gbkey=repeat_region NC_008149.1 RefSeq gene 2413203 2413967 . + . ID=gene2244;Name=YPN_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11225;old_locus_tag=YPN_2134 NC_008149.1 Protein Homology CDS 2413203 2413967 . + 0 ID=cds2182;Parent=gene2244;Dbxref=Genbank:WP_002210264.1;Name=WP_002210264.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=WP_002210264.1;transl_table=11 NC_008149.1 RefSeq gene 2414016 2414552 . + . ID=gene2245;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPN_RS11230;old_locus_tag=YPN_2135 NC_008149.1 Protein Homology CDS 2414016 2414552 . + 0 ID=cds2183;Parent=gene2245;Dbxref=Genbank:WP_002210265.1;Name=WP_002210265.1;gbkey=CDS;gene=idnK;product=D-gluconate kinase;protein_id=WP_002210265.1;transl_table=11 NC_008149.1 RefSeq gene 2414630 2415097 . + . ID=gene2246;Name=YPN_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11235;old_locus_tag=YPN_2136 NC_008149.1 Protein Homology CDS 2414630 2415097 . + 0 ID=cds2184;Parent=gene2246;Dbxref=Genbank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210266.1;transl_table=11 NC_008149.1 RefSeq gene 2415465 2416655 . - . ID=gene2247;Name=YPN_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11240;old_locus_tag=YPN_2137 NC_008149.1 Protein Homology CDS 2415465 2416655 . - 0 ID=cds2185;Parent=gene2247;Dbxref=Genbank:WP_002210267.1;Name=WP_002210267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210267.1;transl_table=11 NC_008149.1 RefSeq gene 2416891 2418354 . - . ID=gene2248;Name=YPN_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11245;old_locus_tag=YPN_2138 NC_008149.1 Protein Homology CDS 2416891 2418354 . - 0 ID=cds2186;Parent=gene2248;Dbxref=Genbank:WP_002210268.1;Name=WP_002210268.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_002210268.1;transl_table=11 NC_008149.1 RefSeq gene 2418361 2419893 . - . ID=gene2249;Name=YPN_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11250;old_locus_tag=YPN_2139 NC_008149.1 Protein Homology CDS 2418361 2419893 . - 0 ID=cds2187;Parent=gene2249;Dbxref=Genbank:WP_002210269.1;Name=WP_002210269.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_002210269.1;transl_table=11 NC_008149.1 RefSeq gene 2419933 2421777 . - . ID=gene2250;Name=YPN_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11255;old_locus_tag=YPN_2140 NC_008149.1 Protein Homology CDS 2419933 2421777 . - 0 ID=cds2188;Parent=gene2250;Dbxref=Genbank:WP_002210270.1;Name=WP_002210270.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_002210270.1;transl_table=11 NC_008149.1 RefSeq gene 2421774 2422076 . - . ID=gene2251;Name=YPN_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11260;old_locus_tag=YPN_2141 NC_008149.1 Protein Homology CDS 2421774 2422076 . - 0 ID=cds2189;Parent=gene2251;Dbxref=Genbank:WP_002210271.1;Name=WP_002210271.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit K;protein_id=WP_002210271.1;transl_table=11 NC_008149.1 RefSeq gene 2422073 2422618 . - . ID=gene2252;Name=YPN_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11265;old_locus_tag=YPN_2142 NC_008149.1 Protein Homology CDS 2422073 2422618 . - 0 ID=cds2190;Parent=gene2252;Dbxref=Genbank:WP_002210272.1;Name=WP_002210272.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_002210272.1;transl_table=11 NC_008149.1 RefSeq gene 2422631 2423173 . - . ID=gene2253;Name=YPN_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11270;old_locus_tag=YPN_2143 NC_008149.1 Protein Homology CDS 2422631 2423173 . - 0 ID=cds2191;Parent=gene2253;Dbxref=Genbank:WP_002210273.1;Name=WP_002210273.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit I;protein_id=WP_002210273.1;transl_table=11 NC_008149.1 RefSeq gene 2423188 2424165 . - . ID=gene2254;Name=YPN_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11275;old_locus_tag=YPN_2144 NC_008149.1 Protein Homology CDS 2423188 2424165 . - 0 ID=cds2192;Parent=gene2254;Dbxref=Genbank:WP_002210274.1;Name=WP_002210274.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit H;protein_id=WP_002210274.1;transl_table=11 NC_008149.1 RefSeq gene 2424162 2426906 . - . ID=gene2255;Name=YPN_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11280;old_locus_tag=YPN_2145 NC_008149.1 Protein Homology CDS 2424162 2426906 . - 0 ID=cds2193;Parent=gene2255;Dbxref=Genbank:WP_002210275.1;Name=WP_002210275.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_002210275.1;transl_table=11 NC_008149.1 RefSeq gene 2426993 2428378 . - . ID=gene2256;Name=YPN_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11285;old_locus_tag=YPN_2146 NC_008149.1 Protein Homology CDS 2426993 2428378 . - 0 ID=cds2194;Parent=gene2256;Dbxref=Genbank:WP_002210276.1;Name=WP_002210276.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase subunit F;protein_id=WP_002210276.1;transl_table=11 NC_008149.1 RefSeq gene 2428375 2428938 . - . ID=gene2257;Name=YPN_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11290;old_locus_tag=YPN_2147 NC_008149.1 Protein Homology CDS 2428375 2428938 . - 0 ID=cds2195;Parent=gene2257;Dbxref=Genbank:WP_002228514.1;Name=WP_002228514.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=WP_002228514.1;transl_table=11 NC_008149.1 RefSeq gene 2428941 2430737 . - . ID=gene2258;Name=YPN_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11295;old_locus_tag=YPN_2148 NC_008149.1 Protein Homology CDS 2428941 2430737 . - 0 ID=cds2196;Parent=gene2258;Dbxref=Genbank:WP_002210277.1;Name=WP_002210277.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11 NC_008149.1 RefSeq gene 2430878 2431555 . - . ID=gene2259;Name=YPN_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11300;old_locus_tag=YPN_2149 NC_008149.1 Protein Homology CDS 2430878 2431555 . - 0 ID=cds2197;Parent=gene2259;Dbxref=Genbank:WP_002210278.1;Name=WP_002210278.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_002210278.1;transl_table=11 NC_008149.1 RefSeq gene 2431657 2432157 . - . ID=gene2260;Name=YPN_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11305;old_locus_tag=YPN_2150 NC_008149.1 Protein Homology CDS 2431657 2432157 . - 0 ID=cds2198;Parent=gene2260;Dbxref=Genbank:WP_002210279.1;Name=WP_002210279.1;gbkey=CDS;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002210279.1;transl_table=11 NC_008149.1 RefSeq gene 2432835 2433767 . - . ID=gene2261;Name=YPN_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11310;old_locus_tag=YPN_2151 NC_008149.1 Protein Homology CDS 2432835 2433767 . - 0 ID=cds2199;Parent=gene2261;Dbxref=Genbank:WP_002210280.1;Name=WP_002210280.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210280.1;transl_table=11 NC_008149.1 RefSeq gene 2434218 2434490 . - . ID=gene2262;Name=YPN_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11315 NC_008149.1 Protein Homology CDS 2434218 2434490 . - 0 ID=cds2200;Parent=gene2262;Dbxref=Genbank:WP_002217838.1;Name=WP_002217838.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217838.1;transl_table=11 NC_008149.1 RefSeq gene 2434623 2435837 . + . ID=gene2263;Name=YPN_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11320;old_locus_tag=YPN_2152 NC_008149.1 Protein Homology CDS 2434623 2435837 . + 0 ID=cds2201;Parent=gene2263;Dbxref=Genbank:WP_002210282.1;Name=WP_002210282.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;product=aminotransferase;protein_id=WP_002210282.1;transl_table=11 NC_008149.1 RefSeq gene 2435988 2436581 . + . ID=gene2264;Name=YPN_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11325;old_locus_tag=YPN_2153 NC_008149.1 Protein Homology CDS 2435988 2436581 . + 0 ID=cds2202;Parent=gene2264;Dbxref=Genbank:WP_002210283.1;Name=WP_002210283.1;gbkey=CDS;product=5'-nucleotidase;protein_id=WP_002210283.1;transl_table=11 NC_008149.1 RefSeq gene 2436628 2436819 . - . ID=gene2265;Name=YPN_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11330 NC_008149.1 Protein Homology CDS 2436628 2436819 . - 0 ID=cds2203;Parent=gene2265;Dbxref=Genbank:WP_002216053.1;Name=WP_002216053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216053.1;transl_table=11 NC_008149.1 RefSeq gene 2436924 2438756 . - . ID=gene2266;Name=YPN_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11335;old_locus_tag=YPN_2154 NC_008149.1 Protein Homology CDS 2436924 2438756 . - 0 ID=cds2204;Parent=gene2266;Dbxref=Genbank:WP_002227880.1;Name=WP_002227880.1;gbkey=CDS;product=citrate transporter;protein_id=WP_002227880.1;transl_table=11 NC_008149.1 RefSeq gene 2439048 2439704 . - . ID=gene2267;Name=YPN_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11340;old_locus_tag=YPN_2155 NC_008149.1 Protein Homology CDS 2439048 2439704 . - 0 ID=cds2205;Parent=gene2267;Dbxref=Genbank:WP_002210285.1;Name=WP_002210285.1;gbkey=CDS;product=phosphatase;protein_id=WP_002210285.1;transl_table=11 NC_008149.1 RefSeq gene 2439869 2440363 . - . ID=gene2268;Name=YPN_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11345;old_locus_tag=YPN_2156 NC_008149.1 Protein Homology CDS 2439869 2440363 . - 0 ID=cds2206;Parent=gene2268;Dbxref=Genbank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210286.1;transl_table=11 NC_008149.1 RefSeq gene 2440671 2441126 . - . ID=gene2269;Name=YPN_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11350;old_locus_tag=YPN_2157 NC_008149.1 Protein Homology CDS 2440671 2441126 . - 0 ID=cds2207;Parent=gene2269;Dbxref=Genbank:WP_002210287.1;Name=WP_002210287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210287.1;transl_table=11 NC_008149.1 RefSeq gene 2441367 2441558 . + . ID=gene2270;Name=YPN_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11355 NC_008149.1 Protein Homology CDS 2441367 2441558 . + 0 ID=cds2208;Parent=gene2270;Dbxref=Genbank:WP_002216055.1;Name=WP_002216055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216055.1;transl_table=11 NC_008149.1 RefSeq gene 2441548 2442750 . + . ID=gene2271;Name=YPN_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11360;old_locus_tag=YPN_2158 NC_008149.1 Protein Homology CDS 2441548 2442750 . + 0 ID=cds2209;Parent=gene2271;Dbxref=Genbank:WP_002210288.1;Name=WP_002210288.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_002210288.1;transl_table=11 NC_008149.1 RefSeq gene 2442933 2445071 . + . ID=gene2272;Name=YPN_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11365;old_locus_tag=YPN_2159 NC_008149.1 Protein Homology CDS 2442933 2445071 . + 0 ID=cds2210;Parent=gene2272;Dbxref=Genbank:WP_002265141.1;Name=WP_002265141.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_002265141.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2445085 2445255 . + . ID=id202;gbkey=repeat_region NC_008149.1 RefSeq gene 2445337 2446371 . - . ID=gene2273;Name=YPN_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11370;old_locus_tag=YPN_2160 NC_008149.1 Protein Homology CDS 2445337 2446371 . - 0 ID=cds2211;Parent=gene2273;Dbxref=Genbank:WP_002216059.1;Name=WP_002216059.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002216059.1;transl_table=11 NC_008149.1 RefSeq gene 2446738 2447181 . + . ID=gene2274;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=YPN_RS11375;old_locus_tag=YPN_2161 NC_008149.1 Protein Homology CDS 2446738 2447181 . + 0 ID=cds2212;Parent=gene2274;Dbxref=Genbank:WP_002210291.1;Name=WP_002210291.1;Note=TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;gbkey=CDS;gene=cmtB;product=PTS ascorbate transporter subunit IIA;protein_id=WP_002210291.1;transl_table=11 NC_008149.1 RefSeq gene 2447350 2447604 . + . ID=gene2275;Name=YPN_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11380;old_locus_tag=YPN_2162 NC_008149.1 Protein Homology CDS 2447350 2447604 . + 0 ID=cds2213;Parent=gene2275;Dbxref=Genbank:WP_002210293.1;Name=WP_002210293.1;gbkey=CDS;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002210293.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2447589 2448908 . + . ID=id203;gbkey=repeat_region NC_008149.1 RefSeq gene 2447626 2448835 . - . ID=gene2276;Name=YPN_RS11385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS11385;pseudo=true NC_008149.1 Protein Homology CDS 2447626 2448835 . - 0 ID=cds2214;Parent=gene2276;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2448975 2450231 . + . ID=gene2277;Name=YPN_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11390;old_locus_tag=YPN_2165 NC_008149.1 Protein Homology CDS 2448975 2450231 . + 0 ID=cds2215;Parent=gene2277;Dbxref=Genbank:WP_002222248.1;Name=WP_002222248.1;gbkey=CDS;product=PTS beta-glucoside transporter subunit IIBC;protein_id=WP_002222248.1;transl_table=11 NC_008149.1 RefSeq gene 2450348 2450896 . - . ID=gene2278;Name=YPN_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11395;old_locus_tag=YPN_2166 NC_008149.1 Protein Homology CDS 2450348 2450896 . - 0 ID=cds2216;Parent=gene2278;Dbxref=Genbank:WP_002209742.1;Name=WP_002209742.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002209742.1;transl_table=11 NC_008149.1 RefSeq gene 2451118 2451705 . - . ID=gene2279;Name=YPN_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11400;old_locus_tag=YPN_2167 NC_008149.1 Protein Homology CDS 2451118 2451705 . - 0 ID=cds2217;Parent=gene2279;Dbxref=Genbank:WP_002225358.1;Name=WP_002225358.1;gbkey=CDS;product=phosphodiesterase;protein_id=WP_002225358.1;transl_table=11 NC_008149.1 RefSeq gene 2451893 2452585 . - . ID=gene2280;Name=YPN_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11405;old_locus_tag=YPN_2168 NC_008149.1 Protein Homology CDS 2451893 2452585 . - 0 ID=cds2218;Parent=gene2280;Dbxref=Genbank:WP_002209740.1;Name=WP_002209740.1;gbkey=CDS;product=diguanylate phosphodiesterase;protein_id=WP_002209740.1;transl_table=11 NC_008149.1 RefSeq gene 2452939 2453847 . + . ID=gene2281;Name=YPN_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11410;old_locus_tag=YPN_2169 NC_008149.1 Protein Homology CDS 2452939 2453847 . + 0 ID=cds2219;Parent=gene2281;Dbxref=Genbank:WP_002209739.1;Name=WP_002209739.1;gbkey=CDS;product=epimerase;protein_id=WP_002209739.1;transl_table=11 NC_008149.1 RefSeq gene 2453971 2454768 . - . ID=gene2282;Name=YPN_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11415;old_locus_tag=YPN_2170 NC_008149.1 Protein Homology CDS 2453971 2454768 . - 0 ID=cds2220;Parent=gene2282;Dbxref=Genbank:WP_002209738.1;Name=WP_002209738.1;gbkey=CDS;product=histidine ABC transporter ATP-binding protein;protein_id=WP_002209738.1;transl_table=11 NC_008149.1 RefSeq gene 2454782 2455498 . - . ID=gene2283;Name=YPN_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11420;old_locus_tag=YPN_2171 NC_008149.1 Protein Homology CDS 2454782 2455498 . - 0 ID=cds2221;Parent=gene2283;Dbxref=Genbank:WP_002209737.1;Name=WP_002209737.1;Note=with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisM;protein_id=WP_002209737.1;transl_table=11 NC_008149.1 RefSeq gene 2455495 2456181 . - . ID=gene2284;Name=YPN_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11425;old_locus_tag=YPN_2172 NC_008149.1 Protein Homology CDS 2455495 2456181 . - 0 ID=cds2222;Parent=gene2284;Dbxref=Genbank:WP_002209736.1;Name=WP_002209736.1;Note=with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine;gbkey=CDS;product=histidine/lysine/arginine/ornithine ABC transporter permease HisQ;protein_id=WP_002209736.1;transl_table=11 NC_008149.1 RefSeq gene 2456284 2457066 . - . ID=gene2285;Name=YPN_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11430;old_locus_tag=YPN_2173 NC_008149.1 Protein Homology CDS 2456284 2457066 . - 0 ID=cds2223;Parent=gene2285;Dbxref=Genbank:WP_002216029.1;Name=WP_002216029.1;Note=with HisPMQ is involved in the transport of histidine;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002216029.1;transl_table=11 NC_008149.1 RefSeq gene 2457591 2458163 . - . ID=gene2286;Name=YPN_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11435;old_locus_tag=YPN_2174 NC_008149.1 Protein Homology CDS 2457591 2458163 . - 0 ID=cds2224;Parent=gene2286;Dbxref=Genbank:WP_002209734.1;Name=WP_002209734.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_002209734.1;transl_table=11 NC_008149.1 RefSeq gene 2458410 2459927 . - . ID=gene2287;Name=YPN_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11440;old_locus_tag=YPN_2175 NC_008149.1 Protein Homology CDS 2458410 2459927 . - 0 ID=cds2225;Parent=gene2287;Dbxref=Genbank:WP_002209733.1;Name=WP_002209733.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11 NC_008149.1 RefSeq gene 2459940 2460449 . - . ID=gene2288;Name=YPN_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11445;old_locus_tag=YPN_2176 NC_008149.1 Protein Homology CDS 2459940 2460449 . - 0 ID=cds2226;Parent=gene2288;Dbxref=Genbank:WP_002209732.1;Name=WP_002209732.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11 NC_008149.1 RefSeq gene 2460761 2461483 . - . ID=gene2289;Name=YPN_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11450;old_locus_tag=YPN_2177 NC_008149.1 Protein Homology CDS 2460761 2461483 . - 0 ID=cds2227;Parent=gene2289;Dbxref=Genbank:WP_002209731.1;Name=WP_002209731.1;gbkey=CDS;product=cell division protein DedD;protein_id=WP_002209731.1;transl_table=11 NC_008149.1 RefSeq gene 2461603 2462907 . - . ID=gene2290;Name=YPN_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11455;old_locus_tag=YPN_2178 NC_008149.1 Protein Homology CDS 2461603 2462907 . - 0 ID=cds2228;Parent=gene2290;Dbxref=Genbank:WP_002209730.1;Name=WP_002209730.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_002209730.1;transl_table=11 NC_008149.1 RefSeq gene 2463156 2464070 . - . ID=gene2291;Name=YPN_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11460;old_locus_tag=YPN_2179 NC_008149.1 Protein Homology CDS 2463156 2464070 . - 0 ID=cds2229;Parent=gene2291;Dbxref=Genbank:WP_002228520.1;Name=WP_002228520.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_002228520.1;transl_table=11 NC_008149.1 RefSeq gene 2464301 2464963 . - . ID=gene2292;Name=YPN_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11465;old_locus_tag=YPN_2180 NC_008149.1 Protein Homology CDS 2464301 2464963 . - 0 ID=cds2230;Parent=gene2292;Dbxref=Genbank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209728.1;transl_table=11 NC_008149.1 RefSeq gene 2465120 2465950 . - . ID=gene2293;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=YPN_RS11470;old_locus_tag=YPN_2181 NC_008149.1 Protein Homology CDS 2465120 2465950 . - 0 ID=cds2231;Parent=gene2293;Dbxref=Genbank:WP_032465663.1;Name=WP_032465663.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_032465663.1;transl_table=11 NC_008149.1 RefSeq gene 2466001 2467011 . - . ID=gene2294;Name=YPN_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11475;old_locus_tag=YPN_2182 NC_008149.1 Protein Homology CDS 2466001 2467011 . - 0 ID=cds2232;Parent=gene2294;Dbxref=Genbank:WP_002209726.1;Name=WP_002209726.1;gbkey=CDS;product=semialdehyde dehydrogenase;protein_id=WP_002209726.1;transl_table=11 NC_008149.1 RefSeq gene 2467181 2468308 . - . ID=gene2295;Name=YPN_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11480;old_locus_tag=YPN_2183 NC_008149.1 Protein Homology CDS 2467181 2468308 . - 0 ID=cds2233;Parent=gene2295;Dbxref=Genbank:WP_002209725.1;Name=WP_002209725.1;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=WP_002209725.1;transl_table=11 NC_008149.1 RefSeq gene 2468355 2469140 . - . ID=gene2296;Name=YPN_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11485;old_locus_tag=YPN_2184 NC_008149.1 Protein Homology CDS 2468355 2469140 . - 0 ID=cds2234;Parent=gene2296;Dbxref=Genbank:WP_002209724.1;Name=WP_002209724.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209724.1;transl_table=11 NC_008149.1 RefSeq gene 2469127 2469288 . - . ID=gene2297;Name=YPN_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11490 NC_008149.1 Protein Homology CDS 2469127 2469288 . - 0 ID=cds2235;Parent=gene2297;Dbxref=Genbank:WP_002209723.1;Name=WP_002209723.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209723.1;transl_table=11 NC_008149.1 RefSeq gene 2469366 2470283 . + . ID=gene2298;Name=YPN_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11495;old_locus_tag=YPN_2185 NC_008149.1 Protein Homology CDS 2469366 2470283 . + 0 ID=cds2236;Parent=gene2298;Dbxref=Genbank:WP_002209722.1;Name=WP_002209722.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002209722.1;transl_table=11 NC_008149.1 RefSeq gene 2470568 2471605 . + . ID=gene2299;Name=YPN_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11500;old_locus_tag=YPN_2186 NC_008149.1 Protein Homology CDS 2470568 2471605 . + 0 ID=cds2237;Parent=gene2299;Dbxref=Genbank:WP_002209721.1;Name=WP_002209721.1;gbkey=CDS;product=flagella biosynthesis regulator;protein_id=WP_002209721.1;transl_table=11 NC_008149.1 RefSeq gene 2471947 2472477 . - . ID=gene2300;Name=YPN_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11505;old_locus_tag=YPN_2187 NC_008149.1 Protein Homology CDS 2471947 2472477 . - 0 ID=cds2238;Parent=gene2300;Dbxref=Genbank:WP_002209720.1;Name=WP_002209720.1;gbkey=CDS;product=fimbria A protein;protein_id=WP_002209720.1;transl_table=11 NC_008149.1 RefSeq gene 2473268 2473960 . + . ID=gene2301;Name=YPN_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11510;old_locus_tag=YPN_2188 NC_008149.1 Protein Homology CDS 2473268 2473960 . + 0 ID=cds2239;Parent=gene2301;Dbxref=Genbank:WP_002209718.1;Name=WP_002209718.1;gbkey=CDS;product=racemase;protein_id=WP_002209718.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2474133 2474303 . + . ID=id204;gbkey=repeat_region NC_008149.1 RefSeq gene 2474368 2475591 . - . ID=gene2302;Name=YPN_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11515;old_locus_tag=YPN_2189 NC_008149.1 Protein Homology CDS 2474368 2475591 . - 0 ID=cds2240;Parent=gene2302;Dbxref=Genbank:WP_002209717.1;Name=WP_002209717.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_002209717.1;transl_table=11 NC_008149.1 RefSeq gene 2475763 2477832 . + . ID=gene2303;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=YPN_RS11520;old_locus_tag=YPN_2190 NC_008149.1 Protein Homology CDS 2475763 2477832 . + 0 ID=cds2241;Parent=gene2303;Dbxref=Genbank:WP_002209716.1;Name=WP_002209716.1;Note=5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme;gbkey=CDS;gene=mnmC;product=tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;protein_id=WP_002209716.1;transl_table=11 NC_008149.1 RefSeq gene 2478010 2478288 . - . ID=gene2304;Name=YPN_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11525;old_locus_tag=YPN_2191 NC_008149.1 Protein Homology CDS 2478010 2478288 . - 0 ID=cds2242;Parent=gene2304;Dbxref=Genbank:WP_002209715.1;Name=WP_002209715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209715.1;transl_table=11 NC_008149.1 RefSeq gene 2478346 2478888 . - . ID=gene2305;Name=YPN_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11530;old_locus_tag=YPN_2192 NC_008149.1 Protein Homology CDS 2478346 2478888 . - 0 ID=cds2243;Parent=gene2305;Dbxref=Genbank:WP_002209714.1;Name=WP_002209714.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209714.1;transl_table=11 NC_008149.1 RefSeq gene 2478988 2479794 . - . ID=gene2306;Name=YPN_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11535;old_locus_tag=YPN_2193 NC_008149.1 Protein Homology CDS 2478988 2479794 . - 0 ID=cds2244;Parent=gene2306;Dbxref=Genbank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209713.1;transl_table=11 NC_008149.1 RefSeq gene 2479798 2480625 . - . ID=gene2307;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=YPN_RS11540;old_locus_tag=YPN_2194 NC_008149.1 Protein Homology CDS 2479798 2480625 . - 0 ID=cds2245;Parent=gene2307;Dbxref=Genbank:WP_002225365.1;Name=WP_002225365.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=WP_002225365.1;transl_table=11 NC_008149.1 RefSeq gene 2480631 2481716 . - . ID=gene2308;Name=YPN_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11545;old_locus_tag=YPN_2195 NC_008149.1 Protein Homology CDS 2480631 2481716 . - 0 ID=cds2246;Parent=gene2308;Dbxref=Genbank:WP_002209711.1;Name=WP_002209711.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;product=chorismate synthase;protein_id=WP_002209711.1;transl_table=11 NC_008149.1 RefSeq gene 2481793 2482725 . - . ID=gene2309;Name=YPN_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11550;old_locus_tag=YPN_2196 NC_008149.1 Protein Homology CDS 2481793 2482725 . - 0 ID=cds2247;Parent=gene2309;Dbxref=Genbank:WP_002209710.1;Name=WP_002209710.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=50S ribosomal protein L3 glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11 NC_008149.1 RefSeq gene 2483095 2483625 . + . ID=gene2310;Name=YPN_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11555;old_locus_tag=YPN_2197 NC_008149.1 Protein Homology CDS 2483095 2483625 . + 0 ID=cds2248;Parent=gene2310;Dbxref=Genbank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;product=peptidase S10;protein_id=WP_002227846.1;transl_table=11 NC_008149.1 RefSeq gene 2483790 2483945 . - . ID=gene2311;Name=YPN_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11560 NC_008149.1 Protein Homology CDS 2483790 2483945 . - 0 ID=cds2249;Parent=gene2311;Dbxref=Genbank:WP_011171883.1;Name=WP_011171883.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171883.1;transl_table=11 NC_008149.1 RefSeq gene 2484091 2484582 . - . ID=gene2312;Name=YPN_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11565;old_locus_tag=YPN_2199 NC_008149.1 Protein Homology CDS 2484091 2484582 . - 0 ID=cds2250;Parent=gene2312;Dbxref=Genbank:WP_002209707.1;Name=WP_002209707.1;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=WP_002209707.1;transl_table=11 NC_008149.1 RefSeq gene 2485151 2487475 . - . ID=gene2313;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=YPN_RS11570;old_locus_tag=YPN_2200 NC_008149.1 Protein Homology CDS 2485151 2487475 . - 0 ID=cds2251;Parent=gene2313;Dbxref=Genbank:WP_002209705.1;Name=WP_002209705.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=fatty acid oxidation complex subunit alpha;protein_id=WP_002209705.1;transl_table=11 NC_008149.1 RefSeq gene 2487475 2488785 . - . ID=gene2314;Name=YPN_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11575;old_locus_tag=YPN_2201 NC_008149.1 Protein Homology CDS 2487475 2488785 . - 0 ID=cds2252;Parent=gene2314;Dbxref=Genbank:WP_002209704.1;Name=WP_002209704.1;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=WP_002209704.1;transl_table=11 NC_008149.1 RefSeq gene 2489072 2489356 . - . ID=gene2315;Name=YPN_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11580;old_locus_tag=YPN_2202 NC_008149.1 Protein Homology CDS 2489072 2489356 . - 0 ID=cds2253;Parent=gene2315;Dbxref=Genbank:WP_025470754.1;Name=WP_025470754.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025470754.1;transl_table=11 NC_008149.1 RefSeq gene 2489782 2491047 . + . ID=gene2316;Name=YPN_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11585;old_locus_tag=YPN_2203 NC_008149.1 Protein Homology CDS 2489782 2491047 . + 0 ID=cds2254;Parent=gene2316;Dbxref=Genbank:WP_002209702.1;Name=WP_002209702.1;gbkey=CDS;product=long-chain fatty acid outer membrane transporter;protein_id=WP_002209702.1;transl_table=11 NC_008149.1 RefSeq gene 2491154 2491918 . - . ID=gene2317;Name=YPN_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11590;old_locus_tag=YPN_2204 NC_008149.1 Protein Homology CDS 2491154 2491918 . - 0 ID=cds2255;Parent=gene2317;Dbxref=Genbank:WP_002209701.1;Name=WP_002209701.1;Note=involved in maintaining OM lipid asymmetry;gbkey=CDS;product=membrane protein;protein_id=WP_002209701.1;transl_table=11 NC_008149.1 RefSeq gene 2491954 2493180 . - . ID=gene2318;Name=YPN_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11595;old_locus_tag=YPN_2205 NC_008149.1 Protein Homology CDS 2491954 2493180 . - 0 ID=cds2256;Parent=gene2318;Dbxref=Genbank:WP_002209700.1;Name=WP_002209700.1;gbkey=CDS;product=cytochrome C;protein_id=WP_002209700.1;transl_table=11 NC_008149.1 RefSeq gene 2493180 2493692 . - . ID=gene2319;Name=YPN_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11600;old_locus_tag=YPN_2206 NC_008149.1 Protein Homology CDS 2493180 2493692 . - 0 ID=cds2257;Parent=gene2319;Dbxref=Genbank:WP_002214855.1;Name=WP_002214855.1;gbkey=CDS;product=cytochrome C biogenesis protein;protein_id=WP_002214855.1;transl_table=11 NC_008149.1 RefSeq gene 2493697 2494254 . - . ID=gene2320;Name=YPN_RS11605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS11605;old_locus_tag=YPN_2207;partial=true;pseudo=true;start_range=.,2493697 NC_008149.1 Protein Homology CDS 2493697 2494254 . - 0 ID=cds2258;Parent=gene2320;Note=cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=disulfide bond formation protein DsbE;pseudo=true;start_range=.,2493697;transl_table=11 NC_008149.1 RefSeq gene 2494251 2496221 . - . ID=gene2321;Name=YPN_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11610;old_locus_tag=YPN_2208 NC_008149.1 Protein Homology CDS 2494251 2496221 . - 0 ID=cds2259;Parent=gene2321;Dbxref=Genbank:WP_002209698.1;Name=WP_002209698.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;product=heme lyase subunit CcmF;protein_id=WP_002209698.1;transl_table=11 NC_008149.1 RefSeq gene 2496218 2496712 . - . ID=gene2322;Name=YPN_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11615;old_locus_tag=YPN_2209 NC_008149.1 Protein Homology CDS 2496218 2496712 . - 0 ID=cds2260;Parent=gene2322;Dbxref=Genbank:WP_002209697.1;Name=WP_002209697.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=WP_002209697.1;transl_table=11 NC_008149.1 RefSeq gene 2496709 2497011 . - . ID=gene2323;Name=YPN_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11620;old_locus_tag=YPN_2210 NC_008149.1 Protein Homology CDS 2496709 2497011 . - 0 ID=cds2261;Parent=gene2323;Dbxref=Genbank:WP_002209696.1;Name=WP_002209696.1;gbkey=CDS;product=heme exporter protein D;protein_id=WP_002209696.1;transl_table=11 NC_008149.1 RefSeq gene 2497008 2497745 . - . ID=gene2324;Name=YPN_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11625;old_locus_tag=YPN_2211 NC_008149.1 Protein Homology CDS 2497008 2497745 . - 0 ID=cds2262;Parent=gene2324;Dbxref=Genbank:WP_002209695.1;Name=WP_002209695.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;product=heme exporter protein C;protein_id=WP_002209695.1;transl_table=11 NC_008149.1 RefSeq gene 2497808 2498467 . - . ID=gene2325;Name=YPN_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11630;old_locus_tag=YPN_2212 NC_008149.1 Protein Homology CDS 2497808 2498467 . - 0 ID=cds2263;Parent=gene2325;Dbxref=Genbank:WP_002209694.1;Name=WP_002209694.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;product=heme exporter protein B;protein_id=WP_002209694.1;transl_table=11 NC_008149.1 RefSeq gene 2498437 2499093 . - . ID=gene2326;Name=YPN_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11635;old_locus_tag=YPN_2213 NC_008149.1 Protein Homology CDS 2498437 2499093 . - 0 ID=cds2264;Parent=gene2326;Dbxref=Genbank:WP_002209693.1;Name=WP_002209693.1;gbkey=CDS;product=cytochrome c biogenesis ATP-binding export protein CcmA;protein_id=WP_002209693.1;transl_table=11 NC_008149.1 RefSeq gene 2499538 2500005 . - . ID=gene2327;Name=YPN_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11640;old_locus_tag=YPN_2214 NC_008149.1 Protein Homology CDS 2499538 2500005 . - 0 ID=cds2265;Parent=gene2327;Dbxref=Genbank:WP_002209692.1;Name=WP_002209692.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209692.1;transl_table=11 NC_008149.1 RefSeq gene 2500260 2500334 . - . ID=gene2328;Name=YPN_RS11645;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS11645;old_locus_tag=YPN_r067 NC_008149.1 tRNAscan-SE tRNA 2500260 2500334 . - . ID=rna59;Parent=gene2328;anticodon=(pos:complement(2500299..2500301));gbkey=tRNA;product=tRNA-Arg NC_008149.1 tRNAscan-SE exon 2500260 2500334 . - . ID=id205;Parent=rna59;anticodon=(pos:complement(2500299..2500301));gbkey=tRNA;product=tRNA-Arg NC_008149.1 RefSeq gene 2500621 2501163 . + . ID=gene2329;Name=YPN_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11650;old_locus_tag=YPN_2215 NC_008149.1 Protein Homology CDS 2500621 2501163 . + 0 ID=cds2266;Parent=gene2329;Dbxref=Genbank:WP_002209691.1;Name=WP_002209691.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209691.1;transl_table=11 NC_008149.1 RefSeq gene 2501168 2503207 . + . ID=gene2330;Name=YPN_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11655;old_locus_tag=YPN_2216 NC_008149.1 Protein Homology CDS 2501168 2503207 . + 0 ID=cds2267;Parent=gene2330;Dbxref=Genbank:WP_002209690.1;Name=WP_002209690.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209690.1;transl_table=11 NC_008149.1 RefSeq gene 2503583 2503924 . + . ID=gene2331;Name=YPN_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11660;old_locus_tag=YPN_2217 NC_008149.1 Protein Homology CDS 2503583 2503924 . + 0 ID=cds2268;Parent=gene2331;Dbxref=Genbank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209688.1;transl_table=11 NC_008149.1 RefSeq gene 2503999 2504346 . - . ID=gene2332;Name=YPN_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11665;old_locus_tag=YPN_2218 NC_008149.1 Protein Homology CDS 2503999 2504346 . - 0 ID=cds2269;Parent=gene2332;Dbxref=Genbank:WP_002209687.1;Name=WP_002209687.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209687.1;transl_table=11 NC_008149.1 RefSeq gene 2504371 2504850 . - . ID=gene2333;Name=YPN_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11670;old_locus_tag=YPN_2219 NC_008149.1 Protein Homology CDS 2504371 2504850 . - 0 ID=cds2270;Parent=gene2333;Dbxref=Genbank:WP_002209686.1;Name=WP_002209686.1;gbkey=CDS;product=lysozyme;protein_id=WP_002209686.1;transl_table=11 NC_008149.1 RefSeq gene 2504979 2505785 . - . ID=gene2334;Name=YPN_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11675;old_locus_tag=YPN_2220 NC_008149.1 Protein Homology CDS 2504979 2505785 . - 0 ID=cds2271;Parent=gene2334;Dbxref=Genbank:WP_002209685.1;Name=WP_002209685.1;gbkey=CDS;product=ImpE family protein;protein_id=WP_002209685.1;transl_table=11 NC_008149.1 RefSeq gene 2505805 2506647 . - . ID=gene2335;Name=YPN_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11680;old_locus_tag=YPN_2221 NC_008149.1 Protein Homology CDS 2505805 2506647 . - 0 ID=cds2272;Parent=gene2335;Dbxref=Genbank:WP_002354537.1;Name=WP_002354537.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002354537.1;transl_table=11 NC_008149.1 RefSeq gene 2506653 2506913 . - . ID=gene2336;Name=YPN_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11685 NC_008149.1 Protein Homology CDS 2506653 2506913 . - 0 ID=cds2273;Parent=gene2336;Dbxref=Genbank:WP_002209684.1;Name=WP_002209684.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209684.1;transl_table=11 NC_008149.1 RefSeq gene 2507012 2509582 . - . ID=gene2337;Name=YPN_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11690;old_locus_tag=YPN_2222 NC_008149.1 Protein Homology CDS 2507012 2509582 . - 0 ID=cds2274;Parent=gene2337;Dbxref=Genbank:WP_002265157.1;Name=WP_002265157.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002265157.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2507054 2507153 . + . ID=id206;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 2507270 2507369 . + . ID=id207;gbkey=repeat_region NC_008149.1 RefSeq gene 2509909 2513736 . - . ID=gene2338;Name=YPN_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11695;old_locus_tag=YPN_2223 NC_008149.1 Protein Homology CDS 2509909 2513736 . - 0 ID=cds2275;Parent=gene2338;Dbxref=Genbank:WP_002214843.1;Name=WP_002214843.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_002214843.1;transl_table=11 NC_008149.1 RefSeq gene 2513745 2514581 . - . ID=gene2339;Name=YPN_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11700;old_locus_tag=YPN_2224 NC_008149.1 Protein Homology CDS 2513745 2514581 . - 0 ID=cds2276;Parent=gene2339;Dbxref=Genbank:WP_002209681.1;Name=WP_002209681.1;gbkey=CDS;product=polymerase;protein_id=WP_002209681.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2514522 2516487 . + . ID=id208;gbkey=repeat_region NC_008149.1 RefSeq gene 2514597 2515376 . - . ID=gene2340;Name=YPN_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11705;old_locus_tag=YPN_2225 NC_008149.1 Protein Homology CDS 2514597 2515376 . - 0 ID=cds2277;Parent=gene2340;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 2515376 2516398 . - . ID=gene2341;Name=YPN_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11710;old_locus_tag=YPN_2226 NC_008149.1 Protein Homology CDS 2515376 2516398 . - 0 ID=cds2278;Parent=gene2341;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 2516455 2516682 . + . ID=gene2342;Name=YPN_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11715 NC_008149.1 Protein Homology CDS 2516455 2516682 . + 0 ID=cds2279;Parent=gene2342;Dbxref=Genbank:WP_002215429.1;Name=WP_002215429.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215429.1;transl_table=11 NC_008149.1 RefSeq gene 2516666 2516788 . - . ID=gene2343;Name=YPN_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11720 NC_008149.1 Protein Homology CDS 2516666 2516788 . - 0 ID=cds2280;Parent=gene2343;Dbxref=Genbank:WP_002213181.1;Name=WP_002213181.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213181.1;transl_table=11 NC_008149.1 RefSeq gene 2516876 2517061 . + . ID=gene2344;Name=YPN_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11725 NC_008149.1 Protein Homology CDS 2516876 2517061 . + 0 ID=cds2281;Parent=gene2344;Dbxref=Genbank:WP_002215428.1;Name=WP_002215428.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215428.1;transl_table=11 NC_008149.1 RefSeq gene 2517077 2517301 . + . ID=gene2345;Name=YPN_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11730;old_locus_tag=YPN_2227 NC_008149.1 Protein Homology CDS 2517077 2517301 . + 0 ID=cds2282;Parent=gene2345;Dbxref=Genbank:WP_002213183.1;Name=WP_002213183.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213183.1;transl_table=11 NC_008149.1 RefSeq gene 2517311 2517463 . - . ID=gene2346;Name=YPN_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11735 NC_008149.1 Protein Homology CDS 2517311 2517463 . - 0 ID=cds2283;Parent=gene2346;Dbxref=Genbank:WP_002231175.1;Name=WP_002231175.1;gbkey=CDS;product=sugar ABC transporter ATPase;protein_id=WP_002231175.1;transl_table=11 NC_008149.1 RefSeq gene 2517538 2518428 . - . ID=gene2347;Name=YPN_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11740;old_locus_tag=YPN_2229 NC_008149.1 Protein Homology CDS 2517538 2518428 . - 0 ID=cds2284;Parent=gene2347;Dbxref=Genbank:WP_002215425.1;Name=WP_002215425.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002215425.1;transl_table=11 NC_008149.1 RefSeq gene 2518453 2519280 . - . ID=gene2348;Name=YPN_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11745;old_locus_tag=YPN_2230 NC_008149.1 Protein Homology CDS 2518453 2519280 . - 0 ID=cds2285;Parent=gene2348;Dbxref=Genbank:WP_002213186.1;Name=WP_002213186.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213186.1;transl_table=11 NC_008149.1 RefSeq gene 2519273 2520133 . - . ID=gene2349;Name=YPN_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11750;old_locus_tag=YPN_2231 NC_008149.1 Protein Homology CDS 2519273 2520133 . - 0 ID=cds2286;Parent=gene2349;Dbxref=Genbank:WP_002213188.1;Name=WP_002213188.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002213188.1;transl_table=11 NC_008149.1 RefSeq gene 2520200 2521468 . - . ID=gene2350;Name=YPN_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11755;old_locus_tag=YPN_2232 NC_008149.1 Protein Homology CDS 2520200 2521468 . - 0 ID=cds2287;Parent=gene2350;Dbxref=Genbank:WP_002213190.1;Name=WP_002213190.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002213190.1;transl_table=11 NC_008149.1 RefSeq gene 2521498 2522511 . - . ID=gene2351;Name=YPN_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11760;old_locus_tag=YPN_2233 NC_008149.1 Protein Homology CDS 2521498 2522511 . - 0 ID=cds2288;Parent=gene2351;Dbxref=Genbank:WP_002213192.1;Name=WP_002213192.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002213192.1;transl_table=11 NC_008149.1 RefSeq gene 2522919 2523203 . + . ID=gene2352;Name=YPN_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11765 NC_008149.1 Protein Homology CDS 2522919 2523203 . + 0 ID=cds2289;Parent=gene2352;Dbxref=Genbank:WP_002228532.1;Name=WP_002228532.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002228532.1;transl_table=11 NC_008149.1 RefSeq gene 2523173 2523970 . - . ID=gene2353;Name=YPN_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11770;old_locus_tag=YPN_2235 NC_008149.1 Protein Homology CDS 2523173 2523970 . - 0 ID=cds2290;Parent=gene2353;Dbxref=Genbank:WP_002213201.1;Name=WP_002213201.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002213201.1;transl_table=11 NC_008149.1 RefSeq gene 2524157 2524261 . - . ID=gene2354;Name=YPN_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11775 NC_008149.1 Protein Homology CDS 2524157 2524261 . - 0 ID=cds2291;Parent=gene2354;Dbxref=Genbank:WP_002215419.1;Name=WP_002215419.1;gbkey=CDS;product=transposase;protein_id=WP_002215419.1;transl_table=11 NC_008149.1 RefSeq gene 2524939 2525373 . + . ID=gene2355;Name=YPN_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11785;old_locus_tag=YPN_2238 NC_008149.1 Protein Homology CDS 2524939 2525373 . + 0 ID=cds2292;Parent=gene2355;Dbxref=Genbank:WP_002215417.1;Name=WP_002215417.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215417.1;transl_table=11 NC_008149.1 RefSeq gene 2525385 2525954 . + . ID=gene2356;Name=YPN_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11790;old_locus_tag=YPN_2239 NC_008149.1 Protein Homology CDS 2525385 2525954 . + 0 ID=cds2293;Parent=gene2356;Dbxref=Genbank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11 NC_008149.1 RefSeq gene 2526372 2527570 . - . ID=gene2357;Name=YPN_RS11795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS11795;old_locus_tag=YPN_2241;pseudo=true NC_008149.1 Protein Homology CDS 2526372 2527570 . - 0 ID=cds2294;Parent=gene2357;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_008149.1 RefSeq repeat_region 2527410 2527641 . + . ID=id209;gbkey=repeat_region NC_008149.1 RefSeq gene 2527618 2528694 . - . ID=gene2358;Name=YPN_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11800;old_locus_tag=YPN_2242 NC_008149.1 Protein Homology CDS 2527618 2528694 . - 0 ID=cds2295;Parent=gene2358;Dbxref=Genbank:WP_002213208.1;Name=WP_002213208.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213208.1;transl_table=11 NC_008149.1 RefSeq gene 2528760 2529050 . - . ID=gene2359;Name=YPN_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11805;old_locus_tag=YPN_2243 NC_008149.1 Protein Homology CDS 2528760 2529050 . - 0 ID=cds2296;Parent=gene2359;Dbxref=Genbank:WP_002213209.1;Name=WP_002213209.1;gbkey=CDS;product=antitoxin;protein_id=WP_002213209.1;transl_table=11 NC_008149.1 RefSeq gene 2529031 2529303 . - . ID=gene2360;Name=YPN_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11810;old_locus_tag=YPN_2244 NC_008149.1 Protein Homology CDS 2529031 2529303 . - 0 ID=cds2297;Parent=gene2360;Dbxref=Genbank:WP_002213210.1;Name=WP_002213210.1;gbkey=CDS;product=toxin;protein_id=WP_002213210.1;transl_table=11 NC_008149.1 RefSeq gene 2529439 2529693 . + . ID=gene2361;Name=YPN_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11815;old_locus_tag=YPN_2245 NC_008149.1 Protein Homology CDS 2529439 2529693 . + 0 ID=cds2298;Parent=gene2361;Dbxref=Genbank:WP_002213211.1;Name=WP_002213211.1;gbkey=CDS;product=phage baseplate protein;protein_id=WP_002213211.1;transl_table=11 NC_008149.1 RefSeq gene 2529690 2529989 . + . ID=gene2362;Name=YPN_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11820;old_locus_tag=YPN_2246 NC_008149.1 Protein Homology CDS 2529690 2529989 . + 0 ID=cds2299;Parent=gene2362;Dbxref=Genbank:WP_002213212.1;Name=WP_002213212.1;gbkey=CDS;product=lysozyme;protein_id=WP_002213212.1;transl_table=11 NC_008149.1 RefSeq gene 2530006 2530293 . + . ID=gene2363;Name=YPN_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11825;old_locus_tag=YPN_2247 NC_008149.1 Protein Homology CDS 2530006 2530293 . + 0 ID=cds2300;Parent=gene2363;Dbxref=Genbank:WP_002215413.1;Name=WP_002215413.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215413.1;transl_table=11 NC_008149.1 RefSeq gene 2530728 2530943 . + . ID=gene2364;Name=YPN_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11830 NC_008149.1 Protein Homology CDS 2530728 2530943 . + 0 ID=cds2301;Parent=gene2364;Dbxref=Genbank:WP_002215412.1;Name=WP_002215412.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215412.1;transl_table=11 NC_008149.1 RefSeq gene 2530940 2531245 . + . ID=gene2365;Name=YPN_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11835;old_locus_tag=YPN_2248 NC_008149.1 Protein Homology CDS 2530940 2531245 . + 0 ID=cds2302;Parent=gene2365;Dbxref=Genbank:WP_002215411.1;Name=WP_002215411.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215411.1;transl_table=11 NC_008149.1 RefSeq gene 2531226 2531504 . + . ID=gene2366;Name=YPN_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11840 NC_008149.1 Protein Homology CDS 2531226 2531504 . + 0 ID=cds2303;Parent=gene2366;Dbxref=Genbank:WP_002215410.1;Name=WP_002215410.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215410.1;transl_table=11 NC_008149.1 RefSeq gene 2531669 2531809 . + . ID=gene2367;Name=YPN_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11845;old_locus_tag=YPN_2249 NC_008149.1 Protein Homology CDS 2531669 2531809 . + 0 ID=cds2304;Parent=gene2367;Dbxref=Genbank:WP_002213214.1;Name=WP_002213214.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213214.1;transl_table=11 NC_008149.1 RefSeq gene 2531857 2532339 . + . ID=gene2368;Name=YPN_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11850;old_locus_tag=YPN_2250 NC_008149.1 Protein Homology CDS 2531857 2532339 . + 0 ID=cds2305;Parent=gene2368;Dbxref=Genbank:WP_032465626.1;Name=WP_032465626.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_032465626.1;transl_table=11 NC_008149.1 RefSeq gene 2532411 2533370 . + . ID=gene2369;Name=YPN_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11855;old_locus_tag=YPN_2251 NC_008149.1 Protein Homology CDS 2532411 2533370 . + 0 ID=cds2306;Parent=gene2369;Dbxref=Genbank:WP_002213218.1;Name=WP_002213218.1;gbkey=CDS;product=transposase;protein_id=WP_002213218.1;transl_table=11 NC_008149.1 RefSeq gene 2533590 2533934 . + . ID=gene2370;Name=YPN_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11860;old_locus_tag=YPN_2252 NC_008149.1 Protein Homology CDS 2533590 2533934 . + 0 ID=cds2307;Parent=gene2370;Dbxref=Genbank:WP_002215406.1;Name=WP_002215406.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215406.1;transl_table=11 NC_008149.1 RefSeq gene 2533960 2534139 . + . ID=gene2371;Name=YPN_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11865;old_locus_tag=YPN_2253 NC_008149.1 Protein Homology CDS 2533960 2534139 . + 0 ID=cds2308;Parent=gene2371;Dbxref=Genbank:WP_002226821.1;Name=WP_002226821.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002226821.1;transl_table=11 NC_008149.1 RefSeq gene 2534169 2534351 . - . ID=gene2372;Name=YPN_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11870 NC_008149.1 Protein Homology CDS 2534169 2534351 . - 0 ID=cds2309;Parent=gene2372;Dbxref=Genbank:WP_002213223.1;Name=WP_002213223.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213223.1;transl_table=11 NC_008149.1 RefSeq gene 2534961 2535083 . - . ID=gene2373;Name=YPN_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11875 NC_008149.1 Protein Homology CDS 2534961 2535083 . - 0 ID=cds2310;Parent=gene2373;Dbxref=Genbank:WP_002213228.1;Name=WP_002213228.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213228.1;transl_table=11 NC_008149.1 RefSeq gene 2535476 2535703 . - . ID=gene2374;Name=YPN_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11880;old_locus_tag=YPN_2255 NC_008149.1 Protein Homology CDS 2535476 2535703 . - 0 ID=cds2311;Parent=gene2374;Dbxref=Genbank:WP_002215401.1;Name=WP_002215401.1;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002215401.1;transl_table=11 NC_008149.1 RefSeq gene 2535814 2536329 . + . ID=gene2375;Name=YPN_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11885;old_locus_tag=YPN_2256 NC_008149.1 Protein Homology CDS 2535814 2536329 . + 0 ID=cds2312;Parent=gene2375;Dbxref=Genbank:WP_002215399.1;Name=WP_002215399.1;gbkey=CDS;product=integrase;protein_id=WP_002215399.1;transl_table=11 NC_008149.1 RefSeq gene 2536627 2536712 . - . ID=gene2376;Name=YPN_RS11890;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS11890;old_locus_tag=YPN_r068 NC_008149.1 tRNAscan-SE tRNA 2536627 2536712 . - . ID=rna60;Parent=gene2376;anticodon=(pos:complement(2536676..2536678));gbkey=tRNA;product=tRNA-Leu NC_008149.1 tRNAscan-SE exon 2536627 2536712 . - . ID=id210;Parent=rna60;anticodon=(pos:complement(2536676..2536678));gbkey=tRNA;product=tRNA-Leu NC_008149.1 RefSeq gene 2536723 2536796 . - . ID=gene2377;Name=YPN_RS11895;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS11895;old_locus_tag=YPN_r069 NC_008149.1 tRNAscan-SE tRNA 2536723 2536796 . - . ID=rna61;Parent=gene2377;anticodon=(pos:complement(2536762..2536764));gbkey=tRNA;product=tRNA-Cys NC_008149.1 tRNAscan-SE exon 2536723 2536796 . - . ID=id211;Parent=rna61;anticodon=(pos:complement(2536762..2536764));gbkey=tRNA;product=tRNA-Cys NC_008149.1 RefSeq gene 2536849 2536924 . - . ID=gene2378;Name=YPN_RS11900;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS11900;old_locus_tag=YPN_r070 NC_008149.1 tRNAscan-SE tRNA 2536849 2536924 . - . ID=rna62;Parent=gene2378;anticodon=(pos:complement(2536889..2536891));gbkey=tRNA;product=tRNA-Gly NC_008149.1 tRNAscan-SE exon 2536849 2536924 . - . ID=id212;Parent=rna62;anticodon=(pos:complement(2536889..2536891));gbkey=tRNA;product=tRNA-Gly NC_008149.1 RefSeq gene 2537069 2537617 . - . ID=gene2379;Name=YPN_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11905;old_locus_tag=YPN_2257 NC_008149.1 Protein Homology CDS 2537069 2537617 . - 0 ID=cds2313;Parent=gene2379;Dbxref=Genbank:WP_002220475.1;Name=WP_002220475.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002220475.1;transl_table=11 NC_008149.1 RefSeq gene 2537676 2539508 . - . ID=gene2380;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=YPN_RS11910;old_locus_tag=YPN_2258 NC_008149.1 Protein Homology CDS 2537676 2539508 . - 0 ID=cds2314;Parent=gene2380;Dbxref=Genbank:WP_002220477.1;Name=WP_002220477.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=UvrABC system protein C;protein_id=WP_002220477.1;transl_table=11 NC_008149.1 RefSeq gene 2539501 2540157 . - . ID=gene2381;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;gene_synonym=uvrY;locus_tag=YPN_RS11915;old_locus_tag=YPN_2259 NC_008149.1 Protein Homology CDS 2539501 2540157 . - 0 ID=cds2315;Parent=gene2381;Dbxref=Genbank:WP_002211176.1;Name=WP_002211176.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=sirA;product=transcriptional regulator;protein_id=WP_002211176.1;transl_table=11 NC_008149.1 RefSeq gene 2540820 2541044 . + . ID=gene2382;Name=YPN_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11920;old_locus_tag=YPN_2260 NC_008149.1 Protein Homology CDS 2540820 2541044 . + 0 ID=cds2316;Parent=gene2382;Dbxref=Genbank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211175.1;transl_table=11 NC_008149.1 RefSeq gene 2541172 2541513 . + . ID=gene2383;Name=YPN_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11925;old_locus_tag=YPN_2261 NC_008149.1 Protein Homology CDS 2541172 2541513 . + 0 ID=cds2317;Parent=gene2383;Dbxref=Genbank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;product=membrane protein;protein_id=WP_002218408.1;transl_table=11 NC_008149.1 RefSeq gene 2541541 2541795 . - . ID=gene2384;Name=YPN_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11930;old_locus_tag=YPN_2262 NC_008149.1 Protein Homology CDS 2541541 2541795 . - 0 ID=cds2318;Parent=gene2384;Dbxref=Genbank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211173.1;transl_table=11 NC_008149.1 RefSeq gene 2541914 2542096 . + . ID=gene2385;Name=YPN_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11935 NC_008149.1 Protein Homology CDS 2541914 2542096 . + 0 ID=cds2319;Parent=gene2385;Dbxref=Genbank:WP_002218407.1;Name=WP_002218407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218407.1;transl_table=11 NC_008149.1 RefSeq gene 2542135 2542686 . - . ID=gene2386;Name=YPN_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11940;old_locus_tag=YPN_2263 NC_008149.1 Protein Homology CDS 2542135 2542686 . - 0 ID=cds2320;Parent=gene2386;Dbxref=Genbank:WP_002211172.1;Name=WP_002211172.1;gbkey=CDS;product=attachment invasion locus protein;protein_id=WP_002211172.1;transl_table=11 NC_008149.1 RefSeq gene 2543373 2543448 . - . ID=gene2387;Name=YPN_RS11945;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS11945;old_locus_tag=YPN_r071 NC_008149.1 tRNAscan-SE tRNA 2543373 2543448 . - . ID=rna63;Parent=gene2387;anticodon=(pos:complement(2543413..2543415));gbkey=tRNA;product=tRNA-Lys NC_008149.1 tRNAscan-SE exon 2543373 2543448 . - . ID=id213;Parent=rna63;anticodon=(pos:complement(2543413..2543415));gbkey=tRNA;product=tRNA-Lys NC_008149.1 RefSeq gene 2543801 2545225 . + . ID=gene2388;Name=YPN_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11950;old_locus_tag=YPN_2264 NC_008149.1 Protein Homology CDS 2543801 2545225 . + 0 ID=cds2321;Parent=gene2388;Dbxref=Genbank:WP_002220481.1;Name=WP_002220481.1;gbkey=CDS;product=alanine glycine permease;protein_id=WP_002220481.1;transl_table=11 NC_008149.1 RefSeq gene 2545351 2546529 . - . ID=gene2389;Name=YPN_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11955;old_locus_tag=YPN_2265 NC_008149.1 Protein Homology CDS 2545351 2546529 . - 0 ID=cds2322;Parent=gene2389;Dbxref=Genbank:WP_002211169.1;Name=WP_002211169.1;gbkey=CDS;product=N-acetylneuraminate epimerase;protein_id=WP_002211169.1;transl_table=11 NC_008149.1 RefSeq gene 2546923 2547522 . + . ID=gene2390;Name=YPN_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11960;old_locus_tag=YPN_2266 NC_008149.1 Protein Homology CDS 2546923 2547522 . + 0 ID=cds2323;Parent=gene2390;Dbxref=Genbank:WP_002211168.1;Name=WP_002211168.1;Note=catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NAD(P)H dehydrogenase (quinone);protein_id=WP_002211168.1;transl_table=11 NC_008149.1 RefSeq gene 2547608 2548912 . - . ID=gene2391;Name=YPN_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11965;old_locus_tag=YPN_2267 NC_008149.1 Protein Homology CDS 2547608 2548912 . - 0 ID=cds2324;Parent=gene2391;Dbxref=Genbank:WP_002211167.1;Name=WP_002211167.1;gbkey=CDS;product=deferrochelatase/peroxidase EfeB;protein_id=WP_002211167.1;transl_table=11 NC_008149.1 RefSeq gene 2548923 2550053 . - . ID=gene2392;Name=YPN_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11970;old_locus_tag=YPN_2268 NC_008149.1 Protein Homology CDS 2548923 2550053 . - 0 ID=cds2325;Parent=gene2392;Dbxref=Genbank:WP_002211166.1;Name=WP_002211166.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;product=iron uptake system component EfeO;protein_id=WP_002211166.1;transl_table=11 NC_008149.1 RefSeq gene 2550083 2550931 . - . ID=gene2393;Name=YPN_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11975;old_locus_tag=YPN_2269 NC_008149.1 Protein Homology CDS 2550083 2550931 . - 0 ID=cds2326;Parent=gene2393;Dbxref=Genbank:WP_002211165.1;Name=WP_002211165.1;gbkey=CDS;product=ferrous iron permease EfeU;protein_id=WP_002211165.1;transl_table=11 NC_008149.1 RefSeq gene 2551264 2552748 . - . ID=gene2394;Name=YPN_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11980;old_locus_tag=YPN_2270 NC_008149.1 Protein Homology CDS 2551264 2552748 . - 0 ID=cds2327;Parent=gene2394;Dbxref=Genbank:WP_002211164.1;Name=WP_002211164.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;product=proline:sodium symporter;protein_id=WP_002211164.1;transl_table=11 NC_008149.1 RefSeq gene 2552778 2552975 . - . ID=gene2395;Name=YPN_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11985;old_locus_tag=YPN_2271 NC_008149.1 Protein Homology CDS 2552778 2552975 . - 0 ID=cds2328;Parent=gene2395;Dbxref=Genbank:WP_002211163.1;Name=WP_002211163.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211163.1;transl_table=11 NC_008149.1 RefSeq gene 2553320 2557291 . + . ID=gene2396;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=YPN_RS11990;old_locus_tag=YPN_2272 NC_008149.1 Protein Homology CDS 2553320 2557291 . + 0 ID=cds2329;Parent=gene2396;Dbxref=Genbank:WP_002224448.1;Name=WP_002224448.1;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;gbkey=CDS;gene=putA;product=bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase;protein_id=WP_002224448.1;transl_table=11 NC_008149.1 RefSeq gene 2557797 2558090 . + . ID=gene2397;Name=YPN_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS11995;old_locus_tag=YPN_2273 NC_008149.1 Protein Homology CDS 2557797 2558090 . + 0 ID=cds2330;Parent=gene2397;Dbxref=Genbank:WP_002211161.1;Name=WP_002211161.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211161.1;transl_table=11 NC_008149.1 RefSeq gene 2558090 2558461 . + . ID=gene2398;Name=YPN_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12000;old_locus_tag=YPN_2274 NC_008149.1 Protein Homology CDS 2558090 2558461 . + 0 ID=cds2331;Parent=gene2398;Dbxref=Genbank:WP_002223875.1;Name=WP_002223875.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002223875.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2558597 2558765 . + . ID=id214;gbkey=repeat_region NC_008149.1 RefSeq gene 2558753 2559514 . - . ID=gene2399;Name=YPN_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12005;old_locus_tag=YPN_2275 NC_008149.1 Protein Homology CDS 2558753 2559514 . - 0 ID=cds2332;Parent=gene2399;Dbxref=Genbank:WP_002211159.1;Name=WP_002211159.1;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002211159.1;transl_table=11 NC_008149.1 RefSeq gene 2559517 2560179 . - . ID=gene2400;Name=YPN_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12010;old_locus_tag=YPN_2276 NC_008149.1 Protein Homology CDS 2559517 2560179 . - 0 ID=cds2333;Parent=gene2400;Dbxref=Genbank:WP_002211158.1;Name=WP_002211158.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002211158.1;transl_table=11 NC_008149.1 RefSeq gene 2560179 2560979 . - . ID=gene2401;Name=YPN_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12015;old_locus_tag=YPN_2277 NC_008149.1 Protein Homology CDS 2560179 2560979 . - 0 ID=cds2334;Parent=gene2401;Dbxref=Genbank:WP_002211157.1;Name=WP_002211157.1;gbkey=CDS;product=cystine transporter subunit;protein_id=WP_002211157.1;transl_table=11 NC_008149.1 RefSeq gene 2561103 2562095 . - . ID=gene2402;Name=YPN_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12020;old_locus_tag=YPN_2278 NC_008149.1 Protein Homology CDS 2561103 2562095 . - 0 ID=cds2335;Parent=gene2402;Dbxref=Genbank:WP_002227959.1;Name=WP_002227959.1;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=WP_002227959.1;transl_table=11 NC_008149.1 RefSeq gene 2562384 2562893 . - . ID=gene2403;Name=YPN_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12025;old_locus_tag=YPN_2279 NC_008149.1 Protein Homology CDS 2562384 2562893 . - 0 ID=cds2336;Parent=gene2403;Dbxref=Genbank:WP_002211154.1;Name=WP_002211154.1;gbkey=CDS;product=flagellar biosynthesis protein FliZ;protein_id=WP_002211154.1;transl_table=11 NC_008149.1 RefSeq gene 2563115 2563837 . - . ID=gene2404;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=YPN_RS12030;old_locus_tag=YPN_2280 NC_008149.1 Protein Homology CDS 2563115 2563837 . - 0 ID=cds2337;Parent=gene2404;Dbxref=Genbank:WP_002211153.1;Name=WP_002211153.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=WP_002211153.1;transl_table=11 NC_008149.1 RefSeq gene 2564184 2565293 . - . ID=gene2405;Name=YPN_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12035;old_locus_tag=YPN_2281 NC_008149.1 Protein Homology CDS 2564184 2565293 . - 0 ID=cds2338;Parent=gene2405;Dbxref=Genbank:WP_002211152.1;Name=WP_002211152.1;Note=structural flagella protein;gbkey=CDS;product=flagellin;protein_id=WP_002211152.1;transl_table=11 NC_008149.1 RefSeq gene 2565590 2566990 . + . ID=gene2406;Name=YPN_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12040;old_locus_tag=YPN_2282 NC_008149.1 Protein Homology CDS 2565590 2566990 . + 0 ID=cds2339;Parent=gene2406;Dbxref=Genbank:WP_002211150.1;Name=WP_002211150.1;gbkey=CDS;product=flagellar cap protein FliD;protein_id=WP_002211150.1;transl_table=11 NC_008149.1 RefSeq gene 2567001 2567399 . + . ID=gene2407;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YPN_RS12045;old_locus_tag=YPN_2283 NC_008149.1 Protein Homology CDS 2567001 2567399 . + 0 ID=cds2340;Parent=gene2407;Dbxref=Genbank:WP_002211149.1;Name=WP_002211149.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar export chaperone FliS;protein_id=WP_002211149.1;transl_table=11 NC_008149.1 RefSeq gene 2567410 2567772 . + . ID=gene2408;Name=YPN_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12050;old_locus_tag=YPN_2284 NC_008149.1 Protein Homology CDS 2567410 2567772 . + 0 ID=cds2341;Parent=gene2408;Dbxref=Genbank:WP_002211148.1;Name=WP_002211148.1;gbkey=CDS;product=flagellar protein FliT;protein_id=WP_002211148.1;transl_table=11 NC_008149.1 RefSeq gene 2567827 2568066 . + . ID=gene2409;Name=YPN_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12055 NC_008149.1 Protein Homology CDS 2567827 2568066 . + 0 ID=cds2342;Parent=gene2409;Dbxref=Genbank:WP_002215994.1;Name=WP_002215994.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215994.1;transl_table=11 NC_008149.1 RefSeq gene 2568073 2568948 . + . ID=gene2410;Name=YPN_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12060;old_locus_tag=YPN_2285 NC_008149.1 Protein Homology CDS 2568073 2568948 . + 0 ID=cds2343;Parent=gene2410;Dbxref=Genbank:WP_002211147.1;Name=WP_002211147.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211147.1;transl_table=11 NC_008149.1 RefSeq gene 2569302 2571215 . + . ID=gene2411;Name=YPN_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12065;old_locus_tag=YPN_2287 NC_008149.1 Protein Homology CDS 2569302 2571215 . + 0 ID=cds2344;Parent=gene2411;Dbxref=Genbank:WP_002228541.1;Name=WP_002228541.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002228541.1;transl_table=11 NC_008149.1 RefSeq gene 2571352 2572257 . + . ID=gene2412;Name=YPN_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12070;old_locus_tag=YPN_2288 NC_008149.1 Protein Homology CDS 2571352 2572257 . + 0 ID=cds2345;Parent=gene2412;Dbxref=Genbank:WP_002228542.1;Name=WP_002228542.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002228542.1;transl_table=11 NC_008149.1 RefSeq gene 2572418 2573029 . + . ID=gene2413;Name=YPN_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12075;old_locus_tag=YPN_2289 NC_008149.1 Protein Homology CDS 2572418 2573029 . + 0 ID=cds2346;Parent=gene2413;Dbxref=Genbank:WP_002211145.1;Name=WP_002211145.1;gbkey=CDS;product=DNA-3-methyladenine glycosidase;protein_id=WP_002211145.1;transl_table=11 NC_008149.1 RefSeq gene 2573215 2573691 . - . ID=gene2414;Name=YPN_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12080;old_locus_tag=YPN_2290 NC_008149.1 Protein Homology CDS 2573215 2573691 . - 0 ID=cds2347;Parent=gene2414;Dbxref=Genbank:WP_002215992.1;Name=WP_002215992.1;gbkey=CDS;product=death-on-curing family protein;protein_id=WP_002215992.1;transl_table=11 NC_008149.1 RefSeq gene 2573702 2573881 . - . ID=gene2415;Name=YPN_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12085;old_locus_tag=YPN_2291 NC_008149.1 Protein Homology CDS 2573702 2573881 . - 0 ID=cds2348;Parent=gene2415;Dbxref=Genbank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11 NC_008149.1 RefSeq gene 2574301 2574612 . - . ID=gene2416;Name=YPN_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12090;old_locus_tag=YPN_2292 NC_008149.1 Protein Homology CDS 2574301 2574612 . - 0 ID=cds2349;Parent=gene2416;Dbxref=Genbank:WP_002211144.1;Name=WP_002211144.1;gbkey=CDS;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211144.1;transl_table=11 NC_008149.1 RefSeq gene 2574965 2576677 . + . ID=gene2417;Name=YPN_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12095;old_locus_tag=YPN_2293 NC_008149.1 Protein Homology CDS 2574965 2576677 . + 0 ID=cds2350;Parent=gene2417;Dbxref=Genbank:WP_002211143.1;Name=WP_002211143.1;gbkey=CDS;product=flagellar M-ring protein FliF;protein_id=WP_002211143.1;transl_table=11 NC_008149.1 RefSeq gene 2576674 2577666 . + . ID=gene2418;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPN_RS12100;old_locus_tag=YPN_2294 NC_008149.1 Protein Homology CDS 2576674 2577666 . + 0 ID=cds2351;Parent=gene2418;Dbxref=Genbank:WP_002211142.1;Name=WP_002211142.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11 NC_008149.1 RefSeq gene 2577659 2578375 . + . ID=gene2419;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPN_RS12105;old_locus_tag=YPN_2295 NC_008149.1 Protein Homology CDS 2577659 2578375 . + 0 ID=cds2352;Parent=gene2419;Dbxref=Genbank:WP_002228543.1;Name=WP_002228543.1;Note=binds to and inhibits the function of flagella specific ATPase FliI;gbkey=CDS;gene=fliH;product=flagellar assembly protein H;protein_id=WP_002228543.1;transl_table=11 NC_008149.1 RefSeq gene 2578338 2579792 . + . ID=gene2420;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPN_RS12110;old_locus_tag=YPN_2296 NC_008149.1 Protein Homology CDS 2578338 2579792 . + 0 ID=cds2353;Parent=gene2420;Dbxref=Genbank:WP_002211140.1;Name=WP_002211140.1;Note=involved in type III protein export during flagellum assembly;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=WP_002211140.1;transl_table=11 NC_008149.1 RefSeq gene 2579892 2580338 . + . ID=gene2421;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=YPN_RS12115;old_locus_tag=YPN_2297 NC_008149.1 Protein Homology CDS 2579892 2580338 . + 0 ID=cds2354;Parent=gene2421;Dbxref=Genbank:WP_002211139.1;Name=WP_002211139.1;Note=rod/hook and filament chaperone;gbkey=CDS;gene=fliJ;product=flagellar biosynthesis chaperone;protein_id=WP_002211139.1;transl_table=11 NC_008149.1 RefSeq gene 2580335 2581687 . + . ID=gene2422;Name=YPN_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12120;old_locus_tag=YPN_2298 NC_008149.1 Protein Homology CDS 2580335 2581687 . + 0 ID=cds2355;Parent=gene2422;Dbxref=Genbank:WP_002211138.1;Name=WP_002211138.1;gbkey=CDS;product=flagellar hook-length control protein FliK;protein_id=WP_002211138.1;transl_table=11 NC_008149.1 RefSeq gene 2581954 2582424 . + . ID=gene2423;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=YPN_RS12125;old_locus_tag=YPN_2299 NC_008149.1 Protein Homology CDS 2581954 2582424 . + 0 ID=cds2356;Parent=gene2423;Dbxref=Genbank:WP_002227961.1;Name=WP_002227961.1;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;gbkey=CDS;gene=fliL;product=flagellar basal body protein FliL;protein_id=WP_002227961.1;transl_table=11 NC_008149.1 RefSeq gene 2582430 2583431 . + . ID=gene2424;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=YPN_RS12130;old_locus_tag=YPN_2300 NC_008149.1 Protein Homology CDS 2582430 2583431 . + 0 ID=cds2357;Parent=gene2424;Dbxref=Genbank:WP_002211135.1;Name=WP_002211135.1;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=WP_002211135.1;transl_table=11 NC_008149.1 RefSeq gene 2583428 2583844 . + . ID=gene2425;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=YPN_RS12135;old_locus_tag=YPN_2301 NC_008149.1 Protein Homology CDS 2583428 2583844 . + 0 ID=cds2358;Parent=gene2425;Dbxref=Genbank:WP_002211134.1;Name=WP_002211134.1;Note=One of three proteins involved in switching the direction of the flagellar rotation;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=WP_002211134.1;transl_table=11 NC_008149.1 RefSeq gene 2583844 2584380 . + . ID=gene2426;Name=YPN_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12140;old_locus_tag=YPN_2302 NC_008149.1 Protein Homology CDS 2583844 2584380 . + 0 ID=cds2359;Parent=gene2426;Dbxref=Genbank:WP_002211133.1;Name=WP_002211133.1;gbkey=CDS;product=flagellar biosynthesis protein;protein_id=WP_002211133.1;transl_table=11 NC_008149.1 RefSeq gene 2584461 2585201 . + . ID=gene2427;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=YPN_RS12145;old_locus_tag=YPN_2303 NC_008149.1 Protein Homology CDS 2584461 2585201 . + 0 ID=cds2360;Parent=gene2427;Dbxref=Genbank:WP_002220494.1;Name=WP_002220494.1;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliP;product=flagellar biosynthesis protein FliP;protein_id=WP_002220494.1;transl_table=11 NC_008149.1 RefSeq gene 2585307 2585576 . + . ID=gene2428;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=YPN_RS12150;old_locus_tag=YPN_2304 NC_008149.1 Protein Homology CDS 2585307 2585576 . + 0 ID=cds2361;Parent=gene2428;Dbxref=Genbank:WP_002211131.1;Name=WP_002211131.1;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliQ;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211131.1;transl_table=11 NC_008149.1 RefSeq gene 2585579 2586361 . + . ID=gene2429;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=YPN_RS12155;old_locus_tag=YPN_2305 NC_008149.1 Protein Homology CDS 2585579 2586361 . + 0 ID=cds2362;Parent=gene2429;Dbxref=Genbank:WP_002211130.1;Name=WP_002211130.1;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;gbkey=CDS;gene=fliR;product=flagellar biosynthesis protein FliR;protein_id=WP_002211130.1;transl_table=11 NC_008149.1 RefSeq gene 2586568 2586750 . + . ID=gene2430;Name=YPN_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12160 NC_008149.1 Protein Homology CDS 2586568 2586750 . + 0 ID=cds2363;Parent=gene2430;Dbxref=Genbank:WP_002214976.1;Name=WP_002214976.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214976.1;transl_table=11 NC_008149.1 RefSeq gene 2586795 2587214 . + . ID=gene2431;Name=YPN_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12165;old_locus_tag=YPN_2307 NC_008149.1 Protein Homology CDS 2586795 2587214 . + 0 ID=cds2364;Parent=gene2431;Dbxref=Genbank:WP_002211129.1;Name=WP_002211129.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211129.1;transl_table=11 NC_008149.1 RefSeq gene 2587472 2588431 . - . ID=gene2432;Name=YPN_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12170;old_locus_tag=YPN_2308 NC_008149.1 Protein Homology CDS 2587472 2588431 . - 0 ID=cds2365;Parent=gene2432;Dbxref=Genbank:WP_002223882.1;Name=WP_002223882.1;gbkey=CDS;product=kinase pfkB family;protein_id=WP_002223882.1;transl_table=11 NC_008149.1 RefSeq gene 2588480 2589502 . - . ID=gene2433;Name=YPN_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12175;old_locus_tag=YPN_2309 NC_008149.1 Protein Homology CDS 2588480 2589502 . - 0 ID=cds2366;Parent=gene2433;Dbxref=Genbank:WP_002214974.1;Name=WP_002214974.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002214974.1;transl_table=11 NC_008149.1 RefSeq gene 2589505 2591082 . - . ID=gene2434;Name=YPN_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12180;old_locus_tag=YPN_2310 NC_008149.1 Protein Homology CDS 2589505 2591082 . - 0 ID=cds2367;Parent=gene2434;Dbxref=Genbank:WP_002211126.1;Name=WP_002211126.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002211126.1;transl_table=11 NC_008149.1 RefSeq gene 2591148 2592143 . - . ID=gene2435;Name=YPN_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12185;old_locus_tag=YPN_2311 NC_008149.1 Protein Homology CDS 2591148 2592143 . - 0 ID=cds2368;Parent=gene2435;Dbxref=Genbank:WP_002211125.1;Name=WP_002211125.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211125.1;transl_table=11 NC_008149.1 RefSeq gene 2592186 2593265 . - . ID=gene2436;Name=YPN_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12190;old_locus_tag=YPN_2312 NC_008149.1 Protein Homology CDS 2592186 2593265 . - 0 ID=cds2369;Parent=gene2436;Dbxref=Genbank:WP_002211124.1;Name=WP_002211124.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211124.1;transl_table=11 NC_008149.1 RefSeq gene 2593395 2595461 . - . ID=gene2437;Name=YPN_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12195;old_locus_tag=YPN_2313 NC_008149.1 Protein Homology CDS 2593395 2595461 . - 0 ID=cds2370;Parent=gene2437;Dbxref=Genbank:WP_002211122.1;Name=WP_002211122.1;gbkey=CDS;product=short-chain dehydrogenase;protein_id=WP_002211122.1;transl_table=11 NC_008149.1 RefSeq gene 2595679 2596680 . + . ID=gene2438;Name=YPN_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12200;old_locus_tag=YPN_2314 NC_008149.1 Protein Homology CDS 2595679 2596680 . + 0 ID=cds2371;Parent=gene2438;Dbxref=Genbank:WP_002211121.1;Name=WP_002211121.1;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=WP_002211121.1;transl_table=11 NC_008149.1 RefSeq gene 2596709 2597689 . - . ID=gene2439;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPN_RS12205;old_locus_tag=YPN_2315 NC_008149.1 Protein Homology CDS 2596709 2597689 . - 0 ID=cds2372;Parent=gene2439;Dbxref=Genbank:WP_002211120.1;Name=WP_002211120.1;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11 NC_008149.1 RefSeq gene 2597828 2599492 . - . ID=gene2440;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPN_RS12210;old_locus_tag=YPN_2316 NC_008149.1 Protein Homology CDS 2597828 2599492 . - 0 ID=cds2373;Parent=gene2440;Dbxref=Genbank:WP_002211119.1;Name=WP_002211119.1;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;gbkey=CDS;gene=flgK;product=flagellar hook protein FlgK;protein_id=WP_002211119.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2599660 2600354 . + . ID=id215;gbkey=repeat_region NC_008149.1 RefSeq gene 2600363 2601307 . - . ID=gene2441;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPN_RS12215;old_locus_tag=YPN_2317 NC_008149.1 Protein Homology CDS 2600363 2601307 . - 0 ID=cds2374;Parent=gene2441;Dbxref=Genbank:WP_002211118.1;Name=WP_002211118.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein FlgJ;protein_id=WP_002211118.1;transl_table=11 NC_008149.1 RefSeq gene 2601307 2602416 . - . ID=gene2442;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=YPN_RS12220;old_locus_tag=YPN_2318 NC_008149.1 Protein Homology CDS 2601307 2602416 . - 0 ID=cds2375;Parent=gene2442;Dbxref=Genbank:WP_002228547.1;Name=WP_002228547.1;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;gbkey=CDS;gene=flgI;product=flagellar basal body P-ring protein;protein_id=WP_002228547.1;transl_table=11 NC_008149.1 RefSeq gene 2602431 2603162 . - . ID=gene2443;Name=YPN_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12225;old_locus_tag=YPN_2319 NC_008149.1 Protein Homology CDS 2602431 2603162 . - 0 ID=cds2376;Parent=gene2443;Dbxref=Genbank:WP_002220498.1;Name=WP_002220498.1;gbkey=CDS;product=flagellar basal body L-ring protein;protein_id=WP_002220498.1;transl_table=11 NC_008149.1 RefSeq gene 2603264 2603989 . - . ID=gene2444;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=YPN_RS12230;old_locus_tag=YPN_2320;pseudo=true NC_008149.1 Protein Homology CDS 2603264 2603989 . - 0 ID=cds2377;Parent=gene2444;Note=makes up the distal portion of the flagellar basal body rod;gbkey=CDS;gene=flgG;product=flagellar biosynthesis protein FlgG;pseudo=true;transl_except=(pos:complement(2603975..2603977)%2Caa:Other);transl_table=11 NC_008149.1 RefSeq gene 2603943 2604572 . - . ID=gene2445;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=YPN_RS12235;old_locus_tag=YPN_2321 NC_008149.1 Protein Homology CDS 2603943 2604572 . - 0 ID=cds2378;Parent=gene2445;Dbxref=Genbank:WP_002211114.1;Name=WP_002211114.1;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgF;product=flagellar basal body rod protein FlgF;protein_id=WP_002211114.1;transl_table=11 NC_008149.1 RefSeq gene 2604594 2605880 . - . ID=gene2446;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPN_RS12240;old_locus_tag=YPN_2322 NC_008149.1 Protein Homology CDS 2604594 2605880 . - 0 ID=cds2379;Parent=gene2446;Dbxref=Genbank:WP_002211113.1;Name=WP_002211113.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11 NC_008149.1 RefSeq gene 2606082 2606759 . - . ID=gene2447;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPN_RS12245;old_locus_tag=YPN_2323 NC_008149.1 Protein Homology CDS 2606082 2606759 . - 0 ID=cds2380;Parent=gene2447;Dbxref=Genbank:WP_002211112.1;Name=WP_002211112.1;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=WP_002211112.1;transl_table=11 NC_008149.1 RefSeq gene 2606774 2607178 . - . ID=gene2448;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=YPN_RS12250;old_locus_tag=YPN_2324 NC_008149.1 Protein Homology CDS 2606774 2607178 . - 0 ID=cds2381;Parent=gene2448;Dbxref=Genbank:WP_002211111.1;Name=WP_002211111.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=WP_002211111.1;transl_table=11 NC_008149.1 RefSeq gene 2607184 2607597 . - . ID=gene2449;Name=YPN_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12255;old_locus_tag=YPN_2325 NC_008149.1 Protein Homology CDS 2607184 2607597 . - 0 ID=cds2382;Parent=gene2449;Dbxref=Genbank:WP_002211110.1;Name=WP_002211110.1;gbkey=CDS;product=flagellar biosynthesis protein FlgB;protein_id=WP_002211110.1;transl_table=11 NC_008149.1 RefSeq gene 2607836 2608534 . + . ID=gene2450;Name=YPN_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12260;old_locus_tag=YPN_2326 NC_008149.1 Protein Homology CDS 2607836 2608534 . + 0 ID=cds2383;Parent=gene2450;Dbxref=Genbank:WP_002227966.1;Name=WP_002227966.1;gbkey=CDS;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=WP_002227966.1;transl_table=11 NC_008149.1 RefSeq gene 2608685 2608987 . + . ID=gene2451;Name=YPN_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12265;old_locus_tag=YPN_2327 NC_008149.1 Protein Homology CDS 2608685 2608987 . + 0 ID=cds2384;Parent=gene2451;Dbxref=Genbank:WP_002211108.1;Name=WP_002211108.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;product=flagellar biosynthesis protein FlgM;protein_id=WP_002211108.1;transl_table=11 NC_008149.1 RefSeq gene 2609006 2609446 . + . ID=gene2452;Name=YPN_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12270;old_locus_tag=YPN_2328 NC_008149.1 Protein Homology CDS 2609006 2609446 . + 0 ID=cds2385;Parent=gene2452;Dbxref=Genbank:WP_002211107.1;Name=WP_002211107.1;Note=export chaperone for FlgK and FlgL;gbkey=CDS;product=flagellar synthesis protein FlgN;protein_id=WP_002211107.1;transl_table=11 NC_008149.1 RefSeq gene 2609636 2611708 . - . ID=gene2453;Name=YPN_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12275;old_locus_tag=YPN_2329 NC_008149.1 Protein Homology CDS 2609636 2611708 . - 0 ID=cds2386;Parent=gene2453;Dbxref=Genbank:WP_002211106.1;Name=WP_002211106.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211106.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2611685 2612406 . + . ID=id216;gbkey=repeat_region NC_008149.1 RefSeq gene 2611798 2612256 . - . ID=gene2454;Name=YPN_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12280;old_locus_tag=YPN_2330 NC_008149.1 Protein Homology CDS 2611798 2612256 . - 0 ID=cds2387;Parent=gene2454;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 2612246 2613250 . - . ID=gene2455;Name=YPN_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12285;old_locus_tag=YPN_2331 NC_008149.1 Protein Homology CDS 2612246 2613250 . - 0 ID=cds2388;Parent=gene2455;Dbxref=Genbank:WP_011566188.1;Name=WP_011566188.1;gbkey=CDS;product=invasin;protein_id=WP_011566188.1;transl_table=11 NC_008149.1 RefSeq gene 2613914 2614336 . - . ID=gene2456;Name=YPN_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12290;old_locus_tag=YPN_2332 NC_008149.1 Protein Homology CDS 2613914 2614336 . - 0 ID=cds2389;Parent=gene2456;Dbxref=Genbank:WP_002211101.1;Name=WP_002211101.1;gbkey=CDS;product=flagellar biosynthesis protein FlhE;protein_id=WP_002211101.1;transl_table=11 NC_008149.1 RefSeq gene 2614336 2616414 . - . ID=gene2457;Name=YPN_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12295;old_locus_tag=YPN_2333 NC_008149.1 Protein Homology CDS 2614336 2616414 . - 0 ID=cds2390;Parent=gene2457;Dbxref=Genbank:WP_002211100.1;Name=WP_002211100.1;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=WP_002211100.1;transl_table=11 NC_008149.1 RefSeq gene 2616414 2617574 . - . ID=gene2458;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=YPN_RS12300;old_locus_tag=YPN_2334 NC_008149.1 Protein Homology CDS 2616414 2617574 . - 0 ID=cds2391;Parent=gene2458;Dbxref=Genbank:WP_002211099.1;Name=WP_002211099.1;Note=membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export;gbkey=CDS;gene=flhB;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211099.1;transl_table=11 NC_008149.1 RefSeq gene 2618106 2618564 . + . ID=gene2459;Name=YPN_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12305;old_locus_tag=YPN_2335 NC_008149.1 Protein Homology CDS 2618106 2618564 . + 0 ID=cds2392;Parent=gene2459;Dbxref=Genbank:WP_002211098.1;Name=WP_002211098.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211098.1;transl_table=11 NC_008149.1 RefSeq gene 2618558 2618884 . + . ID=gene2460;Name=YPN_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12310;old_locus_tag=YPN_2336 NC_008149.1 Protein Homology CDS 2618558 2618884 . + 0 ID=cds2393;Parent=gene2460;Dbxref=Genbank:WP_002211097.1;Name=WP_002211097.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002211097.1;transl_table=11 NC_008149.1 RefSeq gene 2618897 2619127 . - . ID=gene2461;Name=YPN_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12315 NC_008149.1 Protein Homology CDS 2618897 2619127 . - 0 ID=cds2394;Parent=gene2461;Dbxref=Genbank:WP_002218131.1;Name=WP_002218131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218131.1;transl_table=11 NC_008149.1 RefSeq gene 2619407 2619748 . - . ID=gene2462;Name=YPN_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12320;old_locus_tag=YPN_2337 NC_008149.1 Protein Homology CDS 2619407 2619748 . - 0 ID=cds2395;Parent=gene2462;Dbxref=Genbank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211095.1;transl_table=11 NC_008149.1 RefSeq gene 2619845 2620729 . - . ID=gene2463;Name=YPN_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12325;old_locus_tag=YPN_2338 NC_008149.1 Protein Homology CDS 2619845 2620729 . - 0 ID=cds2396;Parent=gene2463;Dbxref=Genbank:WP_002211094.1;Name=WP_002211094.1;gbkey=CDS;product=copper resistance protein D;protein_id=WP_002211094.1;transl_table=11 NC_008149.1 RefSeq gene 2620732 2621118 . - . ID=gene2464;Name=YPN_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12330;old_locus_tag=YPN_2339 NC_008149.1 Protein Homology CDS 2620732 2621118 . - 0 ID=cds2397;Parent=gene2464;Dbxref=Genbank:WP_002211093.1;Name=WP_002211093.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211093.1;transl_table=11 NC_008149.1 RefSeq gene 2621524 2622033 . - . ID=gene2465;Name=YPN_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12335;old_locus_tag=YPN_2340 NC_008149.1 Protein Homology CDS 2621524 2622033 . - 0 ID=cds2398;Parent=gene2465;Dbxref=Genbank:WP_002211092.1;Name=WP_002211092.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=ferritin;protein_id=WP_002211092.1;transl_table=11 NC_008149.1 RefSeq gene 2622434 2622664 . + . ID=gene2466;Name=YPN_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12340;old_locus_tag=YPN_2341 NC_008149.1 Protein Homology CDS 2622434 2622664 . + 0 ID=cds2399;Parent=gene2466;Dbxref=Genbank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11 NC_008149.1 RefSeq gene 2622724 2623674 . - . ID=gene2467;Name=YPN_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12345;old_locus_tag=YPN_2342 NC_008149.1 Protein Homology CDS 2622724 2623674 . - 0 ID=cds2400;Parent=gene2467;Dbxref=Genbank:WP_002211090.1;Name=WP_002211090.1;gbkey=CDS;product=proline iminopeptidase;protein_id=WP_002211090.1;transl_table=11 NC_008149.1 RefSeq gene 2624396 2626447 . - . ID=gene2468;Name=YPN_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12350;old_locus_tag=YPN_2343 NC_008149.1 Protein Homology CDS 2624396 2626447 . - 0 ID=cds2401;Parent=gene2468;Dbxref=Genbank:WP_002211088.1;Name=WP_002211088.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;product=oligopeptidase B;protein_id=WP_002211088.1;transl_table=11 NC_008149.1 RefSeq gene 2626757 2627182 . - . ID=gene2469;Name=YPN_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12355;old_locus_tag=YPN_2344 NC_008149.1 Protein Homology CDS 2626757 2627182 . - 0 ID=cds2402;Parent=gene2469;Dbxref=Genbank:WP_002211087.1;Name=WP_002211087.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211087.1;transl_table=11 NC_008149.1 RefSeq gene 2627274 2627582 . - . ID=gene2470;Name=YPN_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12360;old_locus_tag=YPN_2345 NC_008149.1 Protein Homology CDS 2627274 2627582 . - 0 ID=cds2403;Parent=gene2470;Dbxref=Genbank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211086.1;transl_table=11 NC_008149.1 RefSeq gene 2627622 2627942 . - . ID=gene2471;Name=YPN_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12365;old_locus_tag=YPN_2346 NC_008149.1 Protein Homology CDS 2627622 2627942 . - 0 ID=cds2404;Parent=gene2471;Dbxref=Genbank:WP_002211085.1;Name=WP_002211085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211085.1;transl_table=11 NC_008149.1 RefSeq gene 2628036 2629418 . - . ID=gene2472;Name=YPN_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12370;old_locus_tag=YPN_2347 NC_008149.1 Protein Homology CDS 2628036 2629418 . - 0 ID=cds2405;Parent=gene2472;Dbxref=Genbank:WP_002211084.1;Name=WP_002211084.1;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;gbkey=CDS;product=RNA helicase;protein_id=WP_002211084.1;transl_table=11 NC_008149.1 RefSeq gene 2629731 2630912 . + . ID=gene2473;Name=YPN_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12375;old_locus_tag=YPN_2348 NC_008149.1 Protein Homology CDS 2629731 2630912 . + 0 ID=cds2406;Parent=gene2473;Dbxref=Genbank:WP_002211083.1;Name=WP_002211083.1;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_002211083.1;transl_table=11 NC_008149.1 RefSeq gene 2631038 2631295 . - . ID=gene2474;Name=YPN_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12380;old_locus_tag=YPN_2349 NC_008149.1 Protein Homology CDS 2631038 2631295 . - 0 ID=cds2407;Parent=gene2474;Dbxref=Genbank:WP_002211082.1;Name=WP_002211082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211082.1;transl_table=11 NC_008149.1 RefSeq gene 2631460 2632836 . + . ID=gene2475;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=YPN_RS12385;old_locus_tag=YPN_2350 NC_008149.1 Protein Homology CDS 2631460 2632836 . + 0 ID=cds2408;Parent=gene2475;Dbxref=Genbank:WP_002211081.1;Name=WP_002211081.1;Note=para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine;gbkey=CDS;gene=pabB;product=aminodeoxychorismate synthase component I;protein_id=WP_002211081.1;transl_table=11 NC_008149.1 RefSeq gene 2632833 2633432 . + . ID=gene2476;Name=YPN_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12390;old_locus_tag=YPN_2351 NC_008149.1 Protein Homology CDS 2632833 2633432 . + 0 ID=cds2409;Parent=gene2476;Dbxref=Genbank:WP_002211080.1;Name=WP_002211080.1;gbkey=CDS;product=NUDIX hydrolase;protein_id=WP_002211080.1;transl_table=11 NC_008149.1 RefSeq gene 2634140 2635504 . + . ID=gene2477;Name=YPN_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12395;old_locus_tag=YPN_2352 NC_008149.1 Protein Homology CDS 2634140 2635504 . + 0 ID=cds2410;Parent=gene2477;Dbxref=Genbank:WP_002211079.1;Name=WP_002211079.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;product=L-serine dehydratase;protein_id=WP_002211079.1;transl_table=11 NC_008149.1 RefSeq gene 2635784 2636281 . - . ID=gene2478;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=YPN_RS12400;old_locus_tag=YPN_2353 NC_008149.1 Protein Homology CDS 2635784 2636281 . - 0 ID=cds2411;Parent=gene2478;Dbxref=Genbank:WP_002211078.1;Name=WP_002211078.1;Note=catalyzes the reduction of MN%2C FAD and riboflavin by NADH;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211078.1;transl_table=11 NC_008149.1 RefSeq gene 2636302 2637864 . - . ID=gene2479;Name=YPN_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12405;old_locus_tag=YPN_2354 NC_008149.1 Protein Homology CDS 2636302 2637864 . - 0 ID=cds2412;Parent=gene2479;Dbxref=Genbank:WP_002211077.1;Name=WP_002211077.1;gbkey=CDS;product=4-hydroxyphenylacetate 3-monooxygenase;protein_id=WP_002211077.1;transl_table=11 NC_008149.1 RefSeq gene 2637932 2639299 . - . ID=gene2480;Name=YPN_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12410;old_locus_tag=YPN_2355 NC_008149.1 Protein Homology CDS 2637932 2639299 . - 0 ID=cds2413;Parent=gene2480;Dbxref=Genbank:WP_002211076.1;Name=WP_002211076.1;gbkey=CDS;product=4-hydroxyphenylacetate permease;protein_id=WP_002211076.1;transl_table=11 NC_008149.1 RefSeq gene 2639325 2640131 . - . ID=gene2481;Name=YPN_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12415;old_locus_tag=YPN_2356 NC_008149.1 Protein Homology CDS 2639325 2640131 . - 0 ID=cds2414;Parent=gene2481;Dbxref=Genbank:WP_002211075.1;Name=WP_002211075.1;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=WP_002211075.1;transl_table=11 NC_008149.1 RefSeq gene 2640142 2640945 . - . ID=gene2482;Name=YPN_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12420;old_locus_tag=YPN_2357 NC_008149.1 Protein Homology CDS 2640142 2640945 . - 0 ID=cds2415;Parent=gene2482;Dbxref=Genbank:WP_002211074.1;Name=WP_002211074.1;gbkey=CDS;product=2-oxo-hept-3-ene-1%2C7-dioate hydratase;protein_id=WP_002211074.1;transl_table=11 NC_008149.1 RefSeq gene 2640939 2641337 . - . ID=gene2483;Name=YPN_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12425;old_locus_tag=YPN_2358 NC_008149.1 Protein Homology CDS 2640939 2641337 . - 0 ID=cds2416;Parent=gene2483;Dbxref=Genbank:WP_002211073.1;Name=WP_002211073.1;Note=catalyzes the formation of 5-oxo-pent-3-ene-1%2C2%2C5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid;gbkey=CDS;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=WP_002211073.1;transl_table=11 NC_008149.1 RefSeq gene 2641362 2642219 . - . ID=gene2484;Name=YPN_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12430;old_locus_tag=YPN_2359 NC_008149.1 Protein Homology CDS 2641362 2642219 . - 0 ID=cds2417;Parent=gene2484;Dbxref=Genbank:WP_002211072.1;Name=WP_002211072.1;gbkey=CDS;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_002211072.1;transl_table=11 NC_008149.1 RefSeq gene 2642338 2643735 . - . ID=gene2485;Name=YPN_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12435;old_locus_tag=YPN_2360 NC_008149.1 Protein Homology CDS 2642338 2643735 . - 0 ID=cds2418;Parent=gene2485;Dbxref=Genbank:WP_002211071.1;Name=WP_002211071.1;Note=catalyzes the formation of betaine from betaine aldehyde;gbkey=CDS;product=betaine-aldehyde dehydrogenase;protein_id=WP_002211071.1;transl_table=11 NC_008149.1 RefSeq gene 2643732 2644502 . - . ID=gene2486;Name=YPN_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12440;old_locus_tag=YPN_2361 NC_008149.1 Protein Homology CDS 2643732 2644502 . - 0 ID=cds2419;Parent=gene2486;Dbxref=Genbank:WP_002228551.1;Name=WP_002228551.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002228551.1;transl_table=11 NC_008149.1 RefSeq gene 2644499 2645131 . - . ID=gene2487;Name=YPN_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12445;old_locus_tag=YPN_2362 NC_008149.1 Protein Homology CDS 2644499 2645131 . - 0 ID=cds2420;Parent=gene2487;Dbxref=Genbank:WP_002214880.1;Name=WP_002214880.1;gbkey=CDS;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=WP_002214880.1;transl_table=11 NC_008149.1 RefSeq gene 2645515 2645982 . + . ID=gene2488;Name=YPN_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12450;old_locus_tag=YPN_2363 NC_008149.1 Protein Homology CDS 2645515 2645982 . + 0 ID=cds2421;Parent=gene2488;Dbxref=Genbank:WP_002211070.1;Name=WP_002211070.1;gbkey=CDS;product=homoprotocatechuate degradative operon repressor;protein_id=WP_002211070.1;transl_table=11 NC_008149.1 RefSeq gene 2646084 2647460 . - . ID=gene2489;Name=YPN_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12455;old_locus_tag=YPN_2364 NC_008149.1 Protein Homology CDS 2646084 2647460 . - 0 ID=cds2422;Parent=gene2489;Dbxref=Genbank:WP_002358805.1;Name=WP_002358805.1;gbkey=CDS;product=membrane protein;protein_id=WP_002358805.1;transl_table=11 NC_008149.1 RefSeq gene 2648248 2649222 . + . ID=gene2490;Name=YPN_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12460;old_locus_tag=YPN_2365 NC_008149.1 Protein Homology CDS 2648248 2649222 . + 0 ID=cds2423;Parent=gene2490;Dbxref=Genbank:WP_002211069.1;Name=WP_002211069.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose transporter subunit IIAB;protein_id=WP_002211069.1;transl_table=11 NC_008149.1 RefSeq gene 2649314 2650111 . + . ID=gene2491;Name=YPN_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12465;old_locus_tag=YPN_2366 NC_008149.1 Protein Homology CDS 2649314 2650111 . + 0 ID=cds2424;Parent=gene2491;Dbxref=Genbank:WP_002211068.1;Name=WP_002211068.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_002211068.1;transl_table=11 NC_008149.1 RefSeq gene 2650127 2651005 . + . ID=gene2492;Name=YPN_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12470;old_locus_tag=YPN_2367 NC_008149.1 Protein Homology CDS 2650127 2651005 . + 0 ID=cds2425;Parent=gene2492;Dbxref=Genbank:WP_002211067.1;Name=WP_002211067.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11 NC_008149.1 RefSeq gene 2651205 2651666 . + . ID=gene2493;Name=YPN_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12475;old_locus_tag=YPN_2368 NC_008149.1 Protein Homology CDS 2651205 2651666 . + 0 ID=cds2426;Parent=gene2493;Dbxref=Genbank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211066.1;transl_table=11 NC_008149.1 RefSeq gene 2652095 2652664 . + . ID=gene2494;Name=YPN_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12480;old_locus_tag=YPN_2369 NC_008149.1 Protein Homology CDS 2652095 2652664 . + 0 ID=cds2427;Parent=gene2494;Dbxref=Genbank:WP_002211065.1;Name=WP_002211065.1;Note=membrane protein YebN;gbkey=CDS;product=membrane protein;protein_id=WP_002211065.1;transl_table=11 NC_008149.1 RefSeq gene 2652825 2655038 . - . ID=gene2495;Name=YPN_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12485;old_locus_tag=YPN_2370 NC_008149.1 Protein Homology CDS 2652825 2655038 . - 0 ID=cds2428;Parent=gene2495;Dbxref=Genbank:WP_002211064.1;Name=WP_002211064.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211064.1;transl_table=11 NC_008149.1 RefSeq gene 2655460 2657542 . + . ID=gene2496;Name=YPN_RS12490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS12490;old_locus_tag=YPN_2372;pseudo=true NC_008149.1 Protein Homology CDS 2655460 2657542 . + 0 ID=cds2429;Parent=gene2496;exception=annotated by transcript or proteomic data;gbkey=CDS;product=diguanylate cyclase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2657764 2658042 . + . ID=gene2497;Name=YPN_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12495;old_locus_tag=YPN_2373 NC_008149.1 Protein Homology CDS 2657764 2658042 . + 0 ID=cds2430;Parent=gene2497;Dbxref=Genbank:WP_002211062.1;Name=WP_002211062.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211062.1;transl_table=11 NC_008149.1 RefSeq gene 2658264 2659103 . - . ID=gene2498;Name=YPN_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12500;old_locus_tag=YPN_2374 NC_008149.1 Protein Homology CDS 2658264 2659103 . - 0 ID=cds2431;Parent=gene2498;Dbxref=Genbank:WP_002211061.1;Name=WP_002211061.1;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_002211061.1;transl_table=11 NC_008149.1 RefSeq gene 2659498 2660253 . + . ID=gene2499;Name=YPN_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12505;old_locus_tag=YPN_2375 NC_008149.1 Protein Homology CDS 2659498 2660253 . + 0 ID=cds2432;Parent=gene2499;Dbxref=Genbank:WP_002211060.1;Name=WP_002211060.1;gbkey=CDS;product=polyphenol oxidoreductase;protein_id=WP_002211060.1;transl_table=11 NC_008149.1 cmsearch region 2660301 2660729 . - . ID=id217;Note=cspA;gbkey=misc_feature NC_008149.1 RefSeq gene 2660344 2660553 . - . ID=gene2500;Name=YPN_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12510;old_locus_tag=YPN_2376 NC_008149.1 Protein Homology CDS 2660344 2660553 . - 0 ID=cds2433;Parent=gene2500;Dbxref=Genbank:WP_002221949.1;Name=WP_002221949.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002221949.1;transl_table=11 NC_008149.1 RefSeq gene 2660596 2660712 . - . ID=gene2501;Name=YPN_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12515;old_locus_tag=YPN_2377 NC_008149.1 Protein Homology CDS 2660596 2660712 . - 0 ID=cds2434;Parent=gene2501;Dbxref=Genbank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211058.1;transl_table=11 NC_008149.1 RefSeq gene 2661478 2661699 . - . ID=gene2502;Name=YPN_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12520 NC_008149.1 Protein Homology CDS 2661478 2661699 . - 0 ID=cds2435;Parent=gene2502;Dbxref=Genbank:WP_002430102.1;Name=WP_002430102.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002430102.1;transl_table=11 NC_008149.1 RefSeq gene 2661714 2662313 . + . ID=gene2503;Name=YPN_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12525;old_locus_tag=YPN_2378 NC_008149.1 Protein Homology CDS 2661714 2662313 . + 0 ID=cds2436;Parent=gene2503;Dbxref=Genbank:WP_002221007.1;Name=WP_002221007.1;gbkey=CDS;product=lipid A palmitoyltransferase PagP;protein_id=WP_002221007.1;transl_table=11 NC_008149.1 RefSeq gene 2662618 2663991 . - . ID=gene2504;Name=YPN_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12530;old_locus_tag=YPN_2379 NC_008149.1 Protein Homology CDS 2662618 2663991 . - 0 ID=cds2437;Parent=gene2504;Dbxref=Genbank:WP_002211055.1;Name=WP_002211055.1;gbkey=CDS;product=aromatic amino acid transporter;protein_id=WP_002211055.1;transl_table=11 NC_008149.1 RefSeq gene 2664228 2664473 . - . ID=gene2505;Name=YPN_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12535;old_locus_tag=YPN_2380 NC_008149.1 Protein Homology CDS 2664228 2664473 . - 0 ID=cds2438;Parent=gene2505;Dbxref=Genbank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211054.1;transl_table=11 NC_008149.1 RefSeq gene 2664582 2664881 . - . ID=gene2506;Name=YPN_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12540;old_locus_tag=YPN_2381 NC_008149.1 Protein Homology CDS 2664582 2664881 . - 0 ID=cds2439;Parent=gene2506;Dbxref=Genbank:WP_002211053.1;Name=WP_002211053.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211053.1;transl_table=11 NC_008149.1 RefSeq gene 2665144 2665419 . - . ID=gene2507;Name=YPN_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12545;old_locus_tag=YPN_2382 NC_008149.1 Protein Homology CDS 2665144 2665419 . - 0 ID=cds2440;Parent=gene2507;Dbxref=Genbank:WP_002216495.1;Name=WP_002216495.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216495.1;transl_table=11 NC_008149.1 RefSeq gene 2666002 2666235 . + . ID=gene2508;Name=YPN_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12550;old_locus_tag=YPN_2383 NC_008149.1 Protein Homology CDS 2666002 2666235 . + 0 ID=cds2441;Parent=gene2508;Dbxref=Genbank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216493.1;transl_table=11 NC_008149.1 RefSeq gene 2666326 2666565 . - . ID=gene2509;Name=YPN_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12555;old_locus_tag=YPN_2384 NC_008149.1 Protein Homology CDS 2666326 2666565 . - 0 ID=cds2442;Parent=gene2509;Dbxref=Genbank:WP_002211050.1;Name=WP_002211050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211050.1;transl_table=11 NC_008149.1 RefSeq gene 2666777 2666890 . - . ID=gene2510;Name=YPN_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12560 NC_008149.1 Protein Homology CDS 2666777 2666890 . - 0 ID=cds2443;Parent=gene2510;Dbxref=Genbank:WP_002211049.1;Name=WP_002211049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211049.1;transl_table=11 NC_008149.1 RefSeq gene 2667121 2667507 . + . ID=gene2511;Name=YPN_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12565;old_locus_tag=YPN_2385 NC_008149.1 Protein Homology CDS 2667121 2667507 . + 0 ID=cds2444;Parent=gene2511;Dbxref=Genbank:WP_002211048.1;Name=WP_002211048.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002211048.1;transl_table=11 NC_008149.1 RefSeq gene 2667589 2667753 . - . ID=gene2512;Name=YPN_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12570;old_locus_tag=YPN_2386 NC_008149.1 Protein Homology CDS 2667589 2667753 . - 0 ID=cds2445;Parent=gene2512;Dbxref=Genbank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211047.1;transl_table=11 NC_008149.1 RefSeq gene 2668409 2670127 . + . ID=gene2513;Name=YPN_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12575;old_locus_tag=YPN_2387 NC_008149.1 Protein Homology CDS 2668409 2670127 . + 0 ID=cds2446;Parent=gene2513;Dbxref=Genbank:WP_002211045.1;Name=WP_002211045.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211045.1;transl_table=11 NC_008149.1 RefSeq gene 2670230 2671081 . + . ID=gene2514;Name=YPN_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12580;old_locus_tag=YPN_2388 NC_008149.1 Protein Homology CDS 2670230 2671081 . + 0 ID=cds2447;Parent=gene2514;Dbxref=Genbank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;product=RIO1 family protein kinase;protein_id=WP_002211044.1;transl_table=11 NC_008149.1 RefSeq gene 2671318 2671602 . + . ID=gene2515;Name=YPN_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12585;old_locus_tag=YPN_2389 NC_008149.1 Protein Homology CDS 2671318 2671602 . + 0 ID=cds2448;Parent=gene2515;Dbxref=Genbank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211043.1;transl_table=11 NC_008149.1 RefSeq gene 2671992 2672804 . + . ID=gene2516;Name=YPN_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12590;old_locus_tag=YPN_2390 NC_008149.1 Protein Homology CDS 2671992 2672804 . + 0 ID=cds2449;Parent=gene2516;Dbxref=Genbank:WP_002211042.1;Name=WP_002211042.1;Note=Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc;gbkey=CDS;product=protein MtfA;protein_id=WP_002211042.1;transl_table=11 NC_008149.1 RefSeq gene 2672982 2673057 . + . ID=gene2517;Name=YPN_RS12595;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS12595;old_locus_tag=YPN_r074 NC_008149.1 tRNAscan-SE tRNA 2672982 2673057 . + . ID=rna64;Parent=gene2517;anticodon=(pos:2673015..2673017);gbkey=tRNA;product=tRNA-Asn NC_008149.1 tRNAscan-SE exon 2672982 2673057 . + . ID=id218;Parent=rna64;anticodon=(pos:2673015..2673017);gbkey=tRNA;product=tRNA-Asn NC_008149.1 RefSeq gene 2673205 2673462 . - . ID=gene2518;Name=YPN_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12600;old_locus_tag=YPN_2391 NC_008149.1 Protein Homology CDS 2673205 2673462 . - 0 ID=cds2450;Parent=gene2518;Dbxref=Genbank:WP_002224323.1;Name=WP_002224323.1;gbkey=CDS;product=ThuR%2C regulatory protein for trehalosemaltose transport;protein_id=WP_002224323.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2673409 2675368 . + . ID=id219;gbkey=repeat_region NC_008149.1 RefSeq gene 2673478 2673771 . - . ID=gene2519;Name=YPN_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12605;old_locus_tag=YPN_2392 NC_008149.1 Protein Homology CDS 2673478 2673771 . - 0 ID=cds2451;Parent=gene2519;Dbxref=Genbank:WP_000035465.1;Name=WP_000035465.1;gbkey=CDS;product=transposase;protein_id=WP_000035465.1;transl_table=11 NC_008149.1 RefSeq gene 2673823 2674257 . - . ID=gene2520;Name=YPN_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12610;old_locus_tag=YPN_2393 NC_008149.1 Protein Homology CDS 2673823 2674257 . - 0 ID=cds2452;Parent=gene2520;Dbxref=Genbank:WP_011566190.1;Name=WP_011566190.1;gbkey=CDS;product=ATPase AAA;protein_id=WP_011566190.1;transl_table=11 NC_008149.1 RefSeq gene 2674257 2675279 . - . ID=gene2521;Name=YPN_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12615;old_locus_tag=YPN_2394 NC_008149.1 Protein Homology CDS 2674257 2675279 . - 0 ID=cds2453;Parent=gene2521;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 2675293 2676180 . - . ID=gene2522;Name=YPN_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12620;old_locus_tag=YPN_2395 NC_008149.1 Protein Homology CDS 2675293 2676180 . - 0 ID=cds2454;Parent=gene2522;Dbxref=Genbank:WP_002216469.1;Name=WP_002216469.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216469.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2676613 2677941 . + . ID=id220;gbkey=repeat_region NC_008149.1 RefSeq gene 2676655 2677863 . - . ID=gene2523;Name=YPN_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12625;old_locus_tag=YPN_2396 NC_008149.1 Protein Homology CDS 2676655 2677863 . - 0 ID=cds2455;Parent=gene2523;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 2677888 2679165 . + . ID=gene2524;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=YPN_RS12630;old_locus_tag=YPN_2397 NC_008149.1 Protein Homology CDS 2677888 2679165 . + 0 ID=cds2456;Parent=gene2524;Dbxref=Genbank:WP_042468818.1;Name=WP_042468818.1;Note=lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;gbkey=CDS;gene=lacY;product=galactoside permease;protein_id=WP_042468818.1;transl_table=11 NC_008149.1 RefSeq gene 2679243 2681369 . + . ID=gene2525;Name=YPN_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12635;old_locus_tag=YPN_2398 NC_008149.1 Protein Homology CDS 2679243 2681369 . + 0 ID=cds2457;Parent=gene2525;Dbxref=Genbank:WP_002213113.1;Name=WP_002213113.1;gbkey=CDS;product=alpha-galactosidase;protein_id=WP_002213113.1;transl_table=11 NC_008149.1 RefSeq gene 2681386 2681550 . + . ID=gene2526;Name=YPN_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12640 NC_008149.1 Protein Homology CDS 2681386 2681550 . + 0 ID=cds2458;Parent=gene2526;Dbxref=Genbank:WP_002216586.1;Name=WP_002216586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216586.1;transl_table=11 NC_008149.1 RefSeq gene 2681756 2682496 . - . ID=gene2527;Name=YPN_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12645;old_locus_tag=YPN_2400 NC_008149.1 Protein Homology CDS 2681756 2682496 . - 0 ID=cds2459;Parent=gene2527;Dbxref=Genbank:WP_002213120.1;Name=WP_002213120.1;gbkey=CDS;product=4'-phosphopantetheinyl transferase;protein_id=WP_002213120.1;transl_table=11 NC_008149.1 RefSeq gene 2683019 2684011 . + . ID=gene2528;Name=YPN_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12650;old_locus_tag=YPN_2401 NC_008149.1 Protein Homology CDS 2683019 2684011 . + 0 ID=cds2460;Parent=gene2528;Dbxref=Genbank:WP_002213121.1;Name=WP_002213121.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213121.1;transl_table=11 NC_008149.1 RefSeq gene 2684135 2684641 . + . ID=gene2529;Name=YPN_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12655;old_locus_tag=YPN_2402 NC_008149.1 Protein Homology CDS 2684135 2684641 . + 0 ID=cds2461;Parent=gene2529;Dbxref=Genbank:WP_002213122.1;Name=WP_002213122.1;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002213122.1;transl_table=11 NC_008149.1 RefSeq gene 2684661 2685953 . + . ID=gene2530;Name=YPN_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12660;old_locus_tag=YPN_2403 NC_008149.1 Protein Homology CDS 2684661 2685953 . + 0 ID=cds2462;Parent=gene2530;Dbxref=Genbank:WP_002213124.1;Name=WP_002213124.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213124.1;transl_table=11 NC_008149.1 RefSeq gene 2686211 2686840 . + . ID=gene2531;Name=YPN_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12665;old_locus_tag=YPN_2404 NC_008149.1 Protein Homology CDS 2686211 2686840 . + 0 ID=cds2463;Parent=gene2531;Dbxref=Genbank:WP_002213125.1;Name=WP_002213125.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213125.1;transl_table=11 NC_008149.1 RefSeq gene 2687286 2687361 . + . ID=gene2532;Name=YPN_RS12670;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS12670;old_locus_tag=YPN_r075 NC_008149.1 tRNAscan-SE tRNA 2687286 2687361 . + . ID=rna65;Parent=gene2532;anticodon=(pos:2687319..2687321);gbkey=tRNA;product=tRNA-Asn NC_008149.1 tRNAscan-SE exon 2687286 2687361 . + . ID=id221;Parent=rna65;anticodon=(pos:2687319..2687321);gbkey=tRNA;product=tRNA-Asn NC_008149.1 RefSeq gene 2687707 2688246 . - . ID=gene2533;Name=YPN_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12675;old_locus_tag=YPN_2405 NC_008149.1 Protein Homology CDS 2687707 2688246 . - 0 ID=cds2464;Parent=gene2533;Dbxref=Genbank:WP_002211926.1;Name=WP_002211926.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211926.1;transl_table=11 NC_008149.1 RefSeq gene 2688336 2689031 . - . ID=gene2534;Name=YPN_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12680;old_locus_tag=YPN_2406 NC_008149.1 Protein Homology CDS 2688336 2689031 . - 0 ID=cds2465;Parent=gene2534;Dbxref=Genbank:WP_002217591.1;Name=WP_002217591.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217591.1;transl_table=11 NC_008149.1 RefSeq gene 2689608 2690489 . + . ID=gene2535;Name=YPN_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12685;old_locus_tag=YPN_2407 NC_008149.1 Protein Homology CDS 2689608 2690489 . + 0 ID=cds2466;Parent=gene2535;Dbxref=Genbank:WP_002211923.1;Name=WP_002211923.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211923.1;transl_table=11 NC_008149.1 RefSeq gene 2690525 2691865 . + . ID=gene2536;Name=YPN_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12690;old_locus_tag=YPN_2408 NC_008149.1 Protein Homology CDS 2690525 2691865 . + 0 ID=cds2467;Parent=gene2536;Dbxref=Genbank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;product=sugar transporter;protein_id=WP_002211922.1;transl_table=11 NC_008149.1 RefSeq gene 2691893 2693290 . - . ID=gene2537;Name=YPN_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12695;old_locus_tag=YPN_2409 NC_008149.1 Protein Homology CDS 2691893 2693290 . - 0 ID=cds2468;Parent=gene2537;Dbxref=Genbank:WP_002354070.1;Name=WP_002354070.1;gbkey=CDS;product=MATE family multidrug exporter;protein_id=WP_002354070.1;transl_table=11 NC_008149.1 RefSeq gene 2693617 2694984 . + . ID=gene2538;Name=YPN_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12700;old_locus_tag=YPN_2410 NC_008149.1 Protein Homology CDS 2693617 2694984 . + 0 ID=cds2469;Parent=gene2538;Dbxref=Genbank:WP_002211920.1;Name=WP_002211920.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;product=argininosuccinate synthase;protein_id=WP_002211920.1;transl_table=11 NC_008149.1 RefSeq gene 2695189 2696334 . - . ID=gene2539;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=YPN_RS12705;old_locus_tag=YPN_2411 NC_008149.1 Protein Homology CDS 2695189 2696334 . - 0 ID=cds2470;Parent=gene2539;Dbxref=Genbank:WP_002211919.1;Name=WP_002211919.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=lactate dehydrogenase;protein_id=WP_002211919.1;transl_table=11 NC_008149.1 RefSeq gene 2696631 2697908 . - . ID=gene2540;Name=YPN_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12710;old_locus_tag=YPN_2412 NC_008149.1 Protein Homology CDS 2696631 2697908 . - 0 ID=cds2471;Parent=gene2540;Dbxref=Genbank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;product=fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11 NC_008149.1 RefSeq gene 2697940 2698782 . - . ID=gene2541;Name=YPN_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12715;old_locus_tag=YPN_2413 NC_008149.1 Protein Homology CDS 2697940 2698782 . - 0 ID=cds2472;Parent=gene2541;Dbxref=Genbank:WP_002211916.1;Name=WP_002211916.1;gbkey=CDS;product=hydrolase;protein_id=WP_002211916.1;transl_table=11 NC_008149.1 RefSeq gene 2698830 2699570 . - . ID=gene2542;Name=YPN_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12720;old_locus_tag=YPN_2414 NC_008149.1 Protein Homology CDS 2698830 2699570 . - 0 ID=cds2473;Parent=gene2542;Dbxref=Genbank:WP_002216393.1;Name=WP_002216393.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216393.1;transl_table=11 NC_008149.1 RefSeq gene 2699998 2700420 . + . ID=gene2543;Name=YPN_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12725;old_locus_tag=YPN_2415 NC_008149.1 Protein Homology CDS 2699998 2700420 . + 0 ID=cds2474;Parent=gene2543;Dbxref=Genbank:WP_002211912.1;Name=WP_002211912.1;gbkey=CDS;product=thiol-disulfide oxidoreductase;protein_id=WP_002211912.1;transl_table=11 NC_008149.1 RefSeq gene 2700429 2701733 . - . ID=gene2544;Name=YPN_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12730;old_locus_tag=YPN_2416 NC_008149.1 Protein Homology CDS 2700429 2701733 . - 0 ID=cds2475;Parent=gene2544;Dbxref=Genbank:WP_002211911.1;Name=WP_002211911.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211911.1;transl_table=11 NC_008149.1 RefSeq gene 2702758 2705910 . + . ID=gene2545;Name=YPN_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12735;old_locus_tag=YPN_2418 NC_008149.1 Protein Homology CDS 2702758 2705910 . + 0 ID=cds2476;Parent=gene2545;Dbxref=Genbank:WP_002216388.1;Name=WP_002216388.1;gbkey=CDS;product=adhesin;protein_id=WP_002216388.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2705835 2707154 . + . ID=id222;gbkey=repeat_region NC_008149.1 RefSeq gene 2705873 2707081 . - . ID=gene2546;Name=YPN_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12740;old_locus_tag=YPN_2419 NC_008149.1 Protein Homology CDS 2705873 2707081 . - 0 ID=cds2477;Parent=gene2546;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 2707452 2707769 . - . ID=gene2547;Name=YPN_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12745;old_locus_tag=YPN_2420 NC_008149.1 Protein Homology CDS 2707452 2707769 . - 0 ID=cds2478;Parent=gene2547;Dbxref=Genbank:WP_002217522.1;Name=WP_002217522.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217522.1;transl_table=11 NC_008149.1 RefSeq gene 2708203 2709312 . - . ID=gene2548;Name=YPN_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12750;old_locus_tag=YPN_2421 NC_008149.1 Protein Homology CDS 2708203 2709312 . - 0 ID=cds2479;Parent=gene2548;Dbxref=Genbank:WP_002211905.1;Name=WP_002211905.1;gbkey=CDS;product=thiamine biosynthesis protein ThiF;protein_id=WP_002211905.1;transl_table=11 NC_008149.1 RefSeq gene 2709605 2711035 . + . ID=gene2549;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=YPN_RS12755;old_locus_tag=YPN_2422 NC_008149.1 Protein Homology CDS 2709605 2711035 . + 0 ID=cds2480;Parent=gene2549;Dbxref=Genbank:WP_002228562.1;Name=WP_002228562.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=WP_002228562.1;transl_table=11 NC_008149.1 RefSeq gene 2711772 2713163 . - . ID=gene2550;Name=YPN_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12760;old_locus_tag=YPN_2423 NC_008149.1 Protein Homology CDS 2711772 2713163 . - 0 ID=cds2481;Parent=gene2550;Dbxref=Genbank:WP_002211902.1;Name=WP_002211902.1;gbkey=CDS;product=putrescine/spermidine ABC transporter;protein_id=WP_002211902.1;transl_table=11 NC_008149.1 RefSeq gene 2713153 2713368 . - . ID=gene2551;Name=YPN_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12765 NC_008149.1 Protein Homology CDS 2713153 2713368 . - 0 ID=cds2482;Parent=gene2551;Dbxref=Genbank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11 NC_008149.1 RefSeq gene 2713623 2714714 . - . ID=gene2552;Name=YPN_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12770;old_locus_tag=YPN_2424 NC_008149.1 Protein Homology CDS 2713623 2714714 . - 0 ID=cds2483;Parent=gene2552;Dbxref=Genbank:WP_002216312.1;Name=WP_002216312.1;Note=member of the iron-containing alcohol dehydrogenase family;gbkey=CDS;product=oxidoreductase;protein_id=WP_002216312.1;transl_table=11 NC_008149.1 RefSeq gene 2715000 2715893 . + . ID=gene2553;Name=YPN_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12775;old_locus_tag=YPN_2425 NC_008149.1 Protein Homology CDS 2715000 2715893 . + 0 ID=cds2484;Parent=gene2553;Dbxref=Genbank:WP_002216311.1;Name=WP_002216311.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216311.1;transl_table=11 NC_008149.1 RefSeq gene 2715851 2716540 . + . ID=gene2554;Name=YPN_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12780;old_locus_tag=YPN_2426 NC_008149.1 Protein Homology CDS 2715851 2716540 . + 0 ID=cds2485;Parent=gene2554;Dbxref=Genbank:WP_002216310.1;Name=WP_002216310.1;gbkey=CDS;product=sugar ABC transporter;protein_id=WP_002216310.1;transl_table=11 NC_008149.1 RefSeq gene 2716537 2717532 . + . ID=gene2555;Name=YPN_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12785;old_locus_tag=YPN_2427 NC_008149.1 Protein Homology CDS 2716537 2717532 . + 0 ID=cds2486;Parent=gene2555;Dbxref=Genbank:WP_002211900.1;Name=WP_002211900.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002211900.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2717762 2717868 . + . ID=id223;gbkey=repeat_region NC_008149.1 RefSeq gene 2717777 2718211 . + . ID=gene2556;Name=YPN_RS12790;gbkey=Gene;gene_biotype=other;locus_tag=YPN_RS12790;old_locus_tag=YPN_2428 NC_008149.1 RefSeq gene 2718366 2719193 . - . ID=gene2557;Name=YPN_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12795;old_locus_tag=YPN_2429 NC_008149.1 Protein Homology CDS 2718366 2719193 . - 0 ID=cds2487;Parent=gene2557;Dbxref=Genbank:WP_002211898.1;Name=WP_002211898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211898.1;transl_table=11 NC_008149.1 RefSeq gene 2719899 2720798 . + . ID=gene2558;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=YPN_RS12800;old_locus_tag=YPN_2430 NC_008149.1 Protein Homology CDS 2719899 2720798 . + 0 ID=cds2488;Parent=gene2558;Dbxref=Genbank:WP_002211896.1;Name=WP_002211896.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11 NC_008149.1 RefSeq gene 2720802 2722133 . + . ID=gene2559;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=YPN_RS12805;old_locus_tag=YPN_2431 NC_008149.1 Protein Homology CDS 2720802 2722133 . + 0 ID=cds2489;Parent=gene2559;Dbxref=Genbank:WP_002211895.1;Name=WP_002211895.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_002211895.1;transl_table=11 NC_008149.1 RefSeq gene 2722136 2723284 . + . ID=gene2560;Name=YPN_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12810;old_locus_tag=YPN_2432 NC_008149.1 Protein Homology CDS 2722136 2723284 . + 0 ID=cds2490;Parent=gene2560;Dbxref=Genbank:WP_002211894.1;Name=WP_002211894.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_002211894.1;transl_table=11 NC_008149.1 RefSeq gene 2723281 2724348 . + . ID=gene2561;Name=YPN_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12815;old_locus_tag=YPN_2433 NC_008149.1 Protein Homology CDS 2723281 2724348 . + 0 ID=cds2491;Parent=gene2561;Dbxref=Genbank:WP_002211893.1;Name=WP_002211893.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisB;protein_id=WP_002211893.1;transl_table=11 NC_008149.1 RefSeq gene 2724348 2724938 . + . ID=gene2562;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=YPN_RS12820;old_locus_tag=YPN_2435 NC_008149.1 Protein Homology CDS 2724348 2724938 . + 0 ID=cds2492;Parent=gene2562;Dbxref=Genbank:WP_002211892.1;Name=WP_002211892.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11 NC_008149.1 RefSeq gene 2724944 2725681 . + . ID=gene2563;Name=YPN_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12825;old_locus_tag=YPN_2436 NC_008149.1 Protein Homology CDS 2724944 2725681 . + 0 ID=cds2493;Parent=gene2563;Dbxref=Genbank:WP_002211891.1;Name=WP_002211891.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_002211891.1;transl_table=11 NC_008149.1 RefSeq gene 2725663 2726439 . + . ID=gene2564;Name=YPN_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12830;old_locus_tag=YPN_2437 NC_008149.1 Protein Homology CDS 2725663 2726439 . + 0 ID=cds2494;Parent=gene2564;Dbxref=Genbank:WP_002211890.1;Name=WP_002211890.1;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_002211890.1;transl_table=11 NC_008149.1 RefSeq gene 2726433 2727047 . + . ID=gene2565;Name=YPN_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12835;old_locus_tag=YPN_2438 NC_008149.1 Protein Homology CDS 2726433 2727047 . + 0 ID=cds2495;Parent=gene2565;Dbxref=Genbank:WP_002211889.1;Name=WP_002211889.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=histidine biosynthesis bifunctional protein HisIE;protein_id=WP_002211889.1;transl_table=11 NC_008149.1 RefSeq gene 2727247 2728656 . - . ID=gene2566;Name=YPN_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12840;old_locus_tag=YPN_2439 NC_008149.1 Protein Homology CDS 2727247 2728656 . - 0 ID=cds2496;Parent=gene2566;Dbxref=Genbank:WP_002211888.1;Name=WP_002211888.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_002211888.1;transl_table=11 NC_008149.1 RefSeq gene 2729042 2729935 . - . ID=gene2567;Name=YPN_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12845;old_locus_tag=YPN_2440 NC_008149.1 Protein Homology CDS 2729042 2729935 . - 0 ID=cds2497;Parent=gene2567;Dbxref=Genbank:WP_002211887.1;Name=WP_002211887.1;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211887.1;transl_table=11 NC_008149.1 RefSeq gene 2730019 2730909 . - . ID=gene2568;Name=YPN_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12850;old_locus_tag=YPN_2441 NC_008149.1 Protein Homology CDS 2730019 2730909 . - 0 ID=cds2498;Parent=gene2568;Dbxref=Genbank:WP_002211886.1;Name=WP_002211886.1;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;gbkey=CDS;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002211886.1;transl_table=11 NC_008149.1 RefSeq gene 2731855 2733669 . + . ID=gene2569;Name=YPN_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12855;old_locus_tag=YPN_2442 NC_008149.1 Protein Homology CDS 2731855 2733669 . + 0 ID=cds2499;Parent=gene2569;Dbxref=Genbank:WP_002211884.1;Name=WP_002211884.1;gbkey=CDS;product=siderophore biosynthesis protein%2C IucA/IucC family;protein_id=WP_002211884.1;transl_table=11 NC_008149.1 RefSeq gene 2733882 2736143 . + . ID=gene2570;Name=YPN_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12860;old_locus_tag=YPN_2443 NC_008149.1 Protein Homology CDS 2733882 2736143 . + 0 ID=cds2500;Parent=gene2570;Dbxref=Genbank:WP_002211883.1;Name=WP_002211883.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002211883.1;transl_table=11 NC_008149.1 RefSeq gene 2736233 2737312 . + . ID=gene2571;Name=YPN_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12865;old_locus_tag=YPN_2444 NC_008149.1 Protein Homology CDS 2736233 2737312 . + 0 ID=cds2501;Parent=gene2571;Dbxref=Genbank:WP_002211882.1;Name=WP_002211882.1;gbkey=CDS;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_002211882.1;transl_table=11 NC_008149.1 RefSeq gene 2737309 2738349 . + . ID=gene2572;Name=YPN_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12870;old_locus_tag=YPN_2445 NC_008149.1 Protein Homology CDS 2737309 2738349 . + 0 ID=cds2502;Parent=gene2572;Dbxref=Genbank:WP_002211881.1;Name=WP_002211881.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211881.1;transl_table=11 NC_008149.1 RefSeq gene 2738336 2739376 . + . ID=gene2573;Name=YPN_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12875;old_locus_tag=YPN_2446 NC_008149.1 Protein Homology CDS 2738336 2739376 . + 0 ID=cds2503;Parent=gene2573;Dbxref=Genbank:WP_002211880.1;Name=WP_002211880.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002211880.1;transl_table=11 NC_008149.1 RefSeq gene 2739403 2740221 . + . ID=gene2574;Name=YPN_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12880;old_locus_tag=YPN_2447 NC_008149.1 Protein Homology CDS 2739403 2740221 . + 0 ID=cds2504;Parent=gene2574;Dbxref=Genbank:WP_002211879.1;Name=WP_002211879.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;product=ABC transporter;protein_id=WP_002211879.1;transl_table=11 NC_008149.1 RefSeq gene 2740330 2742174 . - . ID=gene2575;Name=YPN_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12885;old_locus_tag=YPN_2448 NC_008149.1 Protein Homology CDS 2740330 2742174 . - 0 ID=cds2505;Parent=gene2575;Dbxref=Genbank:WP_002215001.1;Name=WP_002215001.1;gbkey=CDS;product=siderophore biosynthetic enzyme;protein_id=WP_002215001.1;transl_table=11 NC_008149.1 RefSeq gene 2742171 2742749 . - . ID=gene2576;Name=YPN_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12890;old_locus_tag=YPN_2449 NC_008149.1 Protein Homology CDS 2742171 2742749 . - 0 ID=cds2506;Parent=gene2576;Dbxref=Genbank:WP_002214999.1;Name=WP_002214999.1;gbkey=CDS;product=siderophore biosynthesis protein;protein_id=WP_002214999.1;transl_table=11 NC_008149.1 RefSeq gene 2742749 2744047 . - . ID=gene2577;Name=YPN_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12895;old_locus_tag=YPN_2450 NC_008149.1 Protein Homology CDS 2742749 2744047 . - 0 ID=cds2507;Parent=gene2577;Dbxref=Genbank:WP_002211878.1;Name=WP_002211878.1;gbkey=CDS;product=lysine N6-hydroxylase/L-ornithine N5-oxygenase family;protein_id=WP_002211878.1;transl_table=11 NC_008149.1 RefSeq gene 2744082 2745629 . - . ID=gene2578;Name=YPN_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12900;old_locus_tag=YPN_2451 NC_008149.1 Protein Homology CDS 2744082 2745629 . - 0 ID=cds2508;Parent=gene2578;Dbxref=Genbank:WP_002211877.1;Name=WP_002211877.1;gbkey=CDS;product=cytochrome C biogenesis protein CcmH;protein_id=WP_002211877.1;transl_table=11 NC_008149.1 RefSeq gene 2745781 2746560 . - . ID=gene2579;Name=YPN_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12905;old_locus_tag=YPN_2452 NC_008149.1 Protein Homology CDS 2745781 2746560 . - 0 ID=cds2509;Parent=gene2579;Dbxref=Genbank:WP_002211876.1;Name=WP_002211876.1;gbkey=CDS;product=iron reductase;protein_id=WP_002211876.1;transl_table=11 NC_008149.1 RefSeq gene 2747002 2748615 . + . ID=gene2580;Name=YPN_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12910;old_locus_tag=YPN_2453 NC_008149.1 Protein Homology CDS 2747002 2748615 . + 0 ID=cds2510;Parent=gene2580;Dbxref=Genbank:WP_002223436.1;Name=WP_002223436.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223436.1;transl_table=11 NC_008149.1 RefSeq gene 2748760 2750616 . - . ID=gene2581;Name=YPN_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12915;old_locus_tag=YPN_2454 NC_008149.1 Protein Homology CDS 2748760 2750616 . - 0 ID=cds2511;Parent=gene2581;Dbxref=Genbank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;product=membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11 NC_008149.1 RefSeq gene 2750803 2751384 . - . ID=gene2582;Name=YPN_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12920;old_locus_tag=YPN_2455 NC_008149.1 Protein Homology CDS 2750803 2751384 . - 0 ID=cds2512;Parent=gene2582;Dbxref=Genbank:WP_002211873.1;Name=WP_002211873.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_002211873.1;transl_table=11 NC_008149.1 RefSeq gene 2751489 2752130 . - . ID=gene2583;Name=YPN_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12925;old_locus_tag=YPN_2456 NC_008149.1 Protein Homology CDS 2751489 2752130 . - 0 ID=cds2513;Parent=gene2583;Dbxref=Genbank:WP_002211872.1;Name=WP_002211872.1;gbkey=CDS;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11 NC_008149.1 RefSeq gene 2752375 2753487 . - . ID=gene2584;Name=YPN_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12930;old_locus_tag=YPN_2457 NC_008149.1 Protein Homology CDS 2752375 2753487 . - 0 ID=cds2514;Parent=gene2584;Dbxref=Genbank:WP_002211871.1;Name=WP_002211871.1;gbkey=CDS;product=ATPase;protein_id=WP_002211871.1;transl_table=11 NC_008149.1 RefSeq gene 2753752 2755779 . + . ID=gene2585;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=YPN_RS12935;old_locus_tag=YPN_2458 NC_008149.1 Protein Homology CDS 2753752 2755779 . + 0 ID=cds2515;Parent=gene2585;Dbxref=Genbank:WP_002211870.1;Name=WP_002211870.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionine--tRNA ligase;protein_id=WP_002211870.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2755832 2756555 . + . ID=id224;gbkey=repeat_region NC_008149.1 RefSeq gene 2755943 2756401 . - . ID=gene2586;Name=YPN_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12940;old_locus_tag=YPN_2459 NC_008149.1 Protein Homology CDS 2755943 2756401 . - 0 ID=cds2516;Parent=gene2586;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 2756391 2756579 . - . ID=gene2587;Name=YPN_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12945 NC_008149.1 Protein Homology CDS 2756391 2756579 . - 0 ID=cds2517;Parent=gene2587;Dbxref=Genbank:WP_011171814.1;Name=WP_011171814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171814.1;transl_table=11 NC_008149.1 RefSeq gene 2756619 2757281 . - . ID=gene2588;Name=YPN_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12950;old_locus_tag=YPN_2460 NC_008149.1 Protein Homology CDS 2756619 2757281 . - 0 ID=cds2518;Parent=gene2588;Dbxref=Genbank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228565.1;transl_table=11 NC_008149.1 RefSeq gene 2757979 2759055 . + . ID=gene2589;Name=YPN_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12955;old_locus_tag=YPN_2461 NC_008149.1 Protein Homology CDS 2757979 2759055 . + 0 ID=cds2519;Parent=gene2589;Dbxref=Genbank:WP_002211975.1;Name=WP_002211975.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002211975.1;transl_table=11 NC_008149.1 RefSeq gene 2759073 2760326 . + . ID=gene2590;Name=YPN_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12960;old_locus_tag=YPN_2462 NC_008149.1 Protein Homology CDS 2759073 2760326 . + 0 ID=cds2520;Parent=gene2590;Dbxref=Genbank:WP_002211974.1;Name=WP_002211974.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211974.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2760467 2761186 . + . ID=id225;gbkey=repeat_region NC_008149.1 RefSeq gene 2760580 2761038 . - . ID=gene2591;Name=YPN_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12965;old_locus_tag=YPN_2463 NC_008149.1 Protein Homology CDS 2760580 2761038 . - 0 ID=cds2521;Parent=gene2591;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 2761028 2761192 . - . ID=gene2592;Name=YPN_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12970 NC_008149.1 Protein Homology CDS 2761028 2761192 . - 0 ID=cds2522;Parent=gene2592;Dbxref=Genbank:WP_025471008.1;Name=WP_025471008.1;gbkey=CDS;product=transposase;protein_id=WP_025471008.1;transl_table=11 NC_008149.1 RefSeq gene 2761370 2762551 . + . ID=gene2593;Name=YPN_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12975;old_locus_tag=YPN_2464 NC_008149.1 Protein Homology CDS 2761370 2762551 . + 0 ID=cds2523;Parent=gene2593;Dbxref=Genbank:WP_002211973.1;Name=WP_002211973.1;gbkey=CDS;product=multidrug resistance protein;protein_id=WP_002211973.1;transl_table=11 NC_008149.1 RefSeq gene 2762793 2763200 . + . ID=gene2594;Name=YPN_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12980;old_locus_tag=YPN_2465 NC_008149.1 Protein Homology CDS 2762793 2763200 . + 0 ID=cds2524;Parent=gene2594;Dbxref=Genbank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211971.1;transl_table=11 NC_008149.1 RefSeq gene 2763197 2763892 . + . ID=gene2595;Name=YPN_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12985;old_locus_tag=YPN_2466 NC_008149.1 Protein Homology CDS 2763197 2763892 . + 0 ID=cds2525;Parent=gene2595;Dbxref=Genbank:WP_002211970.1;Name=WP_002211970.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211970.1;transl_table=11 NC_008149.1 RefSeq gene 2764218 2765102 . + . ID=gene2596;Name=YPN_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12990;old_locus_tag=YPN_2467 NC_008149.1 Protein Homology CDS 2764218 2765102 . + 0 ID=cds2526;Parent=gene2596;Dbxref=Genbank:WP_002211969.1;Name=WP_002211969.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;product=cytidine deaminase;protein_id=WP_002211969.1;transl_table=11 NC_008149.1 RefSeq gene 2765458 2767155 . + . ID=gene2597;Name=YPN_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS12995;old_locus_tag=YPN_2468 NC_008149.1 Protein Homology CDS 2765458 2767155 . + 0 ID=cds2527;Parent=gene2597;Dbxref=Genbank:WP_002211968.1;Name=WP_002211968.1;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;gbkey=CDS;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11 NC_008149.1 RefSeq gene 2767436 2768173 . + . ID=gene2598;Name=YPN_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13000;old_locus_tag=YPN_2469 NC_008149.1 Protein Homology CDS 2767436 2768173 . + 0 ID=cds2528;Parent=gene2598;Dbxref=Genbank:WP_002211966.1;Name=WP_002211966.1;Note=involved in vancomycin sensitivity and other barrier functions of the cell envelope;gbkey=CDS;product=vancomycin high temperature exclusion protein;protein_id=WP_002211966.1;transl_table=11 NC_008149.1 RefSeq gene 2768618 2769628 . - . ID=gene2599;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=YPN_RS13005;old_locus_tag=YPN_2470 NC_008149.1 Protein Homology CDS 2768618 2769628 . - 0 ID=cds2529;Parent=gene2599;Dbxref=Genbank:WP_002211965.1;Name=WP_002211965.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter;protein_id=WP_002211965.1;transl_table=11 NC_008149.1 RefSeq gene 2769649 2771169 . - . ID=gene2600;Name=YPN_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13010;old_locus_tag=YPN_2471 NC_008149.1 Protein Homology CDS 2769649 2771169 . - 0 ID=cds2530;Parent=gene2600;Dbxref=Genbank:WP_002211964.1;Name=WP_002211964.1;gbkey=CDS;product=galactose/methyl galactoside import ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11 NC_008149.1 RefSeq gene 2771399 2772391 . - . ID=gene2601;Name=YPN_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13015;old_locus_tag=YPN_2472 NC_008149.1 Protein Homology CDS 2771399 2772391 . - 0 ID=cds2531;Parent=gene2601;Dbxref=Genbank:WP_002211963.1;Name=WP_002211963.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;product=methyl-galactoside ABC transporter substrate-binding protein;protein_id=WP_002211963.1;transl_table=11 NC_008149.1 RefSeq gene 2773139 2774305 . - . ID=gene2602;Name=YPN_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13020;old_locus_tag=YPN_2473 NC_008149.1 Protein Homology CDS 2773139 2774305 . - 0 ID=cds2532;Parent=gene2602;Dbxref=Genbank:WP_002211961.1;Name=WP_002211961.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211961.1;transl_table=11 NC_008149.1 RefSeq gene 2774360 2775022 . - . ID=gene2603;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=YPN_RS13025;old_locus_tag=YPN_2474 NC_008149.1 Protein Homology CDS 2774360 2775022 . - 0 ID=cds2533;Parent=gene2603;Dbxref=Genbank:WP_002211960.1;Name=WP_002211960.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase 1;protein_id=WP_002211960.1;transl_table=11 NC_008149.1 RefSeq gene 2775206 2776357 . - . ID=gene2604;Name=YPN_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13030;old_locus_tag=YPN_2475 NC_008149.1 Protein Homology CDS 2775206 2776357 . - 0 ID=cds2534;Parent=gene2604;Dbxref=Genbank:WP_002211959.1;Name=WP_002211959.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211959.1;transl_table=11 NC_008149.1 RefSeq gene 2776493 2777362 . + . ID=gene2605;Name=YPN_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13035;old_locus_tag=YPN_2476 NC_008149.1 Protein Homology CDS 2776493 2777362 . + 0 ID=cds2535;Parent=gene2605;Dbxref=Genbank:WP_002211958.1;Name=WP_002211958.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002211958.1;transl_table=11 NC_008149.1 RefSeq gene 2777636 2778775 . + . ID=gene2606;Name=YPN_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13040;old_locus_tag=YPN_2477 NC_008149.1 Protein Homology CDS 2777636 2778775 . + 0 ID=cds2536;Parent=gene2606;Dbxref=Genbank:WP_002211957.1;Name=WP_002211957.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_002211957.1;transl_table=11 NC_008149.1 RefSeq gene 2778796 2779638 . + . ID=gene2607;Name=YPN_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13045;old_locus_tag=YPN_2478 NC_008149.1 Protein Homology CDS 2778796 2779638 . + 0 ID=cds2537;Parent=gene2607;Dbxref=Genbank:WP_002211956.1;Name=WP_002211956.1;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=WP_002211956.1;transl_table=11 NC_008149.1 RefSeq gene 2779907 2780107 . + . ID=gene2608;Name=YPN_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13050 NC_008149.1 Protein Homology CDS 2779907 2780107 . + 0 ID=cds2538;Parent=gene2608;Dbxref=Genbank:WP_002211954.1;Name=WP_002211954.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211954.1;transl_table=11 NC_008149.1 RefSeq gene 2780191 2782551 . + . ID=gene2609;Name=YPN_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13055;old_locus_tag=YPN_2479 NC_008149.1 Protein Homology CDS 2780191 2782551 . + 0 ID=cds2539;Parent=gene2609;Dbxref=Genbank:WP_002215886.1;Name=WP_002215886.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215886.1;transl_table=11 NC_008149.1 RefSeq gene 2782553 2783815 . + . ID=gene2610;Name=YPN_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13060;old_locus_tag=YPN_2480 NC_008149.1 Protein Homology CDS 2782553 2783815 . + 0 ID=cds2540;Parent=gene2610;Dbxref=Genbank:WP_002211952.1;Name=WP_002211952.1;gbkey=CDS;product=RND transporter;protein_id=WP_002211952.1;transl_table=11 NC_008149.1 RefSeq gene 2783817 2784485 . + . ID=gene2611;Name=YPN_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13065;old_locus_tag=YPN_2481 NC_008149.1 Protein Homology CDS 2783817 2784485 . + 0 ID=cds2541;Parent=gene2611;Dbxref=Genbank:WP_002211951.1;Name=WP_002211951.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211951.1;transl_table=11 NC_008149.1 RefSeq gene 2784495 2785805 . + . ID=gene2612;Name=YPN_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13070;old_locus_tag=YPN_2482 NC_008149.1 Protein Homology CDS 2784495 2785805 . + 0 ID=cds2542;Parent=gene2612;Dbxref=Genbank:WP_002211950.1;Name=WP_002211950.1;gbkey=CDS;product=radical SAM/SPASM domain-containing protein;protein_id=WP_002211950.1;transl_table=11 NC_008149.1 RefSeq gene 2786340 2787614 . + . ID=gene2613;Name=YPN_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13075;old_locus_tag=YPN_2483 NC_008149.1 Protein Homology CDS 2786340 2787614 . + 0 ID=cds2543;Parent=gene2613;Dbxref=Genbank:WP_002211949.1;Name=WP_002211949.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=WP_002211949.1;transl_table=11 NC_008149.1 RefSeq gene 2787616 2788386 . + . ID=gene2614;Name=YPN_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13080;old_locus_tag=YPN_2484 NC_008149.1 Protein Homology CDS 2787616 2788386 . + 0 ID=cds2544;Parent=gene2614;Dbxref=Genbank:WP_002211948.1;Name=WP_002211948.1;gbkey=CDS;product=molybdopterin-synthase adenylyltransferase;protein_id=WP_002211948.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2788447 2789767 . + . ID=id226;gbkey=repeat_region NC_008149.1 RefSeq gene 2788522 2789730 . + . ID=gene2615;Name=YPN_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13085;old_locus_tag=YPN_2485 NC_008149.1 Protein Homology CDS 2788522 2789730 . + 0 ID=cds2545;Parent=gene2615;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 2789774 2790427 . - . ID=gene2616;Name=YPN_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13090;old_locus_tag=YPN_2486 NC_008149.1 Protein Homology CDS 2789774 2790427 . - 0 ID=cds2546;Parent=gene2616;Dbxref=Genbank:WP_002211947.1;Name=WP_002211947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211947.1;transl_table=11 NC_008149.1 RefSeq gene 2790655 2792226 . - . ID=gene2617;Name=YPN_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13095;old_locus_tag=YPN_2487 NC_008149.1 Protein Homology CDS 2790655 2792226 . - 0 ID=cds2547;Parent=gene2617;Dbxref=Genbank:WP_002354043.1;Name=WP_002354043.1;gbkey=CDS;product=heme ABC transporter ATP-binding protein;protein_id=WP_002354043.1;transl_table=11 NC_008149.1 RefSeq gene 2792933 2793556 . + . ID=gene2618;Name=YPN_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13100;old_locus_tag=YPN_2488 NC_008149.1 Protein Homology CDS 2792933 2793556 . + 0 ID=cds2548;Parent=gene2618;Dbxref=Genbank:WP_002211945.1;Name=WP_002211945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211945.1;transl_table=11 NC_008149.1 RefSeq gene 2793768 2795135 . - . ID=gene2619;Name=YPN_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13105;old_locus_tag=YPN_2489 NC_008149.1 Protein Homology CDS 2793768 2795135 . - 0 ID=cds2549;Parent=gene2619;Dbxref=Genbank:WP_002211944.1;Name=WP_002211944.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211944.1;transl_table=11 NC_008149.1 RefSeq gene 2795160 2795612 . - . ID=gene2620;Name=YPN_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13110;old_locus_tag=YPN_2490 NC_008149.1 Protein Homology CDS 2795160 2795612 . - 0 ID=cds2550;Parent=gene2620;Dbxref=Genbank:WP_002211943.1;Name=WP_002211943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211943.1;transl_table=11 NC_008149.1 RefSeq gene 2795612 2796193 . - . ID=gene2621;Name=YPN_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13115;old_locus_tag=YPN_2491 NC_008149.1 Protein Homology CDS 2795612 2796193 . - 0 ID=cds2551;Parent=gene2621;Dbxref=Genbank:WP_002214552.1;Name=WP_002214552.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002214552.1;transl_table=11 NC_008149.1 RefSeq gene 2796168 2797253 . - . ID=gene2622;Name=YPN_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13120;old_locus_tag=YPN_2492 NC_008149.1 Protein Homology CDS 2796168 2797253 . - 0 ID=cds2552;Parent=gene2622;Dbxref=Genbank:WP_002211941.1;Name=WP_002211941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211941.1;transl_table=11 NC_008149.1 RefSeq gene 2797217 2798980 . - . ID=gene2623;Name=YPN_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13125;old_locus_tag=YPN_2493 NC_008149.1 Protein Homology CDS 2797217 2798980 . - 0 ID=cds2553;Parent=gene2623;Dbxref=Genbank:WP_002211940.1;Name=WP_002211940.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002211940.1;transl_table=11 NC_008149.1 RefSeq gene 2799201 2799656 . - . ID=gene2624;Name=YPN_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13130;old_locus_tag=YPN_2494 NC_008149.1 Protein Homology CDS 2799201 2799656 . - 0 ID=cds2554;Parent=gene2624;Dbxref=Genbank:WP_002211939.1;Name=WP_002211939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211939.1;transl_table=11 NC_008149.1 RefSeq gene 2799671 2800729 . - . ID=gene2625;Name=YPN_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13135;old_locus_tag=YPN_2495 NC_008149.1 Protein Homology CDS 2799671 2800729 . - 0 ID=cds2555;Parent=gene2625;Dbxref=Genbank:WP_002211938.1;Name=WP_002211938.1;gbkey=CDS;product=PAAR domain protein;protein_id=WP_002211938.1;transl_table=11 NC_008149.1 RefSeq gene 2800747 2802348 . - . ID=gene2626;Name=YPN_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13140;old_locus_tag=YPN_2496 NC_008149.1 Protein Homology CDS 2800747 2802348 . - 0 ID=cds2556;Parent=gene2626;Dbxref=Genbank:WP_002211937.1;Name=WP_002211937.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211937.1;transl_table=11 NC_008149.1 RefSeq gene 2802392 2805814 . - . ID=gene2627;Name=YPN_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13145;old_locus_tag=YPN_2497 NC_008149.1 Protein Homology CDS 2802392 2805814 . - 0 ID=cds2557;Parent=gene2627;Dbxref=Genbank:WP_002211936.1;Name=WP_002211936.1;gbkey=CDS;product=type VI secretion protein VasK;protein_id=WP_002211936.1;transl_table=11 NC_008149.1 RefSeq gene 2805811 2807043 . - . ID=gene2628;Name=YPN_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13150;old_locus_tag=YPN_2498 NC_008149.1 Protein Homology CDS 2805811 2807043 . - 0 ID=cds2558;Parent=gene2628;Dbxref=Genbank:WP_002211935.1;Name=WP_002211935.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211935.1;transl_table=11 NC_008149.1 RefSeq gene 2808155 2808475 . + . ID=gene2629;Name=YPN_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13155;old_locus_tag=YPN_2500 NC_008149.1 Protein Homology CDS 2808155 2808475 . + 0 ID=cds2559;Parent=gene2629;Dbxref=Genbank:WP_002214561.1;Name=WP_002214561.1;gbkey=CDS;product=transposase;protein_id=WP_002214561.1;transl_table=11 NC_008149.1 RefSeq gene 2809208 2809678 . - . ID=gene2630;Name=YPN_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13160;old_locus_tag=YPN_2502 NC_008149.1 Protein Homology CDS 2809208 2809678 . - 0 ID=cds2560;Parent=gene2630;Dbxref=Genbank:WP_002214564.1;Name=WP_002214564.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214564.1;transl_table=11 NC_008149.1 RefSeq gene 2809851 2812034 . - . ID=gene2631;Name=YPN_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13165;old_locus_tag=YPN_2503 NC_008149.1 Protein Homology CDS 2809851 2812034 . - 0 ID=cds2561;Parent=gene2631;Dbxref=Genbank:WP_002211932.1;Name=WP_002211932.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211932.1;transl_table=11 NC_008149.1 RefSeq gene 2812050 2812310 . - . ID=gene2632;Name=YPN_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13170;old_locus_tag=YPN_2504 NC_008149.1 Protein Homology CDS 2812050 2812310 . - 0 ID=cds2562;Parent=gene2632;Dbxref=Genbank:WP_002211931.1;Name=WP_002211931.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211931.1;transl_table=11 NC_008149.1 RefSeq gene 2812464 2813237 . - . ID=gene2633;Name=YPN_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13175;old_locus_tag=YPN_2505 NC_008149.1 Protein Homology CDS 2812464 2813237 . - 0 ID=cds2563;Parent=gene2633;Dbxref=Genbank:WP_002211930.1;Name=WP_002211930.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211930.1;transl_table=11 NC_008149.1 RefSeq gene 2813234 2815534 . - . ID=gene2634;Name=YPN_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13180;old_locus_tag=YPN_2506 NC_008149.1 Protein Homology CDS 2813234 2815534 . - 0 ID=cds2564;Parent=gene2634;Dbxref=Genbank:WP_002211929.1;Name=WP_002211929.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211929.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2814068 2816191 . + . ID=id227;gbkey=repeat_region NC_008149.1 RefSeq gene 2815550 2817898 . - . ID=gene2635;Name=YPN_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13185;old_locus_tag=YPN_2507 NC_008149.1 Protein Homology CDS 2815550 2817898 . - 0 ID=cds2565;Parent=gene2635;Dbxref=Genbank:WP_002211928.1;Name=WP_002211928.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002211928.1;transl_table=11 NC_008149.1 RefSeq gene 2817901 2820543 . - . ID=gene2636;Name=YPN_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13190;old_locus_tag=YPN_2508 NC_008149.1 Protein Homology CDS 2817901 2820543 . - 0 ID=cds2566;Parent=gene2636;Dbxref=Genbank:WP_002211927.1;Name=WP_002211927.1;gbkey=CDS;product=ATPase;protein_id=WP_002211927.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2818858 2820562 . + . ID=id228;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 2820855 2827723 . + . ID=id229;gbkey=repeat_region NC_008149.1 RefSeq gene 2820931 2821422 . - . ID=gene2637;Name=YPN_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13195;old_locus_tag=YPN_2509 NC_008149.1 Protein Homology CDS 2820931 2821422 . - 0 ID=cds2567;Parent=gene2637;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_008149.1 RefSeq gene 2821426 2823162 . - . ID=gene2638;Name=YPN_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13200;old_locus_tag=YPN_2510 NC_008149.1 Protein Homology CDS 2821426 2823162 . - 0 ID=cds2568;Parent=gene2638;Dbxref=Genbank:WP_002228049.1;Name=WP_002228049.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228049.1;transl_table=11 NC_008149.1 RefSeq gene 2823162 2823848 . - . ID=gene2639;Name=YPN_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13205;old_locus_tag=YPN_2511 NC_008149.1 Protein Homology CDS 2823162 2823848 . - 0 ID=cds2569;Parent=gene2639;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11 NC_008149.1 RefSeq gene 2823845 2825197 . - . ID=gene2640;Name=YPN_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13210;old_locus_tag=YPN_2512 NC_008149.1 Protein Homology CDS 2823845 2825197 . - 0 ID=cds2570;Parent=gene2640;Dbxref=Genbank:WP_002211664.1;Name=WP_002211664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211664.1;transl_table=11 NC_008149.1 RefSeq gene 2825209 2826753 . - . ID=gene2641;Name=YPN_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13215;old_locus_tag=YPN_2513 NC_008149.1 Protein Homology CDS 2825209 2826753 . - 0 ID=cds2571;Parent=gene2641;Dbxref=Genbank:WP_002215896.1;Name=WP_002215896.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215896.1;transl_table=11 NC_008149.1 RefSeq gene 2826796 2827296 . - . ID=gene2642;Name=YPN_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13220;old_locus_tag=YPN_2514 NC_008149.1 Protein Homology CDS 2826796 2827296 . - 0 ID=cds2572;Parent=gene2642;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11 NC_008149.1 RefSeq gene 2827961 2828128 . - . ID=gene2643;Name=YPN_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13225 NC_008149.1 Protein Homology CDS 2827961 2828128 . - 0 ID=cds2573;Parent=gene2643;Dbxref=Genbank:WP_002214708.1;Name=WP_002214708.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214708.1;transl_table=11 NC_008149.1 RefSeq gene 2828285 2829133 . - . ID=gene2644;Name=YPN_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13230;old_locus_tag=YPN_2515 NC_008149.1 Protein Homology CDS 2828285 2829133 . - 0 ID=cds2574;Parent=gene2644;Dbxref=Genbank:WP_002213016.1;Name=WP_002213016.1;gbkey=CDS;product=acyltransferase;protein_id=WP_002213016.1;transl_table=11 NC_008149.1 RefSeq gene 2829232 2829480 . - . ID=gene2645;Name=YPN_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13235;old_locus_tag=YPN_2516 NC_008149.1 Protein Homology CDS 2829232 2829480 . - 0 ID=cds2575;Parent=gene2645;Dbxref=Genbank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;product=acyl carrier protein;protein_id=WP_002213017.1;transl_table=11 NC_008149.1 RefSeq gene 2829518 2829850 . - . ID=gene2646;Name=YPN_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13240;old_locus_tag=YPN_2517 NC_008149.1 Protein Homology CDS 2829518 2829850 . - 0 ID=cds2576;Parent=gene2646;Dbxref=Genbank:WP_002213021.1;Name=WP_002213021.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213021.1;transl_table=11 NC_008149.1 RefSeq gene 2830045 2830833 . - . ID=gene2647;Name=YPN_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13245;old_locus_tag=YPN_2518 NC_008149.1 Protein Homology CDS 2830045 2830833 . - 0 ID=cds2577;Parent=gene2647;Dbxref=Genbank:WP_002213024.1;Name=WP_002213024.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002213024.1;transl_table=11 NC_008149.1 RefSeq gene 2830836 2831588 . - . ID=gene2648;Name=YPN_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13250;old_locus_tag=YPN_2519 NC_008149.1 Protein Homology CDS 2830836 2831588 . - 0 ID=cds2578;Parent=gene2648;Dbxref=Genbank:WP_002213025.1;Name=WP_002213025.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213025.1;transl_table=11 NC_008149.1 RefSeq gene 2831590 2832309 . - . ID=gene2649;Name=YPN_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13255;old_locus_tag=YPN_2520 NC_008149.1 Protein Homology CDS 2831590 2832309 . - 0 ID=cds2579;Parent=gene2649;Dbxref=Genbank:WP_002213026.1;Name=WP_002213026.1;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=WP_002213026.1;transl_table=11 NC_008149.1 RefSeq gene 2832302 2833540 . - . ID=gene2650;Name=YPN_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13260;old_locus_tag=YPN_2521 NC_008149.1 Protein Homology CDS 2832302 2833540 . - 0 ID=cds2580;Parent=gene2650;Dbxref=Genbank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002213028.1;transl_table=11 NC_008149.1 RefSeq gene 2833556 2834293 . - . ID=gene2651;Name=YPN_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13265;old_locus_tag=YPN_2522 NC_008149.1 Protein Homology CDS 2833556 2834293 . - 0 ID=cds2581;Parent=gene2651;Dbxref=Genbank:WP_002213030.1;Name=WP_002213030.1;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=WP_002213030.1;transl_table=11 NC_008149.1 RefSeq gene 2834295 2835578 . - . ID=gene2652;Name=YPN_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13270;old_locus_tag=YPN_2523 NC_008149.1 Protein Homology CDS 2834295 2835578 . - 0 ID=cds2582;Parent=gene2652;Dbxref=Genbank:WP_002213032.1;Name=WP_002213032.1;gbkey=CDS;product=beta-ketoacyl-ACP synthase;protein_id=WP_002213032.1;transl_table=11 NC_008149.1 RefSeq gene 2835568 2836092 . - . ID=gene2653;Name=YPN_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13275;old_locus_tag=YPN_2524 NC_008149.1 Protein Homology CDS 2835568 2836092 . - 0 ID=cds2583;Parent=gene2653;Dbxref=Genbank:WP_002213034.1;Name=WP_002213034.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002213034.1;transl_table=11 NC_008149.1 RefSeq gene 2836356 2836574 . - . ID=gene2654;Name=YPN_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13280;old_locus_tag=YPN_2525 NC_008149.1 Protein Homology CDS 2836356 2836574 . - 0 ID=cds2584;Parent=gene2654;Dbxref=Genbank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11 NC_008149.1 RefSeq gene 2837305 2838051 . + . ID=gene2655;Name=YPN_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13285;old_locus_tag=YPN_2526 NC_008149.1 Protein Homology CDS 2837305 2838051 . + 0 ID=cds2585;Parent=gene2655;Dbxref=Genbank:WP_002213038.1;Name=WP_002213038.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002213038.1;transl_table=11 NC_008149.1 RefSeq gene 2838205 2840622 . + . ID=gene2656;Name=YPN_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13290;old_locus_tag=YPN_2527 NC_008149.1 Protein Homology CDS 2838205 2840622 . + 0 ID=cds2586;Parent=gene2656;Dbxref=Genbank:WP_002213039.1;Name=WP_002213039.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002213039.1;transl_table=11 NC_008149.1 RefSeq gene 2841056 2842207 . - . ID=gene2657;Name=YPN_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13295;old_locus_tag=YPN_2528 NC_008149.1 Protein Homology CDS 2841056 2842207 . - 0 ID=cds2587;Parent=gene2657;Dbxref=Genbank:WP_002358281.1;Name=WP_002358281.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002358281.1;transl_table=11 NC_008149.1 RefSeq gene 2842222 2842473 . - . ID=gene2658;Name=YPN_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13300;old_locus_tag=YPN_2529 NC_008149.1 Protein Homology CDS 2842222 2842473 . - 0 ID=cds2588;Parent=gene2658;Dbxref=Genbank:WP_002354019.1;Name=WP_002354019.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002354019.1;transl_table=11 NC_008149.1 RefSeq gene 2842507 2842863 . - . ID=gene2659;Name=YPN_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13305;old_locus_tag=YPN_2530 NC_008149.1 Protein Homology CDS 2842507 2842863 . - 0 ID=cds2589;Parent=gene2659;Dbxref=Genbank:WP_002214713.1;Name=WP_002214713.1;gbkey=CDS;product=cytotoxic necrotizing factor 1 domain protein;protein_id=WP_002214713.1;transl_table=11 NC_008149.1 RefSeq gene 2843233 2843520 . - . ID=gene2660;Name=YPN_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13310;old_locus_tag=YPN_2531 NC_008149.1 Protein Homology CDS 2843233 2843520 . - 0 ID=cds2590;Parent=gene2660;Dbxref=Genbank:WP_002228572.1;Name=WP_002228572.1;gbkey=CDS;product=integrase;protein_id=WP_002228572.1;transl_table=11 NC_008149.1 RefSeq gene 2843940 2844027 . - . ID=gene2661;Name=YPN_RS13315;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS13315;old_locus_tag=YPN_r076 NC_008149.1 tRNAscan-SE tRNA 2843940 2844027 . - . ID=rna66;Parent=gene2661;anticodon=(pos:complement(2843991..2843993));gbkey=tRNA;product=tRNA-Ser NC_008149.1 tRNAscan-SE exon 2843940 2844027 . - . ID=id230;Parent=rna66;anticodon=(pos:complement(2843991..2843993));gbkey=tRNA;product=tRNA-Ser NC_008149.1 RefSeq gene 2844268 2844597 . + . ID=gene2662;Name=YPN_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13320;old_locus_tag=YPN_2532 NC_008149.1 Protein Homology CDS 2844268 2844597 . + 0 ID=cds2591;Parent=gene2662;Dbxref=Genbank:WP_002213046.1;Name=WP_002213046.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11 NC_008149.1 RefSeq gene 2844649 2844927 . - . ID=gene2663;Name=YPN_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13325;old_locus_tag=YPN_2533 NC_008149.1 Protein Homology CDS 2844649 2844927 . - 0 ID=cds2592;Parent=gene2663;Dbxref=Genbank:WP_002213049.1;Name=WP_002213049.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11 NC_008149.1 RefSeq gene 2845021 2846211 . + . ID=gene2664;Name=YPN_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13330;old_locus_tag=YPN_2534 NC_008149.1 Protein Homology CDS 2845021 2846211 . + 0 ID=cds2593;Parent=gene2664;Dbxref=Genbank:WP_002213052.1;Name=WP_002213052.1;Note=SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase I;protein_id=WP_002213052.1;transl_table=11 NC_008149.1 RefSeq gene 2846272 2846589 . + . ID=gene2665;Name=YPN_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13335;old_locus_tag=YPN_2535 NC_008149.1 Protein Homology CDS 2846272 2846589 . + 0 ID=cds2594;Parent=gene2665;Dbxref=Genbank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_002213054.1;transl_table=11 NC_008149.1 RefSeq gene 2846698 2847114 . - . ID=gene2666;Name=YPN_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13340;old_locus_tag=YPN_2536 NC_008149.1 Protein Homology CDS 2846698 2847114 . - 0 ID=cds2595;Parent=gene2666;Dbxref=Genbank:WP_002213056.1;Name=WP_002213056.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213056.1;transl_table=11 NC_008149.1 RefSeq gene 2847430 2848110 . + . ID=gene2667;Name=YPN_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13345;old_locus_tag=YPN_2537 NC_008149.1 Protein Homology CDS 2847430 2848110 . + 0 ID=cds2596;Parent=gene2667;Dbxref=Genbank:WP_002213058.1;Name=WP_002213058.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213058.1;transl_table=11 NC_008149.1 RefSeq gene 2848289 2848753 . + . ID=gene2668;Name=YPN_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13350;old_locus_tag=YPN_2538 NC_008149.1 Protein Homology CDS 2848289 2848753 . + 0 ID=cds2597;Parent=gene2668;Dbxref=Genbank:WP_002213060.1;Name=WP_002213060.1;gbkey=CDS;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11 NC_008149.1 RefSeq gene 2848814 2850868 . - . ID=gene2669;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=YPN_RS13355;old_locus_tag=YPN_2539 NC_008149.1 Protein Homology CDS 2848814 2850868 . - 0 ID=cds2598;Parent=gene2669;Dbxref=Genbank:WP_002221095.1;Name=WP_002221095.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=WP_002221095.1;transl_table=11 NC_008149.1 RefSeq gene 2851062 2851508 . + . ID=gene2670;Name=YPN_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13360;old_locus_tag=YPN_2540 NC_008149.1 Protein Homology CDS 2851062 2851508 . + 0 ID=cds2599;Parent=gene2670;Dbxref=Genbank:WP_002213062.1;Name=WP_002213062.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213062.1;transl_table=11 NC_008149.1 RefSeq gene 2851538 2853676 . + . ID=gene2671;Name=YPN_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13365;old_locus_tag=YPN_2541 NC_008149.1 Protein Homology CDS 2851538 2853676 . + 0 ID=cds2600;Parent=gene2671;Dbxref=Genbank:WP_002213063.1;Name=WP_002213063.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213063.1;transl_table=11 NC_008149.1 RefSeq gene 2853778 2854413 . - . ID=gene2672;Name=YPN_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13370;old_locus_tag=YPN_2542 NC_008149.1 Protein Homology CDS 2853778 2854413 . - 0 ID=cds2601;Parent=gene2672;Dbxref=Genbank:WP_002213064.1;Name=WP_002213064.1;gbkey=CDS;product=DNA transformation protein tfoX;protein_id=WP_002213064.1;transl_table=11 NC_008149.1 RefSeq gene 2854642 2855148 . + . ID=gene2673;Name=YPN_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13375;old_locus_tag=YPN_2543 NC_008149.1 Protein Homology CDS 2854642 2855148 . + 0 ID=cds2602;Parent=gene2673;Dbxref=Genbank:WP_002213065.1;Name=WP_002213065.1;gbkey=CDS;product=cell division inhibitor SulA;protein_id=WP_002213065.1;transl_table=11 NC_008149.1 RefSeq gene 2855506 2856567 . + . ID=gene2674;Name=YPN_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13380;old_locus_tag=YPN_2544 NC_008149.1 Protein Homology CDS 2855506 2856567 . + 0 ID=cds2603;Parent=gene2674;Dbxref=Genbank:WP_002213066.1;Name=WP_002213066.1;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d;gbkey=CDS;product=outer membrane protein A;protein_id=WP_002213066.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2856603 2857327 . + . ID=id231;gbkey=repeat_region NC_008149.1 RefSeq gene 2856612 2856767 . + . ID=gene2675;Name=YPN_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13385 NC_008149.1 Protein Homology CDS 2856612 2856767 . + 0 ID=cds2604;Parent=gene2675;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 2856757 2857215 . + . ID=gene2676;Name=YPN_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13390;old_locus_tag=YPN_2545 NC_008149.1 Protein Homology CDS 2856757 2857215 . + 0 ID=cds2605;Parent=gene2676;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 2857384 2857839 . - . ID=gene2677;Name=YPN_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13395;old_locus_tag=YPN_2546 NC_008149.1 Protein Homology CDS 2857384 2857839 . - 0 ID=cds2606;Parent=gene2677;Dbxref=Genbank:WP_002226586.1;Name=WP_002226586.1;gbkey=CDS;product=macrodomain Ter protein;protein_id=WP_002226586.1;transl_table=11 NC_008149.1 RefSeq gene 2858050 2859801 . + . ID=gene2678;Name=YPN_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13400;old_locus_tag=YPN_2547 NC_008149.1 Protein Homology CDS 2858050 2859801 . + 0 ID=cds2607;Parent=gene2678;Dbxref=Genbank:WP_002224683.1;Name=WP_002224683.1;gbkey=CDS;product=ATP-dependent protease;protein_id=WP_002224683.1;transl_table=11 NC_008149.1 RefSeq gene 2859870 2860388 . + . ID=gene2679;Name=YPN_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13405;old_locus_tag=YPN_2548 NC_008149.1 Protein Homology CDS 2859870 2860388 . + 0 ID=cds2608;Parent=gene2679;Dbxref=Genbank:WP_002220006.1;Name=WP_002220006.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_002220006.1;transl_table=11 NC_008149.1 RefSeq gene 2860654 2860842 . - . ID=gene2680;Name=YPN_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13410 NC_008149.1 Protein Homology CDS 2860654 2860842 . - 0 ID=cds2609;Parent=gene2680;Dbxref=Genbank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211286.1;transl_table=11 NC_008149.1 RefSeq gene 2861088 2861462 . + . ID=gene2681;Name=YPN_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13415;old_locus_tag=YPN_2549 NC_008149.1 Protein Homology CDS 2861088 2861462 . + 0 ID=cds2610;Parent=gene2681;Dbxref=Genbank:WP_002211287.1;Name=WP_002211287.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211287.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2861386 2863352 . + . ID=id232;gbkey=repeat_region NC_008149.1 RefSeq gene 2861476 2862498 . + . ID=gene2682;Name=YPN_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13420;old_locus_tag=YPN_2550 NC_008149.1 Protein Homology CDS 2861476 2862498 . + 0 ID=cds2611;Parent=gene2682;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 2862498 2863277 . + . ID=gene2683;Name=YPN_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13425;old_locus_tag=YPN_2551 NC_008149.1 Protein Homology CDS 2862498 2863277 . + 0 ID=cds2612;Parent=gene2683;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 2863347 2864321 . + . ID=gene2684;Name=YPN_RS13430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS13430;old_locus_tag=YPN_2552;partial=true;pseudo=true;start_range=.,2863347 NC_008149.1 Protein Homology CDS 2863347 2864321 . + 0 ID=cds2613;Parent=gene2684;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=3-oxoacyl-ACP synthase;pseudo=true;start_range=.,2863347;transl_table=11 NC_008149.1 RefSeq repeat_region 2864326 2865046 . + . ID=id233;gbkey=repeat_region NC_008149.1 RefSeq gene 2864438 2864896 . - . ID=gene2685;Name=YPN_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13435;old_locus_tag=YPN_2553 NC_008149.1 Protein Homology CDS 2864438 2864896 . - 0 ID=cds2614;Parent=gene2685;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 2864886 2865041 . - . ID=gene2686;Name=YPN_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13440 NC_008149.1 Protein Homology CDS 2864886 2865041 . - 0 ID=cds2615;Parent=gene2686;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 2865094 2865261 . - . ID=gene2687;Name=YPN_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13445;old_locus_tag=YPN_2554 NC_008149.1 Protein Homology CDS 2865094 2865261 . - 0 ID=cds2616;Parent=gene2687;Dbxref=Genbank:WP_002228015.1;Name=WP_002228015.1;gbkey=CDS;product=ribosome modulation factor;protein_id=WP_002228015.1;transl_table=11 NC_008149.1 RefSeq gene 2865342 2865482 . - . ID=gene2688;Name=YPN_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13450 NC_008149.1 Protein Homology CDS 2865342 2865482 . - 0 ID=cds2617;Parent=gene2688;Dbxref=Genbank:WP_002217596.1;Name=WP_002217596.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217596.1;transl_table=11 NC_008149.1 RefSeq gene 2865531 2866109 . - . ID=gene2689;Name=YPN_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13455;old_locus_tag=YPN_2555 NC_008149.1 Protein Homology CDS 2865531 2866109 . - 0 ID=cds2618;Parent=gene2689;Dbxref=Genbank:WP_002211289.1;Name=WP_002211289.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002211289.1;transl_table=11 NC_008149.1 RefSeq gene 2866106 2867758 . - . ID=gene2690;Name=YPN_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13460;old_locus_tag=YPN_2556 NC_008149.1 Protein Homology CDS 2866106 2867758 . - 0 ID=cds2619;Parent=gene2690;Dbxref=Genbank:WP_002211290.1;Name=WP_002211290.1;gbkey=CDS;product=paraquat-inducible protein B;protein_id=WP_002211290.1;transl_table=11 NC_008149.1 RefSeq gene 2867745 2868962 . - . ID=gene2691;Name=YPN_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13465;old_locus_tag=YPN_2557 NC_008149.1 Protein Homology CDS 2867745 2868962 . - 0 ID=cds2620;Parent=gene2691;Dbxref=Genbank:WP_002354008.1;Name=WP_002354008.1;gbkey=CDS;product=paraquat-inducible protein A;protein_id=WP_002354008.1;transl_table=11 NC_008149.1 RefSeq gene 2869160 2871073 . - . ID=gene2692;Name=YPN_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13470;old_locus_tag=YPN_2558 NC_008149.1 Protein Homology CDS 2869160 2871073 . - 0 ID=cds2621;Parent=gene2692;Dbxref=Genbank:WP_002211292.1;Name=WP_002211292.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002211292.1;transl_table=11 NC_008149.1 RefSeq gene 2871079 2873199 . - . ID=gene2693;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=YPN_RS13475;old_locus_tag=YPN_2559 NC_008149.1 Protein Homology CDS 2871079 2873199 . - 0 ID=cds2622;Parent=gene2693;Dbxref=Genbank:WP_002211293.1;Name=WP_002211293.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=ribosomal RNA large subunit methyltransferase K/L;protein_id=WP_002211293.1;transl_table=11 NC_008149.1 RefSeq gene 2873302 2874411 . + . ID=gene2694;Name=YPN_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13480;old_locus_tag=YPN_2560 NC_008149.1 Protein Homology CDS 2873302 2874411 . + 0 ID=cds2623;Parent=gene2694;Dbxref=Genbank:WP_002363919.1;Name=WP_002363919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002363919.1;transl_table=11 NC_008149.1 RefSeq gene 2874437 2874988 . - . ID=gene2695;Name=YPN_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13485;old_locus_tag=YPN_2561 NC_008149.1 Protein Homology CDS 2874437 2874988 . - 0 ID=cds2624;Parent=gene2695;Dbxref=Genbank:WP_002211295.1;Name=WP_002211295.1;gbkey=CDS;product=cell division protein ZapC;protein_id=WP_002211295.1;transl_table=11 NC_008149.1 RefSeq gene 2875171 2876181 . - . ID=gene2696;Name=YPN_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13490;old_locus_tag=YPN_2562 NC_008149.1 Protein Homology CDS 2875171 2876181 . - 0 ID=cds2625;Parent=gene2696;Dbxref=Genbank:WP_002211296.1;Name=WP_002211296.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_002211296.1;transl_table=11 NC_008149.1 RefSeq gene 2876790 2879405 . - . ID=gene2697;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=YPN_RS13495;old_locus_tag=YPN_2563 NC_008149.1 Protein Homology CDS 2876790 2879405 . - 0 ID=cds2626;Parent=gene2697;Dbxref=Genbank:WP_002220013.1;Name=WP_002220013.1;gbkey=CDS;gene=pepN;product=aminopeptidase;protein_id=WP_002220013.1;transl_table=11 NC_008149.1 RefSeq gene 2880121 2881326 . + . ID=gene2698;Name=YPN_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13500;old_locus_tag=YPN_2564 NC_008149.1 Protein Homology CDS 2880121 2881326 . + 0 ID=cds2627;Parent=gene2698;Dbxref=Genbank:WP_002228013.1;Name=WP_002228013.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=WP_002228013.1;transl_table=11 NC_008149.1 RefSeq gene 2881825 2883225 . + . ID=gene2699;Name=YPN_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13505;old_locus_tag=YPN_2565 NC_008149.1 Protein Homology CDS 2881825 2883225 . + 0 ID=cds2628;Parent=gene2699;Dbxref=Genbank:WP_002211301.1;Name=WP_002211301.1;gbkey=CDS;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11 NC_008149.1 RefSeq gene 2883526 2884605 . + . ID=gene2700;Name=YPN_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13510;old_locus_tag=YPN_2566 NC_008149.1 Protein Homology CDS 2883526 2884605 . + 0 ID=cds2629;Parent=gene2700;Dbxref=Genbank:WP_002354007.1;Name=WP_002354007.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;product=porin;protein_id=WP_002354007.1;transl_table=11 NC_008149.1 RefSeq gene 2884862 2886052 . + . ID=gene2701;Name=YPN_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13515;old_locus_tag=YPN_2567 NC_008149.1 Protein Homology CDS 2884862 2886052 . + 0 ID=cds2630;Parent=gene2701;Dbxref=Genbank:WP_002211303.1;Name=WP_002211303.1;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002211303.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2886106 2886277 . + . ID=id234;gbkey=repeat_region NC_008149.1 RefSeq gene 2886476 2887123 . - . ID=gene2702;Name=YPN_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13520;old_locus_tag=YPN_2568 NC_008149.1 Protein Homology CDS 2886476 2887123 . - 0 ID=cds2631;Parent=gene2702;Dbxref=Genbank:WP_002211304.1;Name=WP_002211304.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211304.1;transl_table=11 NC_008149.1 RefSeq gene 2887184 2887732 . - . ID=gene2703;Name=YPN_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13525;old_locus_tag=YPN_2569 NC_008149.1 Protein Homology CDS 2887184 2887732 . - 0 ID=cds2632;Parent=gene2703;Dbxref=Genbank:WP_002211305.1;Name=WP_002211305.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211305.1;transl_table=11 NC_008149.1 RefSeq gene 2887956 2889812 . - . ID=gene2704;Name=YPN_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13530;old_locus_tag=YPN_2570 NC_008149.1 Protein Homology CDS 2887956 2889812 . - 0 ID=cds2633;Parent=gene2704;Dbxref=Genbank:WP_002217987.1;Name=WP_002217987.1;gbkey=CDS;product=murein transpeptidase;protein_id=WP_002217987.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2889984 2890705 . + . ID=id235;gbkey=repeat_region NC_008149.1 RefSeq gene 2890096 2890554 . - . ID=gene2705;Name=YPN_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13535;old_locus_tag=YPN_2571 NC_008149.1 Protein Homology CDS 2890096 2890554 . - 0 ID=cds2634;Parent=gene2705;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 2890544 2890726 . - . ID=gene2706;Name=YPN_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13540 NC_008149.1 Protein Homology CDS 2890544 2890726 . - 0 ID=cds2635;Parent=gene2706;Dbxref=Genbank:WP_002217988.1;Name=WP_002217988.1;gbkey=CDS;product=invasin;protein_id=WP_002217988.1;transl_table=11 NC_008149.1 RefSeq gene 2890770 2895227 . - . ID=gene2707;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=YPN_RS13545;old_locus_tag=YPN_2572 NC_008149.1 Protein Homology CDS 2890770 2895227 . - 0 ID=cds2636;Parent=gene2707;Dbxref=Genbank:WP_002211308.1;Name=WP_002211308.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=chromosome partition protein MukB;protein_id=WP_002211308.1;transl_table=11 NC_008149.1 RefSeq gene 2895224 2895952 . - . ID=gene2708;Name=YPN_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13550;old_locus_tag=YPN_2573 NC_008149.1 Protein Homology CDS 2895224 2895952 . - 0 ID=cds2637;Parent=gene2708;Dbxref=Genbank:WP_002211309.1;Name=WP_002211309.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=condesin subunit E;protein_id=WP_002211309.1;transl_table=11 NC_008149.1 RefSeq gene 2895933 2897255 . - . ID=gene2709;Name=YPN_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13555;old_locus_tag=YPN_2574 NC_008149.1 Protein Homology CDS 2895933 2897255 . - 0 ID=cds2638;Parent=gene2709;Dbxref=Genbank:WP_002211310.1;Name=WP_002211310.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;product=chromosome partition protein MukF;protein_id=WP_002211310.1;transl_table=11 NC_008149.1 RefSeq gene 2897252 2898037 . - . ID=gene2710;Name=YPN_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13560;old_locus_tag=YPN_2575 NC_008149.1 Protein Homology CDS 2897252 2898037 . - 0 ID=cds2639;Parent=gene2710;Dbxref=Genbank:WP_002211311.1;Name=WP_002211311.1;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=WP_002211311.1;transl_table=11 NC_008149.1 RefSeq gene 2898282 2898434 . + . ID=gene2711;Name=YPN_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13565 NC_008149.1 Protein Homology CDS 2898282 2898434 . + 0 ID=cds2640;Parent=gene2711;Dbxref=Genbank:WP_002216252.1;Name=WP_002216252.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216252.1;transl_table=11 NC_008149.1 RefSeq gene 2898810 2899703 . - . ID=gene2712;Name=YPN_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13570;old_locus_tag=YPN_2576 NC_008149.1 Protein Homology CDS 2898810 2899703 . - 0 ID=cds2641;Parent=gene2712;Dbxref=Genbank:WP_002211313.1;Name=WP_002211313.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211313.1;transl_table=11 NC_008149.1 RefSeq gene 2900066 2900818 . - . ID=gene2713;Name=YPN_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13575;old_locus_tag=YPN_2577 NC_008149.1 Protein Homology CDS 2900066 2900818 . - 0 ID=cds2642;Parent=gene2713;Dbxref=Genbank:WP_002211314.1;Name=WP_002211314.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11 NC_008149.1 RefSeq gene 2900815 2900997 . - . ID=gene2714;Name=YPN_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13580;old_locus_tag=YPN_2578 NC_008149.1 Protein Homology CDS 2900815 2900997 . - 0 ID=cds2643;Parent=gene2714;Dbxref=Genbank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211315.1;transl_table=11 NC_008149.1 RefSeq gene 2901545 2901754 . - . ID=gene2715;Name=YPN_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13585;old_locus_tag=YPN_2579 NC_008149.1 Protein Homology CDS 2901545 2901754 . - 0 ID=cds2644;Parent=gene2715;Dbxref=Genbank:WP_002211317.1;Name=WP_002211317.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11 NC_008149.1 RefSeq gene 2901992 2902189 . + . ID=gene2716;Name=YPN_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13590 NC_008149.1 Protein Homology CDS 2901992 2902189 . + 0 ID=cds2645;Parent=gene2716;Dbxref=Genbank:WP_015683832.1;Name=WP_015683832.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683832.1;transl_table=11 NC_008149.1 RefSeq gene 2902473 2903900 . + . ID=gene2717;Name=YPN_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13595;old_locus_tag=YPN_2580 NC_008149.1 Protein Homology CDS 2902473 2903900 . + 0 ID=cds2646;Parent=gene2717;Dbxref=Genbank:WP_002226050.1;Name=WP_002226050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002226050.1;transl_table=11 NC_008149.1 RefSeq gene 2903908 2904894 . - . ID=gene2718;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=YPN_RS13600;old_locus_tag=YPN_2581 NC_008149.1 Protein Homology CDS 2903908 2904894 . - 0 ID=cds2647;Parent=gene2718;Dbxref=Genbank:WP_002211319.1;Name=WP_002211319.1;Note=transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_002211319.1;transl_table=11 NC_008149.1 RefSeq gene 2904891 2906639 . - . ID=gene2719;Name=YPN_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13605;old_locus_tag=YPN_2582 NC_008149.1 Protein Homology CDS 2904891 2906639 . - 0 ID=cds2648;Parent=gene2719;Dbxref=Genbank:WP_002211320.1;Name=WP_002211320.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;product=lipid A export ATP-binding/permease MsbA;protein_id=WP_002211320.1;transl_table=11 NC_008149.1 RefSeq gene 2906675 2908966 . - . ID=gene2720;Name=YPN_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13610;old_locus_tag=YPN_2583 NC_008149.1 Protein Homology CDS 2906675 2908966 . - 0 ID=cds2649;Parent=gene2720;Dbxref=Genbank:WP_002228586.1;Name=WP_002228586.1;gbkey=CDS;product=competence protein ComEC;protein_id=WP_002228586.1;transl_table=11 NC_008149.1 RefSeq gene 2909513 2909797 . - . ID=gene2721;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=YPN_RS13615;old_locus_tag=YPN_2584 NC_008149.1 Protein Homology CDS 2909513 2909797 . - 0 ID=cds2650;Parent=gene2721;Dbxref=Genbank:WP_002211322.1;Name=WP_002211322.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11 NC_008149.1 RefSeq gene 2909858 2911531 . - . ID=gene2722;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=YPN_RS13620;old_locus_tag=YPN_2585 NC_008149.1 Protein Homology CDS 2909858 2911531 . - 0 ID=cds2651;Parent=gene2722;Dbxref=Genbank:WP_002211323.1;Name=WP_002211323.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_002211323.1;transl_table=11 NC_008149.1 RefSeq gene 2911705 2912397 . - . ID=gene2723;Name=YPN_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13625;old_locus_tag=YPN_2586 NC_008149.1 Protein Homology CDS 2911705 2912397 . - 0 ID=cds2652;Parent=gene2723;Dbxref=Genbank:WP_002211324.1;Name=WP_002211324.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_002211324.1;transl_table=11 NC_008149.1 RefSeq gene 2912710 2913996 . - . ID=gene2724;Name=YPN_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13630;old_locus_tag=YPN_2587 NC_008149.1 Protein Homology CDS 2912710 2913996 . - 0 ID=cds2653;Parent=gene2724;Dbxref=Genbank:WP_002211325.1;Name=WP_002211325.1;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_002211325.1;transl_table=11 NC_008149.1 RefSeq gene 2914159 2915244 . - . ID=gene2725;Name=YPN_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13635;old_locus_tag=YPN_2588 NC_008149.1 Protein Homology CDS 2914159 2915244 . - 0 ID=cds2654;Parent=gene2725;Dbxref=Genbank:WP_002211326.1;Name=WP_002211326.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=WP_002211326.1;transl_table=11 NC_008149.1 RefSeq gene 2915611 2917458 . - . ID=gene2726;Name=YPN_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13640;old_locus_tag=YPN_2589 NC_008149.1 Protein Homology CDS 2915611 2917458 . - 0 ID=cds2655;Parent=gene2726;Dbxref=Genbank:WP_002211327.1;Name=WP_002211327.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211327.1;transl_table=11 NC_008149.1 RefSeq gene 2917479 2918573 . - . ID=gene2727;Name=YPN_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13645;old_locus_tag=YPN_2590 NC_008149.1 Protein Homology CDS 2917479 2918573 . - 0 ID=cds2656;Parent=gene2727;Dbxref=Genbank:WP_002211328.1;Name=WP_002211328.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002211328.1;transl_table=11 NC_008149.1 RefSeq gene 2918842 2919879 . - . ID=gene2728;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=YPN_RS13650;old_locus_tag=YPN_2591 NC_008149.1 Protein Homology CDS 2918842 2919879 . - 0 ID=cds2657;Parent=gene2728;Dbxref=Genbank:WP_002211329.1;Name=WP_002211329.1;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis;gbkey=CDS;gene=ansB;product=L-asparaginase;protein_id=WP_002211329.1;transl_table=11 NC_008149.1 RefSeq gene 2920028 2921794 . + . ID=gene2729;Name=YPN_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13655;old_locus_tag=YPN_2592 NC_008149.1 Protein Homology CDS 2920028 2921794 . + 0 ID=cds2658;Parent=gene2729;Dbxref=Genbank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211330.1;transl_table=11 NC_008149.1 RefSeq gene 2922491 2923348 . + . ID=gene2730;Name=YPN_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13660;old_locus_tag=YPN_2593 NC_008149.1 Protein Homology CDS 2922491 2923348 . + 0 ID=cds2659;Parent=gene2730;Dbxref=Genbank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11 NC_008149.1 RefSeq gene 2923404 2925686 . + . ID=gene2731;Name=YPN_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13665;old_locus_tag=YPN_2594 NC_008149.1 Protein Homology CDS 2923404 2925686 . + 0 ID=cds2660;Parent=gene2731;Dbxref=Genbank:WP_002211332.1;Name=WP_002211332.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;product=keto-acid formate acetyltransferase;protein_id=WP_002211332.1;transl_table=11 NC_008149.1 RefSeq gene 2925804 2926478 . - . ID=gene2732;Name=YPN_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13670;old_locus_tag=YPN_2595 NC_008149.1 Protein Homology CDS 2925804 2926478 . - 0 ID=cds2661;Parent=gene2732;Dbxref=Genbank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;product=LPS glycosyltransferase;protein_id=WP_002211333.1;transl_table=11 NC_008149.1 RefSeq gene 2927465 2928199 . + . ID=gene2733;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=YPN_RS13675;old_locus_tag=YPN_2596 NC_008149.1 Protein Homology CDS 2927465 2928199 . + 0 ID=cds2662;Parent=gene2733;Dbxref=Genbank:WP_002211334.1;Name=WP_002211334.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating protein;protein_id=WP_002211334.1;transl_table=11 NC_008149.1 RefSeq gene 2928353 2928961 . - . ID=gene2734;Name=YPN_RS13680;end_range=2928961,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS13680;old_locus_tag=YPN_2597;partial=true;pseudo=true NC_008149.1 Protein Homology CDS 2928353 2928961 . - 0 ID=cds2663;Parent=gene2734;end_range=2928961,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NC_008149.1 RefSeq repeat_region 2928956 2930913 . + . ID=id236;gbkey=repeat_region NC_008149.1 RefSeq gene 2929045 2930067 . + . ID=gene2735;Name=YPN_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13685;old_locus_tag=YPN_2598 NC_008149.1 Protein Homology CDS 2929045 2930067 . + 0 ID=cds2664;Parent=gene2735;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 2930067 2930846 . + . ID=gene2736;Name=YPN_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13690;old_locus_tag=YPN_2599 NC_008149.1 Protein Homology CDS 2930067 2930846 . + 0 ID=cds2665;Parent=gene2736;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 2930897 2931460 . - . ID=gene2737;Name=YPN_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13695;old_locus_tag=YPN_2600 NC_008149.1 Protein Homology CDS 2930897 2931460 . - 0 ID=cds2666;Parent=gene2737;Dbxref=Genbank:WP_002223476.1;Name=WP_002223476.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002223476.1;transl_table=11 NC_008149.1 RefSeq gene 2931731 2933023 . - . ID=gene2738;Name=YPN_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13700;old_locus_tag=YPN_2601 NC_008149.1 Protein Homology CDS 2931731 2933023 . - 0 ID=cds2667;Parent=gene2738;Dbxref=Genbank:WP_002211336.1;Name=WP_002211336.1;gbkey=CDS;product=serine--tRNA ligase;protein_id=WP_002211336.1;transl_table=11 NC_008149.1 RefSeq gene 2933265 2934608 . - . ID=gene2739;Name=YPN_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13705;old_locus_tag=YPN_2602 NC_008149.1 Protein Homology CDS 2933265 2934608 . - 0 ID=cds2668;Parent=gene2739;Dbxref=Genbank:WP_002228009.1;Name=WP_002228009.1;gbkey=CDS;product=recombinase RarA;protein_id=WP_002228009.1;transl_table=11 NC_008149.1 RefSeq gene 2934619 2935227 . - . ID=gene2740;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=YPN_RS13710;old_locus_tag=YPN_2603 NC_008149.1 Protein Homology CDS 2934619 2935227 . - 0 ID=cds2669;Parent=gene2740;Dbxref=Genbank:WP_002211338.1;Name=WP_002211338.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_002211338.1;transl_table=11 NC_008149.1 RefSeq gene 2935420 2939337 . - . ID=gene2741;Name=YPN_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13715;old_locus_tag=YPN_2604 NC_008149.1 Protein Homology CDS 2935420 2939337 . - 0 ID=cds2670;Parent=gene2741;Dbxref=Genbank:WP_002211339.1;Name=WP_002211339.1;gbkey=CDS;product=cell division protein FtsK;protein_id=WP_002211339.1;transl_table=11 NC_008149.1 RefSeq gene 2939460 2939954 . - . ID=gene2742;Name=YPN_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13720;old_locus_tag=YPN_2605 NC_008149.1 Protein Homology CDS 2939460 2939954 . - 0 ID=cds2671;Parent=gene2742;Dbxref=Genbank:WP_002211340.1;Name=WP_002211340.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;product=AsnC family transcriptional regulator;protein_id=WP_002211340.1;transl_table=11 NC_008149.1 RefSeq gene 2940721 2941683 . + . ID=gene2743;Name=YPN_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13725;old_locus_tag=YPN_2606 NC_008149.1 Protein Homology CDS 2940721 2941683 . + 0 ID=cds2672;Parent=gene2743;Dbxref=Genbank:WP_002211341.1;Name=WP_002211341.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_002211341.1;transl_table=11 NC_008149.1 RefSeq gene 2941788 2941925 . - . ID=gene2744;Name=YPN_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13730 NC_008149.1 Protein Homology CDS 2941788 2941925 . - 0 ID=cds2673;Parent=gene2744;Dbxref=Genbank:WP_002211342.1;Name=WP_002211342.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211342.1;transl_table=11 NC_008149.1 RefSeq gene 2942142 2943908 . + . ID=gene2745;Name=YPN_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13735;old_locus_tag=YPN_2607 NC_008149.1 Protein Homology CDS 2942142 2943908 . + 0 ID=cds2674;Parent=gene2745;Dbxref=Genbank:WP_002217690.1;Name=WP_002217690.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002217690.1;transl_table=11 NC_008149.1 RefSeq gene 2943911 2945635 . + . ID=gene2746;Name=YPN_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13740;old_locus_tag=YPN_2608 NC_008149.1 Protein Homology CDS 2943911 2945635 . + 0 ID=cds2675;Parent=gene2746;Dbxref=Genbank:WP_002211344.1;Name=WP_002211344.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=WP_002211344.1;transl_table=11 NC_008149.1 RefSeq gene 2945854 2946564 . + . ID=gene2747;Name=YPN_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13745;old_locus_tag=YPN_2609 NC_008149.1 Protein Homology CDS 2945854 2946564 . + 0 ID=cds2676;Parent=gene2747;Dbxref=Genbank:WP_002211346.1;Name=WP_002211346.1;gbkey=CDS;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_002211346.1;transl_table=11 NC_008149.1 RefSeq gene 2946730 2946948 . + . ID=gene2748;Name=YPN_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13750;old_locus_tag=YPN_2610 NC_008149.1 Protein Homology CDS 2946730 2946948 . + 0 ID=cds2677;Parent=gene2748;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NC_008149.1 RefSeq repeat_region 2947209 2947931 . + . ID=id237;gbkey=repeat_region NC_008149.1 RefSeq gene 2947320 2947778 . - . ID=gene2749;Name=YPN_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13755;old_locus_tag=YPN_2611 NC_008149.1 Protein Homology CDS 2947320 2947778 . - 0 ID=cds2678;Parent=gene2749;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 2948071 2950347 . - . ID=gene2750;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=YPN_RS13760;old_locus_tag=YPN_2612 NC_008149.1 Protein Homology CDS 2948071 2950347 . - 0 ID=cds2679;Parent=gene2750;Dbxref=Genbank:WP_002211348.1;Name=WP_002211348.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_002211348.1;transl_table=11 NC_008149.1 RefSeq gene 2950373 2950693 . - . ID=gene2751;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=YPN_RS13765;old_locus_tag=YPN_2613 NC_008149.1 Protein Homology CDS 2950373 2950693 . - 0 ID=cds2680;Parent=gene2751;Dbxref=Genbank:WP_002211349.1;Name=WP_002211349.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=WP_002211349.1;transl_table=11 NC_008149.1 RefSeq gene 2951054 2951317 . + . ID=gene2752;Name=YPN_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13770;old_locus_tag=YPN_2614 NC_008149.1 Protein Homology CDS 2951054 2951317 . + 0 ID=cds2681;Parent=gene2752;Dbxref=Genbank:WP_002211350.1;Name=WP_002211350.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;product=cold-shock protein;protein_id=WP_002211350.1;transl_table=11 NC_008149.1 RefSeq gene 2951598 2953547 . - . ID=gene2753;Name=YPN_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13775;old_locus_tag=YPN_2615 NC_008149.1 Protein Homology CDS 2951598 2953547 . - 0 ID=cds2682;Parent=gene2753;Dbxref=Genbank:WP_002211351.1;Name=WP_002211351.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;product=MacB family efflux pump subunit;protein_id=WP_002211351.1;transl_table=11 NC_008149.1 RefSeq gene 2953547 2954659 . - . ID=gene2754;Name=YPN_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13780;old_locus_tag=YPN_2616 NC_008149.1 Protein Homology CDS 2953547 2954659 . - 0 ID=cds2683;Parent=gene2754;Dbxref=Genbank:WP_002216705.1;Name=WP_002216705.1;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=WP_002216705.1;transl_table=11 NC_008149.1 RefSeq gene 2954896 2955843 . + . ID=gene2755;Name=YPN_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13785;old_locus_tag=YPN_2618 NC_008149.1 Protein Homology CDS 2954896 2955843 . + 0 ID=cds2684;Parent=gene2755;Dbxref=Genbank:WP_002211355.1;Name=WP_002211355.1;gbkey=CDS;product=virulence factor;protein_id=WP_002211355.1;transl_table=11 NC_008149.1 RefSeq gene 2955980 2957647 . - . ID=gene2756;Name=YPN_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13790;old_locus_tag=YPN_2619 NC_008149.1 Protein Homology CDS 2955980 2957647 . - 0 ID=cds2685;Parent=gene2756;Dbxref=Genbank:WP_002211356.1;Name=WP_002211356.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211356.1;transl_table=11 NC_008149.1 RefSeq gene 2958000 2958896 . + . ID=gene2757;Name=YPN_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13795;old_locus_tag=YPN_2620 NC_008149.1 Protein Homology CDS 2958000 2958896 . + 0 ID=cds2686;Parent=gene2757;Dbxref=Genbank:WP_002211358.1;Name=WP_002211358.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211358.1;transl_table=11 NC_008149.1 RefSeq gene 2959098 2960750 . + . ID=gene2758;Name=YPN_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13800;old_locus_tag=YPN_2621 NC_008149.1 Protein Homology CDS 2959098 2960750 . + 0 ID=cds2687;Parent=gene2758;Dbxref=Genbank:WP_002211359.1;Name=WP_002211359.1;gbkey=CDS;product=hydroxylamine reductase;protein_id=WP_002211359.1;transl_table=11 NC_008149.1 RefSeq gene 2960864 2961886 . + . ID=gene2759;Name=YPN_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13805;old_locus_tag=YPN_2622 NC_008149.1 Protein Homology CDS 2960864 2961886 . + 0 ID=cds2688;Parent=gene2759;Dbxref=Genbank:WP_002211360.1;Name=WP_002211360.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002211360.1;transl_table=11 NC_008149.1 RefSeq gene 2962030 2963751 . + . ID=gene2760;Name=YPN_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13810;old_locus_tag=YPN_2623 NC_008149.1 Protein Homology CDS 2962030 2963751 . + 0 ID=cds2689;Parent=gene2760;Dbxref=Genbank:WP_002211361.1;Name=WP_002211361.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=WP_002211361.1;transl_table=11 NC_008149.1 RefSeq gene 2964100 2965119 . + . ID=gene2761;Name=YPN_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13815;old_locus_tag=YPN_2625 NC_008149.1 Protein Homology CDS 2964100 2965119 . + 0 ID=cds2690;Parent=gene2761;Dbxref=Genbank:WP_002211362.1;Name=WP_002211362.1;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;gbkey=CDS;product=threonine aldolase;protein_id=WP_002211362.1;transl_table=11 NC_008149.1 RefSeq gene 2965116 2966606 . + . ID=gene2762;Name=YPN_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13820;old_locus_tag=YPN_2626 NC_008149.1 Protein Homology CDS 2965116 2966606 . + 0 ID=cds2691;Parent=gene2762;Dbxref=Genbank:WP_002211363.1;Name=WP_002211363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211363.1;transl_table=11 NC_008149.1 RefSeq gene 2966706 2967713 . + . ID=gene2763;Name=YPN_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13825;old_locus_tag=YPN_2627 NC_008149.1 Protein Homology CDS 2966706 2967713 . + 0 ID=cds2692;Parent=gene2763;Dbxref=Genbank:WP_002211364.1;Name=WP_002211364.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211364.1;transl_table=11 NC_008149.1 RefSeq gene 2967810 2968385 . + . ID=gene2764;Name=YPN_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13830;old_locus_tag=YPN_2628 NC_008149.1 Protein Homology CDS 2967810 2968385 . + 0 ID=cds2693;Parent=gene2764;Dbxref=Genbank:WP_002211365.1;Name=WP_002211365.1;Note=induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS;gbkey=CDS;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11 NC_008149.1 RefSeq gene 2968555 2969115 . + . ID=gene2765;Name=YPN_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13835;old_locus_tag=YPN_2630 NC_008149.1 Protein Homology CDS 2968555 2969115 . + 0 ID=cds2694;Parent=gene2765;Dbxref=Genbank:WP_002211366.1;Name=WP_002211366.1;Note=catalyzes the interconversion of chorismate to prephenate;gbkey=CDS;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11 NC_008149.1 RefSeq gene 2969410 2970138 . + . ID=gene2766;Name=YPN_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13840;old_locus_tag=YPN_2631 NC_008149.1 Protein Homology CDS 2969410 2970138 . + 0 ID=cds2695;Parent=gene2766;Dbxref=Genbank:WP_002228008.1;Name=WP_002228008.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_002228008.1;transl_table=11 NC_008149.1 RefSeq gene 2970159 2970890 . + . ID=gene2767;Name=YPN_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13845;old_locus_tag=YPN_2632 NC_008149.1 Protein Homology CDS 2970159 2970890 . + 0 ID=cds2696;Parent=gene2767;Dbxref=Genbank:WP_002211368.1;Name=WP_002211368.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002211368.1;transl_table=11 NC_008149.1 RefSeq gene 2970902 2971617 . + . ID=gene2768;Name=YPN_RS13850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS13850;pseudo=true NC_008149.1 Protein Homology CDS 2970902 2971617 . + 0 ID=cds2697;Parent=gene2768;Note=with ArtPMJI transports arginine across the inner membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;product=arginine transporter permease subunit ArtQ;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2971617 2972285 . + . ID=gene2769;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=YPN_RS13855;old_locus_tag=YPN_2635 NC_008149.1 Protein Homology CDS 2971617 2972285 . + 0 ID=cds2698;Parent=gene2769;Dbxref=Genbank:WP_002211370.1;Name=WP_002211370.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;protein_id=WP_002211370.1;transl_table=11 NC_008149.1 RefSeq gene 2972475 2973320 . - . ID=gene2770;Name=YPN_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13865;old_locus_tag=YPN_2636 NC_008149.1 Protein Homology CDS 2972475 2973320 . - 0 ID=cds2699;Parent=gene2770;Dbxref=Genbank:WP_002223483.1;Name=WP_002223483.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223483.1;transl_table=11 NC_008149.1 RefSeq gene 2973317 2974687 . - . ID=gene2771;Name=YPN_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13870;old_locus_tag=YPN_2637 NC_008149.1 Protein Homology CDS 2973317 2974687 . - 0 ID=cds2700;Parent=gene2771;Dbxref=Genbank:WP_002211373.1;Name=WP_002211373.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211373.1;transl_table=11 NC_008149.1 RefSeq gene 2974680 2975477 . - . ID=gene2772;Name=YPN_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13875;old_locus_tag=YPN_2638 NC_008149.1 Protein Homology CDS 2974680 2975477 . - 0 ID=cds2701;Parent=gene2772;Dbxref=Genbank:WP_002211374.1;Name=WP_002211374.1;gbkey=CDS;product=nicotianamine synthase;protein_id=WP_002211374.1;transl_table=11 NC_008149.1 RefSeq gene 2975465 2976250 . - . ID=gene2773;Name=YPN_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13880;old_locus_tag=YPN_2639 NC_008149.1 Protein Homology CDS 2975465 2976250 . - 0 ID=cds2702;Parent=gene2773;Dbxref=Genbank:WP_002211375.1;Name=WP_002211375.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002211375.1;transl_table=11 NC_008149.1 RefSeq gene 2976247 2977303 . - . ID=gene2774;Name=YPN_RS13885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS13885;old_locus_tag=YPN_2640;pseudo=true NC_008149.1 Protein Homology CDS 2976247 2977303 . - 0 ID=cds2703;Parent=gene2774;exception=annotated by transcript or proteomic data;gbkey=CDS;product=iron-siderophore ABC transporter permease;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 2977303 2978394 . - . ID=gene2775;Name=YPN_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13890;old_locus_tag=YPN_2641 NC_008149.1 Protein Homology CDS 2977303 2978394 . - 0 ID=cds2704;Parent=gene2775;Dbxref=Genbank:WP_002211377.1;Name=WP_002211377.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002211377.1;transl_table=11 NC_008149.1 RefSeq gene 2978806 2979732 . - . ID=gene2776;Name=YPN_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13895;old_locus_tag=YPN_2642 NC_008149.1 Protein Homology CDS 2978806 2979732 . - 0 ID=cds2705;Parent=gene2776;Dbxref=Genbank:WP_002211378.1;Name=WP_002211378.1;gbkey=CDS;product=SPFH/band 7 family protein;protein_id=WP_002211378.1;transl_table=11 NC_008149.1 RefSeq gene 2980073 2980303 . - . ID=gene2777;Name=YPN_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13900 NC_008149.1 Protein Homology CDS 2980073 2980303 . - 0 ID=cds2706;Parent=gene2777;Dbxref=Genbank:WP_002228004.1;Name=WP_002228004.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228004.1;transl_table=11 NC_008149.1 RefSeq gene 2980315 2980431 . - . ID=gene2778;Name=YPN_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13905 NC_008149.1 Protein Homology CDS 2980315 2980431 . - 0 ID=cds2707;Parent=gene2778;Dbxref=Genbank:WP_002211379.1;Name=WP_002211379.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211379.1;transl_table=11 NC_008149.1 RefSeq gene 2980551 2981282 . + . ID=gene2779;Name=YPN_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13910;old_locus_tag=YPN_2643 NC_008149.1 Protein Homology CDS 2980551 2981282 . + 0 ID=cds2708;Parent=gene2779;Dbxref=Genbank:WP_002220045.1;Name=WP_002220045.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002220045.1;transl_table=11 NC_008149.1 RefSeq gene 2981409 2982539 . - . ID=gene2780;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=YPN_RS13915;old_locus_tag=YPN_2644 NC_008149.1 Protein Homology CDS 2981409 2982539 . - 0 ID=cds2709;Parent=gene2780;Dbxref=Genbank:WP_002208756.1;Name=WP_002208756.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_002208756.1;transl_table=11 NC_008149.1 RefSeq gene 2982623 2983087 . - . ID=gene2781;Name=YPN_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13920;old_locus_tag=YPN_2645 NC_008149.1 Protein Homology CDS 2982623 2983087 . - 0 ID=cds2710;Parent=gene2781;Dbxref=Genbank:WP_002208757.1;Name=WP_002208757.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208757.1;transl_table=11 NC_008149.1 RefSeq gene 2983212 2984057 . - . ID=gene2782;Name=YPN_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13925;old_locus_tag=YPN_2646 NC_008149.1 Protein Homology CDS 2983212 2984057 . - 0 ID=cds2711;Parent=gene2782;Dbxref=Genbank:WP_002208758.1;Name=WP_002208758.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208758.1;transl_table=11 NC_008149.1 RefSeq gene 2984054 2985019 . - . ID=gene2783;Name=YPN_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13930;old_locus_tag=YPN_2647 NC_008149.1 Protein Homology CDS 2984054 2985019 . - 0 ID=cds2712;Parent=gene2783;Dbxref=Genbank:WP_002208759.1;Name=WP_002208759.1;gbkey=CDS;product=putrescine/spermidine ABC transporter permease;protein_id=WP_002208759.1;transl_table=11 NC_008149.1 RefSeq gene 2985044 2986177 . - . ID=gene2784;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=YPN_RS13935;old_locus_tag=YPN_2648 NC_008149.1 Protein Homology CDS 2985044 2986177 . - 0 ID=cds2713;Parent=gene2784;Dbxref=Genbank:WP_002208760.1;Name=WP_002208760.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=WP_002208760.1;transl_table=11 NC_008149.1 RefSeq gene 2986348 2987457 . - . ID=gene2785;Name=YPN_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13940;old_locus_tag=YPN_2649 NC_008149.1 Protein Homology CDS 2986348 2987457 . - 0 ID=cds2714;Parent=gene2785;Dbxref=Genbank:WP_002208762.1;Name=WP_002208762.1;gbkey=CDS;product=putrescine ABC transporter substrate-binding protein;protein_id=WP_002208762.1;transl_table=11 NC_008149.1 RefSeq gene 2987975 2988460 . - . ID=gene2786;Name=YPN_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13945;old_locus_tag=YPN_2650 NC_008149.1 Protein Homology CDS 2987975 2988460 . - 0 ID=cds2715;Parent=gene2786;Dbxref=Genbank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208763.1;transl_table=11 NC_008149.1 RefSeq gene 2988467 2988586 . - . ID=gene2787;Name=YPN_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13950 NC_008149.1 Protein Homology CDS 2988467 2988586 . - 0 ID=cds2716;Parent=gene2787;Dbxref=Genbank:WP_002216035.1;Name=WP_002216035.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216035.1;transl_table=11 NC_008149.1 RefSeq gene 2988602 2988916 . - . ID=gene2788;Name=YPN_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13955;old_locus_tag=YPN_2651 NC_008149.1 Protein Homology CDS 2988602 2988916 . - 0 ID=cds2717;Parent=gene2788;Dbxref=Genbank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;product=membrane protein;protein_id=WP_002216036.1;transl_table=11 NC_008149.1 RefSeq gene 2989379 2989642 . + . ID=gene2789;Name=YPN_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13960;old_locus_tag=YPN_2652 NC_008149.1 Protein Homology CDS 2989379 2989642 . + 0 ID=cds2718;Parent=gene2789;Dbxref=Genbank:WP_002208765.1;Name=WP_002208765.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208765.1;transl_table=11 NC_008149.1 RefSeq gene 2990052 2991740 . + . ID=gene2790;Name=YPN_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13965;old_locus_tag=YPN_2653 NC_008149.1 Protein Homology CDS 2990052 2991740 . + 0 ID=cds2719;Parent=gene2790;Dbxref=Genbank:WP_002208766.1;Name=WP_002208766.1;gbkey=CDS;product=transporter;protein_id=WP_002208766.1;transl_table=11 NC_008149.1 RefSeq gene 2992217 2992888 . + . ID=gene2791;Name=YPN_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13970;old_locus_tag=YPN_2654 NC_008149.1 Protein Homology CDS 2992217 2992888 . + 0 ID=cds2720;Parent=gene2791;Dbxref=Genbank:WP_002208767.1;Name=WP_002208767.1;gbkey=CDS;product=phosphoesterase;protein_id=WP_002208767.1;transl_table=11 NC_008149.1 RefSeq gene 2992888 2993493 . + . ID=gene2792;Name=YPN_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13975;old_locus_tag=YPN_2655 NC_008149.1 Protein Homology CDS 2992888 2993493 . + 0 ID=cds2721;Parent=gene2792;Dbxref=Genbank:WP_002208768.1;Name=WP_002208768.1;gbkey=CDS;product=UDP-diphosphatase;protein_id=WP_002208768.1;transl_table=11 NC_008149.1 RefSeq gene 2993751 2994422 . + . ID=gene2793;Name=YPN_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13980;old_locus_tag=YPN_2656 NC_008149.1 Protein Homology CDS 2993751 2994422 . + 0 ID=cds2722;Parent=gene2793;Dbxref=Genbank:WP_002208769.1;Name=WP_002208769.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002208769.1;transl_table=11 NC_008149.1 RefSeq gene 2994652 2995416 . + . ID=gene2794;Name=YPN_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13985;old_locus_tag=YPN_2657 NC_008149.1 Protein Homology CDS 2994652 2995416 . + 0 ID=cds2723;Parent=gene2794;Dbxref=Genbank:WP_002208770.1;Name=WP_002208770.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208770.1;transl_table=11 NC_008149.1 RefSeq gene 2996515 2997816 . + . ID=gene2795;Name=YPN_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13990;old_locus_tag=YPN_2658 NC_008149.1 Protein Homology CDS 2996515 2997816 . + 0 ID=cds2724;Parent=gene2795;Dbxref=Genbank:WP_002215443.1;Name=WP_002215443.1;gbkey=CDS;product=serine transporter;protein_id=WP_002215443.1;transl_table=11 NC_008149.1 RefSeq gene 2997813 2997965 . - . ID=gene2796;Name=YPN_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS13995 NC_008149.1 Protein Homology CDS 2997813 2997965 . - 0 ID=cds2725;Parent=gene2796;Dbxref=Genbank:WP_002215444.1;Name=WP_002215444.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215444.1;transl_table=11 NC_008149.1 RefSeq gene 2998256 2999461 . - . ID=gene2797;Name=YPN_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14000;old_locus_tag=YPN_2659 NC_008149.1 Protein Homology CDS 2998256 2999461 . - 0 ID=cds2726;Parent=gene2797;Dbxref=Genbank:WP_002208774.1;Name=WP_002208774.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002208774.1;transl_table=11 NC_008149.1 RefSeq gene 2999796 3000467 . - . ID=gene2798;Name=YPN_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14005;old_locus_tag=YPN_2660 NC_008149.1 Protein Homology CDS 2999796 3000467 . - 0 ID=cds2727;Parent=gene2798;Dbxref=Genbank:WP_002208775.1;Name=WP_002208775.1;gbkey=CDS;product=metal ABC transporter permease;protein_id=WP_002208775.1;transl_table=11 NC_008149.1 RefSeq gene 3000464 3001450 . - . ID=gene2799;Name=YPN_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14010;old_locus_tag=YPN_2661 NC_008149.1 Protein Homology CDS 3000464 3001450 . - 0 ID=cds2728;Parent=gene2799;Dbxref=Genbank:WP_002208776.1;Name=WP_002208776.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11 NC_008149.1 RefSeq gene 3001447 3002271 . - . ID=gene2800;Name=YPN_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14015;old_locus_tag=YPN_2662 NC_008149.1 Protein Homology CDS 3001447 3002271 . - 0 ID=cds2729;Parent=gene2800;Dbxref=Genbank:WP_002208777.1;Name=WP_002208777.1;gbkey=CDS;product=metal ABC transporter substrate-binding protein;protein_id=WP_002208777.1;transl_table=11 NC_008149.1 RefSeq gene 3002499 3003566 . - . ID=gene2801;Name=YPN_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14020;old_locus_tag=YPN_2663 NC_008149.1 Protein Homology CDS 3002499 3003566 . - 0 ID=cds2730;Parent=gene2801;Dbxref=Genbank:WP_002208778.1;Name=WP_002208778.1;gbkey=CDS;product=2-oxobutyrate oxidase;protein_id=WP_002208778.1;transl_table=11 NC_008149.1 RefSeq gene 3004053 3004703 . + . ID=gene2802;Name=YPN_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14025;old_locus_tag=YPN_2664 NC_008149.1 Protein Homology CDS 3004053 3004703 . + 0 ID=cds2731;Parent=gene2802;Dbxref=Genbank:WP_002215448.1;Name=WP_002215448.1;gbkey=CDS;product=hydrolase;protein_id=WP_002215448.1;transl_table=11 NC_008149.1 RefSeq gene 3004857 3005477 . + . ID=gene2803;Name=YPN_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14030;old_locus_tag=YPN_2665 NC_008149.1 Protein Homology CDS 3004857 3005477 . + 0 ID=cds2732;Parent=gene2803;Dbxref=Genbank:WP_002208781.1;Name=WP_002208781.1;gbkey=CDS;product=glutathione S-transferase;protein_id=WP_002208781.1;transl_table=11 NC_008149.1 RefSeq gene 3005747 3007744 . - . ID=gene2804;Name=YPN_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14035;old_locus_tag=YPN_2666 NC_008149.1 Protein Homology CDS 3005747 3007744 . - 0 ID=cds2733;Parent=gene2804;Dbxref=Genbank:WP_002208782.1;Name=WP_002208782.1;Note=YiuR%3B outer membrane siderophore receptor;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11 NC_008149.1 RefSeq gene 3008004 3008792 . - . ID=gene2805;Name=YPN_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14040;old_locus_tag=YPN_2667 NC_008149.1 Protein Homology CDS 3008004 3008792 . - 0 ID=cds2734;Parent=gene2805;Dbxref=Genbank:WP_002208783.1;Name=WP_002208783.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002208783.1;transl_table=11 NC_008149.1 RefSeq gene 3008789 3009871 . - . ID=gene2806;Name=YPN_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14045;old_locus_tag=YPN_2668 NC_008149.1 Protein Homology CDS 3008789 3009871 . - 0 ID=cds2735;Parent=gene2806;Dbxref=Genbank:WP_002215451.1;Name=WP_002215451.1;gbkey=CDS;product=iron-siderophore ABC transporter permease;protein_id=WP_002215451.1;transl_table=11 NC_008149.1 RefSeq gene 3010066 3011211 . - . ID=gene2807;Name=YPN_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14050;old_locus_tag=YPN_2669 NC_008149.1 Protein Homology CDS 3010066 3011211 . - 0 ID=cds2736;Parent=gene2807;Dbxref=Genbank:WP_002208785.1;Name=WP_002208785.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002208785.1;transl_table=11 NC_008149.1 RefSeq gene 3011497 3013008 . - . ID=gene2808;Name=YPN_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14055;old_locus_tag=YPN_2670 NC_008149.1 Protein Homology CDS 3011497 3013008 . - 0 ID=cds2737;Parent=gene2808;Dbxref=Genbank:WP_002208786.1;Name=WP_002208786.1;gbkey=CDS;product=lysine transporter;protein_id=WP_002208786.1;transl_table=11 NC_008149.1 RefSeq gene 3013266 3014138 . - . ID=gene2809;Name=YPN_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14060;old_locus_tag=YPN_2671 NC_008149.1 Protein Homology CDS 3013266 3014138 . - 0 ID=cds2738;Parent=gene2809;Dbxref=Genbank:WP_002208788.1;Name=WP_002208788.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208788.1;transl_table=11 NC_008149.1 RefSeq gene 3014796 3015884 . + . ID=gene2810;Name=YPN_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14065;old_locus_tag=YPN_2672 NC_008149.1 Protein Homology CDS 3014796 3015884 . + 0 ID=cds2739;Parent=gene2810;Dbxref=Genbank:WP_002208790.1;Name=WP_002208790.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208790.1;transl_table=11 NC_008149.1 RefSeq gene 3016048 3016905 . + . ID=gene2811;Name=YPN_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14070;old_locus_tag=YPN_2673 NC_008149.1 Protein Homology CDS 3016048 3016905 . + 0 ID=cds2740;Parent=gene2811;Dbxref=Genbank:WP_002208791.1;Name=WP_002208791.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease;protein_id=WP_002208791.1;transl_table=11 NC_008149.1 RefSeq gene 3016992 3019463 . - . ID=gene2812;Name=YPN_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14075;old_locus_tag=YPN_2674 NC_008149.1 Protein Homology CDS 3016992 3019463 . - 0 ID=cds2741;Parent=gene2812;Dbxref=Genbank:WP_002208792.1;Name=WP_002208792.1;gbkey=CDS;product=usher protein;protein_id=WP_002208792.1;transl_table=11 NC_008149.1 RefSeq gene 3019547 3020368 . - . ID=gene2813;Name=YPN_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14080;old_locus_tag=YPN_2675 NC_008149.1 Protein Homology CDS 3019547 3020368 . - 0 ID=cds2742;Parent=gene2813;Dbxref=Genbank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11 NC_008149.1 RefSeq gene 3020495 3020971 . - . ID=gene2814;Name=YPN_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14085;old_locus_tag=YPN_2676 NC_008149.1 Protein Homology CDS 3020495 3020971 . - 0 ID=cds2743;Parent=gene2814;Dbxref=Genbank:WP_002208794.1;Name=WP_002208794.1;gbkey=CDS;product=pH 6 antigen;protein_id=WP_002208794.1;transl_table=11 NC_008149.1 RefSeq gene 3021516 3022004 . - . ID=gene2815;Name=YPN_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14090;old_locus_tag=YPN_2677 NC_008149.1 Protein Homology CDS 3021516 3022004 . - 0 ID=cds2744;Parent=gene2815;Dbxref=Genbank:WP_002216523.1;Name=WP_002216523.1;gbkey=CDS;product=protein PsaF;protein_id=WP_002216523.1;transl_table=11 NC_008149.1 RefSeq gene 3022001 3022645 . - . ID=gene2816;Name=YPN_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14095;old_locus_tag=YPN_2678 NC_008149.1 Protein Homology CDS 3022001 3022645 . - 0 ID=cds2745;Parent=gene2816;Dbxref=Genbank:WP_002208796.1;Name=WP_002208796.1;gbkey=CDS;product=protein PsaE;protein_id=WP_002208796.1;transl_table=11 NC_008149.1 RefSeq gene 3022970 3024670 . - . ID=gene2817;Name=YPN_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14100;old_locus_tag=YPN_2679 NC_008149.1 Protein Homology CDS 3022970 3024670 . - 0 ID=cds2746;Parent=gene2817;Dbxref=Genbank:WP_002208797.1;Name=WP_002208797.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS fructose transporter subunit IIBC;protein_id=WP_002208797.1;transl_table=11 NC_008149.1 RefSeq gene 3024685 3025623 . - . ID=gene2818;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=YPN_RS14105;old_locus_tag=YPN_2680 NC_008149.1 Protein Homology CDS 3024685 3025623 . - 0 ID=cds2747;Parent=gene2818;Dbxref=Genbank:WP_002208798.1;Name=WP_002208798.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=WP_002208798.1;transl_table=11 NC_008149.1 RefSeq gene 3025620 3026753 . - . ID=gene2819;Name=YPN_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14110;old_locus_tag=YPN_2681 NC_008149.1 Protein Homology CDS 3025620 3026753 . - 0 ID=cds2748;Parent=gene2819;Dbxref=Genbank:WP_002208799.1;Name=WP_002208799.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component;gbkey=CDS;product=PTS fructose transporter subunit IIA;protein_id=WP_002208799.1;transl_table=11 NC_008149.1 RefSeq gene 3027015 3027470 . + . ID=gene2820;Name=YPN_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14115;old_locus_tag=YPN_2682 NC_008149.1 Protein Homology CDS 3027015 3027470 . + 0 ID=cds2749;Parent=gene2820;Dbxref=Genbank:WP_002208801.1;Name=WP_002208801.1;gbkey=CDS;product=ADP-ribose pyrophosphatase;protein_id=WP_002208801.1;transl_table=11 NC_008149.1 RefSeq gene 3027583 3028581 . - . ID=gene2821;Name=YPN_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14120;old_locus_tag=YPN_2683 NC_008149.1 Protein Homology CDS 3027583 3028581 . - 0 ID=cds2750;Parent=gene2821;Dbxref=Genbank:WP_002208802.1;Name=WP_002208802.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002208802.1;transl_table=11 NC_008149.1 RefSeq gene 3028617 3030131 . - . ID=gene2822;Name=YPN_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14125;old_locus_tag=YPN_2684 NC_008149.1 Protein Homology CDS 3028617 3030131 . - 0 ID=cds2751;Parent=gene2822;Dbxref=Genbank:WP_002363696.1;Name=WP_002363696.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002363696.1;transl_table=11 NC_008149.1 RefSeq gene 3030300 3031388 . - . ID=gene2823;Name=YPN_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14130;old_locus_tag=YPN_2685 NC_008149.1 Protein Homology CDS 3030300 3031388 . - 0 ID=cds2752;Parent=gene2823;Dbxref=Genbank:WP_002208804.1;Name=WP_002208804.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002208804.1;transl_table=11 NC_008149.1 RefSeq gene 3031504 3032214 . - . ID=gene2824;Name=YPN_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14135;old_locus_tag=YPN_2686 NC_008149.1 Protein Homology CDS 3031504 3032214 . - 0 ID=cds2753;Parent=gene2824;Dbxref=Genbank:WP_002208805.1;Name=WP_002208805.1;gbkey=CDS;product=ribose-5-phosphate isomerase A 2;protein_id=WP_002208805.1;transl_table=11 NC_008149.1 RefSeq gene 3032234 3033787 . - . ID=gene2825;Name=YPN_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14140;old_locus_tag=YPN_2687 NC_008149.1 Protein Homology CDS 3032234 3033787 . - 0 ID=cds2754;Parent=gene2825;Dbxref=Genbank:WP_002208806.1;Name=WP_002208806.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002208806.1;transl_table=11 NC_008149.1 RefSeq gene 3033791 3035287 . - . ID=gene2826;Name=YPN_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14145;old_locus_tag=YPN_2688 NC_008149.1 Protein Homology CDS 3033791 3035287 . - 0 ID=cds2755;Parent=gene2826;Dbxref=Genbank:WP_002208807.1;Name=WP_002208807.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002208807.1;transl_table=11 NC_008149.1 RefSeq gene 3035639 3036781 . + . ID=gene2827;Name=YPN_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14150;old_locus_tag=YPN_2689 NC_008149.1 Protein Homology CDS 3035639 3036781 . + 0 ID=cds2756;Parent=gene2827;Dbxref=Genbank:WP_002208808.1;Name=WP_002208808.1;gbkey=CDS;product=fumarylacetoacetate hydrolase;protein_id=WP_002208808.1;transl_table=11 NC_008149.1 RefSeq gene 3036793 3037743 . + . ID=gene2828;Name=YPN_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14155;old_locus_tag=YPN_2690 NC_008149.1 Protein Homology CDS 3036793 3037743 . + 0 ID=cds2757;Parent=gene2828;Dbxref=Genbank:WP_002264752.1;Name=WP_002264752.1;gbkey=CDS;product=dihydrofolate reductase;protein_id=WP_002264752.1;transl_table=11 NC_008149.1 RefSeq gene 3037754 3038569 . + . ID=gene2829;Name=YPN_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14160;old_locus_tag=YPN_2691 NC_008149.1 Protein Homology CDS 3037754 3038569 . + 0 ID=cds2758;Parent=gene2829;Dbxref=Genbank:WP_002208810.1;Name=WP_002208810.1;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=WP_002208810.1;transl_table=11 NC_008149.1 RefSeq gene 3038638 3038892 . - . ID=gene2830;Name=YPN_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14165;old_locus_tag=YPN_2692 NC_008149.1 Protein Homology CDS 3038638 3038892 . - 0 ID=cds2759;Parent=gene2830;Dbxref=Genbank:WP_002208811.1;Name=WP_002208811.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208811.1;transl_table=11 NC_008149.1 RefSeq gene 3039267 3040511 . + . ID=gene2831;Name=YPN_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14170;old_locus_tag=YPN_2693 NC_008149.1 Protein Homology CDS 3039267 3040511 . + 0 ID=cds2760;Parent=gene2831;Dbxref=Genbank:WP_002208812.1;Name=WP_002208812.1;Note=tryptophan transporter of high affinity;gbkey=CDS;product=tryptophan permease;protein_id=WP_002208812.1;transl_table=11 NC_008149.1 RefSeq gene 3040615 3041187 . + . ID=gene2832;Name=YPN_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14175;old_locus_tag=YPN_2694 NC_008149.1 Protein Homology CDS 3040615 3041187 . + 0 ID=cds2761;Parent=gene2832;Dbxref=Genbank:WP_002228019.1;Name=WP_002228019.1;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;gbkey=CDS;product=elongation factor P-like protein;protein_id=WP_002228019.1;transl_table=11 NC_008149.1 RefSeq gene 3041327 3042520 . - . ID=gene2833;Name=YPN_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14180;old_locus_tag=YPN_2695 NC_008149.1 Protein Homology CDS 3041327 3042520 . - 0 ID=cds2762;Parent=gene2833;Dbxref=Genbank:WP_002208813.1;Name=WP_002208813.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;gbkey=CDS;product=mannonate dehydratase;protein_id=WP_002208813.1;transl_table=11 NC_008149.1 RefSeq gene 3043105 3044577 . + . ID=gene2834;Name=YPN_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14185;old_locus_tag=YPN_2696 NC_008149.1 Protein Homology CDS 3043105 3044577 . + 0 ID=cds2763;Parent=gene2834;Dbxref=Genbank:WP_002208815.1;Name=WP_002208815.1;gbkey=CDS;product=D-mannonate oxidoreductase;protein_id=WP_002208815.1;transl_table=11 NC_008149.1 RefSeq gene 3044721 3045464 . - . ID=gene2835;Name=YPN_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14190;old_locus_tag=YPN_2697 NC_008149.1 Protein Homology CDS 3044721 3045464 . - 0 ID=cds2764;Parent=gene2835;Dbxref=Genbank:WP_002208816.1;Name=WP_002208816.1;Note=regulates the expression of uxuBA;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208816.1;transl_table=11 NC_008149.1 RefSeq gene 3045835 3045948 . + . ID=gene2836;Name=YPN_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14195 NC_008149.1 Protein Homology CDS 3045835 3045948 . + 0 ID=cds2765;Parent=gene2836;Dbxref=Genbank:WP_002208817.1;Name=WP_002208817.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208817.1;transl_table=11 NC_008149.1 RefSeq gene 3046272 3047255 . + . ID=gene2837;Name=YPN_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14200;old_locus_tag=YPN_2699 NC_008149.1 Protein Homology CDS 3046272 3047255 . + 0 ID=cds2766;Parent=gene2837;Dbxref=Genbank:WP_002208819.1;Name=WP_002208819.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208819.1;transl_table=11 NC_008149.1 RefSeq gene 3047314 3048015 . + . ID=gene2838;Name=YPN_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14205;old_locus_tag=YPN_2700 NC_008149.1 Protein Homology CDS 3047314 3048015 . + 0 ID=cds2767;Parent=gene2838;Dbxref=Genbank:WP_002208820.1;Name=WP_002208820.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208820.1;transl_table=11 NC_008149.1 RefSeq gene 3048457 3049041 . + . ID=gene2839;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;gene_synonym=yeiV;locus_tag=YPN_RS14210;old_locus_tag=YPN_2701 NC_008149.1 Protein Homology CDS 3048457 3049041 . + 0 ID=cds2768;Parent=gene2839;Dbxref=Genbank:WP_002208822.1;Name=WP_002208822.1;Note=mutational suppressor of prc thermosensitivity;gbkey=CDS;gene=spr;product=hypothetical protein;protein_id=WP_002208822.1;transl_table=11 NC_008149.1 RefSeq gene 3049737 3051209 . + . ID=gene2840;Name=YPN_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14215;old_locus_tag=YPN_2702 NC_008149.1 Protein Homology CDS 3049737 3051209 . + 0 ID=cds2769;Parent=gene2840;Dbxref=Genbank:WP_002229119.1;Name=WP_002229119.1;Note=involved in resistance to the phages N4 and lambda;gbkey=CDS;product=phage resistance protein;protein_id=WP_002229119.1;transl_table=11 NC_008149.1 RefSeq gene 3051291 3053099 . + . ID=gene2841;Name=YPN_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14220;old_locus_tag=YPN_2703 NC_008149.1 Protein Homology CDS 3051291 3053099 . + 0 ID=cds2770;Parent=gene2841;Dbxref=Genbank:WP_002208825.1;Name=WP_002208825.1;Note=with YejBEF is involved in resistance to microcin C;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002208825.1;transl_table=11 NC_008149.1 RefSeq gene 3053109 3054209 . + . ID=gene2842;Name=YPN_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14225;old_locus_tag=YPN_2704 NC_008149.1 Protein Homology CDS 3053109 3054209 . + 0 ID=cds2771;Parent=gene2842;Dbxref=Genbank:WP_002208826.1;Name=WP_002208826.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11 NC_008149.1 RefSeq gene 3054212 3055237 . + . ID=gene2843;Name=YPN_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14230;old_locus_tag=YPN_2705 NC_008149.1 Protein Homology CDS 3054212 3055237 . + 0 ID=cds2772;Parent=gene2843;Dbxref=Genbank:WP_002353954.1;Name=WP_002353954.1;Note=part of the microcin C transport system;gbkey=CDS;product=microcin C ABC transporter permease;protein_id=WP_002353954.1;transl_table=11 NC_008149.1 RefSeq gene 3055239 3056831 . + . ID=gene2844;Name=YPN_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14235;old_locus_tag=YPN_2706 NC_008149.1 Protein Homology CDS 3055239 3056831 . + 0 ID=cds2773;Parent=gene2844;Dbxref=Genbank:WP_002208828.1;Name=WP_002208828.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002208828.1;transl_table=11 NC_008149.1 RefSeq gene 3056892 3057236 . - . ID=gene2845;Name=YPN_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14240;old_locus_tag=YPN_2707 NC_008149.1 Protein Homology CDS 3056892 3057236 . - 0 ID=cds2774;Parent=gene2845;Dbxref=Genbank:WP_002208829.1;Name=WP_002208829.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208829.1;transl_table=11 NC_008149.1 RefSeq gene 3058203 3059402 . - . ID=gene2846;Name=YPN_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14245;old_locus_tag=YPN_2709 NC_008149.1 Protein Homology CDS 3058203 3059402 . - 0 ID=cds2775;Parent=gene2846;Dbxref=Genbank:WP_002208831.1;Name=WP_002208831.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;product=Bcr/CflA family drug resistance efflux transporter;protein_id=WP_002208831.1;transl_table=11 NC_008149.1 RefSeq gene 3059506 3060213 . - . ID=gene2847;Name=YPN_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14250;old_locus_tag=YPN_2710 NC_008149.1 Protein Homology CDS 3059506 3060213 . - 0 ID=cds2776;Parent=gene2847;Dbxref=Genbank:WP_002208832.1;Name=WP_002208832.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;product=ribosomal small subunit pseudouridine synthase A;protein_id=WP_002208832.1;transl_table=11 NC_008149.1 RefSeq gene 3060727 3062484 . + . ID=gene2848;Name=YPN_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14255;old_locus_tag=YPN_2711 NC_008149.1 Protein Homology CDS 3060727 3062484 . + 0 ID=cds2777;Parent=gene2848;Dbxref=Genbank:WP_002208833.1;Name=WP_002208833.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208833.1;transl_table=11 NC_008149.1 RefSeq gene 3062646 3062930 . + . ID=gene2849;Name=YPN_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14260;old_locus_tag=YPN_2712 NC_008149.1 Protein Homology CDS 3062646 3062930 . + 0 ID=cds2778;Parent=gene2849;Dbxref=Genbank:WP_002208834.1;Name=WP_002208834.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3062959 3063682 . + . ID=id238;gbkey=repeat_region NC_008149.1 RefSeq gene 3063069 3063527 . - . ID=gene2850;Name=YPN_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14265;old_locus_tag=YPN_2713 NC_008149.1 Protein Homology CDS 3063069 3063527 . - 0 ID=cds2779;Parent=gene2850;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 3063728 3064732 . - . ID=gene2851;Name=YPN_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14270;old_locus_tag=YPN_2714 NC_008149.1 Protein Homology CDS 3063728 3064732 . - 0 ID=cds2780;Parent=gene2851;Dbxref=Genbank:WP_011566199.1;Name=WP_011566199.1;gbkey=CDS;product=Nucleoid-associated protein YPN_2714;protein_id=WP_011566199.1;transl_table=11 NC_008149.1 RefSeq gene 3064910 3065137 . + . ID=gene2852;Name=YPN_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14275;old_locus_tag=YPN_2715 NC_008149.1 Protein Homology CDS 3064910 3065137 . + 0 ID=cds2781;Parent=gene2852;Dbxref=Genbank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208836.1;transl_table=11 NC_008149.1 RefSeq gene 3065165 3066961 . + . ID=gene2853;Name=YPN_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14280;old_locus_tag=YPN_2716 NC_008149.1 Protein Homology CDS 3065165 3066961 . + 0 ID=cds2782;Parent=gene2853;Dbxref=Genbank:WP_002208837.1;Name=WP_002208837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208837.1;transl_table=11 NC_008149.1 RefSeq gene 3067066 3067142 . + . ID=gene2854;Name=YPN_RS14285;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS14285;old_locus_tag=YPN_r077 NC_008149.1 tRNAscan-SE tRNA 3067066 3067142 . + . ID=rna67;Parent=gene2854;anticodon=(pos:3067100..3067102);gbkey=tRNA;product=tRNA-Pro NC_008149.1 tRNAscan-SE exon 3067066 3067142 . + . ID=id239;Parent=rna67;anticodon=(pos:3067100..3067102);gbkey=tRNA;product=tRNA-Pro NC_008149.1 RefSeq repeat_region 3067813 3068365 . + . ID=id240;gbkey=repeat_region NC_008149.1 RefSeq gene 3067932 3069080 . + . ID=gene2855;Name=YPN_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14290;old_locus_tag=YPN_2718 NC_008149.1 Protein Homology CDS 3067932 3069080 . + 0 ID=cds2783;Parent=gene2855;Dbxref=Genbank:WP_002208839.1;Name=WP_002208839.1;gbkey=CDS;product=HNH endonuclease;protein_id=WP_002208839.1;transl_table=11 NC_008149.1 RefSeq gene 3069093 3069581 . + . ID=gene2856;Name=YPN_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14295;old_locus_tag=YPN_2719 NC_008149.1 Protein Homology CDS 3069093 3069581 . + 0 ID=cds2784;Parent=gene2856;Dbxref=Genbank:WP_002208840.1;Name=WP_002208840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208840.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3069840 3069960 . + . ID=id241;gbkey=repeat_region NC_008149.1 RefSeq gene 3070281 3070643 . + . ID=gene2857;Name=YPN_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14305;old_locus_tag=YPN_2721 NC_008149.1 Protein Homology CDS 3070281 3070643 . + 0 ID=cds2785;Parent=gene2857;Dbxref=Genbank:WP_002208841.1;Name=WP_002208841.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208841.1;transl_table=11 NC_008149.1 RefSeq gene 3070769 3072205 . - . ID=gene2858;Name=YPN_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14310;old_locus_tag=YPN_2722 NC_008149.1 Protein Homology CDS 3070769 3072205 . - 0 ID=cds2786;Parent=gene2858;Dbxref=Genbank:WP_002208842.1;Name=WP_002208842.1;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=WP_002208842.1;transl_table=11 NC_008149.1 RefSeq gene 3072496 3073236 . - . ID=gene2859;Name=YPN_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14315;old_locus_tag=YPN_2723 NC_008149.1 Protein Homology CDS 3072496 3073236 . - 0 ID=cds2787;Parent=gene2859;Dbxref=Genbank:WP_002208843.1;Name=WP_002208843.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208843.1;transl_table=11 NC_008149.1 RefSeq gene 3073534 3074313 . - . ID=gene2860;Name=YPN_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14320;old_locus_tag=YPN_2724 NC_008149.1 Protein Homology CDS 3073534 3074313 . - 0 ID=cds2788;Parent=gene2860;Dbxref=Genbank:WP_002208845.1;Name=WP_002208845.1;gbkey=CDS;product=tail protein;protein_id=WP_002208845.1;transl_table=11 NC_008149.1 RefSeq gene 3074410 3074757 . - . ID=gene2861;Name=YPN_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14325;old_locus_tag=YPN_2725 NC_008149.1 Protein Homology CDS 3074410 3074757 . - 0 ID=cds2789;Parent=gene2861;Dbxref=Genbank:WP_002208846.1;Name=WP_002208846.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208846.1;transl_table=11 NC_008149.1 RefSeq gene 3074754 3075014 . - . ID=gene2862;Name=YPN_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14330;old_locus_tag=YPN_2726 NC_008149.1 Protein Homology CDS 3074754 3075014 . - 0 ID=cds2790;Parent=gene2862;Dbxref=Genbank:WP_002215458.1;Name=WP_002215458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215458.1;transl_table=11 NC_008149.1 RefSeq gene 3075011 3076147 . - . ID=gene2863;Name=YPN_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14335;old_locus_tag=YPN_2727 NC_008149.1 Protein Homology CDS 3075011 3076147 . - 0 ID=cds2791;Parent=gene2863;Dbxref=Genbank:WP_002208847.1;Name=WP_002208847.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208847.1;transl_table=11 NC_008149.1 RefSeq gene 3076151 3076606 . - . ID=gene2864;Name=YPN_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14340;old_locus_tag=YPN_2728 NC_008149.1 Protein Homology CDS 3076151 3076606 . - 0 ID=cds2792;Parent=gene2864;Dbxref=Genbank:WP_002208848.1;Name=WP_002208848.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208848.1;transl_table=11 NC_008149.1 RefSeq gene 3076603 3077199 . - . ID=gene2865;Name=YPN_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14345;old_locus_tag=YPN_2729 NC_008149.1 Protein Homology CDS 3076603 3077199 . - 0 ID=cds2793;Parent=gene2865;Dbxref=Genbank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;product=baseplate assembly protein;protein_id=WP_002215460.1;transl_table=11 NC_008149.1 RefSeq gene 3077215 3078270 . - . ID=gene2866;Name=YPN_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14350;old_locus_tag=YPN_2730 NC_008149.1 Protein Homology CDS 3077215 3078270 . - 0 ID=cds2794;Parent=gene2866;Dbxref=Genbank:WP_002208850.1;Name=WP_002208850.1;gbkey=CDS;product=tail protein;protein_id=WP_002208850.1;transl_table=11 NC_008149.1 RefSeq gene 3078267 3079673 . - . ID=gene2867;Name=YPN_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14355;old_locus_tag=YPN_2731 NC_008149.1 Protein Homology CDS 3078267 3079673 . - 0 ID=cds2795;Parent=gene2867;Dbxref=Genbank:WP_002208852.1;Name=WP_002208852.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208852.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3079731 3079900 . + . ID=id242;gbkey=repeat_region NC_008149.1 RefSeq gene 3079940 3081433 . - . ID=gene2868;Name=YPN_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14360;old_locus_tag=YPN_2732 NC_008149.1 Protein Homology CDS 3079940 3081433 . - 0 ID=cds2796;Parent=gene2868;Dbxref=Genbank:WP_002208853.1;Name=WP_002208853.1;gbkey=CDS;product=coat protein;protein_id=WP_002208853.1;transl_table=11 NC_008149.1 RefSeq gene 3081554 3081853 . - . ID=gene2869;Name=YPN_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14365;old_locus_tag=YPN_2733 NC_008149.1 Protein Homology CDS 3081554 3081853 . - 0 ID=cds2797;Parent=gene2869;Dbxref=Genbank:WP_002208854.1;Name=WP_002208854.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208854.1;transl_table=11 NC_008149.1 RefSeq gene 3081855 3082223 . - . ID=gene2870;Name=YPN_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14370;old_locus_tag=YPN_2735 NC_008149.1 Protein Homology CDS 3081855 3082223 . - 0 ID=cds2798;Parent=gene2870;Dbxref=Genbank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002208855.1;transl_table=11 NC_008149.1 RefSeq gene 3082245 3083753 . - . ID=gene2871;Name=YPN_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14375;old_locus_tag=YPN_2736 NC_008149.1 Protein Homology CDS 3082245 3083753 . - 0 ID=cds2799;Parent=gene2871;Dbxref=Genbank:WP_002208856.1;Name=WP_002208856.1;gbkey=CDS;product=tail protein;protein_id=WP_002208856.1;transl_table=11 NC_008149.1 RefSeq gene 3083750 3083944 . - . ID=gene2872;Name=YPN_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14380;old_locus_tag=YPN_2737 NC_008149.1 Protein Homology CDS 3083750 3083944 . - 0 ID=cds2800;Parent=gene2872;Dbxref=Genbank:WP_002208857.1;Name=WP_002208857.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208857.1;transl_table=11 NC_008149.1 RefSeq gene 3083949 3084518 . - . ID=gene2873;Name=YPN_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14385;old_locus_tag=YPN_2738 NC_008149.1 Protein Homology CDS 3083949 3084518 . - 0 ID=cds2801;Parent=gene2873;Dbxref=Genbank:WP_002363609.1;Name=WP_002363609.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002363609.1;transl_table=11 NC_008149.1 RefSeq gene 3084612 3084902 . - . ID=gene2874;Name=YPN_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14390;old_locus_tag=YPN_2739 NC_008149.1 Protein Homology CDS 3084612 3084902 . - 0 ID=cds2802;Parent=gene2874;Dbxref=Genbank:WP_002208859.1;Name=WP_002208859.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208859.1;transl_table=11 NC_008149.1 RefSeq gene 3085533 3086321 . - . ID=gene2875;Name=YPN_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14395;old_locus_tag=YPN_2740 NC_008149.1 Protein Homology CDS 3085533 3086321 . - 0 ID=cds2803;Parent=gene2875;Dbxref=Genbank:WP_002228606.1;Name=WP_002228606.1;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=WP_002228606.1;transl_table=11 NC_008149.1 RefSeq gene 3086297 3087106 . - . ID=gene2876;Name=YPN_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14400;old_locus_tag=YPN_2741 NC_008149.1 Protein Homology CDS 3086297 3087106 . - 0 ID=cds2804;Parent=gene2876;Dbxref=Genbank:WP_002215467.1;Name=WP_002215467.1;gbkey=CDS;product=alkaline phosphatase;protein_id=WP_002215467.1;transl_table=11 NC_008149.1 RefSeq gene 3087112 3087761 . - . ID=gene2877;Name=YPN_RS14405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS14405;old_locus_tag=YPN_2742;pseudo=true NC_008149.1 Protein Homology CDS 3087112 3087761 . - 0 ID=cds2805;Parent=gene2877;exception=annotated by transcript or proteomic data;gbkey=CDS;product=aldolase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 3087818 3089122 . - . ID=gene2878;Name=YPN_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14410;old_locus_tag=YPN_2743 NC_008149.1 Protein Homology CDS 3087818 3089122 . - 0 ID=cds2806;Parent=gene2878;Dbxref=Genbank:WP_002208862.1;Name=WP_002208862.1;gbkey=CDS;product=tRNA synthetase;protein_id=WP_002208862.1;transl_table=11 NC_008149.1 RefSeq gene 3089333 3089812 . - . ID=gene2879;Name=YPN_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14415;old_locus_tag=YPN_2744 NC_008149.1 Protein Homology CDS 3089333 3089812 . - 0 ID=cds2807;Parent=gene2879;Dbxref=Genbank:WP_002215470.1;Name=WP_002215470.1;gbkey=CDS;product=antitermination protein Q;protein_id=WP_002215470.1;transl_table=11 NC_008149.1 RefSeq gene 3090086 3090808 . + . ID=gene2880;Name=YPN_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14420;old_locus_tag=YPN_2745 NC_008149.1 Protein Homology CDS 3090086 3090808 . + 0 ID=cds2808;Parent=gene2880;Dbxref=Genbank:WP_002208864.1;Name=WP_002208864.1;gbkey=CDS;product=peptidase S24;protein_id=WP_002208864.1;transl_table=11 NC_008149.1 RefSeq gene 3091014 3091256 . + . ID=gene2881;Name=YPN_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14425;old_locus_tag=YPN_2747 NC_008149.1 Protein Homology CDS 3091014 3091256 . + 0 ID=cds2809;Parent=gene2881;Dbxref=Genbank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;product=virulence protein MsgA;protein_id=WP_002208866.1;transl_table=11 NC_008149.1 RefSeq gene 3091428 3092363 . + . ID=gene2882;Name=YPN_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14430;old_locus_tag=YPN_2748 NC_008149.1 Protein Homology CDS 3091428 3092363 . + 0 ID=cds2810;Parent=gene2882;Dbxref=Genbank:WP_002208867.1;Name=WP_002208867.1;gbkey=CDS;product=outer membrane protease;protein_id=WP_002208867.1;transl_table=11 NC_008149.1 RefSeq gene 3092770 3094557 . + . ID=gene2883;Name=YPN_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14435;old_locus_tag=YPN_2749 NC_008149.1 Protein Homology CDS 3092770 3094557 . + 0 ID=cds2811;Parent=gene2883;Dbxref=Genbank:WP_002208868.1;Name=WP_002208868.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=WP_002208868.1;transl_table=11 NC_008149.1 RefSeq gene 3094631 3095620 . - . ID=gene2884;Name=YPN_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14440;old_locus_tag=YPN_2750 NC_008149.1 Protein Homology CDS 3094631 3095620 . - 0 ID=cds2812;Parent=gene2884;Dbxref=Genbank:WP_002363585.1;Name=WP_002363585.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002363585.1;transl_table=11 NC_008149.1 RefSeq gene 3096036 3097562 . + . ID=gene2885;Name=YPN_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14445;old_locus_tag=YPN_2751 NC_008149.1 Protein Homology CDS 3096036 3097562 . + 0 ID=cds2813;Parent=gene2885;Dbxref=Genbank:WP_002208870.1;Name=WP_002208870.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002208870.1;transl_table=11 NC_008149.1 RefSeq gene 3097549 3097719 . - . ID=gene2886;Name=YPN_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14450 NC_008149.1 Protein Homology CDS 3097549 3097719 . - 0 ID=cds2814;Parent=gene2886;Dbxref=Genbank:WP_002208871.1;Name=WP_002208871.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208871.1;transl_table=11 NC_008149.1 RefSeq gene 3097837 3099003 . + . ID=gene2887;Name=YPN_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14455;old_locus_tag=YPN_2753 NC_008149.1 Protein Homology CDS 3097837 3099003 . + 0 ID=cds2815;Parent=gene2887;Dbxref=Genbank:WP_002228026.1;Name=WP_002228026.1;Note=this protein has no known enzymatic function;gbkey=CDS;product=beta-lactam-binding protein AmpH;protein_id=WP_002228026.1;transl_table=11 NC_008149.1 RefSeq gene 3099191 3099266 . - . ID=gene2888;Name=YPN_RS14460;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS14460;old_locus_tag=YPN_r078 NC_008149.1 tRNAscan-SE tRNA 3099191 3099266 . - . ID=rna68;Parent=gene2888;anticodon=(pos:complement(3099231..3099233));gbkey=tRNA;product=tRNA-Thr NC_008149.1 tRNAscan-SE exon 3099191 3099266 . - . ID=id243;Parent=rna68;anticodon=(pos:complement(3099231..3099233));gbkey=tRNA;product=tRNA-Thr NC_008149.1 RefSeq gene 3099272 3099359 . - . ID=gene2889;Name=YPN_RS14465;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS14465;old_locus_tag=YPN_r079 NC_008149.1 tRNAscan-SE tRNA 3099272 3099359 . - . ID=rna69;Parent=gene2889;anticodon=(pos:complement(3099323..3099325));gbkey=tRNA;product=tRNA-Ser NC_008149.1 tRNAscan-SE exon 3099272 3099359 . - . ID=id244;Parent=rna69;anticodon=(pos:complement(3099323..3099325));gbkey=tRNA;product=tRNA-Ser NC_008149.1 RefSeq repeat_region 3099683 3100406 . + . ID=id245;gbkey=repeat_region NC_008149.1 RefSeq gene 3099793 3100251 . - . ID=gene2890;Name=YPN_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14470;old_locus_tag=YPN_2754 NC_008149.1 Protein Homology CDS 3099793 3100251 . - 0 ID=cds2816;Parent=gene2890;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 3100453 3101568 . - . ID=gene2891;Name=YPN_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14475;old_locus_tag=YPN_2755 NC_008149.1 Protein Homology CDS 3100453 3101568 . - 0 ID=cds2817;Parent=gene2891;Dbxref=Genbank:WP_002210826.1;Name=WP_002210826.1;gbkey=CDS;product=porin;protein_id=WP_002210826.1;transl_table=11 NC_008149.1 RefSeq gene 3102671 3103825 . + . ID=gene2892;Name=YPN_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14485;old_locus_tag=YPN_2756 NC_008149.1 Protein Homology CDS 3102671 3103825 . + 0 ID=cds2818;Parent=gene2892;Dbxref=Genbank:WP_002210825.1;Name=WP_002210825.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11 NC_008149.1 RefSeq gene 3103924 3105801 . + . ID=gene2893;Name=YPN_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14490;old_locus_tag=YPN_2757 NC_008149.1 Protein Homology CDS 3103924 3105801 . + 0 ID=cds2819;Parent=gene2893;Dbxref=Genbank:WP_002231290.1;Name=WP_002231290.1;gbkey=CDS;product=ATPase;protein_id=WP_002231290.1;transl_table=11 NC_008149.1 RefSeq gene 3105969 3106541 . + . ID=gene2894;Name=YPN_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14495;old_locus_tag=YPN_2758 NC_008149.1 Protein Homology CDS 3105969 3106541 . + 0 ID=cds2820;Parent=gene2894;Dbxref=Genbank:WP_002216094.1;Name=WP_002216094.1;gbkey=CDS;product=histidine phosphotransferase;protein_id=WP_002216094.1;transl_table=11 NC_008149.1 RefSeq gene 3106544 3107197 . + . ID=gene2895;Name=YPN_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14500;old_locus_tag=YPN_2759 NC_008149.1 Protein Homology CDS 3106544 3107197 . + 0 ID=cds2821;Parent=gene2895;Dbxref=Genbank:WP_002210824.1;Name=WP_002210824.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210824.1;transl_table=11 NC_008149.1 RefSeq gene 3107265 3110045 . - . ID=gene2896;Name=YPN_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14505;old_locus_tag=YPN_2760 NC_008149.1 Protein Homology CDS 3107265 3110045 . - 0 ID=cds2822;Parent=gene2896;Dbxref=Genbank:WP_002210823.1;Name=WP_002210823.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002210823.1;transl_table=11 NC_008149.1 RefSeq gene 3110198 3110323 . - . ID=gene2897;Name=YPN_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14510 NC_008149.1 Protein Homology CDS 3110198 3110323 . - 0 ID=cds2823;Parent=gene2897;Dbxref=Genbank:WP_002210822.1;Name=WP_002210822.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210822.1;transl_table=11 NC_008149.1 RefSeq gene 3110326 3113001 . - . ID=gene2898;Name=YPN_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14515;old_locus_tag=YPN_2761 NC_008149.1 Protein Homology CDS 3110326 3113001 . - 0 ID=cds2824;Parent=gene2898;Dbxref=Genbank:WP_002210821.1;Name=WP_002210821.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_002210821.1;transl_table=11 NC_008149.1 RefSeq gene 3113263 3113991 . + . ID=gene2899;Name=YPN_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14520;old_locus_tag=YPN_2762 NC_008149.1 Protein Homology CDS 3113263 3113991 . + 0 ID=cds2825;Parent=gene2899;Dbxref=Genbank:WP_002210820.1;Name=WP_002210820.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=ubiquinone biosynthesis O-methyltransferase;protein_id=WP_002210820.1;transl_table=11 NC_008149.1 RefSeq gene 3114485 3116773 . + . ID=gene2900;Name=YPN_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14525;old_locus_tag=YPN_2763 NC_008149.1 Protein Homology CDS 3114485 3116773 . + 0 ID=cds2826;Parent=gene2900;Dbxref=Genbank:WP_002210818.1;Name=WP_002210818.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_002210818.1;transl_table=11 NC_008149.1 RefSeq gene 3116936 3118066 . + . ID=gene2901;Name=YPN_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14530;old_locus_tag=YPN_2764 NC_008149.1 Protein Homology CDS 3116936 3118066 . + 0 ID=cds2827;Parent=gene2901;Dbxref=Genbank:WP_002210817.1;Name=WP_002210817.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11 NC_008149.1 RefSeq gene 3118070 3118327 . + . ID=gene2902;Name=YPN_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14535;old_locus_tag=YPN_2765 NC_008149.1 Protein Homology CDS 3118070 3118327 . + 0 ID=cds2828;Parent=gene2902;Dbxref=Genbank:WP_002210816.1;Name=WP_002210816.1;gbkey=CDS;product=(2Fe-2S) ferredoxin;protein_id=WP_002210816.1;transl_table=11 NC_008149.1 RefSeq gene 3118362 3118871 . + . ID=gene2903;Name=YPN_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14540;old_locus_tag=YPN_2766 NC_008149.1 Protein Homology CDS 3118362 3118871 . + 0 ID=cds2829;Parent=gene2903;Dbxref=Genbank:WP_002210815.1;Name=WP_002210815.1;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;gbkey=CDS;product=ecotin;protein_id=WP_002210815.1;transl_table=11 NC_008149.1 RefSeq gene 3118929 3120122 . - . ID=gene2904;Name=YPN_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14545;old_locus_tag=YPN_2767 NC_008149.1 Protein Homology CDS 3118929 3120122 . - 0 ID=cds2830;Parent=gene2904;Dbxref=Genbank:WP_002210814.1;Name=WP_002210814.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210814.1;transl_table=11 NC_008149.1 RefSeq gene 3120741 3121949 . + . ID=gene2905;Name=YPN_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14550;old_locus_tag=YPN_2768 NC_008149.1 Protein Homology CDS 3120741 3121949 . + 0 ID=cds2831;Parent=gene2905;Dbxref=Genbank:WP_002221775.1;Name=WP_002221775.1;Note=tyrosine specific permease;gbkey=CDS;product=tyrosine transporter TyrP;protein_id=WP_002221775.1;transl_table=11 NC_008149.1 RefSeq gene 3122206 3122748 . - . ID=gene2906;Name=YPN_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14555;old_locus_tag=YPN_2769 NC_008149.1 Protein Homology CDS 3122206 3122748 . - 0 ID=cds2832;Parent=gene2906;Dbxref=Genbank:WP_002210812.1;Name=WP_002210812.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210812.1;transl_table=11 NC_008149.1 RefSeq gene 3123106 3124548 . + . ID=gene2907;Name=YPN_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14560;old_locus_tag=YPN_2770 NC_008149.1 Protein Homology CDS 3123106 3124548 . + 0 ID=cds2833;Parent=gene2907;Dbxref=Genbank:WP_002228030.1;Name=WP_002228030.1;gbkey=CDS;product=catalase;protein_id=WP_002228030.1;transl_table=11 NC_008149.1 RefSeq gene 3124616 3126796 . - . ID=gene2908;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=YPN_RS14565;old_locus_tag=YPN_2771 NC_008149.1 Protein Homology CDS 3124616 3126796 . - 0 ID=cds2834;Parent=gene2908;Dbxref=Genbank:WP_002210810.1;Name=WP_002210810.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=WP_002210810.1;transl_table=11 NC_008149.1 RefSeq gene 3127066 3128181 . + . ID=gene2909;Name=YPN_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14570;old_locus_tag=YPN_2772 NC_008149.1 Protein Homology CDS 3127066 3128181 . + 0 ID=cds2835;Parent=gene2909;Dbxref=Genbank:WP_002210809.1;Name=WP_002210809.1;gbkey=CDS;product=phosphoporin protein E;protein_id=WP_002210809.1;transl_table=11 NC_008149.1 RefSeq gene 3128593 3129483 . + . ID=gene2910;Name=YPN_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14575;old_locus_tag=YPN_2773 NC_008149.1 Protein Homology CDS 3128593 3129483 . + 0 ID=cds2836;Parent=gene2910;Dbxref=Genbank:WP_002210807.1;Name=WP_002210807.1;gbkey=CDS;product=multidrug transporter;protein_id=WP_002210807.1;transl_table=11 NC_008149.1 RefSeq gene 3129608 3129811 . + . ID=gene2911;Name=YPN_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14580;old_locus_tag=YPN_2774 NC_008149.1 Protein Homology CDS 3129608 3129811 . + 0 ID=cds2837;Parent=gene2911;Dbxref=Genbank:WP_002210806.1;Name=WP_002210806.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210806.1;transl_table=11 NC_008149.1 RefSeq gene 3129929 3132235 . - . ID=gene2912;Name=YPN_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14585;old_locus_tag=YPN_2775 NC_008149.1 Protein Homology CDS 3129929 3132235 . - 0 ID=cds2838;Parent=gene2912;Dbxref=Genbank:WP_002210805.1;Name=WP_002210805.1;Note=biodegradative%3B catalyzes the formation of agmatine from arginine;gbkey=CDS;product=arginine decarboxylase;protein_id=WP_002210805.1;transl_table=11 NC_008149.1 RefSeq gene 3132305 3133639 . - . ID=gene2913;Name=YPN_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14590;old_locus_tag=YPN_2776 NC_008149.1 Protein Homology CDS 3132305 3133639 . - 0 ID=cds2839;Parent=gene2913;Dbxref=Genbank:WP_002210804.1;Name=WP_002210804.1;gbkey=CDS;product=arginine/agmatine antiporter;protein_id=WP_002210804.1;transl_table=11 NC_008149.1 RefSeq gene 3134105 3134941 . - . ID=gene2914;Name=YPN_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14595;old_locus_tag=YPN_2777 NC_008149.1 Protein Homology CDS 3134105 3134941 . - 0 ID=cds2840;Parent=gene2914;Dbxref=Genbank:WP_002210803.1;Name=WP_002210803.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210803.1;transl_table=11 NC_008149.1 RefSeq gene 3134938 3135876 . - . ID=gene2915;Name=YPN_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14600;old_locus_tag=YPN_2778 NC_008149.1 Protein Homology CDS 3134938 3135876 . - 0 ID=cds2841;Parent=gene2915;Dbxref=Genbank:WP_002210802.1;Name=WP_002210802.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210802.1;transl_table=11 NC_008149.1 RefSeq gene 3135873 3137027 . - . ID=gene2916;Name=YPN_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14605;old_locus_tag=YPN_2779 NC_008149.1 Protein Homology CDS 3135873 3137027 . - 0 ID=cds2842;Parent=gene2916;Dbxref=Genbank:WP_002210801.1;Name=WP_002210801.1;gbkey=CDS;product=osmoprotectant uptake system permease;protein_id=WP_002210801.1;transl_table=11 NC_008149.1 RefSeq gene 3137288 3137608 . - . ID=gene2917;Name=YPN_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14610;old_locus_tag=YPN_2780 NC_008149.1 Protein Homology CDS 3137288 3137608 . - 0 ID=cds2843;Parent=gene2917;Dbxref=Genbank:WP_002214181.1;Name=WP_002214181.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214181.1;transl_table=11 NC_008149.1 RefSeq gene 3137753 3138220 . - . ID=gene2918;Name=YPN_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14615;old_locus_tag=YPN_2781 NC_008149.1 Protein Homology CDS 3137753 3138220 . - 0 ID=cds2844;Parent=gene2918;Dbxref=Genbank:WP_002214183.1;Name=WP_002214183.1;gbkey=CDS;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_002214183.1;transl_table=11 NC_008149.1 RefSeq gene 3138956 3139810 . + . ID=gene2919;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=YPN_RS14620;old_locus_tag=YPN_2782 NC_008149.1 Protein Homology CDS 3138956 3139810 . + 0 ID=cds2845;Parent=gene2919;Dbxref=Genbank:WP_002210799.1;Name=WP_002210799.1;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_002210799.1;transl_table=11 NC_008149.1 RefSeq gene 3140014 3141429 . - . ID=gene2920;Name=YPN_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14625;old_locus_tag=YPN_2783 NC_008149.1 Protein Homology CDS 3140014 3141429 . - 0 ID=cds2846;Parent=gene2920;Dbxref=Genbank:WP_002210798.1;Name=WP_002210798.1;gbkey=CDS;product=amino acid decarboxylase;protein_id=WP_002210798.1;transl_table=11 NC_008149.1 RefSeq gene 3141453 3142310 . - . ID=gene2921;Name=YPN_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14630;old_locus_tag=YPN_2784 NC_008149.1 Protein Homology CDS 3141453 3142310 . - 0 ID=cds2847;Parent=gene2921;Dbxref=Genbank:WP_002210797.1;Name=WP_002210797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210797.1;transl_table=11 NC_008149.1 RefSeq gene 3142425 3143123 . - . ID=gene2922;Name=YPN_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14635;old_locus_tag=YPN_2785 NC_008149.1 Protein Homology CDS 3142425 3143123 . - 0 ID=cds2848;Parent=gene2922;Dbxref=Genbank:WP_002223523.1;Name=WP_002223523.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002223523.1;transl_table=11 NC_008149.1 RefSeq gene 3143217 3144053 . - . ID=gene2923;Name=YPN_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14640;old_locus_tag=YPN_2786 NC_008149.1 Protein Homology CDS 3143217 3144053 . - 0 ID=cds2849;Parent=gene2923;Dbxref=Genbank:WP_002210795.1;Name=WP_002210795.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210795.1;transl_table=11 NC_008149.1 RefSeq gene 3144050 3145126 . - . ID=gene2924;Name=YPN_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14645;old_locus_tag=YPN_2787 NC_008149.1 Protein Homology CDS 3144050 3145126 . - 0 ID=cds2850;Parent=gene2924;Dbxref=Genbank:WP_002210794.1;Name=WP_002210794.1;gbkey=CDS;product=amino acid ABC transporter permease;protein_id=WP_002210794.1;transl_table=11 NC_008149.1 RefSeq gene 3145126 3146727 . - . ID=gene2925;Name=YPN_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14650;old_locus_tag=YPN_2788 NC_008149.1 Protein Homology CDS 3145126 3146727 . - 0 ID=cds2851;Parent=gene2925;Dbxref=Genbank:WP_002210793.1;Name=WP_002210793.1;gbkey=CDS;product=urea ABC transporter permease;protein_id=WP_002210793.1;transl_table=11 NC_008149.1 RefSeq gene 3146851 3148119 . - . ID=gene2926;Name=YPN_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14655;old_locus_tag=YPN_2789 NC_008149.1 Protein Homology CDS 3146851 3148119 . - 0 ID=cds2852;Parent=gene2926;Dbxref=Genbank:WP_002210792.1;Name=WP_002210792.1;gbkey=CDS;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_002210792.1;transl_table=11 NC_008149.1 RefSeq gene 3148561 3149034 . - . ID=gene2927;Name=YPN_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14660;old_locus_tag=YPN_2790 NC_008149.1 Protein Homology CDS 3148561 3149034 . - 0 ID=cds2853;Parent=gene2927;Dbxref=Genbank:WP_002210791.1;Name=WP_002210791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210791.1;transl_table=11 NC_008149.1 RefSeq gene 3149280 3150161 . - . ID=gene2928;Name=YPN_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14665;old_locus_tag=YPN_2791 NC_008149.1 Protein Homology CDS 3149280 3150161 . - 0 ID=cds2854;Parent=gene2928;Dbxref=Genbank:WP_002210790.1;Name=WP_002210790.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210790.1;transl_table=11 NC_008149.1 RefSeq gene 3150164 3151024 . - . ID=gene2929;Name=YPN_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14670;old_locus_tag=YPN_2792 NC_008149.1 Protein Homology CDS 3150164 3151024 . - 0 ID=cds2855;Parent=gene2929;Dbxref=Genbank:WP_002210789.1;Name=WP_002210789.1;gbkey=CDS;product=phosphonate ABC transporter permease;protein_id=WP_002210789.1;transl_table=11 NC_008149.1 RefSeq gene 3151127 3152056 . - . ID=gene2930;Name=YPN_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14675;old_locus_tag=YPN_2793 NC_008149.1 Protein Homology CDS 3151127 3152056 . - 0 ID=cds2856;Parent=gene2930;Dbxref=Genbank:WP_002210788.1;Name=WP_002210788.1;gbkey=CDS;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_002210788.1;transl_table=11 NC_008149.1 RefSeq gene 3152093 3152929 . - . ID=gene2931;Name=YPN_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14680;old_locus_tag=YPN_2794 NC_008149.1 Protein Homology CDS 3152093 3152929 . - 0 ID=cds2857;Parent=gene2931;Dbxref=Genbank:WP_002210787.1;Name=WP_002210787.1;gbkey=CDS;product=phosphonates import ATP-binding protein PhnC;protein_id=WP_002210787.1;transl_table=11 NC_008149.1 RefSeq gene 3153137 3153385 . - . ID=gene2932;Name=YPN_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14685;old_locus_tag=YPN_2795 NC_008149.1 Protein Homology CDS 3153137 3153385 . - 0 ID=cds2858;Parent=gene2932;Dbxref=Genbank:WP_002210786.1;Name=WP_002210786.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210786.1;transl_table=11 NC_008149.1 RefSeq gene 3153570 3154673 . - . ID=gene2933;Name=YPN_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14690;old_locus_tag=YPN_2796 NC_008149.1 Protein Homology CDS 3153570 3154673 . - 0 ID=cds2859;Parent=gene2933;Dbxref=Genbank:WP_002210785.1;Name=WP_002210785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210785.1;transl_table=11 NC_008149.1 RefSeq gene 3154986 3155327 . + . ID=gene2934;Name=YPN_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14695;old_locus_tag=YPN_2798 NC_008149.1 Protein Homology CDS 3154986 3155327 . + 0 ID=cds2860;Parent=gene2934;Dbxref=Genbank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214185.1;transl_table=11 NC_008149.1 RefSeq gene 3155353 3155892 . - . ID=gene2935;Name=YPN_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14700;old_locus_tag=YPN_2799 NC_008149.1 Protein Homology CDS 3155353 3155892 . - 0 ID=cds2861;Parent=gene2935;Dbxref=Genbank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;product=adenylate cyclase;protein_id=WP_002210782.1;transl_table=11 NC_008149.1 RefSeq gene 3156102 3157814 . + . ID=gene2936;Name=YPN_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14705;old_locus_tag=YPN_2800 NC_008149.1 Protein Homology CDS 3156102 3157814 . + 0 ID=cds2862;Parent=gene2936;Dbxref=Genbank:WP_002210781.1;Name=WP_002210781.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;product=lactate dehydrogenase;protein_id=WP_002210781.1;transl_table=11 NC_008149.1 RefSeq gene 3157935 3158870 . - . ID=gene2937;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=YPN_RS14710;old_locus_tag=YPN_2801 NC_008149.1 Protein Homology CDS 3157935 3158870 . - 0 ID=cds2863;Parent=gene2937;Dbxref=Genbank:WP_002210780.1;Name=WP_002210780.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_002210780.1;transl_table=11 NC_008149.1 RefSeq gene 3159209 3159388 . + . ID=gene2938;Name=YPN_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14715;old_locus_tag=YPN_2802 NC_008149.1 Protein Homology CDS 3159209 3159388 . + 0 ID=cds2864;Parent=gene2938;Dbxref=Genbank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210778.1;transl_table=11 NC_008149.1 RefSeq gene 3159462 3160400 . - . ID=gene2939;Name=YPN_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14720;old_locus_tag=YPN_2803 NC_008149.1 Protein Homology CDS 3159462 3160400 . - 0 ID=cds2865;Parent=gene2939;Dbxref=Genbank:WP_002228612.1;Name=WP_002228612.1;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=WP_002228612.1;transl_table=11 NC_008149.1 RefSeq gene 3160700 3161629 . - . ID=gene2940;Name=YPN_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14725;old_locus_tag=YPN_2804 NC_008149.1 Protein Homology CDS 3160700 3161629 . - 0 ID=cds2866;Parent=gene2940;Dbxref=Genbank:WP_002210776.1;Name=WP_002210776.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210776.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3161932 3163706 . + . ID=id246;gbkey=repeat_region NC_008149.1 RefSeq gene 3162044 3162502 . - . ID=gene2941;Name=YPN_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14730;old_locus_tag=YPN_2805 NC_008149.1 Protein Homology CDS 3162044 3162502 . - 0 ID=cds2867;Parent=gene2941;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 3162492 3162647 . - . ID=gene2942;Name=YPN_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14735 NC_008149.1 Protein Homology CDS 3162492 3162647 . - 0 ID=cds2868;Parent=gene2942;Dbxref=Genbank:WP_002213757.1;Name=WP_002213757.1;gbkey=CDS;product=invasin;protein_id=WP_002213757.1;transl_table=11 NC_008149.1 RefSeq gene 3162713 3163714 . - . ID=gene2943;Name=YPN_RS14740;end_range=3163714,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS14740;old_locus_tag=YPN_2806;partial=true;pseudo=true NC_008149.1 Protein Homology CDS 3162713 3163714 . - 0 ID=cds2869;Parent=gene2943;Note=this helicase is not essential cell growth;end_range=3163714,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ATP-dependent RNA helicase RhlE;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 3163632 3164222 . - . ID=gene2944;Name=YPN_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14745;old_locus_tag=YPN_2807 NC_008149.1 Protein Homology CDS 3163632 3164222 . - 0 ID=cds2870;Parent=gene2944;Dbxref=Genbank:WP_002228614.1;Name=WP_002228614.1;gbkey=CDS;product=transposase;protein_id=WP_002228614.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3164275 3165596 . + . ID=id247;gbkey=repeat_region NC_008149.1 RefSeq gene 3164314 3165522 . - . ID=gene2945;Name=YPN_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14750;old_locus_tag=YPN_2808 NC_008149.1 Protein Homology CDS 3164314 3165522 . - 0 ID=cds2871;Parent=gene2945;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008149.1 RefSeq gene 3165697 3166011 . - . ID=gene2946;Name=YPN_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14755;old_locus_tag=YPN_2809 NC_008149.1 Protein Homology CDS 3165697 3166011 . - 0 ID=cds2872;Parent=gene2946;Dbxref=Genbank:WP_002223532.1;Name=WP_002223532.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223532.1;transl_table=11 NC_008149.1 RefSeq gene 3166095 3166331 . - . ID=gene2947;Name=YPN_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14760 NC_008149.1 Protein Homology CDS 3166095 3166331 . - 0 ID=cds2873;Parent=gene2947;Dbxref=Genbank:WP_002228617.1;Name=WP_002228617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228617.1;transl_table=11 NC_008149.1 RefSeq gene 3166472 3166798 . - . ID=gene2948;Name=YPN_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14765 NC_008149.1 Protein Homology CDS 3166472 3166798 . - 0 ID=cds2874;Parent=gene2948;Dbxref=Genbank:WP_016256670.1;Name=WP_016256670.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016256670.1;transl_table=11 NC_008149.1 RefSeq gene 3166832 3167026 . - . ID=gene2949;Name=YPN_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14770;old_locus_tag=YPN_2811 NC_008149.1 Protein Homology CDS 3166832 3167026 . - 0 ID=cds2875;Parent=gene2949;Dbxref=Genbank:WP_002228620.1;Name=WP_002228620.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228620.1;transl_table=11 NC_008149.1 RefSeq gene 3167555 3167788 . - . ID=gene2950;Name=YPN_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14775;old_locus_tag=YPN_2812 NC_008149.1 Protein Homology CDS 3167555 3167788 . - 0 ID=cds2876;Parent=gene2950;Dbxref=Genbank:WP_002228621.1;Name=WP_002228621.1;gbkey=CDS;product=transposase;protein_id=WP_002228621.1;transl_table=11 NC_008149.1 RefSeq gene 3167844 3168110 . - . ID=gene2951;Name=YPN_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14780;old_locus_tag=YPN_2813 NC_008149.1 Protein Homology CDS 3167844 3168110 . - 0 ID=cds2877;Parent=gene2951;Dbxref=Genbank:WP_002228622.1;Name=WP_002228622.1;gbkey=CDS;product=transposase;protein_id=WP_002228622.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3168178 3169233 . + . ID=id248;gbkey=repeat_region NC_008149.1 RefSeq gene 3168240 3169595 . - . ID=gene2952;Name=YPN_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14785;old_locus_tag=YPN_2814 NC_008149.1 Protein Homology CDS 3168240 3169595 . - 0 ID=cds2878;Parent=gene2952;Dbxref=Genbank:WP_002220152.1;Name=WP_002220152.1;Note=this helicase is not essential cell growth;gbkey=CDS;product=RNA helicase;protein_id=WP_002220152.1;transl_table=11 NC_008149.1 RefSeq gene 3169986 3170696 . + . ID=gene2953;Name=YPN_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14790;old_locus_tag=YPN_2815 NC_008149.1 Protein Homology CDS 3169986 3170696 . + 0 ID=cds2879;Parent=gene2953;Dbxref=Genbank:WP_002220154.1;Name=WP_002220154.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220154.1;transl_table=11 NC_008149.1 RefSeq gene 3170748 3171734 . + . ID=gene2954;Name=YPN_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14795;old_locus_tag=YPN_2816 NC_008149.1 Protein Homology CDS 3170748 3171734 . + 0 ID=cds2880;Parent=gene2954;Dbxref=Genbank:WP_002220156.1;Name=WP_002220156.1;gbkey=CDS;product=transporter;protein_id=WP_002220156.1;transl_table=11 NC_008149.1 RefSeq gene 3171748 3173490 . + . ID=gene2955;Name=YPN_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14800;old_locus_tag=YPN_2817 NC_008149.1 Protein Homology CDS 3171748 3173490 . + 0 ID=cds2881;Parent=gene2955;Dbxref=Genbank:WP_002228623.1;Name=WP_002228623.1;gbkey=CDS;product=multidrug ABC transporter ATP-binding protein;protein_id=WP_002228623.1;transl_table=11 NC_008149.1 RefSeq gene 3173495 3174670 . + . ID=gene2956;Name=YPN_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14805;old_locus_tag=YPN_2818 NC_008149.1 Protein Homology CDS 3173495 3174670 . + 0 ID=cds2882;Parent=gene2956;Dbxref=Genbank:WP_002220159.1;Name=WP_002220159.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220159.1;transl_table=11 NC_008149.1 RefSeq gene 3174683 3175789 . + . ID=gene2957;Name=YPN_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14810;old_locus_tag=YPN_2819 NC_008149.1 Protein Homology CDS 3174683 3175789 . + 0 ID=cds2883;Parent=gene2957;Dbxref=Genbank:WP_002220162.1;Name=WP_002220162.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220162.1;transl_table=11 NC_008149.1 RefSeq gene 3175828 3176154 . - . ID=gene2958;Name=YPN_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14815;old_locus_tag=YPN_2820 NC_008149.1 Protein Homology CDS 3175828 3176154 . - 0 ID=cds2884;Parent=gene2958;Dbxref=Genbank:WP_002220163.1;Name=WP_002220163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002220163.1;transl_table=11 NC_008149.1 RefSeq gene 3176165 3176392 . - . ID=gene2959;Name=YPN_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14820;old_locus_tag=YPN_2821 NC_008149.1 Protein Homology CDS 3176165 3176392 . - 0 ID=cds2885;Parent=gene2959;Dbxref=Genbank:WP_002220165.1;Name=WP_002220165.1;gbkey=CDS;product=N5%2CN10-methylene tetrahydromethanopterin reductase;protein_id=WP_002220165.1;transl_table=11 NC_008149.1 RefSeq gene 3176947 3177858 . + . ID=gene2960;Name=YPN_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14825;old_locus_tag=YPN_2822 NC_008149.1 Protein Homology CDS 3176947 3177858 . + 0 ID=cds2886;Parent=gene2960;Dbxref=Genbank:WP_002220168.1;Name=WP_002220168.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002220168.1;transl_table=11 NC_008149.1 RefSeq gene 3177859 3178968 . - . ID=gene2961;Name=YPN_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14830;old_locus_tag=YPN_2823 NC_008149.1 Protein Homology CDS 3177859 3178968 . - 0 ID=cds2887;Parent=gene2961;Dbxref=Genbank:WP_002220169.1;Name=WP_002220169.1;gbkey=CDS;product=NADH:flavin oxidoreductase;protein_id=WP_002220169.1;transl_table=11 NC_008149.1 RefSeq gene 3179316 3180680 . - . ID=gene2962;Name=YPN_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14835;old_locus_tag=YPN_2824 NC_008149.1 Protein Homology CDS 3179316 3180680 . - 0 ID=cds2888;Parent=gene2962;Dbxref=Genbank:WP_002220170.1;Name=WP_002220170.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC;protein_id=WP_002220170.1;transl_table=11 NC_008149.1 RefSeq gene 3180667 3182481 . - . ID=gene2963;Name=YPN_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14840;old_locus_tag=YPN_2825 NC_008149.1 Protein Homology CDS 3180667 3182481 . - 0 ID=cds2889;Parent=gene2963;Dbxref=Genbank:WP_002220171.1;Name=WP_002220171.1;gbkey=CDS;product=sensor protein ZraS;protein_id=WP_002220171.1;transl_table=11 NC_008149.1 RefSeq gene 3182839 3183312 . + . ID=gene2964;Name=YPN_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14845;old_locus_tag=YPN_2826 NC_008149.1 Protein Homology CDS 3182839 3183312 . + 0 ID=cds2890;Parent=gene2964;Dbxref=Genbank:WP_002220173.1;Name=WP_002220173.1;gbkey=CDS;product=zinc resistance protein;protein_id=WP_002220173.1;transl_table=11 NC_008149.1 RefSeq gene 3183400 3184017 . - . ID=gene2965;Name=YPN_RS14850;end_range=3184017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS14850;old_locus_tag=YPN_2827;partial=true;pseudo=true NC_008149.1 Protein Homology CDS 3183400 3184017 . - 0 ID=cds2891;Parent=gene2965;end_range=3184017,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;transl_table=11 NC_008149.1 RefSeq repeat_region 3184006 3184727 . + . ID=id249;gbkey=repeat_region NC_008149.1 RefSeq gene 3184118 3184576 . - . ID=gene2966;Name=YPN_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14855;old_locus_tag=YPN_2828 NC_008149.1 Protein Homology CDS 3184118 3184576 . - 0 ID=cds2892;Parent=gene2966;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 3184722 3185366 . - . ID=gene2967;Name=YPN_RS14860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS14860;old_locus_tag=YPN_2829;partial=true;pseudo=true;start_range=.,3184722 NC_008149.1 Protein Homology CDS 3184722 3185366 . - 0 ID=cds2893;Parent=gene2967;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=nucleoside permease;pseudo=true;start_range=.,3184722;transl_table=11 NC_008149.1 RefSeq gene 3185505 3186368 . - . ID=gene2968;Name=YPN_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14865;old_locus_tag=YPN_2830 NC_008149.1 Protein Homology CDS 3185505 3186368 . - 0 ID=cds2894;Parent=gene2968;Dbxref=Genbank:WP_002214195.1;Name=WP_002214195.1;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=WP_002214195.1;transl_table=11 NC_008149.1 RefSeq gene 3186714 3187562 . + . ID=gene2969;Name=YPN_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14870;old_locus_tag=YPN_2831 NC_008149.1 Protein Homology CDS 3186714 3187562 . + 0 ID=cds2895;Parent=gene2969;Dbxref=Genbank:WP_002214197.1;Name=WP_002214197.1;gbkey=CDS;product=multidrug DMT transporter;protein_id=WP_002214197.1;transl_table=11 NC_008149.1 RefSeq gene 3187600 3188493 . - . ID=gene2970;Name=YPN_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14875;old_locus_tag=YPN_2832 NC_008149.1 Protein Homology CDS 3187600 3188493 . - 0 ID=cds2896;Parent=gene2970;Dbxref=Genbank:WP_002214199.1;Name=WP_002214199.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214199.1;transl_table=11 NC_008149.1 RefSeq gene 3188725 3190773 . - . ID=gene2971;Name=YPN_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14880;old_locus_tag=YPN_2833 NC_008149.1 Protein Homology CDS 3188725 3190773 . - 0 ID=cds2897;Parent=gene2971;Dbxref=Genbank:WP_002228035.1;Name=WP_002228035.1;Note=proton-motive-force-driven choline transporter;gbkey=CDS;product=choline transporter BetT;protein_id=WP_002228035.1;transl_table=11 NC_008149.1 RefSeq gene 3191138 3191734 . + . ID=gene2972;Name=YPN_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14885;old_locus_tag=YPN_2834 NC_008149.1 Protein Homology CDS 3191138 3191734 . + 0 ID=cds2898;Parent=gene2972;Dbxref=Genbank:WP_002218278.1;Name=WP_002218278.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002218278.1;transl_table=11 NC_008149.1 RefSeq gene 3191792 3193264 . + . ID=gene2973;Name=YPN_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14890;old_locus_tag=YPN_2835 NC_008149.1 Protein Homology CDS 3191792 3193264 . + 0 ID=cds2899;Parent=gene2973;Dbxref=Genbank:WP_002218281.1;Name=WP_002218281.1;gbkey=CDS;product=NAD/NADP-dependent betaine aldehyde dehydrogenase;protein_id=WP_002218281.1;transl_table=11 NC_008149.1 RefSeq gene 3193287 3194990 . + . ID=gene2974;Name=YPN_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14895;old_locus_tag=YPN_2836 NC_008149.1 Protein Homology CDS 3193287 3194990 . + 0 ID=cds2900;Parent=gene2974;Dbxref=Genbank:WP_002220180.1;Name=WP_002220180.1;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;gbkey=CDS;product=oxygen-dependent choline dehydrogenase;protein_id=WP_002220180.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3195107 3195830 . + . ID=id250;gbkey=repeat_region NC_008149.1 RefSeq gene 3195219 3195677 . - . ID=gene2975;Name=YPN_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14900;old_locus_tag=YPN_2837 NC_008149.1 Protein Homology CDS 3195219 3195677 . - 0 ID=cds2901;Parent=gene2975;Dbxref=Genbank:WP_011566203.1;Name=WP_011566203.1;gbkey=CDS;product=transposase;protein_id=WP_011566203.1;transl_table=11 NC_008149.1 RefSeq gene 3195667 3195837 . - . ID=gene2976;Name=YPN_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14905 NC_008149.1 Protein Homology CDS 3195667 3195837 . - 0 ID=cds2902;Parent=gene2976;Dbxref=Genbank:WP_025470755.1;Name=WP_025470755.1;gbkey=CDS;product=transposase;protein_id=WP_025470755.1;transl_table=11 NC_008149.1 RefSeq gene 3195912 3196622 . - . ID=gene2977;Name=YPN_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14910;old_locus_tag=YPN_2838 NC_008149.1 Protein Homology CDS 3195912 3196622 . - 0 ID=cds2903;Parent=gene2977;Dbxref=Genbank:WP_002210775.1;Name=WP_002210775.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210775.1;transl_table=11 NC_008149.1 RefSeq gene 3196765 3197217 . - . ID=gene2978;Name=YPN_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14915;old_locus_tag=YPN_2839 NC_008149.1 Protein Homology CDS 3196765 3197217 . - 0 ID=cds2904;Parent=gene2978;Dbxref=Genbank:WP_002210774.1;Name=WP_002210774.1;gbkey=CDS;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=WP_002210774.1;transl_table=11 NC_008149.1 RefSeq gene 3197220 3197465 . - . ID=gene2979;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=YPN_RS14920;old_locus_tag=YPN_2840 NC_008149.1 Protein Homology CDS 3197220 3197465 . - 0 ID=cds2905;Parent=gene2979;Dbxref=Genbank:WP_002210773.1;Name=WP_002210773.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=WP_002210773.1;transl_table=11 NC_008149.1 RefSeq gene 3197462 3197941 . - . ID=gene2980;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=YPN_RS14925;old_locus_tag=YPN_2841 NC_008149.1 Protein Homology CDS 3197462 3197941 . - 0 ID=cds2906;Parent=gene2980;Dbxref=Genbank:WP_002210772.1;Name=WP_002210772.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=WP_002210772.1;transl_table=11 NC_008149.1 RefSeq gene 3198042 3199022 . - . ID=gene2981;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=YPN_RS14930;old_locus_tag=YPN_2842 NC_008149.1 Protein Homology CDS 3198042 3199022 . - 0 ID=cds2907;Parent=gene2981;Dbxref=Genbank:WP_002210771.1;Name=WP_002210771.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;product=cyclic pyranopterin monophosphate synthase;protein_id=WP_002210771.1;transl_table=11 NC_008149.1 RefSeq gene 3199274 3199420 . + . ID=gene2982;Name=YPN_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14935 NC_008149.1 Protein Homology CDS 3199274 3199420 . + 0 ID=cds2908;Parent=gene2982;Dbxref=Genbank:WP_002210770.1;Name=WP_002210770.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210770.1;transl_table=11 NC_008149.1 RefSeq gene 3199554 3200477 . + . ID=gene2983;Name=YPN_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14940;old_locus_tag=YPN_2843 NC_008149.1 Protein Homology CDS 3199554 3200477 . + 0 ID=cds2909;Parent=gene2983;Dbxref=Genbank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210769.1;transl_table=11 NC_008149.1 RefSeq gene 3200608 3200853 . - . ID=gene2984;Name=YPN_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14945;old_locus_tag=YPN_2844 NC_008149.1 Protein Homology CDS 3200608 3200853 . - 0 ID=cds2910;Parent=gene2984;Dbxref=Genbank:WP_002210768.1;Name=WP_002210768.1;gbkey=CDS;product=transporter;protein_id=WP_002210768.1;transl_table=11 NC_008149.1 RefSeq gene 3201145 3203160 . - . ID=gene2985;Name=YPN_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14950;old_locus_tag=YPN_2845 NC_008149.1 Protein Homology CDS 3201145 3203160 . - 0 ID=cds2911;Parent=gene2985;Dbxref=Genbank:WP_002210767.1;Name=WP_002210767.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;product=UvrABC system protein B;protein_id=WP_002210767.1;transl_table=11 NC_008149.1 RefSeq gene 3204250 3204960 . + . ID=gene2986;Name=YPN_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14955;old_locus_tag=YPN_2846 NC_008149.1 Protein Homology CDS 3204250 3204960 . + 0 ID=cds2912;Parent=gene2986;Dbxref=Genbank:WP_002210766.1;Name=WP_002210766.1;gbkey=CDS;product=amino acid transporter;protein_id=WP_002210766.1;transl_table=11 NC_008149.1 RefSeq gene 3205093 3205815 . - . ID=gene2987;Name=YPN_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14960;old_locus_tag=YPN_2847 NC_008149.1 Protein Homology CDS 3205093 3205815 . - 0 ID=cds2913;Parent=gene2987;Dbxref=Genbank:WP_002216554.1;Name=WP_002216554.1;gbkey=CDS;product=dithiobiotin synthetase;protein_id=WP_002216554.1;transl_table=11 NC_008149.1 RefSeq gene 3205808 3206611 . - . ID=gene2988;Name=YPN_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14965;old_locus_tag=YPN_2848 NC_008149.1 Protein Homology CDS 3205808 3206611 . - 0 ID=cds2914;Parent=gene2988;Dbxref=Genbank:WP_002210764.1;Name=WP_002210764.1;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;gbkey=CDS;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=WP_002210764.1;transl_table=11 NC_008149.1 RefSeq gene 3206595 3207746 . - . ID=gene2989;Name=YPN_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14970;old_locus_tag=YPN_2849 NC_008149.1 Protein Homology CDS 3206595 3207746 . - 0 ID=cds2915;Parent=gene2989;Dbxref=Genbank:WP_002210763.1;Name=WP_002210763.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=WP_002210763.1;transl_table=11 NC_008149.1 RefSeq gene 3207746 3208783 . - . ID=gene2990;Name=YPN_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14975;old_locus_tag=YPN_2850 NC_008149.1 Protein Homology CDS 3207746 3208783 . - 0 ID=cds2916;Parent=gene2990;Dbxref=Genbank:WP_002210762.1;Name=WP_002210762.1;Note=catalyzes the formation of biotin from dethiobiotin;gbkey=CDS;product=biotin synthase;protein_id=WP_002210762.1;transl_table=11 NC_008149.1 RefSeq gene 3208882 3210162 . + . ID=gene2991;Name=YPN_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14980;old_locus_tag=YPN_2851 NC_008149.1 Protein Homology CDS 3208882 3210162 . + 0 ID=cds2917;Parent=gene2991;Dbxref=Genbank:WP_002220188.1;Name=WP_002220188.1;gbkey=CDS;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=WP_002220188.1;transl_table=11 NC_008149.1 RefSeq gene 3210347 3211351 . - . ID=gene2992;Name=YPN_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14985;old_locus_tag=YPN_2852 NC_008149.1 Protein Homology CDS 3210347 3211351 . - 0 ID=cds2918;Parent=gene2992;Dbxref=Genbank:WP_002210760.1;Name=WP_002210760.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_002210760.1;transl_table=11 NC_008149.1 RefSeq gene 3211642 3212463 . + . ID=gene2993;Name=YPN_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS14990;old_locus_tag=YPN_2853 NC_008149.1 Protein Homology CDS 3211642 3212463 . + 0 ID=cds2919;Parent=gene2993;Dbxref=Genbank:WP_002210759.1;Name=WP_002210759.1;gbkey=CDS;product=pyridoxal phosphate phosphatase;protein_id=WP_002210759.1;transl_table=11 NC_008149.1 RefSeq gene 3212519 3213598 . - . ID=gene2994;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=YPN_RS14995;old_locus_tag=YPN_2854 NC_008149.1 Protein Homology CDS 3212519 3213598 . - 0 ID=cds2920;Parent=gene2994;Dbxref=Genbank:WP_002210758.1;Name=WP_002210758.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdenum import ATP-binding protein ModC;protein_id=WP_002210758.1;transl_table=11 NC_008149.1 RefSeq gene 3213592 3214287 . - . ID=gene2995;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=YPN_RS15000;old_locus_tag=YPN_2855 NC_008149.1 Protein Homology CDS 3213592 3214287 . - 0 ID=cds2921;Parent=gene2995;Dbxref=Genbank:WP_002210757.1;Name=WP_002210757.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=WP_002210757.1;transl_table=11 NC_008149.1 RefSeq gene 3214287 3215066 . - . ID=gene2996;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=YPN_RS15005;old_locus_tag=YPN_2856 NC_008149.1 Protein Homology CDS 3214287 3215066 . - 0 ID=cds2922;Parent=gene2996;Dbxref=Genbank:WP_002210756.1;Name=WP_002210756.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11 NC_008149.1 RefSeq gene 3215301 3215453 . - . ID=gene2997;Name=YPN_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15010;old_locus_tag=YPN_2857 NC_008149.1 Protein Homology CDS 3215301 3215453 . - 0 ID=cds2923;Parent=gene2997;Dbxref=Genbank:WP_002217291.1;Name=WP_002217291.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217291.1;transl_table=11 NC_008149.1 RefSeq gene 3215736 3216527 . + . ID=gene2998;Name=YPN_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15015;old_locus_tag=YPN_2858 NC_008149.1 Protein Homology CDS 3215736 3216527 . + 0 ID=cds2924;Parent=gene2998;Dbxref=Genbank:WP_002210754.1;Name=WP_002210754.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;product=transcriptional regulator ModE;protein_id=WP_002210754.1;transl_table=11 NC_008149.1 RefSeq gene 3216637 3218127 . + . ID=gene2999;Name=YPN_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15020;old_locus_tag=YPN_2859 NC_008149.1 Protein Homology CDS 3216637 3218127 . + 0 ID=cds2925;Parent=gene2999;Dbxref=Genbank:WP_002210753.1;Name=WP_002210753.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;product=molybdenum ABC transporter ATP-binding protein;protein_id=WP_002210753.1;transl_table=11 NC_008149.1 RefSeq gene 3218161 3218289 . + . ID=gene3000;Name=YPN_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15025 NC_008149.1 Protein Homology CDS 3218161 3218289 . + 0 ID=cds2926;Parent=gene3000;Dbxref=Genbank:WP_002210752.1;Name=WP_002210752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210752.1;transl_table=11 NC_008149.1 RefSeq gene 3218344 3219162 . + . ID=gene3001;Name=YPN_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15030;old_locus_tag=YPN_2860 NC_008149.1 Protein Homology CDS 3218344 3219162 . + 0 ID=cds2927;Parent=gene3001;Dbxref=Genbank:WP_002210751.1;Name=WP_002210751.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002210751.1;transl_table=11 NC_008149.1 RefSeq gene 3219522 3220538 . + . ID=gene3002;Name=YPN_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15035;old_locus_tag=YPN_2861 NC_008149.1 Protein Homology CDS 3219522 3220538 . + 0 ID=cds2928;Parent=gene3002;Dbxref=Genbank:WP_002210750.1;Name=WP_002210750.1;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=WP_002210750.1;transl_table=11 NC_008149.1 RefSeq gene 3220548 3221600 . + . ID=gene3003;Name=YPN_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15040;old_locus_tag=YPN_2862 NC_008149.1 Protein Homology CDS 3220548 3221600 . + 0 ID=cds2929;Parent=gene3003;Dbxref=Genbank:WP_002210749.1;Name=WP_002210749.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002210749.1;transl_table=11 NC_008149.1 RefSeq gene 3221597 3222748 . + . ID=gene3004;Name=YPN_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15045;old_locus_tag=YPN_2863 NC_008149.1 Protein Homology CDS 3221597 3222748 . + 0 ID=cds2930;Parent=gene3004;Dbxref=Genbank:WP_002210748.1;Name=WP_002210748.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;product=galactokinase;protein_id=WP_002210748.1;transl_table=11 NC_008149.1 RefSeq gene 3222742 3222894 . + . ID=gene3005;Name=YPN_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15050;old_locus_tag=YPN_2864 NC_008149.1 Protein Homology CDS 3222742 3222894 . + 0 ID=cds2931;Parent=gene3005;Dbxref=Genbank:WP_002216814.1;Name=WP_002216814.1;gbkey=CDS;product=aldose 1-epimerase;protein_id=WP_002216814.1;transl_table=11 NC_008149.1 RefSeq gene 3222915 3223811 . + . ID=gene3006;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=YPN_RS15055;old_locus_tag=YPN_2865 NC_008149.1 Protein Homology CDS 3222915 3223811 . + 0 ID=cds2932;Parent=gene3006;Dbxref=Genbank:WP_002216812.1;Name=WP_002216812.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;product=galactose-1-epimerase;protein_id=WP_002216812.1;transl_table=11 NC_008149.1 RefSeq gene 3224104 3224439 . + . ID=gene3007;Name=YPN_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15060;old_locus_tag=YPN_2866 NC_008149.1 Protein Homology CDS 3224104 3224439 . + 0 ID=cds2933;Parent=gene3007;Dbxref=Genbank:WP_002210747.1;Name=WP_002210747.1;gbkey=CDS;product=phosphate-starvation-inducible protein PsiF;protein_id=WP_002210747.1;transl_table=11 NC_008149.1 RefSeq gene 3224786 3225538 . + . ID=gene3008;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=YPN_RS15065;old_locus_tag=YPN_2867 NC_008149.1 Protein Homology CDS 3224786 3225538 . + 0 ID=cds2934;Parent=gene3008;Dbxref=Genbank:WP_002210746.1;Name=WP_002210746.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002210746.1;transl_table=11 NC_008149.1 RefSeq gene 3225720 3226772 . - . ID=gene3009;Name=YPN_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15070;old_locus_tag=YPN_2868 NC_008149.1 Protein Homology CDS 3225720 3226772 . - 0 ID=cds2935;Parent=gene3009;Dbxref=Genbank:WP_002223549.1;Name=WP_002223549.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=WP_002223549.1;transl_table=11 NC_008149.1 RefSeq gene 3227221 3228159 . + . ID=gene3010;Name=YPN_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15075;old_locus_tag=YPN_2869 NC_008149.1 Protein Homology CDS 3227221 3228159 . + 0 ID=cds2936;Parent=gene3010;Dbxref=Genbank:WP_002210743.1;Name=WP_002210743.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;product=zinc transporter ZitB;protein_id=WP_002210743.1;transl_table=11 NC_008149.1 RefSeq gene 3228274 3228999 . - . ID=gene3011;Name=YPN_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15080;old_locus_tag=YPN_2870 NC_008149.1 Protein Homology CDS 3228274 3228999 . - 0 ID=cds2937;Parent=gene3011;Dbxref=Genbank:WP_002210742.1;Name=WP_002210742.1;Note=involved in nicotinamide riboside transport;gbkey=CDS;product=nicotinamide riboside transporter PnuC;protein_id=WP_002210742.1;transl_table=11 NC_008149.1 RefSeq gene 3229121 3230182 . - . ID=gene3012;Name=YPN_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15085;old_locus_tag=YPN_2871 NC_008149.1 Protein Homology CDS 3229121 3230182 . - 0 ID=cds2938;Parent=gene3012;Dbxref=Genbank:WP_002228627.1;Name=WP_002228627.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthase A;protein_id=WP_002228627.1;transl_table=11 NC_008149.1 RefSeq gene 3230259 3230501 . + . ID=gene3013;Name=YPN_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15090 NC_008149.1 Protein Homology CDS 3230259 3230501 . + 0 ID=cds2939;Parent=gene3013;Dbxref=Genbank:WP_002217022.1;Name=WP_002217022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217022.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3230564 3230827 . + . ID=id251;gbkey=repeat_region NC_008149.1 RefSeq gene 3230649 3230724 . - . ID=gene3014;Name=YPN_RS15095;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS15095;old_locus_tag=YPN_r082 NC_008149.1 tRNAscan-SE tRNA 3230649 3230724 . - . ID=rna70;Parent=gene3014;anticodon=(pos:complement(3230689..3230691));gbkey=tRNA;product=tRNA-Lys NC_008149.1 tRNAscan-SE exon 3230649 3230724 . - . ID=id252;Parent=rna70;anticodon=(pos:complement(3230689..3230691));gbkey=tRNA;product=tRNA-Lys NC_008149.1 RefSeq gene 3230752 3230827 . - . ID=gene3015;Name=YPN_RS15100;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS15100;old_locus_tag=YPN_r083 NC_008149.1 tRNAscan-SE tRNA 3230752 3230827 . - . ID=rna71;Parent=gene3015;anticodon=(pos:complement(3230792..3230794));gbkey=tRNA;product=tRNA-Lys NC_008149.1 tRNAscan-SE exon 3230752 3230827 . - . ID=id253;Parent=rna71;anticodon=(pos:complement(3230792..3230794));gbkey=tRNA;product=tRNA-Lys NC_008149.1 RefSeq gene 3231018 3231827 . - . ID=gene3016;Name=YPN_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15105;old_locus_tag=YPN_2872 NC_008149.1 Protein Homology CDS 3231018 3231827 . - 0 ID=cds2940;Parent=gene3016;Dbxref=Genbank:WP_002220051.1;Name=WP_002220051.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;product=tol-pal system protein YbgF;protein_id=WP_002220051.1;transl_table=11 NC_008149.1 RefSeq gene 3231837 3232343 . - . ID=gene3017;Name=YPN_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15110;old_locus_tag=YPN_2873 NC_008149.1 Protein Homology CDS 3231837 3232343 . - 0 ID=cds2941;Parent=gene3017;Dbxref=Genbank:WP_002210739.1;Name=WP_002210739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210739.1;transl_table=11 NC_008149.1 RefSeq gene 3232394 3233686 . - . ID=gene3018;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=YPN_RS15115;old_locus_tag=YPN_2874 NC_008149.1 Protein Homology CDS 3232394 3233686 . - 0 ID=cds2942;Parent=gene3018;Dbxref=Genbank:WP_002210738.1;Name=WP_002210738.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=protein TolB;protein_id=WP_002210738.1;transl_table=11 NC_008149.1 RefSeq gene 3233806 3234972 . - . ID=gene3019;Name=YPN_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15120;old_locus_tag=YPN_2875 NC_008149.1 Protein Homology CDS 3233806 3234972 . - 0 ID=cds2943;Parent=gene3019;Dbxref=Genbank:WP_002210737.1;Name=WP_002210737.1;gbkey=CDS;product=cell envelope integrity/translocation protein TolA;protein_id=WP_002210737.1;transl_table=11 NC_008149.1 RefSeq gene 3235084 3235512 . - . ID=gene3020;Name=YPN_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15125;old_locus_tag=YPN_2876 NC_008149.1 Protein Homology CDS 3235084 3235512 . - 0 ID=cds2944;Parent=gene3020;Dbxref=Genbank:WP_002210736.1;Name=WP_002210736.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210736.1;transl_table=11 NC_008149.1 RefSeq gene 3235525 3236211 . - . ID=gene3021;Name=YPN_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15130;old_locus_tag=YPN_2877 NC_008149.1 Protein Homology CDS 3235525 3236211 . - 0 ID=cds2945;Parent=gene3021;Dbxref=Genbank:WP_002210735.1;Name=WP_002210735.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;product=colicin transporter;protein_id=WP_002210735.1;transl_table=11 NC_008149.1 RefSeq gene 3236211 3236612 . - . ID=gene3022;Name=YPN_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15135;old_locus_tag=YPN_2878 NC_008149.1 Protein Homology CDS 3236211 3236612 . - 0 ID=cds2946;Parent=gene3022;Dbxref=Genbank:WP_002210734.1;Name=WP_002210734.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=WP_002210734.1;transl_table=11 NC_008149.1 RefSeq gene 3236744 3237031 . - . ID=gene3023;Name=YPN_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15140;old_locus_tag=YPN_2879 NC_008149.1 Protein Homology CDS 3236744 3237031 . - 0 ID=cds2947;Parent=gene3023;Dbxref=Genbank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011191945.1;transl_table=11 NC_008149.1 RefSeq gene 3237021 3237155 . - . ID=gene3024;Name=YPN_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15145 NC_008149.1 Protein Homology CDS 3237021 3237155 . - 0 ID=cds2948;Parent=gene3024;Dbxref=Genbank:WP_002210732.1;Name=WP_002210732.1;gbkey=CDS;product=cyd operon protein YbgT;protein_id=WP_002210732.1;transl_table=11 NC_008149.1 RefSeq gene 3237168 3238307 . - . ID=gene3025;Name=YPN_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15150;old_locus_tag=YPN_2880 NC_008149.1 Protein Homology CDS 3237168 3238307 . - 0 ID=cds2949;Parent=gene3025;Dbxref=Genbank:WP_002210731.1;Name=WP_002210731.1;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit II;protein_id=WP_002210731.1;transl_table=11 NC_008149.1 RefSeq gene 3238322 3239890 . - . ID=gene3026;Name=YPN_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15155;old_locus_tag=YPN_2881 NC_008149.1 Protein Homology CDS 3238322 3239890 . - 0 ID=cds2950;Parent=gene3026;Dbxref=Genbank:WP_002210730.1;Name=WP_002210730.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;product=cytochrome D ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11 NC_008149.1 RefSeq gene 3240656 3241528 . - . ID=gene3027;Name=YPN_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15160;old_locus_tag=YPN_2882 NC_008149.1 Protein Homology CDS 3240656 3241528 . - 0 ID=cds2951;Parent=gene3027;Dbxref=Genbank:WP_002210729.1;Name=WP_002210729.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=WP_002210729.1;transl_table=11 NC_008149.1 RefSeq gene 3241528 3242694 . - . ID=gene3028;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=YPN_RS15165;old_locus_tag=YPN_2883 NC_008149.1 Protein Homology CDS 3241528 3242694 . - 0 ID=cds2952;Parent=gene3028;Dbxref=Genbank:WP_002210728.1;Name=WP_002210728.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11 NC_008149.1 RefSeq gene 3242807 3244030 . - . ID=gene3029;Name=YPN_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15170;old_locus_tag=YPN_2884 NC_008149.1 Protein Homology CDS 3242807 3244030 . - 0 ID=cds2953;Parent=gene3029;Dbxref=Genbank:WP_002210727.1;Name=WP_002210727.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=WP_002210727.1;transl_table=11 NC_008149.1 RefSeq gene 3244060 3246867 . - . ID=gene3030;Name=YPN_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15175;old_locus_tag=YPN_2885 NC_008149.1 Protein Homology CDS 3244060 3246867 . - 0 ID=cds2954;Parent=gene3030;Dbxref=Genbank:WP_002210726.1;Name=WP_002210726.1;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1;protein_id=WP_002210726.1;transl_table=11 NC_008149.1 RefSeq gene 3247223 3247939 . - . ID=gene3031;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=YPN_RS15180;old_locus_tag=YPN_2886 NC_008149.1 Protein Homology CDS 3247223 3247939 . - 0 ID=cds2955;Parent=gene3031;Dbxref=Genbank:WP_002210725.1;Name=WP_002210725.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11 NC_008149.1 RefSeq gene 3247989 3249755 . - . ID=gene3032;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=YPN_RS15185;old_locus_tag=YPN_2887 NC_008149.1 Protein Homology CDS 3247989 3249755 . - 0 ID=cds2956;Parent=gene3032;Dbxref=Genbank:WP_002210724.1;Name=WP_002210724.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11 NC_008149.1 RefSeq gene 3249756 3250103 . - . ID=gene3033;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=YPN_RS15190;old_locus_tag=YPN_2888 NC_008149.1 Protein Homology CDS 3249756 3250103 . - 0 ID=cds2957;Parent=gene3033;Dbxref=Genbank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=WP_002210723.1;transl_table=11 NC_008149.1 RefSeq gene 3250097 3250486 . - . ID=gene3034;Name=YPN_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15195;old_locus_tag=YPN_2889 NC_008149.1 Protein Homology CDS 3250097 3250486 . - 0 ID=cds2958;Parent=gene3034;Dbxref=Genbank:WP_002210722.1;Name=WP_002210722.1;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=WP_002210722.1;transl_table=11 NC_008149.1 RefSeq gene 3251196 3252476 . + . ID=gene3035;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=YPN_RS15200;old_locus_tag=YPN_2890 NC_008149.1 Protein Homology CDS 3251196 3252476 . + 0 ID=cds2959;Parent=gene3035;Dbxref=Genbank:WP_002210721.1;Name=WP_002210721.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=WP_002210721.1;transl_table=11 NC_008149.1 RefSeq gene 3252584 3253162 . - . ID=gene3036;Name=YPN_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15205;old_locus_tag=YPN_2891 NC_008149.1 Protein Homology CDS 3252584 3253162 . - 0 ID=cds2960;Parent=gene3036;Dbxref=Genbank:WP_002210720.1;Name=WP_002210720.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=protein GrpE;protein_id=WP_002210720.1;transl_table=11 NC_008149.1 RefSeq gene 3253286 3254167 . + . ID=gene3037;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=YPN_RS15210;old_locus_tag=YPN_2892 NC_008149.1 Protein Homology CDS 3253286 3254167 . + 0 ID=cds2961;Parent=gene3037;Dbxref=Genbank:WP_002210719.1;Name=WP_002210719.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=NAD kinase;protein_id=WP_002210719.1;transl_table=11 NC_008149.1 RefSeq gene 3254254 3255915 . + . ID=gene3038;Name=YPN_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15215;old_locus_tag=YPN_2893 NC_008149.1 Protein Homology CDS 3254254 3255915 . + 0 ID=cds2962;Parent=gene3038;Dbxref=Genbank:WP_002210718.1;Name=WP_002210718.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=WP_002210718.1;transl_table=11 NC_008149.1 RefSeq gene 3256029 3256370 . + . ID=gene3039;Name=YPN_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15220;old_locus_tag=YPN_2894 NC_008149.1 Protein Homology CDS 3256029 3256370 . + 0 ID=cds2963;Parent=gene3039;Dbxref=Genbank:WP_002210717.1;Name=WP_002210717.1;gbkey=CDS;product=outer membrane biogenesis protein BamE;protein_id=WP_002210717.1;transl_table=11 NC_008149.1 RefSeq gene 3256520 3256804 . - . ID=gene3040;Name=YPN_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15225;old_locus_tag=YPN_2895 NC_008149.1 Protein Homology CDS 3256520 3256804 . - 0 ID=cds2964;Parent=gene3040;Dbxref=Genbank:WP_002210716.1;Name=WP_002210716.1;gbkey=CDS;product=protein RnfH;protein_id=WP_002210716.1;transl_table=11 NC_008149.1 RefSeq gene 3256797 3257231 . - . ID=gene3041;Name=YPN_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15230;old_locus_tag=YPN_2896 NC_008149.1 Protein Homology CDS 3256797 3257231 . - 0 ID=cds2965;Parent=gene3041;Dbxref=Genbank:WP_002210715.1;Name=WP_002210715.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210715.1;transl_table=11 NC_008149.1 RefSeq gene 3257392 3257874 . + . ID=gene3042;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=YPN_RS15235;old_locus_tag=YPN_2897 NC_008149.1 Protein Homology CDS 3257392 3257874 . + 0 ID=cds2966;Parent=gene3042;Dbxref=Genbank:WP_002210714.1;Name=WP_002210714.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=WP_002210714.1;transl_table=11 NC_008149.1 RefSeq gene 3258319 3258519 . + . ID=gene3043;Name=YPN_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15240 NC_008149.1 Protein Homology CDS 3258319 3258519 . + 0 ID=cds2967;Parent=gene3043;Dbxref=Genbank:WP_002215944.1;Name=WP_002215944.1;gbkey=CDS;product=invasin;protein_id=WP_002215944.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3258357 3259079 . + . ID=id254;gbkey=repeat_region NC_008149.1 RefSeq gene 3258509 3258967 . + . ID=gene3044;Name=YPN_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15245;old_locus_tag=YPN_2898 NC_008149.1 Protein Homology CDS 3258509 3258967 . + 0 ID=cds2968;Parent=gene3044;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 3259191 3260390 . + . ID=gene3045;Name=YPN_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15250;old_locus_tag=YPN_2899 NC_008149.1 Protein Homology CDS 3259191 3260390 . + 0 ID=cds2969;Parent=gene3045;Dbxref=Genbank:WP_002210713.1;Name=WP_002210713.1;gbkey=CDS;product=integrase;protein_id=WP_002210713.1;transl_table=11 NC_008149.1 RefSeq gene 3260469 3261557 . + . ID=gene3046;Name=YPN_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15255;old_locus_tag=YPN_2900 NC_008149.1 Protein Homology CDS 3260469 3261557 . + 0 ID=cds2970;Parent=gene3046;Dbxref=Genbank:WP_002210712.1;Name=WP_002210712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210712.1;transl_table=11 NC_008149.1 RefSeq gene 3261608 3263278 . + . ID=gene3047;Name=YPN_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15260;old_locus_tag=YPN_2901 NC_008149.1 Protein Homology CDS 3261608 3263278 . + 0 ID=cds2971;Parent=gene3047;Dbxref=Genbank:WP_002215945.1;Name=WP_002215945.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215945.1;transl_table=11 NC_008149.1 RefSeq gene 3263440 3263667 . - . ID=gene3048;Name=YPN_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15265;old_locus_tag=YPN_2902 NC_008149.1 Protein Homology CDS 3263440 3263667 . - 0 ID=cds2972;Parent=gene3048;Dbxref=Genbank:WP_002215946.1;Name=WP_002215946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215946.1;transl_table=11 NC_008149.1 RefSeq gene 3263898 3264071 . + . ID=gene3049;Name=YPN_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15270 NC_008149.1 Protein Homology CDS 3263898 3264071 . + 0 ID=cds2973;Parent=gene3049;Dbxref=Genbank:WP_002215947.1;Name=WP_002215947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215947.1;transl_table=11 NC_008149.1 RefSeq gene 3264130 3264453 . + . ID=gene3050;Name=YPN_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15275;old_locus_tag=YPN_2903 NC_008149.1 Protein Homology CDS 3264130 3264453 . + 0 ID=cds2974;Parent=gene3050;Dbxref=Genbank:WP_011566205.1;Name=WP_011566205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011566205.1;transl_table=11 NC_008149.1 RefSeq gene 3264475 3265362 . + . ID=gene3051;Name=YPN_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15280;old_locus_tag=YPN_2904 NC_008149.1 Protein Homology CDS 3264475 3265362 . + 0 ID=cds2975;Parent=gene3051;Dbxref=Genbank:WP_002210710.1;Name=WP_002210710.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210710.1;transl_table=11 NC_008149.1 RefSeq gene 3265355 3265555 . + . ID=gene3052;Name=YPN_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15285;old_locus_tag=YPN_2905 NC_008149.1 Protein Homology CDS 3265355 3265555 . + 0 ID=cds2976;Parent=gene3052;Dbxref=Genbank:WP_002210709.1;Name=WP_002210709.1;gbkey=CDS;product=dipicolinate synthase;protein_id=WP_002210709.1;transl_table=11 NC_008149.1 RefSeq gene 3265555 3266097 . + . ID=gene3053;Name=YPN_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15290;old_locus_tag=YPN_2906 NC_008149.1 Protein Homology CDS 3265555 3266097 . + 0 ID=cds2977;Parent=gene3053;Dbxref=Genbank:WP_002215949.1;Name=WP_002215949.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215949.1;transl_table=11 NC_008149.1 RefSeq gene 3266090 3267049 . + . ID=gene3054;Name=YPN_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15295;old_locus_tag=YPN_2907 NC_008149.1 Protein Homology CDS 3266090 3267049 . + 0 ID=cds2978;Parent=gene3054;Dbxref=Genbank:WP_002215950.1;Name=WP_002215950.1;gbkey=CDS;product=DNA primase;protein_id=WP_002215950.1;transl_table=11 NC_008149.1 RefSeq gene 3267046 3268134 . + . ID=gene3055;Name=YPN_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15300;old_locus_tag=YPN_2908 NC_008149.1 Protein Homology CDS 3267046 3268134 . + 0 ID=cds2979;Parent=gene3055;Dbxref=Genbank:WP_002210707.1;Name=WP_002210707.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210707.1;transl_table=11 NC_008149.1 RefSeq gene 3268483 3268797 . - . ID=gene3056;Name=YPN_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15305;old_locus_tag=YPN_2909 NC_008149.1 Protein Homology CDS 3268483 3268797 . - 0 ID=cds2980;Parent=gene3056;Dbxref=Genbank:WP_002210705.1;Name=WP_002210705.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210705.1;transl_table=11 NC_008149.1 RefSeq gene 3268803 3269120 . - . ID=gene3057;Name=YPN_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15310;old_locus_tag=YPN_2910 NC_008149.1 Protein Homology CDS 3268803 3269120 . - 0 ID=cds2981;Parent=gene3057;Dbxref=Genbank:WP_002215951.1;Name=WP_002215951.1;gbkey=CDS;product=addiction module protein;protein_id=WP_002215951.1;transl_table=11 NC_008149.1 RefSeq gene 3269535 3269711 . + . ID=gene3058;Name=YPN_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15315;old_locus_tag=YPN_2911 NC_008149.1 Protein Homology CDS 3269535 3269711 . + 0 ID=cds2982;Parent=gene3058;Dbxref=Genbank:WP_002210704.1;Name=WP_002210704.1;gbkey=CDS;product=integrase;protein_id=WP_002210704.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3269637 3271595 . + . ID=id255;gbkey=repeat_region NC_008149.1 RefSeq gene 3269725 3270747 . + . ID=gene3059;Name=YPN_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15320;old_locus_tag=YPN_2912 NC_008149.1 Protein Homology CDS 3269725 3270747 . + 0 ID=cds2983;Parent=gene3059;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 3270747 3271526 . + . ID=gene3060;Name=YPN_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15325;old_locus_tag=YPN_2913 NC_008149.1 Protein Homology CDS 3270747 3271526 . + 0 ID=cds2984;Parent=gene3060;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 3271577 3271810 . - . ID=gene3061;Name=YPN_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15330;old_locus_tag=YPN_2914 NC_008149.1 Protein Homology CDS 3271577 3271810 . - 0 ID=cds2985;Parent=gene3061;Dbxref=Genbank:WP_002210703.1;Name=WP_002210703.1;gbkey=CDS;product=polysaccharide deacetylase;protein_id=WP_002210703.1;transl_table=11 NC_008149.1 RefSeq gene 3271803 3271925 . - . ID=gene3062;Name=YPN_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15335 NC_008149.1 Protein Homology CDS 3271803 3271925 . - 0 ID=cds2986;Parent=gene3062;Dbxref=Genbank:WP_002210702.1;Name=WP_002210702.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210702.1;transl_table=11 NC_008149.1 RefSeq gene 3272149 3273633 . + . ID=gene3063;Name=YPN_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15340;old_locus_tag=YPN_2915 NC_008149.1 Protein Homology CDS 3272149 3273633 . + 0 ID=cds2987;Parent=gene3063;Dbxref=Genbank:WP_002210701.1;Name=WP_002210701.1;gbkey=CDS;product=permease;protein_id=WP_002210701.1;transl_table=11 NC_008149.1 RefSeq gene 3273690 3273766 . - . ID=gene3064;Name=YPN_RS15345;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS15345;old_locus_tag=YPN_r085 NC_008149.1 tRNAscan-SE tRNA 3273690 3273766 . - . ID=rna72;Parent=gene3064;anticodon=(pos:complement(3273730..3273732));gbkey=tRNA;product=tRNA-Asp NC_008149.1 tRNAscan-SE exon 3273690 3273766 . - . ID=id256;Parent=rna72;anticodon=(pos:complement(3273730..3273732));gbkey=tRNA;product=tRNA-Asp NC_008149.1 RefSeq gene 3273879 3274643 . - . ID=gene3065;Name=YPN_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15350;old_locus_tag=YPN_2916 NC_008149.1 Protein Homology CDS 3273879 3274643 . - 0 ID=cds2988;Parent=gene3065;Dbxref=Genbank:WP_002210700.1;Name=WP_002210700.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11 NC_008149.1 RefSeq gene 3274713 3275177 . + . ID=gene3066;Name=YPN_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15355;old_locus_tag=YPN_2917 NC_008149.1 Protein Homology CDS 3274713 3275177 . + 0 ID=cds2989;Parent=gene3066;Dbxref=Genbank:WP_002210699.1;Name=WP_002210699.1;gbkey=CDS;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11 NC_008149.1 RefSeq gene 3275232 3275951 . - . ID=gene3067;Name=YPN_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15360;old_locus_tag=YPN_2918 NC_008149.1 Protein Homology CDS 3275232 3275951 . - 0 ID=cds2990;Parent=gene3067;Dbxref=Genbank:WP_002210698.1;Name=WP_002210698.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210698.1;transl_table=11 NC_008149.1 RefSeq gene 3275996 3276751 . + . ID=gene3068;Name=YPN_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15365;old_locus_tag=YPN_2919 NC_008149.1 Protein Homology CDS 3275996 3276751 . + 0 ID=cds2991;Parent=gene3068;Dbxref=Genbank:WP_002210697.1;Name=WP_002210697.1;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_002210697.1;transl_table=11 NC_008149.1 RefSeq gene 3276823 3278211 . + . ID=gene3069;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR,yafG;locus_tag=YPN_RS15370;old_locus_tag=YPN_2920 NC_008149.1 Protein Homology CDS 3276823 3278211 . + 0 ID=cds2992;Parent=gene3069;Dbxref=Genbank:WP_002228041.1;Name=WP_002228041.1;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;gbkey=CDS;gene=mltD;product=murein transglycosylase;protein_id=WP_002228041.1;transl_table=11 NC_008149.1 RefSeq gene 3278253 3279014 . - . ID=gene3070;Name=YPN_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15375;old_locus_tag=YPN_2921 NC_008149.1 Protein Homology CDS 3278253 3279014 . - 0 ID=cds2993;Parent=gene3070;Dbxref=Genbank:WP_002210695.1;Name=WP_002210695.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210695.1;transl_table=11 NC_008149.1 RefSeq gene 3279396 3279842 . - . ID=gene3071;Name=YPN_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15380;old_locus_tag=YPN_2922 NC_008149.1 Protein Homology CDS 3279396 3279842 . - 0 ID=cds2994;Parent=gene3071;Dbxref=Genbank:WP_002210694.1;Name=WP_002210694.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210694.1;transl_table=11 NC_008149.1 RefSeq gene 3279895 3280698 . - . ID=gene3072;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=YPN_RS15385;old_locus_tag=YPN_2923 NC_008149.1 Protein Homology CDS 3279895 3280698 . - 0 ID=cds2995;Parent=gene3072;Dbxref=Genbank:WP_002210693.1;Name=WP_002210693.1;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconic acid reductase B;protein_id=WP_002210693.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3281056 3286673 . + . ID=id257;gbkey=repeat_region NC_008149.1 RefSeq gene 3281057 3281133 . - . ID=gene3073;Name=YPN_RS15390;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS15390;old_locus_tag=YPN_r086 NC_008149.1 tRNAscan-SE tRNA 3281057 3281133 . - . ID=rna73;Parent=gene3073;anticodon=(pos:complement(3281097..3281099));gbkey=tRNA;product=tRNA-Asp NC_008149.1 tRNAscan-SE exon 3281057 3281133 . - . ID=id258;Parent=rna73;anticodon=(pos:complement(3281097..3281099));gbkey=tRNA;product=tRNA-Asp NC_008149.1 RefSeq gene 3281259 3281374 . - . ID=gene3074;Name=YPN_RS15395;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS15395;old_locus_tag=YPN_r087 NC_008149.1 cmsearch rRNA 3281259 3281374 . - . ID=rna74;Parent=gene3074;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 cmsearch exon 3281259 3281374 . - . ID=id259;Parent=rna74;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 RefSeq gene 3281466 3284399 . - . ID=gene3075;Name=YPN_RS15400;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS15400;old_locus_tag=YPN_r088 NC_008149.1 RefSeq rRNA 3281466 3284399 . - . ID=rna75;Parent=gene3075;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq exon 3281466 3284399 . - . ID=id260;Parent=rna75;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq gene 3284643 3284718 . - . ID=gene3076;Name=YPN_RS15405;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS15405;old_locus_tag=YPN_r089 NC_008149.1 tRNAscan-SE tRNA 3284643 3284718 . - . ID=rna76;Parent=gene3076;anticodon=(pos:complement(3284682..3284684));gbkey=tRNA;product=tRNA-Glu NC_008149.1 tRNAscan-SE exon 3284643 3284718 . - . ID=id261;Parent=rna76;anticodon=(pos:complement(3284682..3284684));gbkey=tRNA;product=tRNA-Glu NC_008149.1 RefSeq gene 3284852 3286400 . - . ID=gene3077;Name=YPN_RS15410;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS15410;old_locus_tag=YPN_r090 NC_008149.1 RefSeq rRNA 3284852 3286400 . - . ID=rna77;Parent=gene3077;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq exon 3284852 3286400 . - . ID=id262;Parent=rna77;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq gene 3286839 3287405 . - . ID=gene3078;Name=YPN_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15415;old_locus_tag=YPN_2925 NC_008149.1 Protein Homology CDS 3286839 3287405 . - 0 ID=cds2996;Parent=gene3078;Dbxref=Genbank:WP_002220062.1;Name=WP_002220062.1;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;gbkey=CDS;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002220062.1;transl_table=11 NC_008149.1 RefSeq gene 3287592 3288623 . + . ID=gene3079;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=YPN_RS15420;old_locus_tag=YPN_2926 NC_008149.1 Protein Homology CDS 3287592 3288623 . + 0 ID=cds2997;Parent=gene3079;Dbxref=Genbank:WP_002212161.1;Name=WP_002212161.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=methionine ABC transporter ATP-binding protein;protein_id=WP_002212161.1;transl_table=11 NC_008149.1 RefSeq gene 3288616 3289269 . + . ID=gene3080;Name=YPN_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15425;old_locus_tag=YPN_2927 NC_008149.1 Protein Homology CDS 3288616 3289269 . + 0 ID=cds2998;Parent=gene3080;Dbxref=Genbank:WP_002212160.1;Name=WP_002212160.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;product=methionine ABC transporter;protein_id=WP_002212160.1;transl_table=11 NC_008149.1 RefSeq gene 3289333 3290148 . + . ID=gene3081;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=YPN_RS15430;old_locus_tag=YPN_2928 NC_008149.1 Protein Homology CDS 3289333 3290148 . + 0 ID=cds2999;Parent=gene3081;Dbxref=Genbank:WP_002212159.1;Name=WP_002212159.1;gbkey=CDS;gene=metQ;product=D-methionine-binding lipoprotein MetQ;protein_id=WP_002212159.1;transl_table=11 NC_008149.1 RefSeq gene 3290266 3290673 . + . ID=gene3082;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=YPN_RS15435;old_locus_tag=YPN_2929 NC_008149.1 Protein Homology CDS 3290266 3290673 . + 0 ID=cds3000;Parent=gene3082;Dbxref=Genbank:WP_002212158.1;Name=WP_002212158.1;gbkey=CDS;gene=rcsF;product=hypothetical protein;protein_id=WP_002212158.1;transl_table=11 NC_008149.1 RefSeq gene 3290670 3291377 . + . ID=gene3083;Name=YPN_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15440;old_locus_tag=YPN_2930 NC_008149.1 Protein Homology CDS 3290670 3291377 . + 0 ID=cds3001;Parent=gene3083;Dbxref=Genbank:WP_002212157.1;Name=WP_002212157.1;gbkey=CDS;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=WP_002212157.1;transl_table=11 NC_008149.1 RefSeq gene 3291481 3293199 . + . ID=gene3084;Name=YPN_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15445;old_locus_tag=YPN_2931 NC_008149.1 Protein Homology CDS 3291481 3293199 . + 0 ID=cds3002;Parent=gene3084;Dbxref=Genbank:WP_002212156.1;Name=WP_002212156.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_002212156.1;transl_table=11 NC_008149.1 RefSeq gene 3293333 3294016 . - . ID=gene3085;Name=YPN_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15450;old_locus_tag=YPN_2932 NC_008149.1 Protein Homology CDS 3293333 3294016 . - 0 ID=cds3003;Parent=gene3085;Dbxref=Genbank:WP_002212155.1;Name=WP_002212155.1;gbkey=CDS;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=WP_002212155.1;transl_table=11 NC_008149.1 RefSeq gene 3294101 3294517 . - . ID=gene3086;Name=YPN_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15455;old_locus_tag=YPN_2933 NC_008149.1 Protein Homology CDS 3294101 3294517 . - 0 ID=cds3004;Parent=gene3086;Dbxref=Genbank:WP_002212154.1;Name=WP_002212154.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212154.1;transl_table=11 NC_008149.1 RefSeq gene 3294520 3295068 . - . ID=gene3087;Name=YPN_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15460;old_locus_tag=YPN_2934 NC_008149.1 Protein Homology CDS 3294520 3295068 . - 0 ID=cds3005;Parent=gene3087;Dbxref=Genbank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212153.1;transl_table=11 NC_008149.1 RefSeq gene 3295310 3295510 . + . ID=gene3088;Name=YPN_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15465;old_locus_tag=YPN_2935 NC_008149.1 Protein Homology CDS 3295310 3295510 . + 0 ID=cds3006;Parent=gene3088;Dbxref=Genbank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212152.1;transl_table=11 NC_008149.1 RefSeq gene 3295497 3295757 . + . ID=gene3089;Name=YPN_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15470;old_locus_tag=YPN_2936 NC_008149.1 Protein Homology CDS 3295497 3295757 . + 0 ID=cds3007;Parent=gene3089;Dbxref=Genbank:WP_002218374.1;Name=WP_002218374.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11 NC_008149.1 RefSeq gene 3296022 3296339 . - . ID=gene3090;Name=YPN_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15475;old_locus_tag=YPN_2937 NC_008149.1 Protein Homology CDS 3296022 3296339 . - 0 ID=cds3008;Parent=gene3090;Dbxref=Genbank:WP_002212150.1;Name=WP_002212150.1;gbkey=CDS;product=cytochrome C554;protein_id=WP_002212150.1;transl_table=11 NC_008149.1 RefSeq gene 3296576 3297958 . - . ID=gene3091;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=YPN_RS15480;old_locus_tag=YPN_2938 NC_008149.1 Protein Homology CDS 3296576 3297958 . - 0 ID=cds3009;Parent=gene3091;Dbxref=Genbank:WP_002212149.1;Name=WP_002212149.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthase;protein_id=WP_002212149.1;transl_table=11 NC_008149.1 RefSeq gene 3297960 3298358 . - . ID=gene3092;Name=YPN_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15485;old_locus_tag=YPN_2939 NC_008149.1 Protein Homology CDS 3297960 3298358 . - 0 ID=cds3010;Parent=gene3092;Dbxref=Genbank:WP_002212148.1;Name=WP_002212148.1;gbkey=CDS;product=lyase;protein_id=WP_002212148.1;transl_table=11 NC_008149.1 RefSeq gene 3298542 3299501 . - . ID=gene3093;Name=YPN_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15490;old_locus_tag=YPN_2940 NC_008149.1 Protein Homology CDS 3298542 3299501 . - 0 ID=cds3011;Parent=gene3093;Dbxref=Genbank:WP_002212147.1;Name=WP_002212147.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002212147.1;transl_table=11 NC_008149.1 RefSeq gene 3299514 3302996 . - . ID=gene3094;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=YPN_RS15495;old_locus_tag=YPN_2941 NC_008149.1 Protein Homology CDS 3299514 3302996 . - 0 ID=cds3012;Parent=gene3094;Dbxref=Genbank:WP_002228634.1;Name=WP_002228634.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_002228634.1;transl_table=11 NC_008149.1 RefSeq gene 3303159 3303755 . - . ID=gene3095;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=YPN_RS15500;old_locus_tag=YPN_2942 NC_008149.1 Protein Homology CDS 3303159 3303755 . - 0 ID=cds3013;Parent=gene3095;Dbxref=Genbank:WP_002212145.1;Name=WP_002212145.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11 NC_008149.1 RefSeq gene 3303752 3304936 . - . ID=gene3096;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=YPN_RS15505;old_locus_tag=YPN_2943 NC_008149.1 Protein Homology CDS 3303752 3304936 . - 0 ID=cds3014;Parent=gene3096;Dbxref=Genbank:WP_002212144.1;Name=WP_002212144.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=WP_002212144.1;transl_table=11 NC_008149.1 RefSeq gene 3304940 3305728 . - . ID=gene3097;Name=YPN_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15510;old_locus_tag=YPN_2944 NC_008149.1 Protein Homology CDS 3304940 3305728 . - 0 ID=cds3015;Parent=gene3097;Dbxref=Genbank:WP_002212143.1;Name=WP_002212143.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;product=acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002212143.1;transl_table=11 NC_008149.1 RefSeq gene 3305732 3306262 . - . ID=gene3098;Name=YPN_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15515;old_locus_tag=YPN_2945 NC_008149.1 Protein Homology CDS 3305732 3306262 . - 0 ID=cds3016;Parent=gene3098;Dbxref=Genbank:WP_002217656.1;Name=WP_002217656.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_002217656.1;transl_table=11 NC_008149.1 RefSeq gene 3306420 3307442 . - . ID=gene3099;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=YPN_RS15520;old_locus_tag=YPN_2946 NC_008149.1 Protein Homology CDS 3306420 3307442 . - 0 ID=cds3017;Parent=gene3099;Dbxref=Genbank:WP_002212141.1;Name=WP_002212141.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_002212141.1;transl_table=11 NC_008149.1 RefSeq gene 3307446 3307943 . - . ID=gene3100;Name=YPN_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15525;old_locus_tag=YPN_2947 NC_008149.1 Protein Homology CDS 3307446 3307943 . - 0 ID=cds3018;Parent=gene3100;Dbxref=Genbank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;product=chaperone protein Skp;protein_id=WP_002212140.1;transl_table=11 NC_008149.1 RefSeq gene 3308101 3310488 . - . ID=gene3101;Name=YPN_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15530;old_locus_tag=YPN_2948 NC_008149.1 Protein Homology CDS 3308101 3310488 . - 0 ID=cds3019;Parent=gene3101;Dbxref=Genbank:WP_002212139.1;Name=WP_002212139.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane protein assembly factor BamA;protein_id=WP_002212139.1;transl_table=11 NC_008149.1 RefSeq gene 3310525 3311880 . - . ID=gene3102;Name=YPN_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15535;old_locus_tag=YPN_2949 NC_008149.1 Protein Homology CDS 3310525 3311880 . - 0 ID=cds3020;Parent=gene3102;Dbxref=Genbank:WP_002212138.1;Name=WP_002212138.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=protease RseP;protein_id=WP_002212138.1;transl_table=11 NC_008149.1 RefSeq gene 3311909 3312757 . - . ID=gene3103;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=YPN_RS15540;old_locus_tag=YPN_2950 NC_008149.1 Protein Homology CDS 3311909 3312757 . - 0 ID=cds3021;Parent=gene3103;Dbxref=Genbank:WP_002212137.1;Name=WP_002212137.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=WP_002212137.1;transl_table=11 NC_008149.1 RefSeq gene 3312767 3313525 . - . ID=gene3104;Name=YPN_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15545;old_locus_tag=YPN_2951 NC_008149.1 Protein Homology CDS 3312767 3313525 . - 0 ID=cds3022;Parent=gene3104;Dbxref=Genbank:WP_002212136.1;Name=WP_002212136.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific);protein_id=WP_002212136.1;transl_table=11 NC_008149.1 RefSeq gene 3313749 3314945 . - . ID=gene3105;Name=YPN_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15550;old_locus_tag=YPN_2952 NC_008149.1 Protein Homology CDS 3313749 3314945 . - 0 ID=cds3023;Parent=gene3105;Dbxref=Genbank:WP_002212135.1;Name=WP_002212135.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_002212135.1;transl_table=11 NC_008149.1 RefSeq gene 3315159 3315716 . - . ID=gene3106;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=YPN_RS15555;old_locus_tag=YPN_2953 NC_008149.1 Protein Homology CDS 3315159 3315716 . - 0 ID=cds3024;Parent=gene3106;Dbxref=Genbank:WP_002212134.1;Name=WP_002212134.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome-recycling factor;protein_id=WP_002212134.1;transl_table=11 NC_008149.1 RefSeq gene 3315852 3316577 . - . ID=gene3107;Name=YPN_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15560;old_locus_tag=YPN_2954 NC_008149.1 Protein Homology CDS 3315852 3316577 . - 0 ID=cds3025;Parent=gene3107;Dbxref=Genbank:WP_002212133.1;Name=WP_002212133.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_002212133.1;transl_table=11 NC_008149.1 RefSeq gene 3316786 3317643 . - . ID=gene3108;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=YPN_RS15565;old_locus_tag=YPN_2956 NC_008149.1 Protein Homology CDS 3316786 3317643 . - 0 ID=cds3026;Parent=gene3108;Dbxref=Genbank:WP_002212132.1;Name=WP_002212132.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_002212132.1;transl_table=11 NC_008149.1 RefSeq gene 3317771 3318496 . - . ID=gene3109;Name=YPN_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15570;old_locus_tag=YPN_2957 NC_008149.1 Protein Homology CDS 3317771 3318496 . - 0 ID=cds3027;Parent=gene3109;Dbxref=Genbank:WP_002221800.1;Name=WP_002221800.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11 NC_008149.1 RefSeq gene 3318931 3319722 . + . ID=gene3110;Name=YPN_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15575;old_locus_tag=YPN_2958 NC_008149.1 Protein Homology CDS 3318931 3319722 . + 0 ID=cds3028;Parent=gene3110;Dbxref=Genbank:WP_002212130.1;Name=WP_002212130.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_002212130.1;transl_table=11 NC_008149.1 RefSeq gene 3319782 3322463 . + . ID=gene3111;Name=YPN_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15580;old_locus_tag=YPN_2959 NC_008149.1 Protein Homology CDS 3319782 3322463 . + 0 ID=cds3029;Parent=gene3111;Dbxref=Genbank:WP_002212129.1;Name=WP_002212129.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;product=uridylyltransferase;protein_id=WP_002212129.1;transl_table=11 NC_008149.1 RefSeq gene 3322638 3323462 . + . ID=gene3112;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=YPN_RS15585;old_locus_tag=YPN_2960 NC_008149.1 Protein Homology CDS 3322638 3323462 . + 0 ID=cds3030;Parent=gene3112;Dbxref=Genbank:WP_002212128.1;Name=WP_002212128.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002212128.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3323492 3324213 . + . ID=id263;gbkey=repeat_region NC_008149.1 RefSeq gene 3323643 3324101 . + . ID=gene3113;Name=YPN_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15590;old_locus_tag=YPN_2961 NC_008149.1 Protein Homology CDS 3323643 3324101 . + 0 ID=cds3031;Parent=gene3113;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 3324297 3324686 . + . ID=gene3114;Name=YPN_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15595;old_locus_tag=YPN_2962 NC_008149.1 Protein Homology CDS 3324297 3324686 . + 0 ID=cds3032;Parent=gene3114;Dbxref=Genbank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212127.1;transl_table=11 NC_008149.1 RefSeq gene 3324776 3325225 . - . ID=gene3115;Name=YPN_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15600;old_locus_tag=YPN_2963 NC_008149.1 Protein Homology CDS 3324776 3325225 . - 0 ID=cds3033;Parent=gene3115;Dbxref=Genbank:WP_002212126.1;Name=WP_002212126.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin;protein_id=WP_002212126.1;transl_table=11 NC_008149.1 RefSeq gene 3325253 3326026 . - . ID=gene3116;Name=YPN_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15605;old_locus_tag=YPN_2964 NC_008149.1 Protein Homology CDS 3325253 3326026 . - 0 ID=cds3034;Parent=gene3116;Dbxref=Genbank:WP_002212125.1;Name=WP_002212125.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=WP_002212125.1;transl_table=11 NC_008149.1 RefSeq gene 3326026 3326358 . - . ID=gene3117;Name=YPN_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15610;old_locus_tag=YPN_2965 NC_008149.1 Protein Homology CDS 3326026 3326358 . - 0 ID=cds3035;Parent=gene3117;Dbxref=Genbank:WP_002212124.1;Name=WP_002212124.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212124.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3326501 3327222 . + . ID=id264;gbkey=repeat_region NC_008149.1 RefSeq gene 3326612 3327070 . - . ID=gene3118;Name=YPN_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15615;old_locus_tag=YPN_2966 NC_008149.1 Protein Homology CDS 3326612 3327070 . - 0 ID=cds3036;Parent=gene3118;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 3327760 3328311 . - . ID=gene3119;Name=YPN_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15620;old_locus_tag=YPN_2967 NC_008149.1 Protein Homology CDS 3327760 3328311 . - 0 ID=cds3037;Parent=gene3119;Dbxref=Genbank:WP_002212123.1;Name=WP_002212123.1;gbkey=CDS;product=protein Syd;protein_id=WP_002212123.1;transl_table=11 NC_008149.1 RefSeq gene 3328443 3329288 . + . ID=gene3120;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=YPN_RS15625;old_locus_tag=YPN_2968 NC_008149.1 Protein Homology CDS 3328443 3329288 . + 0 ID=cds3038;Parent=gene3120;Dbxref=Genbank:WP_002212122.1;Name=WP_002212122.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=WP_002212122.1;transl_table=11 NC_008149.1 RefSeq gene 3329441 3330805 . + . ID=gene3121;Name=YPN_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15630;old_locus_tag=YPN_2969 NC_008149.1 Protein Homology CDS 3329441 3330805 . + 0 ID=cds3039;Parent=gene3121;Dbxref=Genbank:WP_002212121.1;Name=WP_002212121.1;gbkey=CDS;product=LOG family protein;protein_id=WP_002212121.1;transl_table=11 NC_008149.1 RefSeq gene 3331065 3331820 . + . ID=gene3122;Name=YPN_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15635;old_locus_tag=YPN_2970 NC_008149.1 Protein Homology CDS 3331065 3331820 . + 0 ID=cds3040;Parent=gene3122;Dbxref=Genbank:WP_002215970.1;Name=WP_002215970.1;Note=similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity;gbkey=CDS;product=flap endonuclease Xni;protein_id=WP_002215970.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3331852 3332030 . + . ID=id265;gbkey=repeat_region NC_008149.1 RefSeq gene 3332071 3333177 . - . ID=gene3123;Name=YPN_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15640;old_locus_tag=YPN_2971 NC_008149.1 Protein Homology CDS 3332071 3333177 . - 0 ID=cds3041;Parent=gene3123;Dbxref=Genbank:WP_002212119.1;Name=WP_002212119.1;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase M;protein_id=WP_002212119.1;transl_table=11 NC_008149.1 RefSeq gene 3333170 3333550 . - . ID=gene3124;Name=YPN_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15645;old_locus_tag=YPN_2972 NC_008149.1 Protein Homology CDS 3333170 3333550 . - 0 ID=cds3042;Parent=gene3124;Dbxref=Genbank:WP_002353892.1;Name=WP_002353892.1;gbkey=CDS;product=membrane protein;protein_id=WP_002353892.1;transl_table=11 NC_008149.1 RefSeq gene 3333731 3334648 . - . ID=gene3125;Name=YPN_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15650;old_locus_tag=YPN_2973 NC_008149.1 Protein Homology CDS 3333731 3334648 . - 0 ID=cds3043;Parent=gene3125;Dbxref=Genbank:WP_002212117.1;Name=WP_002212117.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212117.1;transl_table=11 NC_008149.1 RefSeq gene 3335308 3336513 . + . ID=gene3126;Name=YPN_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15655;old_locus_tag=YPN_2974 NC_008149.1 Protein Homology CDS 3335308 3336513 . + 0 ID=cds3044;Parent=gene3126;Dbxref=Genbank:WP_002212116.1;Name=WP_002212116.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_002212116.1;transl_table=11 NC_008149.1 RefSeq gene 3336648 3337091 . + . ID=gene3127;Name=YPN_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15660;old_locus_tag=YPN_2975 NC_008149.1 Protein Homology CDS 3336648 3337091 . + 0 ID=cds3045;Parent=gene3127;Dbxref=Genbank:WP_002212115.1;Name=WP_002212115.1;gbkey=CDS;product=Fe-S metabolism protein SufE;protein_id=WP_002212115.1;transl_table=11 NC_008149.1 RefSeq gene 3337127 3337954 . - . ID=gene3128;Name=YPN_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15665;old_locus_tag=YPN_2976 NC_008149.1 Protein Homology CDS 3337127 3337954 . - 0 ID=cds3046;Parent=gene3128;Dbxref=Genbank:WP_002212114.1;Name=WP_002212114.1;Note=accepts sulfur from CsdA;gbkey=CDS;product=sulfur acceptor protein CsdL;protein_id=WP_002212114.1;transl_table=11 NC_008149.1 RefSeq gene 3338097 3339269 . - . ID=gene3129;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=YPN_RS15670;old_locus_tag=YPN_2977 NC_008149.1 Protein Homology CDS 3338097 3339269 . - 0 ID=cds3047;Parent=gene3129;Dbxref=Genbank:WP_002228046.1;Name=WP_002228046.1;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltA;product=murein transglycosylase;protein_id=WP_002228046.1;transl_table=11 NC_008149.1 RefSeq gene 3339485 3339561 . + . ID=gene3130;Name=YPN_RS15675;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS15675;old_locus_tag=YPN_r092 NC_008149.1 tRNAscan-SE tRNA 3339485 3339561 . + . ID=rna78;Parent=gene3130;anticodon=(pos:3339519..3339521);gbkey=tRNA;product=tRNA-Met NC_008149.1 tRNAscan-SE exon 3339485 3339561 . + . ID=id266;Parent=rna78;anticodon=(pos:3339519..3339521);gbkey=tRNA;product=tRNA-Met NC_008149.1 RefSeq gene 3339685 3339761 . + . ID=gene3131;Name=YPN_RS15680;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS15680;old_locus_tag=YPN_r093 NC_008149.1 tRNAscan-SE tRNA 3339685 3339761 . + . ID=rna79;Parent=gene3131;anticodon=(pos:3339719..3339721);gbkey=tRNA;product=tRNA-Met NC_008149.1 tRNAscan-SE exon 3339685 3339761 . + . ID=id267;Parent=rna79;anticodon=(pos:3339719..3339721);gbkey=tRNA;product=tRNA-Met NC_008149.1 RefSeq gene 3339991 3341241 . - . ID=gene3132;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=YPN_RS15685;old_locus_tag=YPN_2978 NC_008149.1 Protein Homology CDS 3339991 3341241 . - 0 ID=cds3048;Parent=gene3132;Dbxref=Genbank:WP_002211623.1;Name=WP_002211623.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002211623.1;transl_table=11 NC_008149.1 RefSeq gene 3341477 3342802 . + . ID=gene3133;Name=YPN_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15690;old_locus_tag=YPN_2979 NC_008149.1 Protein Homology CDS 3341477 3342802 . + 0 ID=cds3049;Parent=gene3133;Dbxref=Genbank:WP_002211624.1;Name=WP_002211624.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;product=amino-acid acetyltransferase;protein_id=WP_002211624.1;transl_table=11 NC_008149.1 RefSeq gene 3342957 3344915 . - . ID=gene3134;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=YPN_RS15695;old_locus_tag=YPN_2980 NC_008149.1 Protein Homology CDS 3342957 3344915 . - 0 ID=cds3050;Parent=gene3134;Dbxref=Genbank:WP_002215834.1;Name=WP_002215834.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=WP_002215834.1;transl_table=11 NC_008149.1 RefSeq gene 3344912 3348574 . - . ID=gene3135;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=YPN_RS15700;old_locus_tag=YPN_2981 NC_008149.1 Protein Homology CDS 3344912 3348574 . - 0 ID=cds3051;Parent=gene3135;Dbxref=Genbank:WP_002215833.1;Name=WP_002215833.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=WP_002215833.1;transl_table=11 NC_008149.1 RefSeq gene 3348571 3351459 . - . ID=gene3136;Name=YPN_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15705;old_locus_tag=YPN_2982 NC_008149.1 Protein Homology CDS 3348571 3351459 . - 0 ID=cds3052;Parent=gene3136;Dbxref=Genbank:WP_002211626.1;Name=WP_002211626.1;Note=degrades small peptides;gbkey=CDS;product=protease III;protein_id=WP_002211626.1;transl_table=11 NC_008149.1 RefSeq gene 3351541 3354912 . - . ID=gene3137;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=YPN_RS15710;old_locus_tag=YPN_2983 NC_008149.1 Protein Homology CDS 3351541 3354912 . - 0 ID=cds3053;Parent=gene3137;Dbxref=Genbank:WP_002211627.1;Name=WP_002211627.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_002211627.1;transl_table=11 NC_008149.1 RefSeq gene 3355047 3355412 . - . ID=gene3138;Name=YPN_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15715;old_locus_tag=YPN_2984 NC_008149.1 Protein Homology CDS 3355047 3355412 . - 0 ID=cds3054;Parent=gene3138;Dbxref=Genbank:WP_002211628.1;Name=WP_002211628.1;gbkey=CDS;product=peptidase;protein_id=WP_002211628.1;transl_table=11 NC_008149.1 RefSeq gene 3355445 3355915 . - . ID=gene3139;Name=YPN_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15720;old_locus_tag=YPN_2985 NC_008149.1 Protein Homology CDS 3355445 3355915 . - 0 ID=cds3055;Parent=gene3139;Dbxref=Genbank:WP_002211629.1;Name=WP_002211629.1;gbkey=CDS;product=membrane protein;protein_id=WP_002211629.1;transl_table=11 NC_008149.1 RefSeq gene 3355912 3356520 . - . ID=gene3140;Name=YPN_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15725;old_locus_tag=YPN_2986 NC_008149.1 Protein Homology CDS 3355912 3356520 . - 0 ID=cds3056;Parent=gene3140;Dbxref=Genbank:WP_002211630.1;Name=WP_002211630.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002211630.1;transl_table=11 NC_008149.1 RefSeq gene 3356511 3357080 . - . ID=gene3141;Name=YPN_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15730;old_locus_tag=YPN_2987 NC_008149.1 Protein Homology CDS 3356511 3357080 . - 0 ID=cds3057;Parent=gene3141;Dbxref=Genbank:WP_002228638.1;Name=WP_002228638.1;gbkey=CDS;product=cleavage protein;protein_id=WP_002228638.1;transl_table=11 NC_008149.1 RefSeq gene 3357067 3357288 . - . ID=gene3142;Name=YPN_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15735 NC_008149.1 Protein Homology CDS 3357067 3357288 . - 0 ID=cds3058;Parent=gene3142;Dbxref=Genbank:WP_032485737.1;Name=WP_032485737.1;gbkey=CDS;product=membrane protein;protein_id=WP_032485737.1;transl_table=11 NC_008149.1 RefSeq gene 3357308 3358102 . - . ID=gene3143;Name=YPN_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15740;old_locus_tag=YPN_2988 NC_008149.1 Protein Homology CDS 3357308 3358102 . - 0 ID=cds3059;Parent=gene3143;Dbxref=Genbank:WP_002211384.1;Name=WP_002211384.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_002211384.1;transl_table=11 NC_008149.1 RefSeq gene 3358109 3358981 . - . ID=gene3144;Name=YPN_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15745;old_locus_tag=YPN_2989 NC_008149.1 Protein Homology CDS 3358109 3358981 . - 0 ID=cds3060;Parent=gene3144;Dbxref=Genbank:WP_002211383.1;Name=WP_002211383.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11 NC_008149.1 RefSeq gene 3359232 3361478 . - . ID=gene3145;Name=YPN_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15750;old_locus_tag=YPN_2990 NC_008149.1 Protein Homology CDS 3359232 3361478 . - 0 ID=cds3061;Parent=gene3145;Dbxref=Genbank:WP_002228076.1;Name=WP_002228076.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_002228076.1;transl_table=11 NC_008149.1 RefSeq gene 3361491 3362018 . - . ID=gene3146;Name=YPN_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15755;old_locus_tag=YPN_2991 NC_008149.1 Protein Homology CDS 3361491 3362018 . - 0 ID=cds3062;Parent=gene3146;Dbxref=Genbank:WP_002211381.1;Name=WP_002211381.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11 NC_008149.1 RefSeq gene 3362044 3362295 . - . ID=gene3147;Name=YPN_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15760 NC_008149.1 Protein Homology CDS 3362044 3362295 . - 0 ID=cds3063;Parent=gene3147;Dbxref=Genbank:WP_002228075.1;Name=WP_002228075.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228075.1;transl_table=11 NC_008149.1 RefSeq gene 3362292 3362483 . - . ID=gene3148;Name=YPN_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15765 NC_008149.1 Protein Homology CDS 3362292 3362483 . - 0 ID=cds3064;Parent=gene3148;Dbxref=Genbank:WP_002228074.1;Name=WP_002228074.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228074.1;transl_table=11 NC_008149.1 RefSeq gene 3362716 3363402 . + . ID=gene3149;Name=YPN_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15770;old_locus_tag=YPN_2992 NC_008149.1 Protein Homology CDS 3362716 3363402 . + 0 ID=cds3065;Parent=gene3149;Dbxref=Genbank:WP_002209838.1;Name=WP_002209838.1;gbkey=CDS;product=DNA mismatch repair protein MutH;protein_id=WP_002209838.1;transl_table=11 NC_008149.1 RefSeq gene 3363809 3364849 . + . ID=gene3150;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=YPN_RS15775;old_locus_tag=YPN_2993 NC_008149.1 Protein Homology CDS 3363809 3364849 . + 0 ID=cds3066;Parent=gene3150;Dbxref=Genbank:WP_002209839.1;Name=WP_002209839.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3364905 3365073 . + . ID=id268;gbkey=repeat_region NC_008149.1 RefSeq gene 3365226 3365477 . - . ID=gene3151;Name=YPN_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15780 NC_008149.1 Protein Homology CDS 3365226 3365477 . - 0 ID=cds3067;Parent=gene3151;Dbxref=Genbank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11 NC_008149.1 RefSeq gene 3365556 3365789 . + . ID=gene3152;Name=YPN_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15785;old_locus_tag=YPN_2994 NC_008149.1 Protein Homology CDS 3365556 3365789 . + 0 ID=cds3068;Parent=gene3152;Dbxref=Genbank:WP_002228641.1;Name=WP_002228641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228641.1;transl_table=11 NC_008149.1 RefSeq gene 3365818 3367038 . - . ID=gene3153;Name=YPN_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15790;old_locus_tag=YPN_2995 NC_008149.1 Protein Homology CDS 3365818 3367038 . - 0 ID=cds3069;Parent=gene3153;Dbxref=Genbank:WP_002209842.1;Name=WP_002209842.1;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11 NC_008149.1 RefSeq gene 3367035 3368993 . - . ID=gene3154;Name=YPN_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15795;old_locus_tag=YPN_2996 NC_008149.1 Protein Homology CDS 3367035 3368993 . - 0 ID=cds3070;Parent=gene3154;Dbxref=Genbank:WP_002228642.1;Name=WP_002228642.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;product=2-acyl-glycerophospho-ethanolamine acyltransferase;protein_id=WP_002228642.1;transl_table=11 NC_008149.1 RefSeq gene 3368981 3369190 . - . ID=gene3155;Name=YPN_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15800;old_locus_tag=YPN_2997 NC_008149.1 Protein Homology CDS 3368981 3369190 . - 0 ID=cds3071;Parent=gene3155;Dbxref=Genbank:WP_002228643.1;Name=WP_002228643.1;gbkey=CDS;product=long-chain fatty acid--CoA ligase;protein_id=WP_002228643.1;transl_table=11 NC_008149.1 RefSeq gene 3369639 3371900 . - . ID=gene3156;Name=YPN_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15805;old_locus_tag=YPN_2998 NC_008149.1 Protein Homology CDS 3369639 3371900 . - 0 ID=cds3072;Parent=gene3156;Dbxref=Genbank:WP_002209844.1;Name=WP_002209844.1;gbkey=CDS;product=biotin transporter BioY;protein_id=WP_002209844.1;transl_table=11 NC_008149.1 RefSeq gene 3372210 3373232 . + . ID=gene3157;Name=YPN_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15810;old_locus_tag=YPN_2999 NC_008149.1 Protein Homology CDS 3372210 3373232 . + 0 ID=cds3073;Parent=gene3157;Dbxref=Genbank:WP_002209845.1;Name=WP_002209845.1;Note=controls transcription of galETKM;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209845.1;transl_table=11 NC_008149.1 RefSeq gene 3373229 3374491 . - . ID=gene3158;Name=YPN_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15815;old_locus_tag=YPN_3000 NC_008149.1 Protein Homology CDS 3373229 3374491 . - 0 ID=cds3074;Parent=gene3158;Dbxref=Genbank:WP_002209846.1;Name=WP_002209846.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=WP_002209846.1;transl_table=11 NC_008149.1 RefSeq gene 3374706 3375647 . + . ID=gene3159;Name=YPN_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15820;old_locus_tag=YPN_3001 NC_008149.1 Protein Homology CDS 3374706 3375647 . + 0 ID=cds3075;Parent=gene3159;Dbxref=Genbank:WP_002209847.1;Name=WP_002209847.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209847.1;transl_table=11 NC_008149.1 RefSeq gene 3375644 3376804 . - . ID=gene3160;Name=YPN_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15825;old_locus_tag=YPN_3002 NC_008149.1 Protein Homology CDS 3375644 3376804 . - 0 ID=cds3076;Parent=gene3160;Dbxref=Genbank:WP_002209848.1;Name=WP_002209848.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002209848.1;transl_table=11 NC_008149.1 RefSeq gene 3377173 3378081 . - . ID=gene3161;Name=YPN_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15830;old_locus_tag=YPN_3003 NC_008149.1 Protein Homology CDS 3377173 3378081 . - 0 ID=cds3077;Parent=gene3161;Dbxref=Genbank:WP_002209849.1;Name=WP_002209849.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209849.1;transl_table=11 NC_008149.1 RefSeq gene 3378188 3379075 . + . ID=gene3162;Name=YPN_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15835;old_locus_tag=YPN_3004 NC_008149.1 Protein Homology CDS 3378188 3379075 . + 0 ID=cds3078;Parent=gene3162;Dbxref=Genbank:WP_002209850.1;Name=WP_002209850.1;gbkey=CDS;product=MBL fold metallo-hydrolase;protein_id=WP_002209850.1;transl_table=11 NC_008149.1 RefSeq gene 3379188 3379823 . + . ID=gene3163;Name=YPN_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15840;old_locus_tag=YPN_3005 NC_008149.1 Protein Homology CDS 3379188 3379823 . + 0 ID=cds3079;Parent=gene3163;Dbxref=Genbank:WP_002209852.1;Name=WP_002209852.1;gbkey=CDS;product=protein-disulfide isomerase;protein_id=WP_002209852.1;transl_table=11 NC_008149.1 RefSeq gene 3379809 3381500 . - . ID=gene3164;Name=YPN_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15845;old_locus_tag=YPN_3006 NC_008149.1 Protein Homology CDS 3379809 3381500 . - 0 ID=cds3080;Parent=gene3164;Dbxref=Genbank:WP_002209853.1;Name=WP_002209853.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002209853.1;transl_table=11 NC_008149.1 RefSeq gene 3381655 3382056 . - . ID=gene3165;Name=YPN_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15850;old_locus_tag=YPN_3007 NC_008149.1 Protein Homology CDS 3381655 3382056 . - 0 ID=cds3081;Parent=gene3165;Dbxref=Genbank:WP_002214100.1;Name=WP_002214100.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214100.1;transl_table=11 NC_008149.1 RefSeq gene 3382053 3382769 . - . ID=gene3166;Name=YPN_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15855;old_locus_tag=YPN_3008 NC_008149.1 Protein Homology CDS 3382053 3382769 . - 0 ID=cds3082;Parent=gene3166;Dbxref=Genbank:WP_002214099.1;Name=WP_002214099.1;gbkey=CDS;product=regulatory membrane protein;protein_id=WP_002214099.1;transl_table=11 NC_008149.1 RefSeq gene 3383053 3383358 . + . ID=gene3167;Name=YPN_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15860;old_locus_tag=YPN_3009 NC_008149.1 Protein Homology CDS 3383053 3383358 . + 0 ID=cds3083;Parent=gene3167;Dbxref=Genbank:WP_002214097.1;Name=WP_002214097.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002214097.1;transl_table=11 NC_008149.1 RefSeq gene 3383410 3384249 . - . ID=gene3168;Name=YPN_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15865;old_locus_tag=YPN_3010 NC_008149.1 Protein Homology CDS 3383410 3384249 . - 0 ID=cds3084;Parent=gene3168;Dbxref=Genbank:WP_002209856.1;Name=WP_002209856.1;gbkey=CDS;product=prepilin peptidase;protein_id=WP_002209856.1;transl_table=11 NC_008149.1 RefSeq gene 3384278 3384727 . - . ID=gene3169;Name=YPN_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15870;old_locus_tag=YPN_3011 NC_008149.1 Protein Homology CDS 3384278 3384727 . - 0 ID=cds3085;Parent=gene3169;Dbxref=Genbank:WP_002226092.1;Name=WP_002226092.1;gbkey=CDS;product=membrane protein;protein_id=WP_002226092.1;transl_table=11 NC_008149.1 RefSeq gene 3384736 3385926 . - . ID=gene3170;Name=YPN_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15875;old_locus_tag=YPN_3012 NC_008149.1 Protein Homology CDS 3384736 3385926 . - 0 ID=cds3086;Parent=gene3170;Dbxref=Genbank:WP_002209858.1;Name=WP_002209858.1;gbkey=CDS;product=type II secretion system protein GspL;protein_id=WP_002209858.1;transl_table=11 NC_008149.1 RefSeq gene 3385910 3386806 . - . ID=gene3171;Name=YPN_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15880;old_locus_tag=YPN_3013 NC_008149.1 Protein Homology CDS 3385910 3386806 . - 0 ID=cds3087;Parent=gene3171;Dbxref=Genbank:WP_002209859.1;Name=WP_002209859.1;gbkey=CDS;product=general secretion pathway protein GspK;protein_id=WP_002209859.1;transl_table=11 NC_008149.1 RefSeq gene 3386875 3387471 . - . ID=gene3172;Name=YPN_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15885;old_locus_tag=YPN_3014 NC_008149.1 Protein Homology CDS 3386875 3387471 . - 0 ID=cds3088;Parent=gene3172;Dbxref=Genbank:WP_002223730.1;Name=WP_002223730.1;gbkey=CDS;product=type II secretion system protein GspJ;protein_id=WP_002223730.1;transl_table=11 NC_008149.1 RefSeq gene 3387464 3387754 . - . ID=gene3173;Name=YPN_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15890;old_locus_tag=YPN_3015 NC_008149.1 Protein Homology CDS 3387464 3387754 . - 0 ID=cds3089;Parent=gene3173;Dbxref=Genbank:WP_002214093.1;Name=WP_002214093.1;gbkey=CDS;product=general secretion pathway protein GspI;protein_id=WP_002214093.1;transl_table=11 NC_008149.1 RefSeq gene 3387846 3388388 . - . ID=gene3174;Name=YPN_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15895;old_locus_tag=YPN_3016 NC_008149.1 Protein Homology CDS 3387846 3388388 . - 0 ID=cds3090;Parent=gene3174;Dbxref=Genbank:WP_002214092.1;Name=WP_002214092.1;gbkey=CDS;product=general secretion pathway protein GspH;protein_id=WP_002214092.1;transl_table=11 NC_008149.1 RefSeq gene 3388393 3388830 . - . ID=gene3175;Name=YPN_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15900;old_locus_tag=YPN_3017 NC_008149.1 Protein Homology CDS 3388393 3388830 . - 0 ID=cds3091;Parent=gene3175;Dbxref=Genbank:WP_002209862.1;Name=WP_002209862.1;gbkey=CDS;product=type II secretion system protein GspG;protein_id=WP_002209862.1;transl_table=11 NC_008149.1 RefSeq gene 3388850 3389896 . - . ID=gene3176;Name=YPN_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15905;old_locus_tag=YPN_3018 NC_008149.1 Protein Homology CDS 3388850 3389896 . - 0 ID=cds3092;Parent=gene3176;Dbxref=Genbank:WP_002229014.1;Name=WP_002229014.1;gbkey=CDS;product=type II secretion system protein F;protein_id=WP_002229014.1;transl_table=11 NC_008149.1 RefSeq gene 3389857 3390051 . - . ID=gene3177;Name=YPN_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15910 NC_008149.1 Protein Homology CDS 3389857 3390051 . - 0 ID=cds3093;Parent=gene3177;Dbxref=Genbank:WP_002214090.1;Name=WP_002214090.1;gbkey=CDS;product=general secretion pathway protein GspF;protein_id=WP_002214090.1;transl_table=11 NC_008149.1 RefSeq gene 3390038 3391549 . - . ID=gene3178;Name=YPN_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15915;old_locus_tag=YPN_3019 NC_008149.1 Protein Homology CDS 3390038 3391549 . - 0 ID=cds3094;Parent=gene3178;Dbxref=Genbank:WP_002209863.1;Name=WP_002209863.1;gbkey=CDS;product=type II secretion system protein GspE;protein_id=WP_002209863.1;transl_table=11 NC_008149.1 RefSeq gene 3391546 3393468 . - . ID=gene3179;Name=YPN_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15920;old_locus_tag=YPN_3020 NC_008149.1 Protein Homology CDS 3391546 3393468 . - 0 ID=cds3095;Parent=gene3179;Dbxref=Genbank:WP_002220086.1;Name=WP_002220086.1;gbkey=CDS;product=type II secretion system protein GspD;protein_id=WP_002220086.1;transl_table=11 NC_008149.1 RefSeq gene 3393549 3393950 . - . ID=gene3180;Name=YPN_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15925;old_locus_tag=YPN_3021 NC_008149.1 Protein Homology CDS 3393549 3393950 . - 0 ID=cds3096;Parent=gene3180;Dbxref=Genbank:WP_002209865.1;Name=WP_002209865.1;gbkey=CDS;product=general secretion pathway protein GspC;protein_id=WP_002209865.1;transl_table=11 NC_008149.1 RefSeq gene 3394120 3394536 . - . ID=gene3181;Name=YPN_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15930;old_locus_tag=YPN_3022 NC_008149.1 Protein Homology CDS 3394120 3394536 . - 0 ID=cds3097;Parent=gene3181;Dbxref=Genbank:WP_002209866.1;Name=WP_002209866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209866.1;transl_table=11 NC_008149.1 RefSeq gene 3395279 3396034 . - . ID=gene3182;Name=YPN_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15935;old_locus_tag=YPN_3023 NC_008149.1 Protein Homology CDS 3395279 3396034 . - 0 ID=cds3098;Parent=gene3182;Dbxref=Genbank:WP_002220090.1;Name=WP_002220090.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11 NC_008149.1 RefSeq gene 3396530 3396718 . + . ID=gene3183;Name=YPN_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15940 NC_008149.1 Protein Homology CDS 3396530 3396718 . + 0 ID=cds3099;Parent=gene3183;Dbxref=Genbank:WP_002214085.1;Name=WP_002214085.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214085.1;transl_table=11 NC_008149.1 RefSeq gene 3397105 3397299 . + . ID=gene3184;Name=YPN_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15945 NC_008149.1 Protein Homology CDS 3397105 3397299 . + 0 ID=cds3100;Parent=gene3184;Dbxref=Genbank:WP_002214083.1;Name=WP_002214083.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214083.1;transl_table=11 NC_008149.1 RefSeq gene 3397321 3398271 . + . ID=gene3185;Name=YPN_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15950;old_locus_tag=YPN_3025 NC_008149.1 Protein Homology CDS 3397321 3398271 . + 0 ID=cds3101;Parent=gene3185;Dbxref=Genbank:WP_002209868.1;Name=WP_002209868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209868.1;transl_table=11 NC_008149.1 RefSeq gene 3398386 3400572 . + . ID=gene3186;Name=YPN_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15955;old_locus_tag=YPN_3026 NC_008149.1 Protein Homology CDS 3398386 3400572 . + 0 ID=cds3102;Parent=gene3186;Dbxref=Genbank:WP_002209869.1;Name=WP_002209869.1;gbkey=CDS;product=autotransporter;protein_id=WP_002209869.1;transl_table=11 NC_008149.1 RefSeq gene 3400642 3403755 . + . ID=gene3187;Name=YPN_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15960;old_locus_tag=YPN_3027 NC_008149.1 Protein Homology CDS 3400642 3403755 . + 0 ID=cds3103;Parent=gene3187;Dbxref=Genbank:WP_002214081.1;Name=WP_002214081.1;gbkey=CDS;product=chondroitin ABC lyase;protein_id=WP_002214081.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3403826 3406664 . + . ID=id269;gbkey=repeat_region NC_008149.1 RefSeq gene 3404100 3404879 . - . ID=gene3188;Name=YPN_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15965;old_locus_tag=YPN_3029 NC_008149.1 Protein Homology CDS 3404100 3404879 . - 0 ID=cds3104;Parent=gene3188;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 3404879 3405901 . - . ID=gene3189;Name=YPN_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15970;old_locus_tag=YPN_3030 NC_008149.1 Protein Homology CDS 3404879 3405901 . - 0 ID=cds3105;Parent=gene3189;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 3405958 3406392 . + . ID=gene3190;Name=YPN_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15975;old_locus_tag=YPN_3031 NC_008149.1 Protein Homology CDS 3405958 3406392 . + 0 ID=cds3106;Parent=gene3190;Dbxref=Genbank:WP_002209872.1;Name=WP_002209872.1;gbkey=CDS;product=transposase;protein_id=WP_002209872.1;transl_table=11 NC_008149.1 RefSeq gene 3406844 3408397 . - . ID=gene3191;Name=YPN_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15980;old_locus_tag=YPN_3032 NC_008149.1 Protein Homology CDS 3406844 3408397 . - 0 ID=cds3107;Parent=gene3191;Dbxref=Genbank:WP_002209873.1;Name=WP_002209873.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209873.1;transl_table=11 NC_008149.1 RefSeq gene 3409237 3410013 . + . ID=gene3192;Name=YPN_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15985;old_locus_tag=YPN_3033 NC_008149.1 Protein Homology CDS 3409237 3410013 . + 0 ID=cds3108;Parent=gene3192;Dbxref=Genbank:WP_002209875.1;Name=WP_002209875.1;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;gbkey=CDS;product=DeoR family transcriptional regulator;protein_id=WP_002209875.1;transl_table=11 NC_008149.1 RefSeq gene 3410063 3411361 . + . ID=gene3193;Name=YPN_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15990;old_locus_tag=YPN_3034 NC_008149.1 Protein Homology CDS 3410063 3411361 . + 0 ID=cds3109;Parent=gene3193;Dbxref=Genbank:WP_002209876.1;Name=WP_002209876.1;Note=with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1%2C6-bisphosphate%3B subunit Z may act as a chaperone for the Y subunit;gbkey=CDS;product=tagatose 6-phosphate kinase;protein_id=WP_002209876.1;transl_table=11 NC_008149.1 RefSeq gene 3411358 3412524 . + . ID=gene3194;Name=YPN_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS15995;old_locus_tag=YPN_3035 NC_008149.1 Protein Homology CDS 3411358 3412524 . + 0 ID=cds3110;Parent=gene3194;Dbxref=Genbank:WP_002209877.1;Name=WP_002209877.1;gbkey=CDS;product=aldose isomerase;protein_id=WP_002209877.1;transl_table=11 NC_008149.1 RefSeq gene 3412542 3413039 . + . ID=gene3195;Name=YPN_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16000;old_locus_tag=YPN_3036 NC_008149.1 Protein Homology CDS 3412542 3413039 . + 0 ID=cds3111;Parent=gene3195;Dbxref=Genbank:WP_002209878.1;Name=WP_002209878.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_002209878.1;transl_table=11 NC_008149.1 RefSeq gene 3413086 3413874 . + . ID=gene3196;Name=YPN_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16005;old_locus_tag=YPN_3037 NC_008149.1 Protein Homology CDS 3413086 3413874 . + 0 ID=cds3112;Parent=gene3196;Dbxref=Genbank:WP_002209879.1;Name=WP_002209879.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11 NC_008149.1 RefSeq gene 3413864 3414754 . + . ID=gene3197;Name=YPN_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16010;old_locus_tag=YPN_3038 NC_008149.1 Protein Homology CDS 3413864 3414754 . + 0 ID=cds3113;Parent=gene3197;Dbxref=Genbank:WP_002209880.1;Name=WP_002209880.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IID with IIC forms the translocation channel%3B involved in N-acetylgalactosamine transport;gbkey=CDS;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_002209880.1;transl_table=11 NC_008149.1 RefSeq gene 3414840 3415280 . + . ID=gene3198;Name=YPN_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16015;old_locus_tag=YPN_3039 NC_008149.1 Protein Homology CDS 3414840 3415280 . + 0 ID=cds3114;Parent=gene3198;Dbxref=Genbank:WP_002209881.1;Name=WP_002209881.1;gbkey=CDS;product=PTS mannose transporter subunit IIA;protein_id=WP_002209881.1;transl_table=11 NC_008149.1 RefSeq gene 3415283 3416449 . + . ID=gene3199;Name=YPN_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16020;old_locus_tag=YPN_3040 NC_008149.1 Protein Homology CDS 3415283 3416449 . + 0 ID=cds3115;Parent=gene3199;Dbxref=Genbank:WP_002209882.1;Name=WP_002209882.1;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002209882.1;transl_table=11 NC_008149.1 RefSeq gene 3416645 3417400 . + . ID=gene3200;Name=YPN_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16025;old_locus_tag=YPN_3041 NC_008149.1 Protein Homology CDS 3416645 3417400 . + 0 ID=cds3116;Parent=gene3200;Dbxref=Genbank:WP_002209883.1;Name=WP_002209883.1;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=WP_002209883.1;transl_table=11 NC_008149.1 RefSeq gene 3417416 3418474 . + . ID=gene3201;Name=YPN_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16030;old_locus_tag=YPN_3042 NC_008149.1 Protein Homology CDS 3417416 3418474 . + 0 ID=cds3117;Parent=gene3201;Dbxref=Genbank:WP_002209884.1;Name=WP_002209884.1;gbkey=CDS;product=glycosyl hydrolase family 88;protein_id=WP_002209884.1;transl_table=11 NC_008149.1 RefSeq gene 3418718 3419944 . + . ID=gene3202;Name=YPN_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16035;old_locus_tag=YPN_3043 NC_008149.1 Protein Homology CDS 3418718 3419944 . + 0 ID=cds3118;Parent=gene3202;Dbxref=Genbank:WP_002209885.1;Name=WP_002209885.1;gbkey=CDS;product=anaerobic sulfatase maturase;protein_id=WP_002209885.1;transl_table=11 NC_008149.1 RefSeq gene 3419965 3421572 . + . ID=gene3203;Name=YPN_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16040;old_locus_tag=YPN_3044 NC_008149.1 Protein Homology CDS 3419965 3421572 . + 0 ID=cds3119;Parent=gene3203;Dbxref=Genbank:WP_002209886.1;Name=WP_002209886.1;gbkey=CDS;product=sulfatase;protein_id=WP_002209886.1;transl_table=11 NC_008149.1 RefSeq gene 3421695 3423182 . + . ID=gene3204;Name=YPN_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16045;old_locus_tag=YPN_3045 NC_008149.1 Protein Homology CDS 3421695 3423182 . + 0 ID=cds3120;Parent=gene3204;Dbxref=Genbank:WP_002209887.1;Name=WP_002209887.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209887.1;transl_table=11 NC_008149.1 RefSeq gene 3423291 3424145 . + . ID=gene3205;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=YPN_RS16050;old_locus_tag=YPN_3046 NC_008149.1 Protein Homology CDS 3423291 3424145 . + 0 ID=cds3121;Parent=gene3205;Dbxref=Genbank:WP_002209888.1;Name=WP_002209888.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;gbkey=CDS;gene=gatY;product=fructose-bisphosphate aldolase;protein_id=WP_002209888.1;transl_table=11 NC_008149.1 RefSeq gene 3424169 3424747 . + . ID=gene3206;Name=YPN_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16055;old_locus_tag=YPN_3047 NC_008149.1 Protein Homology CDS 3424169 3424747 . + 0 ID=cds3122;Parent=gene3206;Dbxref=Genbank:WP_002209889.1;Name=WP_002209889.1;gbkey=CDS;product=thiamine biogenesis protein ThiJ;protein_id=WP_002209889.1;transl_table=11 NC_008149.1 RefSeq gene 3424717 3424998 . - . ID=gene3207;Name=YPN_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16060 NC_008149.1 Protein Homology CDS 3424717 3424998 . - 0 ID=cds3123;Parent=gene3207;Dbxref=Genbank:WP_002215765.1;Name=WP_002215765.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215765.1;transl_table=11 NC_008149.1 RefSeq gene 3424988 3426070 . - . ID=gene3208;Name=YPN_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16065;old_locus_tag=YPN_3048 NC_008149.1 Protein Homology CDS 3424988 3426070 . - 0 ID=cds3124;Parent=gene3208;Dbxref=Genbank:WP_002209890.1;Name=WP_002209890.1;gbkey=CDS;product=cytochrome C peroxidase;protein_id=WP_002209890.1;transl_table=11 NC_008149.1 RefSeq gene 3426464 3427771 . + . ID=gene3209;Name=YPN_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16070;old_locus_tag=YPN_3049 NC_008149.1 Protein Homology CDS 3426464 3427771 . + 0 ID=cds3125;Parent=gene3209;Dbxref=Genbank:WP_002209891.1;Name=WP_002209891.1;Note=involved in the transport of aldohexuronates;gbkey=CDS;product=sugar transporter;protein_id=WP_002209891.1;transl_table=11 NC_008149.1 RefSeq gene 3427922 3430297 . + . ID=gene3210;Name=YPN_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16075;old_locus_tag=YPN_3050 NC_008149.1 Protein Homology CDS 3427922 3430297 . + 0 ID=cds3126;Parent=gene3210;Dbxref=Genbank:WP_002209892.1;Name=WP_002209892.1;gbkey=CDS;product=alpha-glucosidase;protein_id=WP_002209892.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3430340 3430511 . + . ID=id270;gbkey=repeat_region NC_008149.1 RefSeq gene 3430610 3431683 . - . ID=gene3211;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=YPN_RS16080;old_locus_tag=YPN_3051 NC_008149.1 Protein Homology CDS 3430610 3431683 . - 0 ID=cds3127;Parent=gene3211;Dbxref=Genbank:WP_002209894.1;Name=WP_002209894.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=WP_002209894.1;transl_table=11 NC_008149.1 RefSeq gene 3431955 3433214 . + . ID=gene3212;Name=YPN_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16085;old_locus_tag=YPN_3052 NC_008149.1 Protein Homology CDS 3431955 3433214 . + 0 ID=cds3128;Parent=gene3212;Dbxref=Genbank:WP_002215759.1;Name=WP_002215759.1;Note=porin involved in the transport of maltose and maltodextrins;gbkey=CDS;product=maltoporin;protein_id=WP_002215759.1;transl_table=11 NC_008149.1 RefSeq gene 3433587 3433898 . - . ID=gene3213;Name=YPN_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16090;old_locus_tag=YPN_3053 NC_008149.1 Protein Homology CDS 3433587 3433898 . - 0 ID=cds3129;Parent=gene3213;Dbxref=Genbank:WP_002209896.1;Name=WP_002209896.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_002209896.1;transl_table=11 NC_008149.1 RefSeq gene 3434010 3436070 . - . ID=gene3214;Name=YPN_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16095;old_locus_tag=YPN_3054 NC_008149.1 Protein Homology CDS 3434010 3436070 . - 0 ID=cds3130;Parent=gene3214;Dbxref=Genbank:WP_002209897.1;Name=WP_002209897.1;gbkey=CDS;product=beta-galactosidase;protein_id=WP_002209897.1;transl_table=11 NC_008149.1 RefSeq gene 3436121 3437323 . - . ID=gene3215;Name=YPN_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16100;old_locus_tag=YPN_3055 NC_008149.1 Protein Homology CDS 3436121 3437323 . - 0 ID=cds3131;Parent=gene3215;Dbxref=Genbank:WP_002209898.1;Name=WP_002209898.1;gbkey=CDS;product=galactosidase;protein_id=WP_002209898.1;transl_table=11 NC_008149.1 RefSeq gene 3437328 3438179 . - . ID=gene3216;Name=YPN_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16105;old_locus_tag=YPN_3056 NC_008149.1 Protein Homology CDS 3437328 3438179 . - 0 ID=cds3132;Parent=gene3216;Dbxref=Genbank:WP_002209899.1;Name=WP_002209899.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209899.1;transl_table=11 NC_008149.1 RefSeq gene 3438191 3439498 . - . ID=gene3217;Name=YPN_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16110;old_locus_tag=YPN_3057 NC_008149.1 Protein Homology CDS 3438191 3439498 . - 0 ID=cds3133;Parent=gene3217;Dbxref=Genbank:WP_002209900.1;Name=WP_002209900.1;gbkey=CDS;product=arabinogalactan ABC transporter permease;protein_id=WP_002209900.1;transl_table=11 NC_008149.1 RefSeq gene 3439658 3440893 . - . ID=gene3218;Name=YPN_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16115;old_locus_tag=YPN_3058 NC_008149.1 Protein Homology CDS 3439658 3440893 . - 0 ID=cds3134;Parent=gene3218;Dbxref=Genbank:WP_002209901.1;Name=WP_002209901.1;gbkey=CDS;product=cyclodextrin-binding protein;protein_id=WP_002209901.1;transl_table=11 NC_008149.1 RefSeq gene 3441256 3442362 . + . ID=gene3219;Name=YPN_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16120;old_locus_tag=YPN_3059 NC_008149.1 Protein Homology CDS 3441256 3442362 . + 0 ID=cds3135;Parent=gene3219;Dbxref=Genbank:WP_002223743.1;Name=WP_002223743.1;gbkey=CDS;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002223743.1;transl_table=11 NC_008149.1 RefSeq gene 3442911 3444419 . + . ID=gene3220;Name=YPN_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16125;old_locus_tag=YPN_3060 NC_008149.1 Protein Homology CDS 3442911 3444419 . + 0 ID=cds3136;Parent=gene3220;Dbxref=Genbank:WP_002209903.1;Name=WP_002209903.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=enolase;protein_id=WP_002209903.1;transl_table=11 NC_008149.1 RefSeq gene 3444491 3445495 . + . ID=gene3221;Name=YPN_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16130;old_locus_tag=YPN_3061 NC_008149.1 Protein Homology CDS 3444491 3445495 . + 0 ID=cds3137;Parent=gene3221;Dbxref=Genbank:WP_002209904.1;Name=WP_002209904.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002209904.1;transl_table=11 NC_008149.1 RefSeq gene 3445930 3446931 . + . ID=gene3222;Name=YPN_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16135;old_locus_tag=YPN_3062 NC_008149.1 Protein Homology CDS 3445930 3446931 . + 0 ID=cds3138;Parent=gene3222;Dbxref=Genbank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002209906.1;transl_table=11 NC_008149.1 RefSeq gene 3447710 3448228 . + . ID=gene3223;Name=YPN_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16140;old_locus_tag=YPN_3063 NC_008149.1 Protein Homology CDS 3447710 3448228 . + 0 ID=cds3139;Parent=gene3223;Dbxref=Genbank:WP_002209907.1;Name=WP_002209907.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209907.1;transl_table=11 NC_008149.1 RefSeq gene 3448604 3449461 . + . ID=gene3224;Name=YPN_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16145;old_locus_tag=YPN_3064 NC_008149.1 Protein Homology CDS 3448604 3449461 . + 0 ID=cds3140;Parent=gene3224;Dbxref=Genbank:WP_002209908.1;Name=WP_002209908.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209908.1;transl_table=11 NC_008149.1 RefSeq gene 3449885 3450565 . + . ID=gene3225;Name=YPN_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16150;old_locus_tag=YPN_3065 NC_008149.1 Protein Homology CDS 3449885 3450565 . + 0 ID=cds3141;Parent=gene3225;Dbxref=Genbank:WP_002209909.1;Name=WP_002209909.1;gbkey=CDS;product=PadR family transcriptional regulator;protein_id=WP_002209909.1;transl_table=11 NC_008149.1 RefSeq gene 3450565 3450885 . + . ID=gene3226;Name=YPN_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16155;old_locus_tag=YPN_3066 NC_008149.1 Protein Homology CDS 3450565 3450885 . + 0 ID=cds3142;Parent=gene3226;Dbxref=Genbank:WP_002209910.1;Name=WP_002209910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209910.1;transl_table=11 NC_008149.1 RefSeq gene 3450968 3451234 . - . ID=gene3227;Name=YPN_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16160;old_locus_tag=YPN_3067 NC_008149.1 Protein Homology CDS 3450968 3451234 . - 0 ID=cds3143;Parent=gene3227;Dbxref=Genbank:WP_002209911.1;Name=WP_002209911.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209911.1;transl_table=11 NC_008149.1 RefSeq gene 3451490 3452269 . - . ID=gene3228;Name=YPN_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16165;old_locus_tag=YPN_3068 NC_008149.1 Protein Homology CDS 3451490 3452269 . - 0 ID=cds3144;Parent=gene3228;Dbxref=Genbank:WP_002209912.1;Name=WP_002209912.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209912.1;transl_table=11 NC_008149.1 RefSeq gene 3452350 3452562 . - . ID=gene3229;Name=YPN_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16170 NC_008149.1 Protein Homology CDS 3452350 3452562 . - 0 ID=cds3145;Parent=gene3229;Dbxref=Genbank:WP_002214799.1;Name=WP_002214799.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214799.1;transl_table=11 NC_008149.1 RefSeq gene 3452874 3453641 . - . ID=gene3230;Name=YPN_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16175;old_locus_tag=YPN_3069 NC_008149.1 Protein Homology CDS 3452874 3453641 . - 0 ID=cds3146;Parent=gene3230;Dbxref=Genbank:WP_002209913.1;Name=WP_002209913.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209913.1;transl_table=11 NC_008149.1 RefSeq gene 3453611 3455770 . - . ID=gene3231;Name=YPN_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16180;old_locus_tag=YPN_3070 NC_008149.1 Protein Homology CDS 3453611 3455770 . - 0 ID=cds3147;Parent=gene3231;Dbxref=Genbank:WP_002209914.1;Name=WP_002209914.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209914.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3456007 3456370 . + . ID=id271;gbkey=repeat_region NC_008149.1 RefSeq gene 3456180 3456464 . - . ID=gene3232;Name=YPN_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16185 NC_008149.1 Protein Homology CDS 3456180 3456464 . - 0 ID=cds3148;Parent=gene3232;Dbxref=Genbank:WP_002214798.1;Name=WP_002214798.1;gbkey=CDS;product=colicin immunity protein;protein_id=WP_002214798.1;transl_table=11 NC_008149.1 RefSeq gene 3456511 3456714 . - . ID=gene3233;Name=YPN_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16190 NC_008149.1 Protein Homology CDS 3456511 3456714 . - 0 ID=cds3149;Parent=gene3233;Dbxref=Genbank:WP_002209915.1;Name=WP_002209915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209915.1;transl_table=11 NC_008149.1 RefSeq gene 3457087 3457281 . - . ID=gene3234;Name=YPN_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16195;old_locus_tag=YPN_3071 NC_008149.1 Protein Homology CDS 3457087 3457281 . - 0 ID=cds3150;Parent=gene3234;Dbxref=Genbank:WP_002214795.1;Name=WP_002214795.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214795.1;transl_table=11 NC_008149.1 RefSeq gene 3457278 3458816 . - . ID=gene3235;Name=YPN_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16200;old_locus_tag=YPN_3072 NC_008149.1 Protein Homology CDS 3457278 3458816 . - 0 ID=cds3151;Parent=gene3235;Dbxref=Genbank:WP_002214794.1;Name=WP_002214794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214794.1;transl_table=11 NC_008149.1 RefSeq gene 3459323 3460465 . - . ID=gene3236;Name=YPN_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16205;old_locus_tag=YPN_3073 NC_008149.1 Protein Homology CDS 3459323 3460465 . - 0 ID=cds3152;Parent=gene3236;Dbxref=Genbank:WP_002209918.1;Name=WP_002209918.1;gbkey=CDS;product=Fic family protein;protein_id=WP_002209918.1;transl_table=11 NC_008149.1 RefSeq gene 3460734 3461099 . + . ID=gene3237;Name=YPN_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16210;old_locus_tag=YPN_3074 NC_008149.1 Protein Homology CDS 3460734 3461099 . + 0 ID=cds3153;Parent=gene3237;Dbxref=Genbank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11 NC_008149.1 RefSeq gene 3461112 3461348 . + . ID=gene3238;Name=YPN_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16215;old_locus_tag=YPN_3075 NC_008149.1 Protein Homology CDS 3461112 3461348 . + 0 ID=cds3154;Parent=gene3238;Dbxref=Genbank:WP_002214792.1;Name=WP_002214792.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214792.1;transl_table=11 NC_008149.1 RefSeq gene 3461354 3461686 . + . ID=gene3239;Name=YPN_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16220;old_locus_tag=YPN_3076 NC_008149.1 Protein Homology CDS 3461354 3461686 . + 0 ID=cds3155;Parent=gene3239;Dbxref=Genbank:WP_002214791.1;Name=WP_002214791.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214791.1;transl_table=11 NC_008149.1 RefSeq gene 3461868 3462068 . + . ID=gene3240;Name=YPN_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16225;old_locus_tag=YPN_3077 NC_008149.1 Protein Homology CDS 3461868 3462068 . + 0 ID=cds3156;Parent=gene3240;Dbxref=Genbank:WP_002209920.1;Name=WP_002209920.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209920.1;transl_table=11 NC_008149.1 RefSeq gene 3462082 3462234 . - . ID=gene3241;Name=YPN_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16230 NC_008149.1 Protein Homology CDS 3462082 3462234 . - 0 ID=cds3157;Parent=gene3241;Dbxref=Genbank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11 NC_008149.1 RefSeq gene 3462227 3462553 . - . ID=gene3242;Name=YPN_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16235;old_locus_tag=YPN_3078 NC_008149.1 Protein Homology CDS 3462227 3462553 . - 0 ID=cds3158;Parent=gene3242;Dbxref=Genbank:WP_002209922.1;Name=WP_002209922.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209922.1;transl_table=11 NC_008149.1 RefSeq gene 3462853 3465144 . + . ID=gene3243;Name=YPN_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16240;old_locus_tag=YPN_3079 NC_008149.1 Protein Homology CDS 3462853 3465144 . + 0 ID=cds3159;Parent=gene3243;Dbxref=Genbank:WP_002209923.1;Name=WP_002209923.1;gbkey=CDS;product=DNA primase;protein_id=WP_002209923.1;transl_table=11 NC_008149.1 RefSeq gene 3465544 3465942 . - . ID=gene3244;Name=YPN_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16245;old_locus_tag=YPN_3080 NC_008149.1 Protein Homology CDS 3465544 3465942 . - 0 ID=cds3160;Parent=gene3244;Dbxref=Genbank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;product=antitoxin;protein_id=WP_002209924.1;transl_table=11 NC_008149.1 RefSeq gene 3465942 3466238 . - . ID=gene3245;Name=YPN_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16250;old_locus_tag=YPN_3081 NC_008149.1 Protein Homology CDS 3465942 3466238 . - 0 ID=cds3161;Parent=gene3245;Dbxref=Genbank:WP_002214787.1;Name=WP_002214787.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214787.1;transl_table=11 NC_008149.1 RefSeq gene 3466402 3466764 . - . ID=gene3246;Name=YPN_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16255;old_locus_tag=YPN_3082 NC_008149.1 Protein Homology CDS 3466402 3466764 . - 0 ID=cds3162;Parent=gene3246;Dbxref=Genbank:WP_002209925.1;Name=WP_002209925.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209925.1;transl_table=11 NC_008149.1 RefSeq gene 3466827 3467087 . - . ID=gene3247;Name=YPN_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16260;old_locus_tag=YPN_3083 NC_008149.1 Protein Homology CDS 3466827 3467087 . - 0 ID=cds3163;Parent=gene3247;Dbxref=Genbank:WP_002214785.1;Name=WP_002214785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214785.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3467046 3467301 . + . ID=id272;gbkey=repeat_region NC_008149.1 RefSeq gene 3467459 3467584 . + . ID=gene3248;Name=YPN_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16265;old_locus_tag=YPN_3084 NC_008149.1 Protein Homology CDS 3467459 3467584 . + 0 ID=cds3164;Parent=gene3248;Dbxref=Genbank:WP_002214784.1;Name=WP_002214784.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214784.1;transl_table=11 NC_008149.1 RefSeq gene 3467685 3467870 . + . ID=gene3249;Name=YPN_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16270;old_locus_tag=YPN_3085 NC_008149.1 Protein Homology CDS 3467685 3467870 . + 0 ID=cds3165;Parent=gene3249;Dbxref=Genbank:WP_002209928.1;Name=WP_002209928.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209928.1;transl_table=11 NC_008149.1 RefSeq gene 3467952 3469166 . - . ID=gene3250;Name=YPN_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16275;old_locus_tag=YPN_3086 NC_008149.1 Protein Homology CDS 3467952 3469166 . - 0 ID=cds3166;Parent=gene3250;Dbxref=Genbank:WP_002209929.1;Name=WP_002209929.1;gbkey=CDS;product=integrase;protein_id=WP_002209929.1;transl_table=11 NC_008149.1 RefSeq gene 3469332 3469405 . - . ID=gene3251;Name=YPN_RS16280;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS16280;old_locus_tag=YPN_r094 NC_008149.1 tRNAscan-SE tRNA 3469332 3469405 . - . ID=rna80;Parent=gene3251;anticodon=(pos:complement(3469371..3469373));gbkey=tRNA;product=tRNA-Gly NC_008149.1 tRNAscan-SE exon 3469332 3469405 . - . ID=id273;Parent=rna80;anticodon=(pos:complement(3469371..3469373));gbkey=tRNA;product=tRNA-Gly NC_008149.1 RefSeq gene 3469599 3471116 . - . ID=gene3252;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=YPN_RS16285;old_locus_tag=YPN_3087 NC_008149.1 Protein Homology CDS 3469599 3471116 . - 0 ID=cds3167;Parent=gene3252;Dbxref=Genbank:WP_002209930.1;Name=WP_002209930.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11 NC_008149.1 RefSeq gene 3471126 3472058 . - . ID=gene3253;Name=YPN_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16290;old_locus_tag=YPN_3088 NC_008149.1 Protein Homology CDS 3471126 3472058 . - 0 ID=cds3168;Parent=gene3253;Dbxref=Genbank:WP_002231350.1;Name=WP_002231350.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_002231350.1;transl_table=11 NC_008149.1 RefSeq gene 3472403 3474136 . - . ID=gene3254;Name=YPN_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16295;old_locus_tag=YPN_3089 NC_008149.1 Protein Homology CDS 3472403 3474136 . - 0 ID=cds3169;Parent=gene3254;Dbxref=Genbank:WP_002209931.1;Name=WP_002209931.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_002209931.1;transl_table=11 NC_008149.1 RefSeq gene 3474143 3474859 . - . ID=gene3255;Name=YPN_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16300;old_locus_tag=YPN_3090 NC_008149.1 Protein Homology CDS 3474143 3474859 . - 0 ID=cds3170;Parent=gene3255;Dbxref=Genbank:WP_002209932.1;Name=WP_002209932.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;product=thiol:disulfide interchange protein DsbC;protein_id=WP_002209932.1;transl_table=11 NC_008149.1 RefSeq gene 3474890 3475789 . - . ID=gene3256;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=YPN_RS16305;old_locus_tag=YPN_3091 NC_008149.1 Protein Homology CDS 3474890 3475789 . - 0 ID=cds3171;Parent=gene3256;Dbxref=Genbank:WP_002209933.1;Name=WP_002209933.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11 NC_008149.1 RefSeq gene 3475896 3476414 . + . ID=gene3257;Name=YPN_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16310;old_locus_tag=YPN_3092 NC_008149.1 Protein Homology CDS 3475896 3476414 . + 0 ID=cds3172;Parent=gene3257;Dbxref=Genbank:WP_002209934.1;Name=WP_002209934.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;gbkey=CDS;product=flavodoxin;protein_id=WP_002209934.1;transl_table=11 NC_008149.1 RefSeq gene 3476504 3477961 . - . ID=gene3258;Name=YPN_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16315;old_locus_tag=YPN_3093 NC_008149.1 Protein Homology CDS 3476504 3477961 . - 0 ID=cds3173;Parent=gene3258;Dbxref=Genbank:WP_002220113.1;Name=WP_002220113.1;gbkey=CDS;product=membrane protein;protein_id=WP_002220113.1;transl_table=11 NC_008149.1 RefSeq gene 3478082 3479500 . - . ID=gene3259;Name=YPN_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16320;old_locus_tag=YPN_3094 NC_008149.1 Protein Homology CDS 3478082 3479500 . - 0 ID=cds3174;Parent=gene3259;Dbxref=Genbank:WP_002209936.1;Name=WP_002209936.1;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002209936.1;transl_table=11 NC_008149.1 RefSeq gene 3479525 3480223 . - . ID=gene3260;Name=YPN_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16325;old_locus_tag=YPN_3095 NC_008149.1 Protein Homology CDS 3479525 3480223 . - 0 ID=cds3175;Parent=gene3260;Dbxref=Genbank:WP_002209937.1;Name=WP_002209937.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209937.1;transl_table=11 NC_008149.1 RefSeq gene 3480223 3480648 . - . ID=gene3261;Name=YPN_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16330;old_locus_tag=YPN_3096 NC_008149.1 Protein Homology CDS 3480223 3480648 . - 0 ID=cds3176;Parent=gene3261;Dbxref=Genbank:WP_002215144.1;Name=WP_002215144.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215144.1;transl_table=11 NC_008149.1 RefSeq gene 3480629 3480895 . - . ID=gene3262;Name=YPN_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16335;old_locus_tag=YPN_3097 NC_008149.1 Protein Homology CDS 3480629 3480895 . - 0 ID=cds3177;Parent=gene3262;Dbxref=Genbank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209939.1;transl_table=11 NC_008149.1 RefSeq gene 3481212 3482204 . + . ID=gene3263;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=YPN_RS16340;old_locus_tag=YPN_3098 NC_008149.1 Protein Homology CDS 3481212 3482204 . + 0 ID=cds3178;Parent=gene3263;Dbxref=Genbank:WP_002209940.1;Name=WP_002209940.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor;gbkey=CDS;gene=ygfZ;product=tRNA-modifying protein YgfZ;protein_id=WP_002209940.1;transl_table=11 NC_008149.1 RefSeq gene 3482277 3482774 . - . ID=gene3264;Name=YPN_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16345;old_locus_tag=YPN_3099 NC_008149.1 Protein Homology CDS 3482277 3482774 . - 0 ID=cds3179;Parent=gene3264;Dbxref=Genbank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209941.1;transl_table=11 NC_008149.1 RefSeq gene 3483032 3483733 . - . ID=gene3265;Name=YPN_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16350;old_locus_tag=YPN_3100 NC_008149.1 Protein Homology CDS 3483032 3483733 . - 0 ID=cds3180;Parent=gene3265;Dbxref=Genbank:WP_002209942.1;Name=WP_002209942.1;gbkey=CDS;product=hemolysin III;protein_id=WP_002209942.1;transl_table=11 NC_008149.1 RefSeq gene 3483935 3485038 . - . ID=gene3266;Name=YPN_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16355;old_locus_tag=YPN_3101 NC_008149.1 Protein Homology CDS 3483935 3485038 . - 0 ID=cds3181;Parent=gene3266;Dbxref=Genbank:WP_002209943.1;Name=WP_002209943.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209943.1;transl_table=11 NC_008149.1 RefSeq gene 3485142 3487118 . - . ID=gene3267;Name=YPN_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16360;old_locus_tag=YPN_3102 NC_008149.1 Protein Homology CDS 3485142 3487118 . - 0 ID=cds3182;Parent=gene3267;Dbxref=Genbank:WP_002215142.1;Name=WP_002215142.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215142.1;transl_table=11 NC_008149.1 RefSeq gene 3487115 3487267 . - . ID=gene3268;Name=YPN_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16365 NC_008149.1 Protein Homology CDS 3487115 3487267 . - 0 ID=cds3183;Parent=gene3268;Dbxref=Genbank:WP_002209944.1;Name=WP_002209944.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002209944.1;transl_table=11 NC_008149.1 RefSeq gene 3488328 3488765 . - . ID=gene3269;Name=YPN_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16370;old_locus_tag=YPN_3103 NC_008149.1 Protein Homology CDS 3488328 3488765 . - 0 ID=cds3184;Parent=gene3269;Dbxref=Genbank:WP_002209946.1;Name=WP_002209946.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209946.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3488936 3489109 . + . ID=id274;gbkey=repeat_region NC_008149.1 RefSeq gene 3489143 3492022 . - . ID=gene3270;Name=YPN_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16375;old_locus_tag=YPN_3104 NC_008149.1 Protein Homology CDS 3489143 3492022 . - 0 ID=cds3185;Parent=gene3270;Dbxref=Genbank:WP_002209947.1;Name=WP_002209947.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=WP_002209947.1;transl_table=11 NC_008149.1 RefSeq gene 3492234 3492620 . - . ID=gene3271;Name=YPN_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16380;old_locus_tag=YPN_3105 NC_008149.1 Protein Homology CDS 3492234 3492620 . - 0 ID=cds3186;Parent=gene3271;Dbxref=Genbank:WP_002209948.1;Name=WP_002209948.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;product=glycine cleavage system protein H;protein_id=WP_002209948.1;transl_table=11 NC_008149.1 RefSeq gene 3492689 3493786 . - . ID=gene3272;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=YPN_RS16385;old_locus_tag=YPN_3106 NC_008149.1 Protein Homology CDS 3492689 3493786 . - 0 ID=cds3187;Parent=gene3272;Dbxref=Genbank:WP_002209949.1;Name=WP_002209949.1;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=WP_002209949.1;transl_table=11 NC_008149.1 RefSeq gene 3494507 3495727 . - . ID=gene3273;Name=YPN_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16390;old_locus_tag=YPN_3107 NC_008149.1 Protein Homology CDS 3494507 3495727 . - 0 ID=cds3188;Parent=gene3273;Dbxref=Genbank:WP_002209950.1;Name=WP_002209950.1;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209950.1;transl_table=11 NC_008149.1 RefSeq gene 3495900 3497078 . - . ID=gene3274;Name=YPN_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16395;old_locus_tag=YPN_3108 NC_008149.1 Protein Homology CDS 3495900 3497078 . - 0 ID=cds3189;Parent=gene3274;Dbxref=Genbank:WP_002209951.1;Name=WP_002209951.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209951.1;transl_table=11 NC_008149.1 RefSeq gene 3497147 3498460 . - . ID=gene3275;Name=YPN_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16400;old_locus_tag=YPN_3109 NC_008149.1 Protein Homology CDS 3497147 3498460 . - 0 ID=cds3190;Parent=gene3275;Dbxref=Genbank:WP_002209952.1;Name=WP_002209952.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;product=proline aminopeptidase P II;protein_id=WP_002209952.1;transl_table=11 NC_008149.1 RefSeq gene 3498548 3499126 . - . ID=gene3276;Name=YPN_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16405;old_locus_tag=YPN_3110 NC_008149.1 Protein Homology CDS 3498548 3499126 . - 0 ID=cds3191;Parent=gene3276;Dbxref=Genbank:WP_002209953.1;Name=WP_002209953.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209953.1;transl_table=11 NC_008149.1 RefSeq gene 3499463 3499792 . + . ID=gene3277;Name=YPN_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16410;old_locus_tag=YPN_3111 NC_008149.1 Protein Homology CDS 3499463 3499792 . + 0 ID=cds3192;Parent=gene3277;Dbxref=Genbank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11 NC_008149.1 RefSeq gene 3500156 3500752 . + . ID=gene3278;Name=YPN_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16415;old_locus_tag=YPN_3112 NC_008149.1 Protein Homology CDS 3500156 3500752 . + 0 ID=cds3193;Parent=gene3278;Dbxref=Genbank:WP_002209955.1;Name=WP_002209955.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_002209955.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3500803 3500975 . + . ID=id275;gbkey=repeat_region NC_008149.1 RefSeq gene 3501017 3502258 . - . ID=gene3279;Name=YPN_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16420;old_locus_tag=YPN_3113 NC_008149.1 Protein Homology CDS 3501017 3502258 . - 0 ID=cds3194;Parent=gene3279;Dbxref=Genbank:WP_002209956.1;Name=WP_002209956.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11 NC_008149.1 RefSeq gene 3502565 3503221 . - . ID=gene3280;Name=YPN_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16425;old_locus_tag=YPN_3114 NC_008149.1 Protein Homology CDS 3502565 3503221 . - 0 ID=cds3195;Parent=gene3280;Dbxref=Genbank:WP_002209957.1;Name=WP_002209957.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;product=ribose-5-phosphate isomerase A 1;protein_id=WP_002209957.1;transl_table=11 NC_008149.1 RefSeq gene 3503563 3504471 . + . ID=gene3281;Name=YPN_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16430;old_locus_tag=YPN_3115 NC_008149.1 Protein Homology CDS 3503563 3504471 . + 0 ID=cds3196;Parent=gene3281;Dbxref=Genbank:WP_002209958.1;Name=WP_002209958.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;product=chromosome initiation inhibitor;protein_id=WP_002209958.1;transl_table=11 NC_008149.1 RefSeq gene 3504482 3505261 . - . ID=gene3282;Name=YPN_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16435;old_locus_tag=YPN_3116 NC_008149.1 Protein Homology CDS 3504482 3505261 . - 0 ID=cds3197;Parent=gene3282;Dbxref=Genbank:WP_002209959.1;Name=WP_002209959.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209959.1;transl_table=11 NC_008149.1 RefSeq gene 3505451 3506068 . - . ID=gene3283;Name=YPN_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16440;old_locus_tag=YPN_3117 NC_008149.1 Protein Homology CDS 3505451 3506068 . - 0 ID=cds3198;Parent=gene3283;Dbxref=Genbank:WP_002209960.1;Name=WP_002209960.1;Note=Involved in the export of arginine;gbkey=CDS;product=arginine exporter protein ArgO;protein_id=WP_002209960.1;transl_table=11 NC_008149.1 RefSeq gene 3506331 3507200 . - . ID=gene3284;Name=YPN_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16445;old_locus_tag=YPN_3118 NC_008149.1 Protein Homology CDS 3506331 3507200 . - 0 ID=cds3199;Parent=gene3284;Dbxref=Genbank:WP_002209961.1;Name=WP_002209961.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;product=mechanosensitive ion channel protein MscS;protein_id=WP_002209961.1;transl_table=11 NC_008149.1 RefSeq gene 3507316 3507606 . + . ID=gene3285;Name=YPN_RS16450;gbkey=Gene;gene_biotype=other;locus_tag=YPN_RS16450 NC_008149.1 RefSeq repeat_region 3507426 3507596 . + . ID=id276;gbkey=repeat_region NC_008149.1 RefSeq gene 3507638 3508717 . - . ID=gene3286;Name=YPN_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16455;old_locus_tag=YPN_3119 NC_008149.1 Protein Homology CDS 3507638 3508717 . - 0 ID=cds3200;Parent=gene3286;Dbxref=Genbank:WP_002209962.1;Name=WP_002209962.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_002209962.1;transl_table=11 NC_008149.1 RefSeq gene 3508837 3510000 . - . ID=gene3287;Name=YPN_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16460;old_locus_tag=YPN_3120 NC_008149.1 Protein Homology CDS 3508837 3510000 . - 0 ID=cds3201;Parent=gene3287;Dbxref=Genbank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11 NC_008149.1 RefSeq gene 3510103 3511119 . - . ID=gene3288;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=YPN_RS16465;old_locus_tag=YPN_3121 NC_008149.1 Protein Homology CDS 3510103 3511119 . - 0 ID=cds3202;Parent=gene3288;Dbxref=Genbank:WP_002209964.1;Name=WP_002209964.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;product=D-erythrose-4-phosphate dehydrogenase;protein_id=WP_002209964.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3511349 3512070 . + . ID=id277;gbkey=repeat_region NC_008149.1 RefSeq gene 3511460 3511969 . - . ID=gene3289;Name=YPN_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16470;old_locus_tag=YPN_3122 NC_008149.1 Protein Homology CDS 3511460 3511969 . - 0 ID=cds3203;Parent=gene3289;Dbxref=Genbank:WP_002208492.1;Name=WP_002208492.1;gbkey=CDS;product=transposase;protein_id=WP_002208492.1;transl_table=11 NC_008149.1 RefSeq gene 3512226 3514220 . - . ID=gene3290;Name=YPN_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16475;old_locus_tag=YPN_3123 NC_008149.1 Protein Homology CDS 3512226 3514220 . - 0 ID=cds3204;Parent=gene3290;Dbxref=Genbank:WP_002209965.1;Name=WP_002209965.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_002209965.1;transl_table=11 NC_008149.1 RefSeq gene 3514711 3515463 . + . ID=gene3291;Name=YPN_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16480;old_locus_tag=YPN_3124 NC_008149.1 Protein Homology CDS 3514711 3515463 . + 0 ID=cds3205;Parent=gene3291;Dbxref=Genbank:WP_002209967.1;Name=WP_002209967.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002209967.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3515510 3515680 . + . ID=id278;gbkey=repeat_region NC_008149.1 RefSeq gene 3515753 3516073 . - . ID=gene3292;Name=YPN_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16485;old_locus_tag=YPN_3125 NC_008149.1 Protein Homology CDS 3515753 3516073 . - 0 ID=cds3206;Parent=gene3292;Dbxref=Genbank:WP_002209968.1;Name=WP_002209968.1;gbkey=CDS;product=(2Fe-2S)-binding protein;protein_id=WP_002209968.1;transl_table=11 NC_008149.1 RefSeq gene 3516233 3518212 . - . ID=gene3293;Name=YPN_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16490;old_locus_tag=YPN_3126 NC_008149.1 Protein Homology CDS 3516233 3518212 . - 0 ID=cds3207;Parent=gene3293;Dbxref=Genbank:WP_002209969.1;Name=WP_002209969.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11 NC_008149.1 RefSeq gene 3519419 3520573 . + . ID=gene3294;Name=YPN_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16495;old_locus_tag=YPN_3127 NC_008149.1 Protein Homology CDS 3519419 3520573 . + 0 ID=cds3208;Parent=gene3294;Dbxref=Genbank:WP_002209971.1;Name=WP_002209971.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthase;protein_id=WP_002209971.1;transl_table=11 NC_008149.1 RefSeq gene 3520766 3521278 . + . ID=gene3295;Name=YPN_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16500;old_locus_tag=YPN_3128 NC_008149.1 Protein Homology CDS 3520766 3521278 . + 0 ID=cds3209;Parent=gene3295;Dbxref=Genbank:WP_002228653.1;Name=WP_002228653.1;gbkey=CDS;product=Zn-dependent metalloprotease;protein_id=WP_002228653.1;transl_table=11 NC_008149.1 RefSeq gene 3521376 3522083 . + . ID=gene3296;Name=YPN_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16505;old_locus_tag=YPN_3129 NC_008149.1 Protein Homology CDS 3521376 3522083 . + 0 ID=cds3210;Parent=gene3296;Dbxref=Genbank:WP_002209973.1;Name=WP_002209973.1;gbkey=CDS;product=endonuclease;protein_id=WP_002209973.1;transl_table=11 NC_008149.1 RefSeq gene 3522344 3523075 . + . ID=gene3297;Name=YPN_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16510;old_locus_tag=YPN_3131 NC_008149.1 Protein Homology CDS 3522344 3523075 . + 0 ID=cds3211;Parent=gene3297;Dbxref=Genbank:WP_002209975.1;Name=WP_002209975.1;gbkey=CDS;product=16S rRNA methyltransferase;protein_id=WP_002209975.1;transl_table=11 NC_008149.1 RefSeq gene 3523101 3524060 . + . ID=gene3298;Name=YPN_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16515;old_locus_tag=YPN_3132 NC_008149.1 Protein Homology CDS 3523101 3524060 . + 0 ID=cds3212;Parent=gene3298;Dbxref=Genbank:WP_002209976.1;Name=WP_002209976.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_002209976.1;transl_table=11 NC_008149.1 RefSeq gene 3524176 3524739 . + . ID=gene3299;Name=YPN_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16520;old_locus_tag=YPN_3133 NC_008149.1 Protein Homology CDS 3524176 3524739 . + 0 ID=cds3213;Parent=gene3299;Dbxref=Genbank:WP_002209977.1;Name=WP_002209977.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209977.1;transl_table=11 NC_008149.1 RefSeq gene 3524739 3525161 . + . ID=gene3300;Name=YPN_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16525;old_locus_tag=YPN_3134 NC_008149.1 Protein Homology CDS 3524739 3525161 . + 0 ID=cds3214;Parent=gene3300;Dbxref=Genbank:WP_002209978.1;Name=WP_002209978.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction DNA helicase;protein_id=WP_002209978.1;transl_table=11 NC_008149.1 RefSeq gene 3525341 3526225 . + . ID=gene3301;Name=YPN_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16530;old_locus_tag=YPN_3135 NC_008149.1 Protein Homology CDS 3525341 3526225 . + 0 ID=cds3215;Parent=gene3301;Dbxref=Genbank:WP_002209979.1;Name=WP_002209979.1;gbkey=CDS;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11 NC_008149.1 RefSeq gene 3526229 3527344 . + . ID=gene3302;Name=YPN_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16535;old_locus_tag=YPN_3136 NC_008149.1 Protein Homology CDS 3526229 3527344 . + 0 ID=cds3216;Parent=gene3302;Dbxref=Genbank:WP_002209980.1;Name=WP_002209980.1;Note=catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis;gbkey=CDS;product=agmatine deiminase;protein_id=WP_002209980.1;transl_table=11 NC_008149.1 RefSeq gene 3527453 3528577 . - . ID=gene3303;Name=YPN_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16540;old_locus_tag=YPN_3137 NC_008149.1 Protein Homology CDS 3527453 3528577 . - 0 ID=cds3217;Parent=gene3303;Dbxref=Genbank:WP_002228654.1;Name=WP_002228654.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228654.1;transl_table=11 NC_008149.1 RefSeq gene 3528597 3529295 . + . ID=gene3304;Name=YPN_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16545;old_locus_tag=YPN_3138 NC_008149.1 Protein Homology CDS 3528597 3529295 . + 0 ID=cds3218;Parent=gene3304;Dbxref=Genbank:WP_002215609.1;Name=WP_002215609.1;gbkey=CDS;product=YggS family pyridoxal phosphate enzyme;protein_id=WP_002215609.1;transl_table=11 NC_008149.1 RefSeq gene 3529428 3530249 . + . ID=gene3305;Name=YPN_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16550;old_locus_tag=YPN_3139 NC_008149.1 Protein Homology CDS 3529428 3530249 . + 0 ID=cds3219;Parent=gene3305;Dbxref=Genbank:WP_002209983.1;Name=WP_002209983.1;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=WP_002209983.1;transl_table=11 NC_008149.1 RefSeq gene 3530537 3531091 . + . ID=gene3306;Name=YPN_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16555;old_locus_tag=YPN_3140 NC_008149.1 Protein Homology CDS 3530537 3531091 . + 0 ID=cds3220;Parent=gene3306;Dbxref=Genbank:WP_002209984.1;Name=WP_002209984.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209984.1;transl_table=11 NC_008149.1 RefSeq gene 3531088 3531378 . + . ID=gene3307;Name=YPN_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16560;old_locus_tag=YPN_3141 NC_008149.1 Protein Homology CDS 3531088 3531378 . + 0 ID=cds3221;Parent=gene3307;Dbxref=Genbank:WP_002215612.1;Name=WP_002215612.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215612.1;transl_table=11 NC_008149.1 RefSeq gene 3531478 3532071 . + . ID=gene3308;Name=YPN_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16565;old_locus_tag=YPN_3142 NC_008149.1 Protein Homology CDS 3531478 3532071 . + 0 ID=cds3222;Parent=gene3308;Dbxref=Genbank:WP_002215614.1;Name=WP_002215614.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;product=non-canonical purine NTP pyrophosphatase;protein_id=WP_002215614.1;transl_table=11 NC_008149.1 RefSeq gene 3532064 3533194 . + . ID=gene3309;Name=YPN_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16570;old_locus_tag=YPN_3143 NC_008149.1 Protein Homology CDS 3532064 3533194 . + 0 ID=cds3223;Parent=gene3309;Dbxref=Genbank:WP_002209987.1;Name=WP_002209987.1;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_002209987.1;transl_table=11 NC_008149.1 RefSeq gene 3533384 3542716 . - . ID=gene3310;Name=YPN_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16575;old_locus_tag=YPN_3144 NC_008149.1 Protein Homology CDS 3533384 3542716 . - 0 ID=cds3224;Parent=gene3310;Dbxref=Genbank:WP_002224905.1;Name=WP_002224905.1;gbkey=CDS;product=phage minor structural protein;protein_id=WP_002224905.1;transl_table=11 NC_008149.1 RefSeq gene 3543214 3543444 . - . ID=gene3311;Name=YPN_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16580;old_locus_tag=YPN_3145 NC_008149.1 Protein Homology CDS 3543214 3543444 . - 0 ID=cds3225;Parent=gene3311;Dbxref=Genbank:WP_002228655.1;Name=WP_002228655.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228655.1;transl_table=11 NC_008149.1 RefSeq gene 3543417 3543947 . - . ID=gene3312;Name=YPN_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16585;old_locus_tag=YPN_3146 NC_008149.1 Protein Homology CDS 3543417 3543947 . - 0 ID=cds3226;Parent=gene3312;Dbxref=Genbank:WP_002228656.1;Name=WP_002228656.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228656.1;transl_table=11 NC_008149.1 RefSeq gene 3544059 3544985 . - . ID=gene3313;Name=YPN_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16590;old_locus_tag=YPN_3147 NC_008149.1 Protein Homology CDS 3544059 3544985 . - 0 ID=cds3227;Parent=gene3313;Dbxref=Genbank:WP_002209989.1;Name=WP_002209989.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;product=glutaminase;protein_id=WP_002209989.1;transl_table=11 NC_008149.1 RefSeq gene 3545096 3545422 . - . ID=gene3314;Name=YPN_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16595;old_locus_tag=YPN_3148 NC_008149.1 Protein Homology CDS 3545096 3545422 . - 0 ID=cds3228;Parent=gene3314;Dbxref=Genbank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209990.1;transl_table=11 NC_008149.1 RefSeq gene 3545422 3546141 . - . ID=gene3315;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=YPN_RS16600;old_locus_tag=YPN_3149 NC_008149.1 Protein Homology CDS 3545422 3546141 . - 0 ID=cds3229;Parent=gene3315;Dbxref=Genbank:WP_002209991.1;Name=WP_002209991.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=WP_002209991.1;transl_table=11 NC_008149.1 RefSeq gene 3546479 3547594 . + . ID=gene3316;Name=YPN_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16605;old_locus_tag=YPN_3150 NC_008149.1 Protein Homology CDS 3546479 3547594 . + 0 ID=cds3230;Parent=gene3316;Dbxref=Genbank:WP_002228057.1;Name=WP_002228057.1;gbkey=CDS;product=A/G-specific adenine glycosylase;protein_id=WP_002228057.1;transl_table=11 NC_008149.1 RefSeq gene 3547772 3548044 . + . ID=gene3317;Name=YPN_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16610;old_locus_tag=YPN_3151 NC_008149.1 Protein Homology CDS 3547772 3548044 . + 0 ID=cds3231;Parent=gene3317;Dbxref=Genbank:WP_002209994.1;Name=WP_002209994.1;Note=protects iron-sulfur proteins against oxidative damage;gbkey=CDS;product=Fe(2+)-trafficking protein;protein_id=WP_002209994.1;transl_table=11 NC_008149.1 RefSeq gene 3548227 3549303 . + . ID=gene3318;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=YPN_RS16615;old_locus_tag=YPN_3152 NC_008149.1 Protein Homology CDS 3548227 3549303 . + 0 ID=cds3232;Parent=gene3318;Dbxref=Genbank:WP_002209995.1;Name=WP_002209995.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_002209995.1;transl_table=11 NC_008149.1 RefSeq gene 3549603 3550703 . + . ID=gene3319;Name=YPN_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16620;old_locus_tag=YPN_3153 NC_008149.1 Protein Homology CDS 3549603 3550703 . + 0 ID=cds3233;Parent=gene3319;Dbxref=Genbank:WP_002209997.1;Name=WP_002209997.1;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=WP_002209997.1;transl_table=11 NC_008149.1 RefSeq gene 3550807 3552840 . + . ID=gene3320;Name=YPN_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16625;old_locus_tag=YPN_3154 NC_008149.1 Protein Homology CDS 3550807 3552840 . + 0 ID=cds3234;Parent=gene3320;Dbxref=Genbank:WP_002209998.1;Name=WP_002209998.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002209998.1;transl_table=11 NC_008149.1 RefSeq gene 3552923 3553858 . - . ID=gene3321;Name=YPN_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16630;old_locus_tag=YPN_3155 NC_008149.1 Protein Homology CDS 3552923 3553858 . - 0 ID=cds3235;Parent=gene3321;Dbxref=Genbank:WP_002371953.1;Name=WP_002371953.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002371953.1;transl_table=11 NC_008149.1 RefSeq gene 3553939 3555438 . - . ID=gene3322;Name=YPN_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16635;old_locus_tag=YPN_3156 NC_008149.1 Protein Homology CDS 3553939 3555438 . - 0 ID=cds3236;Parent=gene3322;Dbxref=Genbank:WP_002210000.1;Name=WP_002210000.1;gbkey=CDS;product=lantibiotic ABC transporter permease;protein_id=WP_002210000.1;transl_table=11 NC_008149.1 RefSeq gene 3555484 3556443 . - . ID=gene3323;Name=YPN_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16640;old_locus_tag=YPN_3157 NC_008149.1 Protein Homology CDS 3555484 3556443 . - 0 ID=cds3237;Parent=gene3323;Dbxref=Genbank:WP_002210001.1;Name=WP_002210001.1;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210001.1;transl_table=11 NC_008149.1 RefSeq gene 3556999 3559161 . - . ID=gene3324;Name=YPN_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16645;old_locus_tag=YPN_3158 NC_008149.1 Protein Homology CDS 3556999 3559161 . - 0 ID=cds3238;Parent=gene3324;Dbxref=Genbank:WP_002210002.1;Name=WP_002210002.1;gbkey=CDS;product=ornithine decarboxylase;protein_id=WP_002210002.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3559807 3559910 . + . ID=id279;gbkey=repeat_region NC_008149.1 RefSeq gene 3559830 3559905 . + . ID=gene3325;Name=YPN_RS16650;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS16650;old_locus_tag=YPN_r096 NC_008149.1 tRNAscan-SE tRNA 3559830 3559905 . + . ID=rna81;Parent=gene3325;anticodon=(pos:3559863..3559865);gbkey=tRNA;product=tRNA-Phe NC_008149.1 tRNAscan-SE exon 3559830 3559905 . + . ID=id280;Parent=rna81;anticodon=(pos:3559863..3559865);gbkey=tRNA;product=tRNA-Phe NC_008149.1 RefSeq gene 3560158 3560466 . - . ID=gene3326;Name=YPN_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16655;old_locus_tag=YPN_3160 NC_008149.1 Protein Homology CDS 3560158 3560466 . - 0 ID=cds3239;Parent=gene3326;Dbxref=Genbank:WP_002228972.1;Name=WP_002228972.1;gbkey=CDS;product=integrase;protein_id=WP_002228972.1;transl_table=11 NC_008149.1 RefSeq gene 3560490 3561125 . - . ID=gene3327;Name=YPN_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16660;old_locus_tag=YPN_3161 NC_008149.1 Protein Homology CDS 3560490 3561125 . - 0 ID=cds3240;Parent=gene3327;Dbxref=Genbank:WP_002210005.1;Name=WP_002210005.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210005.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3560526 3561735 . + . ID=id281;gbkey=repeat_region NC_008149.1 RefSeq gene 3561733 3562101 . - . ID=gene3328;Name=YPN_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16665;old_locus_tag=YPN_3162 NC_008149.1 Protein Homology CDS 3561733 3562101 . - 0 ID=cds3241;Parent=gene3328;Dbxref=Genbank:WP_002263919.1;Name=WP_002263919.1;gbkey=CDS;product=transposase;protein_id=WP_002263919.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3561857 3562491 . + . ID=id282;gbkey=repeat_region NC_008149.1 RefSeq gene 3562155 3562277 . - . ID=gene3329;Name=YPN_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16670 NC_008149.1 Protein Homology CDS 3562155 3562277 . - 0 ID=cds3242;Parent=gene3329;Dbxref=Genbank:WP_002210007.1;Name=WP_002210007.1;gbkey=CDS;product=transposase;protein_id=WP_002210007.1;transl_table=11 NC_008149.1 RefSeq gene 3562526 3563293 . - . ID=gene3330;Name=YPN_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16675;old_locus_tag=YPN_3164 NC_008149.1 Protein Homology CDS 3562526 3563293 . - 0 ID=cds3243;Parent=gene3330;Dbxref=Genbank:WP_002210008.1;Name=WP_002210008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210008.1;transl_table=11 NC_008149.1 RefSeq gene 3563280 3565577 . - . ID=gene3331;Name=YPN_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16680;old_locus_tag=YPN_3165 NC_008149.1 Protein Homology CDS 3563280 3565577 . - 0 ID=cds3244;Parent=gene3331;Dbxref=Genbank:WP_002210009.1;Name=WP_002210009.1;gbkey=CDS;product=kinase;protein_id=WP_002210009.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3564111 3566838 . + . ID=id283;gbkey=repeat_region NC_008149.1 RefSeq gene 3565593 3566228 . - . ID=gene3332;Name=YPN_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16685;old_locus_tag=YPN_3166 NC_008149.1 Protein Homology CDS 3565593 3566228 . - 0 ID=cds3245;Parent=gene3332;Dbxref=Genbank:WP_002210010.1;Name=WP_002210010.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210010.1;transl_table=11 NC_008149.1 RefSeq gene 3566760 3567095 . - . ID=gene3333;Name=YPN_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16690 NC_008149.1 Protein Homology CDS 3566760 3567095 . - 0 ID=cds3246;Parent=gene3333;Dbxref=Genbank:WP_002216107.1;Name=WP_002216107.1;gbkey=CDS;product=transposase;protein_id=WP_002216107.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3566852 3567485 . + . ID=id284;gbkey=repeat_region NC_008149.1 RefSeq gene 3567149 3567424 . - . ID=gene3334;Name=YPN_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16695;old_locus_tag=YPN_3167 NC_008149.1 Protein Homology CDS 3567149 3567424 . - 0 ID=cds3247;Parent=gene3334;Dbxref=Genbank:WP_002216108.1;Name=WP_002216108.1;gbkey=CDS;product=transposase;protein_id=WP_002216108.1;transl_table=11 NC_008149.1 RefSeq gene 3567453 3567647 . - . ID=gene3335;Name=YPN_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16700 NC_008149.1 Protein Homology CDS 3567453 3567647 . - 0 ID=cds3248;Parent=gene3335;Dbxref=Genbank:WP_002216110.1;Name=WP_002216110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216110.1;transl_table=11 NC_008149.1 RefSeq gene 3567881 3568237 . - . ID=gene3336;Name=YPN_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16705 NC_008149.1 Protein Homology CDS 3567881 3568237 . - 0 ID=cds3249;Parent=gene3336;Dbxref=Genbank:WP_016257642.1;Name=WP_016257642.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_016257642.1;transl_table=11 NC_008149.1 RefSeq gene 3568381 3570603 . - . ID=gene3337;Name=YPN_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16710;old_locus_tag=YPN_3168 NC_008149.1 Protein Homology CDS 3568381 3570603 . - 0 ID=cds3250;Parent=gene3337;Dbxref=Genbank:WP_002210011.1;Name=WP_002210011.1;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=WP_002210011.1;transl_table=11 NC_008149.1 RefSeq gene 3570618 3572966 . - . ID=gene3338;Name=YPN_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16715;old_locus_tag=YPN_3169 NC_008149.1 Protein Homology CDS 3570618 3572966 . - 0 ID=cds3251;Parent=gene3338;Dbxref=Genbank:WP_002210012.1;Name=WP_002210012.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002210012.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3570703 3571259 . + . ID=id285;gbkey=repeat_region NC_008149.1 RefSeq gene 3572963 3575611 . - . ID=gene3339;Name=YPN_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16720;old_locus_tag=YPN_3170 NC_008149.1 Protein Homology CDS 3572963 3575611 . - 0 ID=cds3252;Parent=gene3339;Dbxref=Genbank:WP_002210013.1;Name=WP_002210013.1;gbkey=CDS;product=ATPase;protein_id=WP_002210013.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3573926 3575630 . + . ID=id286;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 3575953 3582822 . + . ID=id287;gbkey=repeat_region NC_008149.1 RefSeq gene 3576029 3576520 . - . ID=gene3340;Name=YPN_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16725;old_locus_tag=YPN_3171 NC_008149.1 Protein Homology CDS 3576029 3576520 . - 0 ID=cds3253;Parent=gene3340;Dbxref=Genbank:WP_002210014.1;Name=WP_002210014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210014.1;transl_table=11 NC_008149.1 RefSeq gene 3576524 3578261 . - . ID=gene3341;Name=YPN_RS16730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS16730;old_locus_tag=YPN_3172;pseudo=true NC_008149.1 Protein Homology CDS 3576524 3578261 . - 0 ID=cds3254;Parent=gene3341;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 3578261 3578947 . - . ID=gene3342;Name=YPN_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16735;old_locus_tag=YPN_3173 NC_008149.1 Protein Homology CDS 3578261 3578947 . - 0 ID=cds3255;Parent=gene3342;Dbxref=Genbank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210015.1;transl_table=11 NC_008149.1 RefSeq gene 3578944 3580296 . - . ID=gene3343;Name=YPN_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16740;old_locus_tag=YPN_3174 NC_008149.1 Protein Homology CDS 3578944 3580296 . - 0 ID=cds3256;Parent=gene3343;Dbxref=Genbank:WP_002211664.1;Name=WP_002211664.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211664.1;transl_table=11 NC_008149.1 RefSeq gene 3580308 3581852 . - . ID=gene3344;Name=YPN_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16745;old_locus_tag=YPN_3175 NC_008149.1 Protein Homology CDS 3580308 3581852 . - 0 ID=cds3257;Parent=gene3344;Dbxref=Genbank:WP_002215896.1;Name=WP_002215896.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215896.1;transl_table=11 NC_008149.1 RefSeq gene 3581895 3582395 . - . ID=gene3345;Name=YPN_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16750;old_locus_tag=YPN_3176 NC_008149.1 Protein Homology CDS 3581895 3582395 . - 0 ID=cds3258;Parent=gene3345;Dbxref=Genbank:WP_002211662.1;Name=WP_002211662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211662.1;transl_table=11 NC_008149.1 RefSeq gene 3583597 3583752 . - . ID=gene3346;Name=YPN_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16755 NC_008149.1 Protein Homology CDS 3583597 3583752 . - 0 ID=cds3259;Parent=gene3346;Dbxref=Genbank:WP_002211661.1;Name=WP_002211661.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211661.1;transl_table=11 NC_008149.1 RefSeq gene 3583795 3584166 . - . ID=gene3347;Name=YPN_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16760;old_locus_tag=YPN_3177 NC_008149.1 Protein Homology CDS 3583795 3584166 . - 0 ID=cds3260;Parent=gene3347;Dbxref=Genbank:WP_002215898.1;Name=WP_002215898.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215898.1;transl_table=11 NC_008149.1 RefSeq gene 3584340 3584603 . - . ID=gene3348;Name=YPN_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16765;old_locus_tag=YPN_3178 NC_008149.1 Protein Homology CDS 3584340 3584603 . - 0 ID=cds3261;Parent=gene3348;Dbxref=Genbank:WP_002215899.1;Name=WP_002215899.1;gbkey=CDS;product=transposase;protein_id=WP_002215899.1;transl_table=11 NC_008149.1 RefSeq gene 3584671 3585066 . - . ID=gene3349;Name=YPN_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16770;old_locus_tag=YPN_3179 NC_008149.1 Protein Homology CDS 3584671 3585066 . - 0 ID=cds3262;Parent=gene3349;Dbxref=Genbank:WP_002215900.1;Name=WP_002215900.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002215900.1;transl_table=11 NC_008149.1 RefSeq gene 3585517 3586167 . - . ID=gene3350;Name=YPN_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16775;old_locus_tag=YPN_3181 NC_008149.1 Protein Homology CDS 3585517 3586167 . - 0 ID=cds3263;Parent=gene3350;Dbxref=Genbank:WP_002215902.1;Name=WP_002215902.1;gbkey=CDS;product=CAAX amino protease;protein_id=WP_002215902.1;transl_table=11 NC_008149.1 RefSeq gene 3587337 3587987 . + . ID=gene3351;Name=YPN_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16780;old_locus_tag=YPN_3182 NC_008149.1 Protein Homology CDS 3587337 3587987 . + 0 ID=cds3264;Parent=gene3351;Dbxref=Genbank:WP_002215903.1;Name=WP_002215903.1;gbkey=CDS;product=acyl-homoserine-lactone synthase;protein_id=WP_002215903.1;transl_table=11 NC_008149.1 RefSeq gene 3587968 3588711 . - . ID=gene3352;Name=YPN_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16785;old_locus_tag=YPN_3183 NC_008149.1 Protein Homology CDS 3587968 3588711 . - 0 ID=cds3265;Parent=gene3352;Dbxref=Genbank:WP_002211655.1;Name=WP_002211655.1;gbkey=CDS;product=LuxR family transcriptional regulator;protein_id=WP_002211655.1;transl_table=11 NC_008149.1 RefSeq gene 3589273 3590649 . + . ID=gene3353;Name=YPN_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16790;old_locus_tag=YPN_3184 NC_008149.1 Protein Homology CDS 3589273 3590649 . + 0 ID=cds3266;Parent=gene3353;Dbxref=Genbank:WP_002211654.1;Name=WP_002211654.1;gbkey=CDS;product=peptidase;protein_id=WP_002211654.1;transl_table=11 NC_008149.1 RefSeq gene 3591026 3591859 . + . ID=gene3354;Name=YPN_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16795;old_locus_tag=YPN_3185 NC_008149.1 Protein Homology CDS 3591026 3591859 . + 0 ID=cds3267;Parent=gene3354;Dbxref=Genbank:WP_002211652.1;Name=WP_002211652.1;gbkey=CDS;product=dioxygenase;protein_id=WP_002211652.1;transl_table=11 NC_008149.1 RefSeq gene 3592149 3593372 . - . ID=gene3355;Name=YPN_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16800;old_locus_tag=YPN_3186 NC_008149.1 Protein Homology CDS 3592149 3593372 . - 0 ID=cds3268;Parent=gene3355;Dbxref=Genbank:WP_002211651.1;Name=WP_002211651.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211651.1;transl_table=11 NC_008149.1 RefSeq gene 3593512 3594120 . + . ID=gene3356;Name=YPN_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16805;old_locus_tag=YPN_3187 NC_008149.1 Protein Homology CDS 3593512 3594120 . + 0 ID=cds3269;Parent=gene3356;Dbxref=Genbank:WP_002214005.1;Name=WP_002214005.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214005.1;transl_table=11 NC_008149.1 RefSeq gene 3594213 3595283 . + . ID=gene3357;Name=YPN_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16810;old_locus_tag=YPN_3188 NC_008149.1 Protein Homology CDS 3594213 3595283 . + 0 ID=cds3270;Parent=gene3357;Dbxref=Genbank:WP_002228662.1;Name=WP_002228662.1;gbkey=CDS;product=aerobactin siderophore biosynthesis proteiniucA;protein_id=WP_002228662.1;transl_table=11 NC_008149.1 RefSeq gene 3595267 3596217 . + . ID=gene3358;Name=YPN_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16815;old_locus_tag=YPN_3189 NC_008149.1 Protein Homology CDS 3595267 3596217 . + 0 ID=cds3271;Parent=gene3358;Dbxref=Genbank:WP_002211649.1;Name=WP_002211649.1;gbkey=CDS;product=N(6)-hydroxylysine O-acetyltransferase;protein_id=WP_002211649.1;transl_table=11 NC_008149.1 RefSeq gene 3596214 3597962 . + . ID=gene3359;Name=YPN_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16820;old_locus_tag=YPN_3190 NC_008149.1 Protein Homology CDS 3596214 3597962 . + 0 ID=cds3272;Parent=gene3359;Dbxref=Genbank:WP_002211648.1;Name=WP_002211648.1;gbkey=CDS;product=aerobactin synthase IucC;protein_id=WP_002211648.1;transl_table=11 NC_008149.1 RefSeq gene 3597959 3599287 . + . ID=gene3360;Name=YPN_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16825;old_locus_tag=YPN_3191 NC_008149.1 Protein Homology CDS 3597959 3599287 . + 0 ID=cds3273;Parent=gene3360;Dbxref=Genbank:WP_002211647.1;Name=WP_002211647.1;gbkey=CDS;product=lysine 6-monooxygenase;protein_id=WP_002211647.1;transl_table=11 NC_008149.1 RefSeq gene 3599359 3601539 . + . ID=gene3361;Name=YPN_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16830;old_locus_tag=YPN_3192 NC_008149.1 Protein Homology CDS 3599359 3601539 . + 0 ID=cds3274;Parent=gene3361;Dbxref=Genbank:WP_002211646.1;Name=WP_002211646.1;gbkey=CDS;product=ligand-gated channel protein;protein_id=WP_002211646.1;transl_table=11 NC_008149.1 RefSeq gene 3601798 3603222 . - . ID=gene3362;Name=YPN_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16835;old_locus_tag=YPN_3193 NC_008149.1 Protein Homology CDS 3601798 3603222 . - 0 ID=cds3275;Parent=gene3362;Dbxref=Genbank:WP_002211645.1;Name=WP_002211645.1;gbkey=CDS;product=sodium:galactoside symporter;protein_id=WP_002211645.1;transl_table=11 NC_008149.1 RefSeq gene 3603386 3604009 . + . ID=gene3363;Name=YPN_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16840;old_locus_tag=YPN_3194 NC_008149.1 Protein Homology CDS 3603386 3604009 . + 0 ID=cds3276;Parent=gene3363;Dbxref=Genbank:WP_042468771.1;Name=WP_042468771.1;gbkey=CDS;product=transposase;protein_id=WP_042468771.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3603439 3604885 . + . ID=id288;gbkey=repeat_region NC_008149.1 RefSeq gene 3604063 3604661 . + . ID=gene3364;Name=YPN_RS16845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS16845;old_locus_tag=YPN_3195;pseudo=true NC_008149.1 Protein Homology CDS 3604063 3604661 . + 0 ID=cds3277;Parent=gene3364;exception=annotated by transcript or proteomic data;gbkey=CDS;product=transposase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 3604738 3605901 . - . ID=gene3365;Name=YPN_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16850;old_locus_tag=YPN_3196 NC_008149.1 Protein Homology CDS 3604738 3605901 . - 0 ID=cds3278;Parent=gene3365;Dbxref=Genbank:WP_002211407.1;Name=WP_002211407.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211407.1;transl_table=11 NC_008149.1 RefSeq gene 3606195 3607214 . + . ID=gene3366;Name=YPN_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16855;old_locus_tag=YPN_3197 NC_008149.1 Protein Homology CDS 3606195 3607214 . + 0 ID=cds3279;Parent=gene3366;Dbxref=Genbank:WP_002211406.1;Name=WP_002211406.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002211406.1;transl_table=11 NC_008149.1 RefSeq gene 3607496 3608875 . + . ID=gene3367;Name=YPN_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16860;old_locus_tag=YPN_3198 NC_008149.1 Protein Homology CDS 3607496 3608875 . + 0 ID=cds3280;Parent=gene3367;Dbxref=Genbank:WP_002223680.1;Name=WP_002223680.1;gbkey=CDS;product=transporter divalent anion:Na+ symporter (DASS) family;protein_id=WP_002223680.1;transl_table=11 NC_008149.1 RefSeq gene 3609055 3609468 . - . ID=gene3368;Name=YPN_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16865;old_locus_tag=YPN_3199 NC_008149.1 Protein Homology CDS 3609055 3609468 . - 0 ID=cds3281;Parent=gene3368;Dbxref=Genbank:WP_002211404.1;Name=WP_002211404.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211404.1;transl_table=11 NC_008149.1 RefSeq gene 3610012 3610254 . - . ID=gene3369;Name=YPN_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16870;old_locus_tag=YPN_3200 NC_008149.1 Protein Homology CDS 3610012 3610254 . - 0 ID=cds3282;Parent=gene3369;Dbxref=Genbank:WP_002211403.1;Name=WP_002211403.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211403.1;transl_table=11 NC_008149.1 RefSeq gene 3610545 3614597 . - . ID=gene3370;Name=YPN_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16875;old_locus_tag=YPN_3201 NC_008149.1 Protein Homology CDS 3610545 3614597 . - 0 ID=cds3283;Parent=gene3370;Dbxref=Genbank:WP_002223678.1;Name=WP_002223678.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002223678.1;transl_table=11 NC_008149.1 RefSeq gene 3614611 3615930 . - . ID=gene3371;Name=YPN_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16880;old_locus_tag=YPN_3202 NC_008149.1 Protein Homology CDS 3614611 3615930 . - 0 ID=cds3284;Parent=gene3371;Dbxref=Genbank:WP_002211401.1;Name=WP_002211401.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211401.1;transl_table=11 NC_008149.1 RefSeq gene 3615956 3618181 . - . ID=gene3372;Name=YPN_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16885;old_locus_tag=YPN_3203 NC_008149.1 Protein Homology CDS 3615956 3618181 . - 0 ID=cds3285;Parent=gene3372;Dbxref=Genbank:WP_002211400.1;Name=WP_002211400.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002211400.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3618717 3620878 . + . ID=id289;gbkey=repeat_region NC_008149.1 RefSeq gene 3618767 3622537 . - . ID=gene3373;Name=YPN_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16890;old_locus_tag=YPN_3204 NC_008149.1 Protein Homology CDS 3618767 3622537 . - 0 ID=cds3286;Parent=gene3373;Dbxref=Genbank:WP_002211399.1;Name=WP_002211399.1;gbkey=CDS;product=autotransporter;protein_id=WP_002211399.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3623143 3625304 . + . ID=id290;gbkey=repeat_region NC_008149.1 RefSeq gene 3623193 3625193 . - . ID=gene3374;Name=YPN_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16895;old_locus_tag=YPN_3205 NC_008149.1 Protein Homology CDS 3623193 3625193 . - 0 ID=cds3287;Parent=gene3374;Dbxref=Genbank:WP_002228666.1;Name=WP_002228666.1;gbkey=CDS;product=adhesin;protein_id=WP_002228666.1;transl_table=11 NC_008149.1 RefSeq gene 3625298 3626956 . - . ID=gene3375;Name=YPN_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16900;old_locus_tag=YPN_3206 NC_008149.1 Protein Homology CDS 3625298 3626956 . - 0 ID=cds3288;Parent=gene3375;Dbxref=Genbank:WP_002213742.1;Name=WP_002213742.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213742.1;transl_table=11 NC_008149.1 RefSeq gene 3627957 3629300 . - . ID=gene3376;Name=YPN_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16905;old_locus_tag=YPN_3207 NC_008149.1 Protein Homology CDS 3627957 3629300 . - 0 ID=cds3289;Parent=gene3376;Dbxref=Genbank:WP_002223676.1;Name=WP_002223676.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002223676.1;transl_table=11 NC_008149.1 RefSeq gene 3630840 3631238 . + . ID=gene3377;Name=YPN_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16910;old_locus_tag=YPN_3208 NC_008149.1 Protein Homology CDS 3630840 3631238 . + 0 ID=cds3290;Parent=gene3377;Dbxref=Genbank:WP_002228079.1;Name=WP_002228079.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228079.1;transl_table=11 NC_008149.1 RefSeq gene 3631674 3632549 . + . ID=gene3378;Name=YPN_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16915;old_locus_tag=YPN_3209 NC_008149.1 Protein Homology CDS 3631674 3632549 . + 0 ID=cds3291;Parent=gene3378;Dbxref=Genbank:WP_002211395.1;Name=WP_002211395.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211395.1;transl_table=11 NC_008149.1 RefSeq gene 3632872 3634629 . - . ID=gene3379;Name=YPN_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16920;old_locus_tag=YPN_3210 NC_008149.1 Protein Homology CDS 3632872 3634629 . - 0 ID=cds3292;Parent=gene3379;Dbxref=Genbank:WP_002211394.1;Name=WP_002211394.1;gbkey=CDS;product=sulfate ABC transporter permease;protein_id=WP_002211394.1;transl_table=11 NC_008149.1 RefSeq gene 3634622 3636394 . - . ID=gene3380;Name=YPN_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16925;old_locus_tag=YPN_3211 NC_008149.1 Protein Homology CDS 3634622 3636394 . - 0 ID=cds3293;Parent=gene3380;Dbxref=Genbank:WP_002214927.1;Name=WP_002214927.1;gbkey=CDS;product=multidrug ABC transporter permease;protein_id=WP_002214927.1;transl_table=11 NC_008149.1 RefSeq gene 3636394 3637698 . - . ID=gene3381;Name=YPN_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16930;old_locus_tag=YPN_3212 NC_008149.1 Protein Homology CDS 3636394 3637698 . - 0 ID=cds3294;Parent=gene3381;Dbxref=Genbank:WP_002211392.1;Name=WP_002211392.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002211392.1;transl_table=11 NC_008149.1 RefSeq gene 3637688 3638452 . - . ID=gene3382;Name=YPN_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16935;old_locus_tag=YPN_3213 NC_008149.1 Protein Homology CDS 3637688 3638452 . - 0 ID=cds3295;Parent=gene3382;Dbxref=Genbank:WP_002214925.1;Name=WP_002214925.1;gbkey=CDS;product=thioesterase;protein_id=WP_002214925.1;transl_table=11 NC_008149.1 RefSeq gene 3638445 3639572 . - . ID=gene3383;Name=YPN_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16940;old_locus_tag=YPN_3214 NC_008149.1 Protein Homology CDS 3638445 3639572 . - 0 ID=cds3296;Parent=gene3383;Dbxref=Genbank:WP_002211390.1;Name=WP_002211390.1;gbkey=CDS;product=thiazolinyl imide reductase;protein_id=WP_002211390.1;transl_table=11 NC_008149.1 RefSeq gene 3639569 3639838 . - . ID=gene3384;Name=YPN_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16945 NC_008149.1 Protein Homology CDS 3639569 3639838 . - 0 ID=cds3297;Parent=gene3384;Dbxref=Genbank:WP_002231392.1;Name=WP_002231392.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002231392.1;transl_table=11 NC_008149.1 RefSeq gene 3640629 3646430 . - . ID=gene3385;Name=YPN_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16950;old_locus_tag=YPN_3216 NC_008149.1 Protein Homology CDS 3640629 3646430 . - 0 ID=cds3298;Parent=gene3385;Dbxref=Genbank:WP_011566218.1;Name=WP_011566218.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_011566218.1;transl_table=11 NC_008149.1 RefSeq gene 3646443 3648131 . - . ID=gene3386;Name=YPN_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16955;old_locus_tag=YPN_3217 NC_008149.1 Protein Homology CDS 3646443 3648131 . - 0 ID=cds3299;Parent=gene3386;Dbxref=Genbank:WP_002214915.1;Name=WP_002214915.1;gbkey=CDS;product=high molecular weight siderophore biosynthesis protein;protein_id=WP_002214915.1;transl_table=11 NC_008149.1 RefSeq gene 3648139 3654597 . - . ID=gene3387;Name=YPN_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16960;old_locus_tag=YPN_3218 NC_008149.1 Protein Homology CDS 3648139 3654597 . - 0 ID=cds3300;Parent=gene3387;Dbxref=Genbank:WP_002211387.1;Name=WP_002211387.1;gbkey=CDS;product=non-ribosomal peptide synthetase;protein_id=WP_002211387.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3654735 3656694 . + . ID=id291;gbkey=repeat_region NC_008149.1 RefSeq gene 3654805 3655584 . - . ID=gene3388;Name=YPN_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16965;old_locus_tag=YPN_3219 NC_008149.1 Protein Homology CDS 3654805 3655584 . - 0 ID=cds3301;Parent=gene3388;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 3655584 3656606 . - . ID=gene3389;Name=YPN_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16970;old_locus_tag=YPN_3220 NC_008149.1 Protein Homology CDS 3655584 3656606 . - 0 ID=cds3302;Parent=gene3389;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 3656620 3660033 . - . ID=gene3390;Name=YPN_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16975;old_locus_tag=YPN_3221 NC_008149.1 Protein Homology CDS 3656620 3660033 . - 0 ID=cds3303;Parent=gene3390;Dbxref=Genbank:WP_002211631.1;Name=WP_002211631.1;gbkey=CDS;product=peptide synthetase;protein_id=WP_002211631.1;transl_table=11 NC_008149.1 RefSeq gene 3660184 3662256 . - . ID=gene3391;Name=YPN_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16980;old_locus_tag=YPN_3222 NC_008149.1 Protein Homology CDS 3660184 3662256 . - 0 ID=cds3304;Parent=gene3391;Dbxref=Genbank:WP_002211632.1;Name=WP_002211632.1;gbkey=CDS;product=ligand-gated channel;protein_id=WP_002211632.1;transl_table=11 NC_008149.1 RefSeq gene 3662644 3663876 . - . ID=gene3392;Name=YPN_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16985;old_locus_tag=YPN_3223 NC_008149.1 Protein Homology CDS 3662644 3663876 . - 0 ID=cds3305;Parent=gene3392;Dbxref=Genbank:WP_002211633.1;Name=WP_002211633.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;product=peptidase T;protein_id=WP_002211633.1;transl_table=11 NC_008149.1 RefSeq gene 3663954 3665510 . - . ID=gene3393;Name=YPN_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16990;old_locus_tag=YPN_3224 NC_008149.1 Protein Homology CDS 3663954 3665510 . - 0 ID=cds3306;Parent=gene3393;Dbxref=Genbank:WP_002211634.1;Name=WP_002211634.1;gbkey=CDS;product=aminobenzoyl-glutamate transporter;protein_id=WP_002211634.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3666137 3666361 . + . ID=id292;gbkey=repeat_region NC_008149.1 RefSeq gene 3666229 3668055 . + . ID=gene3394;Name=YPN_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS16995;old_locus_tag=YPN_3225 NC_008149.1 Protein Homology CDS 3666229 3668055 . + 0 ID=cds3307;Parent=gene3394;Dbxref=Genbank:WP_002228670.1;Name=WP_002228670.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228670.1;transl_table=11 NC_008149.1 RefSeq gene 3668264 3669139 . + . ID=gene3395;Name=YPN_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17000;old_locus_tag=YPN_3226 NC_008149.1 Protein Homology CDS 3668264 3669139 . + 0 ID=cds3308;Parent=gene3395;Dbxref=Genbank:WP_002214025.1;Name=WP_002214025.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214025.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3669610 3669834 . + . ID=id293;gbkey=repeat_region NC_008149.1 RefSeq gene 3669702 3671582 . + . ID=gene3396;Name=YPN_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17005;old_locus_tag=YPN_3227 NC_008149.1 Protein Homology CDS 3669702 3671582 . + 0 ID=cds3309;Parent=gene3396;Dbxref=Genbank:WP_002211637.1;Name=WP_002211637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211637.1;transl_table=11 NC_008149.1 RefSeq gene 3671685 3682802 . - . ID=gene3397;Name=YPN_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17010;old_locus_tag=YPN_3228 NC_008149.1 Protein Homology CDS 3671685 3682802 . - 0 ID=cds3310;Parent=gene3397;Dbxref=Genbank:WP_002211638.1;Name=WP_002211638.1;gbkey=CDS;product=autotransporter;protein_id=WP_002211638.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3674637 3675265 . + . ID=id294;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 3675570 3675955 . + . ID=id295;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 3676599 3677054 . + . ID=id296;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 3677379 3677764 . + . ID=id297;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 3678285 3678913 . + . ID=id298;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 3679243 3679571 . + . ID=id299;gbkey=repeat_region NC_008149.1 RefSeq gene 3683656 3684243 . - . ID=gene3398;Name=YPN_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17015;old_locus_tag=YPN_3229 NC_008149.1 Protein Homology CDS 3683656 3684243 . - 0 ID=cds3311;Parent=gene3398;Dbxref=Genbank:WP_002211640.1;Name=WP_002211640.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211640.1;transl_table=11 NC_008149.1 RefSeq gene 3684521 3686011 . + . ID=gene3399;Name=YPN_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17020;old_locus_tag=YPN_3230 NC_008149.1 Protein Homology CDS 3684521 3686011 . + 0 ID=cds3312;Parent=gene3399;Dbxref=Genbank:WP_002211641.1;Name=WP_002211641.1;gbkey=CDS;product=enterotoxin;protein_id=WP_002211641.1;transl_table=11 NC_008149.1 RefSeq gene 3686146 3689265 . - . ID=gene3400;Name=YPN_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17025;old_locus_tag=YPN_3231 NC_008149.1 Protein Homology CDS 3686146 3689265 . - 0 ID=cds3313;Parent=gene3400;Dbxref=Genbank:WP_002211642.1;Name=WP_002211642.1;gbkey=CDS;product=multidrug RND transporter;protein_id=WP_002211642.1;transl_table=11 NC_008149.1 RefSeq gene 3689278 3690555 . - . ID=gene3401;Name=YPN_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17030;old_locus_tag=YPN_3232 NC_008149.1 Protein Homology CDS 3689278 3690555 . - 0 ID=cds3314;Parent=gene3401;Dbxref=Genbank:WP_002211643.1;Name=WP_002211643.1;gbkey=CDS;product=hemolysin secretion protein D;protein_id=WP_002211643.1;transl_table=11 NC_008149.1 RefSeq gene 3690994 3691191 . + . ID=gene3402;Name=YPN_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17035 NC_008149.1 Protein Homology CDS 3690994 3691191 . + 0 ID=cds3315;Parent=gene3402;Dbxref=Genbank:WP_002214016.1;Name=WP_002214016.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214016.1;transl_table=11 NC_008149.1 RefSeq gene 3691195 3693561 . + . ID=gene3403;Name=YPN_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17040;old_locus_tag=YPN_3234 NC_008149.1 Protein Homology CDS 3691195 3693561 . + 0 ID=cds3316;Parent=gene3403;Dbxref=Genbank:WP_002214014.1;Name=WP_002214014.1;gbkey=CDS;product=diguanylate cyclase;protein_id=WP_002214014.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3693724 3695167 . + . ID=id300;gbkey=repeat_region NC_008149.1 RefSeq gene 3693757 3694542 . - . ID=gene3404;Name=YPN_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17045;old_locus_tag=YPN_3235 NC_008149.1 Protein Homology CDS 3693757 3694542 . - 0 ID=cds3317;Parent=gene3404;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_008149.1 RefSeq gene 3694596 3695111 . - . ID=gene3405;Name=YPN_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17050;old_locus_tag=YPN_3236 NC_008149.1 Protein Homology CDS 3694596 3695111 . - 0 ID=cds3318;Parent=gene3405;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_008149.1 RefSeq gene 3695198 3695467 . - . ID=gene3406;Name=YPN_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17055;old_locus_tag=YPN_3237 NC_008149.1 Protein Homology CDS 3695198 3695467 . - 0 ID=cds3319;Parent=gene3406;Dbxref=Genbank:WP_002209257.1;Name=WP_002209257.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11 NC_008149.1 RefSeq gene 3695589 3696563 . - . ID=gene3407;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=YPN_RS17060;old_locus_tag=YPN_3238 NC_008149.1 Protein Homology CDS 3695589 3696563 . - 0 ID=cds3320;Parent=gene3407;Dbxref=Genbank:WP_002209256.1;Name=WP_002209256.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_002209256.1;transl_table=11 NC_008149.1 RefSeq gene 3696563 3696973 . - . ID=gene3408;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=YPN_RS17065;old_locus_tag=YPN_3239 NC_008149.1 Protein Homology CDS 3696563 3696973 . - 0 ID=cds3321;Parent=gene3408;Dbxref=Genbank:WP_002209255.1;Name=WP_002209255.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_002209255.1;transl_table=11 NC_008149.1 RefSeq gene 3697039 3699717 . - . ID=gene3409;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=YPN_RS17070;old_locus_tag=YPN_3240 NC_008149.1 Protein Homology CDS 3697039 3699717 . - 0 ID=cds3322;Parent=gene3409;Dbxref=Genbank:WP_002223151.1;Name=WP_002223151.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_002223151.1;transl_table=11 NC_008149.1 RefSeq gene 3699742 3701229 . - . ID=gene3410;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=YPN_RS17075;old_locus_tag=YPN_3241 NC_008149.1 Protein Homology CDS 3699742 3701229 . - 0 ID=cds3323;Parent=gene3410;Dbxref=Genbank:WP_002209253.1;Name=WP_002209253.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11 NC_008149.1 RefSeq gene 3701251 3701703 . - . ID=gene3411;Name=YPN_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17080;old_locus_tag=YPN_3242 NC_008149.1 Protein Homology CDS 3701251 3701703 . - 0 ID=cds3324;Parent=gene3411;Dbxref=Genbank:WP_002222054.1;Name=WP_002222054.1;Note=required for the maturation of the 30S ribosomal subunits;gbkey=CDS;product=ribosome maturation factor RimP;protein_id=WP_002222054.1;transl_table=11 NC_008149.1 RefSeq gene 3701919 3701995 . - . ID=gene3412;Name=YPN_RS17085;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS17085;old_locus_tag=YPN_r097 NC_008149.1 tRNAscan-SE tRNA 3701919 3701995 . - . ID=rna82;Parent=gene3412;anticodon=(pos:complement(3701959..3701961));gbkey=tRNA;product=tRNA-Met NC_008149.1 tRNAscan-SE exon 3701919 3701995 . - . ID=id301;Parent=rna82;anticodon=(pos:complement(3701959..3701961));gbkey=tRNA;product=tRNA-Met NC_008149.1 RefSeq gene 3702056 3702142 . - . ID=gene3413;Name=YPN_RS17090;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS17090;old_locus_tag=YPN_r098 NC_008149.1 tRNAscan-SE tRNA 3702056 3702142 . - . ID=rna83;Parent=gene3413;anticodon=(pos:complement(3702106..3702108));gbkey=tRNA;product=tRNA-Leu NC_008149.1 tRNAscan-SE exon 3702056 3702142 . - . ID=id302;Parent=rna83;anticodon=(pos:complement(3702106..3702108));gbkey=tRNA;product=tRNA-Leu NC_008149.1 RefSeq gene 3702235 3702570 . - . ID=gene3414;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=YPN_RS17095;old_locus_tag=YPN_3243 NC_008149.1 Protein Homology CDS 3702235 3702570 . - 0 ID=cds3325;Parent=gene3414;Dbxref=Genbank:WP_002210190.1;Name=WP_002210190.1;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11 NC_008149.1 RefSeq gene 3702793 3704133 . - . ID=gene3415;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=YPN_RS17100;old_locus_tag=YPN_3244 NC_008149.1 Protein Homology CDS 3702793 3704133 . - 0 ID=cds3326;Parent=gene3415;Dbxref=Genbank:WP_002210189.1;Name=WP_002210189.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11 NC_008149.1 RefSeq gene 3704143 3704976 . - . ID=gene3416;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=YPN_RS17105;old_locus_tag=YPN_3245 NC_008149.1 Protein Homology CDS 3704143 3704976 . - 0 ID=cds3327;Parent=gene3416;Dbxref=Genbank:WP_002210188.1;Name=WP_002210188.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_002210188.1;transl_table=11 NC_008149.1 RefSeq gene 3705096 3707030 . - . ID=gene3417;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=YPN_RS17110;old_locus_tag=YPN_3246 NC_008149.1 Protein Homology CDS 3705096 3707030 . - 0 ID=cds3328;Parent=gene3417;Dbxref=Genbank:WP_002228195.1;Name=WP_002228195.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=WP_002228195.1;transl_table=11 NC_008149.1 RefSeq gene 3707087 3707716 . - . ID=gene3418;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=YPN_RS17115;old_locus_tag=YPN_3247 NC_008149.1 Protein Homology CDS 3707087 3707716 . - 0 ID=cds3329;Parent=gene3418;Dbxref=Genbank:WP_002228196.1;Name=WP_002228196.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase E;protein_id=WP_002228196.1;transl_table=11 NC_008149.1 RefSeq gene 3707863 3708156 . + . ID=gene3419;Name=YPN_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17120;old_locus_tag=YPN_3248 NC_008149.1 Protein Homology CDS 3707863 3708156 . + 0 ID=cds3330;Parent=gene3419;Dbxref=Genbank:WP_002210185.1;Name=WP_002210185.1;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability;gbkey=CDS;product=RNA-binding protein;protein_id=WP_002210185.1;transl_table=11 NC_008149.1 RefSeq gene 3708284 3708760 . - . ID=gene3420;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=YPN_RS17125;old_locus_tag=YPN_3249 NC_008149.1 Protein Homology CDS 3708284 3708760 . - 0 ID=cds3331;Parent=gene3420;Dbxref=Genbank:WP_002210184.1;Name=WP_002210184.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_002210184.1;transl_table=11 NC_008149.1 RefSeq gene 3709018 3710466 . + . ID=gene3421;Name=YPN_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17130;old_locus_tag=YPN_3250 NC_008149.1 Protein Homology CDS 3709018 3710466 . + 0 ID=cds3332;Parent=gene3421;Dbxref=Genbank:WP_002217314.1;Name=WP_002217314.1;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_002217314.1;transl_table=11 NC_008149.1 RefSeq gene 3710472 3711134 . + . ID=gene3422;Name=YPN_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17135;old_locus_tag=YPN_3251 NC_008149.1 Protein Homology CDS 3710472 3711134 . + 0 ID=cds3333;Parent=gene3422;Dbxref=Genbank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002210183.1;transl_table=11 NC_008149.1 RefSeq gene 3711131 3712198 . + . ID=gene3423;Name=YPN_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17140;old_locus_tag=YPN_3252 NC_008149.1 Protein Homology CDS 3711131 3712198 . + 0 ID=cds3334;Parent=gene3423;Dbxref=Genbank:WP_002210182.1;Name=WP_002210182.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002210182.1;transl_table=11 NC_008149.1 RefSeq gene 3712293 3713465 . - . ID=gene3424;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=YPN_RS17145;old_locus_tag=YPN_3253 NC_008149.1 Protein Homology CDS 3712293 3713465 . - 0 ID=cds3335;Parent=gene3424;Dbxref=Genbank:WP_002210181.1;Name=WP_002210181.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase Obg;protein_id=WP_002210181.1;transl_table=11 NC_008149.1 RefSeq gene 3713466 3714452 . - . ID=gene3425;Name=YPN_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17150;old_locus_tag=YPN_3254 NC_008149.1 Protein Homology CDS 3713466 3714452 . - 0 ID=cds3336;Parent=gene3425;Dbxref=Genbank:WP_002210180.1;Name=WP_002210180.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210180.1;transl_table=11 NC_008149.1 RefSeq gene 3714540 3714797 . - . ID=gene3426;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=YPN_RS17155;old_locus_tag=YPN_3255 NC_008149.1 Protein Homology CDS 3714540 3714797 . - 0 ID=cds3337;Parent=gene3426;Dbxref=Genbank:WP_002210179.1;Name=WP_002210179.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11 NC_008149.1 RefSeq gene 3714817 3715128 . - . ID=gene3427;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=YPN_RS17160;old_locus_tag=YPN_3256 NC_008149.1 Protein Homology CDS 3714817 3715128 . - 0 ID=cds3338;Parent=gene3427;Dbxref=Genbank:WP_002210178.1;Name=WP_002210178.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11 NC_008149.1 RefSeq gene 3715388 3716359 . + . ID=gene3428;Name=YPN_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17165;old_locus_tag=YPN_3257 NC_008149.1 Protein Homology CDS 3715388 3716359 . + 0 ID=cds3339;Parent=gene3428;Dbxref=Genbank:WP_002210177.1;Name=WP_002210177.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_002210177.1;transl_table=11 NC_008149.1 RefSeq gene 3716456 3716803 . - . ID=gene3429;Name=YPN_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17170;old_locus_tag=YPN_3258 NC_008149.1 Protein Homology CDS 3716456 3716803 . - 0 ID=cds3340;Parent=gene3429;Dbxref=Genbank:WP_002210176.1;Name=WP_002210176.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11 NC_008149.1 RefSeq gene 3716987 3717262 . + . ID=gene3430;Name=YPN_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17175;old_locus_tag=YPN_3259 NC_008149.1 Protein Homology CDS 3716987 3717262 . + 0 ID=cds3341;Parent=gene3430;Dbxref=Genbank:WP_002210175.1;Name=WP_002210175.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002210175.1;transl_table=11 NC_008149.1 RefSeq gene 3717696 3718634 . - . ID=gene3431;Name=YPN_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17180;old_locus_tag=YPN_3260 NC_008149.1 Protein Homology CDS 3717696 3718634 . - 0 ID=cds3342;Parent=gene3431;Dbxref=Genbank:WP_002210174.1;Name=WP_002210174.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;product=malate dehydrogenase;protein_id=WP_002210174.1;transl_table=11 NC_008149.1 RefSeq gene 3719098 3719568 . + . ID=gene3432;Name=YPN_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17185;old_locus_tag=YPN_3261 NC_008149.1 Protein Homology CDS 3719098 3719568 . + 0 ID=cds3343;Parent=gene3432;Dbxref=Genbank:WP_002210173.1;Name=WP_002210173.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;product=arginine repressor;protein_id=WP_002210173.1;transl_table=11 NC_008149.1 RefSeq gene 3719957 3720220 . + . ID=gene3433;Name=YPN_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17190;old_locus_tag=YPN_3262 NC_008149.1 Protein Homology CDS 3719957 3720220 . + 0 ID=cds3344;Parent=gene3433;Dbxref=Genbank:WP_002210172.1;Name=WP_002210172.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210172.1;transl_table=11 NC_008149.1 RefSeq gene 3720223 3720429 . - . ID=gene3434;Name=YPN_RS17195;gbkey=Gene;gene_biotype=other;locus_tag=YPN_RS17195 NC_008149.1 RefSeq repeat_region 3720245 3720413 . + . ID=id303;gbkey=repeat_region NC_008149.1 RefSeq gene 3720516 3721898 . - . ID=gene3435;Name=YPN_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17200;old_locus_tag=YPN_3263 NC_008149.1 Protein Homology CDS 3720516 3721898 . - 0 ID=cds3345;Parent=gene3435;Dbxref=Genbank:WP_002210171.1;Name=WP_002210171.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_002210171.1;transl_table=11 NC_008149.1 RefSeq gene 3722069 3723082 . + . ID=gene3436;Name=YPN_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17205;old_locus_tag=YPN_3264 NC_008149.1 Protein Homology CDS 3722069 3723082 . + 0 ID=cds3346;Parent=gene3436;Dbxref=Genbank:WP_002216946.1;Name=WP_002216946.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002216946.1;transl_table=11 NC_008149.1 RefSeq gene 3723282 3723809 . + . ID=gene3437;Name=YPN_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17210;old_locus_tag=YPN_3265 NC_008149.1 Protein Homology CDS 3723282 3723809 . + 0 ID=cds3347;Parent=gene3437;Dbxref=Genbank:WP_002210169.1;Name=WP_002210169.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_002210169.1;transl_table=11 NC_008149.1 RefSeq gene 3723927 3724283 . - . ID=gene3438;Name=YPN_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17215;old_locus_tag=YPN_3266 NC_008149.1 Protein Homology CDS 3723927 3724283 . - 0 ID=cds3348;Parent=gene3438;Dbxref=Genbank:WP_002210168.1;Name=WP_002210168.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210168.1;transl_table=11 NC_008149.1 RefSeq gene 3724286 3728203 . - . ID=gene3439;Name=YPN_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17220;old_locus_tag=YPN_3267 NC_008149.1 Protein Homology CDS 3724286 3728203 . - 0 ID=cds3349;Parent=gene3439;Dbxref=Genbank:WP_002210167.1;Name=WP_002210167.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210167.1;transl_table=11 NC_008149.1 RefSeq gene 3728200 3729936 . - . ID=gene3440;Name=YPN_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17225;old_locus_tag=YPN_3268 NC_008149.1 Protein Homology CDS 3728200 3729936 . - 0 ID=cds3350;Parent=gene3440;Dbxref=Genbank:WP_002210166.1;Name=WP_002210166.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210166.1;transl_table=11 NC_008149.1 RefSeq gene 3730211 3730849 . + . ID=gene3441;Name=YPN_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17230;old_locus_tag=YPN_3269 NC_008149.1 Protein Homology CDS 3730211 3730849 . + 0 ID=cds3351;Parent=gene3441;Dbxref=Genbank:WP_002210165.1;Name=WP_002210165.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;product=peptide methionine sulfoxide reductase MsrA;protein_id=WP_002210165.1;transl_table=11 NC_008149.1 RefSeq gene 3731127 3732458 . + . ID=gene3442;Name=YPN_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17235;old_locus_tag=YPN_3270 NC_008149.1 Protein Homology CDS 3731127 3732458 . + 0 ID=cds3352;Parent=gene3442;Dbxref=Genbank:WP_002210164.1;Name=WP_002210164.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210164.1;transl_table=11 NC_008149.1 RefSeq gene 3732566 3732778 . - . ID=gene3443;Name=YPN_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17240;old_locus_tag=YPN_3271 NC_008149.1 Protein Homology CDS 3732566 3732778 . - 0 ID=cds3353;Parent=gene3443;Dbxref=Genbank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210163.1;transl_table=11 NC_008149.1 RefSeq gene 3733114 3733677 . + . ID=gene3444;Name=YPN_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17245;old_locus_tag=YPN_3272 NC_008149.1 Protein Homology CDS 3733114 3733677 . + 0 ID=cds3354;Parent=gene3444;Dbxref=Genbank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210162.1;transl_table=11 NC_008149.1 RefSeq gene 3733680 3734420 . - . ID=gene3445;Name=YPN_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17250;old_locus_tag=YPN_3273 NC_008149.1 Protein Homology CDS 3733680 3734420 . - 0 ID=cds3355;Parent=gene3445;Dbxref=Genbank:WP_002220539.1;Name=WP_002220539.1;Note=catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate;gbkey=CDS;product=3'-5'-bisphosphate nucleotidase;protein_id=WP_002220539.1;transl_table=11 NC_008149.1 RefSeq gene 3734855 3736825 . + . ID=gene3446;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=YPN_RS17255;old_locus_tag=YPN_3274 NC_008149.1 Protein Homology CDS 3734855 3736825 . + 0 ID=cds3356;Parent=gene3446;Dbxref=Genbank:WP_002210160.1;Name=WP_002210160.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;product=3'-nucleotidase;protein_id=WP_002210160.1;transl_table=11 NC_008149.1 RefSeq gene 3736980 3737645 . + . ID=gene3447;Name=YPN_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17260;old_locus_tag=YPN_3275 NC_008149.1 Protein Homology CDS 3736980 3737645 . + 0 ID=cds3357;Parent=gene3447;Dbxref=Genbank:WP_002210159.1;Name=WP_002210159.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_002210159.1;transl_table=11 NC_008149.1 RefSeq gene 3737743 3738363 . - . ID=gene3448;Name=YPN_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17265;old_locus_tag=YPN_3276 NC_008149.1 Protein Homology CDS 3737743 3738363 . - 0 ID=cds3358;Parent=gene3448;Dbxref=Genbank:WP_002228198.1;Name=WP_002228198.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228198.1;transl_table=11 NC_008149.1 RefSeq gene 3738706 3739446 . + . ID=gene3449;Name=YPN_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17270;old_locus_tag=YPN_3277 NC_008149.1 Protein Homology CDS 3738706 3739446 . + 0 ID=cds3359;Parent=gene3449;Dbxref=Genbank:WP_002210158.1;Name=WP_002210158.1;gbkey=CDS;product=peptidoglycan-binding protein LysM;protein_id=WP_002210158.1;transl_table=11 NC_008149.1 RefSeq gene 3739586 3740041 . + . ID=gene3450;Name=YPN_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17275;old_locus_tag=YPN_3278 NC_008149.1 Protein Homology CDS 3739586 3740041 . + 0 ID=cds3360;Parent=gene3450;Dbxref=Genbank:WP_002210157.1;Name=WP_002210157.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210157.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3740050 3740767 . + . ID=id304;gbkey=repeat_region NC_008149.1 RefSeq gene 3740163 3740621 . - . ID=gene3451;Name=YPN_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17280;old_locus_tag=YPN_3279 NC_008149.1 Protein Homology CDS 3740163 3740621 . - 0 ID=cds3361;Parent=gene3451;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 3740611 3740781 . - . ID=gene3452;Name=YPN_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17285 NC_008149.1 Protein Homology CDS 3740611 3740781 . - 0 ID=cds3362;Parent=gene3452;Dbxref=Genbank:WP_025470773.1;Name=WP_025470773.1;gbkey=CDS;product=transposase;protein_id=WP_025470773.1;transl_table=11 NC_008149.1 RefSeq gene 3740817 3741269 . - . ID=gene3453;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=YPN_RS17290;old_locus_tag=YPN_3280 NC_008149.1 Protein Homology CDS 3740817 3741269 . - 0 ID=cds3363;Parent=gene3453;Dbxref=Genbank:WP_002210156.1;Name=WP_002210156.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11 NC_008149.1 RefSeq gene 3741309 3741536 . - . ID=gene3454;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=YPN_RS17295;old_locus_tag=YPN_3281 NC_008149.1 Protein Homology CDS 3741309 3741536 . - 0 ID=cds3364;Parent=gene3454;Dbxref=Genbank:WP_002210155.1;Name=WP_002210155.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11 NC_008149.1 RefSeq gene 3741541 3741858 . - . ID=gene3455;Name=YPN_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17300;old_locus_tag=YPN_3282 NC_008149.1 Protein Homology CDS 3741541 3741858 . - 0 ID=cds3365;Parent=gene3455;Dbxref=Genbank:WP_002430134.1;Name=WP_002430134.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein n;protein_id=WP_002430134.1;transl_table=11 NC_008149.1 RefSeq gene 3741867 3742259 . - . ID=gene3456;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=YPN_RS17305;old_locus_tag=YPN_3283 NC_008149.1 Protein Homology CDS 3741867 3742259 . - 0 ID=cds3366;Parent=gene3456;Dbxref=Genbank:WP_002210153.1;Name=WP_002210153.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11 NC_008149.1 RefSeq gene 3742273 3742551 . - . ID=gene3457;Name=YPN_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17310 NC_008149.1 Protein Homology CDS 3742273 3742551 . - 0 ID=cds3367;Parent=gene3457;Dbxref=Genbank:WP_002228199.1;Name=WP_002228199.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228199.1;transl_table=11 NC_008149.1 RefSeq gene 3742626 3743327 . - . ID=gene3458;Name=YPN_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17315;old_locus_tag=YPN_3284 NC_008149.1 Protein Homology CDS 3742626 3743327 . - 0 ID=cds3368;Parent=gene3458;Dbxref=Genbank:WP_002210152.1;Name=WP_002210152.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;product=esterase;protein_id=WP_002210152.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3743296 3745252 . + . ID=id305;gbkey=repeat_region NC_008149.1 RefSeq gene 3743384 3744406 . + . ID=gene3459;Name=YPN_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17320;old_locus_tag=YPN_3285 NC_008149.1 Protein Homology CDS 3743384 3744406 . + 0 ID=cds3369;Parent=gene3459;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 3744406 3745185 . + . ID=gene3460;Name=YPN_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17325;old_locus_tag=YPN_3286 NC_008149.1 Protein Homology CDS 3744406 3745185 . + 0 ID=cds3370;Parent=gene3460;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 3745236 3745334 . - . ID=gene3461;Name=YPN_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17330;old_locus_tag=YPN_3287 NC_008149.1 Protein Homology CDS 3745236 3745334 . - 0 ID=cds3371;Parent=gene3461;Dbxref=Genbank:WP_002215296.1;Name=WP_002215296.1;gbkey=CDS;product=phospholipase;protein_id=WP_002215296.1;transl_table=11 NC_008149.1 RefSeq gene 3745525 3745836 . + . ID=gene3462;Name=YPN_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17335;old_locus_tag=YPN_3288 NC_008149.1 Protein Homology CDS 3745525 3745836 . + 0 ID=cds3372;Parent=gene3462;Dbxref=Genbank:WP_002215294.1;Name=WP_002215294.1;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;gbkey=CDS;product=transporter;protein_id=WP_002215294.1;transl_table=11 NC_008149.1 RefSeq gene 3745908 3747539 . - . ID=gene3463;Name=YPN_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17340;old_locus_tag=YPN_3289 NC_008149.1 Protein Homology CDS 3745908 3747539 . - 0 ID=cds3373;Parent=gene3463;Dbxref=Genbank:WP_002353634.1;Name=WP_002353634.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;product=isovaleryl CoA dehydrogenase;protein_id=WP_002353634.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3747709 3747883 . + . ID=id306;gbkey=repeat_region NC_008149.1 RefSeq gene 3747959 3748699 . - . ID=gene3464;Name=YPN_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17345;old_locus_tag=YPN_3290 NC_008149.1 Protein Homology CDS 3747959 3748699 . - 0 ID=cds3374;Parent=gene3464;Dbxref=Genbank:WP_002209161.1;Name=WP_002209161.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11 NC_008149.1 RefSeq gene 3748818 3751352 . - . ID=gene3465;Name=YPN_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17350;old_locus_tag=YPN_3291 NC_008149.1 Protein Homology CDS 3748818 3751352 . - 0 ID=cds3375;Parent=gene3465;Dbxref=Genbank:WP_002209159.1;Name=WP_002209159.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_002209159.1;transl_table=11 NC_008149.1 RefSeq gene 3751593 3752018 . - . ID=gene3466;Name=YPN_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17355;old_locus_tag=YPN_3292 NC_008149.1 Protein Homology CDS 3751593 3752018 . - 0 ID=cds3376;Parent=gene3466;Dbxref=Genbank:WP_002217229.1;Name=WP_002217229.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002217229.1;transl_table=11 NC_008149.1 RefSeq gene 3752387 3753685 . - . ID=gene3467;Name=YPN_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17360;old_locus_tag=YPN_3293 NC_008149.1 Protein Homology CDS 3752387 3753685 . - 0 ID=cds3377;Parent=gene3467;Dbxref=Genbank:WP_002209157.1;Name=WP_002209157.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_002209157.1;transl_table=11 NC_008149.1 RefSeq gene 3753785 3753985 . - . ID=gene3468;Name=YPN_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17365;old_locus_tag=YPN_3294 NC_008149.1 Protein Homology CDS 3753785 3753985 . - 0 ID=cds3378;Parent=gene3468;Dbxref=Genbank:WP_002217227.1;Name=WP_002217227.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217227.1;transl_table=11 NC_008149.1 RefSeq gene 3754157 3755161 . - . ID=gene3469;Name=YPN_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17370;old_locus_tag=YPN_3295 NC_008149.1 Protein Homology CDS 3754157 3755161 . - 0 ID=cds3379;Parent=gene3469;Dbxref=Genbank:WP_002209155.1;Name=WP_002209155.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209155.1;transl_table=11 NC_008149.1 RefSeq gene 3755165 3756424 . - . ID=gene3470;Name=YPN_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17375;old_locus_tag=YPN_3296 NC_008149.1 Protein Homology CDS 3755165 3756424 . - 0 ID=cds3380;Parent=gene3470;Dbxref=Genbank:WP_002209154.1;Name=WP_002209154.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_002209154.1;transl_table=11 NC_008149.1 RefSeq gene 3756665 3757951 . - . ID=gene3471;Name=YPN_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17380;old_locus_tag=YPN_3297 NC_008149.1 Protein Homology CDS 3756665 3757951 . - 0 ID=cds3381;Parent=gene3471;Dbxref=Genbank:WP_002209152.1;Name=WP_002209152.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_002209152.1;transl_table=11 NC_008149.1 RefSeq gene 3758050 3758355 . - . ID=gene3472;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=YPN_RS17385;old_locus_tag=YPN_3298 NC_008149.1 Protein Homology CDS 3758050 3758355 . - 0 ID=cds3382;Parent=gene3472;Dbxref=Genbank:WP_002209151.1;Name=WP_002209151.1;Note=HF-I%2C host factor for RNA phage Q beta replication;gbkey=CDS;gene=hfq;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11 NC_008149.1 RefSeq gene 3758471 3759412 . - . ID=gene3473;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=YPN_RS17390;old_locus_tag=YPN_3299 NC_008149.1 Protein Homology CDS 3758471 3759412 . - 0 ID=cds3383;Parent=gene3473;Dbxref=Genbank:WP_002209149.1;Name=WP_002209149.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA dimethylallyltransferase;protein_id=WP_002209149.1;transl_table=11 NC_008149.1 RefSeq gene 3759405 3761312 . - . ID=gene3474;Name=YPN_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17395;old_locus_tag=YPN_3300 NC_008149.1 Protein Homology CDS 3759405 3761312 . - 0 ID=cds3384;Parent=gene3474;Dbxref=Genbank:WP_002209148.1;Name=WP_002209148.1;gbkey=CDS;product=DNA mismatch repair protein MutL;protein_id=WP_002209148.1;transl_table=11 NC_008149.1 RefSeq gene 3761328 3763241 . - . ID=gene3475;Name=YPN_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17400;old_locus_tag=YPN_3301 NC_008149.1 Protein Homology CDS 3761328 3763241 . - 0 ID=cds3385;Parent=gene3475;Dbxref=Genbank:WP_011566219.1;Name=WP_011566219.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_011566219.1;transl_table=11 NC_008149.1 RefSeq gene 3763249 3763719 . - . ID=gene3476;Name=YPN_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17405;old_locus_tag=YPN_3302 NC_008149.1 Protein Homology CDS 3763249 3763719 . - 0 ID=cds3386;Parent=gene3476;Dbxref=Genbank:WP_002209146.1;Name=WP_002209146.1;Note=needed for nucleoid integrity%3B possibly involved in cell wall synthesis;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_002209146.1;transl_table=11 NC_008149.1 RefSeq gene 3763730 3765244 . - . ID=gene3477;Name=YPN_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17410;old_locus_tag=YPN_3303 NC_008149.1 Protein Homology CDS 3763730 3765244 . - 0 ID=cds3387;Parent=gene3477;Dbxref=Genbank:WP_002209145.1;Name=WP_002209145.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002209145.1;transl_table=11 NC_008149.1 RefSeq gene 3765243 3766478 . + . ID=gene3478;Name=YPN_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17415;old_locus_tag=YPN_3304 NC_008149.1 Protein Homology CDS 3765243 3766478 . + 0 ID=cds3388;Parent=gene3478;Dbxref=Genbank:WP_002209144.1;Name=WP_002209144.1;gbkey=CDS;product=epoxyqueuosine reductase;protein_id=WP_002209144.1;transl_table=11 NC_008149.1 RefSeq gene 3766790 3766865 . - . ID=gene3479;Name=YPN_RS17420;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS17420;old_locus_tag=YPN_r099 NC_008149.1 tRNAscan-SE tRNA 3766790 3766865 . - . ID=rna84;Parent=gene3479;anticodon=(pos:complement(3766830..3766832));gbkey=tRNA;product=tRNA-Gly NC_008149.1 tRNAscan-SE exon 3766790 3766865 . - . ID=id307;Parent=rna84;anticodon=(pos:complement(3766830..3766832));gbkey=tRNA;product=tRNA-Gly NC_008149.1 RefSeq gene 3766957 3767032 . - . ID=gene3480;Name=YPN_RS17425;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS17425;old_locus_tag=YPN_r100 NC_008149.1 tRNAscan-SE tRNA 3766957 3767032 . - . ID=rna85;Parent=gene3480;anticodon=(pos:complement(3766997..3766999));gbkey=tRNA;product=tRNA-Gly NC_008149.1 tRNAscan-SE exon 3766957 3767032 . - . ID=id308;Parent=rna85;anticodon=(pos:complement(3766997..3766999));gbkey=tRNA;product=tRNA-Gly NC_008149.1 RefSeq repeat_region 3767236 3767578 . + . ID=id309;gbkey=repeat_region NC_008149.1 RefSeq gene 3767590 3768135 . - . ID=gene3481;Name=YPN_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17430;old_locus_tag=YPN_3305 NC_008149.1 Protein Homology CDS 3767590 3768135 . - 0 ID=cds3389;Parent=gene3481;Dbxref=Genbank:WP_002209143.1;Name=WP_002209143.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_002209143.1;transl_table=11 NC_008149.1 RefSeq gene 3768134 3768328 . + . ID=gene3482;Name=YPN_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17435 NC_008149.1 Protein Homology CDS 3768134 3768328 . + 0 ID=cds3390;Parent=gene3482;Dbxref=Genbank:WP_015683799.1;Name=WP_015683799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_015683799.1;transl_table=11 NC_008149.1 RefSeq gene 3768335 3769387 . + . ID=gene3483;Name=YPN_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17440;old_locus_tag=YPN_3306 NC_008149.1 Protein Homology CDS 3768335 3769387 . + 0 ID=cds3391;Parent=gene3483;Dbxref=Genbank:WP_002209142.1;Name=WP_002209142.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;product=GTPase RsgA;protein_id=WP_002209142.1;transl_table=11 NC_008149.1 RefSeq gene 3769589 3770470 . + . ID=gene3484;Name=YPN_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17445;old_locus_tag=YPN_3307 NC_008149.1 Protein Homology CDS 3769589 3770470 . + 0 ID=cds3392;Parent=gene3484;Dbxref=Genbank:WP_002209141.1;Name=WP_002209141.1;gbkey=CDS;product=phosphatidylserine decarboxylase proenzyme;protein_id=WP_002209141.1;transl_table=11 NC_008149.1 RefSeq gene 3770512 3773853 . + . ID=gene3485;Name=YPN_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17450;old_locus_tag=YPN_3308 NC_008149.1 Protein Homology CDS 3770512 3773853 . + 0 ID=cds3393;Parent=gene3485;Dbxref=Genbank:WP_002209140.1;Name=WP_002209140.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_002209140.1;transl_table=11 NC_008149.1 RefSeq gene 3773974 3774951 . - . ID=gene3486;Name=YPN_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17455;old_locus_tag=YPN_3309 NC_008149.1 Protein Homology CDS 3773974 3774951 . - 0 ID=cds3394;Parent=gene3486;Dbxref=Genbank:WP_002209139.1;Name=WP_002209139.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11 NC_008149.1 RefSeq gene 3775111 3775302 . - . ID=gene3487;Name=YPN_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17460;old_locus_tag=YPN_3310 NC_008149.1 Protein Homology CDS 3775111 3775302 . - 0 ID=cds3395;Parent=gene3487;Dbxref=Genbank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209138.1;transl_table=11 NC_008149.1 RefSeq gene 3775409 3777232 . + . ID=gene3488;Name=YPN_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17465;old_locus_tag=YPN_3311 NC_008149.1 Protein Homology CDS 3775409 3777232 . + 0 ID=cds3396;Parent=gene3488;Dbxref=Genbank:WP_002209137.1;Name=WP_002209137.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase flavoprotein subunit;protein_id=WP_002209137.1;transl_table=11 NC_008149.1 RefSeq gene 3777225 3777959 . + . ID=gene3489;Name=YPN_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17470;old_locus_tag=YPN_3312 NC_008149.1 Protein Homology CDS 3777225 3777959 . + 0 ID=cds3397;Parent=gene3489;Dbxref=Genbank:WP_002209136.1;Name=WP_002209136.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11 NC_008149.1 RefSeq gene 3777976 3778368 . + . ID=gene3490;Name=YPN_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17475;old_locus_tag=YPN_3313 NC_008149.1 Protein Homology CDS 3777976 3778368 . + 0 ID=cds3398;Parent=gene3490;Dbxref=Genbank:WP_002209135.1;Name=WP_002209135.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;product=fumarate reductase subunit C;protein_id=WP_002209135.1;transl_table=11 NC_008149.1 RefSeq gene 3778385 3778741 . + . ID=gene3491;Name=YPN_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17480;old_locus_tag=YPN_3314 NC_008149.1 Protein Homology CDS 3778385 3778741 . + 0 ID=cds3399;Parent=gene3491;Dbxref=Genbank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;product=fumarate reductase subunit D;protein_id=WP_002209134.1;transl_table=11 NC_008149.1 RefSeq gene 3778906 3779220 . - . ID=gene3492;Name=YPN_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17485;old_locus_tag=YPN_3315 NC_008149.1 Protein Homology CDS 3778906 3779220 . - 0 ID=cds3400;Parent=gene3492;Dbxref=Genbank:WP_002228124.1;Name=WP_002228124.1;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=WP_002228124.1;transl_table=11 NC_008149.1 RefSeq gene 3779467 3780033 . - . ID=gene3493;Name=YPN_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17490;old_locus_tag=YPN_3316 NC_008149.1 Protein Homology CDS 3779467 3780033 . - 0 ID=cds3401;Parent=gene3493;Dbxref=Genbank:WP_002209131.1;Name=WP_002209131.1;gbkey=CDS;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11 NC_008149.1 RefSeq gene 3780069 3781097 . + . ID=gene3494;Name=YPN_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17495;old_locus_tag=YPN_3317 NC_008149.1 Protein Homology CDS 3780069 3781097 . + 0 ID=cds3402;Parent=gene3494;Dbxref=Genbank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11 NC_008149.1 RefSeq gene 3781382 3781780 . - . ID=gene3495;Name=YPN_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17500;old_locus_tag=YPN_3318 NC_008149.1 Protein Homology CDS 3781382 3781780 . - 0 ID=cds3403;Parent=gene3495;Dbxref=Genbank:WP_002209129.1;Name=WP_002209129.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209129.1;transl_table=11 NC_008149.1 RefSeq gene 3782404 3784050 . - . ID=gene3496;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=YPN_RS17505;old_locus_tag=YPN_3319 NC_008149.1 Protein Homology CDS 3782404 3784050 . - 0 ID=cds3404;Parent=gene3496;Dbxref=Genbank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_002209128.1;transl_table=11 NC_008149.1 RefSeq gene 3784097 3784390 . - . ID=gene3497;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=YPN_RS17510;old_locus_tag=YPN_3320 NC_008149.1 Protein Homology CDS 3784097 3784390 . - 0 ID=cds3405;Parent=gene3497;Dbxref=Genbank:WP_002209127.1;Name=WP_002209127.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_002209127.1;transl_table=11 NC_008149.1 RefSeq gene 3784645 3785223 . - . ID=gene3498;Name=YPN_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17515;old_locus_tag=YPN_3321 NC_008149.1 Protein Homology CDS 3784645 3785223 . - 0 ID=cds3406;Parent=gene3498;Dbxref=Genbank:WP_002209126.1;Name=WP_002209126.1;gbkey=CDS;product=exclusion suppressor FxsA;protein_id=WP_002209126.1;transl_table=11 NC_008149.1 RefSeq gene 3785671 3787107 . + . ID=gene3499;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=YPN_RS17520;old_locus_tag=YPN_3322 NC_008149.1 Protein Homology CDS 3785671 3787107 . + 0 ID=cds3407;Parent=gene3499;Dbxref=Genbank:WP_002223119.1;Name=WP_002223119.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_002223119.1;transl_table=11 NC_008149.1 RefSeq gene 3787227 3788528 . + . ID=gene3500;Name=YPN_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17525;old_locus_tag=YPN_3323 NC_008149.1 Protein Homology CDS 3787227 3788528 . + 0 ID=cds3408;Parent=gene3500;Dbxref=Genbank:WP_002209123.1;Name=WP_002209123.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;product=C4-dicarboxylate ABC transporter;protein_id=WP_002209123.1;transl_table=11 NC_008149.1 RefSeq gene 3788749 3789072 . + . ID=gene3501;Name=YPN_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17530;old_locus_tag=YPN_3324 NC_008149.1 Protein Homology CDS 3788749 3789072 . + 0 ID=cds3409;Parent=gene3501;Dbxref=Genbank:WP_002353622.1;Name=WP_002353622.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;product=divalent ion tolerance protein CutA;protein_id=WP_002353622.1;transl_table=11 NC_008149.1 RefSeq gene 3789048 3790835 . + . ID=gene3502;Name=dipZ;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=YPN_RS17535;old_locus_tag=YPN_3325 NC_008149.1 Protein Homology CDS 3789048 3790835 . + 0 ID=cds3410;Parent=gene3502;Dbxref=Genbank:WP_002209121.1;Name=WP_002209121.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein DsbD;protein_id=WP_002209121.1;transl_table=11 NC_008149.1 RefSeq gene 3790897 3793044 . - . ID=gene3503;Name=YPN_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17540;old_locus_tag=YPN_3326 NC_008149.1 Protein Homology CDS 3790897 3793044 . - 0 ID=cds3411;Parent=gene3503;Dbxref=Genbank:WP_002209120.1;Name=WP_002209120.1;Note=selenocysteine-containing polypeptide%3B hydrogen linked formate dehydrogenase which catalyzes the oxidation of formate;gbkey=CDS;product=formate dehydrogenase;protein_id=WP_002209120.1;transl_table=11 NC_008149.1 RefSeq gene 3793067 3793624 . - . ID=gene3504;Name=YPN_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17545;old_locus_tag=YPN_3327 NC_008149.1 Protein Homology CDS 3793067 3793624 . - 0 ID=cds3412;Parent=gene3504;Dbxref=Genbank:WP_002209119.1;Name=WP_002209119.1;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=WP_002209119.1;transl_table=11 NC_008149.1 RefSeq gene 3793647 3795662 . - . ID=gene3505;Name=YPN_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17550;old_locus_tag=YPN_3328 NC_008149.1 Protein Homology CDS 3793647 3795662 . - 0 ID=cds3413;Parent=gene3505;Dbxref=Genbank:WP_002209118.1;Name=WP_002209118.1;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic);gbkey=CDS;product=oxidoreductase Fe-S-binding subunit;protein_id=WP_002209118.1;transl_table=11 NC_008149.1 RefSeq gene 3796082 3796657 . + . ID=gene3506;Name=YPN_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17555;old_locus_tag=YPN_3329 NC_008149.1 Protein Homology CDS 3796082 3796657 . + 0 ID=cds3414;Parent=gene3506;Dbxref=Genbank:WP_002209117.1;Name=WP_002209117.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3796779 3796882 . + . ID=id310;gbkey=repeat_region NC_008149.1 RefSeq gene 3796802 3796877 . + . ID=gene3507;Name=YPN_RS17560;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS17560;old_locus_tag=YPN_r101 NC_008149.1 tRNAscan-SE tRNA 3796802 3796877 . + . ID=rna86;Parent=gene3507;anticodon=(pos:3796835..3796837);gbkey=tRNA;product=tRNA-Phe NC_008149.1 tRNAscan-SE exon 3796802 3796877 . + . ID=id311;Parent=rna86;anticodon=(pos:3796835..3796837);gbkey=tRNA;product=tRNA-Phe NC_008149.1 RefSeq gene 3797311 3799866 . - . ID=gene3508;Name=YPN_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17565;old_locus_tag=YPN_3330 NC_008149.1 Protein Homology CDS 3797311 3799866 . - 0 ID=cds3415;Parent=gene3508;Dbxref=Genbank:WP_002209115.1;Name=WP_002209115.1;gbkey=CDS;product=viral enhancin protein;protein_id=WP_002209115.1;transl_table=11 NC_008149.1 RefSeq gene 3799896 3800063 . - . ID=gene3509;Name=YPN_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17570;old_locus_tag=YPN_3331 NC_008149.1 Protein Homology CDS 3799896 3800063 . - 0 ID=cds3416;Parent=gene3509;Dbxref=Genbank:WP_002209114.1;Name=WP_002209114.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209114.1;transl_table=11 NC_008149.1 RefSeq gene 3800293 3800718 . + . ID=gene3510;Name=YPN_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17575;old_locus_tag=YPN_3332 NC_008149.1 Protein Homology CDS 3800293 3800718 . + 0 ID=cds3417;Parent=gene3510;Dbxref=Genbank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;product=subtilase;protein_id=WP_002209112.1;transl_table=11 NC_008149.1 RefSeq gene 3801154 3801420 . - . ID=gene3511;Name=YPN_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17580;old_locus_tag=YPN_3334 NC_008149.1 Protein Homology CDS 3801154 3801420 . - 0 ID=cds3418;Parent=gene3511;Dbxref=Genbank:WP_002217947.1;Name=WP_002217947.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217947.1;transl_table=11 NC_008149.1 RefSeq gene 3801574 3802608 . + . ID=gene3512;Name=YPN_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17585;old_locus_tag=YPN_3335 NC_008149.1 Protein Homology CDS 3801574 3802608 . + 0 ID=cds3419;Parent=gene3512;Dbxref=Genbank:WP_002209111.1;Name=WP_002209111.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;product=l-rhamnose-proton symporter;protein_id=WP_002209111.1;transl_table=11 NC_008149.1 RefSeq gene 3802757 3803629 . - . ID=gene3513;Name=YPN_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17590;old_locus_tag=YPN_3337 NC_008149.1 Protein Homology CDS 3802757 3803629 . - 0 ID=cds3420;Parent=gene3513;Dbxref=Genbank:WP_002209110.1;Name=WP_002209110.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;product=HTH-type transcriptional activator RhaR;protein_id=WP_002209110.1;transl_table=11 NC_008149.1 RefSeq gene 3803762 3804583 . - . ID=gene3514;Name=YPN_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17595;old_locus_tag=YPN_3338 NC_008149.1 Protein Homology CDS 3803762 3804583 . - 0 ID=cds3421;Parent=gene3514;Dbxref=Genbank:WP_002209108.1;Name=WP_002209108.1;gbkey=CDS;product=transcriptional activator RhaS;protein_id=WP_002209108.1;transl_table=11 NC_008149.1 RefSeq gene 3804665 3804808 . - . ID=gene3515;Name=YPN_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17600 NC_008149.1 Protein Homology CDS 3804665 3804808 . - 0 ID=cds3422;Parent=gene3515;Dbxref=Genbank:WP_002209107.1;Name=WP_002209107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209107.1;transl_table=11 NC_008149.1 RefSeq gene 3804805 3805011 . - . ID=gene3516;Name=YPN_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17605 NC_008149.1 Protein Homology CDS 3804805 3805011 . - 0 ID=cds3423;Parent=gene3516;Dbxref=Genbank:WP_002209106.1;Name=WP_002209106.1;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_002209106.1;transl_table=11 NC_008149.1 RefSeq gene 3805010 3806467 . + . ID=gene3517;Name=YPN_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17610;old_locus_tag=YPN_3340 NC_008149.1 Protein Homology CDS 3805010 3806467 . + 0 ID=cds3424;Parent=gene3517;Dbxref=Genbank:WP_002209105.1;Name=WP_002209105.1;gbkey=CDS;product=rhamnulokinase;protein_id=WP_002209105.1;transl_table=11 NC_008149.1 RefSeq gene 3806464 3807720 . + . ID=gene3518;Name=YPN_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17615;old_locus_tag=YPN_3341 NC_008149.1 Protein Homology CDS 3806464 3807720 . + 0 ID=cds3425;Parent=gene3518;Dbxref=Genbank:WP_002209104.1;Name=WP_002209104.1;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;gbkey=CDS;product=L-rhamnose isomerase;protein_id=WP_002209104.1;transl_table=11 NC_008149.1 RefSeq gene 3807733 3808557 . + . ID=gene3519;Name=YPN_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17620;old_locus_tag=YPN_3342 NC_008149.1 Protein Homology CDS 3807733 3808557 . + 0 ID=cds3426;Parent=gene3519;Dbxref=Genbank:WP_002209103.1;Name=WP_002209103.1;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=WP_002209103.1;transl_table=11 NC_008149.1 RefSeq gene 3808624 3809772 . + . ID=gene3520;Name=YPN_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17625;old_locus_tag=YPN_3343 NC_008149.1 Protein Homology CDS 3808624 3809772 . + 0 ID=cds3427;Parent=gene3520;Dbxref=Genbank:WP_002209102.1;Name=WP_002209102.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_002209102.1;transl_table=11 NC_008149.1 RefSeq gene 3809786 3810100 . + . ID=gene3521;Name=YPN_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17630;old_locus_tag=YPN_3344 NC_008149.1 Protein Homology CDS 3809786 3810100 . + 0 ID=cds3428;Parent=gene3521;Dbxref=Genbank:WP_002209101.1;Name=WP_002209101.1;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11 NC_008149.1 RefSeq gene 3810311 3810859 . - . ID=gene3522;Name=YPN_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17635;old_locus_tag=YPN_3345 NC_008149.1 Protein Homology CDS 3810311 3810859 . - 0 ID=cds3429;Parent=gene3522;Dbxref=Genbank:WP_002209100.1;Name=WP_002209100.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_002209100.1;transl_table=11 NC_008149.1 RefSeq gene 3811317 3814160 . + . ID=gene3523;Name=YPN_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17640;old_locus_tag=YPN_3346 NC_008149.1 Protein Homology CDS 3811317 3814160 . + 0 ID=cds3430;Parent=gene3523;Dbxref=Genbank:WP_002209099.1;Name=WP_002209099.1;gbkey=CDS;product=UvrABC system protein A;protein_id=WP_002209099.1;transl_table=11 NC_008149.1 RefSeq gene 3814253 3814612 . - . ID=gene3524;Name=YPN_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17645;old_locus_tag=YPN_3347 NC_008149.1 Protein Homology CDS 3814253 3814612 . - 0 ID=cds3431;Parent=gene3524;Dbxref=Genbank:WP_002209098.1;Name=WP_002209098.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209098.1;transl_table=11 NC_008149.1 RefSeq gene 3815139 3816332 . - . ID=gene3525;Name=YPN_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17650;old_locus_tag=YPN_3348 NC_008149.1 Protein Homology CDS 3815139 3816332 . - 0 ID=cds3432;Parent=gene3525;Dbxref=Genbank:WP_002209097.1;Name=WP_002209097.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=WP_002209097.1;transl_table=11 NC_008149.1 RefSeq gene 3816518 3817597 . - . ID=gene3526;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YPN_RS17655;old_locus_tag=YPN_3349 NC_008149.1 Protein Homology CDS 3816518 3817597 . - 0 ID=cds3433;Parent=gene3526;Dbxref=Genbank:WP_002209096.1;Name=WP_002209096.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=WP_002209096.1;transl_table=11 NC_008149.1 RefSeq gene 3817694 3819100 . - . ID=gene3527;Name=YPN_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17660;old_locus_tag=YPN_3350 NC_008149.1 Protein Homology CDS 3817694 3819100 . - 0 ID=cds3434;Parent=gene3527;Dbxref=Genbank:WP_002209095.1;Name=WP_002209095.1;Note=unwinds double stranded DNA;gbkey=CDS;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11 NC_008149.1 RefSeq gene 3819432 3820415 . + . ID=gene3528;Name=YPN_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17665;old_locus_tag=YPN_3351 NC_008149.1 Protein Homology CDS 3819432 3820415 . + 0 ID=cds3435;Parent=gene3528;Dbxref=Genbank:WP_002209094.1;Name=WP_002209094.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002209094.1;transl_table=11 NC_008149.1 RefSeq gene 3820760 3820978 . - . ID=gene3529;Name=YPN_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17670;old_locus_tag=YPN_3352 NC_008149.1 Protein Homology CDS 3820760 3820978 . - 0 ID=cds3436;Parent=gene3529;Dbxref=Genbank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;product=phage-shock protein;protein_id=WP_002209093.1;transl_table=11 NC_008149.1 RefSeq gene 3821494 3822531 . - . ID=gene3530;Name=YPN_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17675;old_locus_tag=YPN_3353 NC_008149.1 Protein Homology CDS 3821494 3822531 . - 0 ID=cds3437;Parent=gene3530;Dbxref=Genbank:WP_002209092.1;Name=WP_002209092.1;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=WP_002209092.1;transl_table=11 NC_008149.1 RefSeq gene 3822786 3823295 . + . ID=gene3531;Name=YPN_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17680;old_locus_tag=YPN_3354 NC_008149.1 Protein Homology CDS 3822786 3823295 . + 0 ID=cds3438;Parent=gene3531;Dbxref=Genbank:WP_002214647.1;Name=WP_002214647.1;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214647.1;transl_table=11 NC_008149.1 RefSeq gene 3823483 3824091 . - . ID=gene3532;Name=YPN_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17685;old_locus_tag=YPN_3355 NC_008149.1 Protein Homology CDS 3823483 3824091 . - 0 ID=cds3439;Parent=gene3532;Dbxref=Genbank:WP_002209090.1;Name=WP_002209090.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;product=LexA repressor;protein_id=WP_002209090.1;transl_table=11 NC_008149.1 RefSeq gene 3824216 3824587 . - . ID=gene3533;Name=YPN_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17690;old_locus_tag=YPN_3356 NC_008149.1 Protein Homology CDS 3824216 3824587 . - 0 ID=cds3440;Parent=gene3533;Dbxref=Genbank:WP_002209089.1;Name=WP_002209089.1;Note=catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate;gbkey=CDS;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11 NC_008149.1 RefSeq gene 3824715 3827192 . + . ID=gene3534;Name=YPN_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17695;old_locus_tag=YPN_3357 NC_008149.1 Protein Homology CDS 3824715 3827192 . + 0 ID=cds3441;Parent=gene3534;Dbxref=Genbank:WP_002214644.1;Name=WP_002214644.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_002214644.1;transl_table=11 NC_008149.1 RefSeq gene 3827373 3828239 . - . ID=gene3535;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=YPN_RS17700;old_locus_tag=YPN_3358 NC_008149.1 Protein Homology CDS 3827373 3828239 . - 0 ID=cds3442;Parent=gene3535;Dbxref=Genbank:WP_002209088.1;Name=WP_002209088.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_002209088.1;transl_table=11 NC_008149.1 RefSeq gene 3828405 3828929 . - . ID=gene3536;Name=YPN_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17705;old_locus_tag=YPN_3359 NC_008149.1 Protein Homology CDS 3828405 3828929 . - 0 ID=cds3443;Parent=gene3536;Dbxref=Genbank:WP_002209087.1;Name=WP_002209087.1;gbkey=CDS;product=Chorismate pyruvate-lyase;protein_id=WP_002209087.1;transl_table=11 NC_008149.1 RefSeq gene 3829761 3833570 . + . ID=gene3537;Name=YPN_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17710;old_locus_tag=YPN_3360 NC_008149.1 Protein Homology CDS 3829761 3833570 . + 0 ID=cds3444;Parent=gene3537;Dbxref=Genbank:WP_002221634.1;Name=WP_002221634.1;gbkey=CDS;product=autotransporter;protein_id=WP_002221634.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3831440 3833578 . + . ID=id312;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 3833717 3833891 . + . ID=id313;gbkey=repeat_region NC_008149.1 RefSeq gene 3833914 3835971 . - . ID=gene3538;Name=YPN_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17715;old_locus_tag=YPN_3361 NC_008149.1 Protein Homology CDS 3833914 3835971 . - 0 ID=cds3445;Parent=gene3538;Dbxref=Genbank:WP_002209085.1;Name=WP_002209085.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002209085.1;transl_table=11 NC_008149.1 RefSeq gene 3836260 3836463 . - . ID=gene3539;Name=YPN_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17720 NC_008149.1 Protein Homology CDS 3836260 3836463 . - 0 ID=cds3446;Parent=gene3539;Dbxref=Genbank:WP_002228683.1;Name=WP_002228683.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228683.1;transl_table=11 NC_008149.1 RefSeq gene 3836980 3838299 . - . ID=gene3540;Name=YPN_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17725;old_locus_tag=YPN_3362 NC_008149.1 Protein Homology CDS 3836980 3838299 . - 0 ID=cds3447;Parent=gene3540;Dbxref=Genbank:WP_002214633.1;Name=WP_002214633.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214633.1;transl_table=11 NC_008149.1 RefSeq gene 3839492 3839746 . - . ID=gene3541;Name=YPN_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17730;old_locus_tag=YPN_3363 NC_008149.1 Protein Homology CDS 3839492 3839746 . - 0 ID=cds3448;Parent=gene3541;Dbxref=Genbank:WP_002214631.1;Name=WP_002214631.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214631.1;transl_table=11 NC_008149.1 RefSeq gene 3839757 3840500 . - . ID=gene3542;Name=YPN_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17735;old_locus_tag=YPN_3364 NC_008149.1 Protein Homology CDS 3839757 3840500 . - 0 ID=cds3449;Parent=gene3542;Dbxref=Genbank:WP_002209082.1;Name=WP_002209082.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209082.1;transl_table=11 NC_008149.1 RefSeq gene 3840572 3842950 . - . ID=gene3543;Name=YPN_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17740;old_locus_tag=YPN_3365 NC_008149.1 Protein Homology CDS 3840572 3842950 . - 0 ID=cds3450;Parent=gene3543;Dbxref=Genbank:WP_002209081.1;Name=WP_002209081.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209081.1;transl_table=11 NC_008149.1 RefSeq gene 3843201 3843839 . - . ID=gene3544;Name=YPN_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17745;old_locus_tag=YPN_3366 NC_008149.1 Protein Homology CDS 3843201 3843839 . - 0 ID=cds3451;Parent=gene3544;Dbxref=Genbank:WP_002209080.1;Name=WP_002209080.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209080.1;transl_table=11 NC_008149.1 RefSeq gene 3844552 3845127 . - . ID=gene3545;Name=YPN_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17750;old_locus_tag=YPN_3367 NC_008149.1 Protein Homology CDS 3844552 3845127 . - 0 ID=cds3452;Parent=gene3545;Dbxref=Genbank:WP_002209079.1;Name=WP_002209079.1;gbkey=CDS;product=tellurium resistance protein TerE;protein_id=WP_002209079.1;transl_table=11 NC_008149.1 RefSeq gene 3845311 3845889 . - . ID=gene3546;Name=YPN_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17755;old_locus_tag=YPN_3368 NC_008149.1 Protein Homology CDS 3845311 3845889 . - 0 ID=cds3453;Parent=gene3546;Dbxref=Genbank:WP_002209078.1;Name=WP_002209078.1;gbkey=CDS;product=chemical-damaging agent resistance protein C;protein_id=WP_002209078.1;transl_table=11 NC_008149.1 RefSeq gene 3845953 3846990 . - . ID=gene3547;Name=YPN_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17760;old_locus_tag=YPN_3369 NC_008149.1 Protein Homology CDS 3845953 3846990 . - 0 ID=cds3454;Parent=gene3547;Dbxref=Genbank:WP_002209077.1;Name=WP_002209077.1;gbkey=CDS;product=tellurium resistance protein TerC;protein_id=WP_002209077.1;transl_table=11 NC_008149.1 RefSeq gene 3847012 3847467 . - . ID=gene3548;Name=YPN_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17765;old_locus_tag=YPN_3370 NC_008149.1 Protein Homology CDS 3847012 3847467 . - 0 ID=cds3455;Parent=gene3548;Dbxref=Genbank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209076.1;transl_table=11 NC_008149.1 RefSeq gene 3847500 3848684 . - . ID=gene3549;Name=YPN_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17770;old_locus_tag=YPN_3371 NC_008149.1 Protein Homology CDS 3847500 3848684 . - 0 ID=cds3456;Parent=gene3549;Dbxref=Genbank:WP_002209075.1;Name=WP_002209075.1;gbkey=CDS;product=tellurite resistance protein;protein_id=WP_002209075.1;transl_table=11 NC_008149.1 RefSeq gene 3848684 3849277 . - . ID=gene3550;Name=YPN_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17775;old_locus_tag=YPN_3372 NC_008149.1 Protein Homology CDS 3848684 3849277 . - 0 ID=cds3457;Parent=gene3550;Dbxref=Genbank:WP_002228131.1;Name=WP_002228131.1;gbkey=CDS;product=tellurium resistance protein TerZ;protein_id=WP_002228131.1;transl_table=11 NC_008149.1 RefSeq gene 3849553 3850614 . + . ID=gene3551;Name=YPN_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17780;old_locus_tag=YPN_3373 NC_008149.1 Protein Homology CDS 3849553 3850614 . + 0 ID=cds3458;Parent=gene3551;Dbxref=Genbank:WP_002209073.1;Name=WP_002209073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209073.1;transl_table=11 NC_008149.1 RefSeq gene 3850626 3851762 . + . ID=gene3552;Name=YPN_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17785;old_locus_tag=YPN_3374 NC_008149.1 Protein Homology CDS 3850626 3851762 . + 0 ID=cds3459;Parent=gene3552;Dbxref=Genbank:WP_002209072.1;Name=WP_002209072.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209072.1;transl_table=11 NC_008149.1 RefSeq gene 3851755 3852567 . + . ID=gene3553;Name=YPN_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17790;old_locus_tag=YPN_3375 NC_008149.1 Protein Homology CDS 3851755 3852567 . + 0 ID=cds3460;Parent=gene3553;Dbxref=Genbank:WP_002209071.1;Name=WP_002209071.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209071.1;transl_table=11 NC_008149.1 RefSeq gene 3852560 3853639 . + . ID=gene3554;Name=YPN_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17795;old_locus_tag=YPN_3376 NC_008149.1 Protein Homology CDS 3852560 3853639 . + 0 ID=cds3461;Parent=gene3554;Dbxref=Genbank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209070.1;transl_table=11 NC_008149.1 RefSeq gene 3853639 3854598 . + . ID=gene3555;Name=YPN_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17800;old_locus_tag=YPN_3377 NC_008149.1 Protein Homology CDS 3853639 3854598 . + 0 ID=cds3462;Parent=gene3555;Dbxref=Genbank:WP_002209069.1;Name=WP_002209069.1;gbkey=CDS;product=ATP-binding protein;protein_id=WP_002209069.1;transl_table=11 NC_008149.1 RefSeq gene 3854995 3855483 . + . ID=gene3556;Name=YPN_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17805;old_locus_tag=YPN_3378 NC_008149.1 Protein Homology CDS 3854995 3855483 . + 0 ID=cds3463;Parent=gene3556;Dbxref=Genbank:WP_002209068.1;Name=WP_002209068.1;gbkey=CDS;product=tellurium resistance protein TerW;protein_id=WP_002209068.1;transl_table=11 NC_008149.1 RefSeq gene 3855798 3856598 . + . ID=gene3557;Name=YPN_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17810;old_locus_tag=YPN_3379 NC_008149.1 Protein Homology CDS 3855798 3856598 . + 0 ID=cds3464;Parent=gene3557;Dbxref=Genbank:WP_002209067.1;Name=WP_002209067.1;gbkey=CDS;product=methylenetetrahydrofolate reductase;protein_id=WP_002209067.1;transl_table=11 NC_008149.1 RefSeq gene 3856939 3858252 . + . ID=gene3558;Name=YPN_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17815;old_locus_tag=YPN_3380 NC_008149.1 Protein Homology CDS 3856939 3858252 . + 0 ID=cds3465;Parent=gene3558;Dbxref=Genbank:WP_002209066.1;Name=WP_002209066.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;product=heme utilization radical SAM enzyme HutW;protein_id=WP_002209066.1;transl_table=11 NC_008149.1 RefSeq gene 3858285 3858794 . + . ID=gene3559;Name=YPN_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17820;old_locus_tag=YPN_3381 NC_008149.1 Protein Homology CDS 3858285 3858794 . + 0 ID=cds3466;Parent=gene3559;Dbxref=Genbank:WP_002209065.1;Name=WP_002209065.1;gbkey=CDS;product=heme utilization carrier protein;protein_id=WP_002209065.1;transl_table=11 NC_008149.1 RefSeq gene 3858828 3859478 . + . ID=gene3560;Name=YPN_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17825;old_locus_tag=YPN_3382 NC_008149.1 Protein Homology CDS 3858828 3859478 . + 0 ID=cds3467;Parent=gene3560;Dbxref=Genbank:WP_002209064.1;Name=WP_002209064.1;gbkey=CDS;product=NmrA family protein;protein_id=WP_002209064.1;transl_table=11 NC_008149.1 RefSeq gene 3859893 3861923 . + . ID=gene3561;Name=YPN_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17830;old_locus_tag=YPN_3384 NC_008149.1 Protein Homology CDS 3859893 3861923 . + 0 ID=cds3468;Parent=gene3561;Dbxref=Genbank:WP_002209062.1;Name=WP_002209062.1;gbkey=CDS;product=hemin receptor;protein_id=WP_002209062.1;transl_table=11 NC_008149.1 RefSeq gene 3862042 3863079 . + . ID=gene3562;Name=YPN_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17835;old_locus_tag=YPN_3385 NC_008149.1 Protein Homology CDS 3862042 3863079 . + 0 ID=cds3469;Parent=gene3562;Dbxref=Genbank:WP_002209061.1;Name=WP_002209061.1;gbkey=CDS;product=hemin transporter HmuS;protein_id=WP_002209061.1;transl_table=11 NC_008149.1 RefSeq gene 3863076 3863915 . + . ID=gene3563;Name=YPN_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17840;old_locus_tag=YPN_3386 NC_008149.1 Protein Homology CDS 3863076 3863915 . + 0 ID=cds3470;Parent=gene3563;Dbxref=Genbank:WP_002209060.1;Name=WP_002209060.1;gbkey=CDS;product=hemin-binding periplasmic protein HmuT;protein_id=WP_002209060.1;transl_table=11 NC_008149.1 RefSeq gene 3863912 3864916 . + . ID=gene3564;Name=YPN_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17845;old_locus_tag=YPN_3387 NC_008149.1 Protein Homology CDS 3863912 3864916 . + 0 ID=cds3471;Parent=gene3564;Dbxref=Genbank:WP_002209059.1;Name=WP_002209059.1;gbkey=CDS;product=hemin ABC transporter permease;protein_id=WP_002209059.1;transl_table=11 NC_008149.1 RefSeq gene 3864909 3865709 . + . ID=gene3565;Name=hmuV;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;locus_tag=YPN_RS17850;old_locus_tag=YPN_3388 NC_008149.1 Protein Homology CDS 3864909 3865709 . + 0 ID=cds3472;Parent=gene3565;Dbxref=Genbank:WP_002209058.1;Name=WP_002209058.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin import ATP-binding protein HmuV;protein_id=WP_002209058.1;transl_table=11 NC_008149.1 RefSeq gene 3865850 3867031 . - . ID=gene3566;Name=YPN_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17855;old_locus_tag=YPN_3389 NC_008149.1 Protein Homology CDS 3865850 3867031 . - 0 ID=cds3473;Parent=gene3566;Dbxref=Genbank:WP_002215044.1;Name=WP_002215044.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;product=cystathionine beta-lyase;protein_id=WP_002215044.1;transl_table=11 NC_008149.1 RefSeq gene 3867077 3868363 . - . ID=gene3567;Name=YPN_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17860;old_locus_tag=YPN_3390 NC_008149.1 Protein Homology CDS 3867077 3868363 . - 0 ID=cds3474;Parent=gene3567;Dbxref=Genbank:WP_002209057.1;Name=WP_002209057.1;gbkey=CDS;product=transporter;protein_id=WP_002209057.1;transl_table=11 NC_008149.1 RefSeq gene 3868533 3869516 . + . ID=gene3568;Name=YPN_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17865;old_locus_tag=YPN_3391 NC_008149.1 Protein Homology CDS 3868533 3869516 . + 0 ID=cds3475;Parent=gene3568;Dbxref=Genbank:WP_002209056.1;Name=WP_002209056.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002209056.1;transl_table=11 NC_008149.1 RefSeq gene 3869594 3869863 . - . ID=gene3569;Name=YPN_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17870;old_locus_tag=YPN_3392 NC_008149.1 Protein Homology CDS 3869594 3869863 . - 0 ID=cds3476;Parent=gene3569;Dbxref=Genbank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209055.1;transl_table=11 NC_008149.1 RefSeq gene 3869860 3871074 . - . ID=gene3570;Name=YPN_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17875;old_locus_tag=YPN_3393 NC_008149.1 Protein Homology CDS 3869860 3871074 . - 0 ID=cds3477;Parent=gene3570;Dbxref=Genbank:WP_002209054.1;Name=WP_002209054.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209054.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3871167 3871338 . + . ID=id314;gbkey=repeat_region NC_008149.1 RefSeq gene 3871457 3872524 . - . ID=gene3571;Name=YPN_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17880;old_locus_tag=YPN_3394 NC_008149.1 Protein Homology CDS 3871457 3872524 . - 0 ID=cds3478;Parent=gene3571;Dbxref=Genbank:WP_002209053.1;Name=WP_002209053.1;gbkey=CDS;product=secretion system apparatus protein SsaU;protein_id=WP_002209053.1;transl_table=11 NC_008149.1 RefSeq gene 3872514 3873308 . - . ID=gene3572;Name=YPN_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17885;old_locus_tag=YPN_3395 NC_008149.1 Protein Homology CDS 3872514 3873308 . - 0 ID=cds3479;Parent=gene3572;Dbxref=Genbank:WP_002209052.1;Name=WP_002209052.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209052.1;transl_table=11 NC_008149.1 RefSeq gene 3873310 3873603 . - . ID=gene3573;Name=YPN_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17890;old_locus_tag=YPN_3396 NC_008149.1 Protein Homology CDS 3873310 3873603 . - 0 ID=cds3480;Parent=gene3573;Dbxref=Genbank:WP_002209051.1;Name=WP_002209051.1;gbkey=CDS;product=type III secretion system protein SsaS;protein_id=WP_002209051.1;transl_table=11 NC_008149.1 RefSeq gene 3873600 3874250 . - . ID=gene3574;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;gene_synonym=yscR;locus_tag=YPN_RS17895;old_locus_tag=YPN_3397 NC_008149.1 Protein Homology CDS 3873600 3874250 . - 0 ID=cds3481;Parent=gene3574;Dbxref=Genbank:WP_002221023.1;Name=WP_002221023.1;Note=part of a set of proteins involved in the infection of eukaryotic cells%3B in plant pathogens involved in the hypersensitivity response;gbkey=CDS;gene=ssaR;product=flagellar biosynthesis protein FliP;protein_id=WP_002221023.1;transl_table=11 NC_008149.1 RefSeq gene 3874377 3875339 . - . ID=gene3575;Name=YPN_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17900;old_locus_tag=YPN_3398 NC_008149.1 Protein Homology CDS 3874377 3875339 . - 0 ID=cds3482;Parent=gene3575;Dbxref=Genbank:WP_002209049.1;Name=WP_002209049.1;gbkey=CDS;product=type III secretion protein SsaQ;protein_id=WP_002209049.1;transl_table=11 NC_008149.1 RefSeq gene 3875317 3875715 . - . ID=gene3576;Name=YPN_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17905;old_locus_tag=YPN_3399 NC_008149.1 Protein Homology CDS 3875317 3875715 . - 0 ID=cds3483;Parent=gene3576;Dbxref=Genbank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11 NC_008149.1 RefSeq gene 3875696 3876097 . - . ID=gene3577;Name=YPN_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17910;old_locus_tag=YPN_3400 NC_008149.1 Protein Homology CDS 3875696 3876097 . - 0 ID=cds3484;Parent=gene3577;Dbxref=Genbank:WP_002209047.1;Name=WP_002209047.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002209047.1;transl_table=11 NC_008149.1 RefSeq gene 3876094 3877431 . - . ID=gene3578;Name=YPN_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17915;old_locus_tag=YPN_3401 NC_008149.1 Protein Homology CDS 3876094 3877431 . - 0 ID=cds3485;Parent=gene3578;Dbxref=Genbank:WP_002209046.1;Name=WP_002209046.1;gbkey=CDS;product=type III secretion system ATPase;protein_id=WP_002209046.1;transl_table=11 NC_008149.1 RefSeq gene 3877418 3879473 . - . ID=gene3579;Name=YPN_RS21545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS21545;pseudo=true NC_008149.1 Protein Homology CDS 3877418 3879473 . - 0 ID=cds3486;Parent=gene3579;Note=with SsaC forms part of a protein export system across the inner and outer cell membranes%3B part of the Salmonella pathogenicity island 2%3B part of the type III secretion system;exception=annotated by transcript or proteomic data;gbkey=CDS;product=secretion system apparatus protein SsaV;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 3879460 3880107 . - . ID=gene3580;Name=YPN_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17930;old_locus_tag=YPN_3404 NC_008149.1 Protein Homology CDS 3879460 3880107 . - 0 ID=cds3487;Parent=gene3580;Dbxref=Genbank:WP_002216333.1;Name=WP_002216333.1;gbkey=CDS;product=type III secretion protein HrpE;protein_id=WP_002216333.1;transl_table=11 NC_008149.1 RefSeq gene 3880104 3880697 . - . ID=gene3581;Name=YPN_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17935;old_locus_tag=YPN_3405 NC_008149.1 Protein Homology CDS 3880104 3880697 . - 0 ID=cds3488;Parent=gene3581;Dbxref=Genbank:WP_002209043.1;Name=WP_002209043.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209043.1;transl_table=11 NC_008149.1 RefSeq gene 3880872 3881603 . - . ID=gene3582;Name=YPN_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17940;old_locus_tag=YPN_3406 NC_008149.1 Protein Homology CDS 3880872 3881603 . - 0 ID=cds3489;Parent=gene3582;Dbxref=Genbank:WP_002209042.1;Name=WP_002209042.1;gbkey=CDS;product=type III secretion protein SsaJ;protein_id=WP_002209042.1;transl_table=11 NC_008149.1 RefSeq gene 3881600 3881851 . - . ID=gene3583;Name=YPN_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17945;old_locus_tag=YPN_3407 NC_008149.1 Protein Homology CDS 3881600 3881851 . - 0 ID=cds3490;Parent=gene3583;Dbxref=Genbank:WP_002209041.1;Name=WP_002209041.1;gbkey=CDS;product=type III secretion apparatus protein%2C YscI/HrpB;protein_id=WP_002209041.1;transl_table=11 NC_008149.1 RefSeq gene 3881949 3882197 . - . ID=gene3584;Name=YPN_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17950;old_locus_tag=YPN_3408 NC_008149.1 Protein Homology CDS 3881949 3882197 . - 0 ID=cds3491;Parent=gene3584;Dbxref=Genbank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;product=type III secretion system protein%2C SsaH family;protein_id=WP_002209040.1;transl_table=11 NC_008149.1 RefSeq gene 3882194 3882409 . - . ID=gene3585;Name=YPN_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17955 NC_008149.1 Protein Homology CDS 3882194 3882409 . - 0 ID=cds3492;Parent=gene3585;Dbxref=Genbank:WP_002228685.1;Name=WP_002228685.1;gbkey=CDS;product=type III secretion protein;protein_id=WP_002228685.1;transl_table=11 NC_008149.1 RefSeq gene 3882419 3883039 . - . ID=gene3586;Name=YPN_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17960;old_locus_tag=YPN_3409 NC_008149.1 Protein Homology CDS 3882419 3883039 . - 0 ID=cds3493;Parent=gene3586;Dbxref=Genbank:WP_002216326.1;Name=WP_002216326.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002216326.1;transl_table=11 NC_008149.1 RefSeq gene 3883213 3883434 . - . ID=gene3587;Name=YPN_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17965;old_locus_tag=YPN_3410 NC_008149.1 Protein Homology CDS 3883213 3883434 . - 0 ID=cds3494;Parent=gene3587;Dbxref=Genbank:WP_002209038.1;Name=WP_002209038.1;gbkey=CDS;product=type III secretion system protein%2C YseE family;protein_id=WP_002209038.1;transl_table=11 NC_008149.1 RefSeq gene 3883453 3884667 . - . ID=gene3588;Name=YPN_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17970;old_locus_tag=YPN_3411 NC_008149.1 Protein Homology CDS 3883453 3884667 . - 0 ID=cds3495;Parent=gene3588;Dbxref=Genbank:WP_002209037.1;Name=WP_002209037.1;gbkey=CDS;product=type III secretion protein SsaD;protein_id=WP_002209037.1;transl_table=11 NC_008149.1 RefSeq gene 3884669 3886168 . - . ID=gene3589;Name=YPN_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17975;old_locus_tag=YPN_3412 NC_008149.1 Protein Homology CDS 3884669 3886168 . - 0 ID=cds3496;Parent=gene3589;Dbxref=Genbank:WP_002353603.1;Name=WP_002353603.1;gbkey=CDS;product=type II secretory pathway protein;protein_id=WP_002353603.1;transl_table=11 NC_008149.1 RefSeq gene 3886412 3889231 . + . ID=gene3590;Name=YPN_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17980;old_locus_tag=YPN_3413 NC_008149.1 Protein Homology CDS 3886412 3889231 . + 0 ID=cds3497;Parent=gene3590;Dbxref=Genbank:WP_002209035.1;Name=WP_002209035.1;Note=phosphorylates the response regulator SsrB%3B is involved in the expression of the virulence genes of Salmonella pathogenicity island-2;gbkey=CDS;product=two-component system sensor histidine kinase/response regulator;protein_id=WP_002209035.1;transl_table=11 NC_008149.1 RefSeq gene 3889244 3889876 . + . ID=gene3591;Name=YPN_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17985;old_locus_tag=YPN_3414 NC_008149.1 Protein Homology CDS 3889244 3889876 . + 0 ID=cds3498;Parent=gene3591;Dbxref=Genbank:WP_002209034.1;Name=WP_002209034.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209034.1;transl_table=11 NC_008149.1 RefSeq gene 3890054 3891370 . - . ID=gene3592;Name=YPN_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17990;old_locus_tag=YPN_3415 NC_008149.1 Protein Homology CDS 3890054 3891370 . - 0 ID=cds3499;Parent=gene3592;Dbxref=Genbank:WP_002209033.1;Name=WP_002209033.1;gbkey=CDS;product=proton glutamate symport protein;protein_id=WP_002209033.1;transl_table=11 NC_008149.1 RefSeq gene 3892225 3894183 . + . ID=gene3593;Name=YPN_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS17995;old_locus_tag=YPN_3416 NC_008149.1 Protein Homology CDS 3892225 3894183 . + 0 ID=cds3500;Parent=gene3593;Dbxref=Genbank:WP_002209031.1;Name=WP_002209031.1;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=WP_002209031.1;transl_table=11 NC_008149.1 RefSeq gene 3894240 3894551 . + . ID=gene3594;Name=YPN_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18000;old_locus_tag=YPN_3417 NC_008149.1 Protein Homology CDS 3894240 3894551 . + 0 ID=cds3501;Parent=gene3594;Dbxref=Genbank:WP_002209030.1;Name=WP_002209030.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209030.1;transl_table=11 NC_008149.1 RefSeq gene 3894548 3896203 . + . ID=gene3595;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=YPN_RS18005;old_locus_tag=YPN_3418 NC_008149.1 Protein Homology CDS 3894548 3896203 . + 0 ID=cds3502;Parent=gene3595;Dbxref=Genbank:WP_002209029.1;Name=WP_002209029.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;product=cation/acetate symporter ActP;protein_id=WP_002209029.1;transl_table=11 NC_008149.1 RefSeq gene 3896277 3897263 . - . ID=gene3596;Name=YPN_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18010;old_locus_tag=YPN_3419 NC_008149.1 Protein Homology CDS 3896277 3897263 . - 0 ID=cds3503;Parent=gene3596;Dbxref=Genbank:WP_002209028.1;Name=WP_002209028.1;gbkey=CDS;product=hydrolase;protein_id=WP_002209028.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3897235 3899191 . + . ID=id315;gbkey=repeat_region NC_008149.1 RefSeq gene 3897322 3898344 . + . ID=gene3597;Name=YPN_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18015;old_locus_tag=YPN_3420 NC_008149.1 Protein Homology CDS 3897322 3898344 . + 0 ID=cds3504;Parent=gene3597;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 3898344 3899123 . + . ID=gene3598;Name=YPN_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18020;old_locus_tag=YPN_3421 NC_008149.1 Protein Homology CDS 3898344 3899123 . + 0 ID=cds3505;Parent=gene3598;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 3899795 3900622 . - . ID=gene3599;Name=YPN_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18025;old_locus_tag=YPN_3422 NC_008149.1 Protein Homology CDS 3899795 3900622 . - 0 ID=cds3506;Parent=gene3599;Dbxref=Genbank:WP_032485896.1;Name=WP_032485896.1;gbkey=CDS;product=transposase;protein_id=WP_032485896.1;transl_table=11 NC_008149.1 RefSeq gene 3900628 3900894 . - . ID=gene3600;Name=YPN_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18030;old_locus_tag=YPN_3423 NC_008149.1 Protein Homology CDS 3900628 3900894 . - 0 ID=cds3507;Parent=gene3600;Dbxref=Genbank:WP_002213260.1;Name=WP_002213260.1;gbkey=CDS;product=transposase;protein_id=WP_002213260.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3900977 3906868 . + . ID=id316;gbkey=repeat_region NC_008149.1 RefSeq gene 3901142 3901339 . - . ID=gene3601;Name=YPN_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18035 NC_008149.1 Protein Homology CDS 3901142 3901339 . - 0 ID=cds3508;Parent=gene3601;Dbxref=Genbank:WP_048814505.1;Name=WP_048814505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_048814505.1;transl_table=11 NC_008149.1 RefSeq gene 3901361 3901476 . - . ID=gene3602;Name=YPN_RS18040;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS18040;old_locus_tag=YPN_r102 NC_008149.1 cmsearch rRNA 3901361 3901476 . - . ID=rna87;Parent=gene3602;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 cmsearch exon 3901361 3901476 . - . ID=id317;Parent=rna87;gbkey=rRNA;product=5S ribosomal RNA NC_008149.1 RefSeq gene 3901568 3904501 . - . ID=gene3603;Name=YPN_RS18045;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS18045;old_locus_tag=YPN_r103 NC_008149.1 RefSeq rRNA 3901568 3904501 . - . ID=rna88;Parent=gene3603;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq exon 3901568 3904501 . - . ID=id318;Parent=rna88;gbkey=rRNA;product=23S ribosomal RNA NC_008149.1 RefSeq gene 3904745 3904820 . - . ID=gene3604;Name=YPN_RS18050;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS18050;old_locus_tag=YPN_r104 NC_008149.1 tRNAscan-SE tRNA 3904745 3904820 . - . ID=rna89;Parent=gene3604;anticodon=(pos:complement(3904784..3904786));gbkey=tRNA;product=tRNA-Glu NC_008149.1 tRNAscan-SE exon 3904745 3904820 . - . ID=id319;Parent=rna89;anticodon=(pos:complement(3904784..3904786));gbkey=tRNA;product=tRNA-Glu NC_008149.1 RefSeq gene 3904954 3906502 . - . ID=gene3605;Name=YPN_RS18055;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPN_RS18055;old_locus_tag=YPN_r105 NC_008149.1 RefSeq rRNA 3904954 3906502 . - . ID=rna90;Parent=gene3605;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq exon 3904954 3906502 . - . ID=id320;Parent=rna90;gbkey=rRNA;product=16S ribosomal RNA NC_008149.1 RefSeq repeat_region 3907067 3909024 . + . ID=id321;gbkey=repeat_region NC_008149.1 RefSeq gene 3907155 3908177 . + . ID=gene3606;Name=YPN_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18060;old_locus_tag=YPN_3425 NC_008149.1 Protein Homology CDS 3907155 3908177 . + 0 ID=cds3509;Parent=gene3606;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 3908177 3908956 . + . ID=gene3607;Name=YPN_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18065;old_locus_tag=YPN_3426 NC_008149.1 Protein Homology CDS 3908177 3908956 . + 0 ID=cds3510;Parent=gene3607;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 3908969 3909907 . + . ID=gene3608;Name=YPN_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18070;old_locus_tag=YPN_3427 NC_008149.1 Protein Homology CDS 3908969 3909907 . + 0 ID=cds3511;Parent=gene3608;Dbxref=Genbank:WP_042468698.1;Name=WP_042468698.1;gbkey=CDS;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_042468698.1;transl_table=11 NC_008149.1 RefSeq gene 3910038 3910931 . - . ID=gene3609;Name=YPN_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18075;old_locus_tag=YPN_3428 NC_008149.1 Protein Homology CDS 3910038 3910931 . - 0 ID=cds3512;Parent=gene3609;Dbxref=Genbank:WP_002210151.1;Name=WP_002210151.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002210151.1;transl_table=11 NC_008149.1 RefSeq gene 3911193 3911897 . + . ID=gene3610;Name=YPN_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18080;old_locus_tag=YPN_3429 NC_008149.1 Protein Homology CDS 3911193 3911897 . + 0 ID=cds3513;Parent=gene3610;Dbxref=Genbank:WP_002210150.1;Name=WP_002210150.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210150.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3911931 3912345 . + . ID=id322;gbkey=repeat_region NC_008149.1 RefSeq gene 3912323 3912701 . - . ID=gene3611;Name=YPN_RS21550;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=YPN_RS21550 NC_008149.1 cmsearch ncRNA 3912323 3912701 . - . ID=rna91;Parent=gene3611;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_008149.1 cmsearch exon 3912323 3912701 . - . ID=id323;Parent=rna91;gbkey=ncRNA;ncrna_class=RNase_P_RNA;product=bacterial RNase P NC_008149.1 RefSeq gene 3912721 3913620 . - . ID=gene3612;Name=YPN_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18085;old_locus_tag=YPN_3430 NC_008149.1 Protein Homology CDS 3912721 3913620 . - 0 ID=cds3514;Parent=gene3612;Dbxref=Genbank:WP_002210149.1;Name=WP_002210149.1;gbkey=CDS;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11 NC_008149.1 RefSeq gene 3913683 3915656 . + . ID=gene3613;Name=YPN_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18090;old_locus_tag=YPN_3431 NC_008149.1 Protein Homology CDS 3913683 3915656 . + 0 ID=cds3515;Parent=gene3613;Dbxref=Genbank:WP_002228200.1;Name=WP_002228200.1;gbkey=CDS;product=penicillin-binding protein activator LpoA;protein_id=WP_002228200.1;transl_table=11 NC_008149.1 RefSeq gene 3915740 3916093 . + . ID=gene3614;Name=YPN_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18095;old_locus_tag=YPN_3432 NC_008149.1 Protein Homology CDS 3915740 3916093 . + 0 ID=cds3516;Parent=gene3614;Dbxref=Genbank:WP_002210147.1;Name=WP_002210147.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210147.1;transl_table=11 NC_008149.1 RefSeq gene 3916364 3916954 . + . ID=gene3615;Name=YPN_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18100;old_locus_tag=YPN_3433 NC_008149.1 Protein Homology CDS 3916364 3916954 . + 0 ID=cds3517;Parent=gene3615;Dbxref=Genbank:WP_002210146.1;Name=WP_002210146.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=WP_002210146.1;transl_table=11 NC_008149.1 RefSeq gene 3916965 3917540 . + . ID=gene3616;Name=YPN_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18105;old_locus_tag=YPN_3434 NC_008149.1 Protein Homology CDS 3916965 3917540 . + 0 ID=cds3518;Parent=gene3616;Dbxref=Genbank:WP_002210145.1;Name=WP_002210145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210145.1;transl_table=11 NC_008149.1 RefSeq gene 3917747 3918472 . - . ID=gene3617;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=YPN_RS18110;old_locus_tag=YPN_3435 NC_008149.1 Protein Homology CDS 3917747 3918472 . - 0 ID=cds3519;Parent=gene3617;Dbxref=Genbank:WP_002210144.1;Name=WP_002210144.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_002210144.1;transl_table=11 NC_008149.1 RefSeq gene 3918469 3919122 . - . ID=gene3618;Name=YPN_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18115;old_locus_tag=YPN_3436 NC_008149.1 Protein Homology CDS 3918469 3919122 . - 0 ID=cds3520;Parent=gene3618;Dbxref=Genbank:WP_002210143.1;Name=WP_002210143.1;gbkey=CDS;product=isoprenoid biosynthesis protein;protein_id=WP_002210143.1;transl_table=11 NC_008149.1 RefSeq gene 3919152 3919346 . - . ID=gene3619;Name=YPN_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18120 NC_008149.1 Protein Homology CDS 3919152 3919346 . - 0 ID=cds3521;Parent=gene3619;Dbxref=Genbank:WP_002228201.1;Name=WP_002228201.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228201.1;transl_table=11 NC_008149.1 RefSeq gene 3919364 3921700 . - . ID=gene3620;Name=YPN_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18125;old_locus_tag=YPN_3437 NC_008149.1 Protein Homology CDS 3919364 3921700 . - 0 ID=cds3522;Parent=gene3620;Dbxref=Genbank:WP_002210142.1;Name=WP_002210142.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;product=PAS domain-containing two-component system sensor histidine kinase/response regulator;protein_id=WP_002210142.1;transl_table=11 NC_008149.1 RefSeq gene 3921768 3921983 . - . ID=gene3621;Name=YPN_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18130 NC_008149.1 Protein Homology CDS 3921768 3921983 . - 0 ID=cds3523;Parent=gene3621;Dbxref=Genbank:WP_002216211.1;Name=WP_002216211.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216211.1;transl_table=11 NC_008149.1 RefSeq gene 3921964 3922887 . - . ID=gene3622;Name=YPN_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18135;old_locus_tag=YPN_3438 NC_008149.1 Protein Homology CDS 3921964 3922887 . - 0 ID=cds3524;Parent=gene3622;Dbxref=Genbank:WP_002210140.1;Name=WP_002210140.1;gbkey=CDS;product=radical SAM protein;protein_id=WP_002210140.1;transl_table=11 NC_008149.1 RefSeq gene 3923710 3928167 . + . ID=gene3623;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=YPN_RS18140;old_locus_tag=YPN_3439 NC_008149.1 Protein Homology CDS 3923710 3928167 . + 0 ID=cds3525;Parent=gene3623;Dbxref=Genbank:WP_002228691.1;Name=WP_002228691.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=WP_002228691.1;transl_table=11 NC_008149.1 RefSeq gene 3928177 3929595 . + . ID=gene3624;Name=YPN_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18145;old_locus_tag=YPN_3440 NC_008149.1 Protein Homology CDS 3928177 3929595 . + 0 ID=cds3526;Parent=gene3624;Dbxref=Genbank:WP_002210138.1;Name=WP_002210138.1;gbkey=CDS;product=glutamate synthase subunit beta;protein_id=WP_002210138.1;transl_table=11 NC_008149.1 RefSeq gene 3930036 3930521 . + . ID=gene3625;Name=YPN_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18150;old_locus_tag=YPN_3441 NC_008149.1 Protein Homology CDS 3930036 3930521 . + 0 ID=cds3527;Parent=gene3625;Dbxref=Genbank:WP_002224291.1;Name=WP_002224291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224291.1;transl_table=11 NC_008149.1 RefSeq gene 3930674 3931189 . - . ID=gene3626;Name=YPN_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18155;old_locus_tag=YPN_3442 NC_008149.1 Protein Homology CDS 3930674 3931189 . - 0 ID=cds3528;Parent=gene3626;Dbxref=Genbank:WP_002216203.1;Name=WP_002216203.1;gbkey=CDS;product=peptidase;protein_id=WP_002216203.1;transl_table=11 NC_008149.1 RefSeq gene 3931195 3931836 . - . ID=gene3627;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=YPN_RS18160;old_locus_tag=YPN_3443 NC_008149.1 Protein Homology CDS 3931195 3931836 . - 0 ID=cds3529;Parent=gene3627;Dbxref=Genbank:WP_002210135.1;Name=WP_002210135.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=WP_002210135.1;transl_table=11 NC_008149.1 RefSeq gene 3932016 3932213 . + . ID=gene3628;Name=YPN_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18165 NC_008149.1 Protein Homology CDS 3932016 3932213 . + 0 ID=cds3530;Parent=gene3628;Dbxref=Genbank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11 NC_008149.1 RefSeq gene 3932210 3932602 . - . ID=gene3629;Name=YPN_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18170;old_locus_tag=YPN_3444 NC_008149.1 Protein Homology CDS 3932210 3932602 . - 0 ID=cds3531;Parent=gene3629;Dbxref=Genbank:WP_002210133.1;Name=WP_002210133.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11 NC_008149.1 RefSeq gene 3932617 3933045 . - . ID=gene3630;Name=YPN_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18175;old_locus_tag=YPN_3445 NC_008149.1 Protein Homology CDS 3932617 3933045 . - 0 ID=cds3532;Parent=gene3630;Dbxref=Genbank:WP_002210132.1;Name=WP_002210132.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11 NC_008149.1 RefSeq gene 3933359 3934486 . - . ID=gene3631;Name=YPN_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18180;old_locus_tag=YPN_3446 NC_008149.1 Protein Homology CDS 3933359 3934486 . - 0 ID=cds3533;Parent=gene3631;Dbxref=Genbank:WP_002210131.1;Name=WP_002210131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210131.1;transl_table=11 NC_008149.1 RefSeq gene 3934710 3935114 . + . ID=gene3632;Name=YPN_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18185;old_locus_tag=YPN_3447 NC_008149.1 Protein Homology CDS 3934710 3935114 . + 0 ID=cds3534;Parent=gene3632;Dbxref=Genbank:WP_002210130.1;Name=WP_002210130.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210130.1;transl_table=11 NC_008149.1 RefSeq gene 3935385 3936758 . + . ID=gene3633;Name=YPN_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18190;old_locus_tag=YPN_3448 NC_008149.1 Protein Homology CDS 3935385 3936758 . + 0 ID=cds3535;Parent=gene3633;Dbxref=Genbank:WP_002218066.1;Name=WP_002218066.1;gbkey=CDS;product=protease;protein_id=WP_002218066.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3936764 3937481 . + . ID=id324;gbkey=repeat_region NC_008149.1 RefSeq gene 3936875 3937333 . - . ID=gene3634;Name=YPN_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18195;old_locus_tag=YPN_3449 NC_008149.1 Protein Homology CDS 3936875 3937333 . - 0 ID=cds3536;Parent=gene3634;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 3937559 3938647 . + . ID=gene3635;Name=YPN_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18200;old_locus_tag=YPN_3450 NC_008149.1 Protein Homology CDS 3937559 3938647 . + 0 ID=cds3537;Parent=gene3635;Dbxref=Genbank:WP_002210128.1;Name=WP_002210128.1;gbkey=CDS;product=serine endoprotease;protein_id=WP_002210128.1;transl_table=11 NC_008149.1 RefSeq gene 3938828 3940090 . - . ID=gene3636;Name=YPN_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18205;old_locus_tag=YPN_3451 NC_008149.1 Protein Homology CDS 3938828 3940090 . - 0 ID=cds3538;Parent=gene3636;Dbxref=Genbank:WP_002210127.1;Name=WP_002210127.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11 NC_008149.1 RefSeq gene 3940244 3940498 . - . ID=gene3637;Name=YPN_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18210;old_locus_tag=YPN_3452 NC_008149.1 Protein Homology CDS 3940244 3940498 . - 0 ID=cds3539;Parent=gene3637;Dbxref=Genbank:WP_002210126.1;Name=WP_002210126.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210126.1;transl_table=11 NC_008149.1 RefSeq gene 3940645 3940947 . - . ID=gene3638;Name=YPN_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18215;old_locus_tag=YPN_3453 NC_008149.1 Protein Homology CDS 3940645 3940947 . - 0 ID=cds3540;Parent=gene3638;Dbxref=Genbank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;product=anti-sigma B factor antagonist;protein_id=WP_002210125.1;transl_table=11 NC_008149.1 RefSeq gene 3940983 3941606 . - . ID=gene3639;Name=YPN_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18220;old_locus_tag=YPN_3454 NC_008149.1 Protein Homology CDS 3940983 3941606 . - 0 ID=cds3541;Parent=gene3639;Dbxref=Genbank:WP_002210124.1;Name=WP_002210124.1;Note=involved in maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter substrate-binding protein;protein_id=WP_002210124.1;transl_table=11 NC_008149.1 RefSeq gene 3941619 3942176 . - . ID=gene3640;Name=YPN_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18225;old_locus_tag=YPN_3455 NC_008149.1 Protein Homology CDS 3941619 3942176 . - 0 ID=cds3542;Parent=gene3640;Dbxref=Genbank:WP_002210123.1;Name=WP_002210123.1;gbkey=CDS;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_002210123.1;transl_table=11 NC_008149.1 RefSeq gene 3942181 3942963 . - . ID=gene3641;Name=YPN_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18230;old_locus_tag=YPN_3456 NC_008149.1 Protein Homology CDS 3942181 3942963 . - 0 ID=cds3543;Parent=gene3641;Dbxref=Genbank:WP_002210122.1;Name=WP_002210122.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210122.1;transl_table=11 NC_008149.1 RefSeq gene 3943181 3943999 . - . ID=gene3642;Name=YPN_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18235;old_locus_tag=YPN_3457 NC_008149.1 Protein Homology CDS 3943181 3943999 . - 0 ID=cds3544;Parent=gene3642;Dbxref=Genbank:WP_002210121.1;Name=WP_002210121.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;product=organic solvent ABC transporter ATP-binding protein;protein_id=WP_002210121.1;transl_table=11 NC_008149.1 RefSeq gene 3944264 3945238 . + . ID=gene3643;Name=YPN_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18240;old_locus_tag=YPN_3458 NC_008149.1 Protein Homology CDS 3944264 3945238 . + 0 ID=cds3545;Parent=gene3643;Dbxref=Genbank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;product=sodium:calcium antiporter;protein_id=WP_002210120.1;transl_table=11 NC_008149.1 RefSeq gene 3945349 3946335 . + . ID=gene3644;Name=YPN_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18245;old_locus_tag=YPN_3459 NC_008149.1 Protein Homology CDS 3945349 3946335 . + 0 ID=cds3546;Parent=gene3644;Dbxref=Genbank:WP_002210119.1;Name=WP_002210119.1;gbkey=CDS;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11 NC_008149.1 RefSeq gene 3946584 3947147 . + . ID=gene3645;Name=YPN_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18250;old_locus_tag=YPN_3460 NC_008149.1 Protein Homology CDS 3946584 3947147 . + 0 ID=cds3547;Parent=gene3645;Dbxref=Genbank:WP_002228203.1;Name=WP_002228203.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11 NC_008149.1 RefSeq gene 3947144 3947707 . + . ID=gene3646;Name=YPN_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18255;old_locus_tag=YPN_3461 NC_008149.1 Protein Homology CDS 3947144 3947707 . + 0 ID=cds3548;Parent=gene3646;Dbxref=Genbank:WP_002218352.1;Name=WP_002218352.1;gbkey=CDS;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_002218352.1;transl_table=11 NC_008149.1 RefSeq gene 3947691 3948236 . + . ID=gene3647;Name=YPN_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18260;old_locus_tag=YPN_3462 NC_008149.1 Protein Homology CDS 3947691 3948236 . + 0 ID=cds3549;Parent=gene3647;Dbxref=Genbank:WP_002210117.1;Name=WP_002210117.1;Note=LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;gbkey=CDS;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002210117.1;transl_table=11 NC_008149.1 RefSeq gene 3948243 3948968 . + . ID=gene3648;Name=YPN_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18265;old_locus_tag=YPN_3463 NC_008149.1 Protein Homology CDS 3948243 3948968 . + 0 ID=cds3550;Parent=gene3648;Dbxref=Genbank:WP_002210116.1;Name=WP_002210116.1;gbkey=CDS;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11 NC_008149.1 RefSeq gene 3949030 3950463 . + . ID=gene3649;Name=YPN_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18270;old_locus_tag=YPN_3464 NC_008149.1 Protein Homology CDS 3949030 3950463 . + 0 ID=cds3551;Parent=gene3649;Dbxref=Genbank:WP_002210115.1;Name=WP_002210115.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;gbkey=CDS;product=RNA polymerase sigma-54 factor;protein_id=WP_002210115.1;transl_table=11 NC_008149.1 RefSeq gene 3950487 3950774 . + . ID=gene3650;Name=YPN_RS18275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS18275;pseudo=true NC_008149.1 Protein Homology CDS 3950487 3950774 . + 0 ID=cds3552;Parent=gene3650;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:3950592..3950594%2Caa:Other);transl_table=11 NC_008149.1 RefSeq gene 3950892 3951374 . + . ID=gene3651;Name=YPN_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18280;old_locus_tag=YPN_3467 NC_008149.1 Protein Homology CDS 3950892 3951374 . + 0 ID=cds3553;Parent=gene3651;Dbxref=Genbank:WP_002213952.1;Name=WP_002213952.1;Note=involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr);gbkey=CDS;product=PTS sugar transporter subunit IIA;protein_id=WP_002213952.1;transl_table=11 NC_008149.1 RefSeq gene 3951680 3952534 . + . ID=gene3652;Name=YPN_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18285;old_locus_tag=YPN_3468 NC_008149.1 Protein Homology CDS 3951680 3952534 . + 0 ID=cds3554;Parent=gene3652;Dbxref=Genbank:WP_002210113.1;Name=WP_002210113.1;Note=glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ;gbkey=CDS;product=glmZ(sRNA)-inactivating NTPase;protein_id=WP_002210113.1;transl_table=11 NC_008149.1 RefSeq gene 3952531 3952803 . + . ID=gene3653;Name=YPN_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18290;old_locus_tag=YPN_3469 NC_008149.1 Protein Homology CDS 3952531 3952803 . + 0 ID=cds3555;Parent=gene3653;Dbxref=Genbank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase;protein_id=WP_002210112.1;transl_table=11 NC_008149.1 RefSeq gene 3953141 3954076 . + . ID=gene3654;Name=YPN_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18295;old_locus_tag=YPN_3470 NC_008149.1 Protein Homology CDS 3953141 3954076 . + 0 ID=cds3556;Parent=gene3654;Dbxref=Genbank:WP_002210111.1;Name=WP_002210111.1;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=WP_002210111.1;transl_table=11 NC_008149.1 RefSeq gene 3954088 3954552 . + . ID=gene3655;Name=YPN_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18300;old_locus_tag=YPN_3471 NC_008149.1 Protein Homology CDS 3954088 3954552 . + 0 ID=cds3557;Parent=gene3655;Dbxref=Genbank:WP_002210110.1;Name=WP_002210110.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory chain;protein_id=WP_002210110.1;transl_table=11 NC_008149.1 RefSeq gene 3954690 3955076 . + . ID=gene3656;Name=YPN_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18305;old_locus_tag=YPN_3472 NC_008149.1 Protein Homology CDS 3954690 3955076 . + 0 ID=cds3558;Parent=gene3656;Dbxref=Genbank:WP_002210109.1;Name=WP_002210109.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;product=reactive intermediate/imine deaminase;protein_id=WP_002210109.1;transl_table=11 NC_008149.1 RefSeq gene 3955375 3955851 . + . ID=gene3657;Name=YPN_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18310;old_locus_tag=YPN_3473 NC_008149.1 Protein Homology CDS 3955375 3955851 . + 0 ID=cds3559;Parent=gene3657;Dbxref=Genbank:WP_002210107.1;Name=WP_002210107.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210107.1;transl_table=11 NC_008149.1 RefSeq gene 3956085 3957038 . + . ID=gene3658;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=YPN_RS18315;old_locus_tag=YPN_3474 NC_008149.1 Protein Homology CDS 3956085 3957038 . + 0 ID=cds3560;Parent=gene3658;Dbxref=Genbank:WP_002210106.1;Name=WP_002210106.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=WP_002210106.1;transl_table=11 NC_008149.1 RefSeq gene 3957449 3958864 . + . ID=gene3659;Name=YPN_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18320;old_locus_tag=YPN_3475 NC_008149.1 Protein Homology CDS 3957449 3958864 . + 0 ID=cds3561;Parent=gene3659;Dbxref=Genbank:WP_002215779.1;Name=WP_002215779.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;product=PTS maltose transporter subunit IIBC;protein_id=WP_002215779.1;transl_table=11 NC_008149.1 RefSeq gene 3958959 3960626 . + . ID=gene3660;Name=YPN_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18325;old_locus_tag=YPN_3476 NC_008149.1 Protein Homology CDS 3958959 3960626 . + 0 ID=cds3562;Parent=gene3660;Dbxref=Genbank:WP_002210104.1;Name=WP_002210104.1;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=WP_002210104.1;transl_table=11 NC_008149.1 RefSeq gene 3960979 3961389 . + . ID=gene3661;Name=YPN_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18330;old_locus_tag=YPN_3477 NC_008149.1 Protein Homology CDS 3960979 3961389 . + 0 ID=cds3563;Parent=gene3661;Dbxref=Genbank:WP_002210103.1;Name=WP_002210103.1;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11 NC_008149.1 RefSeq gene 3961629 3962015 . - . ID=gene3662;Name=YPN_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18335;old_locus_tag=YPN_3478 NC_008149.1 Protein Homology CDS 3961629 3962015 . - 0 ID=cds3564;Parent=gene3662;Dbxref=Genbank:WP_002210102.1;Name=WP_002210102.1;gbkey=CDS;product=soluble cytochrome b562 2;protein_id=WP_002210102.1;transl_table=11 NC_008149.1 RefSeq gene 3962223 3962867 . - . ID=gene3663;Name=YPN_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18340;old_locus_tag=YPN_3479 NC_008149.1 Protein Homology CDS 3962223 3962867 . - 0 ID=cds3565;Parent=gene3663;Dbxref=Genbank:WP_011055205.1;Name=WP_011055205.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011055205.1;transl_table=11 NC_008149.1 RefSeq gene 3963116 3964456 . - . ID=gene3664;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=YPN_RS18345;old_locus_tag=YPN_3480 NC_008149.1 Protein Homology CDS 3963116 3964456 . - 0 ID=cds3566;Parent=gene3664;Dbxref=Genbank:WP_002210100.1;Name=WP_002210100.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PMbA;protein_id=WP_002210100.1;transl_table=11 NC_008149.1 RefSeq gene 3964637 3965185 . + . ID=gene3665;Name=YPN_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18350;old_locus_tag=YPN_3481 NC_008149.1 Protein Homology CDS 3964637 3965185 . + 0 ID=cds3567;Parent=gene3665;Dbxref=Genbank:WP_002210099.1;Name=WP_002210099.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210099.1;transl_table=11 NC_008149.1 RefSeq gene 3965297 3965578 . - . ID=gene3666;Name=YPN_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18355;old_locus_tag=YPN_3482 NC_008149.1 Protein Homology CDS 3965297 3965578 . - 0 ID=cds3568;Parent=gene3666;Dbxref=Genbank:WP_002210098.1;Name=WP_002210098.1;gbkey=CDS;product=ribonuclease inhibitor;protein_id=WP_002210098.1;transl_table=11 NC_008149.1 RefSeq gene 3965583 3966056 . - . ID=gene3667;Name=YPN_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18360;old_locus_tag=YPN_3483 NC_008149.1 Protein Homology CDS 3965583 3966056 . - 0 ID=cds3569;Parent=gene3667;Dbxref=Genbank:WP_002214288.1;Name=WP_002214288.1;gbkey=CDS;product=ribonuclease Ba;protein_id=WP_002214288.1;transl_table=11 NC_008149.1 RefSeq gene 3966251 3966589 . - . ID=gene3668;Name=YPN_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18365;old_locus_tag=YPN_3484 NC_008149.1 Protein Homology CDS 3966251 3966589 . - 0 ID=cds3570;Parent=gene3668;Dbxref=Genbank:WP_002214289.1;Name=WP_002214289.1;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=WP_002214289.1;transl_table=11 NC_008149.1 RefSeq gene 3966586 3967719 . - . ID=gene3669;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=YPN_RS18370;old_locus_tag=YPN_3485 NC_008149.1 Protein Homology CDS 3966586 3967719 . - 0 ID=cds3571;Parent=gene3669;Dbxref=Genbank:WP_002214290.1;Name=WP_002214290.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;product=succinate-semialdehyde dehydrogenase;protein_id=WP_002214290.1;transl_table=11 NC_008149.1 RefSeq gene 3967986 3969941 . - . ID=gene3670;Name=YPN_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18375;old_locus_tag=YPN_3486 NC_008149.1 Protein Homology CDS 3967986 3969941 . - 0 ID=cds3572;Parent=gene3670;Dbxref=Genbank:WP_002210095.1;Name=WP_002210095.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002210095.1;transl_table=11 NC_008149.1 RefSeq gene 3969943 3970878 . - . ID=gene3671;Name=YPN_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18380;old_locus_tag=YPN_3487 NC_008149.1 Protein Homology CDS 3969943 3970878 . - 0 ID=cds3573;Parent=gene3671;Dbxref=Genbank:WP_002210094.1;Name=WP_002210094.1;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002210094.1;transl_table=11 NC_008149.1 RefSeq gene 3970886 3971089 . - . ID=gene3672;Name=YPN_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18385;old_locus_tag=YPN_3488 NC_008149.1 Protein Homology CDS 3970886 3971089 . - 0 ID=cds3574;Parent=gene3672;Dbxref=Genbank:WP_002210093.1;Name=WP_002210093.1;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;product=protein AaeX;protein_id=WP_002210093.1;transl_table=11 NC_008149.1 RefSeq gene 3971392 3972303 . + . ID=gene3673;Name=YPN_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18390;old_locus_tag=YPN_3489 NC_008149.1 Protein Homology CDS 3971392 3972303 . + 0 ID=cds3575;Parent=gene3673;Dbxref=Genbank:WP_002210092.1;Name=WP_002210092.1;Note=for aaeXAB operon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210092.1;transl_table=11 NC_008149.1 RefSeq gene 3972564 3973430 . + . ID=gene3674;Name=YPN_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18395;old_locus_tag=YPN_3490 NC_008149.1 Protein Homology CDS 3972564 3973430 . + 0 ID=cds3576;Parent=gene3674;Dbxref=Genbank:WP_002214297.1;Name=WP_002214297.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002214297.1;transl_table=11 NC_008149.1 RefSeq gene 3973666 3976167 . + . ID=gene3675;Name=YPN_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18400;old_locus_tag=YPN_3491 NC_008149.1 Protein Homology CDS 3973666 3976167 . + 0 ID=cds3577;Parent=gene3675;Dbxref=Genbank:WP_002210090.1;Name=WP_002210090.1;gbkey=CDS;product=toxin;protein_id=WP_002210090.1;transl_table=11 NC_008149.1 RefSeq gene 3976208 3979801 . + . ID=gene3676;Name=YPN_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18405;old_locus_tag=YPN_3492 NC_008149.1 Protein Homology CDS 3976208 3979801 . + 0 ID=cds3578;Parent=gene3676;Dbxref=Genbank:WP_002220204.1;Name=WP_002220204.1;gbkey=CDS;product=toxin;protein_id=WP_002220204.1;transl_table=11 NC_008149.1 RefSeq gene 3979858 3984348 . + . ID=gene3677;Name=YPN_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18410;old_locus_tag=YPN_3493 NC_008149.1 Protein Homology CDS 3979858 3984348 . + 0 ID=cds3579;Parent=gene3677;Dbxref=Genbank:WP_002210089.1;Name=WP_002210089.1;gbkey=CDS;product=toxin;protein_id=WP_002210089.1;transl_table=11 NC_008149.1 RefSeq gene 3984482 3984784 . + . ID=gene3678;Name=YPN_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18415;old_locus_tag=YPN_3494 NC_008149.1 Protein Homology CDS 3984482 3984784 . + 0 ID=cds3580;Parent=gene3678;Dbxref=Genbank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214300.1;transl_table=11 NC_008149.1 RefSeq gene 3984797 3985198 . + . ID=gene3679;Name=YPN_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18420;old_locus_tag=YPN_3495 NC_008149.1 Protein Homology CDS 3984797 3985198 . + 0 ID=cds3581;Parent=gene3679;Dbxref=Genbank:WP_002210087.1;Name=WP_002210087.1;gbkey=CDS;product=peptidase M15;protein_id=WP_002210087.1;transl_table=11 NC_008149.1 RefSeq gene 3985195 3985554 . + . ID=gene3680;Name=YPN_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18425;old_locus_tag=YPN_3496 NC_008149.1 Protein Homology CDS 3985195 3985554 . + 0 ID=cds3582;Parent=gene3680;Dbxref=Genbank:WP_002210086.1;Name=WP_002210086.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210086.1;transl_table=11 NC_008149.1 RefSeq gene 3985755 3988595 . + . ID=gene3681;Name=YPN_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18430;old_locus_tag=YPN_3497 NC_008149.1 Protein Homology CDS 3985755 3988595 . + 0 ID=cds3583;Parent=gene3681;Dbxref=Genbank:WP_002228695.1;Name=WP_002228695.1;gbkey=CDS;product=toxin;protein_id=WP_002228695.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3985782 3987730 . + . ID=id325;gbkey=repeat_region NC_008149.1 RefSeq gene 3988620 3991478 . + . ID=gene3682;Name=YPN_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18435;old_locus_tag=YPN_3498 NC_008149.1 Protein Homology CDS 3988620 3991478 . + 0 ID=cds3584;Parent=gene3682;Dbxref=Genbank:WP_002210083.1;Name=WP_002210083.1;gbkey=CDS;product=toxin;protein_id=WP_002210083.1;transl_table=11 NC_008149.1 RefSeq repeat_region 3988647 3990595 . + . ID=id326;gbkey=repeat_region NC_008149.1 RefSeq gene 3991681 3993126 . - . ID=gene3683;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=YPN_RS18440;old_locus_tag=YPN_3499 NC_008149.1 Protein Homology CDS 3991681 3993126 . - 0 ID=cds3585;Parent=gene3683;Dbxref=Genbank:WP_002210082.1;Name=WP_002210082.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;product=protease TldD;protein_id=WP_002210082.1;transl_table=11 NC_008149.1 RefSeq gene 3993138 3994007 . - . ID=gene3684;Name=YPN_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18445;old_locus_tag=YPN_3500 NC_008149.1 Protein Homology CDS 3993138 3994007 . - 0 ID=cds3586;Parent=gene3684;Dbxref=Genbank:WP_002210081.1;Name=WP_002210081.1;gbkey=CDS;product=amidohydrolase;protein_id=WP_002210081.1;transl_table=11 NC_008149.1 RefSeq gene 3994004 3997906 . - . ID=gene3685;Name=YPN_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18450;old_locus_tag=YPN_3501 NC_008149.1 Protein Homology CDS 3994004 3997906 . - 0 ID=cds3587;Parent=gene3685;Dbxref=Genbank:WP_013060352.1;Name=WP_013060352.1;gbkey=CDS;product=membrane protein;protein_id=WP_013060352.1;transl_table=11 NC_008149.1 RefSeq gene 3998021 3999490 . - . ID=gene3686;Name=YPN_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18455;old_locus_tag=YPN_3502 NC_008149.1 Protein Homology CDS 3998021 3999490 . - 0 ID=cds3588;Parent=gene3686;Dbxref=Genbank:WP_002210079.1;Name=WP_002210079.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11 NC_008149.1 RefSeq gene 3999480 4000073 . - . ID=gene3687;Name=YPN_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18460;old_locus_tag=YPN_3503 NC_008149.1 Protein Homology CDS 3999480 4000073 . - 0 ID=cds3589;Parent=gene3687;Dbxref=Genbank:WP_002210078.1;Name=WP_002210078.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;product=septum formation inhibitor Maf;protein_id=WP_002210078.1;transl_table=11 NC_008149.1 RefSeq gene 4000087 4000575 . - . ID=gene3688;Name=YPN_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18465;old_locus_tag=YPN_3504 NC_008149.1 Protein Homology CDS 4000087 4000575 . - 0 ID=cds3590;Parent=gene3688;Dbxref=Genbank:WP_002210077.1;Name=WP_002210077.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11 NC_008149.1 RefSeq gene 4000572 4001567 . - . ID=gene3689;Name=YPN_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18470;old_locus_tag=YPN_3505 NC_008149.1 Protein Homology CDS 4000572 4001567 . - 0 ID=cds3591;Parent=gene3689;Dbxref=Genbank:WP_002210076.1;Name=WP_002210076.1;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=WP_002210076.1;transl_table=11 NC_008149.1 RefSeq gene 4001771 4002814 . - . ID=gene3690;Name=YPN_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18475;old_locus_tag=YPN_3506 NC_008149.1 Protein Homology CDS 4001771 4002814 . - 0 ID=cds3592;Parent=gene3690;Dbxref=Genbank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11 NC_008149.1 RefSeq gene 4003151 4005067 . - . ID=gene3691;Name=YPN_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18480;old_locus_tag=YPN_3507 NC_008149.1 Protein Homology CDS 4003151 4005067 . - 0 ID=cds3593;Parent=gene3691;Dbxref=Genbank:WP_002210075.1;Name=WP_002210075.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210075.1;transl_table=11 NC_008149.1 RefSeq gene 4005468 4006445 . + . ID=gene3692;Name=YPN_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18485;old_locus_tag=YPN_3508 NC_008149.1 Protein Homology CDS 4005468 4006445 . + 0 ID=cds3594;Parent=gene3692;Dbxref=Genbank:WP_002210074.1;Name=WP_002210074.1;gbkey=CDS;product=quinone oxidoreductase;protein_id=WP_002210074.1;transl_table=11 NC_008149.1 RefSeq gene 4006668 4007768 . + . ID=gene3693;Name=YPN_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18490;old_locus_tag=YPN_3509 NC_008149.1 Protein Homology CDS 4006668 4007768 . + 0 ID=cds3595;Parent=gene3693;Dbxref=Genbank:WP_002210073.1;Name=WP_002210073.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=sulfoxide reductase catalytic subunit YedY;protein_id=WP_002210073.1;transl_table=11 NC_008149.1 RefSeq gene 4007768 4008388 . + . ID=gene3694;Name=YPN_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18495;old_locus_tag=YPN_3510 NC_008149.1 Protein Homology CDS 4007768 4008388 . + 0 ID=cds3596;Parent=gene3694;Dbxref=Genbank:WP_002210072.1;Name=WP_002210072.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_002210072.1;transl_table=11 NC_008149.1 RefSeq gene 4008651 4009103 . + . ID=gene3695;Name=YPN_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18500;old_locus_tag=YPN_3511 NC_008149.1 Protein Homology CDS 4008651 4009103 . + 0 ID=cds3597;Parent=gene3695;Dbxref=Genbank:WP_002210071.1;Name=WP_002210071.1;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11 NC_008149.1 RefSeq gene 4009261 4009725 . + . ID=gene3696;Name=YPN_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18505;old_locus_tag=YPN_3512 NC_008149.1 Protein Homology CDS 4009261 4009725 . + 0 ID=cds3598;Parent=gene3696;Dbxref=Genbank:WP_002210070.1;Name=WP_002210070.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_002210070.1;transl_table=11 NC_008149.1 RefSeq gene 4009737 4011086 . + . ID=gene3697;Name=YPN_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18510;old_locus_tag=YPN_3513 NC_008149.1 Protein Homology CDS 4009737 4011086 . + 0 ID=cds3599;Parent=gene3697;Dbxref=Genbank:WP_002210069.1;Name=WP_002210069.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002210069.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4012129 4012429 . + . ID=id327;gbkey=repeat_region NC_008149.1 RefSeq gene 4012444 4012686 . + . ID=gene3698;Name=YPN_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18515;old_locus_tag=YPN_3514 NC_008149.1 Protein Homology CDS 4012444 4012686 . + 0 ID=cds3600;Parent=gene3698;Dbxref=Genbank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;product=membrane protein;protein_id=WP_002210066.1;transl_table=11 NC_008149.1 RefSeq gene 4012676 4014130 . + . ID=gene3699;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=YPN_RS18520;old_locus_tag=YPN_3515 NC_008149.1 Protein Homology CDS 4012676 4014130 . + 0 ID=cds3601;Parent=gene3699;Dbxref=Genbank:WP_002210065.1;Name=WP_002210065.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium:pantothenate symporter;protein_id=WP_002210065.1;transl_table=11 NC_008149.1 RefSeq gene 4014206 4015087 . + . ID=gene3700;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=YPN_RS18525;old_locus_tag=YPN_3516 NC_008149.1 Protein Homology CDS 4014206 4015087 . + 0 ID=cds3602;Parent=gene3700;Dbxref=Genbank:WP_002220963.1;Name=WP_002220963.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=WP_002220963.1;transl_table=11 NC_008149.1 RefSeq gene 4015676 4016641 . + . ID=gene3701;Name=YPN_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18530;old_locus_tag=YPN_3517 NC_008149.1 Protein Homology CDS 4015676 4016641 . + 0 ID=cds3603;Parent=gene3701;Dbxref=Genbank:WP_002210062.1;Name=WP_002210062.1;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=WP_002210062.1;transl_table=11 NC_008149.1 RefSeq gene 4016666 4016962 . + . ID=gene3702;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=YPN_RS18535;old_locus_tag=YPN_3518 NC_008149.1 Protein Homology CDS 4016666 4016962 . + 0 ID=cds3604;Parent=gene3702;Dbxref=Genbank:WP_002210061.1;Name=WP_002210061.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=WP_002210061.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4017074 4017556 . + . ID=id328;gbkey=repeat_region NC_008149.1 RefSeq gene 4017716 4018192 . - . ID=gene3703;Name=YPN_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18540;old_locus_tag=YPN_3519 NC_008149.1 Protein Homology CDS 4017716 4018192 . - 0 ID=cds3605;Parent=gene3703;Dbxref=Genbank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210060.1;transl_table=11 NC_008149.1 RefSeq gene 4018258 4018920 . - . ID=gene3704;Name=YPN_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18545;old_locus_tag=YPN_3520 NC_008149.1 Protein Homology CDS 4018258 4018920 . - 0 ID=cds3606;Parent=gene3704;Dbxref=Genbank:WP_002210059.1;Name=WP_002210059.1;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=WP_002210059.1;transl_table=11 NC_008149.1 RefSeq gene 4019010 4020374 . - . ID=gene3705;Name=YPN_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18550;old_locus_tag=YPN_3521 NC_008149.1 Protein Homology CDS 4019010 4020374 . - 0 ID=cds3607;Parent=gene3705;Dbxref=Genbank:WP_002210058.1;Name=WP_002210058.1;gbkey=CDS;product=MFS transporter;protein_id=WP_002210058.1;transl_table=11 NC_008149.1 RefSeq gene 4020528 4020923 . - . ID=gene3706;Name=YPN_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18555;old_locus_tag=YPN_3522 NC_008149.1 Protein Homology CDS 4020528 4020923 . - 0 ID=cds3608;Parent=gene3706;Dbxref=Genbank:WP_002217470.1;Name=WP_002217470.1;gbkey=CDS;product=gamma carboxymuconolactone decarboxylase;protein_id=WP_002217470.1;transl_table=11 NC_008149.1 RefSeq gene 4021101 4021991 . - . ID=gene3707;Name=YPN_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18560;old_locus_tag=YPN_3523 NC_008149.1 Protein Homology CDS 4021101 4021991 . - 0 ID=cds3609;Parent=gene3707;Dbxref=Genbank:WP_002210056.1;Name=WP_002210056.1;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_002210056.1;transl_table=11 NC_008149.1 RefSeq gene 4022056 4022868 . - . ID=gene3708;Name=YPN_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18565;old_locus_tag=YPN_3524 NC_008149.1 Protein Homology CDS 4022056 4022868 . - 0 ID=cds3610;Parent=gene3708;Dbxref=Genbank:WP_002210055.1;Name=WP_002210055.1;gbkey=CDS;product=MBL fold hydrolase;protein_id=WP_002210055.1;transl_table=11 NC_008149.1 RefSeq gene 4023344 4023811 . + . ID=gene3709;Name=YPN_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18570;old_locus_tag=YPN_3525 NC_008149.1 Protein Homology CDS 4023344 4023811 . + 0 ID=cds3611;Parent=gene3709;Dbxref=Genbank:WP_002210054.1;Name=WP_002210054.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210054.1;transl_table=11 NC_008149.1 RefSeq gene 4024102 4024251 . + . ID=gene3710;Name=YPN_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18575 NC_008149.1 Protein Homology CDS 4024102 4024251 . + 0 ID=cds3612;Parent=gene3710;Dbxref=Genbank:WP_002374696.1;Name=WP_002374696.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002374696.1;transl_table=11 NC_008149.1 cmsearch region 4024165 4024607 . + . ID=id329;Note=cspA;gbkey=misc_feature NC_008149.1 RefSeq repeat_region 4024326 4024528 . + . ID=id330;gbkey=repeat_region NC_008149.1 RefSeq gene 4024344 4024556 . + . ID=gene3711;Name=YPN_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18580;old_locus_tag=YPN_3526 NC_008149.1 Protein Homology CDS 4024344 4024556 . + 0 ID=cds3613;Parent=gene3711;Dbxref=Genbank:WP_002210053.1;Name=WP_002210053.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210053.1;transl_table=11 NC_008149.1 cmsearch region 4024642 4025055 . + . ID=id331;Note=cspA;gbkey=misc_feature NC_008149.1 RefSeq repeat_region 4024798 4025000 . + . ID=id332;gbkey=repeat_region NC_008149.1 RefSeq gene 4024816 4025028 . + . ID=gene3712;Name=YPN_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18585;old_locus_tag=YPN_3527 NC_008149.1 Protein Homology CDS 4024816 4025028 . + 0 ID=cds3614;Parent=gene3712;Dbxref=Genbank:WP_002210052.1;Name=WP_002210052.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_002210052.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4025101 4025818 . + . ID=id333;gbkey=repeat_region NC_008149.1 RefSeq gene 4025211 4025669 . - . ID=gene3713;Name=YPN_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18590;old_locus_tag=YPN_3528 NC_008149.1 Protein Homology CDS 4025211 4025669 . - 0 ID=cds3615;Parent=gene3713;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 4025659 4025835 . - . ID=gene3714;Name=YPN_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18595 NC_008149.1 Protein Homology CDS 4025659 4025835 . - 0 ID=cds3616;Parent=gene3714;Dbxref=Genbank:WP_025470774.1;Name=WP_025470774.1;gbkey=CDS;product=transposase;protein_id=WP_025470774.1;transl_table=11 NC_008149.1 RefSeq gene 4026074 4027249 . + . ID=gene3715;Name=YPN_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18600;old_locus_tag=YPN_3529 NC_008149.1 Protein Homology CDS 4026074 4027249 . + 0 ID=cds3617;Parent=gene3715;Dbxref=Genbank:WP_002210051.1;Name=WP_002210051.1;gbkey=CDS;product=DNA repair ATPase;protein_id=WP_002210051.1;transl_table=11 NC_008149.1 RefSeq gene 4027356 4028702 . - . ID=gene3716;Name=YPN_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18605;old_locus_tag=YPN_3530 NC_008149.1 Protein Homology CDS 4027356 4028702 . - 0 ID=cds3618;Parent=gene3716;Dbxref=Genbank:WP_002210050.1;Name=WP_002210050.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210050.1;transl_table=11 NC_008149.1 RefSeq gene 4028956 4029807 . + . ID=gene3717;Name=YPN_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18610;old_locus_tag=YPN_3531 NC_008149.1 Protein Homology CDS 4028956 4029807 . + 0 ID=cds3619;Parent=gene3717;Dbxref=Genbank:WP_002228699.1;Name=WP_002228699.1;Note=YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli;gbkey=CDS;product=S-transferase;protein_id=WP_002228699.1;transl_table=11 NC_008149.1 RefSeq gene 4029997 4030602 . - . ID=gene3718;Name=YPN_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18615;old_locus_tag=YPN_3532 NC_008149.1 Protein Homology CDS 4029997 4030602 . - 0 ID=cds3620;Parent=gene3718;Dbxref=Genbank:WP_002210048.1;Name=WP_002210048.1;gbkey=CDS;product=phosphosugar isomerase;protein_id=WP_002210048.1;transl_table=11 NC_008149.1 RefSeq gene 4030599 4032236 . - . ID=gene3719;Name=YPN_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18620;old_locus_tag=YPN_3533 NC_008149.1 Protein Homology CDS 4030599 4032236 . - 0 ID=cds3621;Parent=gene3719;Dbxref=Genbank:WP_002210047.1;Name=WP_002210047.1;gbkey=CDS;product=ribulokinase;protein_id=WP_002210047.1;transl_table=11 NC_008149.1 RefSeq gene 4032255 4033208 . - . ID=gene3720;Name=YPN_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18625;old_locus_tag=YPN_3534 NC_008149.1 Protein Homology CDS 4032255 4033208 . - 0 ID=cds3622;Parent=gene3720;Dbxref=Genbank:WP_002210046.1;Name=WP_002210046.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002210046.1;transl_table=11 NC_008149.1 RefSeq gene 4033210 4034199 . - . ID=gene3721;Name=YPN_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18630;old_locus_tag=YPN_3535 NC_008149.1 Protein Homology CDS 4033210 4034199 . - 0 ID=cds3623;Parent=gene3721;Dbxref=Genbank:WP_002210045.1;Name=WP_002210045.1;gbkey=CDS;product=sugar ABC transporter permease;protein_id=WP_002210045.1;transl_table=11 NC_008149.1 RefSeq gene 4034192 4035688 . - . ID=gene3722;Name=YPN_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18635;old_locus_tag=YPN_3536 NC_008149.1 Protein Homology CDS 4034192 4035688 . - 0 ID=cds3624;Parent=gene3722;Dbxref=Genbank:WP_002210044.1;Name=WP_002210044.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=WP_002210044.1;transl_table=11 NC_008149.1 RefSeq gene 4035892 4036881 . - . ID=gene3723;Name=YPN_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18640;old_locus_tag=YPN_3537 NC_008149.1 Protein Homology CDS 4035892 4036881 . - 0 ID=cds3625;Parent=gene3723;Dbxref=Genbank:WP_002210043.1;Name=WP_002210043.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002210043.1;transl_table=11 NC_008149.1 RefSeq gene 4037675 4038595 . + . ID=gene3724;Name=YPN_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18645;old_locus_tag=YPN_3538 NC_008149.1 Protein Homology CDS 4037675 4038595 . + 0 ID=cds3626;Parent=gene3724;Dbxref=Genbank:WP_002210042.1;Name=WP_002210042.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=WP_002210042.1;transl_table=11 NC_008149.1 RefSeq gene 4038747 4039934 . + . ID=gene3725;Name=YPN_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18650;old_locus_tag=YPN_3539 NC_008149.1 Protein Homology CDS 4038747 4039934 . + 0 ID=cds3627;Parent=gene3725;Dbxref=Genbank:WP_002210041.1;Name=WP_002210041.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210041.1;transl_table=11 NC_008149.1 RefSeq gene 4040152 4041801 . - . ID=gene3726;Name=YPN_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18655;old_locus_tag=YPN_3540 NC_008149.1 Protein Homology CDS 4040152 4041801 . - 0 ID=cds3628;Parent=gene3726;Dbxref=Genbank:WP_002215816.1;Name=WP_002215816.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_002215816.1;transl_table=11 NC_008149.1 RefSeq gene 4042150 4043505 . - . ID=gene3727;Name=YPN_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18660;old_locus_tag=YPN_3541 NC_008149.1 Protein Homology CDS 4042150 4043505 . - 0 ID=cds3629;Parent=gene3727;Dbxref=Genbank:WP_002210039.1;Name=WP_002210039.1;gbkey=CDS;product=xanthine/uracil permease;protein_id=WP_002210039.1;transl_table=11 NC_008149.1 RefSeq gene 4043959 4044162 . + . ID=gene3728;Name=YPN_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18665;old_locus_tag=YPN_3542 NC_008149.1 Protein Homology CDS 4043959 4044162 . + 0 ID=cds3630;Parent=gene3728;Dbxref=Genbank:WP_002210038.1;Name=WP_002210038.1;gbkey=CDS;product=DNA-damage-inducible protein J;protein_id=WP_002210038.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4044240 4044407 . + . ID=id334;gbkey=repeat_region NC_008149.1 RefSeq gene 4044781 4045596 . - . ID=gene3729;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=YPN_RS18670;old_locus_tag=YPN_3543 NC_008149.1 Protein Homology CDS 4044781 4045596 . - 0 ID=cds3631;Parent=gene3729;Dbxref=Genbank:WP_002210036.1;Name=WP_002210036.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuB;product=aliphatic sulfonate ABC transporter ATP-binding protein;protein_id=WP_002210036.1;transl_table=11 NC_008149.1 RefSeq gene 4045593 4046387 . - . ID=gene3730;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=YPN_RS18675;old_locus_tag=YPN_3544 NC_008149.1 Protein Homology CDS 4045593 4046387 . - 0 ID=cds3632;Parent=gene3730;Dbxref=Genbank:WP_002213853.1;Name=WP_002213853.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=sulfonate ABC transporter;protein_id=WP_002213853.1;transl_table=11 NC_008149.1 RefSeq gene 4046399 4047547 . - . ID=gene3731;Name=YPN_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18680;old_locus_tag=YPN_3545 NC_008149.1 Protein Homology CDS 4046399 4047547 . - 0 ID=cds3633;Parent=gene3731;Dbxref=Genbank:WP_002210034.1;Name=WP_002210034.1;Note=catalyzes the release of sulfite from alkanesulfonates;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=WP_002210034.1;transl_table=11 NC_008149.1 RefSeq gene 4047566 4048702 . - . ID=gene3732;Name=YPN_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18685;old_locus_tag=YPN_3546 NC_008149.1 Protein Homology CDS 4047566 4048702 . - 0 ID=cds3634;Parent=gene3732;Dbxref=Genbank:WP_002220949.1;Name=WP_002220949.1;gbkey=CDS;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_002220949.1;transl_table=11 NC_008149.1 RefSeq gene 4048717 4049298 . - . ID=gene3733;Name=YPN_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18690;old_locus_tag=YPN_3547 NC_008149.1 Protein Homology CDS 4048717 4049298 . - 0 ID=cds3635;Parent=gene3733;Dbxref=Genbank:WP_002210032.1;Name=WP_002210032.1;gbkey=CDS;product=FMN reductase;protein_id=WP_002210032.1;transl_table=11 NC_008149.1 RefSeq gene 4049769 4050470 . + . ID=gene3734;Name=YPN_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18695;old_locus_tag=YPN_3548 NC_008149.1 Protein Homology CDS 4049769 4050470 . + 0 ID=cds3636;Parent=gene3734;Dbxref=Genbank:WP_002210030.1;Name=WP_002210030.1;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=WP_002210030.1;transl_table=11 NC_008149.1 RefSeq gene 4050627 4051556 . + . ID=gene3735;Name=YPN_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18700;old_locus_tag=YPN_3549 NC_008149.1 Protein Homology CDS 4050627 4051556 . + 0 ID=cds3637;Parent=gene3735;Dbxref=Genbank:WP_002210028.1;Name=WP_002210028.1;gbkey=CDS;product=carbohydrate kinase;protein_id=WP_002210028.1;transl_table=11 NC_008149.1 RefSeq gene 4051562 4052065 . + . ID=gene3736;Name=YPN_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18705;old_locus_tag=YPN_3550 NC_008149.1 Protein Homology CDS 4051562 4052065 . + 0 ID=cds3638;Parent=gene3736;Dbxref=Genbank:WP_002210027.1;Name=WP_002210027.1;gbkey=CDS;product=carbohydrate transporter;protein_id=WP_002210027.1;transl_table=11 NC_008149.1 RefSeq gene 4052227 4053093 . - . ID=gene3737;Name=YPN_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18710;old_locus_tag=YPN_3551 NC_008149.1 Protein Homology CDS 4052227 4053093 . - 0 ID=cds3639;Parent=gene3737;Dbxref=Genbank:WP_002210026.1;Name=WP_002210026.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002210026.1;transl_table=11 NC_008149.1 RefSeq gene 4053363 4054493 . + . ID=gene3738;Name=YPN_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18715;old_locus_tag=YPN_3552 NC_008149.1 Protein Homology CDS 4053363 4054493 . + 0 ID=cds3640;Parent=gene3738;Dbxref=Genbank:WP_002210025.1;Name=WP_002210025.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_002210025.1;transl_table=11 NC_008149.1 RefSeq gene 4054490 4055389 . + . ID=gene3739;Name=YPN_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18720;old_locus_tag=YPN_3553 NC_008149.1 Protein Homology CDS 4054490 4055389 . + 0 ID=cds3641;Parent=gene3739;Dbxref=Genbank:WP_002210024.1;Name=WP_002210024.1;gbkey=CDS;product=xylose isomerase;protein_id=WP_002210024.1;transl_table=11 NC_008149.1 RefSeq gene 4055736 4056530 . - . ID=gene3740;Name=YPN_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18725;old_locus_tag=YPN_3554 NC_008149.1 Protein Homology CDS 4055736 4056530 . - 0 ID=cds3642;Parent=gene3740;Dbxref=Genbank:WP_002210023.1;Name=WP_002210023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210023.1;transl_table=11 NC_008149.1 RefSeq gene 4056539 4061077 . - . ID=gene3741;Name=YPN_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18730;old_locus_tag=YPN_3555 NC_008149.1 Protein Homology CDS 4056539 4061077 . - 0 ID=cds3643;Parent=gene3741;Dbxref=Genbank:WP_002210022.1;Name=WP_002210022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210022.1;transl_table=11 NC_008149.1 RefSeq gene 4061122 4061544 . - . ID=gene3742;Name=YPN_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18735;old_locus_tag=YPN_3556 NC_008149.1 Protein Homology CDS 4061122 4061544 . - 0 ID=cds3644;Parent=gene3742;Dbxref=Genbank:WP_002213861.1;Name=WP_002213861.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213861.1;transl_table=11 NC_008149.1 RefSeq gene 4061547 4063745 . - . ID=gene3743;Name=YPN_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18740;old_locus_tag=YPN_3557 NC_008149.1 Protein Homology CDS 4061547 4063745 . - 0 ID=cds3645;Parent=gene3743;Dbxref=Genbank:WP_002210020.1;Name=WP_002210020.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002210020.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4061927 4063999 . + . ID=id335;gbkey=repeat_region NC_008149.1 RefSeq gene 4064106 4064513 . + . ID=gene3744;Name=YPN_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18750;old_locus_tag=YPN_3559 NC_008149.1 Protein Homology CDS 4064106 4064513 . + 0 ID=cds3646;Parent=gene3744;Dbxref=Genbank:WP_002210018.1;Name=WP_002210018.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002210018.1;transl_table=11 NC_008149.1 RefSeq gene 4064595 4064819 . + . ID=gene3745;Name=YPN_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18755;old_locus_tag=YPN_3560 NC_008149.1 Protein Homology CDS 4064595 4064819 . + 0 ID=cds3647;Parent=gene3745;Dbxref=Genbank:WP_002213866.1;Name=WP_002213866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213866.1;transl_table=11 NC_008149.1 RefSeq gene 4064943 4065086 . + . ID=gene3746;Name=YPN_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18760;old_locus_tag=YPN_3561 NC_008149.1 Protein Homology CDS 4064943 4065086 . + 0 ID=cds3648;Parent=gene3746;Dbxref=Genbank:WP_002210017.1;Name=WP_002210017.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002210017.1;transl_table=11 NC_008149.1 RefSeq gene 4065136 4065621 . - . ID=gene3747;Name=YPN_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18765;old_locus_tag=YPN_3562 NC_008149.1 Protein Homology CDS 4065136 4065621 . - 0 ID=cds3649;Parent=gene3747;Dbxref=Genbank:WP_002213869.1;Name=WP_002213869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213869.1;transl_table=11 NC_008149.1 RefSeq gene 4065623 4066993 . - . ID=gene3748;Name=YPN_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18770;old_locus_tag=YPN_3563 NC_008149.1 Protein Homology CDS 4065623 4066993 . - 0 ID=cds3650;Parent=gene3748;Dbxref=Genbank:WP_002213871.1;Name=WP_002213871.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002213871.1;transl_table=11 NC_008149.1 RefSeq gene 4067021 4069885 . - . ID=gene3749;Name=YPN_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18775;old_locus_tag=YPN_3564 NC_008149.1 Protein Homology CDS 4067021 4069885 . - 0 ID=cds3651;Parent=gene3749;Dbxref=Genbank:WP_002213873.1;Name=WP_002213873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213873.1;transl_table=11 NC_008149.1 RefSeq gene 4069878 4070336 . - . ID=gene3750;Name=YPN_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18780;old_locus_tag=YPN_3565 NC_008149.1 Protein Homology CDS 4069878 4070336 . - 0 ID=cds3652;Parent=gene3750;Dbxref=Genbank:WP_002213383.1;Name=WP_002213383.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213383.1;transl_table=11 NC_008149.1 RefSeq gene 4070342 4072744 . - . ID=gene3751;Name=YPN_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18785;old_locus_tag=YPN_3566 NC_008149.1 Protein Homology CDS 4070342 4072744 . - 0 ID=cds3653;Parent=gene3751;Dbxref=Genbank:WP_002213876.1;Name=WP_002213876.1;gbkey=CDS;product=type VI secretion protein Vgr;protein_id=WP_002213876.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4070746 4072477 . + . ID=id336;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 4072501 4072998 . + . ID=id337;gbkey=repeat_region NC_008149.1 RefSeq gene 4072766 4073299 . - . ID=gene3752;Name=YPN_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18790;old_locus_tag=YPN_3567 NC_008149.1 Protein Homology CDS 4072766 4073299 . - 0 ID=cds3654;Parent=gene3752;Dbxref=Genbank:WP_002213878.1;Name=WP_002213878.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213878.1;transl_table=11 NC_008149.1 RefSeq gene 4073296 4074078 . - . ID=gene3753;Name=YPN_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18795;old_locus_tag=YPN_3568 NC_008149.1 Protein Homology CDS 4073296 4074078 . - 0 ID=cds3655;Parent=gene3753;Dbxref=Genbank:WP_002213880.1;Name=WP_002213880.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213880.1;transl_table=11 NC_008149.1 RefSeq gene 4074203 4077736 . - . ID=gene3754;Name=YPN_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18800;old_locus_tag=YPN_3569 NC_008149.1 Protein Homology CDS 4074203 4077736 . - 0 ID=cds3656;Parent=gene3754;Dbxref=Genbank:WP_002212111.1;Name=WP_002212111.1;gbkey=CDS;product=type VI secretion protein IcmF;protein_id=WP_002212111.1;transl_table=11 NC_008149.1 RefSeq gene 4077768 4079156 . - . ID=gene3755;Name=YPN_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18805;old_locus_tag=YPN_3570 NC_008149.1 Protein Homology CDS 4077768 4079156 . - 0 ID=cds3657;Parent=gene3755;Dbxref=Genbank:WP_002212110.1;Name=WP_002212110.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212110.1;transl_table=11 NC_008149.1 RefSeq gene 4079162 4079848 . - . ID=gene3756;Name=YPN_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18810;old_locus_tag=YPN_3571 NC_008149.1 Protein Homology CDS 4079162 4079848 . - 0 ID=cds3658;Parent=gene3756;Dbxref=Genbank:WP_002212109.1;Name=WP_002212109.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002212109.1;transl_table=11 NC_008149.1 RefSeq gene 4079845 4080642 . - . ID=gene3757;Name=YPN_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18815;old_locus_tag=YPN_3572 NC_008149.1 Protein Homology CDS 4079845 4080642 . - 0 ID=cds3659;Parent=gene3757;Dbxref=Genbank:WP_002212108.1;Name=WP_002212108.1;gbkey=CDS;product=Fis family transcriptional regulator;protein_id=WP_002212108.1;transl_table=11 NC_008149.1 RefSeq gene 4080639 4083242 . - . ID=gene3758;Name=YPN_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18820;old_locus_tag=YPN_3573 NC_008149.1 Protein Homology CDS 4080639 4083242 . - 0 ID=cds3660;Parent=gene3758;Dbxref=Genbank:WP_002212107.1;Name=WP_002212107.1;gbkey=CDS;product=ATP-dependent Clp protease ClpV;protein_id=WP_002212107.1;transl_table=11 NC_008149.1 RefSeq gene 4083253 4084005 . - . ID=gene3759;Name=YPN_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18825;old_locus_tag=YPN_3574 NC_008149.1 Protein Homology CDS 4083253 4084005 . - 0 ID=cds3661;Parent=gene3759;Dbxref=Genbank:WP_002355154.1;Name=WP_002355154.1;gbkey=CDS;product=chemotaxis protein MotB;protein_id=WP_002355154.1;transl_table=11 NC_008149.1 RefSeq gene 4084020 4085366 . - . ID=gene3760;Name=YPN_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18830;old_locus_tag=YPN_3575 NC_008149.1 Protein Homology CDS 4084020 4085366 . - 0 ID=cds3662;Parent=gene3760;Dbxref=Genbank:WP_002212105.1;Name=WP_002212105.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212105.1;transl_table=11 NC_008149.1 RefSeq gene 4085369 4085914 . - . ID=gene3761;Name=YPN_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18835;old_locus_tag=YPN_3576 NC_008149.1 Protein Homology CDS 4085369 4085914 . - 0 ID=cds3663;Parent=gene3761;Dbxref=Genbank:WP_002212104.1;Name=WP_002212104.1;gbkey=CDS;product=lipoprotein;protein_id=WP_002212104.1;transl_table=11 NC_008149.1 RefSeq gene 4085914 4087230 . - . ID=gene3762;Name=YPN_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18840;old_locus_tag=YPN_3577 NC_008149.1 Protein Homology CDS 4085914 4087230 . - 0 ID=cds3664;Parent=gene3762;Dbxref=Genbank:WP_002212103.1;Name=WP_002212103.1;gbkey=CDS;product=phosphopeptide-binding protein;protein_id=WP_002212103.1;transl_table=11 NC_008149.1 RefSeq gene 4087356 4088444 . - . ID=gene3763;Name=YPN_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18845;old_locus_tag=YPN_3578 NC_008149.1 Protein Homology CDS 4087356 4088444 . - 0 ID=cds3665;Parent=gene3763;Dbxref=Genbank:WP_002213885.1;Name=WP_002213885.1;gbkey=CDS;product=type VI secretion protein;protein_id=WP_002213885.1;transl_table=11 NC_008149.1 RefSeq gene 4088408 4089151 . - . ID=gene3764;Name=YPN_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18850;old_locus_tag=YPN_3579 NC_008149.1 Protein Homology CDS 4088408 4089151 . - 0 ID=cds3666;Parent=gene3764;Dbxref=Genbank:WP_002228704.1;Name=WP_002228704.1;gbkey=CDS;product=type VI secretion protein ImpG;protein_id=WP_002228704.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4089146 4090803 . + . ID=id338;gbkey=repeat_region NC_008149.1 RefSeq gene 4089202 4089717 . + . ID=gene3765;Name=YPN_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18855;old_locus_tag=YPN_3580 NC_008149.1 Protein Homology CDS 4089202 4089717 . + 0 ID=cds3667;Parent=gene3765;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_008149.1 RefSeq gene 4089771 4090556 . + . ID=gene3766;Name=YPN_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18860;old_locus_tag=YPN_3581 NC_008149.1 Protein Homology CDS 4089771 4090556 . + 0 ID=cds3668;Parent=gene3766;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_008149.1 RefSeq gene 4090911 4091180 . - . ID=gene3767;Name=YPN_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18865 NC_008149.1 Protein Homology CDS 4090911 4091180 . - 0 ID=cds3669;Parent=gene3767;Dbxref=Genbank:WP_002209494.1;Name=WP_002209494.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209494.1;transl_table=11 NC_008149.1 RefSeq gene 4091345 4091809 . - . ID=gene3768;Name=YPN_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18870;old_locus_tag=YPN_3583 NC_008149.1 Protein Homology CDS 4091345 4091809 . - 0 ID=cds3670;Parent=gene3768;Dbxref=Genbank:WP_002209495.1;Name=WP_002209495.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209495.1;transl_table=11 NC_008149.1 RefSeq gene 4092118 4092492 . - . ID=gene3769;Name=YPN_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18875;old_locus_tag=YPN_3584 NC_008149.1 Protein Homology CDS 4092118 4092492 . - 0 ID=cds3671;Parent=gene3769;Dbxref=Genbank:WP_002217865.1;Name=WP_002217865.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217865.1;transl_table=11 NC_008149.1 RefSeq gene 4092891 4094405 . + . ID=gene3770;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=YPN_RS18880;old_locus_tag=YPN_3585 NC_008149.1 Protein Homology CDS 4092891 4094405 . + 0 ID=cds3672;Parent=gene3770;Dbxref=Genbank:WP_002220236.1;Name=WP_002220236.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002220236.1;transl_table=11 NC_008149.1 RefSeq gene 4094568 4097015 . - . ID=gene3771;Name=YPN_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18885;old_locus_tag=YPN_3586 NC_008149.1 Protein Homology CDS 4094568 4097015 . - 0 ID=cds3673;Parent=gene3771;Dbxref=Genbank:WP_002209497.1;Name=WP_002209497.1;gbkey=CDS;product=glycogen phosphorylase;protein_id=WP_002209497.1;transl_table=11 NC_008149.1 RefSeq gene 4097184 4098614 . - . ID=gene3772;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=YPN_RS18890;old_locus_tag=YPN_3587 NC_008149.1 Protein Homology CDS 4097184 4098614 . - 0 ID=cds3674;Parent=gene3772;Dbxref=Genbank:WP_002209498.1;Name=WP_002209498.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=WP_002209498.1;transl_table=11 NC_008149.1 RefSeq gene 4098682 4100112 . - . ID=gene3773;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=YPN_RS18895;old_locus_tag=YPN_3588 NC_008149.1 Protein Homology CDS 4098682 4100112 . - 0 ID=cds3675;Parent=gene3773;Dbxref=Genbank:WP_002214589.1;Name=WP_002214589.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_002214589.1;transl_table=11 NC_008149.1 RefSeq gene 4100122 4102110 . - . ID=gene3774;Name=YPN_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18900;old_locus_tag=YPN_3589 NC_008149.1 Protein Homology CDS 4100122 4102110 . - 0 ID=cds3676;Parent=gene3774;Dbxref=Genbank:WP_002209499.1;Name=WP_002209499.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;product=glycogen debranching protein;protein_id=WP_002209499.1;transl_table=11 NC_008149.1 RefSeq gene 4102112 4104295 . - . ID=gene3775;Name=YPN_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18905;old_locus_tag=YPN_3590 NC_008149.1 Protein Homology CDS 4102112 4104295 . - 0 ID=cds3677;Parent=gene3775;Dbxref=Genbank:WP_002209500.1;Name=WP_002209500.1;gbkey=CDS;product=1%2C4-alpha-glucan-branching protein;protein_id=WP_002209500.1;transl_table=11 NC_008149.1 RefSeq gene 4104801 4106498 . + . ID=gene3776;Name=YPN_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18910;old_locus_tag=YPN_3591 NC_008149.1 Protein Homology CDS 4104801 4106498 . + 0 ID=cds3678;Parent=gene3776;Dbxref=Genbank:WP_002209502.1;Name=WP_002209502.1;gbkey=CDS;product=sensor histidine kinase;protein_id=WP_002209502.1;transl_table=11 NC_008149.1 RefSeq gene 4106706 4119278 . - . ID=gene3777;Name=YPN_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18915;old_locus_tag=YPN_3592 NC_008149.1 Protein Homology CDS 4106706 4119278 . - 0 ID=cds3679;Parent=gene3777;Dbxref=Genbank:WP_025471020.1;Name=WP_025471020.1;gbkey=CDS;product=invasin;protein_id=WP_025471020.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4111207 4111418 . + . ID=id339;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 4112005 4113007 . + . ID=id340;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 4113197 4113298 . + . ID=id341;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 4113485 4113586 . + . ID=id342;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 4114064 4114235 . + . ID=id343;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 4114643 4114744 . + . ID=id344;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 4114903 4115105 . + . ID=id345;gbkey=repeat_region NC_008149.1 RefSeq repeat_region 4115776 4116635 . + . ID=id346;gbkey=repeat_region NC_008149.1 RefSeq gene 4120822 4121163 . + . ID=gene3778;Name=YPN_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18920;old_locus_tag=YPN_3593 NC_008149.1 Protein Homology CDS 4120822 4121163 . + 0 ID=cds3680;Parent=gene3778;Dbxref=Genbank:WP_011171941.1;Name=WP_011171941.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011171941.1;transl_table=11 NC_008149.1 RefSeq gene 4121254 4121541 . - . ID=gene3779;Name=YPN_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18925;old_locus_tag=YPN_3594 NC_008149.1 Protein Homology CDS 4121254 4121541 . - 0 ID=cds3681;Parent=gene3779;Dbxref=Genbank:WP_002209504.1;Name=WP_002209504.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209504.1;transl_table=11 NC_008149.1 RefSeq gene 4121548 4121847 . - . ID=gene3780;Name=YPN_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18930;old_locus_tag=YPN_3595 NC_008149.1 Protein Homology CDS 4121548 4121847 . - 0 ID=cds3682;Parent=gene3780;Dbxref=Genbank:WP_002209505.1;Name=WP_002209505.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209505.1;transl_table=11 NC_008149.1 RefSeq gene 4122163 4122444 . - . ID=gene3781;Name=YPN_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18935;old_locus_tag=YPN_3596 NC_008149.1 Protein Homology CDS 4122163 4122444 . - 0 ID=cds3683;Parent=gene3781;Dbxref=Genbank:WP_002214584.1;Name=WP_002214584.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214584.1;transl_table=11 NC_008149.1 RefSeq gene 4122613 4123716 . - . ID=gene3782;Name=YPN_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18940;old_locus_tag=YPN_3597 NC_008149.1 Protein Homology CDS 4122613 4123716 . - 0 ID=cds3684;Parent=gene3782;Dbxref=Genbank:WP_002209507.1;Name=WP_002209507.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209507.1;transl_table=11 NC_008149.1 RefSeq gene 4124074 4124667 . + . ID=gene3783;Name=YPN_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18945;old_locus_tag=YPN_3598 NC_008149.1 Protein Homology CDS 4124074 4124667 . + 0 ID=cds3685;Parent=gene3783;Dbxref=Genbank:WP_002209508.1;Name=WP_002209508.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209508.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4124758 4124860 . + . ID=id347;gbkey=repeat_region NC_008149.1 RefSeq gene 4124907 4125296 . - . ID=gene3784;Name=YPN_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18950;old_locus_tag=YPN_3599 NC_008149.1 Protein Homology CDS 4124907 4125296 . - 0 ID=cds3686;Parent=gene3784;Dbxref=Genbank:WP_002209509.1;Name=WP_002209509.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209509.1;transl_table=11 NC_008149.1 RefSeq gene 4125351 4125491 . - . ID=gene3785;Name=YPN_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18955 NC_008149.1 Protein Homology CDS 4125351 4125491 . - 0 ID=cds3687;Parent=gene3785;Dbxref=Genbank:WP_002209510.1;Name=WP_002209510.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209510.1;transl_table=11 NC_008149.1 RefSeq gene 4125682 4125915 . - . ID=gene3786;Name=YPN_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18960;old_locus_tag=YPN_3601 NC_008149.1 Protein Homology CDS 4125682 4125915 . - 0 ID=cds3688;Parent=gene3786;Dbxref=Genbank:WP_002209511.1;Name=WP_002209511.1;gbkey=CDS;product=type IV secretion protein Rhs;protein_id=WP_002209511.1;transl_table=11 NC_008149.1 RefSeq gene 4126097 4126600 . - . ID=gene3787;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=YPN_RS18965;old_locus_tag=YPN_3602 NC_008149.1 Protein Homology CDS 4126097 4126600 . - 0 ID=cds3689;Parent=gene3787;Dbxref=Genbank:WP_002209512.1;Name=WP_002209512.1;gbkey=CDS;gene=idnK;product=gluconokinase;protein_id=WP_002209512.1;transl_table=11 NC_008149.1 RefSeq gene 4126817 4128133 . + . ID=gene3788;Name=YPN_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18970;old_locus_tag=YPN_3603 NC_008149.1 Protein Homology CDS 4126817 4128133 . + 0 ID=cds3690;Parent=gene3788;Dbxref=Genbank:WP_002209513.1;Name=WP_002209513.1;gbkey=CDS;product=idonate transporter;protein_id=WP_002209513.1;transl_table=11 NC_008149.1 RefSeq gene 4128225 4129220 . - . ID=gene3789;Name=YPN_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18975;old_locus_tag=YPN_3604 NC_008149.1 Protein Homology CDS 4128225 4129220 . - 0 ID=cds3691;Parent=gene3789;Dbxref=Genbank:WP_002209514.1;Name=WP_002209514.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209514.1;transl_table=11 NC_008149.1 RefSeq gene 4129349 4130044 . - . ID=gene3790;Name=YPN_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18980;old_locus_tag=YPN_3605 NC_008149.1 Protein Homology CDS 4129349 4130044 . - 0 ID=cds3692;Parent=gene3790;Dbxref=Genbank:WP_002209515.1;Name=WP_002209515.1;gbkey=CDS;product=quercetin 2%2C3-dioxygenase;protein_id=WP_002209515.1;transl_table=11 NC_008149.1 RefSeq gene 4130539 4130808 . + . ID=gene3791;Name=YPN_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18985 NC_008149.1 Protein Homology CDS 4130539 4130808 . + 0 ID=cds3693;Parent=gene3791;Dbxref=Genbank:WP_002215491.1;Name=WP_002215491.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215491.1;transl_table=11 NC_008149.1 RefSeq gene 4130808 4131545 . + . ID=gene3792;Name=YPN_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18990;old_locus_tag=YPN_3607 NC_008149.1 Protein Homology CDS 4130808 4131545 . + 0 ID=cds3694;Parent=gene3792;Dbxref=Genbank:WP_002209516.1;Name=WP_002209516.1;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002209516.1;transl_table=11 NC_008149.1 RefSeq gene 4131730 4132737 . - . ID=gene3793;Name=YPN_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS18995;old_locus_tag=YPN_3608 NC_008149.1 Protein Homology CDS 4131730 4132737 . - 0 ID=cds3695;Parent=gene3793;Dbxref=Genbank:WP_002209518.1;Name=WP_002209518.1;gbkey=CDS;product=sugar kinase;protein_id=WP_002209518.1;transl_table=11 NC_008149.1 RefSeq gene 4132747 4133607 . - . ID=gene3794;Name=YPN_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19000;old_locus_tag=YPN_3609 NC_008149.1 Protein Homology CDS 4132747 4133607 . - 0 ID=cds3696;Parent=gene3794;Dbxref=Genbank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209519.1;transl_table=11 NC_008149.1 RefSeq gene 4133633 4134316 . - . ID=gene3795;Name=YPN_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19005;old_locus_tag=YPN_3610 NC_008149.1 Protein Homology CDS 4133633 4134316 . - 0 ID=cds3697;Parent=gene3795;Dbxref=Genbank:WP_002209520.1;Name=WP_002209520.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209520.1;transl_table=11 NC_008149.1 RefSeq gene 4134391 4135335 . - . ID=gene3796;Name=YPN_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19010;old_locus_tag=YPN_3611 NC_008149.1 Protein Homology CDS 4134391 4135335 . - 0 ID=cds3698;Parent=gene3796;Dbxref=Genbank:WP_002209521.1;Name=WP_002209521.1;gbkey=CDS;product=ribose ABC transporter substrate-binding protein;protein_id=WP_002209521.1;transl_table=11 NC_008149.1 RefSeq gene 4135366 4136358 . - . ID=gene3797;Name=YPN_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19015;old_locus_tag=YPN_3612 NC_008149.1 Protein Homology CDS 4135366 4136358 . - 0 ID=cds3699;Parent=gene3797;Dbxref=Genbank:WP_002209522.1;Name=WP_002209522.1;gbkey=CDS;product=ribose ABC transporter permease;protein_id=WP_002209522.1;transl_table=11 NC_008149.1 RefSeq gene 4136351 4137874 . - . ID=gene3798;Name=YPN_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19020;old_locus_tag=YPN_3613 NC_008149.1 Protein Homology CDS 4136351 4137874 . - 0 ID=cds3700;Parent=gene3798;Dbxref=Genbank:WP_002209523.1;Name=WP_002209523.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=WP_002209523.1;transl_table=11 NC_008149.1 RefSeq gene 4138063 4140618 . + . ID=gene3799;Name=YPN_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19025;old_locus_tag=YPN_3614 NC_008149.1 Protein Homology CDS 4138063 4140618 . + 0 ID=cds3701;Parent=gene3799;Dbxref=Genbank:WP_002209524.1;Name=WP_002209524.1;gbkey=CDS;product=histidine kinase;protein_id=WP_002209524.1;transl_table=11 NC_008149.1 RefSeq gene 4140754 4141950 . - . ID=gene3800;Name=YPN_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19030;old_locus_tag=YPN_3615 NC_008149.1 Protein Homology CDS 4140754 4141950 . - 0 ID=cds3702;Parent=gene3800;Dbxref=Genbank:WP_002215486.1;Name=WP_002215486.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215486.1;transl_table=11 NC_008149.1 RefSeq gene 4142261 4143757 . + . ID=gene3801;Name=YPN_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19035;old_locus_tag=YPN_3616 NC_008149.1 Protein Homology CDS 4142261 4143757 . + 0 ID=cds3703;Parent=gene3801;Dbxref=Genbank:WP_002209526.1;Name=WP_002209526.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_002209526.1;transl_table=11 NC_008149.1 RefSeq gene 4143863 4144033 . + . ID=gene3802;Name=YPN_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19040 NC_008149.1 Protein Homology CDS 4143863 4144033 . + 0 ID=cds3704;Parent=gene3802;Dbxref=Genbank:WP_025470767.1;Name=WP_025470767.1;gbkey=CDS;product=transposase;protein_id=WP_025470767.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4143867 4144591 . + . ID=id348;gbkey=repeat_region NC_008149.1 RefSeq gene 4144023 4144481 . + . ID=gene3803;Name=YPN_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19045;old_locus_tag=YPN_3617 NC_008149.1 Protein Homology CDS 4144023 4144481 . + 0 ID=cds3705;Parent=gene3803;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 4144614 4144949 . - . ID=gene3804;Name=YPN_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19050;old_locus_tag=YPN_3618 NC_008149.1 Protein Homology CDS 4144614 4144949 . - 0 ID=cds3706;Parent=gene3804;Dbxref=Genbank:WP_002209527.1;Name=WP_002209527.1;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;gbkey=CDS;product=universal stress protein B;protein_id=WP_002209527.1;transl_table=11 NC_008149.1 RefSeq gene 4145657 4146103 . + . ID=gene3805;Name=YPN_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19055;old_locus_tag=YPN_3619 NC_008149.1 Protein Homology CDS 4145657 4146103 . + 0 ID=cds3707;Parent=gene3805;Dbxref=Genbank:WP_002209528.1;Name=WP_002209528.1;Note=involved in resistance to DNA-damaging agents;gbkey=CDS;product=universal stress protein A;protein_id=WP_002209528.1;transl_table=11 NC_008149.1 RefSeq gene 4146350 4147693 . + . ID=gene3806;Name=YPN_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19060;old_locus_tag=YPN_3620 NC_008149.1 Protein Homology CDS 4146350 4147693 . + 0 ID=cds3708;Parent=gene3806;Dbxref=Genbank:WP_002209529.1;Name=WP_002209529.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;product=glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11 NC_008149.1 RefSeq gene 4147941 4149275 . + . ID=gene3807;Name=YPN_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19065;old_locus_tag=YPN_3621 NC_008149.1 Protein Homology CDS 4147941 4149275 . + 0 ID=cds3709;Parent=gene3807;Dbxref=Genbank:WP_002209530.1;Name=WP_002209530.1;gbkey=CDS;product=peptidase M10;protein_id=WP_002209530.1;transl_table=11 NC_008149.1 RefSeq gene 4149340 4150110 . - . ID=gene3808;Name=YPN_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19070;old_locus_tag=YPN_3622 NC_008149.1 Protein Homology CDS 4149340 4150110 . - 0 ID=cds3710;Parent=gene3808;Dbxref=Genbank:WP_002215483.1;Name=WP_002215483.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase J;protein_id=WP_002215483.1;transl_table=11 NC_008149.1 RefSeq gene 4150114 4152156 . - . ID=gene3809;Name=YPN_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19075;old_locus_tag=YPN_3623 NC_008149.1 Protein Homology CDS 4150114 4152156 . - 0 ID=cds3711;Parent=gene3809;Dbxref=Genbank:WP_002209531.1;Name=WP_002209531.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_002209531.1;transl_table=11 NC_008149.1 RefSeq gene 4152485 4153327 . + . ID=gene3810;Name=YPN_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19080;old_locus_tag=YPN_3625 NC_008149.1 Protein Homology CDS 4152485 4153327 . + 0 ID=cds3712;Parent=gene3810;Dbxref=Genbank:WP_002209533.1;Name=WP_002209533.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209533.1;transl_table=11 NC_008149.1 RefSeq gene 4153513 4154865 . + . ID=gene3811;Name=YPN_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19085;old_locus_tag=YPN_3626 NC_008149.1 Protein Homology CDS 4153513 4154865 . + 0 ID=cds3713;Parent=gene3811;Dbxref=Genbank:WP_002209534.1;Name=WP_002209534.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;product=glutathione reductase;protein_id=WP_002209534.1;transl_table=11 NC_008149.1 RefSeq gene 4155057 4156184 . + . ID=gene3812;Name=YPN_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19090;old_locus_tag=YPN_3627 NC_008149.1 Protein Homology CDS 4155057 4156184 . + 0 ID=cds3714;Parent=gene3812;Dbxref=Genbank:WP_002209535.1;Name=WP_002209535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209535.1;transl_table=11 NC_008149.1 RefSeq gene 4156362 4157630 . + . ID=gene3813;Name=YPN_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19095;old_locus_tag=YPN_3629 NC_008149.1 Protein Homology CDS 4156362 4157630 . + 0 ID=cds3715;Parent=gene3813;Dbxref=Genbank:WP_002209536.1;Name=WP_002209536.1;gbkey=CDS;product=gluconate:proton symporter;protein_id=WP_002209536.1;transl_table=11 NC_008149.1 RefSeq gene 4157641 4158777 . + . ID=gene3814;Name=YPN_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19100;old_locus_tag=YPN_3630 NC_008149.1 Protein Homology CDS 4157641 4158777 . + 0 ID=cds3716;Parent=gene3814;Dbxref=Genbank:WP_002209537.1;Name=WP_002209537.1;gbkey=CDS;product=glycerate kinase;protein_id=WP_002209537.1;transl_table=11 NC_008149.1 RefSeq gene 4159023 4159529 . - . ID=gene3815;Name=YPN_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19105;old_locus_tag=YPN_3631 NC_008149.1 Protein Homology CDS 4159023 4159529 . - 0 ID=cds3717;Parent=gene3815;Dbxref=Genbank:WP_002209538.1;Name=WP_002209538.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209538.1;transl_table=11 NC_008149.1 RefSeq gene 4159597 4160094 . - . ID=gene3816;Name=YPN_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19110;old_locus_tag=YPN_3632 NC_008149.1 Protein Homology CDS 4159597 4160094 . - 0 ID=cds3718;Parent=gene3816;Dbxref=Genbank:WP_002209539.1;Name=WP_002209539.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209539.1;transl_table=11 NC_008149.1 RefSeq gene 4160096 4160875 . - . ID=gene3817;Name=YPN_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19115;old_locus_tag=YPN_3633 NC_008149.1 Protein Homology CDS 4160096 4160875 . - 0 ID=cds3719;Parent=gene3817;Dbxref=Genbank:WP_002209540.1;Name=WP_002209540.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209540.1;transl_table=11 NC_008149.1 RefSeq gene 4161053 4164265 . - . ID=gene3818;Name=YPN_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19120;old_locus_tag=YPN_3634 NC_008149.1 Protein Homology CDS 4161053 4164265 . - 0 ID=cds3720;Parent=gene3818;Dbxref=Genbank:WP_002214773.1;Name=WP_002214773.1;gbkey=CDS;product=autotransporter;protein_id=WP_002214773.1;transl_table=11 NC_008149.1 RefSeq gene 4164943 4166025 . + . ID=gene3819;Name=YPN_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19125;old_locus_tag=YPN_3635 NC_008149.1 Protein Homology CDS 4164943 4166025 . + 0 ID=cds3721;Parent=gene3819;Dbxref=Genbank:WP_002209545.1;Name=WP_002209545.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209545.1;transl_table=11 NC_008149.1 RefSeq gene 4166029 4166826 . + . ID=gene3820;Name=YPN_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19130;old_locus_tag=YPN_3636 NC_008149.1 Protein Homology CDS 4166029 4166826 . + 0 ID=cds3722;Parent=gene3820;Dbxref=Genbank:WP_002209546.1;Name=WP_002209546.1;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=WP_002209546.1;transl_table=11 NC_008149.1 RefSeq gene 4166803 4169019 . - . ID=gene3821;Name=YPN_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19135;old_locus_tag=YPN_3637 NC_008149.1 Protein Homology CDS 4166803 4169019 . - 0 ID=cds3723;Parent=gene3821;Dbxref=Genbank:WP_002228712.1;Name=WP_002228712.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228712.1;transl_table=11 NC_008149.1 RefSeq gene 4169324 4170169 . - . ID=gene3822;Name=YPN_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19140;old_locus_tag=YPN_3638 NC_008149.1 Protein Homology CDS 4169324 4170169 . - 0 ID=cds3724;Parent=gene3822;Dbxref=Genbank:WP_002209547.1;Name=WP_002209547.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;product=cyclic di-GMP phosphodiesterase;protein_id=WP_002209547.1;transl_table=11 NC_008149.1 RefSeq gene 4170388 4170588 . + . ID=gene3823;Name=YPN_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19145 NC_008149.1 Protein Homology CDS 4170388 4170588 . + 0 ID=cds3725;Parent=gene3823;Dbxref=Genbank:WP_002209548.1;Name=WP_002209548.1;gbkey=CDS;product=tautomerase;protein_id=WP_002209548.1;transl_table=11 NC_008149.1 RefSeq gene 4170867 4171811 . + . ID=gene3824;Name=YPN_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19150;old_locus_tag=YPN_3640 NC_008149.1 Protein Homology CDS 4170867 4171811 . + 0 ID=cds3726;Parent=gene3824;Dbxref=Genbank:WP_002209549.1;Name=WP_002209549.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate;gbkey=CDS;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_002209549.1;transl_table=11 NC_008149.1 RefSeq gene 4171975 4173474 . - . ID=gene3825;Name=YPN_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19155;old_locus_tag=YPN_3641 NC_008149.1 Protein Homology CDS 4171975 4173474 . - 0 ID=cds3727;Parent=gene3825;Dbxref=Genbank:WP_002209550.1;Name=WP_002209550.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209550.1;transl_table=11 NC_008149.1 RefSeq gene 4173839 4175128 . - . ID=gene3826;Name=YPN_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19160;old_locus_tag=YPN_3642 NC_008149.1 Protein Homology CDS 4173839 4175128 . - 0 ID=cds3728;Parent=gene3826;Dbxref=Genbank:WP_002209553.1;Name=WP_002209553.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;product=C4-dicarboxylate transporter;protein_id=WP_002209553.1;transl_table=11 NC_008149.1 RefSeq gene 4175583 4176062 . - . ID=gene3827;Name=YPN_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19165;old_locus_tag=YPN_3643 NC_008149.1 Protein Homology CDS 4175583 4176062 . - 0 ID=cds3729;Parent=gene3827;Dbxref=Genbank:WP_002209554.1;Name=WP_002209554.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209554.1;transl_table=11 NC_008149.1 RefSeq gene 4176187 4177905 . - . ID=gene3828;Name=YPN_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19170;old_locus_tag=YPN_3644 NC_008149.1 Protein Homology CDS 4176187 4177905 . - 0 ID=cds3730;Parent=gene3828;Dbxref=Genbank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11 NC_008149.1 RefSeq gene 4178151 4178855 . - . ID=gene3829;Name=YPN_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19175;old_locus_tag=YPN_3645 NC_008149.1 Protein Homology CDS 4178151 4178855 . - 0 ID=cds3731;Parent=gene3829;Dbxref=Genbank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;product=porin;protein_id=WP_002209559.1;transl_table=11 NC_008149.1 RefSeq gene 4179495 4181477 . - . ID=gene3830;Name=YPN_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19180;old_locus_tag=YPN_3646 NC_008149.1 Protein Homology CDS 4179495 4181477 . - 0 ID=cds3732;Parent=gene3830;Dbxref=Genbank:WP_002214767.1;Name=WP_002214767.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein;gbkey=CDS;product=biofilm formation regulator HmsP;protein_id=WP_002214767.1;transl_table=11 NC_008149.1 RefSeq gene 4181824 4182723 . - . ID=gene3831;Name=YPN_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19185;old_locus_tag=YPN_3647 NC_008149.1 Protein Homology CDS 4181824 4182723 . - 0 ID=cds3733;Parent=gene3831;Dbxref=Genbank:WP_002214765.1;Name=WP_002214765.1;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;gbkey=CDS;product=endonuclease III;protein_id=WP_002214765.1;transl_table=11 NC_008149.1 RefSeq gene 4183042 4184049 . - . ID=gene3832;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=YPN_RS19190;old_locus_tag=YPN_3648 NC_008149.1 Protein Homology CDS 4183042 4184049 . - 0 ID=cds3734;Parent=gene3832;Dbxref=Genbank:WP_002228160.1;Name=WP_002228160.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002228160.1;transl_table=11 NC_008149.1 RefSeq gene 4184115 4185095 . - . ID=gene3833;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=YPN_RS19195;old_locus_tag=YPN_3649 NC_008149.1 Protein Homology CDS 4184115 4185095 . - 0 ID=cds3735;Parent=gene3833;Dbxref=Genbank:WP_002209562.1;Name=WP_002209562.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=peptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11 NC_008149.1 RefSeq gene 4185109 4186011 . - . ID=gene3834;Name=YPN_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19200;old_locus_tag=YPN_3650 NC_008149.1 Protein Homology CDS 4185109 4186011 . - 0 ID=cds3736;Parent=gene3834;Dbxref=Genbank:WP_002209563.1;Name=WP_002209563.1;gbkey=CDS;product=peptide ABC transporter;protein_id=WP_002209563.1;transl_table=11 NC_008149.1 RefSeq gene 4186022 4187041 . - . ID=gene3835;Name=YPN_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19205;old_locus_tag=YPN_3651 NC_008149.1 Protein Homology CDS 4186022 4187041 . - 0 ID=cds3737;Parent=gene3835;Dbxref=Genbank:WP_002228714.1;Name=WP_002228714.1;gbkey=CDS;product=peptide ABC transporter permease;protein_id=WP_002228714.1;transl_table=11 NC_008149.1 RefSeq gene 4187324 4188931 . - . ID=gene3836;Name=YPN_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19210;old_locus_tag=YPN_3652 NC_008149.1 Protein Homology CDS 4187324 4188931 . - 0 ID=cds3738;Parent=gene3836;Dbxref=Genbank:WP_002209564.1;Name=WP_002209564.1;Note=DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides;gbkey=CDS;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002209564.1;transl_table=11 NC_008149.1 RefSeq gene 4189334 4189540 . - . ID=gene3837;Name=YPN_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19215 NC_008149.1 Protein Homology CDS 4189334 4189540 . - 0 ID=cds3739;Parent=gene3837;Dbxref=Genbank:WP_002217329.1;Name=WP_002217329.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217329.1;transl_table=11 NC_008149.1 RefSeq gene 4189600 4191270 . - . ID=gene3838;Name=YPN_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19220;old_locus_tag=YPN_3653 NC_008149.1 Protein Homology CDS 4189600 4191270 . - 0 ID=cds3740;Parent=gene3838;Dbxref=Genbank:WP_002209565.1;Name=WP_002209565.1;gbkey=CDS;product=hemolysin secretion protein ShlB;protein_id=WP_002209565.1;transl_table=11 NC_008149.1 RefSeq gene 4191472 4192863 . - . ID=gene3839;Name=YPN_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19225;old_locus_tag=YPN_3654 NC_008149.1 Protein Homology CDS 4191472 4192863 . - 0 ID=cds3741;Parent=gene3839;Dbxref=Genbank:WP_002224153.1;Name=WP_002224153.1;gbkey=CDS;product=hemagglutinin;protein_id=WP_002224153.1;transl_table=11 NC_008149.1 RefSeq gene 4193176 4193252 . - . ID=gene3840;Name=YPN_RS19230;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPN_RS19230;old_locus_tag=YPN_r107 NC_008149.1 tRNAscan-SE tRNA 4193176 4193252 . - . ID=rna92;Parent=gene3840;anticodon=(pos:complement(4193216..4193218));gbkey=tRNA;product=tRNA-Pro NC_008149.1 tRNAscan-SE exon 4193176 4193252 . - . ID=id349;Parent=rna92;anticodon=(pos:complement(4193216..4193218));gbkey=tRNA;product=tRNA-Pro NC_008149.1 RefSeq gene 4193369 4194700 . - . ID=gene3841;Name=YPN_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19235;old_locus_tag=YPN_3655 NC_008149.1 Protein Homology CDS 4193369 4194700 . - 0 ID=cds3742;Parent=gene3841;Dbxref=Genbank:WP_002209567.1;Name=WP_002209567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209567.1;transl_table=11 NC_008149.1 RefSeq gene 4194795 4195475 . - . ID=gene3842;Name=YPN_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19240;old_locus_tag=YPN_3656 NC_008149.1 Protein Homology CDS 4194795 4195475 . - 0 ID=cds3743;Parent=gene3842;Dbxref=Genbank:WP_002361295.1;Name=WP_002361295.1;gbkey=CDS;product=two-component system sensor histidine kinase;protein_id=WP_002361295.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4195532 4197490 . + . ID=id350;gbkey=repeat_region NC_008149.1 RefSeq gene 4195600 4196379 . - . ID=gene3843;Name=YPN_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19245;old_locus_tag=YPN_3657 NC_008149.1 Protein Homology CDS 4195600 4196379 . - 0 ID=cds3744;Parent=gene3843;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 4196379 4197401 . - . ID=gene3844;Name=YPN_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19250;old_locus_tag=YPN_3658 NC_008149.1 Protein Homology CDS 4196379 4197401 . - 0 ID=cds3745;Parent=gene3844;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 4197483 4198283 . - . ID=gene3845;Name=YPN_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19255;old_locus_tag=YPN_3659 NC_008149.1 Protein Homology CDS 4197483 4198283 . - 0 ID=cds3746;Parent=gene3845;Dbxref=Genbank:WP_002209569.1;Name=WP_002209569.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209569.1;transl_table=11 NC_008149.1 RefSeq gene 4198280 4198870 . - . ID=gene3846;Name=YPN_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19260;old_locus_tag=YPN_3660 NC_008149.1 Protein Homology CDS 4198280 4198870 . - 0 ID=cds3747;Parent=gene3846;Dbxref=Genbank:WP_002209570.1;Name=WP_002209570.1;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209570.1;transl_table=11 NC_008149.1 RefSeq gene 4198986 4200677 . - . ID=gene3847;Name=YPN_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19265;old_locus_tag=YPN_3661 NC_008149.1 Protein Homology CDS 4198986 4200677 . - 0 ID=cds3748;Parent=gene3847;Dbxref=Genbank:WP_002209571.1;Name=WP_002209571.1;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;gbkey=CDS;product=phosphoethanolamine transferase;protein_id=WP_002209571.1;transl_table=11 NC_008149.1 RefSeq gene 4201206 4202669 . - . ID=gene3848;Name=YPN_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19270;old_locus_tag=YPN_3662 NC_008149.1 Protein Homology CDS 4201206 4202669 . - 0 ID=cds3749;Parent=gene3848;Dbxref=Genbank:WP_002209573.1;Name=WP_002209573.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209573.1;transl_table=11 NC_008149.1 RefSeq gene 4203137 4204540 . - . ID=gene3849;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPN_RS19275;old_locus_tag=YPN_3663 NC_008149.1 Protein Homology CDS 4203137 4204540 . - 0 ID=cds3750;Parent=gene3849;Dbxref=Genbank:WP_002214368.1;Name=WP_002214368.1;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;gbkey=CDS;gene=proY;product=permease;protein_id=WP_002214368.1;transl_table=11 NC_008149.1 RefSeq gene 4204958 4206490 . - . ID=gene3850;Name=YPN_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19280;old_locus_tag=YPN_3664 NC_008149.1 Protein Homology CDS 4204958 4206490 . - 0 ID=cds3751;Parent=gene3850;Dbxref=Genbank:WP_002209575.1;Name=WP_002209575.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;product=histidine ammonia-lyase;protein_id=WP_002209575.1;transl_table=11 NC_008149.1 RefSeq gene 4206487 4208178 . - . ID=gene3851;Name=YPN_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19285;old_locus_tag=YPN_3665 NC_008149.1 Protein Homology CDS 4206487 4208178 . - 0 ID=cds3752;Parent=gene3851;Dbxref=Genbank:WP_002209576.1;Name=WP_002209576.1;Note=catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism;gbkey=CDS;product=urocanate hydratase;protein_id=WP_002209576.1;transl_table=11 NC_008149.1 RefSeq gene 4208905 4209849 . + . ID=gene3852;Name=YPN_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19290;old_locus_tag=YPN_3666 NC_008149.1 Protein Homology CDS 4208905 4209849 . + 0 ID=cds3753;Parent=gene3852;Dbxref=Genbank:WP_002209577.1;Name=WP_002209577.1;gbkey=CDS;product=pyridoxal-5'-phosphate-dependent protein;protein_id=WP_002209577.1;transl_table=11 NC_008149.1 RefSeq gene 4209846 4210412 . + . ID=gene3853;Name=YPN_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19295;old_locus_tag=YPN_3667 NC_008149.1 Protein Homology CDS 4209846 4210412 . + 0 ID=cds3754;Parent=gene3853;Dbxref=Genbank:WP_002209578.1;Name=WP_002209578.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=WP_002209578.1;transl_table=11 NC_008149.1 RefSeq gene 4210495 4211424 . + . ID=gene3854;Name=YPN_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19300;old_locus_tag=YPN_3668 NC_008149.1 Protein Homology CDS 4210495 4211424 . + 0 ID=cds3755;Parent=gene3854;Dbxref=Genbank:WP_002209579.1;Name=WP_002209579.1;gbkey=CDS;product=transporter;protein_id=WP_002209579.1;transl_table=11 NC_008149.1 RefSeq gene 4211426 4212670 . + . ID=gene3855;Name=YPN_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19305;old_locus_tag=YPN_3669 NC_008149.1 Protein Homology CDS 4211426 4212670 . + 0 ID=cds3756;Parent=gene3855;Dbxref=Genbank:WP_002209580.1;Name=WP_002209580.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209580.1;transl_table=11 NC_008149.1 RefSeq gene 4213193 4214146 . + . ID=gene3856;Name=YPN_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19310;old_locus_tag=YPN_3670 NC_008149.1 Protein Homology CDS 4213193 4214146 . + 0 ID=cds3757;Parent=gene3856;Dbxref=Genbank:WP_002209581.1;Name=WP_002209581.1;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=WP_002209581.1;transl_table=11 NC_008149.1 RefSeq gene 4214156 4215115 . + . ID=gene3857;Name=YPN_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19315;old_locus_tag=YPN_3671 NC_008149.1 Protein Homology CDS 4214156 4215115 . + 0 ID=cds3758;Parent=gene3857;Dbxref=Genbank:WP_002209582.1;Name=WP_002209582.1;gbkey=CDS;product=iron ABC transporter permease;protein_id=WP_002209582.1;transl_table=11 NC_008149.1 RefSeq gene 4215105 4216112 . + . ID=gene3858;Name=YPN_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19320;old_locus_tag=YPN_3672 NC_008149.1 Protein Homology CDS 4215105 4216112 . + 0 ID=cds3759;Parent=gene3858;Dbxref=Genbank:WP_002209583.1;Name=WP_002209583.1;gbkey=CDS;product=enterobactin ABC transporter permease;protein_id=WP_002209583.1;transl_table=11 NC_008149.1 RefSeq gene 4216109 4216867 . + . ID=gene3859;Name=YPN_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19325;old_locus_tag=YPN_3673 NC_008149.1 Protein Homology CDS 4216109 4216867 . + 0 ID=cds3760;Parent=gene3859;Dbxref=Genbank:WP_002209584.1;Name=WP_002209584.1;gbkey=CDS;product=iron ABC transporter ATP-binding protein;protein_id=WP_002209584.1;transl_table=11 NC_008149.1 RefSeq gene 4216864 4217364 . - . ID=gene3860;Name=YPN_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19330;old_locus_tag=YPN_3674 NC_008149.1 Protein Homology CDS 4216864 4217364 . - 0 ID=cds3761;Parent=gene3860;Dbxref=Genbank:WP_002214364.1;Name=WP_002214364.1;gbkey=CDS;product=toxin Fic;protein_id=WP_002214364.1;transl_table=11 NC_008149.1 RefSeq gene 4217600 4217785 . - . ID=gene3861;Name=YPN_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19335;old_locus_tag=YPN_3675 NC_008149.1 Protein Homology CDS 4217600 4217785 . - 0 ID=cds3762;Parent=gene3861;Dbxref=Genbank:WP_002214362.1;Name=WP_002214362.1;gbkey=CDS;product=XRE family transcriptional regulator;protein_id=WP_002214362.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4218172 4218427 . + . ID=id351;gbkey=repeat_region NC_008149.1 RefSeq gene 4218813 4219175 . + . ID=gene3862;Name=YPN_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19340;old_locus_tag=YPN_3676 NC_008149.1 Protein Homology CDS 4218813 4219175 . + 0 ID=cds3763;Parent=gene3862;Dbxref=Genbank:WP_002209585.1;Name=WP_002209585.1;gbkey=CDS;product=2-hydroxyacid dehydrogenase;protein_id=WP_002209585.1;transl_table=11 NC_008149.1 RefSeq gene 4219368 4219853 . + . ID=gene3863;Name=YPN_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19345;old_locus_tag=YPN_3677 NC_008149.1 Protein Homology CDS 4219368 4219853 . + 0 ID=cds3764;Parent=gene3863;Dbxref=Genbank:WP_002214360.1;Name=WP_002214360.1;gbkey=CDS;product=transposase;protein_id=WP_002214360.1;transl_table=11 NC_008149.1 RefSeq gene 4219853 4220146 . + . ID=gene3864;Name=YPN_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19350;old_locus_tag=YPN_3678 NC_008149.1 Protein Homology CDS 4219853 4220146 . + 0 ID=cds3765;Parent=gene3864;Dbxref=Genbank:WP_002361323.1;Name=WP_002361323.1;gbkey=CDS;product=transposase;protein_id=WP_002361323.1;transl_table=11 NC_008149.1 RefSeq gene 4220320 4220565 . + . ID=gene3865;Name=YPN_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19355 NC_008149.1 Protein Homology CDS 4220320 4220565 . + 0 ID=cds3766;Parent=gene3865;Dbxref=Genbank:WP_002214358.1;Name=WP_002214358.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214358.1;transl_table=11 NC_008149.1 RefSeq gene 4220833 4222212 . - . ID=gene3866;Name=YPN_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19360;old_locus_tag=YPN_3679 NC_008149.1 Protein Homology CDS 4220833 4222212 . - 0 ID=cds3767;Parent=gene3866;Dbxref=Genbank:WP_002209586.1;Name=WP_002209586.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209586.1;transl_table=11 NC_008149.1 RefSeq gene 4222199 4223392 . - . ID=gene3867;Name=YPN_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19365;old_locus_tag=YPN_3680 NC_008149.1 Protein Homology CDS 4222199 4223392 . - 0 ID=cds3768;Parent=gene3867;Dbxref=Genbank:WP_002209587.1;Name=WP_002209587.1;gbkey=CDS;product=integrase;protein_id=WP_002209587.1;transl_table=11 NC_008149.1 RefSeq gene 4223778 4224971 . - . ID=gene3868;Name=YPN_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19370;old_locus_tag=YPN_3681 NC_008149.1 Protein Homology CDS 4223778 4224971 . - 0 ID=cds3769;Parent=gene3868;Dbxref=Genbank:WP_002209588.1;Name=WP_002209588.1;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=WP_002209588.1;transl_table=11 NC_008149.1 RefSeq gene 4225061 4226245 . - . ID=gene3869;Name=YPN_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19375;old_locus_tag=YPN_3682 NC_008149.1 Protein Homology CDS 4225061 4226245 . - 0 ID=cds3770;Parent=gene3869;Dbxref=Genbank:WP_002209589.1;Name=WP_002209589.1;gbkey=CDS;product=xylose ABC transporter permease;protein_id=WP_002209589.1;transl_table=11 NC_008149.1 RefSeq gene 4226232 4227764 . - . ID=gene3870;Name=YPN_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19380;old_locus_tag=YPN_3683 NC_008149.1 Protein Homology CDS 4226232 4227764 . - 0 ID=cds3771;Parent=gene3870;Dbxref=Genbank:WP_002209590.1;Name=WP_002209590.1;Note=with XylFH is part of the high affinity xylose ABC transporter;gbkey=CDS;product=xylose import ATP-binding protein XylG;protein_id=WP_002209590.1;transl_table=11 NC_008149.1 RefSeq gene 4227972 4228967 . - . ID=gene3871;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=YPN_RS19385;old_locus_tag=YPN_3684 NC_008149.1 Protein Homology CDS 4227972 4228967 . - 0 ID=cds3772;Parent=gene3871;Dbxref=Genbank:WP_002209591.1;Name=WP_002209591.1;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;gbkey=CDS;gene=xylF;product=xylose ABC transporter substrate-binding protein;protein_id=WP_002209591.1;transl_table=11 NC_008149.1 RefSeq gene 4229430 4230749 . + . ID=gene3872;Name=YPN_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19390;old_locus_tag=YPN_3685 NC_008149.1 Protein Homology CDS 4229430 4230749 . + 0 ID=cds3773;Parent=gene3872;Dbxref=Genbank:WP_002209593.1;Name=WP_002209593.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;product=xylose isomerase;protein_id=WP_002209593.1;transl_table=11 NC_008149.1 RefSeq gene 4230873 4232327 . + . ID=gene3873;Name=YPN_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19395;old_locus_tag=YPN_3686 NC_008149.1 Protein Homology CDS 4230873 4232327 . + 0 ID=cds3774;Parent=gene3873;Dbxref=Genbank:WP_002209594.1;Name=WP_002209594.1;Note=catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose;gbkey=CDS;product=xylulokinase;protein_id=WP_002209594.1;transl_table=11 NC_008149.1 RefSeq gene 4232445 4233431 . - . ID=gene3874;Name=YPN_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19400;old_locus_tag=YPN_3687 NC_008149.1 Protein Homology CDS 4232445 4233431 . - 0 ID=cds3775;Parent=gene3874;Dbxref=Genbank:WP_002209595.1;Name=WP_002209595.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209595.1;transl_table=11 NC_008149.1 RefSeq gene 4233470 4234237 . - . ID=gene3875;Name=YPN_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19405;old_locus_tag=YPN_3688 NC_008149.1 Protein Homology CDS 4233470 4234237 . - 0 ID=cds3776;Parent=gene3875;Dbxref=Genbank:WP_002209596.1;Name=WP_002209596.1;gbkey=CDS;product=fimbrial chaperone protein StdC;protein_id=WP_002209596.1;transl_table=11 NC_008149.1 RefSeq gene 4234330 4236820 . - . ID=gene3876;Name=YPN_RS19410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS19410;old_locus_tag=YPN_3690;pseudo=true NC_008149.1 Protein Homology CDS 4234330 4236820 . - 0 ID=cds3777;Parent=gene3876;exception=annotated by transcript or proteomic data;gbkey=CDS;product=fimbrial protein;pseudo=true;transl_except=(pos:complement(4234978..4234980)%2Caa:Other);transl_table=11 NC_008149.1 RefSeq gene 4236896 4237453 . - . ID=gene3877;Name=YPN_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19415;old_locus_tag=YPN_3691 NC_008149.1 Protein Homology CDS 4236896 4237453 . - 0 ID=cds3778;Parent=gene3877;Dbxref=Genbank:WP_002209597.1;Name=WP_002209597.1;gbkey=CDS;product=fimbrial protein;protein_id=WP_002209597.1;transl_table=11 NC_008149.1 RefSeq gene 4238335 4239327 . - . ID=gene3878;Name=YPN_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19420;old_locus_tag=YPN_3692 NC_008149.1 Protein Homology CDS 4238335 4239327 . - 0 ID=cds3779;Parent=gene3878;Dbxref=Genbank:WP_002209600.1;Name=WP_002209600.1;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen;gbkey=CDS;product=O-acetyltransferase;protein_id=WP_002209600.1;transl_table=11 NC_008149.1 RefSeq gene 4239524 4240198 . + . ID=gene3879;Name=YPN_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19425;old_locus_tag=YPN_3693 NC_008149.1 Protein Homology CDS 4239524 4240198 . + 0 ID=cds3780;Parent=gene3879;Dbxref=Genbank:WP_002209602.1;Name=WP_002209602.1;gbkey=CDS;product=transposase;protein_id=WP_002209602.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4239552 4241284 . + . ID=id352;gbkey=repeat_region NC_008149.1 RefSeq gene 4240252 4241037 . + . ID=gene3880;Name=YPN_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19430;old_locus_tag=YPN_3694 NC_008149.1 Protein Homology CDS 4240252 4241037 . + 0 ID=cds3781;Parent=gene3880;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_008149.1 RefSeq gene 4241510 4242739 . + . ID=gene3881;Name=YPN_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19435;old_locus_tag=YPN_3695 NC_008149.1 Protein Homology CDS 4241510 4242739 . + 0 ID=cds3782;Parent=gene3881;Dbxref=Genbank:WP_002215753.1;Name=WP_002215753.1;gbkey=CDS;product=multidrug transporter MdfA;protein_id=WP_002215753.1;transl_table=11 NC_008149.1 RefSeq gene 4242888 4243091 . - . ID=gene3882;Name=YPN_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19440 NC_008149.1 Protein Homology CDS 4242888 4243091 . - 0 ID=cds3783;Parent=gene3882;Dbxref=Genbank:WP_002209605.1;Name=WP_002209605.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209605.1;transl_table=11 NC_008149.1 RefSeq gene 4243212 4243370 . + . ID=gene3883;Name=YPN_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19445;old_locus_tag=YPN_3696 NC_008149.1 Protein Homology CDS 4243212 4243370 . + 0 ID=cds3784;Parent=gene3883;Dbxref=Genbank:WP_002215752.1;Name=WP_002215752.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215752.1;transl_table=11 NC_008149.1 RefSeq gene 4243449 4244030 . + . ID=gene3884;Name=YPN_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19450;old_locus_tag=YPN_3697 NC_008149.1 Protein Homology CDS 4243449 4244030 . + 0 ID=cds3785;Parent=gene3884;Dbxref=Genbank:WP_002215751.1;Name=WP_002215751.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215751.1;transl_table=11 NC_008149.1 RefSeq gene 4244044 4244376 . - . ID=gene3885;Name=YPN_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19455;old_locus_tag=YPN_3698 NC_008149.1 Protein Homology CDS 4244044 4244376 . - 0 ID=cds3786;Parent=gene3885;Dbxref=Genbank:WP_002215750.1;Name=WP_002215750.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215750.1;transl_table=11 NC_008149.1 RefSeq gene 4244665 4245129 . + . ID=gene3886;Name=YPN_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19460;old_locus_tag=YPN_3699 NC_008149.1 Protein Homology CDS 4244665 4245129 . + 0 ID=cds3787;Parent=gene3886;Dbxref=Genbank:WP_002209607.1;Name=WP_002209607.1;gbkey=CDS;product=transposase;protein_id=WP_002209607.1;transl_table=11 NC_008149.1 RefSeq gene 4245136 4247088 . - . ID=gene3887;Name=YPN_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19465;old_locus_tag=YPN_3700 NC_008149.1 Protein Homology CDS 4245136 4247088 . - 0 ID=cds3788;Parent=gene3887;Dbxref=Genbank:WP_002223796.1;Name=WP_002223796.1;gbkey=CDS;product=selenocysteine-specific translation elongation factor;protein_id=WP_002223796.1;transl_table=11 NC_008149.1 RefSeq gene 4247085 4248473 . - . ID=gene3888;Name=YPN_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19470;old_locus_tag=YPN_3701 NC_008149.1 Protein Homology CDS 4247085 4248473 . - 0 ID=cds3789;Parent=gene3888;Dbxref=Genbank:WP_002209608.1;Name=WP_002209608.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_002209608.1;transl_table=11 NC_008149.1 RefSeq gene 4248657 4249586 . - . ID=gene3889;Name=YPN_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19475;old_locus_tag=YPN_3702 NC_008149.1 Protein Homology CDS 4248657 4249586 . - 0 ID=cds3790;Parent=gene3889;Dbxref=Genbank:WP_002209609.1;Name=WP_002209609.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;product=protein FdhE;protein_id=WP_002209609.1;transl_table=11 NC_008149.1 RefSeq gene 4249586 4250260 . - . ID=gene3890;Name=YPN_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19480;old_locus_tag=YPN_3703 NC_008149.1 Protein Homology CDS 4249586 4250260 . - 0 ID=cds3791;Parent=gene3890;Dbxref=Genbank:WP_002209610.1;Name=WP_002209610.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;product=formate dehydrogenase-N subunit gamma;protein_id=WP_002209610.1;transl_table=11 NC_008149.1 RefSeq gene 4250257 4251228 . - . ID=gene3891;Name=YPN_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19485;old_locus_tag=YPN_3704 NC_008149.1 Protein Homology CDS 4250257 4251228 . - 0 ID=cds3792;Parent=gene3891;Dbxref=Genbank:WP_002209611.1;Name=WP_002209611.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;product=formate dehydrogenase-N subunit beta;protein_id=WP_002209611.1;transl_table=11 NC_008149.1 RefSeq gene 4251241 4253652 . - . ID=gene3892;Name=YPN_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19490;old_locus_tag=YPN_3705 NC_008149.1 Protein Homology CDS 4251241 4253652 . - 0 ID=cds3793;Parent=gene3892;Dbxref=Genbank:WP_002231683.1;Name=WP_002231683.1;gbkey=CDS;product=formate dehydrogenase subunit alpha;protein_id=WP_002231683.1;transl_table=11 NC_008149.1 RefSeq gene 4253701 4254288 . - . ID=gene3893;Name=YPN_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19495;old_locus_tag=YPN_3706 NC_008149.1 Protein Homology CDS 4253701 4254288 . - 0 ID=cds3794;Parent=gene3893;Dbxref=Genbank:WP_002231685.1;Name=WP_002231685.1;gbkey=CDS;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002231685.1;transl_table=11 NC_008149.1 RefSeq gene 4254485 4255309 . + . ID=gene3894;Name=YPN_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19500;old_locus_tag=YPN_3707 NC_008149.1 Protein Homology CDS 4254485 4255309 . + 0 ID=cds3795;Parent=gene3894;Dbxref=Genbank:WP_002209612.1;Name=WP_002209612.1;gbkey=CDS;product=protein FdhD;protein_id=WP_002209612.1;transl_table=11 NC_008149.1 RefSeq gene 4255745 4256368 . + . ID=gene3895;Name=YPN_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19505;old_locus_tag=YPN_3708 NC_008149.1 Protein Homology CDS 4255745 4256368 . + 0 ID=cds3796;Parent=gene3895;Dbxref=Genbank:WP_002209614.1;Name=WP_002209614.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_002209614.1;transl_table=11 NC_008149.1 RefSeq gene 4256712 4258661 . + . ID=gene3896;Name=YPN_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19510;old_locus_tag=YPN_3709 NC_008149.1 Protein Homology CDS 4256712 4258661 . + 0 ID=cds3797;Parent=gene3896;Dbxref=Genbank:WP_002209615.1;Name=WP_002209615.1;gbkey=CDS;product=chemotaxis protein;protein_id=WP_002209615.1;transl_table=11 NC_008149.1 RefSeq gene 4258851 4259183 . + . ID=gene3897;Name=YPN_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19515;old_locus_tag=YPN_3710 NC_008149.1 Protein Homology CDS 4258851 4259183 . + 0 ID=cds3798;Parent=gene3897;Dbxref=Genbank:WP_002217114.1;Name=WP_002217114.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217114.1;transl_table=11 NC_008149.1 RefSeq gene 4259715 4260191 . + . ID=gene3898;Name=YPN_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19520;old_locus_tag=YPN_3711 NC_008149.1 Protein Homology CDS 4259715 4260191 . + 0 ID=cds3799;Parent=gene3898;Dbxref=Genbank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209617.1;transl_table=11 NC_008149.1 RefSeq gene 4260360 4260716 . - . ID=gene3899;Name=YPN_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19525;old_locus_tag=YPN_3712 NC_008149.1 Protein Homology CDS 4260360 4260716 . - 0 ID=cds3800;Parent=gene3899;Dbxref=Genbank:WP_002209618.1;Name=WP_002209618.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209618.1;transl_table=11 NC_008149.1 RefSeq gene 4260965 4261519 . - . ID=gene3900;Name=YPN_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19530;old_locus_tag=YPN_3713 NC_008149.1 Protein Homology CDS 4260965 4261519 . - 0 ID=cds3801;Parent=gene3900;Dbxref=Genbank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;product=mannitol repressor protein;protein_id=WP_002209619.1;transl_table=11 NC_008149.1 RefSeq gene 4261726 4262889 . - . ID=gene3901;Name=YPN_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19535;old_locus_tag=YPN_3714 NC_008149.1 Protein Homology CDS 4261726 4262889 . - 0 ID=cds3802;Parent=gene3901;Dbxref=Genbank:WP_002209620.1;Name=WP_002209620.1;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_002209620.1;transl_table=11 NC_008149.1 RefSeq gene 4263026 4264957 . - . ID=gene3902;Name=YPN_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19540;old_locus_tag=YPN_3715 NC_008149.1 Protein Homology CDS 4263026 4264957 . - 0 ID=cds3803;Parent=gene3902;Dbxref=Genbank:WP_002209621.1;Name=WP_002209621.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannitol transporter subunit IIABC;protein_id=WP_002209621.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4265399 4265573 . + . ID=id353;gbkey=repeat_region NC_008149.1 RefSeq gene 4265607 4266326 . - . ID=gene3903;Name=YPN_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19545;old_locus_tag=YPN_3716 NC_008149.1 Protein Homology CDS 4265607 4266326 . - 0 ID=cds3804;Parent=gene3903;Dbxref=Genbank:WP_002209622.1;Name=WP_002209622.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209622.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4266578 4266752 . + . ID=id354;gbkey=repeat_region NC_008149.1 RefSeq gene 4266799 4268868 . - . ID=gene3904;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=YPN_RS19550;old_locus_tag=YPN_3717 NC_008149.1 Protein Homology CDS 4266799 4268868 . - 0 ID=cds3805;Parent=gene3904;Dbxref=Genbank:WP_002209623.1;Name=WP_002209623.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11 NC_008149.1 RefSeq gene 4268878 4269792 . - . ID=gene3905;Name=YPN_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19555;old_locus_tag=YPN_3718 NC_008149.1 Protein Homology CDS 4268878 4269792 . - 0 ID=cds3806;Parent=gene3905;Dbxref=Genbank:WP_002209624.1;Name=WP_002209624.1;gbkey=CDS;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11 NC_008149.1 RefSeq gene 4270120 4270692 . + . ID=gene3906;Name=YPN_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19560;old_locus_tag=YPN_3719 NC_008149.1 Protein Homology CDS 4270120 4270692 . + 0 ID=cds3807;Parent=gene3906;Dbxref=Genbank:WP_002223790.1;Name=WP_002223790.1;gbkey=CDS;product=3-methyladenine DNA glycosylase;protein_id=WP_002223790.1;transl_table=11 NC_008149.1 RefSeq gene 4270689 4271144 . + . ID=gene3907;Name=YPN_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19565;old_locus_tag=YPN_3720 NC_008149.1 Protein Homology CDS 4270689 4271144 . + 0 ID=cds3808;Parent=gene3907;Dbxref=Genbank:WP_002209627.1;Name=WP_002209627.1;gbkey=CDS;product=acetyltransferase;protein_id=WP_002209627.1;transl_table=11 NC_008149.1 RefSeq gene 4271502 4272161 . + . ID=gene3908;Name=YPN_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19570;old_locus_tag=YPN_3721 NC_008149.1 Protein Homology CDS 4271502 4272161 . + 0 ID=cds3809;Parent=gene3908;Dbxref=Genbank:WP_002209628.1;Name=WP_002209628.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209628.1;transl_table=11 NC_008149.1 RefSeq gene 4272292 4272936 . - . ID=gene3909;Name=YPN_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19575;old_locus_tag=YPN_3722 NC_008149.1 Protein Homology CDS 4272292 4272936 . - 0 ID=cds3810;Parent=gene3909;Dbxref=Genbank:WP_002209629.1;Name=WP_002209629.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002209629.1;transl_table=11 NC_008149.1 RefSeq gene 4273455 4274435 . + . ID=gene3910;Name=YPN_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19580;old_locus_tag=YPN_3723 NC_008149.1 Protein Homology CDS 4273455 4274435 . + 0 ID=cds3811;Parent=gene3910;Dbxref=Genbank:WP_002223788.1;Name=WP_002223788.1;Note=catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate;gbkey=CDS;product=glyoxylate/hydroxypyruvate reductase B;protein_id=WP_002223788.1;transl_table=11 NC_008149.1 RefSeq gene 4274724 4276787 . + . ID=gene3911;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=YPN_RS19585;old_locus_tag=YPN_3724 NC_008149.1 Protein Homology CDS 4274724 4276787 . + 0 ID=cds3812;Parent=gene3911;Dbxref=Genbank:WP_002209631.1;Name=WP_002209631.1;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds;gbkey=CDS;gene=malS;product=alpha-amylase;protein_id=WP_002209631.1;transl_table=11 NC_008149.1 RefSeq gene 4277202 4277645 . + . ID=gene3912;Name=YPN_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19590;old_locus_tag=YPN_3725 NC_008149.1 Protein Homology CDS 4277202 4277645 . + 0 ID=cds3813;Parent=gene3912;Dbxref=Genbank:WP_002209632.1;Name=WP_002209632.1;gbkey=CDS;product=membrane protein;protein_id=WP_002209632.1;transl_table=11 NC_008149.1 RefSeq gene 4278100 4279365 . + . ID=gene3913;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=YPN_RS19595;old_locus_tag=YPN_3726 NC_008149.1 Protein Homology CDS 4278100 4279365 . + 0 ID=cds3814;Parent=gene3913;Dbxref=Genbank:WP_002228155.1;Name=WP_002228155.1;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=WP_002228155.1;transl_table=11 NC_008149.1 RefSeq gene 4279478 4281136 . - . ID=gene3914;Name=YPN_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19600;old_locus_tag=YPN_3727 NC_008149.1 Protein Homology CDS 4279478 4281136 . - 0 ID=cds3815;Parent=gene3914;Dbxref=Genbank:WP_002209634.1;Name=WP_002209634.1;gbkey=CDS;product=transporter;protein_id=WP_002209634.1;transl_table=11 NC_008149.1 RefSeq gene 4281509 4281973 . - . ID=gene3915;Name=YPN_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19605;old_locus_tag=YPN_3728 NC_008149.1 Protein Homology CDS 4281509 4281973 . - 0 ID=cds3816;Parent=gene3915;Dbxref=Genbank:WP_002209635.1;Name=WP_002209635.1;gbkey=CDS;product=heat-shock protein IbpB;protein_id=WP_002209635.1;transl_table=11 NC_008149.1 RefSeq gene 4282254 4282667 . - . ID=gene3916;Name=YPN_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19610;old_locus_tag=YPN_3729 NC_008149.1 Protein Homology CDS 4282254 4282667 . - 0 ID=cds3817;Parent=gene3916;Dbxref=Genbank:WP_002209636.1;Name=WP_002209636.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;product=heat-shock protein IbpA;protein_id=WP_002209636.1;transl_table=11 NC_008149.1 RefSeq gene 4283035 4283373 . + . ID=gene3917;Name=YPN_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19615;old_locus_tag=YPN_3730 NC_008149.1 Protein Homology CDS 4283035 4283373 . + 0 ID=cds3818;Parent=gene3917;Dbxref=Genbank:WP_002209637.1;Name=WP_002209637.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209637.1;transl_table=11 NC_008149.1 RefSeq gene 4283413 4283727 . - . ID=gene3918;Name=YPN_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19620;old_locus_tag=YPN_3731 NC_008149.1 Protein Homology CDS 4283413 4283727 . - 0 ID=cds3819;Parent=gene3918;Dbxref=Genbank:WP_002228733.1;Name=WP_002228733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228733.1;transl_table=11 NC_008149.1 RefSeq gene 4283717 4284028 . - . ID=gene3919;Name=YPN_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19625;old_locus_tag=YPN_3732 NC_008149.1 Protein Homology CDS 4283717 4284028 . - 0 ID=cds3820;Parent=gene3919;Dbxref=Genbank:WP_002228734.1;Name=WP_002228734.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228734.1;transl_table=11 NC_008149.1 RefSeq gene 4284236 4285198 . + . ID=gene3920;Name=YPN_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19630;old_locus_tag=YPN_3733 NC_008149.1 Protein Homology CDS 4284236 4285198 . + 0 ID=cds3821;Parent=gene3920;Dbxref=Genbank:WP_002209638.1;Name=WP_002209638.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209638.1;transl_table=11 NC_008149.1 RefSeq gene 4285192 4286145 . + . ID=gene3921;Name=YPN_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19635;old_locus_tag=YPN_3734 NC_008149.1 Protein Homology CDS 4285192 4286145 . + 0 ID=cds3822;Parent=gene3921;Dbxref=Genbank:WP_002209639.1;Name=WP_002209639.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;product=ornithine cyclodeaminase;protein_id=WP_002209639.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4286184 4287851 . + . ID=id355;gbkey=repeat_region NC_008149.1 RefSeq gene 4286352 4286867 . + . ID=gene3922;Name=YPN_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19640;old_locus_tag=YPN_3735 NC_008149.1 Protein Homology CDS 4286352 4286867 . + 0 ID=cds3823;Parent=gene3922;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_008149.1 RefSeq gene 4286921 4287706 . + . ID=gene3923;Name=YPN_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19645;old_locus_tag=YPN_3736 NC_008149.1 Protein Homology CDS 4286921 4287706 . + 0 ID=cds3824;Parent=gene3923;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_008149.1 RefSeq gene 4287892 4288776 . - . ID=gene3924;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=YPN_RS19650;old_locus_tag=YPN_3737 NC_008149.1 Protein Homology CDS 4287892 4288776 . - 0 ID=cds3825;Parent=gene3924;Dbxref=Genbank:WP_002208933.1;Name=WP_002208933.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=WP_002208933.1;transl_table=11 NC_008149.1 RefSeq gene 4289009 4291444 . - . ID=gene3925;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=YPN_RS19655;old_locus_tag=YPN_3738 NC_008149.1 Protein Homology CDS 4289009 4291444 . - 0 ID=cds3826;Parent=gene3925;Dbxref=Genbank:WP_002208934.1;Name=WP_002208934.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11 NC_008149.1 RefSeq gene 4291447 4292606 . - . ID=gene3926;Name=YPN_RS19660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS19660;old_locus_tag=YPN_3740;pseudo=true NC_008149.1 Protein Homology CDS 4291447 4292606 . - 0 ID=cds3827;Parent=gene3926;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cystathionine gamma-synthase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 4292984 4293301 . + . ID=gene3927;Name=YPN_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19665;old_locus_tag=YPN_3741 NC_008149.1 Protein Homology CDS 4292984 4293301 . + 0 ID=cds3828;Parent=gene3927;Dbxref=Genbank:WP_002208935.1;Name=WP_002208935.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;product=met repressor;protein_id=WP_002208935.1;transl_table=11 NC_008149.1 RefSeq gene 4293438 4293599 . - . ID=gene3928;Name=YPN_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19670 NC_008149.1 Protein Homology CDS 4293438 4293599 . - 0 ID=cds3829;Parent=gene3928;Dbxref=Genbank:WP_002216739.1;Name=WP_002216739.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216739.1;transl_table=11 NC_008149.1 RefSeq gene 4293650 4294105 . + . ID=gene3929;Name=YPN_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19675;old_locus_tag=YPN_3742 NC_008149.1 Protein Homology CDS 4293650 4294105 . + 0 ID=cds3830;Parent=gene3929;Dbxref=Genbank:WP_002208936.1;Name=WP_002208936.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208936.1;transl_table=11 NC_008149.1 RefSeq gene 4294630 4294845 . - . ID=gene3930;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=YPN_RS19680;old_locus_tag=YPN_3743 NC_008149.1 Protein Homology CDS 4294630 4294845 . - 0 ID=cds3831;Parent=gene3930;Dbxref=Genbank:WP_002216737.1;Name=WP_002216737.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11 NC_008149.1 RefSeq gene 4295088 4297286 . + . ID=gene3931;Name=YPN_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19685;old_locus_tag=YPN_3744 NC_008149.1 Protein Homology CDS 4295088 4297286 . + 0 ID=cds3832;Parent=gene3931;Dbxref=Genbank:WP_002208938.1;Name=WP_002208938.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002208938.1;transl_table=11 NC_008149.1 RefSeq gene 4297373 4297516 . + . ID=gene3932;Name=YPN_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19690 NC_008149.1 Protein Homology CDS 4297373 4297516 . + 0 ID=cds3833;Parent=gene3932;Dbxref=Genbank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_002216732.1;transl_table=11 NC_008149.1 RefSeq gene 4297639 4298667 . + . ID=gene3933;Name=YPN_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19695;old_locus_tag=YPN_3745 NC_008149.1 Protein Homology CDS 4297639 4298667 . + 0 ID=cds3834;Parent=gene3933;Dbxref=Genbank:WP_002216730.1;Name=WP_002216730.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002216730.1;transl_table=11 NC_008149.1 RefSeq gene 4298733 4299578 . + . ID=gene3934;Name=YPN_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19700;old_locus_tag=YPN_3746 NC_008149.1 Protein Homology CDS 4298733 4299578 . + 0 ID=cds3835;Parent=gene3934;Dbxref=Genbank:WP_002208941.1;Name=WP_002208941.1;gbkey=CDS;product=cell division protein FtsN;protein_id=WP_002208941.1;transl_table=11 NC_008149.1 RefSeq gene 4299678 4300202 . + . ID=gene3935;Name=YPN_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19705;old_locus_tag=YPN_3747 NC_008149.1 Protein Homology CDS 4299678 4300202 . + 0 ID=cds3836;Parent=gene3935;Dbxref=Genbank:WP_002208942.1;Name=WP_002208942.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11 NC_008149.1 RefSeq gene 4300273 4301604 . + . ID=gene3936;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=YPN_RS19710;old_locus_tag=YPN_3748 NC_008149.1 Protein Homology CDS 4300273 4301604 . + 0 ID=cds3837;Parent=gene3936;Dbxref=Genbank:WP_002208943.1;Name=WP_002208943.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_002208943.1;transl_table=11 NC_008149.1 RefSeq gene 4301840 4302757 . + . ID=gene3937;Name=YPN_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19715;old_locus_tag=YPN_3749 NC_008149.1 Protein Homology CDS 4301840 4302757 . + 0 ID=cds3838;Parent=gene3937;Dbxref=Genbank:WP_002208944.1;Name=WP_002208944.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_002208944.1;transl_table=11 NC_008149.1 RefSeq gene 4302899 4303384 . + . ID=gene3938;Name=YPN_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19720;old_locus_tag=YPN_3750 NC_008149.1 Protein Homology CDS 4302899 4303384 . + 0 ID=cds3839;Parent=gene3938;Dbxref=Genbank:WP_002208945.1;Name=WP_002208945.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;product=ribonuclease E activity regulator RraA;protein_id=WP_002208945.1;transl_table=11 NC_008149.1 RefSeq gene 4303501 4304085 . - . ID=gene3939;Name=YPN_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19725;old_locus_tag=YPN_3751 NC_008149.1 Protein Homology CDS 4303501 4304085 . - 0 ID=cds3840;Parent=gene3939;Dbxref=Genbank:WP_002228141.1;Name=WP_002228141.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228141.1;transl_table=11 NC_008149.1 RefSeq gene 4304391 4304540 . - . ID=gene3940;Name=YPN_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19730 NC_008149.1 Protein Homology CDS 4304391 4304540 . - 0 ID=cds3841;Parent=gene3940;Dbxref=Genbank:WP_002208947.1;Name=WP_002208947.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208947.1;transl_table=11 NC_008149.1 RefSeq gene 4304715 4304954 . - . ID=gene3941;Name=YPN_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19735;old_locus_tag=YPN_3752 NC_008149.1 Protein Homology CDS 4304715 4304954 . - 0 ID=cds3842;Parent=gene3941;Dbxref=Genbank:WP_002215873.1;Name=WP_002215873.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215873.1;transl_table=11 NC_008149.1 RefSeq gene 4305167 4306459 . + . ID=gene3942;Name=YPN_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19740;old_locus_tag=YPN_3753 NC_008149.1 Protein Homology CDS 4305167 4306459 . + 0 ID=cds3843;Parent=gene3942;Dbxref=Genbank:WP_002208949.1;Name=WP_002208949.1;gbkey=CDS;product=colicin V secretion protein CvaA;protein_id=WP_002208949.1;transl_table=11 NC_008149.1 RefSeq gene 4306452 4308566 . + . ID=gene3943;Name=YPN_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19745;old_locus_tag=YPN_3754 NC_008149.1 Protein Homology CDS 4306452 4308566 . + 0 ID=cds3844;Parent=gene3943;Dbxref=Genbank:WP_002223915.1;Name=WP_002223915.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002223915.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4308798 4309516 . + . ID=id356;gbkey=repeat_region NC_008149.1 RefSeq gene 4308944 4309402 . + . ID=gene3944;Name=YPN_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19750;old_locus_tag=YPN_3755 NC_008149.1 Protein Homology CDS 4308944 4309402 . + 0 ID=cds3845;Parent=gene3944;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008149.1 RefSeq gene 4309610 4309849 . - . ID=gene3945;Name=YPN_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19755;old_locus_tag=YPN_3756 NC_008149.1 Protein Homology CDS 4309610 4309849 . - 0 ID=cds3846;Parent=gene3945;Dbxref=Genbank:WP_002208953.1;Name=WP_002208953.1;Note=interacts with FisZ and is necessary for Z-ring formation;gbkey=CDS;product=cell division protein ZapB;protein_id=WP_002208953.1;transl_table=11 NC_008149.1 RefSeq gene 4310228 4310467 . + . ID=gene3946;Name=YPN_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19760 NC_008149.1 Protein Homology CDS 4310228 4310467 . + 0 ID=cds3847;Parent=gene3946;Dbxref=Genbank:WP_002215868.1;Name=WP_002215868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215868.1;transl_table=11 NC_008149.1 RefSeq gene 4310477 4311325 . + . ID=gene3947;Name=YPN_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19765;old_locus_tag=YPN_3757 NC_008149.1 Protein Homology CDS 4310477 4311325 . + 0 ID=cds3848;Parent=gene3947;Dbxref=Genbank:WP_002208954.1;Name=WP_002208954.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=WP_002208954.1;transl_table=11 NC_008149.1 RefSeq gene 4311502 4313025 . + . ID=gene3948;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=YPN_RS19770;old_locus_tag=YPN_3758 NC_008149.1 Protein Homology CDS 4311502 4313025 . + 0 ID=cds3849;Parent=gene3948;Dbxref=Genbank:WP_002218876.1;Name=WP_002218876.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=WP_002218876.1;transl_table=11 NC_008149.1 RefSeq gene 4313262 4314272 . + . ID=gene3949;Name=YPN_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19775;old_locus_tag=YPN_3759 NC_008149.1 Protein Homology CDS 4313262 4314272 . + 0 ID=cds3850;Parent=gene3949;Dbxref=Genbank:WP_002223912.1;Name=WP_002223912.1;gbkey=CDS;product=fructose 1%2C6-bisphosphatase;protein_id=WP_002223912.1;transl_table=11 NC_008149.1 RefSeq gene 4314427 4315173 . + . ID=gene3950;Name=YPN_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19780;old_locus_tag=YPN_3760 NC_008149.1 Protein Homology CDS 4314427 4315173 . + 0 ID=cds3851;Parent=gene3950;Dbxref=Genbank:WP_002208956.1;Name=WP_002208956.1;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=WP_002208956.1;transl_table=11 NC_008149.1 RefSeq gene 4315514 4315948 . - . ID=gene3951;Name=YPN_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19785;old_locus_tag=YPN_3761 NC_008149.1 Protein Homology CDS 4315514 4315948 . - 0 ID=cds3852;Parent=gene3951;Dbxref=Genbank:WP_002208957.1;Name=WP_002208957.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208957.1;transl_table=11 NC_008149.1 RefSeq gene 4316096 4316731 . + . ID=gene3952;Name=YPN_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19790;old_locus_tag=YPN_3762 NC_008149.1 Protein Homology CDS 4316096 4316731 . + 0 ID=cds3853;Parent=gene3952;Dbxref=Genbank:WP_002223910.1;Name=WP_002223910.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002223910.1;transl_table=11 NC_008149.1 RefSeq gene 4316860 4317627 . + . ID=gene3953;Name=YPN_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19795;old_locus_tag=YPN_3763 NC_008149.1 Protein Homology CDS 4316860 4317627 . + 0 ID=cds3854;Parent=gene3953;Dbxref=Genbank:WP_002208959.1;Name=WP_002208959.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_002208959.1;transl_table=11 NC_008149.1 RefSeq gene 4317859 4319094 . - . ID=gene3954;Name=YPN_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19800;old_locus_tag=YPN_3764 NC_008149.1 Protein Homology CDS 4317859 4319094 . - 0 ID=cds3855;Parent=gene3954;Dbxref=Genbank:WP_002208960.1;Name=WP_002208960.1;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=WP_002208960.1;transl_table=11 NC_008149.1 RefSeq gene 4319231 4319968 . + . ID=gene3955;Name=YPN_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19805;old_locus_tag=YPN_3765 NC_008149.1 Protein Homology CDS 4319231 4319968 . + 0 ID=cds3856;Parent=gene3955;Dbxref=Genbank:WP_002208961.1;Name=WP_002208961.1;gbkey=CDS;product=GlcNAc-PI de-N-acetylase;protein_id=WP_002208961.1;transl_table=11 NC_008149.1 RefSeq gene 4319965 4320678 . + . ID=gene3956;Name=YPN_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19810;old_locus_tag=YPN_3766 NC_008149.1 Protein Homology CDS 4319965 4320678 . + 0 ID=cds3857;Parent=gene3956;Dbxref=Genbank:WP_002208962.1;Name=WP_002208962.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208962.1;transl_table=11 NC_008149.1 RefSeq gene 4320744 4322171 . + . ID=gene3957;Name=YPN_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19815;old_locus_tag=YPN_3767 NC_008149.1 Protein Homology CDS 4320744 4322171 . + 0 ID=cds3858;Parent=gene3957;Dbxref=Genbank:WP_002208963.1;Name=WP_002208963.1;gbkey=CDS;product=membrane protein;protein_id=WP_002208963.1;transl_table=11 NC_008149.1 RefSeq gene 4322406 4323065 . + . ID=gene3958;Name=YPN_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19820;old_locus_tag=YPN_3768 NC_008149.1 Protein Homology CDS 4322406 4323065 . + 0 ID=cds3859;Parent=gene3958;Dbxref=Genbank:WP_025473238.1;Name=WP_025473238.1;gbkey=CDS;product=molybdenum ABC transporter substrate-binding protein;protein_id=WP_025473238.1;transl_table=11 NC_008149.1 RefSeq gene 4323315 4324304 . - . ID=gene3959;Name=YPN_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19825;old_locus_tag=YPN_3769 NC_008149.1 Protein Homology CDS 4323315 4324304 . - 0 ID=cds3860;Parent=gene3959;Dbxref=Genbank:WP_002208965.1;Name=WP_002208965.1;gbkey=CDS;product=sulfate transporter subunit;protein_id=WP_002208965.1;transl_table=11 NC_008149.1 RefSeq gene 4324525 4325508 . - . ID=gene3960;Name=YPN_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19830;old_locus_tag=YPN_3770 NC_008149.1 Protein Homology CDS 4324525 4325508 . - 0 ID=cds3861;Parent=gene3960;Dbxref=Genbank:WP_002208966.1;Name=WP_002208966.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_002208966.1;transl_table=11 NC_008149.1 RefSeq gene 4325726 4326628 . - . ID=gene3961;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=YPN_RS19835;old_locus_tag=YPN_3771 NC_008149.1 Protein Homology CDS 4325726 4326628 . - 0 ID=cds3862;Parent=gene3961;Dbxref=Genbank:WP_002208967.1;Name=WP_002208967.1;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;gbkey=CDS;gene=fieF;product=cation-efflux pump FieF;protein_id=WP_002208967.1;transl_table=11 NC_008149.1 RefSeq gene 4327190 4328149 . - . ID=gene3962;Name=YPN_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19840;old_locus_tag=YPN_3773 NC_008149.1 Protein Homology CDS 4327190 4328149 . - 0 ID=cds3863;Parent=gene3962;Dbxref=Genbank:WP_002208968.1;Name=WP_002208968.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208968.1;transl_table=11 NC_008149.1 RefSeq gene 4328827 4329315 . - . ID=gene3963;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=YPN_RS19845;old_locus_tag=YPN_3776 NC_008149.1 Protein Homology CDS 4328827 4329315 . - 0 ID=cds3864;Parent=gene3963;Dbxref=Genbank:WP_002208969.1;Name=WP_002208969.1;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=universal stress protein;protein_id=WP_002208969.1;transl_table=11 NC_008149.1 RefSeq gene 4329489 4330187 . + . ID=gene3964;Name=YPN_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19850;old_locus_tag=YPN_3777 NC_008149.1 Protein Homology CDS 4329489 4330187 . + 0 ID=cds3865;Parent=gene3964;Dbxref=Genbank:WP_002208970.1;Name=WP_002208970.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;product=two-component system response regulator;protein_id=WP_002208970.1;transl_table=11 NC_008149.1 RefSeq gene 4330184 4331560 . + . ID=gene3965;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=YPN_RS19855;old_locus_tag=YPN_3778 NC_008149.1 Protein Homology CDS 4330184 4331560 . + 0 ID=cds3866;Parent=gene3965;Dbxref=Genbank:WP_002208971.1;Name=WP_002208971.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component system sensor histidine kinase;protein_id=WP_002208971.1;transl_table=11 NC_008149.1 RefSeq gene 4331609 4332673 . - . ID=gene3966;Name=YPN_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19860;old_locus_tag=YPN_3779 NC_008149.1 Protein Homology CDS 4331609 4332673 . - 0 ID=cds3867;Parent=gene3966;Dbxref=Genbank:WP_002208972.1;Name=WP_002208972.1;Note=regulates genes involved in the repair of alkylated DNA%3B repairs DNA containing 6-O-methylguanine;gbkey=CDS;product=O6-methylguanine-DNA methyltransferase;protein_id=WP_002208972.1;transl_table=11 NC_008149.1 RefSeq gene 4332862 4333350 . + . ID=gene3967;Name=YPN_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19865;old_locus_tag=YPN_3780 NC_008149.1 Protein Homology CDS 4332862 4333350 . + 0 ID=cds3868;Parent=gene3967;Dbxref=Genbank:WP_002208973.1;Name=WP_002208973.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_002208973.1;transl_table=11 NC_008149.1 RefSeq gene 4333473 4334294 . - . ID=gene3968;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=YPN_RS19870;old_locus_tag=YPN_3781 NC_008149.1 Protein Homology CDS 4333473 4334294 . - 0 ID=cds3869;Parent=gene3968;Dbxref=Genbank:WP_002208974.1;Name=WP_002208974.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=WP_002208974.1;transl_table=11 NC_008149.1 RefSeq gene 4334360 4334500 . - . ID=gene3969;Name=YPN_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19875 NC_008149.1 Protein Homology CDS 4334360 4334500 . - 0 ID=cds3870;Parent=gene3969;Dbxref=Genbank:WP_002228146.1;Name=WP_002228146.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228146.1;transl_table=11 NC_008149.1 RefSeq gene 4334560 4335579 . - . ID=gene3970;Name=YPN_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19880;old_locus_tag=YPN_3782 NC_008149.1 Protein Homology CDS 4334560 4335579 . - 0 ID=cds3871;Parent=gene3970;Dbxref=Genbank:WP_002208975.1;Name=WP_002208975.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+];protein_id=WP_002208975.1;transl_table=11 NC_008149.1 RefSeq gene 4335579 4336055 . - . ID=gene3971;Name=YPN_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19885;old_locus_tag=YPN_3783 NC_008149.1 Protein Homology CDS 4335579 4336055 . - 0 ID=cds3872;Parent=gene3971;Dbxref=Genbank:WP_002208976.1;Name=WP_002208976.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;product=protein-export protein SecB;protein_id=WP_002208976.1;transl_table=11 NC_008149.1 RefSeq gene 4336143 4336391 . - . ID=gene3972;Name=YPN_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19890;old_locus_tag=YPN_3784 NC_008149.1 Protein Homology CDS 4336143 4336391 . - 0 ID=cds3873;Parent=gene3972;Dbxref=Genbank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_002208977.1;transl_table=11 NC_008149.1 RefSeq gene 4336510 4336944 . - . ID=gene3973;Name=YPN_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19895;old_locus_tag=YPN_3785 NC_008149.1 Protein Homology CDS 4336510 4336944 . - 0 ID=cds3874;Parent=gene3973;Dbxref=Genbank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208978.1;transl_table=11 NC_008149.1 RefSeq gene 4337341 4338888 . + . ID=gene3974;Name=YPN_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19900;old_locus_tag=YPN_3786 NC_008149.1 Protein Homology CDS 4337341 4338888 . + 0 ID=cds3875;Parent=gene3974;Dbxref=Genbank:WP_002208979.1;Name=WP_002208979.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_002208979.1;transl_table=11 NC_008149.1 RefSeq gene 4338898 4340268 . + . ID=gene3975;Name=YPN_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19905;old_locus_tag=YPN_3787 NC_008149.1 Protein Homology CDS 4338898 4340268 . + 0 ID=cds3876;Parent=gene3975;Dbxref=Genbank:WP_002208980.1;Name=WP_002208980.1;gbkey=CDS;product=peptidase M37;protein_id=WP_002208980.1;transl_table=11 NC_008149.1 RefSeq gene 4340292 4341226 . + . ID=gene3976;Name=YPN_RS19910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS19910;pseudo=true NC_008149.1 Protein Homology CDS 4340292 4341226 . + 0 ID=cds3877;Parent=gene3976;exception=annotated by transcript or proteomic data;gbkey=CDS;product=sugar deacetylase;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 4341364 4342389 . - . ID=gene3977;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=YPN_RS19915;old_locus_tag=YPN_3790 NC_008149.1 Protein Homology CDS 4341364 4342389 . - 0 ID=cds3878;Parent=gene3977;Dbxref=Genbank:WP_002208981.1;Name=WP_002208981.1;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=WP_002208981.1;transl_table=11 NC_008149.1 RefSeq gene 4342399 4343610 . - . ID=gene3978;Name=YPN_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19920;old_locus_tag=YPN_3791 NC_008149.1 Protein Homology CDS 4342399 4343610 . - 0 ID=cds3879;Parent=gene3978;Dbxref=Genbank:WP_002208982.1;Name=WP_002208982.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=WP_002208982.1;transl_table=11 NC_008149.1 RefSeq gene 4343856 4344788 . + . ID=gene3979;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=YPN_RS19925;old_locus_tag=YPN_3792 NC_008149.1 Protein Homology CDS 4343856 4344788 . + 0 ID=cds3880;Parent=gene3979;Dbxref=Genbank:WP_002208983.1;Name=WP_002208983.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=WP_002208983.1;transl_table=11 NC_008149.1 RefSeq gene 4344819 4345883 . + . ID=gene3980;Name=YPN_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19930;old_locus_tag=YPN_3793 NC_008149.1 Protein Homology CDS 4344819 4345883 . + 0 ID=cds3881;Parent=gene3980;Dbxref=Genbank:WP_002208984.1;Name=WP_002208984.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208984.1;transl_table=11 NC_008149.1 RefSeq gene 4345883 4346848 . + . ID=gene3981;Name=YPN_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19935;old_locus_tag=YPN_3794 NC_008149.1 Protein Homology CDS 4345883 4346848 . + 0 ID=cds3882;Parent=gene3981;Dbxref=Genbank:WP_002208985.1;Name=WP_002208985.1;gbkey=CDS;product=ADP-heptose--LPS heptosyl transferase;protein_id=WP_002208985.1;transl_table=11 NC_008149.1 RefSeq gene 4347268 4348545 . + . ID=gene3982;Name=YPN_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19940;old_locus_tag=YPN_3795 NC_008149.1 Protein Homology CDS 4347268 4348545 . + 0 ID=cds3883;Parent=gene3982;Dbxref=Genbank:WP_002208986.1;Name=WP_002208986.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002208986.1;transl_table=11 NC_008149.1 RefSeq gene 4348546 4349328 . + . ID=gene3983;Name=YPN_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19945;old_locus_tag=YPN_3796 NC_008149.1 Protein Homology CDS 4348546 4349328 . + 0 ID=cds3884;Parent=gene3983;Dbxref=Genbank:WP_002208987.1;Name=WP_002208987.1;gbkey=CDS;product=LPS biosynthesis protein;protein_id=WP_002208987.1;transl_table=11 NC_008149.1 RefSeq gene 4349325 4349804 . + . ID=gene3984;Name=YPN_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19950;old_locus_tag=YPN_3797 NC_008149.1 Protein Homology CDS 4349325 4349804 . + 0 ID=cds3885;Parent=gene3984;Dbxref=Genbank:WP_002208988.1;Name=WP_002208988.1;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=WP_002208988.1;transl_table=11 NC_008149.1 RefSeq gene 4349810 4350619 . - . ID=gene3985;Name=YPN_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19955;old_locus_tag=YPN_3798 NC_008149.1 Protein Homology CDS 4349810 4350619 . - 0 ID=cds3886;Parent=gene3985;Dbxref=Genbank:WP_002208989.1;Name=WP_002208989.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=WP_002208989.1;transl_table=11 NC_008149.1 RefSeq gene 4350702 4350869 . - . ID=gene3986;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=YPN_RS19960;old_locus_tag=YPN_3799 NC_008149.1 Protein Homology CDS 4350702 4350869 . - 0 ID=cds3887;Parent=gene3986;Dbxref=Genbank:WP_002208990.1;Name=WP_002208990.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11 NC_008149.1 RefSeq gene 4350881 4351117 . - . ID=gene3987;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=YPN_RS19965;old_locus_tag=YPN_3800 NC_008149.1 Protein Homology CDS 4350881 4351117 . - 0 ID=cds3888;Parent=gene3987;Dbxref=Genbank:WP_002208991.1;Name=WP_002208991.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11 NC_008149.1 RefSeq gene 4351380 4352048 . - . ID=gene3988;Name=YPN_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19970;old_locus_tag=YPN_3801 NC_008149.1 Protein Homology CDS 4351380 4352048 . - 0 ID=cds3889;Parent=gene3988;Dbxref=Genbank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;product=DNA repair protein RadC;protein_id=WP_002208992.1;transl_table=11 NC_008149.1 RefSeq gene 4352242 4353459 . + . ID=gene3989;Name=YPN_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19975;old_locus_tag=YPN_3802 NC_008149.1 Protein Homology CDS 4352242 4353459 . + 0 ID=cds3890;Parent=gene3989;Dbxref=Genbank:WP_002208993.1;Name=WP_002208993.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_002208993.1;transl_table=11 NC_008149.1 RefSeq gene 4353437 4353895 . + . ID=gene3990;Name=YPN_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS19980;old_locus_tag=YPN_3803 NC_008149.1 Protein Homology CDS 4353437 4353895 . + 0 ID=cds3891;Parent=gene3990;Dbxref=Genbank:WP_011566231.1;Name=WP_011566231.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_011566231.1;transl_table=11 NC_008149.1 RefSeq gene 4354017 4354613 . + . ID=gene3991;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=YPN_RS19985;old_locus_tag=YPN_3804 NC_008149.1 Protein Homology CDS 4354017 4354613 . + 0 ID=cds3892;Parent=gene3991;Dbxref=Genbank:WP_002208995.1;Name=WP_002208995.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion factor SlmA;protein_id=WP_002208995.1;transl_table=11 NC_008149.1 RefSeq gene 4354748 4355395 . - . ID=gene3992;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=YPN_RS19990;old_locus_tag=YPN_3805 NC_008149.1 Protein Homology CDS 4354748 4355395 . - 0 ID=cds3893;Parent=gene3992;Dbxref=Genbank:WP_002208996.1;Name=WP_002208996.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_002208996.1;transl_table=11 NC_008149.1 RefSeq gene 4355562 4356278 . - . ID=gene3993;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=YPN_RS19995;old_locus_tag=YPN_3806 NC_008149.1 Protein Homology CDS 4355562 4356278 . - 0 ID=cds3894;Parent=gene3993;Dbxref=Genbank:WP_002208997.1;Name=WP_002208997.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11 NC_008149.1 RefSeq gene 4356405 4357268 . + . ID=gene3994;Name=YPN_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20000;old_locus_tag=YPN_3807 NC_008149.1 Protein Homology CDS 4356405 4357268 . + 0 ID=cds3895;Parent=gene3994;Dbxref=Genbank:WP_002208998.1;Name=WP_002208998.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208998.1;transl_table=11 NC_008149.1 RefSeq gene 4357671 4358294 . + . ID=gene3995;Name=YPN_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20005;old_locus_tag=YPN_3808 NC_008149.1 Protein Homology CDS 4357671 4358294 . + 0 ID=cds3896;Parent=gene3995;Dbxref=Genbank:WP_002215676.1;Name=WP_002215676.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215676.1;transl_table=11 NC_008149.1 RefSeq gene 4358307 4360010 . - . ID=gene3996;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;gene_synonym=yicF;locus_tag=YPN_RS20010;old_locus_tag=YPN_3809 NC_008149.1 Protein Homology CDS 4358307 4360010 . - 0 ID=cds3897;Parent=gene3996;Dbxref=Genbank:WP_002215674.1;Name=WP_002215674.1;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+;gbkey=CDS;gene=ligB;product=DNA ligase B;protein_id=WP_002215674.1;transl_table=11 NC_008149.1 RefSeq gene 4360411 4361034 . + . ID=gene3997;Name=YPN_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20015;old_locus_tag=YPN_3810 NC_008149.1 Protein Homology CDS 4360411 4361034 . + 0 ID=cds3898;Parent=gene3997;Dbxref=Genbank:WP_002209000.1;Name=WP_002209000.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11 NC_008149.1 RefSeq gene 4361089 4361364 . + . ID=gene3998;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=YPN_RS20020;old_locus_tag=YPN_3811 NC_008149.1 Protein Homology CDS 4361089 4361364 . + 0 ID=cds3899;Parent=gene3998;Dbxref=Genbank:WP_002209001.1;Name=WP_002209001.1;Note=Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_002209001.1;transl_table=11 NC_008149.1 RefSeq gene 4361384 4363492 . + . ID=gene3999;Name=YPN_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20025;old_locus_tag=YPN_3812 NC_008149.1 Protein Homology CDS 4361384 4363492 . + 0 ID=cds3900;Parent=gene3999;Dbxref=Genbank:WP_002209002.1;Name=WP_002209002.1;gbkey=CDS;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_002209002.1;transl_table=11 NC_008149.1 RefSeq gene 4363531 4364190 . + . ID=gene4000;Name=YPN_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20030;old_locus_tag=YPN_3813 NC_008149.1 Protein Homology CDS 4363531 4364190 . + 0 ID=cds3901;Parent=gene4000;Dbxref=Genbank:WP_002361605.1;Name=WP_002361605.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;product=tRNA methyltransferase;protein_id=WP_002361605.1;transl_table=11 NC_008149.1 RefSeq gene 4364191 4366272 . + . ID=gene4001;Name=YPN_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20035;old_locus_tag=YPN_3814 NC_008149.1 Protein Homology CDS 4364191 4366272 . + 0 ID=cds3902;Parent=gene4001;Dbxref=Genbank:WP_002209004.1;Name=WP_002209004.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_002209004.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4366361 4366540 . + . ID=id357;gbkey=repeat_region NC_008149.1 RefSeq gene 4366638 4367852 . - . ID=gene4002;Name=YPN_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20040;old_locus_tag=YPN_3815 NC_008149.1 Protein Homology CDS 4366638 4367852 . - 0 ID=cds3903;Parent=gene4002;Dbxref=Genbank:WP_002209005.1;Name=WP_002209005.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;product=sodium/glutamate symport carrier protein GltS;protein_id=WP_002209005.1;transl_table=11 NC_008149.1 RefSeq gene 4368090 4369475 . + . ID=gene4003;Name=YPN_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20045;old_locus_tag=YPN_3816 NC_008149.1 Protein Homology CDS 4368090 4369475 . + 0 ID=cds3904;Parent=gene4003;Dbxref=Genbank:WP_002209006.1;Name=WP_002209006.1;Note=high-affinity transporter for xanthine;gbkey=CDS;product=xanthine permease;protein_id=WP_002209006.1;transl_table=11 NC_008149.1 RefSeq gene 4369623 4371332 . + . ID=gene4004;Name=YPN_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20050;old_locus_tag=YPN_3817 NC_008149.1 Protein Homology CDS 4369623 4371332 . + 0 ID=cds3905;Parent=gene4004;Dbxref=Genbank:WP_002209007.1;Name=WP_002209007.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209007.1;transl_table=11 NC_008149.1 RefSeq gene 4371467 4372390 . - . ID=gene4005;Name=YPN_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20055;old_locus_tag=YPN_3818 NC_008149.1 Protein Homology CDS 4371467 4372390 . - 0 ID=cds3906;Parent=gene4005;Dbxref=Genbank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209008.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4372572 4374530 . + . ID=id358;gbkey=repeat_region NC_008149.1 RefSeq gene 4372660 4373682 . + . ID=gene4006;Name=YPN_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20060;old_locus_tag=YPN_3819 NC_008149.1 Protein Homology CDS 4372660 4373682 . + 0 ID=cds3907;Parent=gene4006;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008149.1 RefSeq gene 4373682 4374461 . + . ID=gene4007;Name=YPN_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20065;old_locus_tag=YPN_3820 NC_008149.1 Protein Homology CDS 4373682 4374461 . + 0 ID=cds3908;Parent=gene4007;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 4374573 4375058 . + . ID=gene4008;Name=YPN_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20070;old_locus_tag=YPN_3821 NC_008149.1 Protein Homology CDS 4374573 4375058 . + 0 ID=cds3909;Parent=gene4008;Dbxref=Genbank:WP_002215709.1;Name=WP_002215709.1;gbkey=CDS;product=carbonic anhydrase;protein_id=WP_002215709.1;transl_table=11 NC_008149.1 RefSeq gene 4375113 4375934 . - . ID=gene4009;Name=YPN_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20075;old_locus_tag=YPN_3822 NC_008149.1 Protein Homology CDS 4375113 4375934 . - 0 ID=cds3910;Parent=gene4009;Dbxref=Genbank:WP_002209026.1;Name=WP_002209026.1;gbkey=CDS;product=shikimate dehydrogenase (NADP+);protein_id=WP_002209026.1;transl_table=11 NC_008149.1 RefSeq gene 4375943 4376515 . - . ID=gene4010;Name=YPN_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20080;old_locus_tag=YPN_3823 NC_008149.1 Protein Homology CDS 4375943 4376515 . - 0 ID=cds3911;Parent=gene4010;Dbxref=Genbank:WP_002209025.1;Name=WP_002209025.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=threonylcarbamoyl-AMP synthase;protein_id=WP_002209025.1;transl_table=11 NC_008149.1 RefSeq gene 4376517 4377056 . - . ID=gene4011;Name=YPN_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20085;old_locus_tag=YPN_3824 NC_008149.1 Protein Homology CDS 4376517 4377056 . - 0 ID=cds3912;Parent=gene4011;Dbxref=Genbank:WP_002228134.1;Name=WP_002228134.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228134.1;transl_table=11 NC_008149.1 RefSeq gene 4377097 4377570 . - . ID=gene4012;Name=YPN_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20090;old_locus_tag=YPN_3825 NC_008149.1 Protein Homology CDS 4377097 4377570 . - 0 ID=cds3913;Parent=gene4012;Dbxref=Genbank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;product=protein Smg;protein_id=WP_002209023.1;transl_table=11 NC_008149.1 RefSeq gene 4377542 4378663 . - . ID=gene4013;Name=YPN_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20095;old_locus_tag=YPN_3826 NC_008149.1 Protein Homology CDS 4377542 4378663 . - 0 ID=cds3914;Parent=gene4013;Dbxref=Genbank:WP_002209022.1;Name=WP_002209022.1;gbkey=CDS;product=DNA processing protein DprA;protein_id=WP_002209022.1;transl_table=11 NC_008149.1 RefSeq gene 4378798 4379310 . + . ID=gene4014;Name=YPN_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20100;old_locus_tag=YPN_3827 NC_008149.1 Protein Homology CDS 4378798 4379310 . + 0 ID=cds3915;Parent=gene4014;Dbxref=Genbank:WP_002209021.1;Name=WP_002209021.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11 NC_008149.1 RefSeq gene 4379335 4380282 . + . ID=gene4015;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=YPN_RS20105;old_locus_tag=YPN_3828 NC_008149.1 Protein Homology CDS 4379335 4380282 . + 0 ID=cds3916;Parent=gene4015;Dbxref=Genbank:WP_002209020.1;Name=WP_002209020.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_002209020.1;transl_table=11 NC_008149.1 RefSeq gene 4380376 4381665 . + . ID=gene4016;Name=YPN_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20110;old_locus_tag=YPN_3829 NC_008149.1 Protein Homology CDS 4380376 4381665 . + 0 ID=cds3917;Parent=gene4016;Dbxref=Genbank:WP_002215705.1;Name=WP_002215705.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;product=ribosomal RNA small subunit methyltransferase B;protein_id=WP_002215705.1;transl_table=11 NC_008149.1 RefSeq gene 4381721 4383097 . + . ID=gene4017;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=YPN_RS20115;old_locus_tag=YPN_3830 NC_008149.1 Protein Homology CDS 4381721 4383097 . + 0 ID=cds3918;Parent=gene4017;Dbxref=Genbank:WP_002209018.1;Name=WP_002209018.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=WP_002209018.1;transl_table=11 NC_008149.1 RefSeq gene 4383236 4383649 . + . ID=gene4018;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=YPN_RS20120;old_locus_tag=YPN_3831 NC_008149.1 Protein Homology CDS 4383236 4383649 . + 0 ID=cds3919;Parent=gene4018;Dbxref=Genbank:WP_002209017.1;Name=WP_002209017.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;product=large-conductance mechanosensitive channel;protein_id=WP_002209017.1;transl_table=11 NC_008149.1 RefSeq gene 4383759 4383959 . - . ID=gene4019;Name=YPN_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20125;old_locus_tag=YPN_3832 NC_008149.1 Protein Homology CDS 4383759 4383959 . - 0 ID=cds3920;Parent=gene4019;Dbxref=Genbank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002209016.1;transl_table=11 NC_008149.1 RefSeq gene 4384047 4384472 . - . ID=gene4020;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=YPN_RS20130;old_locus_tag=YPN_3833 NC_008149.1 Protein Homology CDS 4384047 4384472 . - 0 ID=cds3921;Parent=gene4020;Dbxref=Genbank:WP_002215702.1;Name=WP_002215702.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=Zn(II)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11 NC_008149.1 RefSeq gene 4384919 4385308 . - . ID=gene4021;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=YPN_RS20135;old_locus_tag=YPN_3834 NC_008149.1 Protein Homology CDS 4384919 4385308 . - 0 ID=cds3922;Parent=gene4021;Dbxref=Genbank:WP_002209014.1;Name=WP_002209014.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11 NC_008149.1 RefSeq gene 4385349 4386338 . - . ID=gene4022;Name=YPN_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20140;old_locus_tag=YPN_3835 NC_008149.1 Protein Homology CDS 4385349 4386338 . - 0 ID=cds3923;Parent=gene4022;Dbxref=Genbank:WP_002209013.1;Name=WP_002209013.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11 NC_008149.1 RefSeq gene 4386364 4386984 . - . ID=gene4023;Name=YPN_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20145;old_locus_tag=YPN_3836 NC_008149.1 Protein Homology CDS 4386364 4386984 . - 0 ID=cds3924;Parent=gene4023;Dbxref=Genbank:WP_002218949.1;Name=WP_002218949.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_002218949.1;transl_table=11 NC_008149.1 RefSeq gene 4387015 4387404 . - . ID=gene4024;Name=YPN_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20150;old_locus_tag=YPN_3837 NC_008149.1 Protein Homology CDS 4387015 4387404 . - 0 ID=cds3925;Parent=gene4024;Dbxref=Genbank:WP_002218948.1;Name=WP_002218948.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_002218948.1;transl_table=11 NC_008149.1 RefSeq gene 4387421 4387777 . - . ID=gene4025;Name=YPN_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20155;old_locus_tag=YPN_3838 NC_008149.1 Protein Homology CDS 4387421 4387777 . - 0 ID=cds3926;Parent=gene4025;Dbxref=Genbank:WP_002213346.1;Name=WP_002213346.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11 NC_008149.1 RefSeq gene 4387925 4388041 . - . ID=gene4026;Name=YPN_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20160 NC_008149.1 Protein Homology CDS 4387925 4388041 . - 0 ID=cds3927;Parent=gene4026;Dbxref=Genbank:WP_002227352.1;Name=WP_002227352.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NC_008149.1 RefSeq gene 4388075 4389406 . - . ID=gene4027;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=YPN_RS20165;old_locus_tag=YPN_3839 NC_008149.1 Protein Homology CDS 4388075 4389406 . - 0 ID=cds3928;Parent=gene4027;Dbxref=Genbank:WP_002213344.1;Name=WP_002213344.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_002213344.1;transl_table=11 NC_008149.1 RefSeq gene 4389414 4389848 . - . ID=gene4028;Name=YPN_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20170;old_locus_tag=YPN_3840 NC_008149.1 Protein Homology CDS 4389414 4389848 . - 0 ID=cds3929;Parent=gene4028;Dbxref=Genbank:WP_002213341.1;Name=WP_002213341.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11 NC_008149.1 RefSeq gene 4389852 4390031 . - . ID=gene4029;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=YPN_RS20175;old_locus_tag=YPN_3841 NC_008149.1 Protein Homology CDS 4389852 4390031 . - 0 ID=cds3930;Parent=gene4029;Dbxref=Genbank:WP_002213339.1;Name=WP_002213339.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11 NC_008149.1 RefSeq gene 4390034 4390537 . - . ID=gene4030;Name=YPN_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20180;old_locus_tag=YPN_3842 NC_008149.1 Protein Homology CDS 4390034 4390537 . - 0 ID=cds3931;Parent=gene4030;Dbxref=Genbank:WP_002213337.1;Name=WP_002213337.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11 NC_008149.1 RefSeq gene 4390552 4390905 . - . ID=gene4031;Name=YPN_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20185;old_locus_tag=YPN_3843 NC_008149.1 Protein Homology CDS 4390552 4390905 . - 0 ID=cds3932;Parent=gene4031;Dbxref=Genbank:WP_002213336.1;Name=WP_002213336.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11 NC_008149.1 RefSeq gene 4390915 4391448 . - . ID=gene4032;Name=YPN_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20190;old_locus_tag=YPN_3844 NC_008149.1 Protein Homology CDS 4390915 4391448 . - 0 ID=cds3933;Parent=gene4032;Dbxref=Genbank:WP_002213334.1;Name=WP_002213334.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11 NC_008149.1 RefSeq gene 4391463 4391855 . - . ID=gene4033;Name=YPN_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20195;old_locus_tag=YPN_3845 NC_008149.1 Protein Homology CDS 4391463 4391855 . - 0 ID=cds3934;Parent=gene4033;Dbxref=Genbank:WP_002213332.1;Name=WP_002213332.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11 NC_008149.1 RefSeq gene 4391889 4392194 . - . ID=gene4034;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=YPN_RS20200;old_locus_tag=YPN_3846 NC_008149.1 Protein Homology CDS 4391889 4392194 . - 0 ID=cds3935;Parent=gene4034;Dbxref=Genbank:WP_002213330.1;Name=WP_002213330.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11 NC_008149.1 RefSeq gene 4392208 4392747 . - . ID=gene4035;Name=YPN_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20205;old_locus_tag=YPN_3847 NC_008149.1 Protein Homology CDS 4392208 4392747 . - 0 ID=cds3936;Parent=gene4035;Dbxref=Genbank:WP_002213329.1;Name=WP_002213329.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11 NC_008149.1 RefSeq gene 4392762 4393076 . - . ID=gene4036;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=YPN_RS20210;old_locus_tag=YPN_3848 NC_008149.1 Protein Homology CDS 4392762 4393076 . - 0 ID=cds3937;Parent=gene4036;Dbxref=Genbank:WP_002213327.1;Name=WP_002213327.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11 NC_008149.1 RefSeq gene 4393087 4393458 . - . ID=gene4037;Name=YPN_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20215;old_locus_tag=YPN_3849 NC_008149.1 Protein Homology CDS 4393087 4393458 . - 0 ID=cds3938;Parent=gene4037;Dbxref=Genbank:WP_002213325.1;Name=WP_002213325.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11 NC_008149.1 RefSeq gene 4393639 4393893 . - . ID=gene4038;Name=YPN_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20220;old_locus_tag=YPN_3850 NC_008149.1 Protein Homology CDS 4393639 4393893 . - 0 ID=cds3939;Parent=gene4038;Dbxref=Genbank:WP_002228135.1;Name=WP_002228135.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_002228135.1;transl_table=11 NC_008149.1 RefSeq gene 4393893 4394084 . - . ID=gene4039;Name=YPN_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20225;old_locus_tag=YPN_3851 NC_008149.1 Protein Homology CDS 4393893 4394084 . - 0 ID=cds3940;Parent=gene4039;Dbxref=Genbank:WP_002218942.1;Name=WP_002218942.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_002218942.1;transl_table=11 NC_008149.1 RefSeq gene 4394084 4394494 . - . ID=gene4040;Name=YPN_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20230;old_locus_tag=YPN_3852 NC_008149.1 Protein Homology CDS 4394084 4394494 . - 0 ID=cds3941;Parent=gene4040;Dbxref=Genbank:WP_002218940.1;Name=WP_002218940.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_002218940.1;transl_table=11 NC_008149.1 RefSeq gene 4394507 4395205 . - . ID=gene4041;Name=YPN_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20235;old_locus_tag=YPN_3853 NC_008149.1 Protein Homology CDS 4394507 4395205 . - 0 ID=cds3942;Parent=gene4041;Dbxref=Genbank:WP_002221644.1;Name=WP_002221644.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11 NC_008149.1 RefSeq gene 4395223 4395555 . - . ID=gene4042;Name=YPN_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20240;old_locus_tag=YPN_3854 NC_008149.1 Protein Homology CDS 4395223 4395555 . - 0 ID=cds3943;Parent=gene4042;Dbxref=Genbank:WP_002223844.1;Name=WP_002223844.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11 NC_008149.1 RefSeq gene 4395570 4395848 . - . ID=gene4043;Name=YPN_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20245;old_locus_tag=YPN_3855 NC_008149.1 Protein Homology CDS 4395570 4395848 . - 0 ID=cds3944;Parent=gene4043;Dbxref=Genbank:WP_002213430.1;Name=WP_002213430.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11 NC_008149.1 RefSeq gene 4395863 4396687 . - . ID=gene4044;Name=YPN_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20250;old_locus_tag=YPN_3856 NC_008149.1 Protein Homology CDS 4395863 4396687 . - 0 ID=cds3945;Parent=gene4044;Dbxref=Genbank:WP_002213425.1;Name=WP_002213425.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11 NC_008149.1 RefSeq gene 4396704 4397006 . - . ID=gene4045;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=YPN_RS20255;old_locus_tag=YPN_3857 NC_008149.1 Protein Homology CDS 4396704 4397006 . - 0 ID=cds3946;Parent=gene4045;Dbxref=Genbank:WP_002213423.1;Name=WP_002213423.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11 NC_008149.1 RefSeq gene 4397003 4397608 . - . ID=gene4046;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=YPN_RS20260;old_locus_tag=YPN_3858 NC_008149.1 Protein Homology CDS 4397003 4397608 . - 0 ID=cds3947;Parent=gene4046;Dbxref=Genbank:WP_002218934.1;Name=WP_002218934.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_002218934.1;transl_table=11 NC_008149.1 RefSeq gene 4397625 4398254 . - . ID=gene4047;Name=YPN_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20265;old_locus_tag=YPN_3859 NC_008149.1 Protein Homology CDS 4397625 4398254 . - 0 ID=cds3948;Parent=gene4047;Dbxref=Genbank:WP_002218932.1;Name=WP_002218932.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11 NC_008149.1 RefSeq gene 4398287 4398598 . - . ID=gene4048;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=YPN_RS20270;old_locus_tag=YPN_3860 NC_008149.1 Protein Homology CDS 4398287 4398598 . - 0 ID=cds3949;Parent=gene4048;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NC_008149.1 RefSeq gene 4399012 4399485 . - . ID=gene4049;Name=YPN_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20275;old_locus_tag=YPN_3861 NC_008149.1 Protein Homology CDS 4399012 4399485 . - 0 ID=cds3950;Parent=gene4049;Dbxref=Genbank:WP_002212327.1;Name=WP_002212327.1;Note=iron storage protein;gbkey=CDS;product=bacterioferritin;protein_id=WP_002212327.1;transl_table=11 NC_008149.1 RefSeq gene 4399564 4399758 . - . ID=gene4050;Name=YPN_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20280;old_locus_tag=YPN_3862 NC_008149.1 Protein Homology CDS 4399564 4399758 . - 0 ID=cds3951;Parent=gene4050;Dbxref=Genbank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4399829 4400557 . + . ID=id359;gbkey=repeat_region NC_008149.1 RefSeq gene 4399946 4400404 . - . ID=gene4051;Name=YPN_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20285;old_locus_tag=YPN_3863 NC_008149.1 Protein Homology CDS 4399946 4400404 . - 0 ID=cds3952;Parent=gene4051;Dbxref=Genbank:WP_002213775.1;Name=WP_002213775.1;gbkey=CDS;product=transposase;protein_id=WP_002213775.1;transl_table=11 NC_008149.1 RefSeq gene 4400607 4401791 . - . ID=gene4052;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPN_RS20290;old_locus_tag=YPN_3864 NC_008149.1 Protein Homology CDS 4400607 4401791 . - 0 ID=cds3953;Parent=gene4052;Dbxref=Genbank:WP_002212326.1;Name=WP_002212326.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_002212326.1;transl_table=11 NC_008149.1 RefSeq gene 4401864 4403972 . - . ID=gene4053;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=YPN_RS20295;old_locus_tag=YPN_3865 NC_008149.1 Protein Homology CDS 4401864 4403972 . - 0 ID=cds3954;Parent=gene4053;Dbxref=Genbank:WP_002212325.1;Name=WP_002212325.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_002212325.1;transl_table=11 NC_008149.1 RefSeq gene 4404066 4404536 . - . ID=gene4054;Name=YPN_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20300;old_locus_tag=YPN_3866 NC_008149.1 Protein Homology CDS 4404066 4404536 . - 0 ID=cds3955;Parent=gene4054;Dbxref=Genbank:WP_002212324.1;Name=WP_002212324.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11 NC_008149.1 RefSeq gene 4404633 4405007 . - . ID=gene4055;Name=YPN_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20305;old_locus_tag=YPN_3867 NC_008149.1 Protein Homology CDS 4404633 4405007 . - 0 ID=cds3956;Parent=gene4055;Dbxref=Genbank:WP_002212323.1;Name=WP_002212323.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11 NC_008149.1 RefSeq gene 4405145 4405432 . - . ID=gene4056;Name=YPN_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20310;old_locus_tag=YPN_3868 NC_008149.1 Protein Homology CDS 4405145 4405432 . - 0 ID=cds3957;Parent=gene4056;Dbxref=Genbank:WP_002212322.1;Name=WP_002212322.1;gbkey=CDS;product=protein TusB;protein_id=WP_002212322.1;transl_table=11 NC_008149.1 RefSeq gene 4405452 4405817 . - . ID=gene4057;Name=YPN_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20315;old_locus_tag=YPN_3869 NC_008149.1 Protein Homology CDS 4405452 4405817 . - 0 ID=cds3958;Parent=gene4057;Dbxref=Genbank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;product=protein TusC;protein_id=WP_002212321.1;transl_table=11 NC_008149.1 RefSeq gene 4405817 4406212 . - . ID=gene4058;Name=YPN_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20320;old_locus_tag=YPN_3870 NC_008149.1 Protein Homology CDS 4405817 4406212 . - 0 ID=cds3959;Parent=gene4058;Dbxref=Genbank:WP_002212320.1;Name=WP_002212320.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfurtransferase TusD;protein_id=WP_002212320.1;transl_table=11 NC_008149.1 RefSeq gene 4406212 4406934 . - . ID=gene4059;Name=YPN_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20325;old_locus_tag=YPN_3871 NC_008149.1 Protein Homology CDS 4406212 4406934 . - 0 ID=cds3960;Parent=gene4059;Dbxref=Genbank:WP_002212319.1;Name=WP_002212319.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212319.1;transl_table=11 NC_008149.1 RefSeq gene 4407188 4407988 . - . ID=gene4060;Name=YPN_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20330;old_locus_tag=YPN_3872 NC_008149.1 Protein Homology CDS 4407188 4407988 . - 0 ID=cds3961;Parent=gene4060;Dbxref=Genbank:WP_002212318.1;Name=WP_002212318.1;Note=rotamase;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11 NC_008149.1 RefSeq gene 4408303 4408521 . + . ID=gene4061;Name=YPN_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20335;old_locus_tag=YPN_3873 NC_008149.1 Protein Homology CDS 4408303 4408521 . + 0 ID=cds3962;Parent=gene4061;Dbxref=Genbank:WP_002212317.1;Name=WP_002212317.1;Note=required for phi X174 lysis;gbkey=CDS;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11 NC_008149.1 RefSeq gene 4408742 4409329 . - . ID=gene4062;Name=YPN_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20340;old_locus_tag=YPN_3874 NC_008149.1 Protein Homology CDS 4408742 4409329 . - 0 ID=cds3963;Parent=gene4062;Dbxref=Genbank:WP_002212316.1;Name=WP_002212316.1;Note=rotamase;gbkey=CDS;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212316.1;transl_table=11 NC_008149.1 RefSeq gene 4409424 4409645 . - . ID=gene4063;Name=YPN_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20345;old_locus_tag=YPN_3875 NC_008149.1 Protein Homology CDS 4409424 4409645 . - 0 ID=cds3964;Parent=gene4063;Dbxref=Genbank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212315.1;transl_table=11 NC_008149.1 RefSeq gene 4409661 4411469 . - . ID=gene4064;Name=YPN_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20350;old_locus_tag=YPN_3876 NC_008149.1 Protein Homology CDS 4409661 4411469 . - 0 ID=cds3965;Parent=gene4064;Dbxref=Genbank:WP_002212314.1;Name=WP_002212314.1;Note=involved in potassium efflux;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_002212314.1;transl_table=11 NC_008149.1 RefSeq gene 4411473 4412021 . - . ID=gene4065;Name=YPN_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20355;old_locus_tag=YPN_3877 NC_008149.1 Protein Homology CDS 4411473 4412021 . - 0 ID=cds3966;Parent=gene4065;Dbxref=Genbank:WP_002215966.1;Name=WP_002215966.1;Note=required for KefB activity;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_002215966.1;transl_table=11 NC_008149.1 RefSeq gene 4412272 4414190 . + . ID=gene4066;Name=YPN_RS20360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS20360;old_locus_tag=YPN_3879;pseudo=true NC_008149.1 Protein Homology CDS 4412272 4414190 . + 0 ID=cds3967;Parent=gene4066;exception=annotated by transcript or proteomic data;gbkey=CDS;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NC_008149.1 RefSeq gene 4414325 4415314 . + . ID=gene4067;Name=YPN_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20365;old_locus_tag=YPN_3880 NC_008149.1 Protein Homology CDS 4414325 4415314 . + 0 ID=cds3968;Parent=gene4067;Dbxref=Genbank:WP_002212312.1;Name=WP_002212312.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002212312.1;transl_table=11 NC_008149.1 RefSeq gene 4415407 4416387 . + . ID=gene4068;Name=YPN_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20370;old_locus_tag=YPN_3881 NC_008149.1 Protein Homology CDS 4415407 4416387 . + 0 ID=cds3969;Parent=gene4068;Dbxref=Genbank:WP_002212311.1;Name=WP_002212311.1;gbkey=CDS;product=glycosyl transferase;protein_id=WP_002212311.1;transl_table=11 NC_008149.1 RefSeq gene 4416400 4417248 . - . ID=gene4069;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=YPN_RS20375;old_locus_tag=YPN_3882 NC_008149.1 Protein Homology CDS 4416400 4417248 . - 0 ID=cds3970;Parent=gene4069;Dbxref=Genbank:WP_002212310.1;Name=WP_002212310.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11 NC_008149.1 RefSeq gene 4417245 4418099 . - . ID=gene4070;Name=YPN_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20380;old_locus_tag=YPN_3883 NC_008149.1 Protein Homology CDS 4417245 4418099 . - 0 ID=cds3971;Parent=gene4070;Dbxref=Genbank:WP_002212309.1;Name=WP_002212309.1;gbkey=CDS;product=taurine ABC transporter permease;protein_id=WP_002212309.1;transl_table=11 NC_008149.1 RefSeq gene 4418096 4418863 . - . ID=gene4071;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=YPN_RS20385;old_locus_tag=YPN_3884 NC_008149.1 Protein Homology CDS 4418096 4418863 . - 0 ID=cds3972;Parent=gene4071;Dbxref=Genbank:WP_002212307.1;Name=WP_002212307.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine import ATP-binding protein TauB;protein_id=WP_002212307.1;transl_table=11 NC_008149.1 RefSeq gene 4418872 4419933 . - . ID=gene4072;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=YPN_RS20390;old_locus_tag=YPN_3885 NC_008149.1 Protein Homology CDS 4418872 4419933 . - 0 ID=cds3973;Parent=gene4072;Dbxref=Genbank:WP_002212305.1;Name=WP_002212305.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine ABC transporter substrate-binding protein;protein_id=WP_002212305.1;transl_table=11 NC_008149.1 RefSeq gene 4420136 4420738 . - . ID=gene4073;Name=YPN_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20395;old_locus_tag=YPN_3886 NC_008149.1 Protein Homology CDS 4420136 4420738 . - 0 ID=cds3974;Parent=gene4073;Dbxref=Genbank:WP_002212303.1;Name=WP_002212303.1;gbkey=CDS;product=alcohol dehydrogenase;protein_id=WP_002212303.1;transl_table=11 NC_008149.1 RefSeq gene 4420840 4421820 . + . ID=gene4074;Name=YPN_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20400;old_locus_tag=YPN_3887 NC_008149.1 Protein Homology CDS 4420840 4421820 . + 0 ID=cds3975;Parent=gene4074;Dbxref=Genbank:WP_002212302.1;Name=WP_002212302.1;gbkey=CDS;product=hydrolase;protein_id=WP_002212302.1;transl_table=11 NC_008149.1 RefSeq gene 4421817 4422053 . + . ID=gene4075;Name=YPN_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20405;old_locus_tag=YPN_3888 NC_008149.1 Protein Homology CDS 4421817 4422053 . + 0 ID=cds3976;Parent=gene4075;Dbxref=Genbank:WP_002212301.1;Name=WP_002212301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212301.1;transl_table=11 NC_008149.1 RefSeq gene 4422202 4423071 . + . ID=gene4076;Name=YPN_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20410;old_locus_tag=YPN_3889 NC_008149.1 Protein Homology CDS 4422202 4423071 . + 0 ID=cds3977;Parent=gene4076;Dbxref=Genbank:WP_002212300.1;Name=WP_002212300.1;gbkey=CDS;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11 NC_008149.1 RefSeq gene 4423249 4423680 . - . ID=gene4077;Name=YPN_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20415;old_locus_tag=YPN_3890 NC_008149.1 Protein Homology CDS 4423249 4423680 . - 0 ID=cds3978;Parent=gene4077;Dbxref=Genbank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228139.1;transl_table=11 NC_008149.1 RefSeq gene 4423752 4424159 . - . ID=gene4078;Name=YPN_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20420;old_locus_tag=YPN_3891 NC_008149.1 Protein Homology CDS 4423752 4424159 . - 0 ID=cds3979;Parent=gene4078;Dbxref=Genbank:WP_002212298.1;Name=WP_002212298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002212298.1;transl_table=11 NC_008149.1 RefSeq gene 4424495 4425127 . + . ID=gene4079;Name=YPN_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20425;old_locus_tag=YPN_3892 NC_008149.1 Protein Homology CDS 4424495 4425127 . + 0 ID=cds3980;Parent=gene4079;Dbxref=Genbank:WP_002212297.1;Name=WP_002212297.1;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002212297.1;transl_table=11 NC_008149.1 RefSeq gene 4425213 4427333 . + . ID=gene4080;Name=YPN_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20430;old_locus_tag=YPN_3893 NC_008149.1 Protein Homology CDS 4425213 4427333 . + 0 ID=cds3981;Parent=gene4080;Dbxref=Genbank:WP_002212296.1;Name=WP_002212296.1;gbkey=CDS;product=membrane protein;protein_id=WP_002212296.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4427353 4427522 . + . ID=id360;gbkey=repeat_region NC_008149.1 RefSeq gene 4427559 4428776 . - . ID=gene4081;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=YPN_RS20435;old_locus_tag=YPN_3894 NC_008149.1 Protein Homology CDS 4427559 4428776 . - 0 ID=cds3982;Parent=gene4081;Dbxref=Genbank:WP_002212295.1;Name=WP_002212295.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;product=acetylornithine aminotransferase;protein_id=WP_002212295.1;transl_table=11 NC_008149.1 RefSeq gene 4428909 4429484 . - . ID=gene4082;Name=YPN_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20440;old_locus_tag=YPN_3895 NC_008149.1 Protein Homology CDS 4428909 4429484 . - 0 ID=cds3983;Parent=gene4082;Dbxref=Genbank:WP_002223842.1;Name=WP_002223842.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;product=anthranilate synthase subunit II;protein_id=WP_002223842.1;transl_table=11 NC_008149.1 RefSeq gene 4429727 4431268 . - . ID=gene4083;Name=YPN_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20445;old_locus_tag=YPN_3896 NC_008149.1 Protein Homology CDS 4429727 4431268 . - 0 ID=cds3984;Parent=gene4083;Dbxref=Genbank:WP_002215686.1;Name=WP_002215686.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215686.1;transl_table=11 NC_008149.1 RefSeq gene 4431594 4432163 . - . ID=gene4084;Name=YPN_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20450;old_locus_tag=YPN_3897 NC_008149.1 Protein Homology CDS 4431594 4432163 . - 0 ID=cds3985;Parent=gene4084;Dbxref=Genbank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_002208878.1;transl_table=11 NC_008149.1 RefSeq gene 4432679 4433992 . + . ID=gene4085;Name=YPN_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20455;old_locus_tag=YPN_3898 NC_008149.1 Protein Homology CDS 4432679 4433992 . + 0 ID=cds3986;Parent=gene4085;Dbxref=Genbank:WP_002208880.1;Name=WP_002208880.1;Note=catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate;gbkey=CDS;product=glycosyl hydrolase;protein_id=WP_002208880.1;transl_table=11 NC_008149.1 RefSeq gene 4434241 4435227 . + . ID=gene4086;Name=YPN_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20460;old_locus_tag=YPN_3899 NC_008149.1 Protein Homology CDS 4434241 4435227 . + 0 ID=cds3987;Parent=gene4086;Dbxref=Genbank:WP_002208881.1;Name=WP_002208881.1;gbkey=CDS;product=LacI family transcriptional regulator;protein_id=WP_002208881.1;transl_table=11 NC_008149.1 RefSeq gene 4435340 4437400 . - . ID=gene4087;Name=YPN_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20465;old_locus_tag=YPN_3900 NC_008149.1 Protein Homology CDS 4435340 4437400 . - 0 ID=cds3988;Parent=gene4087;Dbxref=Genbank:WP_002208882.1;Name=WP_002208882.1;gbkey=CDS;product=TonB-dependent receptor;protein_id=WP_002208882.1;transl_table=11 NC_008149.1 RefSeq gene 4437886 4439070 . + . ID=gene4088;Name=YPN_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20470;old_locus_tag=YPN_3901 NC_008149.1 Protein Homology CDS 4437886 4439070 . + 0 ID=cds3989;Parent=gene4088;Dbxref=Genbank:WP_002215690.1;Name=WP_002215690.1;gbkey=CDS;product=protein TsgA;protein_id=WP_002215690.1;transl_table=11 NC_008149.1 RefSeq gene 4439155 4440453 . - . ID=gene4089;Name=YPN_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20475;old_locus_tag=YPN_3902 NC_008149.1 Protein Homology CDS 4439155 4440453 . - 0 ID=cds3990;Parent=gene4089;Dbxref=Genbank:WP_002228747.1;Name=WP_002228747.1;Note=Catalyzes the deamination of cytosine to uracil and ammonia;gbkey=CDS;product=cytosine deaminase;protein_id=WP_002228747.1;transl_table=11 NC_008149.1 RefSeq gene 4440775 4443321 . + . ID=gene4090;Name=YPN_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20480;old_locus_tag=YPN_3903 NC_008149.1 Protein Homology CDS 4440775 4443321 . + 0 ID=cds3991;Parent=gene4090;Dbxref=Genbank:WP_002208886.1;Name=WP_002208886.1;gbkey=CDS;product=nitrite reductase subunit NirD;protein_id=WP_002208886.1;transl_table=11 NC_008149.1 RefSeq gene 4443318 4443644 . + . ID=gene4091;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=YPN_RS20485;old_locus_tag=YPN_3904 NC_008149.1 Protein Homology CDS 4443318 4443644 . + 0 ID=cds3992;Parent=gene4091;Dbxref=Genbank:WP_002208887.1;Name=WP_002208887.1;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=WP_002208887.1;transl_table=11 NC_008149.1 RefSeq gene 4443871 4444677 . + . ID=gene4092;Name=YPN_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20490;old_locus_tag=YPN_3906 NC_008149.1 Protein Homology CDS 4443871 4444677 . + 0 ID=cds3993;Parent=gene4092;Dbxref=Genbank:WP_002208888.1;Name=WP_002208888.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;product=nitrite transporter NirC;protein_id=WP_002208888.1;transl_table=11 NC_008149.1 RefSeq gene 4444765 4446177 . + . ID=gene4093;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YPN_RS20495;old_locus_tag=YPN_3907 NC_008149.1 Protein Homology CDS 4444765 4446177 . + 0 ID=cds3994;Parent=gene4093;Dbxref=Genbank:WP_002208890.1;Name=WP_002208890.1;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;gbkey=CDS;gene=cysG;product=siroheme synthase 2;protein_id=WP_002208890.1;transl_table=11 NC_008149.1 RefSeq gene 4446332 4447372 . - . ID=gene4094;Name=YPN_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20500;old_locus_tag=YPN_3908 NC_008149.1 Protein Homology CDS 4446332 4447372 . - 0 ID=cds3995;Parent=gene4094;Dbxref=Genbank:WP_002208891.1;Name=WP_002208891.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_002208891.1;transl_table=11 NC_008149.1 RefSeq gene 4447374 4448072 . - . ID=gene4095;Name=YPN_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20505;old_locus_tag=YPN_3909 NC_008149.1 Protein Homology CDS 4447374 4448072 . - 0 ID=cds3996;Parent=gene4095;Dbxref=Genbank:WP_002208892.1;Name=WP_002208892.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=WP_002208892.1;transl_table=11 NC_008149.1 RefSeq gene 4448065 4448742 . - . ID=gene4096;Name=YPN_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20510;old_locus_tag=YPN_3910 NC_008149.1 Protein Homology CDS 4448065 4448742 . - 0 ID=cds3997;Parent=gene4096;Dbxref=Genbank:WP_002215694.1;Name=WP_002215694.1;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11 NC_008149.1 RefSeq gene 4449045 4449860 . - . ID=gene4097;Name=YPN_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20515;old_locus_tag=YPN_3911 NC_008149.1 Protein Homology CDS 4449045 4449860 . - 0 ID=cds3998;Parent=gene4097;Dbxref=Genbank:WP_002208895.1;Name=WP_002208895.1;gbkey=CDS;product=DNA adenine methylase;protein_id=WP_002208895.1;transl_table=11 NC_008149.1 RefSeq gene 4449944 4450933 . - . ID=gene4098;Name=YPN_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20520;old_locus_tag=YPN_3912 NC_008149.1 Protein Homology CDS 4449944 4450933 . - 0 ID=cds3999;Parent=gene4098;Dbxref=Genbank:WP_002208897.1;Name=WP_002208897.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208897.1;transl_table=11 NC_008149.1 RefSeq gene 4451187 4452275 . - . ID=gene4099;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=YPN_RS20525;old_locus_tag=YPN_3913 NC_008149.1 Protein Homology CDS 4451187 4452275 . - 0 ID=cds4000;Parent=gene4099;Dbxref=Genbank:WP_002208898.1;Name=WP_002208898.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11 NC_008149.1 RefSeq gene 4452332 4452853 . - . ID=gene4100;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=YPN_RS20530;old_locus_tag=YPN_3914 NC_008149.1 Protein Homology CDS 4452332 4452853 . - 0 ID=cds4001;Parent=gene4100;Dbxref=Genbank:WP_002208899.1;Name=WP_002208899.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_002208899.1;transl_table=11 NC_008149.1 RefSeq gene 4453202 4454326 . - . ID=gene4101;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=YPN_RS20535;old_locus_tag=YPN_3915 NC_008149.1 Protein Homology CDS 4453202 4454326 . - 0 ID=cds4002;Parent=gene4101;Dbxref=Genbank:WP_002228144.1;Name=WP_002228144.1;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;gbkey=CDS;gene=hofQ;product=porin;protein_id=WP_002228144.1;transl_table=11 NC_008149.1 RefSeq gene 4454361 4454750 . + . ID=gene4102;Name=YPN_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20540;old_locus_tag=YPN_3916 NC_008149.1 Protein Homology CDS 4454361 4454750 . + 0 ID=cds4003;Parent=gene4102;Dbxref=Genbank:WP_002208901.1;Name=WP_002208901.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208901.1;transl_table=11 NC_008149.1 RefSeq gene 4454753 4455112 . - . ID=gene4103;Name=YPN_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20545;old_locus_tag=YPN_3917 NC_008149.1 Protein Homology CDS 4454753 4455112 . - 0 ID=cds4004;Parent=gene4103;Dbxref=Genbank:WP_002223837.1;Name=WP_002223837.1;gbkey=CDS;product=membrane protein;protein_id=WP_002223837.1;transl_table=11 NC_008149.1 RefSeq gene 4455147 4455728 . - . ID=gene4104;Name=YPN_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20550;old_locus_tag=YPN_3918 NC_008149.1 Protein Homology CDS 4455147 4455728 . - 0 ID=cds4005;Parent=gene4104;Dbxref=Genbank:WP_002217890.1;Name=WP_002217890.1;gbkey=CDS;product=membrane protein;protein_id=WP_002217890.1;transl_table=11 NC_008149.1 RefSeq gene 4455721 4456326 . - . ID=gene4105;Name=YPN_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20555;old_locus_tag=YPN_3919 NC_008149.1 Protein Homology CDS 4455721 4456326 . - 0 ID=cds4006;Parent=gene4105;Dbxref=Genbank:WP_002208904.1;Name=WP_002208904.1;gbkey=CDS;product=pilus assembly protein PilN;protein_id=WP_002208904.1;transl_table=11 NC_008149.1 RefSeq gene 4456326 4457222 . - . ID=gene4106;Name=YPN_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20560;old_locus_tag=YPN_3920 NC_008149.1 Protein Homology CDS 4456326 4457222 . - 0 ID=cds4007;Parent=gene4106;Dbxref=Genbank:WP_002208905.1;Name=WP_002208905.1;gbkey=CDS;product=pilus assembly protein HofM;protein_id=WP_002208905.1;transl_table=11 NC_008149.1 RefSeq gene 4457342 4459897 . + . ID=gene4107;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=YPN_RS20565;old_locus_tag=YPN_3921 NC_008149.1 Protein Homology CDS 4457342 4459897 . + 0 ID=cds4008;Parent=gene4107;Dbxref=Genbank:WP_002208906.1;Name=WP_002208906.1;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=penicillin-binding protein 1A;protein_id=WP_002208906.1;transl_table=11 NC_008149.1 RefSeq gene 4460033 4460578 . - . ID=gene4108;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=YPN_RS20570;old_locus_tag=YPN_3922 NC_008149.1 Protein Homology CDS 4460033 4460578 . - 0 ID=cds4009;Parent=gene4108;Dbxref=Genbank:WP_002208907.1;Name=WP_002208907.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase;protein_id=WP_002208907.1;transl_table=11 NC_008149.1 RefSeq gene 4460691 4460885 . - . ID=gene4109;Name=YPN_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20575 NC_008149.1 Protein Homology CDS 4460691 4460885 . - 0 ID=cds4010;Parent=gene4109;Dbxref=Genbank:WP_002216768.1;Name=WP_002216768.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002216768.1;transl_table=11 NC_008149.1 RefSeq gene 4461165 4463312 . + . ID=gene4110;Name=YPN_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20580;old_locus_tag=YPN_3923 NC_008149.1 Protein Homology CDS 4461165 4463312 . + 0 ID=cds4011;Parent=gene4110;Dbxref=Genbank:WP_002208908.1;Name=WP_002208908.1;gbkey=CDS;product=intracellular growth attenuator protein IgaA;protein_id=WP_002208908.1;transl_table=11 NC_008149.1 RefSeq gene 4463456 4464136 . + . ID=gene4111;Name=YPN_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20585;old_locus_tag=YPN_3924 NC_008149.1 Protein Homology CDS 4463456 4464136 . + 0 ID=cds4012;Parent=gene4111;Dbxref=Genbank:WP_002208909.1;Name=WP_002208909.1;gbkey=CDS;product=nucleotidase;protein_id=WP_002208909.1;transl_table=11 NC_008149.1 RefSeq gene 4464165 4464572 . + . ID=gene4112;Name=YPN_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20590;old_locus_tag=YPN_3925 NC_008149.1 Protein Homology CDS 4464165 4464572 . + 0 ID=cds4013;Parent=gene4112;Dbxref=Genbank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;product=heat-shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11 NC_008149.1 RefSeq gene 4464735 4465616 . + . ID=gene4113;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=YPN_RS20595;old_locus_tag=YPN_3926 NC_008149.1 Protein Homology CDS 4464735 4465616 . + 0 ID=cds4014;Parent=gene4113;Dbxref=Genbank:WP_002208911.1;Name=WP_002208911.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;product=molecular chaperone Hsp33;protein_id=WP_002208911.1;transl_table=11 NC_008149.1 RefSeq gene 4465813 4467432 . + . ID=gene4114;Name=YPN_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20600;old_locus_tag=YPN_3927 NC_008149.1 Protein Homology CDS 4465813 4467432 . + 0 ID=cds4015;Parent=gene4114;Dbxref=Genbank:WP_002208912.1;Name=WP_002208912.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=WP_002208912.1;transl_table=11 NC_008149.1 RefSeq gene 4467567 4468919 . - . ID=gene4115;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=YPN_RS20605;old_locus_tag=YPN_3928 NC_008149.1 Protein Homology CDS 4467567 4468919 . - 0 ID=cds4016;Parent=gene4115;Dbxref=Genbank:WP_002208913.1;Name=WP_002208913.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=two-component system sensor histidine kinase;protein_id=WP_002208913.1;transl_table=11 NC_008149.1 RefSeq gene 4468916 4469635 . - . ID=gene4116;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=YPN_RS20610;old_locus_tag=YPN_3929 NC_008149.1 Protein Homology CDS 4468916 4469635 . - 0 ID=cds4017;Parent=gene4116;Dbxref=Genbank:WP_002208914.1;Name=WP_002208914.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=two-component system response regulator;protein_id=WP_002208914.1;transl_table=11 NC_008149.1 RefSeq gene 4469771 4470286 . - . ID=gene4117;Name=YPN_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20615;old_locus_tag=YPN_3930 NC_008149.1 Protein Homology CDS 4469771 4470286 . - 0 ID=cds4018;Parent=gene4117;Dbxref=Genbank:WP_002208915.1;Name=WP_002208915.1;gbkey=CDS;product=transcription elongation factor GreB;protein_id=WP_002208915.1;transl_table=11 NC_008149.1 RefSeq gene 4470820 4473195 . + . ID=gene4118;Name=YPN_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20620;old_locus_tag=YPN_3931 NC_008149.1 Protein Homology CDS 4470820 4473195 . + 0 ID=cds4019;Parent=gene4118;Dbxref=Genbank:WP_002208916.1;Name=WP_002208916.1;gbkey=CDS;product=transcription accessory protein;protein_id=WP_002208916.1;transl_table=11 NC_008149.1 RefSeq gene 4473578 4473724 . - . ID=gene4119;Name=YPN_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20625 NC_008149.1 Protein Homology CDS 4473578 4473724 . - 0 ID=cds4020;Parent=gene4119;Dbxref=Genbank:WP_002215925.1;Name=WP_002215925.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215925.1;transl_table=11 NC_008149.1 RefSeq gene 4473719 4473946 . + . ID=gene4120;Name=YPN_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20630;old_locus_tag=YPN_3932 NC_008149.1 Protein Homology CDS 4473719 4473946 . + 0 ID=cds4021;Parent=gene4120;Dbxref=Genbank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;product=iron transporter;protein_id=WP_002208918.1;transl_table=11 NC_008149.1 RefSeq gene 4474038 4476353 . + . ID=gene4121;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=YPN_RS20635;old_locus_tag=YPN_3933 NC_008149.1 Protein Homology CDS 4474038 4476353 . + 0 ID=cds4022;Parent=gene4121;Dbxref=Genbank:WP_002208919.1;Name=WP_002208919.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=iron transporter;protein_id=WP_002208919.1;transl_table=11 NC_008149.1 RefSeq gene 4476389 4476646 . + . ID=gene4122;Name=YPN_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20640;old_locus_tag=YPN_3934 NC_008149.1 Protein Homology CDS 4476389 4476646 . + 0 ID=cds4023;Parent=gene4122;Dbxref=Genbank:WP_002208920.1;Name=WP_002208920.1;Note=regulatory protein that controls transcription of feoABC genes;gbkey=CDS;product=ferrous iron transporter C;protein_id=WP_002208920.1;transl_table=11 NC_008149.1 RefSeq gene 4476784 4477053 . - . ID=gene4123;Name=YPN_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20645;old_locus_tag=YPN_3935 NC_008149.1 Protein Homology CDS 4476784 4477053 . - 0 ID=cds4024;Parent=gene4123;Dbxref=Genbank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002208921.1;transl_table=11 NC_008149.1 RefSeq gene 4477223 4477999 . - . ID=gene4124;Name=YPN_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20650;old_locus_tag=YPN_3936 NC_008149.1 Protein Homology CDS 4477223 4477999 . - 0 ID=cds4025;Parent=gene4124;Dbxref=Genbank:WP_002208922.1;Name=WP_002208922.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=WP_002208922.1;transl_table=11 NC_008149.1 RefSeq gene 4478086 4478787 . + . ID=gene4125;Name=YPN_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20655;old_locus_tag=YPN_3937 NC_008149.1 Protein Homology CDS 4478086 4478787 . + 0 ID=cds4026;Parent=gene4125;Dbxref=Genbank:WP_002208923.1;Name=WP_002208923.1;gbkey=CDS;product=competence protein ComF;protein_id=WP_002208923.1;transl_table=11 NC_008149.1 RefSeq gene 4478847 4479422 . + . ID=gene4126;Name=YPN_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20660;old_locus_tag=YPN_3938 NC_008149.1 Protein Homology CDS 4478847 4479422 . + 0 ID=cds4027;Parent=gene4126;Dbxref=Genbank:WP_002208924.1;Name=WP_002208924.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=fe/S biogenesis protein nfuA;protein_id=WP_002208924.1;transl_table=11 NC_008149.1 RefSeq gene 4479751 4481847 . - . ID=gene4127;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=YPN_RS20665;old_locus_tag=YPN_3939 NC_008149.1 Protein Homology CDS 4479751 4481847 . - 0 ID=cds4028;Parent=gene4127;Dbxref=Genbank:WP_002208925.1;Name=WP_002208925.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11 NC_008149.1 RefSeq gene 4481860 4483884 . - . ID=gene4128;Name=YPN_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20670;old_locus_tag=YPN_3940 NC_008149.1 Protein Homology CDS 4481860 4483884 . - 0 ID=cds4029;Parent=gene4128;Dbxref=Genbank:WP_042673307.1;Name=WP_042673307.1;gbkey=CDS;product=maltose phosphorylase;protein_id=WP_042673307.1;transl_table=11 NC_008149.1 RefSeq gene 4483914 4484264 . - . ID=gene4129;Name=YPN_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20675;old_locus_tag=YPN_3941 NC_008149.1 GeneMarkS+ CDS 4483914 4484264 . - 0 ID=cds4030;Parent=gene4129;Dbxref=Genbank:WP_002215922.1;Name=WP_002215922.1;gbkey=CDS;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_002215922.1;transl_table=11 NC_008149.1 RefSeq gene 4484582 4485418 . + . ID=gene4130;Name=YPN_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20680;old_locus_tag=YPN_3942 NC_008149.1 Protein Homology CDS 4484582 4485418 . + 0 ID=cds4031;Parent=gene4130;Dbxref=Genbank:WP_002228754.1;Name=WP_002228754.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002228754.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4485360 4487316 . + . ID=id361;gbkey=repeat_region NC_008149.1 RefSeq gene 4485428 4486207 . - . ID=gene4131;Name=YPN_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20685;old_locus_tag=YPN_3943 NC_008149.1 Protein Homology CDS 4485428 4486207 . - 0 ID=cds4032;Parent=gene4131;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008149.1 RefSeq gene 4486207 4487208 . - . ID=gene4132;Name=YPN_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20690;old_locus_tag=YPN_3944 NC_008149.1 Protein Homology CDS 4486207 4487208 . - 0 ID=cds4033;Parent=gene4132;Dbxref=Genbank:WP_001467697.1;Name=WP_001467697.1;gbkey=CDS;product=transposase;protein_id=WP_001467697.1;transl_table=11 NC_008149.1 RefSeq gene 4487195 4489252 . + . ID=gene4133;Name=YPN_RS20695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS20695;old_locus_tag=YPN_3945;partial=true;pseudo=true;start_range=.,4487195 NC_008149.1 Protein Homology CDS 4487195 4489252 . + 0 ID=cds4034;Parent=gene4133;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;partial=true;product=transcriptional regulator MalT;pseudo=true;start_range=.,4487195;transl_except=(pos:4487270..4487272%2Caa:Other);transl_table=11 NC_008149.1 RefSeq gene 4489627 4489956 . + . ID=gene4134;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=YPN_RS20700;old_locus_tag=YPN_3946 NC_008149.1 Protein Homology CDS 4489627 4489956 . + 0 ID=cds4035;Parent=gene4134;Dbxref=Genbank:WP_002218928.1;Name=WP_002218928.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002218928.1;transl_table=11 NC_008149.1 RefSeq gene 4489974 4490810 . + . ID=gene4135;Name=YPN_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20705;old_locus_tag=YPN_3947 NC_008149.1 Protein Homology CDS 4489974 4490810 . + 0 ID=cds4036;Parent=gene4135;Dbxref=Genbank:WP_002216348.1;Name=WP_002216348.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;product=rhomboid protease GlpG;protein_id=WP_002216348.1;transl_table=11 NC_008149.1 RefSeq gene 4490845 4491603 . + . ID=gene4136;Name=YPN_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20710;old_locus_tag=YPN_3948 NC_008149.1 Protein Homology CDS 4490845 4491603 . + 0 ID=cds4037;Parent=gene4136;Dbxref=Genbank:WP_002208930.1;Name=WP_002208930.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002208930.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4491658 4493182 . + . ID=id362;gbkey=repeat_region NC_008149.1 RefSeq gene 4491796 4492311 . + . ID=gene4137;Name=YPN_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20715;old_locus_tag=YPN_3949 NC_008149.1 Protein Homology CDS 4491796 4492311 . + 0 ID=cds4038;Parent=gene4137;Dbxref=Genbank:WP_002209258.1;Name=WP_002209258.1;gbkey=CDS;product=transposase;protein_id=WP_002209258.1;transl_table=11 NC_008149.1 RefSeq gene 4492365 4493150 . + . ID=gene4138;Name=YPN_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20720;old_locus_tag=YPN_3950 NC_008149.1 Protein Homology CDS 4492365 4493150 . + 0 ID=cds4039;Parent=gene4138;Dbxref=Genbank:WP_002208932.1;Name=WP_002208932.1;gbkey=CDS;product=integrase;protein_id=WP_002208932.1;transl_table=11 NC_008149.1 RefSeq gene 4493381 4494190 . - . ID=gene4139;Name=YPN_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20725;old_locus_tag=YPN_3951 NC_008149.1 Protein Homology CDS 4493381 4494190 . - 0 ID=cds4040;Parent=gene4139;Dbxref=Genbank:WP_002209641.1;Name=WP_002209641.1;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;gbkey=CDS;product=sugar phosphate phosphatase;protein_id=WP_002209641.1;transl_table=11 NC_008149.1 RefSeq gene 4494406 4496820 . - . ID=gene4140;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=YPN_RS20730;old_locus_tag=YPN_3952 NC_008149.1 Protein Homology CDS 4494406 4496820 . - 0 ID=cds4041;Parent=gene4140;Dbxref=Genbank:WP_002209642.1;Name=WP_002209642.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_002209642.1;transl_table=11 NC_008149.1 RefSeq gene 4496840 4497925 . - . ID=gene4141;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=YPN_RS20735;old_locus_tag=YPN_3953 NC_008149.1 Protein Homology CDS 4496840 4497925 . - 0 ID=cds4042;Parent=gene4141;Dbxref=Genbank:WP_002209643.1;Name=WP_002209643.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=DNA recombination protein RecF;protein_id=WP_002209643.1;transl_table=11 NC_008149.1 RefSeq gene 4497924 4498094 . + . ID=gene4142;Name=YPN_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20740 NC_008149.1 Protein Homology CDS 4497924 4498094 . + 0 ID=cds4043;Parent=gene4142;Dbxref=Genbank:WP_002218418.1;Name=WP_002218418.1;gbkey=CDS;product=recombinase F;protein_id=WP_002218418.1;transl_table=11 NC_008149.1 RefSeq gene 4498098 4499198 . - . ID=gene4143;Name=YPN_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20745;old_locus_tag=YPN_3954 NC_008149.1 Protein Homology CDS 4498098 4499198 . - 0 ID=cds4044;Parent=gene4143;Dbxref=Genbank:WP_002209645.1;Name=WP_002209645.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_002209645.1;transl_table=11 NC_008149.1 RefSeq gene 4499203 4500591 . - . ID=gene4144;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=YPN_RS20750;old_locus_tag=YPN_3955 NC_008149.1 Protein Homology CDS 4499203 4500591 . - 0 ID=cds4045;Parent=gene4144;Dbxref=Genbank:WP_002220732.1;Name=WP_002220732.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=WP_002220732.1;transl_table=11 NC_008149.1 RefSeq gene 4501301 4501441 . + . ID=gene4145;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=YPN_RS20755;old_locus_tag=YPN_3956 NC_008149.1 Protein Homology CDS 4501301 4501441 . + 0 ID=cds4046;Parent=gene4145;Dbxref=Genbank:WP_002220736.1;Name=WP_002220736.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11 NC_008149.1 RefSeq gene 4501460 4501819 . + . ID=gene4146;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=YPN_RS20760;old_locus_tag=YPN_3957 NC_008149.1 Protein Homology CDS 4501460 4501819 . + 0 ID=cds4047;Parent=gene4146;Dbxref=Genbank:WP_002228153.1;Name=WP_002228153.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_002228153.1;transl_table=11 NC_008149.1 RefSeq gene 4502043 4503683 . + . ID=gene4147;Name=YPN_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20765;old_locus_tag=YPN_3959 NC_008149.1 Protein Homology CDS 4502043 4503683 . + 0 ID=cds4048;Parent=gene4147;Dbxref=Genbank:WP_002220739.1;Name=WP_002220739.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=protein translocase component YidC;protein_id=WP_002220739.1;transl_table=11 NC_008149.1 RefSeq gene 4503826 4505190 . + . ID=gene4148;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=YPN_RS20770;old_locus_tag=YPN_3960 NC_008149.1 Protein Homology CDS 4503826 4505190 . + 0 ID=cds4049;Parent=gene4148;Dbxref=Genbank:WP_002220740.1;Name=WP_002220740.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase MnmE;protein_id=WP_002220740.1;transl_table=11 NC_008149.1 RefSeq gene 4505376 4506575 . + . ID=gene4149;Name=YPN_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20775;old_locus_tag=YPN_3961 NC_008149.1 Protein Homology CDS 4505376 4506575 . + 0 ID=cds4050;Parent=gene4149;Dbxref=Genbank:WP_002215588.1;Name=WP_002215588.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;product=trans-2-enoyl-CoA reductase;protein_id=WP_002215588.1;transl_table=11 NC_008149.1 RefSeq gene 4507043 4507324 . - . ID=gene4150;Name=YPN_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20780;old_locus_tag=YPN_3962 NC_008149.1 Protein Homology CDS 4507043 4507324 . - 0 ID=cds4051;Parent=gene4150;Dbxref=Genbank:WP_002215583.1;Name=WP_002215583.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215583.1;transl_table=11 NC_008149.1 RefSeq gene 4507386 4508006 . - . ID=gene4151;Name=YPN_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20785;old_locus_tag=YPN_3963 NC_008149.1 Protein Homology CDS 4507386 4508006 . - 0 ID=cds4052;Parent=gene4151;Dbxref=Genbank:WP_002215581.1;Name=WP_002215581.1;gbkey=CDS;product=membrane protein;protein_id=WP_002215581.1;transl_table=11 NC_008149.1 RefSeq gene 4508551 4509879 . - . ID=gene4152;Name=YPN_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20790;old_locus_tag=YPN_3964 NC_008149.1 Protein Homology CDS 4508551 4509879 . - 0 ID=cds4053;Parent=gene4152;Dbxref=Genbank:WP_002215577.1;Name=WP_002215577.1;Note=involved in the transport or adenine;gbkey=CDS;product=adenine permease;protein_id=WP_002215577.1;transl_table=11 NC_008149.1 RefSeq repeat_region 4510098 4510270 . + . ID=id363;gbkey=repeat_region NC_008149.1 RefSeq gene 4510372 4511040 . + . ID=gene4153;Name=YPN_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20795;old_locus_tag=YPN_3965 NC_008149.1 Protein Homology CDS 4510372 4511040 . + 0 ID=cds4054;Parent=gene4153;Dbxref=Genbank:WP_002215575.1;Name=WP_002215575.1;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=WP_002215575.1;transl_table=11 NC_008149.1 RefSeq gene 4511075 4511830 . - . ID=gene4154;Name=YPN_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20800;old_locus_tag=YPN_3966 NC_008149.1 Protein Homology CDS 4511075 4511830 . - 0 ID=cds4055;Parent=gene4154;Dbxref=Genbank:WP_002215573.1;Name=WP_002215573.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215573.1;transl_table=11 NC_008149.1 RefSeq gene 4511832 4512569 . - . ID=gene4155;Name=YPN_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20805;old_locus_tag=YPN_3967 NC_008149.1 Protein Homology CDS 4511832 4512569 . - 0 ID=cds4056;Parent=gene4155;Dbxref=Genbank:WP_002215571.1;Name=WP_002215571.1;gbkey=CDS;product=ABC transporter permease;protein_id=WP_002215571.1;transl_table=11 NC_008149.1 RefSeq gene 4512752 4513606 . - . ID=gene4156;Name=YPN_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20810;old_locus_tag=YPN_3968 NC_008149.1 Protein Homology CDS 4512752 4513606 . - 0 ID=cds4057;Parent=gene4156;Dbxref=Genbank:WP_002215568.1;Name=WP_002215568.1;gbkey=CDS;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002215568.1;transl_table=11 NC_008149.1 RefSeq gene 4513826 4514497 . - . ID=gene4157;Name=YPN_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20815;old_locus_tag=YPN_3969 NC_008149.1 Protein Homology CDS 4513826 4514497 . - 0 ID=cds4058;Parent=gene4157;Dbxref=Genbank:WP_002228151.1;Name=WP_002228151.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228151.1;transl_table=11 NC_008149.1 RefSeq gene 4514793 4515515 . - . ID=gene4158;Name=YPN_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20820;old_locus_tag=YPN_3970 NC_008149.1 Protein Homology CDS 4514793 4515515 . - 0 ID=cds4059;Parent=gene4158;Dbxref=Genbank:WP_002220747.1;Name=WP_002220747.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002220747.1;transl_table=11 NC_008149.1 RefSeq gene 4515603 4516379 . - . ID=gene4159;Name=YPN_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20825;old_locus_tag=YPN_3971 NC_008149.1 Protein Homology CDS 4515603 4516379 . - 0 ID=cds4060;Parent=gene4159;Dbxref=Genbank:WP_002215562.1;Name=WP_002215562.1;gbkey=CDS;product=phosphate import ATP-binding protein PstB 2;protein_id=WP_002215562.1;transl_table=11 NC_008149.1 RefSeq gene 4516460 4517347 . - . ID=gene4160;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=YPN_RS20830;old_locus_tag=YPN_3972 NC_008149.1 Protein Homology CDS 4516460 4517347 . - 0 ID=cds4061;Parent=gene4160;Dbxref=Genbank:WP_002215560.1;Name=WP_002215560.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate ABC transporter permease;protein_id=WP_002215560.1;transl_table=11 NC_008149.1 RefSeq gene 4517349 4518305 . - . ID=gene4161;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=YPN_RS20835;old_locus_tag=YPN_3973 NC_008149.1 Protein Homology CDS 4517349 4518305 . - 0 ID=cds4062;Parent=gene4161;Dbxref=Genbank:WP_002215558.1;Name=WP_002215558.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate transporter permease subunit PstC;protein_id=WP_002215558.1;transl_table=11 NC_008149.1 RefSeq gene 4518534 4519574 . - . ID=gene4162;Name=YPN_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20840;old_locus_tag=YPN_3974 NC_008149.1 Protein Homology CDS 4518534 4519574 . - 0 ID=cds4063;Parent=gene4162;Dbxref=Genbank:WP_002215557.1;Name=WP_002215557.1;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=WP_002215557.1;transl_table=11 NC_008149.1 RefSeq gene 4520057 4521886 . - . ID=gene4163;Name=YPN_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20845;old_locus_tag=YPN_3975 NC_008149.1 Protein Homology CDS 4520057 4521886 . - 0 ID=cds4064;Parent=gene4163;Dbxref=Genbank:WP_002215552.1;Name=WP_002215552.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glutamine--fructose-6-phosphate aminotransferase [isomerizing];protein_id=WP_002215552.1;transl_table=11 NC_008149.1 RefSeq gene 4522087 4523457 . - . ID=gene4164;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=YPN_RS20850;old_locus_tag=YPN_3976 NC_008149.1 Protein Homology CDS 4522087 4523457 . - 0 ID=cds4065;Parent=gene4164;Dbxref=Genbank:WP_002215550.1;Name=WP_002215550.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional protein GlmU;protein_id=WP_002215550.1;transl_table=11 NC_008149.1 RefSeq gene 4524078 4524500 . - . ID=gene4165;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=YPN_RS20855;old_locus_tag=YPN_3977 NC_008149.1 Protein Homology CDS 4524078 4524500 . - 0 ID=cds4066;Parent=gene4165;Dbxref=Genbank:WP_002215546.1;Name=WP_002215546.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase epsilon chain;protein_id=WP_002215546.1;transl_table=11 NC_008149.1 RefSeq gene 4524522 4525904 . - . ID=gene4166;Name=YPN_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20860;old_locus_tag=YPN_3978 NC_008149.1 Protein Homology CDS 4524522 4525904 . - 0 ID=cds4067;Parent=gene4166;Dbxref=Genbank:WP_002220753.1;Name=WP_002220753.1;gbkey=CDS;product=ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11 NC_008149.1 RefSeq gene 4526060 4526923 . - . ID=gene4167;Name=YPN_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20865;old_locus_tag=YPN_3979 NC_008149.1 Protein Homology CDS 4526060 4526923 . - 0 ID=cds4068;Parent=gene4167;Dbxref=Genbank:WP_002220756.1;Name=WP_002220756.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11 NC_008149.1 RefSeq gene 4526985 4528526 . - . ID=gene4168;Name=YPN_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20870;old_locus_tag=YPN_3980 NC_008149.1 Protein Homology CDS 4526985 4528526 . - 0 ID=cds4069;Parent=gene4168;Dbxref=Genbank:WP_002220758.1;Name=WP_002220758.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11 NC_008149.1 RefSeq gene 4528541 4529074 . - . ID=gene4169;Name=YPN_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20875;old_locus_tag=YPN_3981 NC_008149.1 Protein Homology CDS 4528541 4529074 . - 0 ID=cds4070;Parent=gene4169;Dbxref=Genbank:WP_002220760.1;Name=WP_002220760.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;product=ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11 NC_008149.1 RefSeq gene 4529089 4529559 . - . ID=gene4170;Name=YPN_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20880;old_locus_tag=YPN_3982 NC_008149.1 Protein Homology CDS 4529089 4529559 . - 0 ID=cds4071;Parent=gene4170;Dbxref=Genbank:WP_002220762.1;Name=WP_002220762.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;product=ATP synthase subunit b;protein_id=WP_002220762.1;transl_table=11 NC_008149.1 RefSeq gene 4529621 4529860 . - . ID=gene4171;Name=YPN_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20885;old_locus_tag=YPN_3983 NC_008149.1 Protein Homology CDS 4529621 4529860 . - 0 ID=cds4072;Parent=gene4171;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit c;protein_id=WP_000429386.1;transl_table=11 NC_008149.1 RefSeq gene 4529910 4530734 . - . ID=gene4172;Name=YPN_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20890;old_locus_tag=YPN_3984 NC_008149.1 Protein Homology CDS 4529910 4530734 . - 0 ID=cds4073;Parent=gene4172;Dbxref=Genbank:WP_002228150.1;Name=WP_002228150.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase subunit a;protein_id=WP_002228150.1;transl_table=11 NC_008149.1 RefSeq gene 4530774 4531157 . - . ID=gene4173;Name=YPN_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20895;old_locus_tag=YPN_3985 NC_008149.1 Protein Homology CDS 4530774 4531157 . - 0 ID=cds4074;Parent=gene4173;Dbxref=Genbank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11 NC_008149.1 RefSeq gene 4531824 4532444 . - . ID=gene4174;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=YPN_RS20900;old_locus_tag=YPN_3986 NC_008149.1 Protein Homology CDS 4531824 4532444 . - 0 ID=cds4075;Parent=gene4174;Dbxref=Genbank:WP_002212261.1;Name=WP_002212261.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=ribosomal RNA small subunit methyltransferase G;protein_id=WP_002212261.1;transl_table=11 NC_008149.1 RefSeq gene 4532590 4534479 . - . ID=gene4175;Name=YPN_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20905;old_locus_tag=YPN_3987 NC_008149.1 Protein Homology CDS 4532590 4534479 . - 0 ID=cds4076;Parent=gene4175;Dbxref=Genbank:WP_002212259.1;Name=WP_002212259.1;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;protein_id=WP_002212259.1;transl_table=11 ##sequence-region NC_008118.1 1 100918 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=377628 NC_008118.1 RefSeq region 1 100918 . + . ID=id364;Dbxref=taxon:377628;Is_circular=true;Name=pMT;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pMT;strain=Nepal516 NC_008118.1 RefSeq repeat_region 1 1954 . + . ID=id365;gbkey=repeat_region NC_008118.1 RefSeq gene 87 1109 . + . ID=gene4176;Name=YPN_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20915;old_locus_tag=YPN_MT0001 NC_008118.1 Protein Homology CDS 87 1109 . + 0 ID=cds4077;Parent=gene4176;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008118.1 RefSeq gene 1109 1888 . + . ID=gene4177;Name=YPN_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20920;old_locus_tag=YPN_MT0002 NC_008118.1 Protein Homology CDS 1109 1888 . + 0 ID=cds4078;Parent=gene4177;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008118.1 RefSeq gene 2022 2630 . - . ID=gene4178;Name=YPN_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20925;old_locus_tag=YPN_MT0003 NC_008118.1 Protein Homology CDS 2022 2630 . - 0 ID=cds4079;Parent=gene4178;Dbxref=Genbank:WP_002211769.1;Name=WP_002211769.1;gbkey=CDS;product=tail assembly protein;protein_id=WP_002211769.1;transl_table=11 NC_008118.1 RefSeq gene 2723 2935 . - . ID=gene4179;Name=YPN_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20930 NC_008118.1 Protein Homology CDS 2723 2935 . - 0 ID=cds4080;Parent=gene4179;Dbxref=Genbank:WP_002217458.1;Name=WP_002217458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002217458.1;transl_table=11 NC_008118.1 RefSeq gene 2932 5820 . - . ID=gene4180;Name=YPN_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20935;old_locus_tag=YPN_MT0004 NC_008118.1 Protein Homology CDS 2932 5820 . - 0 ID=cds4081;Parent=gene4180;Dbxref=Genbank:WP_002211770.1;Name=WP_002211770.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211770.1;transl_table=11 NC_008118.1 RefSeq gene 5901 6533 . - . ID=gene4181;Name=YPN_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20940;old_locus_tag=YPN_MT0005 NC_008118.1 Protein Homology CDS 5901 6533 . - 0 ID=cds4082;Parent=gene4181;Dbxref=Genbank:WP_002214116.1;Name=WP_002214116.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214116.1;transl_table=11 NC_008118.1 RefSeq gene 6536 11167 . - . ID=gene4182;Name=YPN_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20945;old_locus_tag=YPN_MT0006 NC_008118.1 Protein Homology CDS 6536 11167 . - 0 ID=cds4083;Parent=gene4182;Dbxref=Genbank:WP_002214118.1;Name=WP_002214118.1;gbkey=CDS;product=host specificity protein J;protein_id=WP_002214118.1;transl_table=11 NC_008118.1 RefSeq gene 11189 11776 . - . ID=gene4183;Name=YPN_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20950;old_locus_tag=YPN_MT0007 NC_008118.1 Protein Homology CDS 11189 11776 . - 0 ID=cds4084;Parent=gene4183;Dbxref=Genbank:WP_002211773.1;Name=WP_002211773.1;gbkey=CDS;product=phage tail protein;protein_id=WP_002211773.1;transl_table=11 NC_008118.1 RefSeq gene 11764 12561 . - . ID=gene4184;Name=YPN_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20955;old_locus_tag=YPN_MT0008 NC_008118.1 Protein Homology CDS 11764 12561 . - 0 ID=cds4085;Parent=gene4184;Dbxref=Genbank:WP_002211774.1;Name=WP_002211774.1;gbkey=CDS;product=tail protein;protein_id=WP_002211774.1;transl_table=11 NC_008118.1 RefSeq gene 12554 13252 . - . ID=gene4185;Name=YPN_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20960;old_locus_tag=YPN_MT0009 NC_008118.1 Protein Homology CDS 12554 13252 . - 0 ID=cds4086;Parent=gene4185;Dbxref=Genbank:WP_002211775.1;Name=WP_002211775.1;gbkey=CDS;product=tail protein;protein_id=WP_002211775.1;transl_table=11 NC_008118.1 RefSeq gene 13342 13677 . - . ID=gene4186;Name=YPN_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20965;old_locus_tag=YPN_MT0010 NC_008118.1 Protein Homology CDS 13342 13677 . - 0 ID=cds4087;Parent=gene4186;Dbxref=Genbank:WP_000440566.1;Name=WP_000440566.1;gbkey=CDS;product=tail protein;protein_id=WP_000440566.1;transl_table=11 NC_008118.1 RefSeq gene 13719 18296 . - . ID=gene4187;Name=YPN_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20970;old_locus_tag=YPN_MT0011 NC_008118.1 Protein Homology CDS 13719 18296 . - 0 ID=cds4088;Parent=gene4187;Dbxref=Genbank:WP_002211776.1;Name=WP_002211776.1;gbkey=CDS;product=phage tail tape measure protein;protein_id=WP_002211776.1;transl_table=11 NC_008118.1 RefSeq gene 18304 18537 . - . ID=gene4188;Name=YPN_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20975;old_locus_tag=YPN_MT0012 NC_008118.1 Protein Homology CDS 18304 18537 . - 0 ID=cds4089;Parent=gene4188;Dbxref=Genbank:WP_002211777.1;Name=WP_002211777.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211777.1;transl_table=11 NC_008118.1 RefSeq gene 18654 18971 . - . ID=gene4189;Name=YPN_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20980;old_locus_tag=YPN_MT0013 NC_008118.1 Protein Homology CDS 18654 18971 . - 0 ID=cds4090;Parent=gene4189;Dbxref=Genbank:WP_000163862.1;Name=WP_000163862.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000163862.1;transl_table=11 NC_008118.1 RefSeq gene 19031 19777 . - . ID=gene4190;Name=YPN_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20985;old_locus_tag=YPN_MT0014 NC_008118.1 Protein Homology CDS 19031 19777 . - 0 ID=cds4091;Parent=gene4190;Dbxref=Genbank:WP_002211778.1;Name=WP_002211778.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211778.1;transl_table=11 NC_008118.1 RefSeq gene 19852 20235 . - . ID=gene4191;Name=YPN_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20990;old_locus_tag=YPN_MT0015 NC_008118.1 Protein Homology CDS 19852 20235 . - 0 ID=cds4092;Parent=gene4191;Dbxref=Genbank:WP_002211779.1;Name=WP_002211779.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211779.1;transl_table=11 NC_008118.1 RefSeq gene 20237 20710 . - . ID=gene4192;Name=YPN_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS20995;old_locus_tag=YPN_MT0016 NC_008118.1 Protein Homology CDS 20237 20710 . - 0 ID=cds4093;Parent=gene4192;Dbxref=Genbank:WP_002211780.1;Name=WP_002211780.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211780.1;transl_table=11 NC_008118.1 RefSeq gene 20701 21045 . - . ID=gene4193;Name=YPN_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21000;old_locus_tag=YPN_MT0017 NC_008118.1 Protein Homology CDS 20701 21045 . - 0 ID=cds4094;Parent=gene4193;Dbxref=Genbank:WP_001027662.1;Name=WP_001027662.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_001027662.1;transl_table=11 NC_008118.1 RefSeq gene 21143 21976 . - . ID=gene4194;Name=YPN_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21005;old_locus_tag=YPN_MT0018 NC_008118.1 Protein Homology CDS 21143 21976 . - 0 ID=cds4095;Parent=gene4194;Dbxref=Genbank:WP_002211781.1;Name=WP_002211781.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211781.1;transl_table=11 NC_008118.1 RefSeq gene 21976 22410 . - . ID=gene4195;Name=YPN_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21010;old_locus_tag=YPN_MT0019 NC_008118.1 Protein Homology CDS 21976 22410 . - 0 ID=cds4096;Parent=gene4195;Dbxref=Genbank:WP_002211782.1;Name=WP_002211782.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211782.1;transl_table=11 NC_008118.1 RefSeq gene 22555 23046 . - . ID=gene4196;Name=YPN_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21555;old_locus_tag=YPN_MT0096 NC_008118.1 Protein Homology CDS 22555 23046 . - 0 ID=cds4097;Parent=gene4196;Dbxref=Genbank:WP_002228785.1;Name=WP_002228785.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228785.1;transl_table=11 NC_008118.1 RefSeq gene 23121 23996 . - . ID=gene4197;Name=YPN_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21020;old_locus_tag=YPN_MT0021 NC_008118.1 Protein Homology CDS 23121 23996 . - 0 ID=cds4098;Parent=gene4197;Dbxref=Genbank:WP_002211784.1;Name=WP_002211784.1;gbkey=CDS;product=phage capsid protein;protein_id=WP_002211784.1;transl_table=11 NC_008118.1 RefSeq gene 24023 24923 . - . ID=gene4198;Name=YPN_RS21025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPN_RS21025;pseudo=true NC_008118.1 Protein Homology CDS 24023 24923 . - 0 ID=cds4099;Parent=gene4198;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NC_008118.1 RefSeq gene 24946 26520 . - . ID=gene4199;Name=YPN_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21030;old_locus_tag=YPN_MT0024 NC_008118.1 Protein Homology CDS 24946 26520 . - 0 ID=cds4100;Parent=gene4199;Dbxref=Genbank:WP_002211786.1;Name=WP_002211786.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211786.1;transl_table=11 NC_008118.1 RefSeq gene 26554 27810 . - . ID=gene4200;Name=YPN_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21035;old_locus_tag=YPN_MT0025 NC_008118.1 Protein Homology CDS 26554 27810 . - 0 ID=cds4101;Parent=gene4200;Dbxref=Genbank:WP_002211787.1;Name=WP_002211787.1;gbkey=CDS;product=terminase;protein_id=WP_002211787.1;transl_table=11 NC_008118.1 RefSeq gene 27813 28454 . - . ID=gene4201;Name=YPN_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21040;old_locus_tag=YPN_MT0026 NC_008118.1 Protein Homology CDS 27813 28454 . - 0 ID=cds4102;Parent=gene4201;Dbxref=Genbank:WP_002211788.1;Name=WP_002211788.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002211788.1;transl_table=11 NC_008118.1 RefSeq gene 28650 28916 . - . ID=gene4202;Name=YPN_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21045;old_locus_tag=YPN_MT0027 NC_008118.1 Protein Homology CDS 28650 28916 . - 0 ID=cds4103;Parent=gene4202;Dbxref=Genbank:WP_000176291.1;Name=WP_000176291.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000176291.1;transl_table=11 NC_008118.1 RefSeq gene 28926 29816 . - . ID=gene4203;Name=YPN_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21050;old_locus_tag=YPN_MT0028 NC_008118.1 Protein Homology CDS 28926 29816 . - 0 ID=cds4104;Parent=gene4203;Dbxref=Genbank:WP_002211789.1;Name=WP_002211789.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211789.1;transl_table=11 NC_008118.1 RefSeq gene 29822 30076 . - . ID=gene4204;Name=YPN_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21055;old_locus_tag=YPN_MT0029 NC_008118.1 Protein Homology CDS 29822 30076 . - 0 ID=cds4105;Parent=gene4204;Dbxref=Genbank:WP_002211790.1;Name=WP_002211790.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211790.1;transl_table=11 NC_008118.1 RefSeq gene 30069 30707 . - . ID=gene4205;Name=YPN_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21060;old_locus_tag=YPN_MT0030 NC_008118.1 Protein Homology CDS 30069 30707 . - 0 ID=cds4106;Parent=gene4205;Dbxref=Genbank:WP_002211791.1;Name=WP_002211791.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211791.1;transl_table=11 NC_008118.1 RefSeq gene 30704 31372 . - . ID=gene4206;Name=YPN_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21065;old_locus_tag=YPN_MT0031 NC_008118.1 Protein Homology CDS 30704 31372 . - 0 ID=cds4107;Parent=gene4206;Dbxref=Genbank:WP_002211792.1;Name=WP_002211792.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002211792.1;transl_table=11 NC_008118.1 RefSeq gene 31372 32070 . - . ID=gene4207;Name=YPN_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21070;old_locus_tag=YPN_MT0032 NC_008118.1 Protein Homology CDS 31372 32070 . - 0 ID=cds4108;Parent=gene4207;Dbxref=Genbank:WP_002228791.1;Name=WP_002228791.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002228791.1;transl_table=11 NC_008118.1 RefSeq gene 32135 33694 . + . ID=gene4208;Name=YPN_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21075;old_locus_tag=YPN_MT0033 NC_008118.1 Protein Homology CDS 32135 33694 . + 0 ID=cds4109;Parent=gene4208;Dbxref=Genbank:WP_002211794.1;Name=WP_002211794.1;gbkey=CDS;product=helicase;protein_id=WP_002211794.1;transl_table=11 NC_008118.1 RefSeq gene 33697 33975 . + . ID=gene4209;Name=YPN_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21080;old_locus_tag=YPN_MT0034 NC_008118.1 Protein Homology CDS 33697 33975 . + 0 ID=cds4110;Parent=gene4209;Dbxref=Genbank:WP_002214131.1;Name=WP_002214131.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214131.1;transl_table=11 NC_008118.1 RefSeq gene 34035 34457 . + . ID=gene4210;Name=YPN_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21085;old_locus_tag=YPN_MT0035 NC_008118.1 Protein Homology CDS 34035 34457 . + 0 ID=cds4111;Parent=gene4210;Dbxref=Genbank:WP_002211796.1;Name=WP_002211796.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211796.1;transl_table=11 NC_008118.1 RefSeq gene 34462 34989 . + . ID=gene4211;Name=YPN_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21090;old_locus_tag=YPN_MT0036 NC_008118.1 Protein Homology CDS 34462 34989 . + 0 ID=cds4112;Parent=gene4211;Dbxref=Genbank:WP_002214134.1;Name=WP_002214134.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002214134.1;transl_table=11 NC_008118.1 RefSeq gene 35313 35963 . + . ID=gene4212;Name=YPN_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21095;old_locus_tag=YPN_MT0037 NC_008118.1 Protein Homology CDS 35313 35963 . + 0 ID=cds4113;Parent=gene4212;Dbxref=Genbank:WP_002211799.1;Name=WP_002211799.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211799.1;transl_table=11 NC_008118.1 RefSeq gene 36048 36275 . + . ID=gene4213;Name=YPN_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21100 NC_008118.1 Protein Homology CDS 36048 36275 . + 0 ID=cds4114;Parent=gene4213;Dbxref=Genbank:WP_002214137.1;Name=WP_002214137.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214137.1;transl_table=11 NC_008118.1 RefSeq gene 36576 36935 . + . ID=gene4214;Name=YPN_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21105 NC_008118.1 Protein Homology CDS 36576 36935 . + 0 ID=cds4115;Parent=gene4214;Dbxref=Genbank:WP_002214139.1;Name=WP_002214139.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214139.1;transl_table=11 NC_008118.1 RefSeq gene 36914 37396 . - . ID=gene4215;Name=YPN_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21110;old_locus_tag=YPN_MT0038 NC_008118.1 Protein Homology CDS 36914 37396 . - 0 ID=cds4116;Parent=gene4215;Dbxref=Genbank:WP_002211801.1;Name=WP_002211801.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211801.1;transl_table=11 NC_008118.1 RefSeq gene 37409 37585 . - . ID=gene4216;Name=YPN_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21115 NC_008118.1 Protein Homology CDS 37409 37585 . - 0 ID=cds4117;Parent=gene4216;Dbxref=Genbank:WP_002233073.1;Name=WP_002233073.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002233073.1;transl_table=11 NC_008118.1 RefSeq gene 37602 37883 . - . ID=gene4217;Name=YPN_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21120;old_locus_tag=YPN_MT0039 NC_008118.1 Protein Homology CDS 37602 37883 . - 0 ID=cds4118;Parent=gene4217;Dbxref=Genbank:WP_002211802.1;Name=WP_002211802.1;gbkey=CDS;product=ABC transporter;protein_id=WP_002211802.1;transl_table=11 NC_008118.1 RefSeq gene 38083 38541 . - . ID=gene4218;Name=YPN_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21125;old_locus_tag=YPN_MT0040 NC_008118.1 Protein Homology CDS 38083 38541 . - 0 ID=cds4119;Parent=gene4218;Dbxref=Genbank:WP_002213759.1;Name=WP_002213759.1;gbkey=CDS;product=transposase;protein_id=WP_002213759.1;transl_table=11 NC_008118.1 RefSeq gene 38551 38674 . - . ID=gene4219;Name=YPN_RS21560;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPN_RS21560 NC_008118.1 cmsearch ncRNA 38551 38674 . - . ID=rna93;Parent=gene4219;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA NC_008118.1 cmsearch exon 38551 38674 . - . ID=id366;Parent=rna93;gbkey=ncRNA;ncrna_class=other;product=Hfq binding sRNA NC_008118.1 RefSeq gene 38750 39319 . - . ID=gene4220;Name=YPN_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21130;old_locus_tag=YPN_MT0041 NC_008118.1 Protein Homology CDS 38750 39319 . - 0 ID=cds4120;Parent=gene4220;Dbxref=Genbank:WP_002214145.1;Name=WP_002214145.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214145.1;transl_table=11 NC_008118.1 RefSeq gene 39332 40078 . - . ID=gene4221;Name=YPN_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21135;old_locus_tag=YPN_MT0095 NC_008118.1 Protein Homology CDS 39332 40078 . - 0 ID=cds4121;Parent=gene4221;Dbxref=Genbank:WP_002213303.1;Name=WP_002213303.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213303.1;transl_table=11 NC_008118.1 RefSeq gene 40068 41984 . - . ID=gene4222;Name=YPN_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21140;old_locus_tag=YPN_MT0042 NC_008118.1 Protein Homology CDS 40068 41984 . - 0 ID=cds4122;Parent=gene4222;Dbxref=Genbank:WP_002214148.1;Name=WP_002214148.1;gbkey=CDS;product=exonuclease;protein_id=WP_002214148.1;transl_table=11 NC_008118.1 RefSeq gene 41993 42217 . - . ID=gene4223;Name=YPN_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21145 NC_008118.1 Protein Homology CDS 41993 42217 . - 0 ID=cds4123;Parent=gene4223;Dbxref=Genbank:WP_002228794.1;Name=WP_002228794.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228794.1;transl_table=11 NC_008118.1 RefSeq gene 42214 43299 . - . ID=gene4224;Name=YPN_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21150;old_locus_tag=YPN_MT0043 NC_008118.1 Protein Homology CDS 42214 43299 . - 0 ID=cds4124;Parent=gene4224;Dbxref=Genbank:WP_002213300.1;Name=WP_002213300.1;gbkey=CDS;product=exonuclease;protein_id=WP_002213300.1;transl_table=11 NC_008118.1 RefSeq gene 43448 43636 . + . ID=gene4225;Name=YPN_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21155 NC_008118.1 Protein Homology CDS 43448 43636 . + 0 ID=cds4125;Parent=gene4225;Dbxref=Genbank:WP_002214154.1;Name=WP_002214154.1;gbkey=CDS;product=membrane protein;protein_id=WP_002214154.1;transl_table=11 NC_008118.1 RefSeq gene 43715 44737 . + . ID=gene4226;Name=YPN_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21160;old_locus_tag=YPN_MT0044 NC_008118.1 Protein Homology CDS 43715 44737 . + 0 ID=cds4126;Parent=gene4226;Dbxref=Genbank:WP_002213298.1;Name=WP_002213298.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213298.1;transl_table=11 NC_008118.1 RefSeq gene 44875 45021 . - . ID=gene4227;Name=YPN_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21165 NC_008118.1 Protein Homology CDS 44875 45021 . - 0 ID=cds4127;Parent=gene4227;Dbxref=Genbank:WP_002214158.1;Name=WP_002214158.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214158.1;transl_table=11 NC_008118.1 RefSeq gene 45097 45741 . - . ID=gene4228;Name=YPN_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21170;old_locus_tag=YPN_MT0045 NC_008118.1 Protein Homology CDS 45097 45741 . - 0 ID=cds4128;Parent=gene4228;Dbxref=Genbank:WP_002214160.1;Name=WP_002214160.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002214160.1;transl_table=11 NC_008118.1 RefSeq gene 46486 47550 . + . ID=gene4229;Name=YPN_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21175;old_locus_tag=YPN_MT0046 NC_008118.1 Protein Homology CDS 46486 47550 . + 0 ID=cds4129;Parent=gene4229;Dbxref=Genbank:WP_002214164.1;Name=WP_002214164.1;gbkey=CDS;product=replication protein RepA;protein_id=WP_002214164.1;transl_table=11 NC_008118.1 RefSeq gene 48119 48331 . - . ID=gene4230;Name=YPN_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21180;old_locus_tag=YPN_MT0097 NC_008118.1 Protein Homology CDS 48119 48331 . - 0 ID=cds4130;Parent=gene4230;Dbxref=Genbank:WP_025471023.1;Name=WP_025471023.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_025471023.1;transl_table=11 NC_008118.1 RefSeq gene 48331 48666 . - . ID=gene4231;Name=YPN_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21185;old_locus_tag=YPN_MT0047 NC_008118.1 Protein Homology CDS 48331 48666 . - 0 ID=cds4131;Parent=gene4231;Dbxref=Genbank:WP_002227818.1;Name=WP_002227818.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002227818.1;transl_table=11 NC_008118.1 RefSeq gene 48663 48842 . - . ID=gene4232;Name=YPN_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21190;old_locus_tag=YPN_MT0098 NC_008118.1 Protein Homology CDS 48663 48842 . - 0 ID=cds4132;Parent=gene4232;Dbxref=Genbank:WP_002228796.1;Name=WP_002228796.1;gbkey=CDS;product=membrane protein;protein_id=WP_002228796.1;transl_table=11 NC_008118.1 RefSeq gene 48883 49158 . - . ID=gene4233;Name=YPN_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21195;old_locus_tag=YPN_MT0048 NC_008118.1 Protein Homology CDS 48883 49158 . - 0 ID=cds4133;Parent=gene4233;Dbxref=Genbank:WP_002228797.1;Name=WP_002228797.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228797.1;transl_table=11 NC_008118.1 RefSeq gene 49226 49636 . - . ID=gene4234;Name=YPN_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21200;old_locus_tag=YPN_MT0049 NC_008118.1 Protein Homology CDS 49226 49636 . - 0 ID=cds4134;Parent=gene4234;Dbxref=Genbank:WP_002222869.1;Name=WP_002222869.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222869.1;transl_table=11 NC_008118.1 RefSeq gene 49620 49991 . - . ID=gene4235;Name=YPN_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21205;old_locus_tag=YPN_MT0050 NC_008118.1 Protein Homology CDS 49620 49991 . - 0 ID=cds4135;Parent=gene4235;Dbxref=Genbank:WP_002222868.1;Name=WP_002222868.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222868.1;transl_table=11 NC_008118.1 RefSeq gene 50145 50975 . - . ID=gene4236;Name=YPN_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21210;old_locus_tag=YPN_MT0051 NC_008118.1 Protein Homology CDS 50145 50975 . - 0 ID=cds4136;Parent=gene4236;Dbxref=Genbank:WP_002222866.1;Name=WP_002222866.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002222866.1;transl_table=11 NC_008118.1 RefSeq gene 50979 51179 . - . ID=gene4237;Name=YPN_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21215;old_locus_tag=YPN_MT0099 NC_008118.1 Protein Homology CDS 50979 51179 . - 0 ID=cds4137;Parent=gene4237;Dbxref=Genbank:WP_002213439.1;Name=WP_002213439.1;gbkey=CDS;product=membrane protein;protein_id=WP_002213439.1;transl_table=11 NC_008118.1 RefSeq gene 51270 52346 . - . ID=gene4238;Name=YPN_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21220;old_locus_tag=YPN_MT0052 NC_008118.1 Protein Homology CDS 51270 52346 . - 0 ID=cds4138;Parent=gene4238;Dbxref=Genbank:WP_002213437.1;Name=WP_002213437.1;gbkey=CDS;product=recombinase;protein_id=WP_002213437.1;transl_table=11 NC_008118.1 RefSeq gene 52349 52615 . - . ID=gene4239;Name=YPN_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21225;old_locus_tag=YPN_MT0053 NC_008118.1 Protein Homology CDS 52349 52615 . - 0 ID=cds4139;Parent=gene4239;Dbxref=Genbank:WP_000920226.1;Name=WP_000920226.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_000920226.1;transl_table=11 NC_008118.1 RefSeq gene 52615 53559 . - . ID=gene4240;Name=YPN_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21230;old_locus_tag=YPN_MT0054 NC_008118.1 Protein Homology CDS 52615 53559 . - 0 ID=cds4140;Parent=gene4240;Dbxref=Genbank:WP_002225551.1;Name=WP_002225551.1;gbkey=CDS;product=exonuclease;protein_id=WP_002225551.1;transl_table=11 NC_008118.1 RefSeq gene 53620 54648 . - . ID=gene4241;Name=YPN_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21235;old_locus_tag=YPN_MT0055 NC_008118.1 Protein Homology CDS 53620 54648 . - 0 ID=cds4141;Parent=gene4241;Dbxref=Genbank:WP_002213132.1;Name=WP_002213132.1;gbkey=CDS;product=regulator;protein_id=WP_002213132.1;transl_table=11 NC_008118.1 RefSeq gene 54768 55199 . - . ID=gene4242;Name=YPN_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21240;old_locus_tag=YPN_MT0056 NC_008118.1 Protein Homology CDS 54768 55199 . - 0 ID=cds4142;Parent=gene4242;Dbxref=Genbank:WP_011114024.1;Name=WP_011114024.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_011114024.1;transl_table=11 NC_008118.1 RefSeq gene 55420 55671 . + . ID=gene4243;Name=YPN_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21245 NC_008118.1 Protein Homology CDS 55420 55671 . + 0 ID=cds4143;Parent=gene4243;Dbxref=Genbank:WP_002215095.1;Name=WP_002215095.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215095.1;transl_table=11 NC_008118.1 RefSeq gene 55744 56307 . + . ID=gene4244;Name=YPN_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21250;old_locus_tag=YPN_MT0057 NC_008118.1 Protein Homology CDS 55744 56307 . + 0 ID=cds4144;Parent=gene4244;Dbxref=Genbank:WP_002213141.1;Name=WP_002213141.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002213141.1;transl_table=11 NC_008118.1 RefSeq gene 56337 56780 . - . ID=gene4245;Name=YPN_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21255;old_locus_tag=YPN_MT0058 NC_008118.1 Protein Homology CDS 56337 56780 . - 0 ID=cds4145;Parent=gene4245;Dbxref=Genbank:WP_002213143.1;Name=WP_002213143.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213143.1;transl_table=11 NC_008118.1 RefSeq gene 56777 60301 . - . ID=gene4246;Name=YPN_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21260;old_locus_tag=YPN_MT0059 NC_008118.1 Protein Homology CDS 56777 60301 . - 0 ID=cds4146;Parent=gene4246;Dbxref=Genbank:WP_002221186.1;Name=WP_002221186.1;gbkey=CDS;product=DNA polymerase III subunit alpha;protein_id=WP_002221186.1;transl_table=11 NC_008118.1 RefSeq gene 60482 61717 . - . ID=gene4247;Name=YPN_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21265;old_locus_tag=YPN_MT0060 NC_008118.1 Protein Homology CDS 60482 61717 . - 0 ID=cds4147;Parent=gene4247;Dbxref=Genbank:WP_002211767.1;Name=WP_002211767.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211767.1;transl_table=11 NC_008118.1 RefSeq gene 61814 64180 . - . ID=gene4248;Name=YPN_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21270;old_locus_tag=YPN_MT0061 NC_008118.1 Protein Homology CDS 61814 64180 . - 0 ID=cds4148;Parent=gene4248;Dbxref=Genbank:WP_002211766.1;Name=WP_002211766.1;gbkey=CDS;product=porphyrin biosynthesis protein;protein_id=WP_002211766.1;transl_table=11 NC_008118.1 RefSeq gene 64290 64502 . - . ID=gene4249;Name=YPN_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21275;old_locus_tag=YPN_MT0062 NC_008118.1 Protein Homology CDS 64290 64502 . - 0 ID=cds4149;Parent=gene4249;Dbxref=Genbank:WP_002228800.1;Name=WP_002228800.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228800.1;transl_table=11 NC_008118.1 RefSeq gene 64765 65151 . + . ID=gene4250;Name=YPN_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21280;old_locus_tag=YPN_MT0064 NC_008118.1 Protein Homology CDS 64765 65151 . + 0 ID=cds4150;Parent=gene4250;Dbxref=Genbank:WP_002228802.1;Name=WP_002228802.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228802.1;transl_table=11 NC_008118.1 RefSeq gene 65146 66249 . - . ID=gene4251;Name=YPN_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21285;old_locus_tag=YPN_MT0063 NC_008118.1 Protein Homology CDS 65146 66249 . - 0 ID=cds4151;Parent=gene4251;Dbxref=Genbank:WP_002353208.1;Name=WP_002353208.1;gbkey=CDS;product=integrase;protein_id=WP_002353208.1;transl_table=11 NC_008118.1 RefSeq gene 67009 67521 . - . ID=gene4252;Name=YPN_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21290;old_locus_tag=YPN_MT0100 NC_008118.1 Protein Homology CDS 67009 67521 . - 0 ID=cds4152;Parent=gene4252;Dbxref=Genbank:WP_002216410.1;Name=WP_002216410.1;gbkey=CDS;product=F1 capsule antigen;protein_id=WP_002216410.1;transl_table=11 NC_008118.1 RefSeq gene 67602 70103 . - . ID=gene4253;Name=YPN_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21295;old_locus_tag=YPN_MT0065 NC_008118.1 Protein Homology CDS 67602 70103 . - 0 ID=cds4153;Parent=gene4253;Dbxref=Genbank:WP_002211763.1;Name=WP_002211763.1;gbkey=CDS;product=F1 capsule-anchoring protein;protein_id=WP_002211763.1;transl_table=11 NC_008118.1 RefSeq gene 70128 70904 . - . ID=gene4254;Name=YPN_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21300;old_locus_tag=YPN_MT0066 NC_008118.1 Protein Homology CDS 70128 70904 . - 0 ID=cds4154;Parent=gene4254;Dbxref=Genbank:WP_002228804.1;Name=WP_002228804.1;gbkey=CDS;product=chaperone protein caf1M;protein_id=WP_002228804.1;transl_table=11 NC_008118.1 RefSeq gene 71232 72137 . + . ID=gene4255;Name=YPN_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21305;old_locus_tag=YPN_MT0101 NC_008118.1 Protein Homology CDS 71232 72137 . + 0 ID=cds4155;Parent=gene4255;Dbxref=Genbank:WP_002211761.1;Name=WP_002211761.1;gbkey=CDS;product=F1 operon positive regulatory protein;protein_id=WP_002211761.1;transl_table=11 NC_008118.1 RefSeq gene 72652 72957 . - . ID=gene4256;Name=YPN_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21310;old_locus_tag=YPN_MT0067 NC_008118.1 Protein Homology CDS 72652 72957 . - 0 ID=cds4156;Parent=gene4256;Dbxref=Genbank:WP_002224363.1;Name=WP_002224363.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224363.1;transl_table=11 NC_008118.1 RefSeq gene 73103 73318 . - . ID=gene4257;Name=YPN_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21315;old_locus_tag=YPN_MT0068 NC_008118.1 Protein Homology CDS 73103 73318 . - 0 ID=cds4157;Parent=gene4257;Dbxref=Genbank:WP_002224361.1;Name=WP_002224361.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224361.1;transl_table=11 NC_008118.1 RefSeq gene 73478 74515 . - . ID=gene4258;Name=YPN_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21320;old_locus_tag=YPN_MT0069 NC_008118.1 Protein Homology CDS 73478 74515 . - 0 ID=cds4158;Parent=gene4258;Dbxref=Genbank:WP_002233024.1;Name=WP_002233024.1;gbkey=CDS;product=DNA ligase;protein_id=WP_002233024.1;transl_table=11 NC_008118.1 RefSeq repeat_region 74525 76478 . + . ID=id367;gbkey=repeat_region NC_008118.1 RefSeq gene 74591 75370 . - . ID=gene4259;Name=YPN_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21325;old_locus_tag=YPN_MT0070 NC_008118.1 Protein Homology CDS 74591 75370 . - 0 ID=cds4159;Parent=gene4259;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008118.1 RefSeq gene 75370 76392 . - . ID=gene4260;Name=YPN_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21330;old_locus_tag=YPN_MT0071 NC_008118.1 Protein Homology CDS 75370 76392 . - 0 ID=cds4160;Parent=gene4260;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008118.1 RefSeq gene 76406 76759 . - . ID=gene4261;Name=YPN_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21335;old_locus_tag=YPN_MT0072 NC_008118.1 Protein Homology CDS 76406 76759 . - 0 ID=cds4161;Parent=gene4261;Dbxref=Genbank:WP_002225465.1;Name=WP_002225465.1;gbkey=CDS;product=DNA ligase;protein_id=WP_002225465.1;transl_table=11 NC_008118.1 RefSeq gene 76794 77051 . - . ID=gene4262;Name=YPN_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21340 NC_008118.1 Protein Homology CDS 76794 77051 . - 0 ID=cds4162;Parent=gene4262;Dbxref=Genbank:WP_002224267.1;Name=WP_002224267.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224267.1;transl_table=11 NC_008118.1 RefSeq gene 77352 78146 . - . ID=gene4263;Name=YPN_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21345;old_locus_tag=YPN_MT0074 NC_008118.1 Protein Homology CDS 77352 78146 . - 0 ID=cds4163;Parent=gene4263;Dbxref=Genbank:WP_002224265.1;Name=WP_002224265.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224265.1;transl_table=11 NC_008118.1 RefSeq gene 78399 79121 . + . ID=gene4264;Name=YPN_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21350;old_locus_tag=YPN_MT0102 NC_008118.1 Protein Homology CDS 78399 79121 . + 0 ID=cds4164;Parent=gene4264;Dbxref=Genbank:WP_002224263.1;Name=WP_002224263.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002224263.1;transl_table=11 NC_008118.1 RefSeq gene 79155 80363 . + . ID=gene4265;Name=YPN_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21355;old_locus_tag=YPN_MT0075 NC_008118.1 Protein Homology CDS 79155 80363 . + 0 ID=cds4165;Parent=gene4265;Dbxref=Genbank:WP_002209743.1;Name=WP_002209743.1;gbkey=CDS;product=transposase;protein_id=WP_002209743.1;transl_table=11 NC_008118.1 RefSeq gene 80493 80672 . + . ID=gene4266;Name=YPN_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21360 NC_008118.1 Protein Homology CDS 80493 80672 . + 0 ID=cds4166;Parent=gene4266;Dbxref=Genbank:WP_002216419.1;Name=WP_002216419.1;gbkey=CDS;product=DNA helicase;protein_id=WP_002216419.1;transl_table=11 NC_008118.1 RefSeq gene 80832 81854 . + . ID=gene4267;Name=YPN_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21365;old_locus_tag=YPN_MT0076 NC_008118.1 Protein Homology CDS 80832 81854 . + 0 ID=cds4167;Parent=gene4267;Dbxref=Genbank:WP_002211760.1;Name=WP_002211760.1;gbkey=CDS;product=transposase;protein_id=WP_002211760.1;transl_table=11 NC_008118.1 RefSeq gene 82053 82370 . - . ID=gene4268;Name=YPN_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21370;old_locus_tag=YPN_MT0077 NC_008118.1 Protein Homology CDS 82053 82370 . - 0 ID=cds4168;Parent=gene4268;Dbxref=Genbank:WP_002216421.1;Name=WP_002216421.1;gbkey=CDS;product=transposase;protein_id=WP_002216421.1;transl_table=11 NC_008118.1 RefSeq gene 82550 82921 . - . ID=gene4269;Name=YPN_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21375 NC_008118.1 Protein Homology CDS 82550 82921 . - 0 ID=cds4169;Parent=gene4269;Dbxref=Genbank:WP_002228772.1;Name=WP_002228772.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228772.1;transl_table=11 NC_008118.1 RefSeq gene 82836 83144 . - . ID=gene4270;Name=YPN_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21380 NC_008118.1 Protein Homology CDS 82836 83144 . - 0 ID=cds4170;Parent=gene4270;Dbxref=Genbank:WP_002228773.1;Name=WP_002228773.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002228773.1;transl_table=11 NC_008118.1 RefSeq gene 83230 83685 . + . ID=gene4271;Name=YPN_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21385;old_locus_tag=YPN_MT0078 NC_008118.1 Protein Homology CDS 83230 83685 . + 0 ID=cds4171;Parent=gene4271;Dbxref=Genbank:WP_002353217.1;Name=WP_002353217.1;gbkey=CDS;product=reverse transcriptase;protein_id=WP_002353217.1;transl_table=11 NC_008118.1 RefSeq gene 83930 85693 . - . ID=gene4272;Name=YPN_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21390;old_locus_tag=YPN_MT0079 NC_008118.1 Protein Homology CDS 83930 85693 . - 0 ID=cds4172;Parent=gene4272;Dbxref=Genbank:WP_002211758.1;Name=WP_002211758.1;gbkey=CDS;product=phospholipase D;protein_id=WP_002211758.1;transl_table=11 NC_008118.1 RefSeq gene 85771 86259 . - . ID=gene4273;Name=YPN_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21395;old_locus_tag=YPN_MT0080 NC_008118.1 Protein Homology CDS 85771 86259 . - 0 ID=cds4173;Parent=gene4273;Dbxref=Genbank:WP_002211757.1;Name=WP_002211757.1;gbkey=CDS;product=phospholipase D;protein_id=WP_002211757.1;transl_table=11 NC_008118.1 RefSeq gene 86998 87273 . + . ID=gene4274;Name=YPN_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21400;old_locus_tag=YPN_MT0081 NC_008118.1 Protein Homology CDS 86998 87273 . + 0 ID=cds4174;Parent=gene4274;Dbxref=Genbank:WP_002211756.1;Name=WP_002211756.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211756.1;transl_table=11 NC_008118.1 RefSeq gene 87296 88237 . - . ID=gene4275;Name=YPN_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21405;old_locus_tag=YPN_MT0082 NC_008118.1 Protein Homology CDS 87296 88237 . - 0 ID=cds4175;Parent=gene4275;Dbxref=Genbank:WP_002215065.1;Name=WP_002215065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215065.1;transl_table=11 NC_008118.1 RefSeq gene 88303 88923 . - . ID=gene4276;Name=YPN_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21410;old_locus_tag=YPN_MT0083 NC_008118.1 Protein Homology CDS 88303 88923 . - 0 ID=cds4176;Parent=gene4276;Dbxref=Genbank:WP_002211754.1;Name=WP_002211754.1;gbkey=CDS;product=serine recombinase;protein_id=WP_002211754.1;transl_table=11 NC_008118.1 RefSeq gene 89123 89449 . - . ID=gene4277;Name=YPN_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21415 NC_008118.1 Protein Homology CDS 89123 89449 . - 0 ID=cds4177;Parent=gene4277;Dbxref=Genbank:WP_002215068.1;Name=WP_002215068.1;gbkey=CDS;product=plasmid stabilization protein;protein_id=WP_002215068.1;transl_table=11 NC_008118.1 RefSeq gene 89449 89676 . - . ID=gene4278;Name=YPN_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21420;old_locus_tag=YPN_MT0084 NC_008118.1 Protein Homology CDS 89449 89676 . - 0 ID=cds4178;Parent=gene4278;Dbxref=Genbank:WP_002211753.1;Name=WP_002211753.1;gbkey=CDS;product=prevent-host-death protein;protein_id=WP_002211753.1;transl_table=11 NC_008118.1 RefSeq gene 89978 91183 . + . ID=gene4279;Name=YPN_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21425;old_locus_tag=YPN_MT0085 NC_008118.1 Protein Homology CDS 89978 91183 . + 0 ID=cds4179;Parent=gene4279;Dbxref=Genbank:WP_002211752.1;Name=WP_002211752.1;gbkey=CDS;product=chromosome partitioning protein ParA;protein_id=WP_002211752.1;transl_table=11 NC_008118.1 RefSeq gene 91180 92151 . + . ID=gene4280;Name=YPN_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21430;old_locus_tag=YPN_MT0086 NC_008118.1 Protein Homology CDS 91180 92151 . + 0 ID=cds4180;Parent=gene4280;Dbxref=Genbank:WP_002215070.1;Name=WP_002215070.1;gbkey=CDS;product=chromosome partitioning protein ParB;protein_id=WP_002215070.1;transl_table=11 NC_008118.1 RefSeq gene 92530 93927 . + . ID=gene4281;Name=YPN_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21435;old_locus_tag=YPN_MT0087 NC_008118.1 Protein Homology CDS 92530 93927 . + 0 ID=cds4181;Parent=gene4281;Dbxref=Genbank:WP_002228775.1;Name=WP_002228775.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_002228775.1;transl_table=11 NC_008118.1 RefSeq gene 94089 94289 . - . ID=gene4282;Name=YPN_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21440;old_locus_tag=YPN_MT0104 NC_008118.1 Protein Homology CDS 94089 94289 . - 0 ID=cds4182;Parent=gene4282;Dbxref=Genbank:WP_002211750.1;Name=WP_002211750.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211750.1;transl_table=11 NC_008118.1 RefSeq gene 94790 95467 . + . ID=gene4283;Name=YPN_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21445;old_locus_tag=YPN_MT0088 NC_008118.1 Protein Homology CDS 94790 95467 . + 0 ID=cds4183;Parent=gene4283;Dbxref=Genbank:WP_002211749.1;Name=WP_002211749.1;gbkey=CDS;product=methylase;protein_id=WP_002211749.1;transl_table=11 NC_008118.1 RefSeq gene 95467 95688 . + . ID=gene4284;Name=YPN_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21450;old_locus_tag=YPN_MT0089 NC_008118.1 Protein Homology CDS 95467 95688 . + 0 ID=cds4184;Parent=gene4284;Dbxref=Genbank:WP_002211748.1;Name=WP_002211748.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211748.1;transl_table=11 NC_008118.1 RefSeq gene 95699 96118 . + . ID=gene4285;Name=YPN_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21455;old_locus_tag=YPN_MT0090 NC_008118.1 Protein Homology CDS 95699 96118 . + 0 ID=cds4185;Parent=gene4285;Dbxref=Genbank:WP_002215082.1;Name=WP_002215082.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002215082.1;transl_table=11 NC_008118.1 RefSeq gene 96172 96951 . + . ID=gene4286;Name=YPN_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21460;old_locus_tag=YPN_MT0091 NC_008118.1 Protein Homology CDS 96172 96951 . + 0 ID=cds4186;Parent=gene4286;Dbxref=Genbank:WP_002211747.1;Name=WP_002211747.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211747.1;transl_table=11 NC_008118.1 RefSeq gene 97350 97856 . + . ID=gene4287;Name=YPN_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21465;old_locus_tag=YPN_MT0092 NC_008118.1 Protein Homology CDS 97350 97856 . + 0 ID=cds4187;Parent=gene4287;Dbxref=Genbank:WP_002211746.1;Name=WP_002211746.1;gbkey=CDS;product=antirestriction protein;protein_id=WP_002211746.1;transl_table=11 NC_008118.1 RefSeq gene 98569 98799 . + . ID=gene4288;Name=YPN_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21470;old_locus_tag=YPN_MT0093 NC_008118.1 Protein Homology CDS 98569 98799 . + 0 ID=cds4188;Parent=gene4288;Dbxref=Genbank:WP_002211745.1;Name=WP_002211745.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211745.1;transl_table=11 NC_008118.1 RefSeq gene 98872 100881 . + . ID=gene4289;Name=YPN_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21475;old_locus_tag=YPN_MT0094 NC_008118.1 Protein Homology CDS 98872 100881 . + 0 ID=cds4189;Parent=gene4289;Dbxref=Genbank:WP_002211744.1;Name=WP_002211744.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002211744.1;transl_table=11 ##sequence-region NC_008119.1 1 10778 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=377628 NC_008119.1 RefSeq region 1 10778 . + . ID=id368;Dbxref=taxon:377628;Is_circular=true;Name=pPCP;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pPCP;strain=Nepal516 NC_008119.1 RefSeq gene 81 1103 . + . ID=gene4290;Name=YPN_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21485;old_locus_tag=YPN_PCP0001 NC_008119.1 Protein Homology CDS 81 1103 . + 0 ID=cds4190;Parent=gene4290;Dbxref=Genbank:WP_000255944.1;Name=WP_000255944.1;gbkey=CDS;product=transposase;protein_id=WP_000255944.1;transl_table=11 NC_008119.1 RefSeq gene 1103 1882 . + . ID=gene4291;Name=YPN_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21490;old_locus_tag=YPN_PCP0002 NC_008119.1 Protein Homology CDS 1103 1882 . + 0 ID=cds4191;Parent=gene4291;Dbxref=Genbank:WP_001297096.1;Name=WP_001297096.1;gbkey=CDS;product=transposase;protein_id=WP_001297096.1;transl_table=11 NC_008119.1 RefSeq repeat_region 1950 4283 . + . ID=id369;gbkey=repeat_region NC_008119.1 RefSeq gene 2919 3113 . + . ID=gene4292;Name=YPN_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21495;old_locus_tag=YPN_PCP0008 NC_008119.1 Protein Homology CDS 2919 3113 . + 0 ID=cds4192;Parent=gene4292;Dbxref=Genbank:WP_002213433.1;Name=WP_002213433.1;gbkey=CDS;product=rop protein;protein_id=WP_002213433.1;transl_table=11 NC_008119.1 RefSeq gene 4086 4280 . + . ID=gene4293;Name=YPN_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21500;old_locus_tag=YPN_PCP0009 NC_008119.1 Protein Homology CDS 4086 4280 . + 0 ID=cds4193;Parent=gene4293;Dbxref=Genbank:WP_002213433.1;Name=WP_002213433.1;gbkey=CDS;product=rop protein;protein_id=WP_002213433.1;transl_table=11 NC_008119.1 RefSeq gene 5516 5941 . + . ID=gene4294;Name=YPN_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21505 NC_008119.1 Protein Homology CDS 5516 5941 . + 0 ID=cds4194;Parent=gene4294;Dbxref=Genbank:WP_002218512.1;Name=WP_002218512.1;gbkey=CDS;product=pesticin immunity protein;protein_id=WP_002218512.1;transl_table=11 NC_008119.1 RefSeq gene 5976 7049 . - . ID=gene4295;Name=YPN_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21510;old_locus_tag=YPN_PCP0003 NC_008119.1 Protein Homology CDS 5976 7049 . - 0 ID=cds4195;Parent=gene4295;Dbxref=Genbank:WP_002218509.1;Name=WP_002218509.1;gbkey=CDS;product=peptidase;protein_id=WP_002218509.1;transl_table=11 NC_008119.1 RefSeq gene 7279 7584 . + . ID=gene4296;Name=YPN_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21515;old_locus_tag=YPN_PCP0004 NC_008119.1 Protein Homology CDS 7279 7584 . + 0 ID=cds4196;Parent=gene4296;Dbxref=Genbank:WP_002221218.1;Name=WP_002221218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002221218.1;transl_table=11 NC_008119.1 RefSeq gene 7827 8765 . + . ID=gene4297;Name=YPN_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21520;old_locus_tag=YPN_PCP0005 NC_008119.1 Protein Homology CDS 7827 8765 . + 0 ID=cds4197;Parent=gene4297;Dbxref=Genbank:WP_002218234.1;Name=WP_002218234.1;gbkey=CDS;product=coagulase/fibrinolysin;protein_id=WP_002218234.1;transl_table=11 NC_008119.1 RefSeq gene 8952 9251 . - . ID=gene4298;Name=YPN_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21525;old_locus_tag=YPN_PCP0006 NC_008119.1 Protein Homology CDS 8952 9251 . - 0 ID=cds4198;Parent=gene4298;Dbxref=Genbank:WP_002213446.1;Name=WP_002213446.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_002213446.1;transl_table=11 NC_008119.1 RefSeq gene 9251 9592 . - . ID=gene4299;Name=YPN_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21530;old_locus_tag=YPN_PCP0007 NC_008119.1 Protein Homology CDS 9251 9592 . - 0 ID=cds4199;Parent=gene4299;Dbxref=Genbank:WP_002225538.1;Name=WP_002225538.1;gbkey=CDS;product=toxin RelE;protein_id=WP_002225538.1;transl_table=11 NC_008119.1 RefSeq gene 10295 10510 . - . ID=gene4300;Name=YPN_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPN_RS21535 NC_008119.1 Protein Homology CDS 10295 10510 . - 0 ID=cds4200;Parent=gene4300;Dbxref=Genbank:WP_002213461.1;Name=WP_002213461.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_002213461.1;transl_table=11 ###