YPDSF_RS00005 PF00308 Bacterial dnaA protein YPDSF_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix YPDSF_RS00005 PF11638 DnaA N-terminal domain YPDSF_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain YPDSF_RS00010 PF02767 DNA polymerase III beta subunit, central domain YPDSF_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain YPDSF_RS00020 PF02463 RecF/RecN/SMC N terminal domain YPDSF_RS00025 PF00204 DNA gyrase B YPDSF_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus YPDSF_RS00025 PF01751 Toprim domain YPDSF_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS00030 PF08282 haloacid dehalogenase-like hydrolase YPDSF_RS00035 PF00665 Integrase core domain YPDSF_RS00035 PF13276 YPDSF_RS00035 YPDSF_RS00040 PF13518 Helix-turn-helix domain YPDSF_RS00045 PF02423 Ornithine cyclodeaminase/mu-crystallin family YPDSF_RS00050 PF00291 Pyridoxal-phosphate dependent enzyme YPDSF_RS00060 PF07676 WD40-like Beta Propeller Repeat YPDSF_RS00065 PF07119 YPDSF_RS00065 YPDSF_RS00070 PF00011 Hsp20/alpha crystallin family YPDSF_RS00075 PF00011 Hsp20/alpha crystallin family YPDSF_RS00080 PF02080 TrkA-C domain YPDSF_RS00080 PF06826 YPDSF_RS00080 YPDSF_RS00085 PF00155 Aminotransferase class I and II YPDSF_RS00095 PF00128 Alpha amylase, catalytic domain YPDSF_RS00100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPDSF_RS00100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPDSF_RS00110 PF00691 OmpA family YPDSF_RS00110 PF13488 YPDSF_RS00110 YPDSF_RS00115 PF13673 Acetyltransferase (GNAT) domain YPDSF_RS00120 PF03352 Methyladenine glycosylase YPDSF_RS00125 PF02091 Glycyl-tRNA synthetase alpha subunit YPDSF_RS00130 PF02092 YPDSF_RS00130 YPDSF_RS00130 PF05746 DALR anticodon binding domain YPDSF_RS00135 PF11254 YPDSF_RS00135 YPDSF_RS00140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPDSF_RS00140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPDSF_RS00140 PF02378 Phosphotransferase system, EIIC YPDSF_RS00145 PF01232 Mannitol dehydrogenase Rossmann domain YPDSF_RS00145 PF08125 Mannitol dehydrogenase C-terminal domain YPDSF_RS00150 PF05068 Mannitol repressor YPDSF_RS00155 PF10928 Protein of unknown function (DUF2810) YPDSF_RS00160 PF10517 YPDSF_RS00160 YPDSF_RS00170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPDSF_RS00170 PF00672 HAMP domain YPDSF_RS00170 PF16591 YPDSF_RS00170 YPDSF_RS00175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YPDSF_RS00175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YPDSF_RS00180 PF02634 FdhD/NarQ family YPDSF_RS00185 PF00384 Molybdopterin oxidoreductase YPDSF_RS00185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPDSF_RS00190 PF00384 Molybdopterin oxidoreductase YPDSF_RS00190 PF01568 Molydopterin dinucleotide binding domain YPDSF_RS00195 PF09163 Formate dehydrogenase N, transmembrane YPDSF_RS00195 PF13247 4Fe-4S dicluster domain YPDSF_RS00200 PF01292 Prokaryotic cytochrome b561 YPDSF_RS00205 PF04216 Protein involved in formate dehydrogenase formation YPDSF_RS00210 PF03841 L-seryl-tRNA selenium transferase YPDSF_RS00210 PF12390 YPDSF_RS00210 YPDSF_RS00215 PF00009 Elongation factor Tu GTP binding domain YPDSF_RS00215 PF09106 Elongation factor SelB, winged helix YPDSF_RS00215 PF09107 Elongation factor SelB, winged helix YPDSF_RS00220 PF01526 YPDSF_RS00220 YPDSF_RS00230 PF00872 YPDSF_RS00230 YPDSF_RS00240 PF13988 YPDSF_RS00240 YPDSF_RS00255 PF07690 Major Facilitator Superfamily YPDSF_RS00260 PF00665 Integrase core domain YPDSF_RS00260 PF13276 YPDSF_RS00260 YPDSF_RS00265 PF13518 Helix-turn-helix domain YPDSF_RS00270 PF00455 YPDSF_RS00270 YPDSF_RS00270 PF08220 DeoR-like helix-turn-helix domain YPDSF_RS00275 PF01694 Rhomboid family YPDSF_RS00275 PF12122 Protein of unknown function (DUF3582) YPDSF_RS00280 PF00581 Rhodanese-like domain YPDSF_RS00285 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS00290 PF00343 Carbohydrate phosphorylase YPDSF_RS00295 PF02446 4-alpha-glucanotransferase YPDSF_RS00300 PF01106 NifU-like domain YPDSF_RS00300 PF01521 Iron-sulphur cluster biosynthesis YPDSF_RS00305 PF00156 Phosphoribosyl transferase domain YPDSF_RS00310 PF00561 alpha/beta hydrolase fold YPDSF_RS00315 PF07338 Protein of unknown function (DUF1471) YPDSF_RS00320 PF09012 FeoC like transcriptional regulator YPDSF_RS00325 PF02421 Ferrous iron transport protein B YPDSF_RS00325 PF07664 YPDSF_RS00325 YPDSF_RS00325 PF07670 Nucleoside recognition YPDSF_RS00330 PF04023 FeoA domain YPDSF_RS00340 PF00575 S1 RNA binding domain YPDSF_RS00340 PF09371 Tex-like protein N-terminal domain YPDSF_RS00340 PF12836 Helix-hairpin-helix motif YPDSF_RS00340 PF16921 YPDSF_RS00340 YPDSF_RS00345 PF01272 Transcription elongation factor, GreA/GreB, C-term YPDSF_RS00345 PF03449 Transcription elongation factor, N-terminal YPDSF_RS00350 PF00072 Response regulator receiver domain YPDSF_RS00350 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS00355 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS00355 PF00672 HAMP domain YPDSF_RS00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS00360 PF01293 Phosphoenolpyruvate carboxykinase YPDSF_RS00365 PF01430 Hsp33 protein YPDSF_RS00370 PF01479 S4 domain YPDSF_RS00375 PF13419 Haloacid dehalogenase-like hydrolase YPDSF_RS00380 PF07095 Intracellular growth attenuator protein IgaA YPDSF_RS00390 PF00293 NUDIX domain YPDSF_RS00395 PF00905 Penicillin binding protein transpeptidase domain YPDSF_RS00395 PF00912 Transglycosylase YPDSF_RS00395 PF17092 YPDSF_RS00395 YPDSF_RS00400 PF11104 Type IV pilus assembly protein PilM; YPDSF_RS00405 PF05137 YPDSF_RS00405 YPDSF_RS00415 PF10748 YPDSF_RS00415 YPDSF_RS00425 PF00263 YPDSF_RS00425 YPDSF_RS00425 PF03958 Bacterial type II/III secretion system short domain YPDSF_RS00430 PF01202 Shikimate kinase YPDSF_RS00435 PF01761 3-dehydroquinate synthase YPDSF_RS00440 PF05036 Sporulation related domain YPDSF_RS00445 PF02086 D12 class N6 adenine-specific DNA methyltransferase YPDSF_RS00450 PF00834 Ribulose-phosphate 3 epimerase family YPDSF_RS00455 PF13419 Haloacid dehalogenase-like hydrolase YPDSF_RS00460 PF00579 tRNA synthetases class I (W and Y) YPDSF_RS00465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YPDSF_RS00465 PF10414 Sirohaem synthase dimerisation region YPDSF_RS00465 PF13241 Putative NAD(P)-binding YPDSF_RS00465 PF14824 Sirohaem biosynthesis protein central YPDSF_RS00470 PF01226 Formate/nitrite transporter YPDSF_RS00475 PF13806 Rieske-like [2Fe-2S] domain YPDSF_RS00480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YPDSF_RS00480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YPDSF_RS00480 PF04324 BFD-like [2Fe-2S] binding domain YPDSF_RS00480 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS00485 PF07969 Amidohydrolase family YPDSF_RS00490 PF07690 Major Facilitator Superfamily YPDSF_RS00495 PF00593 TonB dependent receptor YPDSF_RS00495 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS00500 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS00500 PF13377 Periplasmic binding protein-like domain YPDSF_RS00510 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YPDSF_RS00515 PF05872 YPDSF_RS00515 YPDSF_RS00520 PF00117 Glutamine amidotransferase class-I YPDSF_RS00525 PF00202 Aminotransferase class-III YPDSF_RS00530 PF12805 YPDSF_RS00530 YPDSF_RS00530 PF13515 YPDSF_RS00530 YPDSF_RS00535 PF00027 Cyclic nucleotide-binding domain YPDSF_RS00535 PF00325 Bacterial regulatory proteins, crp family YPDSF_RS00540 PF02566 OsmC-like protein YPDSF_RS00545 PF06836 YPDSF_RS00545 YPDSF_RS00550 PF00485 Phosphoribulokinase / Uridine kinase family YPDSF_RS00555 PF06794 Uncharacterised protein family (UPF0270) YPDSF_RS00560 PF00561 alpha/beta hydrolase fold YPDSF_RS00565 PF01810 YPDSF_RS00565 YPDSF_RS00570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YPDSF_RS00575 PF00005 ABC transporter YPDSF_RS00580 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS00585 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YPDSF_RS00595 PF00535 Glycosyl transferase family 2 YPDSF_RS00600 PF00005 ABC transporter YPDSF_RS00600 PF12848 ABC transporter YPDSF_RS00605 PF02525 Flavodoxin-like fold YPDSF_RS00610 PF00999 Sodium/hydrogen exchanger family YPDSF_RS00610 PF02254 TrkA-N domain YPDSF_RS00615 PF09526 YPDSF_RS00615 YPDSF_RS00620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPDSF_RS00625 PF04102 SlyX YPDSF_RS00630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPDSF_RS00630 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YPDSF_RS00635 PF08348 YPDSF_RS00635 YPDSF_RS00635 PF13309 YPDSF_RS00635 YPDSF_RS00640 PF02635 DsrE/DsrF-like family YPDSF_RS00645 PF02635 DsrE/DsrF-like family YPDSF_RS00650 PF04077 DsrH like protein YPDSF_RS00655 PF00164 Ribosomal protein S12/S23 YPDSF_RS00660 PF00177 Ribosomal protein S7p/S5e YPDSF_RS00665 PF00009 Elongation factor Tu GTP binding domain YPDSF_RS00665 PF00679 Elongation factor G C-terminus YPDSF_RS00665 PF03144 Elongation factor Tu domain 2 YPDSF_RS00665 PF03764 Elongation factor G, domain IV YPDSF_RS00665 PF14492 Elongation Factor G, domain II YPDSF_RS00670 PF00009 Elongation factor Tu GTP binding domain YPDSF_RS00670 PF03143 Elongation factor Tu C-terminal domain YPDSF_RS00670 PF03144 Elongation factor Tu domain 2 YPDSF_RS00675 PF01797 Transposase IS200 like YPDSF_RS00680 PF04324 BFD-like [2Fe-2S] binding domain YPDSF_RS00685 PF00210 Ferritin-like domain YPDSF_RS00690 PF00338 Ribosomal protein S10p/S20e YPDSF_RS00695 PF00297 Ribosomal protein L3 YPDSF_RS00700 PF00573 Ribosomal protein L4/L1 family YPDSF_RS00705 PF00276 Ribosomal protein L23 YPDSF_RS00710 PF00181 Ribosomal Proteins L2, RNA binding domain YPDSF_RS00710 PF03947 Ribosomal Proteins L2, C-terminal domain YPDSF_RS00715 PF00203 Ribosomal protein S19 YPDSF_RS00720 PF00237 Ribosomal protein L22p/L17e YPDSF_RS00725 PF00189 Ribosomal protein S3, C-terminal domain YPDSF_RS00725 PF07650 KH domain YPDSF_RS00730 PF00252 Ribosomal protein L16p/L10e YPDSF_RS00735 PF00831 Ribosomal L29 protein YPDSF_RS00740 PF00366 Ribosomal protein S17 YPDSF_RS00745 PF00238 Ribosomal protein L14p/L23e YPDSF_RS00750 PF00467 KOW motif YPDSF_RS00750 PF17136 YPDSF_RS00750 YPDSF_RS00755 PF00281 Ribosomal protein L5 YPDSF_RS00755 PF00673 ribosomal L5P family C-terminus YPDSF_RS00760 PF00253 Ribosomal protein S14p/S29e YPDSF_RS00765 PF00410 Ribosomal protein S8 YPDSF_RS00770 PF00347 Ribosomal protein L6 YPDSF_RS00775 PF00861 Ribosomal L18p/L5e family YPDSF_RS00780 PF00333 Ribosomal protein S5, N-terminal domain YPDSF_RS00780 PF03719 Ribosomal protein S5, C-terminal domain YPDSF_RS00785 PF00327 Ribosomal protein L30p/L7e YPDSF_RS00790 PF00828 Ribosomal protein L18e/L15 YPDSF_RS00795 PF00344 SecY translocase YPDSF_RS00800 PF00444 Ribosomal protein L36 YPDSF_RS00805 PF00416 Ribosomal protein S13/S18 YPDSF_RS00810 PF00411 Ribosomal protein S11 YPDSF_RS00815 PF00163 Ribosomal protein S4/S9 N-terminal domain YPDSF_RS00815 PF01479 S4 domain YPDSF_RS00820 PF01000 RNA polymerase Rpb3/RpoA insert domain YPDSF_RS00820 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain YPDSF_RS00820 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain YPDSF_RS00825 PF01196 Ribosomal protein L17 YPDSF_RS00830 PF13411 MerR HTH family regulatory protein YPDSF_RS00835 PF03889 YPDSF_RS00835 YPDSF_RS00840 PF01741 Large-conductance mechanosensitive channel, MscL YPDSF_RS00845 PF02080 TrkA-C domain YPDSF_RS00845 PF02254 TrkA-N domain YPDSF_RS00850 PF01029 NusB family YPDSF_RS00850 PF01189 NOL1/NOP2/sun family YPDSF_RS00855 PF00551 Formyl transferase YPDSF_RS00855 PF02911 Formyl transferase, C-terminal domain YPDSF_RS00860 PF01327 Polypeptide deformylase YPDSF_RS00865 PF02481 DNA recombination-mediator protein A YPDSF_RS00870 PF04361 YPDSF_RS00870 YPDSF_RS00875 PF01396 YPDSF_RS00875 YPDSF_RS00880 PF01300 Telomere recombination YPDSF_RS00885 PF01488 Shikimate / quinate 5-dehydrogenase YPDSF_RS00885 PF08501 Shikimate dehydrogenase substrate binding domain YPDSF_RS00890 PF00132 Bacterial transferase hexapeptide (six repeats) YPDSF_RS00940 PF04204 Homoserine O-succinyltransferase YPDSF_RS00945 PF01274 Malate synthase YPDSF_RS00950 PF00463 Isocitrate lyase family YPDSF_RS00955 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) YPDSF_RS00960 PF01614 Bacterial transcriptional regulator YPDSF_RS00960 PF09339 IclR helix-turn-helix domain YPDSF_RS00965 PF00809 Pterin binding enzyme YPDSF_RS00965 PF02310 B12 binding domain YPDSF_RS00965 PF02574 Homocysteine S-methyltransferase YPDSF_RS00965 PF02607 B12 binding domain YPDSF_RS00965 PF02965 Vitamin B12 dependent methionine synthase, activation domain YPDSF_RS00975 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPDSF_RS00975 PF08479 POTRA domain, ShlB-type YPDSF_RS00980 PF00696 Amino acid kinase family YPDSF_RS00985 PF00342 Phosphoglucose isomerase YPDSF_RS00990 PF06146 YPDSF_RS00990 YPDSF_RS00995 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS01000 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS01000 PF14785 Maltose transport system permease protein MalF P2 domain YPDSF_RS01005 PF13416 Bacterial extracellular solute-binding protein YPDSF_RS01015 PF00005 ABC transporter YPDSF_RS01015 PF08402 TOBE domain YPDSF_RS01020 PF02264 LamB porin YPDSF_RS01025 PF07148 YPDSF_RS01025 YPDSF_RS01035 PF05638 Protein of unknown function (DUF796) YPDSF_RS01040 PF05591 YPDSF_RS01040 YPDSF_RS01045 PF05943 YPDSF_RS01045 YPDSF_RS01050 PF04965 Gene 25-like lysozyme YPDSF_RS01055 PF05947 YPDSF_RS01055 YPDSF_RS01060 PF00665 Integrase core domain YPDSF_RS01060 PF13276 YPDSF_RS01060 YPDSF_RS01065 PF13518 Helix-turn-helix domain YPDSF_RS01070 PF05947 YPDSF_RS01070 YPDSF_RS01075 PF06996 YPDSF_RS01075 YPDSF_RS01085 PF12790 Type VI secretion lipoprotein YPDSF_RS01090 PF05936 YPDSF_RS01090 YPDSF_RS01095 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) YPDSF_RS01100 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS01100 PF07724 AAA domain (Cdc48 subfamily) YPDSF_RS01100 PF10431 C-terminal, D2-small domain, of ClpB protein YPDSF_RS01105 PF02954 Bacterial regulatory protein, Fis family YPDSF_RS01110 PF11319 YPDSF_RS01110 YPDSF_RS01115 PF06812 YPDSF_RS01115 YPDSF_RS01115 PF16989 YPDSF_RS01115 YPDSF_RS01120 PF06744 YPDSF_RS01120 YPDSF_RS01120 PF06761 YPDSF_RS01120 YPDSF_RS01120 PF14331 YPDSF_RS01120 YPDSF_RS01125 PF06812 YPDSF_RS01125 YPDSF_RS01130 PF12486 YPDSF_RS01130 YPDSF_RS01135 PF05954 Phage late control gene D protein (GPD) YPDSF_RS01140 PF08786 Domain of unknown function (DUF1795) YPDSF_RS01145 PF05488 PAAR motif YPDSF_RS01145 PF05593 YPDSF_RS01145 YPDSF_RS01150 PF03527 YPDSF_RS01150 YPDSF_RS01150 PF14414 YPDSF_RS01150 YPDSF_RS01155 PF09346 SMI1 / KNR4 family (SUKH-1) YPDSF_RS01160 PF08845 YPDSF_RS01160 YPDSF_RS01165 PF08845 YPDSF_RS01165 YPDSF_RS01170 PF01381 Helix-turn-helix YPDSF_RS01180 PF05954 Phage late control gene D protein (GPD) YPDSF_RS01185 PF08786 Domain of unknown function (DUF1795) YPDSF_RS01190 PF03527 YPDSF_RS01190 YPDSF_RS01190 PF05488 PAAR motif YPDSF_RS01190 PF05593 YPDSF_RS01190 YPDSF_RS01200 PF01261 Xylose isomerase-like TIM barrel YPDSF_RS01205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPDSF_RS01210 PF02311 AraC-like ligand binding domain YPDSF_RS01210 PF12833 Helix-turn-helix domain YPDSF_RS01215 PF05025 RbsD / FucU transport protein family YPDSF_RS01220 PF00294 pfkB family carbohydrate kinase YPDSF_RS01225 PF01791 DeoC/LacD family aldolase YPDSF_RS01230 PF03358 NADPH-dependent FMN reductase YPDSF_RS01235 PF09084 NMT1/THI5 like YPDSF_RS01240 PF00296 Luciferase-like monooxygenase YPDSF_RS01245 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS01250 PF00005 ABC transporter YPDSF_RS01255 PF04221 RelB antitoxin YPDSF_RS01260 PF00860 Permease family YPDSF_RS01265 PF00999 Sodium/hydrogen exchanger family YPDSF_RS01275 PF03279 YPDSF_RS01275 YPDSF_RS01280 PF13407 Periplasmic binding protein domain YPDSF_RS01285 PF00005 ABC transporter YPDSF_RS01290 PF02653 YPDSF_RS01290 YPDSF_RS01295 PF02653 YPDSF_RS01295 YPDSF_RS01300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPDSF_RS01300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPDSF_RS01305 PF01380 SIS domain YPDSF_RS01310 PF00043 Glutathione S-transferase, C-terminal domain YPDSF_RS01310 PF02798 Glutathione S-transferase, N-terminal domain YPDSF_RS01315 PF13449 Esterase-like activity of phytase YPDSF_RS01330 PF01797 Transposase IS200 like YPDSF_RS01335 PF00313 'Cold-shock' DNA-binding domain YPDSF_RS01340 PF00313 'Cold-shock' DNA-binding domain YPDSF_RS01350 PF05433 YPDSF_RS01350 YPDSF_RS01355 PF00753 Metallo-beta-lactamase superfamily YPDSF_RS01360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YPDSF_RS01360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YPDSF_RS01365 PF02627 Carboxymuconolactone decarboxylase family YPDSF_RS01370 PF07690 Major Facilitator Superfamily YPDSF_RS01375 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS01375 PF07729 FCD domain YPDSF_RS01385 PF09204 Bacterial self-protective colicin-like immunity YPDSF_RS01390 PF02954 Bacterial regulatory protein, Fis family YPDSF_RS01395 PF01207 Dihydrouridine synthase (Dus) YPDSF_RS01400 PF06325 Ribosomal protein L11 methyltransferase (PrmA) YPDSF_RS01405 PF00474 Sodium:solute symporter family YPDSF_RS01410 PF06196 YPDSF_RS01410 YPDSF_RS01415 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain YPDSF_RS01415 PF02785 Biotin carboxylase C-terminal domain YPDSF_RS01415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YPDSF_RS01420 PF00364 Biotin-requiring enzyme YPDSF_RS01425 PF01220 Dehydroquinase class II YPDSF_RS01430 PF01794 YPDSF_RS01430 YPDSF_RS01435 PF00174 Oxidoreductase molybdopterin binding domain YPDSF_RS01440 PF00107 Zinc-binding dehydrogenase YPDSF_RS01440 PF08240 Alcohol dehydrogenase GroES-like domain YPDSF_RS01445 PF00563 EAL domain YPDSF_RS01445 PF00990 GGDEF domain YPDSF_RS01445 PF17157 YPDSF_RS01445 YPDSF_RS01450 PF06723 MreB/Mbl protein YPDSF_RS01455 PF04085 rod shape-determining protein MreC YPDSF_RS01460 PF04093 YPDSF_RS01460 YPDSF_RS01465 PF02545 Maf-like protein YPDSF_RS01470 PF00575 S1 RNA binding domain YPDSF_RS01470 PF10150 Ribonuclease E/G family YPDSF_RS01475 PF13116 YPDSF_RS01475 YPDSF_RS01475 PF13502 YPDSF_RS01475 YPDSF_RS01480 PF00795 Carbon-nitrogen hydrolase YPDSF_RS01485 PF01523 Putative modulator of DNA gyrase YPDSF_RS01495 PF00782 Dual specificity phosphatase, catalytic domain YPDSF_RS01505 PF10828 YPDSF_RS01505 YPDSF_RS01510 PF13539 D-alanyl-D-alanine carboxypeptidase YPDSF_RS01515 PF16083 YPDSF_RS01515 YPDSF_RS01520 PF03534 Salmonella virulence plasmid 65kDa B protein YPDSF_RS01520 PF12255 Insecticide toxin TcdB middle/C-terminal region YPDSF_RS01520 PF12256 Insecticide toxin TcdB middle/N-terminal region YPDSF_RS01530 PF03538 Salmonella virulence plasmid 28 YPDSF_RS01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS01540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS01540 PF03466 LysR substrate binding domain YPDSF_RS01545 PF07869 YPDSF_RS01545 YPDSF_RS01550 PF13437 HlyD family secretion protein YPDSF_RS01550 PF13533 Biotin-lipoyl like YPDSF_RS01555 PF04632 YPDSF_RS01555 YPDSF_RS01560 PF00171 Aldehyde dehydrogenase family YPDSF_RS01565 PF00171 Aldehyde dehydrogenase family YPDSF_RS01570 PF00545 ribonuclease YPDSF_RS01575 PF01337 Barstar (barnase inhibitor) YPDSF_RS01580 PF04751 Protein of unknown function (DUF615) YPDSF_RS01585 PF01523 Putative modulator of DNA gyrase YPDSF_RS01595 PF07361 Cytochrome b562 YPDSF_RS01600 PF01272 Transcription elongation factor, GreA/GreB, C-term YPDSF_RS01600 PF14760 Rnk N-terminus YPDSF_RS01605 PF00128 Alpha amylase, catalytic domain YPDSF_RS01605 PF11941 Domain of unknown function (DUF3459) YPDSF_RS01610 PF00367 phosphotransferase system, EIIB YPDSF_RS01610 PF02378 Phosphotransferase system, EIIC YPDSF_RS01615 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS01615 PF13377 Periplasmic binding protein-like domain YPDSF_RS01620 PF16743 YPDSF_RS01620 YPDSF_RS01625 PF01042 Endoribonuclease L-PSP YPDSF_RS01630 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain YPDSF_RS01630 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain YPDSF_RS01635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YPDSF_RS01635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YPDSF_RS01640 PF00381 PTS HPr component phosphorylation site YPDSF_RS01645 PF03668 YPDSF_RS01645 YPDSF_RS01650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPDSF_RS01660 PF00309 YPDSF_RS01660 YPDSF_RS01660 PF04552 Sigma-54, DNA binding domain YPDSF_RS01660 PF04963 Sigma-54 factor, core binding domain YPDSF_RS01665 PF00005 ABC transporter YPDSF_RS01665 PF12399 Branched-chain amino acid ATP-binding cassette transporter YPDSF_RS01670 PF03968 OstA-like protein YPDSF_RS01675 PF06835 Lipopolysaccharide-assembly, LptC-related YPDSF_RS01680 PF08282 haloacid dehalogenase-like hydrolase YPDSF_RS01685 PF00571 CBS domain YPDSF_RS01685 PF01380 SIS domain YPDSF_RS01690 PF01699 Sodium/calcium exchanger protein YPDSF_RS01695 PF00005 ABC transporter YPDSF_RS01700 PF02405 YPDSF_RS01700 YPDSF_RS01705 PF02470 YPDSF_RS01705 YPDSF_RS01710 PF05494 Toluene tolerance, Ttg2 YPDSF_RS01715 PF13466 STAS domain YPDSF_RS01720 PF01722 BolA-like protein YPDSF_RS01725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YPDSF_RS01730 PF13180 PDZ domain YPDSF_RS01730 PF13365 Trypsin-like peptidase domain YPDSF_RS01735 PF01797 Transposase IS200 like YPDSF_RS01740 PF00595 PDZ domain (Also known as DHR or GLGF) YPDSF_RS01740 PF13180 PDZ domain YPDSF_RS01740 PF13365 Trypsin-like peptidase domain YPDSF_RS01745 PF06295 YPDSF_RS01745 YPDSF_RS01750 PF03969 AFG1-like ATPase YPDSF_RS01755 PF00572 Ribosomal protein L13 YPDSF_RS01760 PF00380 Ribosomal protein S9/S16 YPDSF_RS01770 PF00043 Glutathione S-transferase, C-terminal domain YPDSF_RS01770 PF02798 Glutathione S-transferase, N-terminal domain YPDSF_RS01775 PF04386 Stringent starvation protein B YPDSF_RS01785 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS01785 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YPDSF_RS01790 PF00310 Glutamine amidotransferases class-II YPDSF_RS01790 PF01493 GXGXG motif YPDSF_RS01790 PF01645 Conserved region in glutamate synthase YPDSF_RS01790 PF04898 Glutamate synthase central domain YPDSF_RS01795 PF04055 Radical SAM superfamily YPDSF_RS01795 PF16199 YPDSF_RS01795 YPDSF_RS01805 PF00072 Response regulator receiver domain YPDSF_RS01805 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS01805 PF00989 PAS fold YPDSF_RS01805 PF01627 Hpt domain YPDSF_RS01805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS01820 PF00912 Transglycosylase YPDSF_RS01825 PF04972 BON domain YPDSF_RS01830 PF13580 SIS domain YPDSF_RS01835 PF02021 Uncharacterised protein family UPF0102 YPDSF_RS01840 PF04348 LppC putative lipoprotein YPDSF_RS01845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YPDSF_RS01850 PF02678 Pirin YPDSF_RS01855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS01855 PF03466 LysR substrate binding domain YPDSF_RS01860 PF13409 Glutathione S-transferase, N-terminal domain YPDSF_RS01860 PF13410 Glutathione S-transferase, C-terminal domain YPDSF_RS01865 PF07681 YPDSF_RS01865 YPDSF_RS01870 PF13997 YPDSF_RS01870 YPDSF_RS01875 PF07332 YPDSF_RS01875 YPDSF_RS01880 PF05957 YPDSF_RS01880 YPDSF_RS01890 PF06476 YPDSF_RS01890 YPDSF_RS01895 PF13721 SecD export protein N-terminal TM region YPDSF_RS01900 PF09335 YPDSF_RS01900 YPDSF_RS01910 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS01910 PF07729 FCD domain YPDSF_RS01925 PF02614 Glucuronate isomerase YPDSF_RS01930 PF01232 Mannitol dehydrogenase Rossmann domain YPDSF_RS01930 PF08125 Mannitol dehydrogenase C-terminal domain YPDSF_RS01935 PF04295 YPDSF_RS01935 YPDSF_RS01935 PF08666 SAF domain YPDSF_RS01940 PF10688 YPDSF_RS01940 YPDSF_RS01945 PF01797 Transposase IS200 like YPDSF_RS01950 PF00375 Sodium:dicarboxylate symporter family YPDSF_RS01955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPDSF_RS01960 PF01863 Protein of unknown function DUF45 YPDSF_RS01965 PF03212 Pertactin YPDSF_RS01965 PF03797 Autotransporter beta-domain YPDSF_RS01970 PF05175 Methyltransferase small domain YPDSF_RS01975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YPDSF_RS01975 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS01980 PF03729 YPDSF_RS01980 YPDSF_RS01990 PF00069 Protein kinase domain YPDSF_RS01995 PF13672 Protein phosphatase 2C YPDSF_RS02005 PF00092 von Willebrand factor type A domain YPDSF_RS02010 PF02342 TerD domain YPDSF_RS02015 PF00092 von Willebrand factor type A domain YPDSF_RS02020 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPDSF_RS02020 PF08479 POTRA domain, ShlB-type YPDSF_RS02025 PF04829 YPDSF_RS02025 YPDSF_RS02025 PF05860 haemagglutination activity domain YPDSF_RS02025 PF13018 YPDSF_RS02025 YPDSF_RS02025 PF13332 YPDSF_RS02025 YPDSF_RS02035 PF13332 YPDSF_RS02035 YPDSF_RS02045 PF15599 YPDSF_RS02045 YPDSF_RS02060 PF03797 Autotransporter beta-domain YPDSF_RS02065 PF13557 YPDSF_RS02065 YPDSF_RS02070 PF10091 Putative glucoamylase YPDSF_RS02075 PF00005 ABC transporter YPDSF_RS02075 PF08402 TOBE domain YPDSF_RS02085 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS02085 PF13377 Periplasmic binding protein-like domain YPDSF_RS02090 PF01547 Bacterial extracellular solute-binding protein YPDSF_RS02095 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS02100 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS02110 PF00933 Glycosyl hydrolase family 3 N terminal domain YPDSF_RS02110 PF01915 Glycosyl hydrolase family 3 C-terminal domain YPDSF_RS02110 PF14310 Fibronectin type III-like domain YPDSF_RS02115 PF02321 Outer membrane efflux protein YPDSF_RS02120 PF04632 YPDSF_RS02120 YPDSF_RS02125 PF13437 HlyD family secretion protein YPDSF_RS02125 PF13533 Biotin-lipoyl like YPDSF_RS02130 PF17090 YPDSF_RS02130 YPDSF_RS02145 PF00155 Aminotransferase class I and II YPDSF_RS02155 PF10604 Polyketide cyclase / dehydrase and lipid transport YPDSF_RS02160 PF08348 YPDSF_RS02160 YPDSF_RS02160 PF13309 YPDSF_RS02160 YPDSF_RS02165 PF01042 Endoribonuclease L-PSP YPDSF_RS02170 PF01042 Endoribonuclease L-PSP YPDSF_RS02175 PF08803 Putative mono-oxygenase ydhR YPDSF_RS02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS02185 PF03466 LysR substrate binding domain YPDSF_RS02190 PF01695 IstB-like ATP binding protein YPDSF_RS02195 PF00665 Integrase core domain YPDSF_RS02195 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS02205 PF02661 Fic/DOC family YPDSF_RS02240 PF03592 Terminase small subunit YPDSF_RS02255 PF00140 Sigma-70 factor, region 1 YPDSF_RS02255 PF03979 Sigma-70 factor, region 1 YPDSF_RS02255 PF04539 Sigma-70 region 3 YPDSF_RS02255 PF04542 Sigma-70 region 2 YPDSF_RS02255 PF04545 Sigma-70, region 4 YPDSF_RS02255 PF04546 Sigma-70, non-essential region YPDSF_RS02260 PF01807 CHC2 zinc finger YPDSF_RS02260 PF08275 DNA primase catalytic core, N-terminal domain YPDSF_RS02260 PF08278 DNA primase DnaG DnaB-binding YPDSF_RS02260 PF10410 DnaB-helicase binding domain of primase YPDSF_RS02260 PF13155 Toprim-like YPDSF_RS02265 PF01165 Ribosomal protein S21 YPDSF_RS02270 PF00814 Glycoprotease family YPDSF_RS02275 PF02660 YPDSF_RS02275 YPDSF_RS02280 PF02152 Dihydroneopterin aldolase YPDSF_RS02285 PF02673 YPDSF_RS02285 YPDSF_RS02290 PF01743 Poly A polymerase head domain YPDSF_RS02290 PF01966 HD domain YPDSF_RS02290 PF12627 Probable RNA and SrmB- binding site of polymerase A YPDSF_RS02295 PF08239 Bacterial SH3 domain YPDSF_RS02300 PF01928 CYTH domain YPDSF_RS02305 PF03710 Glutamate-ammonia ligase adenylyltransferase YPDSF_RS02305 PF08335 GlnD PII-uridylyltransferase YPDSF_RS02310 PF00294 pfkB family carbohydrate kinase YPDSF_RS02310 PF01467 Cytidylyltransferase YPDSF_RS02315 PF13520 Amino acid permease YPDSF_RS02320 PF04380 YPDSF_RS02320 YPDSF_RS02330 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YPDSF_RS02335 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YPDSF_RS02340 PF03738 Glutathionylspermidine synthase preATP-grasp YPDSF_RS02345 PF06693 YPDSF_RS02345 YPDSF_RS02355 PF02321 Outer membrane efflux protein YPDSF_RS02360 PF00293 NUDIX domain YPDSF_RS02365 PF06853 YPDSF_RS02365 YPDSF_RS02370 PF00149 Calcineurin-like phosphoesterase YPDSF_RS02375 PF05728 Uncharacterised protein family (UPF0227) YPDSF_RS02380 PF00204 DNA gyrase B YPDSF_RS02380 PF00986 DNA gyrase B subunit, carboxyl terminus YPDSF_RS02380 PF01751 Toprim domain YPDSF_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS02385 PF03466 LysR substrate binding domain YPDSF_RS02390 PF02525 Flavodoxin-like fold YPDSF_RS02395 PF00521 DNA gyrase/topoisomerase IV, subunit A YPDSF_RS02395 PF03989 DNA gyrase C-terminal domain, beta-propeller YPDSF_RS02400 PF01553 Acyltransferase YPDSF_RS02405 PF07731 Multicopper oxidase YPDSF_RS02405 PF07732 Multicopper oxidase YPDSF_RS02415 PF00248 Aldo/keto reductase family YPDSF_RS02425 PF00465 Iron-containing alcohol dehydrogenase YPDSF_RS02430 PF06719 YPDSF_RS02430 YPDSF_RS02430 PF12833 Helix-turn-helix domain YPDSF_RS02435 PF09335 YPDSF_RS02435 YPDSF_RS02440 PF01053 Cys/Met metabolism PLP-dependent enzyme YPDSF_RS02445 PF01618 YPDSF_RS02445 YPDSF_RS02450 PF02472 Biopolymer transport protein ExbD/TolR YPDSF_RS02460 PF16964 YPDSF_RS02460 YPDSF_RS02465 PF07811 YPDSF_RS02465 YPDSF_RS02475 PF00482 Type II secretion system (T2SS), protein F YPDSF_RS02480 PF00482 Type II secretion system (T2SS), protein F YPDSF_RS02485 PF00437 Type II/IV secretion system protein YPDSF_RS02500 PF00263 YPDSF_RS02500 YPDSF_RS02505 PF13629 YPDSF_RS02505 YPDSF_RS02515 PF01478 Type IV leader peptidase family YPDSF_RS02520 PF01797 Transposase IS200 like YPDSF_RS02525 PF00577 Outer membrane usher protein YPDSF_RS02525 PF13953 PapC C-terminal domain YPDSF_RS02525 PF13954 PapC N-terminal domain YPDSF_RS02530 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS02530 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS02540 PF01497 Periplasmic binding protein YPDSF_RS02550 PF11153 YPDSF_RS02550 YPDSF_RS02555 PF00771 FHIPEP family YPDSF_RS02560 PF01312 FlhB HrpN YscU SpaS Family YPDSF_RS02565 PF01311 YPDSF_RS02565 YPDSF_RS02570 PF01313 YPDSF_RS02570 YPDSF_RS02575 PF00813 YPDSF_RS02575 YPDSF_RS02580 PF01052 Surface presentation of antigens (SPOA) YPDSF_RS02585 PF01052 Surface presentation of antigens (SPOA) YPDSF_RS02590 PF00158 Sigma-54 interaction domain YPDSF_RS02590 PF02954 Bacterial regulatory protein, Fis family YPDSF_RS02595 PF02049 YPDSF_RS02595 YPDSF_RS02600 PF01514 Secretory protein of YscJ/FliF family YPDSF_RS02600 PF08345 YPDSF_RS02600 YPDSF_RS02605 PF01706 FliG C-terminal domain YPDSF_RS02605 PF14841 FliG middle domain YPDSF_RS02605 PF14842 FliG N-terminal domain YPDSF_RS02610 PF02108 YPDSF_RS02610 YPDSF_RS02610 PF09811 YPDSF_RS02610 YPDSF_RS02615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPDSF_RS02620 PF02050 Flagellar FliJ protein YPDSF_RS02625 PF05130 FlgN protein YPDSF_RS02630 PF04316 Anti-sigma-28 factor, FlgM YPDSF_RS02635 PF13144 SAF-like YPDSF_RS02640 PF00460 Flagella basal body rod protein YPDSF_RS02645 PF00460 Flagella basal body rod protein YPDSF_RS02645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPDSF_RS02650 PF03963 YPDSF_RS02650 YPDSF_RS02650 PF13860 FlgD Ig-like domain YPDSF_RS02650 PF13861 FlgD Tudor-like domain YPDSF_RS02655 PF00460 Flagella basal body rod protein YPDSF_RS02655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPDSF_RS02655 PF07559 Flagellar basal body protein FlaE YPDSF_RS02660 PF00460 Flagella basal body rod protein YPDSF_RS02660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPDSF_RS02665 PF00460 Flagella basal body rod protein YPDSF_RS02665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPDSF_RS02670 PF02107 YPDSF_RS02670 YPDSF_RS02675 PF02119 YPDSF_RS02675 YPDSF_RS02680 PF10135 YPDSF_RS02680 YPDSF_RS02685 PF00460 Flagella basal body rod protein YPDSF_RS02685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPDSF_RS02690 PF00669 Bacterial flagellin N-terminal helical region YPDSF_RS02705 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS02710 PF00669 Bacterial flagellin N-terminal helical region YPDSF_RS02710 PF00700 Bacterial flagellin C-terminal helical region YPDSF_RS02715 PF00669 Bacterial flagellin N-terminal helical region YPDSF_RS02715 PF00700 Bacterial flagellin C-terminal helical region YPDSF_RS02720 PF13518 Helix-turn-helix domain YPDSF_RS02725 PF00665 Integrase core domain YPDSF_RS02725 PF13276 YPDSF_RS02725 YPDSF_RS02730 PF13347 MFS/sugar transport protein YPDSF_RS02735 PF00593 TonB dependent receptor YPDSF_RS02735 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS02740 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YPDSF_RS02745 PF04183 IucA / IucC family YPDSF_RS02745 PF06276 Ferric iron reductase FhuF-like transporter YPDSF_RS02750 PF13523 Acetyltransferase (GNAT) domain YPDSF_RS02755 PF04183 IucA / IucC family YPDSF_RS02755 PF06276 Ferric iron reductase FhuF-like transporter YPDSF_RS02760 PF04183 IucA / IucC family YPDSF_RS02765 PF07690 Major Facilitator Superfamily YPDSF_RS02770 PF00775 Dioxygenase YPDSF_RS02775 PF10503 Esterase PHB depolymerase YPDSF_RS02780 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS02780 PF03472 Autoinducer binding domain YPDSF_RS02785 PF00765 Autoinducer synthetase YPDSF_RS02790 PF02517 CAAX protease self-immunity YPDSF_RS02800 PF03811 YPDSF_RS02800 YPDSF_RS02800 PF12759 YPDSF_RS02800 YPDSF_RS02815 PF05591 YPDSF_RS02815 YPDSF_RS02820 PF05943 YPDSF_RS02820 YPDSF_RS02825 PF05936 YPDSF_RS02825 YPDSF_RS02830 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) YPDSF_RS02835 PF00691 OmpA family YPDSF_RS02840 PF05638 Protein of unknown function (DUF796) YPDSF_RS02845 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS02845 PF07724 AAA domain (Cdc48 subfamily) YPDSF_RS02845 PF10431 C-terminal, D2-small domain, of ClpB protein YPDSF_RS02850 PF05954 Phage late control gene D protein (GPD) YPDSF_RS02850 PF10106 YPDSF_RS02850 YPDSF_RS02850 PF13296 YPDSF_RS02850 YPDSF_RS02855 PF01551 Peptidase family M23 YPDSF_RS02865 PF12759 YPDSF_RS02865 YPDSF_RS02870 PF03400 YPDSF_RS02870 YPDSF_RS02875 PF10106 YPDSF_RS02875 YPDSF_RS02890 PF01276 Orn/Lys/Arg decarboxylase, major domain YPDSF_RS02890 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YPDSF_RS02890 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YPDSF_RS02895 PF13407 Periplasmic binding protein domain YPDSF_RS02900 PF00005 ABC transporter YPDSF_RS02905 PF02653 YPDSF_RS02905 YPDSF_RS02910 PF00593 TonB dependent receptor YPDSF_RS02910 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS02915 PF01497 Periplasmic binding protein YPDSF_RS02920 PF01464 Transglycosylase SLT domain YPDSF_RS02920 PF11873 Domain of unknown function (DUF3393) YPDSF_RS02925 PF04362 Bacterial Fe(2+) trafficking YPDSF_RS02930 PF00633 Helix-hairpin-helix motif YPDSF_RS02930 PF00730 HhH-GPD superfamily base excision DNA repair protein YPDSF_RS02930 PF10576 Iron-sulfur binding domain of endonuclease III YPDSF_RS02930 PF14815 NUDIX domain YPDSF_RS02935 PF02390 Putative methyltransferase YPDSF_RS02940 PF04320 YPDSF_RS02940 YPDSF_RS02945 PF04960 Glutaminase YPDSF_RS02950 PF11101 YPDSF_RS02950 YPDSF_RS02955 PF11101 YPDSF_RS02955 YPDSF_RS02960 PF11713 Peptidase C80 family YPDSF_RS02965 PF04055 Radical SAM superfamily YPDSF_RS02965 PF06969 HemN C-terminal domain YPDSF_RS02970 PF01725 Ham1 family YPDSF_RS02975 PF02594 Uncharacterised ACR, YggU family COG1872 YPDSF_RS02980 PF02325 YPDSF_RS02980 YPDSF_RS02985 PF03807 NADP oxidoreductase coenzyme F420-dependent YPDSF_RS02985 PF14748 Pyrroline-5-carboxylate reductase dimerisation YPDSF_RS02990 PF01168 Alanine racemase, N-terminal domain YPDSF_RS02995 PF00437 Type II/IV secretion system protein YPDSF_RS03000 PF04371 Porphyromonas-type peptidyl-arginine deiminase YPDSF_RS03005 PF00795 Carbon-nitrogen hydrolase YPDSF_RS03010 PF03652 Uncharacterised protein family (UPF0081) YPDSF_RS03015 PF02622 Uncharacterized ACR, COG1678 YPDSF_RS03020 PF02951 Prokaryotic glutathione synthetase, N-terminal domain YPDSF_RS03020 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain YPDSF_RS03025 PF04452 RNA methyltransferase YPDSF_RS03030 PF04231 Endonuclease I YPDSF_RS03035 PF10263 YPDSF_RS03035 YPDSF_RS03040 PF00438 S-adenosylmethionine synthetase, N-terminal domain YPDSF_RS03040 PF02772 S-adenosylmethionine synthetase, central domain YPDSF_RS03040 PF02773 S-adenosylmethionine synthetase, C-terminal domain YPDSF_RS03045 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YPDSF_RS03045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YPDSF_RS03050 PF00355 Rieske [2Fe-2S] domain YPDSF_RS03055 PF01435 Peptidase family M48 YPDSF_RS03060 PF00456 Transketolase, thiamine diphosphate binding domain YPDSF_RS03060 PF02779 Transketolase, pyrimidine binding domain YPDSF_RS03060 PF02780 Transketolase, C-terminal domain YPDSF_RS03065 PF01797 Transposase IS200 like YPDSF_RS03070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPDSF_RS03070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YPDSF_RS03075 PF00162 Phosphoglycerate kinase YPDSF_RS03080 PF01116 Fructose-bisphosphate aldolase class-II YPDSF_RS03090 PF00924 Mechanosensitive ion channel YPDSF_RS03090 PF05552 Conserved TM helix YPDSF_RS03095 PF01810 YPDSF_RS03095 YPDSF_RS03100 PF04402 Protein of unknown function (DUF541) YPDSF_RS03105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS03105 PF03466 LysR substrate binding domain YPDSF_RS03110 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) YPDSF_RS03115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPDSF_RS03115 PF01842 ACT domain YPDSF_RS03115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPDSF_RS03125 PF01797 Transposase IS200 like YPDSF_RS03130 PF01812 5-formyltetrahydrofolate cyclo-ligase family YPDSF_RS03135 PF05164 Cell division protein ZapA YPDSF_RS03140 PF03695 Uncharacterised protein family (UPF0149) YPDSF_RS03145 PF00557 Metallopeptidase family M24 YPDSF_RS03145 PF05195 Aminopeptidase P, N-terminal domain YPDSF_RS03150 PF01494 FAD binding domain YPDSF_RS03155 PF01494 FAD binding domain YPDSF_RS03160 PF01571 Aminomethyltransferase folate-binding domain YPDSF_RS03160 PF08669 Glycine cleavage T-protein C-terminal barrel domain YPDSF_RS03165 PF01597 Glycine cleavage H-protein YPDSF_RS03170 PF02347 Glycine cleavage system P-protein YPDSF_RS03175 PF13924 YPDSF_RS03175 YPDSF_RS03185 PF03895 YadA-like C-terminal region YPDSF_RS03185 PF05658 Head domain of trimeric autotransporter adhesin YPDSF_RS03185 PF05662 Coiled stalk of trimeric autotransporter adhesin YPDSF_RS03195 PF03006 YPDSF_RS03195 YPDSF_RS03200 PF09933 YPDSF_RS03200 YPDSF_RS03205 PF01571 Aminomethyltransferase folate-binding domain YPDSF_RS03210 PF03937 Flavinator of succinate dehydrogenase YPDSF_RS03215 PF07254 YPDSF_RS03215 YPDSF_RS03220 PF00072 Response regulator receiver domain YPDSF_RS03220 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS03225 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS03225 PF00672 HAMP domain YPDSF_RS03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS03225 PF14827 Sensory domain of two-component sensor kinase YPDSF_RS03230 PF06123 YPDSF_RS03230 YPDSF_RS03235 PF00258 Flavodoxin YPDSF_RS03240 PF00589 Phage integrase family YPDSF_RS03240 PF02899 Phage integrase, N-terminal SAM-like domain YPDSF_RS03245 PF10411 Disulfide bond isomerase protein N-terminus YPDSF_RS03245 PF13098 Thioredoxin-like domain YPDSF_RS03250 PF01368 DHH family YPDSF_RS03250 PF02272 DHHA1 domain YPDSF_RS03255 PF00472 RF-1 domain YPDSF_RS03255 PF03462 PCRF domain YPDSF_RS03260 PF00152 tRNA synthetases class II (D, K and N) YPDSF_RS03260 PF01336 OB-fold nucleic acid binding domain YPDSF_RS03270 PF00589 Phage integrase family YPDSF_RS03270 PF13356 Domain of unknown function (DUF4102) YPDSF_RS03285 PF05016 Plasmid stabilisation system protein YPDSF_RS03290 PF01381 Helix-turn-helix YPDSF_RS03295 PF15723 YPDSF_RS03295 YPDSF_RS03300 PF15731 YPDSF_RS03300 YPDSF_RS03305 PF03288 Poxvirus D5 protein-like YPDSF_RS03305 PF08273 Zinc-binding domain of primase-helicase YPDSF_RS03305 PF08706 YPDSF_RS03305 YPDSF_RS03305 PF13362 Toprim domain YPDSF_RS03310 PF05973 YPDSF_RS03310 YPDSF_RS03320 PF05930 Prophage CP4-57 regulatory protein (AlpA) YPDSF_RS03340 PF02661 Fic/DOC family YPDSF_RS03345 PF05488 PAAR motif YPDSF_RS03345 PF06958 S-type Pyocin YPDSF_RS03350 PF14206 YPDSF_RS03350 YPDSF_RS03360 PF09204 Bacterial self-protective colicin-like immunity YPDSF_RS03370 PF11340 YPDSF_RS03370 YPDSF_RS03385 PF05488 PAAR motif YPDSF_RS03390 PF12977 Domain of Unknown Function with PDB structure (DUF3861) YPDSF_RS03395 PF03551 Transcriptional regulator PadR-like family YPDSF_RS03400 PF05708 Orthopoxvirus protein of unknown function (DUF830) YPDSF_RS03410 PF13407 Periplasmic binding protein domain YPDSF_RS03415 PF02653 YPDSF_RS03415 YPDSF_RS03420 PF00005 ABC transporter YPDSF_RS03425 PF00005 ABC transporter YPDSF_RS03425 PF08402 TOBE domain YPDSF_RS03430 PF13416 Bacterial extracellular solute-binding protein YPDSF_RS03440 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS03445 PF07745 Glycosyl hydrolase family 53 YPDSF_RS03455 PF00367 phosphotransferase system, EIIB YPDSF_RS03460 PF02264 LamB porin YPDSF_RS03465 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS03465 PF13377 Periplasmic binding protein-like domain YPDSF_RS03470 PF01055 Glycosyl hydrolases family 31 YPDSF_RS03470 PF13802 Galactose mutarotase-like YPDSF_RS03470 PF17137 YPDSF_RS03470 YPDSF_RS03475 PF07690 Major Facilitator Superfamily YPDSF_RS03480 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS03480 PF13377 Periplasmic binding protein-like domain YPDSF_RS03490 PF01965 DJ-1/PfpI family YPDSF_RS03495 PF01116 Fructose-bisphosphate aldolase class-II YPDSF_RS03500 PF10022 YPDSF_RS03500 YPDSF_RS03505 PF00884 Sulfatase YPDSF_RS03510 PF04055 Radical SAM superfamily YPDSF_RS03510 PF13186 Iron-sulfur cluster-binding domain YPDSF_RS03515 PF07470 Glycosyl Hydrolase Family 88 YPDSF_RS03520 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS03525 PF01979 Amidohydrolase family YPDSF_RS03530 PF03610 PTS system fructose IIA component YPDSF_RS03535 PF03613 YPDSF_RS03535 YPDSF_RS03540 PF03609 YPDSF_RS03540 YPDSF_RS03545 PF03830 PTS system sorbose subfamily IIB component YPDSF_RS03550 PF01380 SIS domain YPDSF_RS03555 PF08013 Tagatose 6 phosphate kinase YPDSF_RS03560 PF00455 YPDSF_RS03560 YPDSF_RS03560 PF08220 DeoR-like helix-turn-helix domain YPDSF_RS03565 PF00884 Sulfatase YPDSF_RS03570 PF01797 Transposase IS200 like YPDSF_RS03575 PF00665 Integrase core domain YPDSF_RS03575 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS03580 PF01695 IstB-like ATP binding protein YPDSF_RS03585 PF02278 Polysaccharide lyase family 8, super-sandwich domain YPDSF_RS03585 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain YPDSF_RS03585 PF09092 Lyase, N terminal YPDSF_RS03585 PF09093 Lyase, catalytic YPDSF_RS03595 PF16946 YPDSF_RS03595 YPDSF_RS03610 PF00484 Carbonic anhydrase YPDSF_RS03620 PF11356 Type IV pilus biogenesis YPDSF_RS03625 PF00263 YPDSF_RS03625 YPDSF_RS03625 PF03958 Bacterial type II/III secretion system short domain YPDSF_RS03630 PF00437 Type II/IV secretion system protein YPDSF_RS03640 PF00482 Type II secretion system (T2SS), protein F YPDSF_RS03645 PF08334 Type II secretion system (T2SS), protein G YPDSF_RS03645 PF13544 YPDSF_RS03645 YPDSF_RS03655 PF02501 Type II secretion system (T2SS), protein I YPDSF_RS03660 PF11612 Type II secretion system (T2SS), protein J YPDSF_RS03660 PF13633 Prokaryotic N-terminal methylation site YPDSF_RS03665 PF03934 Type II secretion system (T2SS), protein K YPDSF_RS03670 PF05134 Type II secretion system (T2SS), protein L YPDSF_RS03670 PF12693 GspL periplasmic domain YPDSF_RS03680 PF01478 Type IV leader peptidase family YPDSF_RS03680 PF06750 YPDSF_RS03680 YPDSF_RS03685 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) YPDSF_RS03695 PF00872 YPDSF_RS03695 YPDSF_RS03700 PF13419 Haloacid dehalogenase-like hydrolase YPDSF_RS03705 PF14002 YPDSF_RS03705 YPDSF_RS03710 PF03881 Fructosamine kinase YPDSF_RS03720 PF00950 YPDSF_RS03720 YPDSF_RS03725 PF00950 YPDSF_RS03725 YPDSF_RS03730 PF00005 ABC transporter YPDSF_RS03735 PF01297 Periplasmic solute binding protein family YPDSF_RS03740 PF01464 Transglycosylase SLT domain YPDSF_RS03745 PF01914 YPDSF_RS03745 YPDSF_RS03760 PF13619 YPDSF_RS03760 YPDSF_RS03765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YPDSF_RS03765 PF02824 TGS domain YPDSF_RS03765 PF03129 Anticodon binding domain YPDSF_RS03765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YPDSF_RS03770 PF00707 Translation initiation factor IF-3, C-terminal domain YPDSF_RS03775 PF01632 Ribosomal protein L35 YPDSF_RS03780 PF00453 Ribosomal protein L20 YPDSF_RS03785 PF01409 tRNA synthetases class II core domain (F) YPDSF_RS03785 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YPDSF_RS03790 PF01588 Putative tRNA binding domain YPDSF_RS03790 PF03147 Ferredoxin-fold anticodon binding domain YPDSF_RS03790 PF03483 B3/4 domain YPDSF_RS03790 PF03484 tRNA synthetase B5 domain YPDSF_RS03795 PF00216 Bacterial DNA-binding protein YPDSF_RS03800 PF10697 YPDSF_RS03800 YPDSF_RS03805 PF01032 FecCD transport family YPDSF_RS03810 PF00255 Glutathione peroxidase YPDSF_RS03815 PF00005 ABC transporter YPDSF_RS03820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YPDSF_RS03825 PF00535 Glycosyl transferase family 2 YPDSF_RS03830 PF00551 Formyl transferase YPDSF_RS03830 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS03830 PF02911 Formyl transferase, C-terminal domain YPDSF_RS03835 PF01522 Polysaccharide deacetylase YPDSF_RS03840 PF02366 YPDSF_RS03840 YPDSF_RS03845 PF00892 EamA-like transporter family YPDSF_RS03855 PF00877 NlpC/P60 family YPDSF_RS03860 PF03099 Biotin/lipoate A/B protein ligase family YPDSF_RS03860 PF10437 Bacterial lipoate protein ligase C-terminus YPDSF_RS03865 PF02696 YPDSF_RS03865 YPDSF_RS03870 PF00793 DAHP synthetase I family YPDSF_RS03875 PF03618 YPDSF_RS03875 YPDSF_RS03880 PF00391 PEP-utilising enzyme, mobile domain YPDSF_RS03880 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YPDSF_RS03880 PF02896 PEP-utilising enzyme, TIM barrel domain YPDSF_RS03885 PF01594 YPDSF_RS03885 YPDSF_RS03890 PF01565 FAD binding domain YPDSF_RS03890 PF02913 FAD linked oxidases, C-terminal domain YPDSF_RS03890 PF13183 4Fe-4S dicluster domain YPDSF_RS03895 PF03061 Thioesterase superfamily YPDSF_RS03905 PF01521 Iron-sulphur cluster biosynthesis YPDSF_RS03910 PF01458 Uncharacterized protein family (UPF0051) YPDSF_RS03915 PF00005 ABC transporter YPDSF_RS03920 PF01458 Uncharacterized protein family (UPF0051) YPDSF_RS03925 PF00266 Aminotransferase class-V YPDSF_RS03930 PF02657 Fe-S metabolism associated domain YPDSF_RS03935 PF03734 L,D-transpeptidase catalytic domain YPDSF_RS03940 PF01695 IstB-like ATP binding protein YPDSF_RS03945 PF00665 Integrase core domain YPDSF_RS03945 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS03950 PF01797 Transposase IS200 like YPDSF_RS03960 PF04728 Lipoprotein leucine-zipper YPDSF_RS03965 PF00224 Pyruvate kinase, barrel domain YPDSF_RS03965 PF02887 Pyruvate kinase, alpha/beta domain YPDSF_RS03980 PF01554 MatE YPDSF_RS03985 PF00677 Lumazine binding domain YPDSF_RS03990 PF02353 Mycolic acid cyclopropane synthetase YPDSF_RS03995 PF07690 Major Facilitator Superfamily YPDSF_RS04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS04000 PF03466 LysR substrate binding domain YPDSF_RS04005 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS04005 PF13377 Periplasmic binding protein-like domain YPDSF_RS04010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YPDSF_RS04010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YPDSF_RS04015 PF00877 NlpC/P60 family YPDSF_RS04025 PF00462 Glutaredoxin YPDSF_RS04030 PF00929 Exonuclease YPDSF_RS04035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YPDSF_RS04045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YPDSF_RS04050 PF00440 Bacterial regulatory proteins, tetR family YPDSF_RS04050 PF16925 YPDSF_RS04050 YPDSF_RS04055 PF00884 Sulfatase YPDSF_RS04055 PF08019 YPDSF_RS04055 YPDSF_RS04060 PF06945 YPDSF_RS04060 YPDSF_RS04065 PF00248 Aldo/keto reductase family YPDSF_RS04070 PF01047 MarR family YPDSF_RS04075 PF05433 YPDSF_RS04075 YPDSF_RS04080 PF03702 Uncharacterised protein family (UPF0075) YPDSF_RS04085 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme YPDSF_RS04090 PF01243 Pyridoxamine 5'-phosphate oxidase YPDSF_RS04090 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YPDSF_RS04095 PF00579 tRNA synthetases class I (W and Y) YPDSF_RS04095 PF01479 S4 domain YPDSF_RS04100 PF08543 Phosphomethylpyrimidine kinase YPDSF_RS04105 PF00043 Glutathione S-transferase, C-terminal domain YPDSF_RS04105 PF02798 Glutathione S-transferase, N-terminal domain YPDSF_RS04110 PF11656 YPDSF_RS04110 YPDSF_RS04115 PF06930 YPDSF_RS04115 YPDSF_RS04120 PF00854 POT family YPDSF_RS04130 PF00005 ABC transporter YPDSF_RS04135 PF00005 ABC transporter YPDSF_RS04135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPDSF_RS04140 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS04140 PF12911 YPDSF_RS04140 YPDSF_RS04145 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS04150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPDSF_RS04165 PF01797 Transposase IS200 like YPDSF_RS04170 PF00158 Sigma-54 interaction domain YPDSF_RS04170 PF02954 Bacterial regulatory protein, Fis family YPDSF_RS04175 PF04012 YPDSF_RS04175 YPDSF_RS04180 PF06667 YPDSF_RS04180 YPDSF_RS04185 PF04024 YPDSF_RS04185 YPDSF_RS04190 PF09584 YPDSF_RS04190 YPDSF_RS04195 PF04317 YPDSF_RS04195 YPDSF_RS04200 PF05128 YPDSF_RS04200 YPDSF_RS04205 PF08808 YPDSF_RS04205 YPDSF_RS04210 PF09722 YPDSF_RS04210 YPDSF_RS04215 PF00158 Sigma-54 interaction domain YPDSF_RS04215 PF00989 PAS fold YPDSF_RS04220 PF01797 Transposase IS200 like YPDSF_RS04225 PF01695 IstB-like ATP binding protein YPDSF_RS04230 PF00665 Integrase core domain YPDSF_RS04230 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS04235 PF08534 Redoxin YPDSF_RS04240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YPDSF_RS04240 PF13378 Enolase C-terminal domain-like YPDSF_RS04245 PF00246 Zinc carboxypeptidase YPDSF_RS04250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPDSF_RS04255 PF01544 CorA-like Mg2+ transporter protein YPDSF_RS04260 PF13411 MerR HTH family regulatory protein YPDSF_RS04265 PF07859 alpha/beta hydrolase fold YPDSF_RS04270 PF01171 PP-loop family YPDSF_RS04275 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase YPDSF_RS04275 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg YPDSF_RS04275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPDSF_RS04275 PF10371 Domain of unknown function YPDSF_RS04275 PF12838 4Fe-4S dicluster domain YPDSF_RS04275 PF17147 YPDSF_RS04275 YPDSF_RS04280 PF00893 Small Multidrug Resistance protein YPDSF_RS04285 PF02308 YPDSF_RS04285 YPDSF_RS04290 PF03891 YPDSF_RS04290 YPDSF_RS04295 PF03724 META domain YPDSF_RS04300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPDSF_RS04300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPDSF_RS04305 PF11739 YPDSF_RS04305 YPDSF_RS04310 PF13617 YPDSF_RS04310 YPDSF_RS04315 PF07027 YPDSF_RS04315 YPDSF_RS04320 PF01232 Mannitol dehydrogenase Rossmann domain YPDSF_RS04320 PF08125 Mannitol dehydrogenase C-terminal domain YPDSF_RS04325 PF04198 Putative sugar-binding domain YPDSF_RS04325 PF13384 Homeodomain-like domain YPDSF_RS04330 PF02525 Flavodoxin-like fold YPDSF_RS04335 PF00270 DEAD/DEAH box helicase YPDSF_RS04335 PF00271 Helicase conserved C-terminal domain YPDSF_RS04335 PF04408 Helicase associated domain (HA2) YPDSF_RS04335 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YPDSF_RS04335 PF11898 YPDSF_RS04335 YPDSF_RS04340 PF05973 YPDSF_RS04340 YPDSF_RS04345 PF01381 Helix-turn-helix YPDSF_RS04350 PF00089 Trypsin YPDSF_RS04365 PF01292 Prokaryotic cytochrome b561 YPDSF_RS04370 PF04264 YceI-like domain YPDSF_RS04385 PF03497 Anthrax toxin LF subunit YPDSF_RS04395 PF01797 Transposase IS200 like YPDSF_RS04400 PF02074 Carboxypeptidase Taq (M32) metallopeptidase YPDSF_RS04405 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS04405 PF00672 HAMP domain YPDSF_RS04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS04410 PF00072 Response regulator receiver domain YPDSF_RS04410 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS04420 PF13520 Amino acid permease YPDSF_RS04425 PF07338 Protein of unknown function (DUF1471) YPDSF_RS04435 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YPDSF_RS04435 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YPDSF_RS04435 PF12769 Domain of unknown function (DUF3814) YPDSF_RS04440 PF02233 NAD(P) transhydrogenase beta subunit YPDSF_RS04445 PF00582 Universal stress protein family YPDSF_RS04450 PF00027 Cyclic nucleotide-binding domain YPDSF_RS04450 PF13545 Crp-like helix-turn-helix domain YPDSF_RS04455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YPDSF_RS04455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YPDSF_RS04460 PF00245 Alkaline phosphatase YPDSF_RS04465 PF13208 YPDSF_RS04465 YPDSF_RS04470 PF15615 YPDSF_RS04470 YPDSF_RS04475 PF13419 Haloacid dehalogenase-like hydrolase YPDSF_RS04480 PF13710 ACT domain YPDSF_RS04485 PF00205 Thiamine pyrophosphate enzyme, central domain YPDSF_RS04485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPDSF_RS04485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPDSF_RS04490 PF07313 Protein of unknown function (DUF1460) YPDSF_RS04500 PF07520 YPDSF_RS04500 YPDSF_RS04510 PF01048 Phosphorylase superfamily YPDSF_RS04510 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus YPDSF_RS04515 PF00005 ABC transporter YPDSF_RS04520 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS04525 PF13379 NMT1-like family YPDSF_RS04530 PF13407 Periplasmic binding protein domain YPDSF_RS04540 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS04540 PF13377 Periplasmic binding protein-like domain YPDSF_RS04550 PF06649 YPDSF_RS04550 YPDSF_RS04555 PF00654 Voltage gated chloride channel YPDSF_RS04560 PF13500 AAA domain YPDSF_RS04565 PF00480 ROK family YPDSF_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS04570 PF03466 LysR substrate binding domain YPDSF_RS04580 PF05472 DNA replication terminus site-binding protein (Ter protein) YPDSF_RS04585 PF00206 Lyase YPDSF_RS04585 PF10415 Fumarase C C-terminus YPDSF_RS04590 PF01238 Phosphomannose isomerase type I YPDSF_RS04595 PF06097 YPDSF_RS04595 YPDSF_RS04605 PF13593 SBF-like CPA transporter family (DUF4137) YPDSF_RS04610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPDSF_RS04610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YPDSF_RS04615 PF02311 AraC-like ligand binding domain YPDSF_RS04615 PF12833 Helix-turn-helix domain YPDSF_RS04625 PF00005 ABC transporter YPDSF_RS04630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPDSF_RS04635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPDSF_RS04635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPDSF_RS04640 PF02610 L-arabinose isomerase YPDSF_RS04640 PF11762 L-arabinose isomerase C-terminal domain YPDSF_RS04645 PF00005 ABC transporter YPDSF_RS04645 PF00664 ABC transporter transmembrane region YPDSF_RS04645 PF03412 Peptidase C39 family YPDSF_RS04650 PF00529 HlyD family secretion protein YPDSF_RS04655 PF13533 Biotin-lipoyl like YPDSF_RS04665 PF00005 ABC transporter YPDSF_RS04665 PF00664 ABC transporter transmembrane region YPDSF_RS04670 PF10754 YPDSF_RS04670 YPDSF_RS04675 PF02508 YPDSF_RS04675 YPDSF_RS04680 PF04060 Putative Fe-S cluster YPDSF_RS04680 PF14697 4Fe-4S dicluster domain YPDSF_RS04685 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YPDSF_RS04685 PF10531 SLBB domain YPDSF_RS04685 PF13237 4Fe-4S dicluster domain YPDSF_RS04685 PF13375 RnfC Barrel sandwich hybrid domain YPDSF_RS04690 PF06445 GyrI-like small molecule binding domain YPDSF_RS04690 PF12833 Helix-turn-helix domain YPDSF_RS04695 PF03116 YPDSF_RS04695 YPDSF_RS04700 PF04205 FMN-binding domain YPDSF_RS04705 PF02508 YPDSF_RS04705 YPDSF_RS04710 PF00633 Helix-hairpin-helix motif YPDSF_RS04710 PF00730 HhH-GPD superfamily base excision DNA repair protein YPDSF_RS04710 PF10576 Iron-sulfur binding domain of endonuclease III YPDSF_RS04715 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS04720 PF07690 Major Facilitator Superfamily YPDSF_RS04725 PF00575 S1 RNA binding domain YPDSF_RS04725 PF00773 RNB domain YPDSF_RS04725 PF08206 Ribonuclease B OB domain YPDSF_RS04730 PF02554 YPDSF_RS04730 YPDSF_RS04730 PF13722 YPDSF_RS04730 YPDSF_RS04735 PF04328 YPDSF_RS04735 YPDSF_RS04740 PF00923 Transaldolase YPDSF_RS04745 PF09932 YPDSF_RS04745 YPDSF_RS04750 PF00596 Class II Aldolase and Adducin N-terminal domain YPDSF_RS04760 PF01253 Translation initiation factor SUI1 YPDSF_RS04765 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family YPDSF_RS04775 PF13176 Tetratricopeptide repeat YPDSF_RS04775 PF14559 Tetratricopeptide repeat YPDSF_RS04780 PF06305 YPDSF_RS04780 YPDSF_RS04785 PF01569 PAP2 superfamily YPDSF_RS04790 PF00925 GTP cyclohydrolase II YPDSF_RS04795 PF00330 Aconitase family (aconitate hydratase) YPDSF_RS04795 PF00694 Aconitase C-terminal domain YPDSF_RS04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS04805 PF03466 LysR substrate binding domain YPDSF_RS04810 PF01797 Transposase IS200 like YPDSF_RS04820 PF01131 DNA topoisomerase YPDSF_RS04820 PF01396 YPDSF_RS04820 YPDSF_RS04820 PF01751 Toprim domain YPDSF_RS04820 PF08272 Topoisomerase I zinc-ribbon-like YPDSF_RS04830 PF10692 Protein of unknown function (DUF2498) YPDSF_RS04835 PF01343 Peptidase family S49 YPDSF_RS04835 PF08496 YPDSF_RS04835 YPDSF_RS04840 PF00106 short chain dehydrogenase YPDSF_RS04845 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YPDSF_RS04845 PF12557 Cob(I)alamin adenosyltransferase N terminal YPDSF_RS04850 PF00849 RNA pseudouridylate synthase YPDSF_RS04850 PF01479 S4 domain YPDSF_RS04855 PF01300 Telomere recombination YPDSF_RS04860 PF02811 PHP domain YPDSF_RS04870 PF08255 YPDSF_RS04870 YPDSF_RS04875 PF00425 chorismate binding enzyme YPDSF_RS04875 PF04715 Anthranilate synthase component I, N terminal region YPDSF_RS04880 PF00117 Glutamine amidotransferase class-I YPDSF_RS04885 PF00591 Glycosyl transferase family, a/b domain YPDSF_RS04885 PF02885 Glycosyl transferase family, helical bundle domain YPDSF_RS04890 PF00218 Indole-3-glycerol phosphate synthase YPDSF_RS04890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase YPDSF_RS04895 PF00291 Pyridoxal-phosphate dependent enzyme YPDSF_RS04900 PF00290 Tryptophan synthase alpha chain YPDSF_RS04905 PF04972 BON domain YPDSF_RS04910 PF03922 OmpW family YPDSF_RS04920 PF06790 YPDSF_RS04920 YPDSF_RS04925 PF01740 STAS domain YPDSF_RS04930 PF00916 YPDSF_RS04930 YPDSF_RS04935 PF04279 YPDSF_RS04935 YPDSF_RS04940 PF03061 Thioesterase superfamily YPDSF_RS04945 PF00872 YPDSF_RS04945 YPDSF_RS04950 PF03544 Gram-negative bacterial TonB protein C-terminal YPDSF_RS04950 PF16031 YPDSF_RS04950 YPDSF_RS04955 PF03795 YCII-related domain YPDSF_RS04960 PF13453 YPDSF_RS04960 YPDSF_RS04970 PF13505 Outer membrane protein beta-barrel domain YPDSF_RS04975 PF13091 PLD-like domain YPDSF_RS04975 PF13396 YPDSF_RS04975 YPDSF_RS04980 PF04269 Protein of unknown function, DUF440 YPDSF_RS04995 PF00005 ABC transporter YPDSF_RS04995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPDSF_RS05000 PF00005 ABC transporter YPDSF_RS05000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPDSF_RS05005 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS05005 PF12911 YPDSF_RS05005 YPDSF_RS05010 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS05015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPDSF_RS05020 PF01914 YPDSF_RS05020 YPDSF_RS05025 PF00171 Aldehyde dehydrogenase family YPDSF_RS05025 PF00465 Iron-containing alcohol dehydrogenase YPDSF_RS05030 PF00265 Thymidine kinase YPDSF_RS05035 PF00816 H-NS histone family YPDSF_RS05040 PF00872 YPDSF_RS05040 YPDSF_RS05045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YPDSF_RS05045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YPDSF_RS05045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YPDSF_RS05050 PF00072 Response regulator receiver domain YPDSF_RS05055 PF02810 SEC-C motif YPDSF_RS05060 PF00551 Formyl transferase YPDSF_RS05060 PF01842 ACT domain YPDSF_RS05070 PF00872 YPDSF_RS05070 YPDSF_RS05075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS05080 PF03372 Endonuclease/Exonuclease/phosphatase family YPDSF_RS05085 PF00293 NUDIX domain YPDSF_RS05090 PF07383 YPDSF_RS05090 YPDSF_RS05095 PF01131 DNA topoisomerase YPDSF_RS05095 PF01751 Toprim domain YPDSF_RS05100 PF00586 AIR synthase related protein, N-terminal domain YPDSF_RS05100 PF02769 AIR synthase related protein, C-terminal domain YPDSF_RS05105 PF00881 Nitroreductase family YPDSF_RS05110 PF01343 Peptidase family S49 YPDSF_RS05115 PF00710 Asparaginase YPDSF_RS05120 PF00857 Isochorismatase family YPDSF_RS05125 PF07023 YPDSF_RS05125 YPDSF_RS05130 PF01641 SelR domain YPDSF_RS05135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YPDSF_RS05135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YPDSF_RS05140 PF01263 Aldose 1-epimerase YPDSF_RS05145 PF06629 YPDSF_RS05145 YPDSF_RS05150 PF06798 YPDSF_RS05150 YPDSF_RS05150 PF08298 PrkA AAA domain YPDSF_RS05155 PF04285 YPDSF_RS05155 YPDSF_RS05160 PF00892 EamA-like transporter family YPDSF_RS05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS05165 PF03466 LysR substrate binding domain YPDSF_RS05170 PF02678 Pirin YPDSF_RS05170 PF05726 Pirin C-terminal cupin domain YPDSF_RS05175 PF07690 Major Facilitator Superfamily YPDSF_RS05180 PF01266 FAD dependent oxidoreductase YPDSF_RS05185 PF04293 YPDSF_RS05185 YPDSF_RS05190 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS05190 PF07840 FadR C-terminal domain YPDSF_RS05195 PF06450 YPDSF_RS05195 YPDSF_RS05200 PF02600 Disulfide bond formation protein DsbB YPDSF_RS05215 PF00266 Aminotransferase class-V YPDSF_RS05230 PF02413 YPDSF_RS05230 YPDSF_RS05245 PF09327 YPDSF_RS05245 YPDSF_RS05245 PF13550 YPDSF_RS05245 YPDSF_RS05260 PF06805 YPDSF_RS05260 YPDSF_RS05270 PF13248 YPDSF_RS05270 YPDSF_RS05275 PF02498 YPDSF_RS05275 YPDSF_RS05285 PF03869 Arc-like DNA binding domain YPDSF_RS05295 PF00877 NlpC/P60 family YPDSF_RS05295 PF14464 Prokaryotic homologs of the JAB domain YPDSF_RS05300 PF05100 YPDSF_RS05300 YPDSF_RS05305 PF01797 Transposase IS200 like YPDSF_RS05315 PF01797 Transposase IS200 like YPDSF_RS05325 PF05939 YPDSF_RS05325 YPDSF_RS05330 PF06791 YPDSF_RS05330 YPDSF_RS05330 PF09718 YPDSF_RS05330 YPDSF_RS05335 PF08809 YPDSF_RS05335 YPDSF_RS05340 PF08748 YPDSF_RS05340 YPDSF_RS05345 PF02368 Bacterial Ig-like domain (group 2) YPDSF_RS05345 PF08813 YPDSF_RS05345 YPDSF_RS05350 PF13554 Bacteriophage related domain of unknown function YPDSF_RS05375 PF02368 Bacterial Ig-like domain (group 2) YPDSF_RS05390 PF13264 YPDSF_RS05390 YPDSF_RS05405 PF10045 YPDSF_RS05405 YPDSF_RS05415 PF03374 YPDSF_RS05415 YPDSF_RS05420 PF03245 YPDSF_RS05420 YPDSF_RS05425 PF00959 Phage lysozyme YPDSF_RS05430 PF16080 YPDSF_RS05430 YPDSF_RS05450 PF02498 YPDSF_RS05450 YPDSF_RS05455 PF10554 YPDSF_RS05455 YPDSF_RS05460 PF06530 YPDSF_RS05460 YPDSF_RS05465 PF05766 YPDSF_RS05465 YPDSF_RS05470 PF05772 NinB protein YPDSF_RS05475 PF02086 D12 class N6 adenine-specific DNA methyltransferase YPDSF_RS05480 PF06806 Putative excisionase (DUF1233) YPDSF_RS05485 PF01695 IstB-like ATP binding protein YPDSF_RS05490 PF00665 Integrase core domain YPDSF_RS05490 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS05495 PF00589 Phage integrase family YPDSF_RS05495 PF12167 YPDSF_RS05495 YPDSF_RS05500 PF03692 YPDSF_RS05500 YPDSF_RS05505 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPDSF_RS05510 PF13406 Transglycosylase SLT domain YPDSF_RS05515 PF05166 YcgL domain YPDSF_RS05520 PF03775 Septum formation inhibitor MinC, C-terminal domain YPDSF_RS05520 PF05209 Septum formation inhibitor MinC, N-terminal domain YPDSF_RS05525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YPDSF_RS05530 PF03776 Septum formation topological specificity factor MinE YPDSF_RS05535 PF00570 HRDC domain YPDSF_RS05535 PF01612 3'-5' exonuclease YPDSF_RS05540 PF00501 AMP-binding enzyme YPDSF_RS05540 PF13193 AMP-binding enzyme C-terminal domain YPDSF_RS05550 PF00814 Glycoprotease family YPDSF_RS05555 PF00270 DEAD/DEAH box helicase YPDSF_RS05555 PF06733 DEAD_2 YPDSF_RS05555 PF13307 Helicase C-terminal domain YPDSF_RS05560 PF01042 Endoribonuclease L-PSP YPDSF_RS05565 PF00893 Small Multidrug Resistance protein YPDSF_RS05570 PF00893 Small Multidrug Resistance protein YPDSF_RS05575 PF01081 KDPG and KHG aldolase YPDSF_RS05580 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YPDSF_RS05580 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YPDSF_RS05585 PF01380 SIS domain YPDSF_RS05585 PF01418 Helix-turn-helix domain, rpiR family YPDSF_RS05590 PF00224 Pyruvate kinase, barrel domain YPDSF_RS05590 PF02887 Pyruvate kinase, alpha/beta domain YPDSF_RS05595 PF03279 YPDSF_RS05595 YPDSF_RS05600 PF01551 Peptidase family M23 YPDSF_RS05600 PF04225 Opacity-associated protein A LysM-like domain YPDSF_RS05600 PF08525 YPDSF_RS05600 YPDSF_RS05605 PF01297 Periplasmic solute binding protein family YPDSF_RS05610 PF00005 ABC transporter YPDSF_RS05615 PF00950 YPDSF_RS05615 YPDSF_RS05620 PF05491 Holliday junction DNA helicase ruvB C-terminus YPDSF_RS05620 PF05496 Holliday junction DNA helicase ruvB N-terminus YPDSF_RS05625 PF01330 RuvA N terminal domain YPDSF_RS05625 PF07499 RuvA, C-terminal domain YPDSF_RS05625 PF14520 Helix-hairpin-helix domain YPDSF_RS05630 PF02075 Crossover junction endodeoxyribonuclease RuvC YPDSF_RS05635 PF01709 Transcriptional regulator YPDSF_RS05640 PF00293 NUDIX domain YPDSF_RS05645 PF00152 tRNA synthetases class II (D, K and N) YPDSF_RS05645 PF01336 OB-fold nucleic acid binding domain YPDSF_RS05645 PF02938 GAD domain YPDSF_RS05650 PF01904 Protein of unknown function DUF72 YPDSF_RS05655 PF01124 MAPEG family YPDSF_RS05660 PF13649 Methyltransferase domain YPDSF_RS05665 PF08003 Protein of unknown function (DUF1698) YPDSF_RS05670 PF03932 CutC family YPDSF_RS05675 PF06185 YecM protein YPDSF_RS05680 PF00750 tRNA synthetases class I (R) YPDSF_RS05680 PF03485 Arginyl tRNA synthetase N terminal domain YPDSF_RS05680 PF05746 DALR anticodon binding domain YPDSF_RS05685 PF05860 haemagglutination activity domain YPDSF_RS05685 PF13332 YPDSF_RS05685 YPDSF_RS05690 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPDSF_RS05690 PF08479 POTRA domain, ShlB-type YPDSF_RS05695 PF03023 YPDSF_RS05695 YPDSF_RS05700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPDSF_RS05705 PF13302 Acetyltransferase (GNAT) domain YPDSF_RS05710 PF07690 Major Facilitator Superfamily YPDSF_RS05715 PF07273 Protein of unknown function (DUF1439) YPDSF_RS05720 PF02613 Nitrate reductase delta subunit YPDSF_RS05725 PF02811 PHP domain YPDSF_RS05735 PF00480 ROK family YPDSF_RS05735 PF13412 Winged helix-turn-helix DNA-binding YPDSF_RS05740 PF03009 Glycerophosphoryl diester phosphodiesterase family YPDSF_RS05745 PF00005 ABC transporter YPDSF_RS05750 PF01797 Transposase IS200 like YPDSF_RS05755 PF00005 ABC transporter YPDSF_RS05760 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS05765 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS05770 PF13416 Bacterial extracellular solute-binding protein YPDSF_RS05775 PF03009 Glycerophosphoryl diester phosphodiesterase family YPDSF_RS05790 PF00916 YPDSF_RS05790 YPDSF_RS05790 PF01740 STAS domain YPDSF_RS05795 PF00793 DAHP synthetase I family YPDSF_RS05800 PF13369 YPDSF_RS05800 YPDSF_RS05800 PF13371 Tetratricopeptide repeat YPDSF_RS05805 PF04247 YPDSF_RS05805 YPDSF_RS05810 PF13847 Methyltransferase domain YPDSF_RS05815 PF00472 RF-1 domain YPDSF_RS05815 PF03462 PCRF domain YPDSF_RS05820 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain YPDSF_RS05820 PF01488 Shikimate / quinate 5-dehydrogenase YPDSF_RS05820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain YPDSF_RS05825 PF03550 Outer membrane lipoprotein LolB YPDSF_RS05830 PF00288 GHMP kinases N terminal domain YPDSF_RS05830 PF08544 GHMP kinases C terminal YPDSF_RS05840 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YPDSF_RS05840 PF14572 Phosphoribosyl synthetase-associated domain YPDSF_RS05850 PF10762 YPDSF_RS05850 YPDSF_RS05855 PF01195 Peptidyl-tRNA hydrolase YPDSF_RS05860 PF01926 50S ribosome-binding GTPase YPDSF_RS05860 PF06071 Protein of unknown function (DUF933) YPDSF_RS05870 PF00665 Integrase core domain YPDSF_RS05875 PF00581 Rhodanese-like domain YPDSF_RS05880 PF07859 alpha/beta hydrolase fold YPDSF_RS05890 PF13316 YPDSF_RS05890 YPDSF_RS05895 PF14358 YPDSF_RS05895 YPDSF_RS05900 PF12682 Flavodoxin YPDSF_RS05905 PF01738 Dienelactone hydrolase family YPDSF_RS05910 PF00072 Response regulator receiver domain YPDSF_RS05915 PF00665 Integrase core domain YPDSF_RS05915 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS05920 PF01695 IstB-like ATP binding protein YPDSF_RS05925 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS05930 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS05930 PF00672 HAMP domain YPDSF_RS05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS05935 PF02627 Carboxymuconolactone decarboxylase family YPDSF_RS05940 PF07883 Cupin domain YPDSF_RS05945 PF12697 Alpha/beta hydrolase family YPDSF_RS05950 PF13646 HEAT repeats YPDSF_RS05965 PF00106 short chain dehydrogenase YPDSF_RS05970 PF08242 Methyltransferase domain YPDSF_RS05975 PF02502 Ribose/Galactose Isomerase YPDSF_RS05975 PF12408 Ribose-5-phosphate isomerase YPDSF_RS05985 PF13226 YPDSF_RS05985 YPDSF_RS05990 PF07661 YPDSF_RS05990 YPDSF_RS05990 PF08238 Sel1 repeat YPDSF_RS05995 PF00872 YPDSF_RS05995 YPDSF_RS06010 PF04101 Glycosyltransferase family 28 C-terminal domain YPDSF_RS06020 PF13506 Glycosyl transferase family 21 YPDSF_RS06025 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS06035 PF00753 Metallo-beta-lactamase superfamily YPDSF_RS06040 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS06045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YPDSF_RS06050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPDSF_RS06055 PF00425 chorismate binding enzyme YPDSF_RS06060 PF05962 HutD YPDSF_RS06065 PF01979 Amidohydrolase family YPDSF_RS06070 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS06070 PF07702 UTRA domain YPDSF_RS06075 PF01979 Amidohydrolase family YPDSF_RS06080 PF00665 Integrase core domain YPDSF_RS06080 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS06085 PF01695 IstB-like ATP binding protein YPDSF_RS06090 PF05013 N-formylglutamate amidohydrolase YPDSF_RS06095 PF00872 YPDSF_RS06095 YPDSF_RS06100 PF00267 Gram-negative porin YPDSF_RS06105 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YPDSF_RS06110 PF04996 Succinylarginine dihydrolase YPDSF_RS06115 PF00171 Aldehyde dehydrogenase family YPDSF_RS06120 PF04958 Arginine N-succinyltransferase beta subunit YPDSF_RS06125 PF00202 Aminotransferase class-III YPDSF_RS06135 PF00155 Aminotransferase class I and II YPDSF_RS06135 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS06140 PF00672 HAMP domain YPDSF_RS06140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS06140 PF07730 Histidine kinase YPDSF_RS06140 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YPDSF_RS06145 PF01699 Sodium/calcium exchanger protein YPDSF_RS06150 PF02562 PhoH-like protein YPDSF_RS06160 PF13302 Acetyltransferase (GNAT) domain YPDSF_RS06165 PF13994 YPDSF_RS06165 YPDSF_RS06170 PF00535 Glycosyl transferase family 2 YPDSF_RS06175 PF01522 Polysaccharide deacetylase YPDSF_RS06175 PF14883 Hypothetical glycosyl hydrolase family 13 YPDSF_RS06185 PF00557 Metallopeptidase family M24 YPDSF_RS06185 PF01321 Creatinase/Prolidase N-terminal domain YPDSF_RS06190 PF03848 Tellurite resistance protein TehB YPDSF_RS06190 PF09313 Domain of unknown function (DUF1971) YPDSF_RS06195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YPDSF_RS06200 PF00578 AhpC/TSA family YPDSF_RS06205 PF00005 ABC transporter YPDSF_RS06210 PF02687 YPDSF_RS06210 YPDSF_RS06210 PF12704 MacB-like periplasmic core domain YPDSF_RS06215 PF02687 YPDSF_RS06215 YPDSF_RS06220 PF04945 YHS domain YPDSF_RS06220 PF10080 YPDSF_RS06220 YPDSF_RS06225 PF10634 Fe2+ transport protein YPDSF_RS06235 PF07690 Major Facilitator Superfamily YPDSF_RS06240 PF04960 Glutaminase YPDSF_RS06245 PF00455 YPDSF_RS06245 YPDSF_RS06245 PF08220 DeoR-like helix-turn-helix domain YPDSF_RS06250 PF00324 Amino acid permease YPDSF_RS06255 PF00155 Aminotransferase class I and II YPDSF_RS06260 PF02508 YPDSF_RS06260 YPDSF_RS06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS06265 PF03466 LysR substrate binding domain YPDSF_RS06270 PF04909 Amidohydrolase YPDSF_RS06275 PF07690 Major Facilitator Superfamily YPDSF_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS06290 PF03466 LysR substrate binding domain YPDSF_RS06295 PF03328 HpcH/HpaI aldolase/citrate lyase family YPDSF_RS06300 PF01575 MaoC like domain YPDSF_RS06305 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain YPDSF_RS06305 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain YPDSF_RS06310 PF00072 Response regulator receiver domain YPDSF_RS06310 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS06315 PF00072 Response regulator receiver domain YPDSF_RS06315 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS06315 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS06320 PF00419 Fimbrial protein YPDSF_RS06325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS06325 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS06330 PF00577 Outer membrane usher protein YPDSF_RS06330 PF13953 PapC C-terminal domain YPDSF_RS06330 PF13954 PapC N-terminal domain YPDSF_RS06335 PF00419 Fimbrial protein YPDSF_RS06340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS06345 PF00872 YPDSF_RS06345 YPDSF_RS06350 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS06360 PF00589 Phage integrase family YPDSF_RS06360 PF13356 Domain of unknown function (DUF4102) YPDSF_RS06360 PF14659 Phage integrase, N-terminal SAM-like domain YPDSF_RS06365 PF00425 chorismate binding enzyme YPDSF_RS06370 PF07690 Major Facilitator Superfamily YPDSF_RS06375 PF00005 ABC transporter YPDSF_RS06375 PF00664 ABC transporter transmembrane region YPDSF_RS06380 PF00005 ABC transporter YPDSF_RS06380 PF00664 ABC transporter transmembrane region YPDSF_RS06385 PF12833 Helix-turn-helix domain YPDSF_RS06390 PF00501 AMP-binding enzyme YPDSF_RS06390 PF00550 Phosphopantetheine attachment site YPDSF_RS06390 PF00668 Condensation domain YPDSF_RS06390 PF08242 Methyltransferase domain YPDSF_RS06390 PF08415 YPDSF_RS06390 YPDSF_RS06395 PF00109 Beta-ketoacyl synthase, N-terminal domain YPDSF_RS06395 PF00550 Phosphopantetheine attachment site YPDSF_RS06395 PF00668 Condensation domain YPDSF_RS06395 PF00698 Acyl transferase domain YPDSF_RS06395 PF00975 Thioesterase domain YPDSF_RS06395 PF02801 Beta-ketoacyl synthase, C-terminal domain YPDSF_RS06395 PF08242 Methyltransferase domain YPDSF_RS06395 PF08415 YPDSF_RS06395 YPDSF_RS06395 PF08659 KR domain YPDSF_RS06395 PF16197 YPDSF_RS06395 YPDSF_RS06400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPDSF_RS06405 PF00975 Thioesterase domain YPDSF_RS06410 PF00501 AMP-binding enzyme YPDSF_RS06410 PF13193 AMP-binding enzyme C-terminal domain YPDSF_RS06415 PF00593 TonB dependent receptor YPDSF_RS06415 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS06430 PF05930 Prophage CP4-57 regulatory protein (AlpA) YPDSF_RS06440 PF11198 YPDSF_RS06440 YPDSF_RS06450 PF05321 Haemolysin expression modulating protein YPDSF_RS06455 PF01695 IstB-like ATP binding protein YPDSF_RS06460 PF00665 Integrase core domain YPDSF_RS06460 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS06490 PF00005 ABC transporter YPDSF_RS06495 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS06500 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS06505 PF01547 Bacterial extracellular solute-binding protein YPDSF_RS06510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPDSF_RS06520 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS06520 PF07702 UTRA domain YPDSF_RS06545 PF13676 TIR domain YPDSF_RS06550 PF14384 YPDSF_RS06550 YPDSF_RS06555 PF04365 Protein of unknown function (DUF497) YPDSF_RS06560 PF04717 Phage-related baseplate assembly protein YPDSF_RS06565 PF04965 Gene 25-like lysozyme YPDSF_RS06580 PF10908 YPDSF_RS06580 YPDSF_RS06595 PF01527 Transposase YPDSF_RS06600 PF00665 Integrase core domain YPDSF_RS06600 PF13565 YPDSF_RS06600 YPDSF_RS06605 PF05638 Protein of unknown function (DUF796) YPDSF_RS06625 PF03796 DnaB-like helicase C terminal domain YPDSF_RS06650 PF01066 CDP-alcohol phosphatidyltransferase YPDSF_RS06655 PF01541 GIY-YIG catalytic domain YPDSF_RS06655 PF02151 UvrB/uvrC motif YPDSF_RS06655 PF08459 UvrC Helix-hairpin-helix N-terminal YPDSF_RS06655 PF14520 Helix-hairpin-helix domain YPDSF_RS06660 PF00072 Response regulator receiver domain YPDSF_RS06660 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS06665 PF10769 YPDSF_RS06665 YPDSF_RS06670 PF06942 YPDSF_RS06670 YPDSF_RS06680 PF13505 Outer membrane protein beta-barrel domain YPDSF_RS06690 PF00324 Amino acid permease YPDSF_RS06695 PF01344 Kelch motif YPDSF_RS06700 PF03358 NADPH-dependent FMN reductase YPDSF_RS06705 PF04261 Dyp-type peroxidase family YPDSF_RS06710 PF09375 Imelysin YPDSF_RS06710 PF13473 Cupredoxin-like domain YPDSF_RS06715 PF03239 YPDSF_RS06715 YPDSF_RS06720 PF00474 Sodium:solute symporter family YPDSF_RS06730 PF00171 Aldehyde dehydrogenase family YPDSF_RS06730 PF01619 Proline dehydrogenase YPDSF_RS06730 PF14850 DNA-binding domain of Proline dehydrogenase YPDSF_RS06745 PF00005 ABC transporter YPDSF_RS06750 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS06760 PF00291 Pyridoxal-phosphate dependent enzyme YPDSF_RS06765 PF02899 Phage integrase, N-terminal SAM-like domain YPDSF_RS06770 PF04539 Sigma-70 region 3 YPDSF_RS06770 PF04542 Sigma-70 region 2 YPDSF_RS06770 PF04545 Sigma-70, region 4 YPDSF_RS06775 PF00669 Bacterial flagellin N-terminal helical region YPDSF_RS06775 PF00700 Bacterial flagellin C-terminal helical region YPDSF_RS06780 PF02465 YPDSF_RS06780 YPDSF_RS06780 PF07195 YPDSF_RS06780 YPDSF_RS06780 PF07196 Flagellin hook IN motif YPDSF_RS06785 PF02561 Flagellar protein FliS YPDSF_RS06790 PF05400 Flagellar protein FliT YPDSF_RS06800 PF12833 Helix-turn-helix domain YPDSF_RS06805 PF13487 HD domain YPDSF_RS06810 PF00730 HhH-GPD superfamily base excision DNA repair protein YPDSF_RS06815 PF02661 Fic/DOC family YPDSF_RS06825 PF02049 YPDSF_RS06825 YPDSF_RS06830 PF01514 Secretory protein of YscJ/FliF family YPDSF_RS06830 PF08345 YPDSF_RS06830 YPDSF_RS06835 PF01706 FliG C-terminal domain YPDSF_RS06835 PF14841 FliG middle domain YPDSF_RS06835 PF14842 FliG N-terminal domain YPDSF_RS06845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPDSF_RS06850 PF02050 Flagellar FliJ protein YPDSF_RS06855 PF02120 Flagellar hook-length control protein FliK YPDSF_RS06860 PF03748 YPDSF_RS06860 YPDSF_RS06865 PF01052 Surface presentation of antigens (SPOA) YPDSF_RS06865 PF02154 Flagellar motor switch protein FliM YPDSF_RS06870 PF01052 Surface presentation of antigens (SPOA) YPDSF_RS06870 PF16973 YPDSF_RS06870 YPDSF_RS06875 PF04347 YPDSF_RS06875 YPDSF_RS06880 PF00813 YPDSF_RS06880 YPDSF_RS06885 PF01313 YPDSF_RS06885 YPDSF_RS06890 PF01311 YPDSF_RS06890 YPDSF_RS06895 PF07927 YcfA-like protein YPDSF_RS06900 PF15919 YPDSF_RS06900 YPDSF_RS06905 PF00294 pfkB family carbohydrate kinase YPDSF_RS06910 PF02653 YPDSF_RS06910 YPDSF_RS06915 PF00005 ABC transporter YPDSF_RS06920 PF13407 Periplasmic binding protein domain YPDSF_RS06925 PF02653 YPDSF_RS06925 YPDSF_RS06930 PF00596 Class II Aldolase and Adducin N-terminal domain YPDSF_RS06930 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS06935 PF04198 Putative sugar-binding domain YPDSF_RS06940 PF00669 Bacterial flagellin N-terminal helical region YPDSF_RS06945 PF00460 Flagella basal body rod protein YPDSF_RS06945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPDSF_RS06950 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YPDSF_RS06950 PF10135 YPDSF_RS06950 YPDSF_RS06955 PF02119 YPDSF_RS06955 YPDSF_RS06960 PF02107 YPDSF_RS06960 YPDSF_RS06970 PF00460 Flagella basal body rod protein YPDSF_RS06975 PF00460 Flagella basal body rod protein YPDSF_RS06975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPDSF_RS06975 PF07559 Flagellar basal body protein FlaE YPDSF_RS06980 PF03963 YPDSF_RS06980 YPDSF_RS06980 PF13860 FlgD Ig-like domain YPDSF_RS06980 PF13861 FlgD Tudor-like domain YPDSF_RS06985 PF00460 Flagella basal body rod protein YPDSF_RS06985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YPDSF_RS06990 PF00460 Flagella basal body rod protein YPDSF_RS06995 PF13144 SAF-like YPDSF_RS07000 PF04316 Anti-sigma-28 factor, FlgM YPDSF_RS07005 PF05130 FlgN protein YPDSF_RS07010 PF02369 Bacterial Ig-like domain (group 1) YPDSF_RS07010 PF07979 Intimin C-type lectin domain YPDSF_RS07010 PF09134 Invasin, domain 3 YPDSF_RS07010 PF11924 Protein of unknown function (DUF3442) YPDSF_RS07015 PF01797 Transposase IS200 like YPDSF_RS07020 PF11924 Protein of unknown function (DUF3442) YPDSF_RS07025 PF06366 YPDSF_RS07025 YPDSF_RS07030 PF00771 FHIPEP family YPDSF_RS07035 PF01312 FlhB HrpN YscU SpaS Family YPDSF_RS07045 PF07377 Protein of unknown function (DUF1493) YPDSF_RS07055 PF10709 YPDSF_RS07055 YPDSF_RS07060 PF05425 YPDSF_RS07060 YPDSF_RS07065 PF04234 CopC domain YPDSF_RS07070 PF00210 Ferritin-like domain YPDSF_RS07075 PF06440 DNA polymerase III, theta subunit YPDSF_RS07080 PF00561 alpha/beta hydrolase fold YPDSF_RS07085 PF00326 Prolyl oligopeptidase family YPDSF_RS07085 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YPDSF_RS07090 PF13995 YebF-like protein YPDSF_RS07095 PF04266 ASCH domain YPDSF_RS07100 PF07130 YebG protein YPDSF_RS07105 PF00270 DEAD/DEAH box helicase YPDSF_RS07105 PF00271 Helicase conserved C-terminal domain YPDSF_RS07105 PF03880 DbpA RNA binding domain YPDSF_RS07110 PF02222 ATP-grasp domain YPDSF_RS07115 PF03701 YPDSF_RS07115 YPDSF_RS07120 PF00425 chorismate binding enzyme YPDSF_RS07120 PF04715 Anthranilate synthase component I, N terminal region YPDSF_RS07125 PF00293 NUDIX domain YPDSF_RS07130 PF03313 YPDSF_RS07130 YPDSF_RS07130 PF03315 Serine dehydratase beta chain YPDSF_RS07135 PF01613 Flavin reductase like domain YPDSF_RS07140 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal YPDSF_RS07140 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal YPDSF_RS07145 PF07690 Major Facilitator Superfamily YPDSF_RS07145 PF11700 YPDSF_RS07145 YPDSF_RS07150 PF03328 HpcH/HpaI aldolase/citrate lyase family YPDSF_RS07160 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase YPDSF_RS07165 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YPDSF_RS07170 PF00171 Aldehyde dehydrogenase family YPDSF_RS07175 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPDSF_RS07180 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPDSF_RS07185 PF01047 MarR family YPDSF_RS07195 PF03610 PTS system fructose IIA component YPDSF_RS07195 PF03830 PTS system sorbose subfamily IIB component YPDSF_RS07200 PF03609 YPDSF_RS07200 YPDSF_RS07205 PF03613 YPDSF_RS07205 YPDSF_RS07210 PF06173 YPDSF_RS07210 YPDSF_RS07215 PF02659 YPDSF_RS07215 YPDSF_RS07220 PF00593 TonB dependent receptor YPDSF_RS07220 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS07225 PF00989 PAS fold YPDSF_RS07225 PF00990 GGDEF domain YPDSF_RS07225 PF13426 PAS domain YPDSF_RS07235 PF13847 Methyltransferase domain YPDSF_RS07240 PF02578 Multi-copper polyphenol oxidoreductase laccase YPDSF_RS07245 PF00313 'Cold-shock' DNA-binding domain YPDSF_RS07250 PF10736 YPDSF_RS07250 YPDSF_RS07260 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP YPDSF_RS07265 PF00324 Amino acid permease YPDSF_RS07270 PF13269 YPDSF_RS07270 YPDSF_RS07275 PF10765 Protein of unknown function (DUF2591) YPDSF_RS07280 PF13974 YPDSF_RS07280 YPDSF_RS07285 PF13996 YPDSF_RS07285 YPDSF_RS07290 PF10964 YPDSF_RS07290 YPDSF_RS07300 PF12833 Helix-turn-helix domain YPDSF_RS07310 PF00005 ABC transporter YPDSF_RS07310 PF00664 ABC transporter transmembrane region YPDSF_RS07315 PF01797 Transposase IS200 like YPDSF_RS07325 PF01163 RIO1 family YPDSF_RS07330 PF03795 YCII-related domain YPDSF_RS07335 PF06167 Glucose-regulated metallo-peptidase M90 YPDSF_RS07345 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS07345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPDSF_RS07350 PF01306 LacY proton/sugar symporter YPDSF_RS07355 PF02065 Melibiase YPDSF_RS07355 PF16875 YPDSF_RS07355 YPDSF_RS07365 PF01648 4'-phosphopantetheinyl transferase superfamily YPDSF_RS07370 PF03480 Bacterial extracellular solute-binding protein, family 7 YPDSF_RS07375 PF04290 YPDSF_RS07375 YPDSF_RS07380 PF06808 YPDSF_RS07380 YPDSF_RS07385 PF00072 Response regulator receiver domain YPDSF_RS07385 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS07395 PF09831 YPDSF_RS07395 YPDSF_RS07405 PF01522 Polysaccharide deacetylase YPDSF_RS07410 PF07690 Major Facilitator Superfamily YPDSF_RS07415 PF01554 MatE YPDSF_RS07420 PF00764 Arginosuccinate synthase YPDSF_RS07425 PF01070 FMN-dependent dehydrogenase YPDSF_RS07430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YPDSF_RS07430 PF13378 Enolase C-terminal domain-like YPDSF_RS07435 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPDSF_RS07440 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS07445 PF04134 YPDSF_RS07445 YPDSF_RS07450 PF07690 Major Facilitator Superfamily YPDSF_RS07455 PF02369 Bacterial Ig-like domain (group 1) YPDSF_RS07455 PF09134 Invasin, domain 3 YPDSF_RS07455 PF11924 Protein of unknown function (DUF3442) YPDSF_RS07460 PF00872 YPDSF_RS07460 YPDSF_RS07465 PF04363 YPDSF_RS07465 YPDSF_RS07470 PF07993 Male sterility protein YPDSF_RS07475 PF00929 Exonuclease YPDSF_RS07475 PF08411 Exonuclease C-terminal YPDSF_RS07480 PF13520 Amino acid permease YPDSF_RS07490 PF00465 Iron-containing alcohol dehydrogenase YPDSF_RS07500 PF00005 ABC transporter YPDSF_RS07505 PF02653 YPDSF_RS07505 YPDSF_RS07510 PF16695 YPDSF_RS07510 YPDSF_RS07515 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS07520 PF01634 ATP phosphoribosyltransferase YPDSF_RS07520 PF08029 HisG, C-terminal domain YPDSF_RS07525 PF00815 Histidinol dehydrogenase YPDSF_RS07530 PF00155 Aminotransferase class I and II YPDSF_RS07535 PF00475 Imidazoleglycerol-phosphate dehydratase YPDSF_RS07535 PF13242 HAD-hyrolase-like YPDSF_RS07540 PF00117 Glutamine amidotransferase class-I YPDSF_RS07545 PF00977 Histidine biosynthesis protein YPDSF_RS07550 PF00977 Histidine biosynthesis protein YPDSF_RS07555 PF01502 Phosphoribosyl-AMP cyclohydrolase YPDSF_RS07555 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase YPDSF_RS07560 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YPDSF_RS07560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YPDSF_RS07565 PF00483 Nucleotidyl transferase YPDSF_RS07570 PF00483 Nucleotidyl transferase YPDSF_RS07575 PF04183 IucA / IucC family YPDSF_RS07575 PF06276 Ferric iron reductase FhuF-like transporter YPDSF_RS07580 PF00593 TonB dependent receptor YPDSF_RS07580 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS07585 PF01497 Periplasmic binding protein YPDSF_RS07590 PF01032 FecCD transport family YPDSF_RS07595 PF01032 FecCD transport family YPDSF_RS07600 PF00005 ABC transporter YPDSF_RS07605 PF04183 IucA / IucC family YPDSF_RS07605 PF06276 Ferric iron reductase FhuF-like transporter YPDSF_RS07610 PF13523 Acetyltransferase (GNAT) domain YPDSF_RS07615 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YPDSF_RS07620 PF00282 Pyridoxal-dependent decarboxylase conserved domain YPDSF_RS07625 PF06276 Ferric iron reductase FhuF-like transporter YPDSF_RS07625 PF11575 YPDSF_RS07625 YPDSF_RS07630 PF00571 CBS domain YPDSF_RS07630 PF03471 Transporter associated domain YPDSF_RS07630 PF03741 YPDSF_RS07630 YPDSF_RS07635 PF05170 YPDSF_RS07635 YPDSF_RS07635 PF13502 YPDSF_RS07635 YPDSF_RS07640 PF00692 dUTPase YPDSF_RS07645 PF00485 Phosphoribulokinase / Uridine kinase family YPDSF_RS07650 PF10609 ParA/MinD ATPase like YPDSF_RS07655 PF01588 Putative tRNA binding domain YPDSF_RS07655 PF09334 tRNA synthetases class I (M) YPDSF_RS07660 PF01797 Transposase IS200 like YPDSF_RS07675 PF13407 Periplasmic binding protein domain YPDSF_RS07680 PF08309 YPDSF_RS07680 YPDSF_RS07685 PF07690 Major Facilitator Superfamily YPDSF_RS07690 PF03788 YPDSF_RS07690 YPDSF_RS07695 PF04172 YPDSF_RS07695 YPDSF_RS07700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YPDSF_RS07700 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region YPDSF_RS07705 PF00390 Malic enzyme, N-terminal domain YPDSF_RS07705 PF03949 Malic enzyme, NAD binding domain YPDSF_RS07710 PF02698 DUF218 domain YPDSF_RS07715 PF02653 YPDSF_RS07715 YPDSF_RS07720 PF00665 Integrase core domain YPDSF_RS07720 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS07725 PF01695 IstB-like ATP binding protein YPDSF_RS07730 PF02653 YPDSF_RS07730 YPDSF_RS07735 PF00005 ABC transporter YPDSF_RS07740 PF13407 Periplasmic binding protein domain YPDSF_RS07745 PF04235 YPDSF_RS07745 YPDSF_RS07750 PF01227 GTP cyclohydrolase I YPDSF_RS07755 PF06779 YPDSF_RS07755 YPDSF_RS07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS07760 PF03466 LysR substrate binding domain YPDSF_RS07765 PF00107 Zinc-binding dehydrogenase YPDSF_RS07765 PF08240 Alcohol dehydrogenase GroES-like domain YPDSF_RS07770 PF00756 Putative esterase YPDSF_RS07785 PF13437 HlyD family secretion protein YPDSF_RS07790 PF00005 ABC transporter YPDSF_RS07795 PF04055 Radical SAM superfamily YPDSF_RS07800 PF00994 Probable molybdopterin binding domain YPDSF_RS07800 PF03453 MoeA N-terminal region (domain I and II) YPDSF_RS07800 PF03454 MoeA C-terminal region (domain IV) YPDSF_RS07805 PF00899 ThiF family YPDSF_RS07810 PF16809 YPDSF_RS07810 YPDSF_RS07815 PF00005 ABC transporter YPDSF_RS07815 PF12848 ABC transporter YPDSF_RS07820 PF16809 YPDSF_RS07820 YPDSF_RS07825 PF06812 YPDSF_RS07825 YPDSF_RS07825 PF12486 YPDSF_RS07825 YPDSF_RS07830 PF04965 Gene 25-like lysozyme YPDSF_RS07835 PF12790 Type VI secretion lipoprotein YPDSF_RS07840 PF06996 YPDSF_RS07840 YPDSF_RS07845 PF05947 YPDSF_RS07845 YPDSF_RS07855 PF05488 PAAR motif YPDSF_RS07855 PF15607 YPDSF_RS07855 YPDSF_RS07860 PF06812 YPDSF_RS07860 YPDSF_RS07860 PF16989 YPDSF_RS07860 YPDSF_RS07865 PF06744 YPDSF_RS07865 YPDSF_RS07865 PF06761 YPDSF_RS07865 YPDSF_RS07875 PF13592 YPDSF_RS07875 YPDSF_RS07885 PF01551 Peptidase family M23 YPDSF_RS07890 PF10106 YPDSF_RS07890 YPDSF_RS07900 PF01551 Peptidase family M23 YPDSF_RS07905 PF05954 Phage late control gene D protein (GPD) YPDSF_RS07905 PF10106 YPDSF_RS07905 YPDSF_RS07905 PF13296 YPDSF_RS07905 YPDSF_RS07910 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS07910 PF07724 AAA domain (Cdc48 subfamily) YPDSF_RS07910 PF10431 C-terminal, D2-small domain, of ClpB protein YPDSF_RS07915 PF05638 Protein of unknown function (DUF796) YPDSF_RS07920 PF00691 OmpA family YPDSF_RS07925 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) YPDSF_RS07930 PF05936 YPDSF_RS07930 YPDSF_RS07935 PF05943 YPDSF_RS07935 YPDSF_RS07940 PF05591 YPDSF_RS07940 YPDSF_RS07950 PF00698 Acyl transferase domain YPDSF_RS07955 PF00550 Phosphopantetheine attachment site YPDSF_RS07960 PF13924 YPDSF_RS07960 YPDSF_RS07965 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS07970 PF00378 Enoyl-CoA hydratase/isomerase family YPDSF_RS07975 PF00378 Enoyl-CoA hydratase/isomerase family YPDSF_RS07980 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal YPDSF_RS07980 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal YPDSF_RS07985 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS07990 PF00109 Beta-ketoacyl synthase, N-terminal domain YPDSF_RS07990 PF02801 Beta-ketoacyl synthase, C-terminal domain YPDSF_RS07995 PF07977 FabA-like domain YPDSF_RS08005 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS08010 PF01565 FAD binding domain YPDSF_RS08010 PF13480 Acetyltransferase (GNAT) domain YPDSF_RS08030 PF13610 YPDSF_RS08030 YPDSF_RS08040 PF04358 DsrC like protein YPDSF_RS08045 PF00708 Acylphosphatase YPDSF_RS08050 PF10672 S-adenosylmethionine-dependent methyltransferase YPDSF_RS08055 PF08755 Hemimethylated DNA-binding protein YccV like YPDSF_RS08060 PF13380 CoA binding domain YPDSF_RS08065 PF09829 YPDSF_RS08065 YPDSF_RS08070 PF02142 MGS-like domain YPDSF_RS08075 PF00580 UvrD/REP helicase N-terminal domain YPDSF_RS08075 PF12462 YPDSF_RS08075 YPDSF_RS08075 PF13361 UvrD-like helicase C-terminal domain YPDSF_RS08080 PF03733 YPDSF_RS08080 YPDSF_RS08085 PF12805 YPDSF_RS08085 YPDSF_RS08085 PF13515 YPDSF_RS08085 YPDSF_RS08090 PF04993 TfoX N-terminal domain YPDSF_RS08090 PF04994 TfoX C-terminal domain YPDSF_RS08095 PF03846 Cell division inhibitor SulA YPDSF_RS08100 PF00691 OmpA family YPDSF_RS08100 PF01389 OmpA-like transmembrane domain YPDSF_RS08110 PF01797 Transposase IS200 like YPDSF_RS08115 PF06303 Organiser of macrodomain of Terminus of chromosome YPDSF_RS08120 PF05362 Lon protease (S16) C-terminal proteolytic domain YPDSF_RS08120 PF13654 AAA domain YPDSF_RS08125 PF07977 FabA-like domain YPDSF_RS08135 PF00109 Beta-ketoacyl synthase, N-terminal domain YPDSF_RS08140 PF00665 Integrase core domain YPDSF_RS08140 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS08145 PF01695 IstB-like ATP binding protein YPDSF_RS08150 PF00109 Beta-ketoacyl synthase, N-terminal domain YPDSF_RS08150 PF02801 Beta-ketoacyl synthase, C-terminal domain YPDSF_RS08155 PF01797 Transposase IS200 like YPDSF_RS08165 PF01648 4'-phosphopantetheinyl transferase superfamily YPDSF_RS08170 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ YPDSF_RS08175 PF02565 Recombination protein O C terminal YPDSF_RS08175 PF11967 Recombination protein O N terminal YPDSF_RS08180 PF01926 50S ribosome-binding GTPase YPDSF_RS08180 PF07650 KH domain YPDSF_RS08185 PF00035 Double-stranded RNA binding motif YPDSF_RS08185 PF14622 Ribonuclease-III-like YPDSF_RS08190 PF00717 Peptidase S24-like YPDSF_RS08190 PF10502 Signal peptidase, peptidase S26 YPDSF_RS08195 PF00009 Elongation factor Tu GTP binding domain YPDSF_RS08195 PF00679 Elongation factor G C-terminus YPDSF_RS08195 PF03144 Elongation factor Tu domain 2 YPDSF_RS08195 PF06421 GTP-binding protein LepA C-terminus YPDSF_RS08205 PF04246 YPDSF_RS08205 YPDSF_RS08210 PF03888 MucB/RseB family YPDSF_RS08210 PF17188 YPDSF_RS08210 YPDSF_RS08215 PF03872 Anti sigma-E protein RseA, N-terminal domain YPDSF_RS08215 PF03873 Anti sigma-E protein RseA, C-terminal domain YPDSF_RS08220 PF04542 Sigma-70 region 2 YPDSF_RS08220 PF08281 Sigma-70, region 4 YPDSF_RS08225 PF00890 FAD binding domain YPDSF_RS08225 PF02910 Fumarate reductase flavoprotein C-term YPDSF_RS08230 PF05175 Methyltransferase small domain YPDSF_RS08235 PF00270 DEAD/DEAH box helicase YPDSF_RS08235 PF00271 Helicase conserved C-terminal domain YPDSF_RS08250 PF11187 Protein of unknown function (DUF2974) YPDSF_RS08255 PF01228 Glycine radical YPDSF_RS08260 PF03167 Uracil DNA glycosylase superfamily YPDSF_RS08265 PF01470 Pyroglutamyl peptidase YPDSF_RS08270 PF06166 YPDSF_RS08270 YPDSF_RS08275 PF06149 YPDSF_RS08275 YPDSF_RS08280 PF03746 LamB/YcsF family YPDSF_RS08285 PF02626 Allophanate hydrolase subunit 2 YPDSF_RS08295 PF01784 NIF3 (NGG1p interacting factor 3) YPDSF_RS08300 PF02112 YPDSF_RS08300 YPDSF_RS08305 PF00875 DNA photolyase YPDSF_RS08305 PF03441 FAD binding domain of DNA photolyase YPDSF_RS08310 PF08349 YPDSF_RS08310 YPDSF_RS08315 PF10725 YPDSF_RS08315 YPDSF_RS08325 PF09604 YPDSF_RS08325 YPDSF_RS08330 PF03814 YPDSF_RS08330 YPDSF_RS08335 PF00122 E1-E2 ATPase YPDSF_RS08335 PF00702 haloacid dehalogenase-like hydrolase YPDSF_RS08340 PF02669 YPDSF_RS08340 YPDSF_RS08350 PF00072 Response regulator receiver domain YPDSF_RS08350 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS08355 PF00892 EamA-like transporter family YPDSF_RS08370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YPDSF_RS08370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YPDSF_RS08370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YPDSF_RS08370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YPDSF_RS08375 PF03925 SeqA protein YPDSF_RS08390 PF04794 YdjC-like protein YPDSF_RS08395 PF07883 Cupin domain YPDSF_RS08395 PF12833 Helix-turn-helix domain YPDSF_RS08400 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit YPDSF_RS08405 PF02378 Phosphotransferase system, EIIC YPDSF_RS08410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPDSF_RS08420 PF02537 YPDSF_RS08420 YPDSF_RS08425 PF02537 YPDSF_RS08425 YPDSF_RS08430 PF02254 TrkA-N domain YPDSF_RS08430 PF07885 Ion channel YPDSF_RS08440 PF06411 HdeA/HdeB family YPDSF_RS08445 PF03824 YPDSF_RS08445 YPDSF_RS08450 PF03253 Urea transporter YPDSF_RS08455 PF01774 UreD urease accessory protein YPDSF_RS08460 PF02492 CobW/HypB/UreG, nucleotide-binding domain YPDSF_RS08465 PF01730 UreF YPDSF_RS08470 PF02814 UreE urease accessory protein, N-terminal domain YPDSF_RS08470 PF05194 UreE urease accessory protein, C-terminal domain YPDSF_RS08475 PF00449 Urease alpha-subunit, N-terminal domain YPDSF_RS08475 PF01979 Amidohydrolase family YPDSF_RS08480 PF00699 Urease beta subunit YPDSF_RS08485 PF00547 Urease, gamma subunit YPDSF_RS08490 PF00005 ABC transporter YPDSF_RS08495 PF00005 ABC transporter YPDSF_RS08500 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS08505 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS08510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPDSF_RS08515 PF00313 'Cold-shock' DNA-binding domain YPDSF_RS08520 PF04899 YPDSF_RS08520 YPDSF_RS08525 PF06711 YPDSF_RS08525 YPDSF_RS08530 PF09400 Protein of unknown function (DUF2002) YPDSF_RS08535 PF06392 YPDSF_RS08535 YPDSF_RS08540 PF00462 Glutaredoxin YPDSF_RS08545 PF07972 NrdI Flavodoxin like YPDSF_RS08550 PF00317 Ribonucleotide reductase, all-alpha domain YPDSF_RS08550 PF02867 Ribonucleotide reductase, barrel domain YPDSF_RS08550 PF08343 Ribonucleotide reductase N-terminal YPDSF_RS08555 PF00268 Ribonucleotide reductase, small chain YPDSF_RS08560 PF00005 ABC transporter YPDSF_RS08560 PF00571 CBS domain YPDSF_RS08565 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS08570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YPDSF_RS08575 PF01522 Polysaccharide deacetylase YPDSF_RS08585 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YPDSF_RS08595 PF00929 Exonuclease YPDSF_RS08600 PF00075 RNase H YPDSF_RS08605 PF08241 Methyltransferase domain YPDSF_RS08610 PF00753 Metallo-beta-lactamase superfamily YPDSF_RS08610 PF16123 YPDSF_RS08610 YPDSF_RS08615 PF01464 Transglycosylase SLT domain YPDSF_RS08615 PF01476 LysM domain YPDSF_RS08620 PF03372 Endonuclease/Exonuclease/phosphatase family YPDSF_RS08630 PF00248 Aldo/keto reductase family YPDSF_RS08665 PF13242 HAD-hyrolase-like YPDSF_RS08670 PF00005 ABC transporter YPDSF_RS08670 PF09383 NIL domain YPDSF_RS08675 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS08680 PF03180 NLPA lipoprotein YPDSF_RS08685 PF16358 YPDSF_RS08685 YPDSF_RS08690 PF01980 Uncharacterised protein family UPF0066 YPDSF_RS08695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YPDSF_RS08695 PF03129 Anticodon binding domain YPDSF_RS08695 PF04073 Aminoacyl-tRNA editing domain YPDSF_RS08700 PF04170 NlpE N-terminal domain YPDSF_RS08700 PF17185 YPDSF_RS08700 YPDSF_RS08705 PF00472 RF-1 domain YPDSF_RS08710 PF07152 YaeQ protein YPDSF_RS08715 PF06786 YPDSF_RS08715 YPDSF_RS08720 PF07073 Modulator of Rho-dependent transcription termination (ROF) YPDSF_RS08725 PF00034 Cytochrome c YPDSF_RS08730 PF01171 PP-loop family YPDSF_RS08730 PF09179 TilS substrate binding domain YPDSF_RS08730 PF11734 TilS substrate C-terminal domain YPDSF_RS08735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YPDSF_RS08740 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YPDSF_RS08745 PF01336 OB-fold nucleic acid binding domain YPDSF_RS08745 PF02811 PHP domain YPDSF_RS08745 PF07733 Bacterial DNA polymerase III alpha subunit YPDSF_RS08745 PF14579 Helix-hairpin-helix motif YPDSF_RS08750 PF01351 Ribonuclease HII YPDSF_RS08755 PF02684 YPDSF_RS08755 YPDSF_RS08760 PF00132 Bacterial transferase hexapeptide (six repeats) YPDSF_RS08760 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 YPDSF_RS08765 PF07977 FabA-like domain YPDSF_RS08770 PF00132 Bacterial transferase hexapeptide (six repeats) YPDSF_RS08770 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD YPDSF_RS08775 PF03938 Outer membrane protein (OmpH-like) YPDSF_RS08780 PF01103 Surface antigen YPDSF_RS08780 PF07244 Surface antigen variable number repeat YPDSF_RS08785 PF00595 PDZ domain (Also known as DHR or GLGF) YPDSF_RS08785 PF02163 Peptidase family M50 YPDSF_RS08790 PF01148 Cytidylyltransferase family YPDSF_RS08795 PF01255 Putative undecaprenyl diphosphate synthase YPDSF_RS08800 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase YPDSF_RS08800 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal YPDSF_RS08800 PF13288 DXP reductoisomerase C-terminal domain YPDSF_RS08805 PF01765 Ribosome recycling factor YPDSF_RS08810 PF00696 Amino acid kinase family YPDSF_RS08815 PF00889 Elongation factor TS YPDSF_RS08820 PF00318 Ribosomal protein S2 YPDSF_RS08825 PF00557 Metallopeptidase family M24 YPDSF_RS08830 PF01842 ACT domain YPDSF_RS08830 PF01909 Nucleotidyltransferase domain YPDSF_RS08830 PF01966 HD domain YPDSF_RS08830 PF08335 GlnD PII-uridylyltransferase YPDSF_RS08835 PF00132 Bacterial transferase hexapeptide (six repeats) YPDSF_RS08835 PF14602 Hexapeptide repeat of succinyl-transferase YPDSF_RS08835 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal YPDSF_RS08840 PF11944 YPDSF_RS08840 YPDSF_RS08845 PF00258 Flavodoxin YPDSF_RS08850 PF00849 RNA pseudouridylate synthase YPDSF_RS08855 PF04287 tRNA pseudouridine synthase C YPDSF_RS08860 PF01797 Transposase IS200 like YPDSF_RS08865 PF07348 Syd protein (SUKH-2) YPDSF_RS08870 PF14489 QueF-like protein YPDSF_RS08870 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term YPDSF_RS08875 PF03641 Possible lysine decarboxylase YPDSF_RS08875 PF11892 Domain of unknown function (DUF3412) YPDSF_RS08875 PF14793 Domain of unknown function (DUF4478) YPDSF_RS08880 PF01367 5'-3' exonuclease, C-terminal SAM fold YPDSF_RS08880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YPDSF_RS08885 PF01728 FtsJ-like methyltransferase YPDSF_RS08890 PF04241 YPDSF_RS08890 YPDSF_RS08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS08895 PF03466 LysR substrate binding domain YPDSF_RS08900 PF00266 Aminotransferase class-V YPDSF_RS08905 PF02657 Fe-S metabolism associated domain YPDSF_RS08910 PF00899 ThiF family YPDSF_RS08915 PF03562 MltA specific insert domain YPDSF_RS08915 PF06725 3D domain YPDSF_RS08935 PF01520 N-acetylmuramoyl-L-alanine amidase YPDSF_RS08935 PF11741 AMIN domain YPDSF_RS08945 PF00665 Integrase core domain YPDSF_RS08945 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS08950 PF01695 IstB-like ATP binding protein YPDSF_RS08955 PF00583 Acetyltransferase (GNAT) family YPDSF_RS08955 PF00696 Amino acid kinase family YPDSF_RS08960 PF13538 UvrD-like helicase C-terminal domain YPDSF_RS08960 PF13604 AAA domain YPDSF_RS08965 PF00580 UvrD/REP helicase N-terminal domain YPDSF_RS08965 PF13361 UvrD-like helicase C-terminal domain YPDSF_RS08970 PF00675 Insulinase (Peptidase family M16) YPDSF_RS08970 PF05193 Peptidase M16 inactive domain YPDSF_RS08970 PF16187 YPDSF_RS08970 YPDSF_RS08975 PF04257 Exodeoxyribonuclease V, gamma subunit YPDSF_RS08980 PF12528 YPDSF_RS08980 YPDSF_RS08985 PF10713 YPDSF_RS08985 YPDSF_RS09005 PF00303 Thymidylate synthase YPDSF_RS09010 PF01790 YPDSF_RS09010 YPDSF_RS09015 PF00391 PEP-utilising enzyme, mobile domain YPDSF_RS09015 PF01590 GAF domain YPDSF_RS09015 PF02896 PEP-utilising enzyme, TIM barrel domain YPDSF_RS09015 PF05524 PEP-utilising enzyme, N-terminal YPDSF_RS09020 PF00293 NUDIX domain YPDSF_RS09035 PF02976 DNA mismatch repair enzyme MutH YPDSF_RS09040 PF00248 Aldo/keto reductase family YPDSF_RS09055 PF07690 Major Facilitator Superfamily YPDSF_RS09060 PF00501 AMP-binding enzyme YPDSF_RS09060 PF01553 Acyltransferase YPDSF_RS09065 PF00384 Molybdopterin oxidoreductase YPDSF_RS09065 PF01568 Molydopterin dinucleotide binding domain YPDSF_RS09070 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS09070 PF13377 Periplasmic binding protein-like domain YPDSF_RS09075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YPDSF_RS09075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YPDSF_RS09080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS09080 PF03466 LysR substrate binding domain YPDSF_RS09085 PF07690 Major Facilitator Superfamily YPDSF_RS09090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS09090 PF03466 LysR substrate binding domain YPDSF_RS09095 PF00753 Metallo-beta-lactamase superfamily YPDSF_RS09100 PF01323 DSBA-like thioredoxin domain YPDSF_RS09105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPDSF_RS09105 PF00672 HAMP domain YPDSF_RS09105 PF02203 Tar ligand binding domain homologue YPDSF_RS09120 PF00872 YPDSF_RS09120 YPDSF_RS09125 PF07883 Cupin domain YPDSF_RS09130 PF04962 KduI/IolB family YPDSF_RS09135 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS09140 PF06917 Periplasmic pectate lyase YPDSF_RS09145 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS09150 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS09155 PF00005 ABC transporter YPDSF_RS09160 PF01547 Bacterial extracellular solute-binding protein YPDSF_RS09165 PF06178 Oligogalacturonate-specific porin protein (KdgM) YPDSF_RS09170 PF04307 YPDSF_RS09170 YPDSF_RS09175 PF00375 Sodium:dicarboxylate symporter family YPDSF_RS09180 PF01471 Putative peptidoglycan binding domain YPDSF_RS09180 PF01510 N-acetylmuramoyl-L-alanine amidase YPDSF_RS09185 PF01614 Bacterial transcriptional regulator YPDSF_RS09185 PF09339 IclR helix-turn-helix domain YPDSF_RS09190 PF14583 Oligogalacturonate lyase YPDSF_RS09195 PF07690 Major Facilitator Superfamily YPDSF_RS09200 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS09200 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS09205 PF00419 Fimbrial protein YPDSF_RS09210 PF00577 Outer membrane usher protein YPDSF_RS09210 PF13953 PapC C-terminal domain YPDSF_RS09210 PF13954 PapC N-terminal domain YPDSF_RS09215 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS09215 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS09220 PF16970 YPDSF_RS09220 YPDSF_RS09225 PF01435 Peptidase family M48 YPDSF_RS09230 PF00595 PDZ domain (Also known as DHR or GLGF) YPDSF_RS09230 PF03572 Peptidase family S41 YPDSF_RS09230 PF11818 YPDSF_RS09230 YPDSF_RS09235 PF04352 ProQ/FINO family YPDSF_RS09240 PF13185 GAF domain YPDSF_RS09245 PF04403 YPDSF_RS09245 YPDSF_RS09250 PF02470 YPDSF_RS09250 YPDSF_RS09255 PF05229 YPDSF_RS09255 YPDSF_RS09260 PF05229 YPDSF_RS09260 YPDSF_RS09265 PF05229 YPDSF_RS09265 YPDSF_RS09270 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS09275 PF00577 Outer membrane usher protein YPDSF_RS09275 PF13953 PapC C-terminal domain YPDSF_RS09280 PF05229 YPDSF_RS09280 YPDSF_RS09285 PF07351 YPDSF_RS09285 YPDSF_RS09290 PF04266 ASCH domain YPDSF_RS09295 PF00665 Integrase core domain YPDSF_RS09295 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS09300 PF01695 IstB-like ATP binding protein YPDSF_RS09310 PF01734 Patatin-like phospholipase YPDSF_RS09325 PF00842 Alanine racemase, C-terminal domain YPDSF_RS09325 PF01168 Alanine racemase, N-terminal domain YPDSF_RS09335 PF03895 YadA-like C-terminal region YPDSF_RS09335 PF05662 Coiled stalk of trimeric autotransporter adhesin YPDSF_RS09340 PF05658 Head domain of trimeric autotransporter adhesin YPDSF_RS09340 PF05662 Coiled stalk of trimeric autotransporter adhesin YPDSF_RS09345 PF01510 N-acetylmuramoyl-L-alanine amidase YPDSF_RS09355 PF04344 Chemotaxis phosphatase, CheZ YPDSF_RS09360 PF00072 Response regulator receiver domain YPDSF_RS09370 PF01739 CheR methyltransferase, SAM binding domain YPDSF_RS09370 PF03705 CheR methyltransferase, all-alpha domain YPDSF_RS09375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPDSF_RS09375 PF00672 HAMP domain YPDSF_RS09375 PF02203 Tar ligand binding domain homologue YPDSF_RS09380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPDSF_RS09380 PF00672 HAMP domain YPDSF_RS09380 PF02203 Tar ligand binding domain homologue YPDSF_RS09390 PF10101 YPDSF_RS09390 YPDSF_RS09395 PF03797 Autotransporter beta-domain YPDSF_RS09400 PF08348 YPDSF_RS09400 YPDSF_RS09400 PF13309 YPDSF_RS09400 YPDSF_RS09405 PF01261 Xylose isomerase-like TIM barrel YPDSF_RS09410 PF01042 Endoribonuclease L-PSP YPDSF_RS09415 PF07690 Major Facilitator Superfamily YPDSF_RS09420 PF01584 CheW-like domain YPDSF_RS09425 PF01584 CheW-like domain YPDSF_RS09425 PF01627 Hpt domain YPDSF_RS09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS09425 PF02895 Signal transducing histidine kinase, homodimeric domain YPDSF_RS09425 PF09078 CheY binding YPDSF_RS09430 PF00691 OmpA family YPDSF_RS09430 PF13677 YPDSF_RS09430 YPDSF_RS09435 PF01618 YPDSF_RS09435 YPDSF_RS09440 PF05280 Flagellar transcriptional activator (FlhC) YPDSF_RS09450 PF00122 E1-E2 ATPase YPDSF_RS09450 PF00689 Cation transporting ATPase, C-terminus YPDSF_RS09450 PF00690 Cation transporter/ATPase, N-terminus YPDSF_RS09450 PF00702 haloacid dehalogenase-like hydrolase YPDSF_RS09455 PF02308 YPDSF_RS09455 YPDSF_RS09470 PF10781 YPDSF_RS09470 YPDSF_RS09475 PF00313 'Cold-shock' DNA-binding domain YPDSF_RS09480 PF00703 Glycosyl hydrolases family 2 YPDSF_RS09480 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YPDSF_RS09480 PF02837 Glycosyl hydrolases family 2, sugar binding domain YPDSF_RS09480 PF02929 Beta galactosidase small chain YPDSF_RS09480 PF16353 YPDSF_RS09480 YPDSF_RS09485 PF00107 Zinc-binding dehydrogenase YPDSF_RS09485 PF08240 Alcohol dehydrogenase GroES-like domain YPDSF_RS09490 PF10777 YPDSF_RS09490 YPDSF_RS09495 PF01037 AsnC family YPDSF_RS09495 PF13412 Winged helix-turn-helix DNA-binding YPDSF_RS09500 PF11004 YPDSF_RS09500 YPDSF_RS09505 PF14001 YPDSF_RS09505 YPDSF_RS09510 PF00328 Histidine phosphatase superfamily (branch 2) YPDSF_RS09520 PF01638 HxlR-like helix-turn-helix YPDSF_RS09525 PF05368 NmrA-like family YPDSF_RS09530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPDSF_RS09530 PF00672 HAMP domain YPDSF_RS09530 PF08447 PAS fold YPDSF_RS09540 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS09540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPDSF_RS09545 PF00180 Isocitrate/isopropylmalate dehydrogenase YPDSF_RS09550 PF00849 RNA pseudouridylate synthase YPDSF_RS09555 PF00293 NUDIX domain YPDSF_RS09560 PF03054 tRNA methyl transferase YPDSF_RS09565 PF04356 Protein of unknown function (DUF489) YPDSF_RS09570 PF00206 Lyase YPDSF_RS09570 PF08328 Adenylosuccinate lyase C-terminal YPDSF_RS09575 PF13505 Outer membrane protein beta-barrel domain YPDSF_RS09580 PF00072 Response regulator receiver domain YPDSF_RS09580 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS09585 PF00672 HAMP domain YPDSF_RS09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS09585 PF08918 PhoQ Sensor YPDSF_RS09590 PF08007 Cupin superfamily protein YPDSF_RS09595 PF01546 Peptidase family M20/M25/M40 YPDSF_RS09595 PF07687 Peptidase dimerisation domain YPDSF_RS09600 PF02146 Sir2 family YPDSF_RS09605 PF00480 ROK family YPDSF_RS09610 PF02687 YPDSF_RS09610 YPDSF_RS09610 PF12704 MacB-like periplasmic core domain YPDSF_RS09615 PF00005 ABC transporter YPDSF_RS09620 PF02687 YPDSF_RS09620 YPDSF_RS09620 PF12704 MacB-like periplasmic core domain YPDSF_RS09625 PF00270 DEAD/DEAH box helicase YPDSF_RS09625 PF00271 Helicase conserved C-terminal domain YPDSF_RS09625 PF02559 CarD-like/TRCF domain YPDSF_RS09625 PF03461 TRCF domain YPDSF_RS09630 PF05433 YPDSF_RS09630 YPDSF_RS09635 PF00872 YPDSF_RS09635 YPDSF_RS09650 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS09655 PF05728 Uncharacterised protein family (UPF0227) YPDSF_RS09660 PF00933 Glycosyl hydrolase family 3 N terminal domain YPDSF_RS09665 PF01636 Phosphotransferase enzyme family YPDSF_RS09670 PF13036 Protein of unknown function (DUF3897) YPDSF_RS09675 PF07233 Protein of unknown function (DUF1425) YPDSF_RS09680 PF01230 HIT domain YPDSF_RS09685 PF08501 Shikimate dehydrogenase substrate binding domain YPDSF_RS09690 PF01797 Transposase IS200 like YPDSF_RS09695 PF00367 phosphotransferase system, EIIB YPDSF_RS09695 PF02378 Phosphotransferase system, EIIC YPDSF_RS09700 PF01026 TatD related DNase YPDSF_RS09705 PF09115 DNA polymerase III, delta subunit, C terminal YPDSF_RS09705 PF13177 DNA polymerase III, delta subunit YPDSF_RS09710 PF02223 Thymidylate kinase YPDSF_RS09715 PF02618 YceG-like family YPDSF_RS09720 PF01063 Aminotransferase class IV YPDSF_RS09725 PF01797 Transposase IS200 like YPDSF_RS09730 PF00109 Beta-ketoacyl synthase, N-terminal domain YPDSF_RS09730 PF02801 Beta-ketoacyl synthase, C-terminal domain YPDSF_RS09735 PF00550 Phosphopantetheine attachment site YPDSF_RS09740 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS09745 PF00698 Acyl transferase domain YPDSF_RS09750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YPDSF_RS09750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPDSF_RS09755 PF02504 Fatty acid synthesis protein YPDSF_RS09760 PF01783 Ribosomal L32p protein family YPDSF_RS09765 PF02620 YPDSF_RS09765 YPDSF_RS09770 PF02545 Maf-like protein YPDSF_RS09775 PF00849 RNA pseudouridylate synthase YPDSF_RS09775 PF01479 S4 domain YPDSF_RS09780 PF00575 S1 RNA binding domain YPDSF_RS09780 PF10150 Ribonuclease E/G family YPDSF_RS09780 PF12111 Polyribonucleotide phosphorylase C terminal YPDSF_RS09785 PF03992 Antibiotic biosynthesis monooxygenase YPDSF_RS09790 PF01979 Amidohydrolase family YPDSF_RS09795 PF06183 DinI-like family YPDSF_RS09805 PF13991 YPDSF_RS09805 YPDSF_RS09810 PF00872 YPDSF_RS09810 YPDSF_RS09815 PF01266 FAD dependent oxidoreductase YPDSF_RS09820 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS09825 PF01594 YPDSF_RS09825 YPDSF_RS09830 PF00581 Rhodanese-like domain YPDSF_RS09830 PF12368 YPDSF_RS09830 YPDSF_RS09850 PF00892 EamA-like transporter family YPDSF_RS09855 PF00765 Autoinducer synthetase YPDSF_RS09860 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS09860 PF03472 Autoinducer binding domain YPDSF_RS09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS09865 PF03466 LysR substrate binding domain YPDSF_RS09875 PF00083 Sugar (and other) transporter YPDSF_RS09880 PF08714 Formaldehyde-activating enzyme (Fae) YPDSF_RS09885 PF00248 Aldo/keto reductase family YPDSF_RS09890 PF09618 CRISPR-associated protein (Cas_Csy4) YPDSF_RS09895 PF09615 YPDSF_RS09895 YPDSF_RS09900 PF09614 YPDSF_RS09900 YPDSF_RS09905 PF09611 YPDSF_RS09905 YPDSF_RS09915 PF01867 CRISPR associated protein Cas1 YPDSF_RS09920 PF00924 Mechanosensitive ion channel YPDSF_RS09935 PF08950 Protein of unknown function (DUF1861) YPDSF_RS09940 PF04041 Domain of unknown function (DUF377) YPDSF_RS09945 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS09950 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS09955 PF13416 Bacterial extracellular solute-binding protein YPDSF_RS09960 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS09960 PF13377 Periplasmic binding protein-like domain YPDSF_RS09965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YPDSF_RS09965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YPDSF_RS09965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YPDSF_RS09965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YPDSF_RS09970 PF00005 ABC transporter YPDSF_RS09970 PF08402 TOBE domain YPDSF_RS09985 PF14106 YPDSF_RS09985 YPDSF_RS10000 PF04829 YPDSF_RS10000 YPDSF_RS10015 PF10004 YPDSF_RS10015 YPDSF_RS10020 PF04829 YPDSF_RS10020 YPDSF_RS10020 PF05594 YPDSF_RS10020 YPDSF_RS10020 PF05860 haemagglutination activity domain YPDSF_RS10020 PF13018 YPDSF_RS10020 YPDSF_RS10020 PF13332 YPDSF_RS10020 YPDSF_RS10025 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPDSF_RS10025 PF08479 POTRA domain, ShlB-type YPDSF_RS10030 PF00111 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS10030 PF00175 Oxidoreductase NAD-binding domain YPDSF_RS10030 PF00970 Oxidoreductase FAD-binding domain YPDSF_RS10035 PF00355 Rieske [2Fe-2S] domain YPDSF_RS10035 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YPDSF_RS10040 PF02028 BCCT family transporter YPDSF_RS10050 PF00180 Isocitrate/isopropylmalate dehydrogenase YPDSF_RS10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS10055 PF03466 LysR substrate binding domain YPDSF_RS10060 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS10060 PF13407 Periplasmic binding protein domain YPDSF_RS10065 PF02653 YPDSF_RS10065 YPDSF_RS10075 PF13407 Periplasmic binding protein domain YPDSF_RS10080 PF00107 Zinc-binding dehydrogenase YPDSF_RS10080 PF08240 Alcohol dehydrogenase GroES-like domain YPDSF_RS10085 PF16809 YPDSF_RS10085 YPDSF_RS10090 PF16809 YPDSF_RS10090 YPDSF_RS10095 PF01545 Cation efflux family YPDSF_RS10100 PF13505 Outer membrane protein beta-barrel domain YPDSF_RS10105 PF00892 EamA-like transporter family YPDSF_RS10110 PF13673 Acetyltransferase (GNAT) domain YPDSF_RS10115 PF13649 Methyltransferase domain YPDSF_RS10120 PF00210 Ferritin-like domain YPDSF_RS10125 PF02698 DUF218 domain YPDSF_RS10130 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS10135 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS10140 PF00005 ABC transporter YPDSF_RS10145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPDSF_RS10145 PF08448 PAS fold YPDSF_RS10145 PF13426 PAS domain YPDSF_RS10150 PF05971 Protein of unknown function (DUF890) YPDSF_RS10155 PF07338 Protein of unknown function (DUF1471) YPDSF_RS10160 PF00591 Glycosyl transferase family, a/b domain YPDSF_RS10160 PF02885 Glycosyl transferase family, helical bundle domain YPDSF_RS10165 PF00501 AMP-binding enzyme YPDSF_RS10170 PF13378 Enolase C-terminal domain-like YPDSF_RS10175 PF00378 Enoyl-CoA hydratase/isomerase family YPDSF_RS10180 PF12697 Alpha/beta hydrolase family YPDSF_RS10185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPDSF_RS10185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPDSF_RS10185 PF16582 YPDSF_RS10185 YPDSF_RS10190 PF00425 chorismate binding enzyme YPDSF_RS10200 PF05957 YPDSF_RS10200 YPDSF_RS10215 PF00920 Dehydratase family YPDSF_RS10220 PF03928 Domain of unknown function (DUF336) YPDSF_RS10225 PF07690 Major Facilitator Superfamily YPDSF_RS10230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPDSF_RS10230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPDSF_RS10240 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS10240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPDSF_RS10245 PF02638 YPDSF_RS10245 YPDSF_RS10250 PF00106 short chain dehydrogenase YPDSF_RS10255 PF01202 Shikimate kinase YPDSF_RS10260 PF04074 Domain of unknown function (DUF386) YPDSF_RS10270 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains YPDSF_RS10275 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains YPDSF_RS10280 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains YPDSF_RS10280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YPDSF_RS10285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YPDSF_RS10290 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YPDSF_RS10295 PF12838 4Fe-4S dicluster domain YPDSF_RS10300 PF00146 NADH dehydrogenase YPDSF_RS10305 PF00384 Molybdopterin oxidoreductase YPDSF_RS10305 PF01568 Molydopterin dinucleotide binding domain YPDSF_RS10305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPDSF_RS10305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YPDSF_RS10305 PF13510 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS10310 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YPDSF_RS10310 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YPDSF_RS10315 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin YPDSF_RS10320 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YPDSF_RS10320 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit YPDSF_RS10325 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YPDSF_RS10330 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YPDSF_RS10335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS10335 PF03466 LysR substrate binding domain YPDSF_RS10345 PF00155 Aminotransferase class I and II YPDSF_RS10350 PF13023 HD domain YPDSF_RS10360 PF02080 TrkA-C domain YPDSF_RS10360 PF03600 Citrate transporter YPDSF_RS10365 PF13419 Haloacid dehalogenase-like hydrolase YPDSF_RS10370 PF03887 YfbU domain YPDSF_RS10375 PF04217 YPDSF_RS10375 YPDSF_RS10385 PF00871 Acetokinase family YPDSF_RS10390 PF01515 Phosphate acetyl/butaryl transferase YPDSF_RS10390 PF07085 DRTGG domain YPDSF_RS10390 PF13500 AAA domain YPDSF_RS10395 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS10395 PF13377 Periplasmic binding protein-like domain YPDSF_RS10400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPDSF_RS10405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPDSF_RS10410 PF03611 YPDSF_RS10410 YPDSF_RS10415 PF00293 NUDIX domain YPDSF_RS10425 PF00563 EAL domain YPDSF_RS10430 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS10430 PF08338 Domain of unknown function (DUF1731) YPDSF_RS10435 PF00005 ABC transporter YPDSF_RS10440 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS10445 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS10450 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS10455 PF02441 Flavoprotein YPDSF_RS10460 PF00156 Phosphoribosyl transferase domain YPDSF_RS10460 PF13522 Glutamine amidotransferase domain YPDSF_RS10465 PF02674 YPDSF_RS10465 YPDSF_RS10470 PF05036 Sporulation related domain YPDSF_RS10475 PF02875 Mur ligase family, glutamate ligase domain YPDSF_RS10475 PF08245 Mur ligase middle domain YPDSF_RS10480 PF01039 Carboxyl transferase domain YPDSF_RS10485 PF09335 YPDSF_RS10485 YPDSF_RS10490 PF01416 tRNA pseudouridine synthase YPDSF_RS10495 PF01118 Semialdehyde dehydrogenase, NAD binding domain YPDSF_RS10495 PF02774 Semialdehyde dehydrogenase, dimerisation domain YPDSF_RS10500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPDSF_RS10500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPDSF_RS10500 PF11890 Domain of unknown function (DUF3410) YPDSF_RS10505 PF02311 AraC-like ligand binding domain YPDSF_RS10505 PF12833 Helix-turn-helix domain YPDSF_RS10515 PF00892 EamA-like transporter family YPDSF_RS10525 PF00419 Fimbrial protein YPDSF_RS10530 PF01177 Asp/Glu/Hydantoin racemase YPDSF_RS10535 PF00109 Beta-ketoacyl synthase, N-terminal domain YPDSF_RS10535 PF02801 Beta-ketoacyl synthase, C-terminal domain YPDSF_RS10540 PF01266 FAD dependent oxidoreductase YPDSF_RS10540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YPDSF_RS10545 PF08891 YPDSF_RS10545 YPDSF_RS10550 PF04315 YPDSF_RS10550 YPDSF_RS10555 PF01925 YPDSF_RS10555 YPDSF_RS10560 PF03411 Penicillin-insensitive murein endopeptidase YPDSF_RS10565 PF01264 Chorismate synthase YPDSF_RS10570 PF05175 Methyltransferase small domain YPDSF_RS10575 PF01713 Smr domain YPDSF_RS10580 PF00300 Histidine phosphatase superfamily (branch 1) YPDSF_RS10585 PF00378 Enoyl-CoA hydratase/isomerase family YPDSF_RS10585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YPDSF_RS10585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YPDSF_RS10590 PF00108 Thiolase, N-terminal domain YPDSF_RS10590 PF02803 Thiolase, C-terminal domain YPDSF_RS10595 PF04175 Protein of unknown function (DUF406) YPDSF_RS10600 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YPDSF_RS10605 PF04333 YPDSF_RS10605 YPDSF_RS10610 PF14559 Tetratricopeptide repeat YPDSF_RS10615 PF03918 Cytochrome C biogenesis protein YPDSF_RS10620 PF08534 Redoxin YPDSF_RS10625 PF01578 YPDSF_RS10625 YPDSF_RS10625 PF16327 YPDSF_RS10625 YPDSF_RS10630 PF03100 CcmE YPDSF_RS10635 PF04995 YPDSF_RS10635 YPDSF_RS10640 PF01578 YPDSF_RS10640 YPDSF_RS10645 PF03379 YPDSF_RS10645 YPDSF_RS10650 PF00005 ABC transporter YPDSF_RS10665 PF04011 LemA family YPDSF_RS10670 PF09972 YPDSF_RS10670 YPDSF_RS10675 PF03831 PhnA protein YPDSF_RS10675 PF08274 PhnA Zinc-Ribbon YPDSF_RS10685 PF04965 Gene 25-like lysozyme YPDSF_RS10690 PF07024 ImpE protein YPDSF_RS10700 PF05488 PAAR motif YPDSF_RS10705 PF05954 Phage late control gene D protein (GPD) YPDSF_RS10715 PF00691 OmpA family YPDSF_RS10715 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) YPDSF_RS10720 PF01695 IstB-like ATP binding protein YPDSF_RS10725 PF00665 Integrase core domain YPDSF_RS10725 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS10730 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) YPDSF_RS10735 PF05936 YPDSF_RS10735 YPDSF_RS10740 PF12790 Type VI secretion lipoprotein YPDSF_RS10745 PF05638 Protein of unknown function (DUF796) YPDSF_RS10750 PF05943 YPDSF_RS10750 YPDSF_RS10755 PF05591 YPDSF_RS10755 YPDSF_RS10760 PF00419 Fimbrial protein YPDSF_RS10765 PF00577 Outer membrane usher protein YPDSF_RS10765 PF13953 PapC C-terminal domain YPDSF_RS10770 PF00872 YPDSF_RS10770 YPDSF_RS10775 PF00577 Outer membrane usher protein YPDSF_RS10775 PF13954 PapC N-terminal domain YPDSF_RS10780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS10780 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS10785 PF16970 YPDSF_RS10785 YPDSF_RS10790 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS10790 PF02861 Clp amino terminal domain YPDSF_RS10790 PF07724 AAA domain (Cdc48 subfamily) YPDSF_RS10790 PF10431 C-terminal, D2-small domain, of ClpB protein YPDSF_RS10795 PF05947 YPDSF_RS10795 YPDSF_RS10805 PF06812 YPDSF_RS10805 YPDSF_RS10810 PF00419 Fimbrial protein YPDSF_RS10815 PF11397 YPDSF_RS10815 YPDSF_RS10825 PF00691 OmpA family YPDSF_RS10830 PF08786 Domain of unknown function (DUF1795) YPDSF_RS10835 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS10840 PF13406 Transglycosylase SLT domain YPDSF_RS10845 PF13343 Bacterial extracellular solute-binding protein YPDSF_RS10850 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS10855 PF00005 ABC transporter YPDSF_RS10860 PF09900 YPDSF_RS10860 YPDSF_RS10865 PF05638 Protein of unknown function (DUF796) YPDSF_RS10870 PF13988 YPDSF_RS10870 YPDSF_RS10875 PF00384 Molybdopterin oxidoreductase YPDSF_RS10875 PF01568 Molydopterin dinucleotide binding domain YPDSF_RS10875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPDSF_RS10880 PF13247 4Fe-4S dicluster domain YPDSF_RS10885 PF04976 YPDSF_RS10885 YPDSF_RS10890 PF02613 Nitrate reductase delta subunit YPDSF_RS10895 PF00037 4Fe-4S binding domain YPDSF_RS10895 PF12838 4Fe-4S dicluster domain YPDSF_RS10900 PF05643 Putative bacterial lipoprotein (DUF799) YPDSF_RS10905 PF16068 YPDSF_RS10905 YPDSF_RS10910 PF03783 Curli production assembly/transport component CsgG YPDSF_RS10915 PF15970 YPDSF_RS10915 YPDSF_RS10920 PF01292 Prokaryotic cytochrome b561 YPDSF_RS10925 PF00155 Aminotransferase class I and II YPDSF_RS10930 PF07350 Protein of unknown function (DUF1479) YPDSF_RS10935 PF02685 Glucokinase YPDSF_RS10940 PF05232 YPDSF_RS10940 YPDSF_RS10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS10945 PF03466 LysR substrate binding domain YPDSF_RS10950 PF00248 Aldo/keto reductase family YPDSF_RS10955 PF10697 YPDSF_RS10955 YPDSF_RS10960 PF01566 YPDSF_RS10960 YPDSF_RS10990 PF00749 tRNA synthetases class I (E and Q), catalytic domain YPDSF_RS11000 PF01797 Transposase IS200 like YPDSF_RS11005 PF06042 Bacterial protein of unknown function (DUF925) YPDSF_RS11010 PF14282 YPDSF_RS11010 YPDSF_RS11015 PF12843 YPDSF_RS11015 YPDSF_RS11020 PF00533 BRCA1 C Terminus (BRCT) domain YPDSF_RS11020 PF01653 NAD-dependent DNA ligase adenylation domain YPDSF_RS11020 PF03119 NAD-dependent DNA ligase C4 zinc finger domain YPDSF_RS11020 PF03120 NAD-dependent DNA ligase OB-fold domain YPDSF_RS11020 PF12826 Helix-hairpin-helix motif YPDSF_RS11020 PF14520 Helix-hairpin-helix domain YPDSF_RS11025 PF04354 ZipA, C-terminal FtsZ-binding domain YPDSF_RS11030 PF07264 Etoposide-induced protein 2 YPDSF_RS11035 PF00291 Pyridoxal-phosphate dependent enzyme YPDSF_RS11040 PF00381 PTS HPr component phosphorylation site YPDSF_RS11045 PF00391 PEP-utilising enzyme, mobile domain YPDSF_RS11045 PF02896 PEP-utilising enzyme, TIM barrel domain YPDSF_RS11045 PF05524 PEP-utilising enzyme, N-terminal YPDSF_RS11050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YPDSF_RS11055 PF01797 Transposase IS200 like YPDSF_RS11065 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS11065 PF00672 HAMP domain YPDSF_RS11065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS11070 PF00072 Response regulator receiver domain YPDSF_RS11070 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS11075 PF16576 YPDSF_RS11075 YPDSF_RS11080 PF00005 ABC transporter YPDSF_RS11080 PF02687 YPDSF_RS11080 YPDSF_RS11080 PF12704 MacB-like periplasmic core domain YPDSF_RS11085 PF00581 Rhodanese-like domain YPDSF_RS11085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPDSF_RS11085 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS11095 PF11755 YPDSF_RS11095 YPDSF_RS11100 PF00557 Metallopeptidase family M24 YPDSF_RS11100 PF01321 Creatinase/Prolidase N-terminal domain YPDSF_RS11105 PF01321 Creatinase/Prolidase N-terminal domain YPDSF_RS11110 PF00155 Aminotransferase class I and II YPDSF_RS11115 PF00092 von Willebrand factor type A domain YPDSF_RS11120 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS11120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS11125 PF00072 Response regulator receiver domain YPDSF_RS11125 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS11135 PF00291 Pyridoxal-phosphate dependent enzyme YPDSF_RS11140 PF00005 ABC transporter YPDSF_RS11145 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS11150 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS11155 PF13531 Bacterial extracellular solute-binding protein YPDSF_RS11160 PF07690 Major Facilitator Superfamily YPDSF_RS11165 PF01380 SIS domain YPDSF_RS11165 PF01418 Helix-turn-helix domain, rpiR family YPDSF_RS11175 PF04074 Domain of unknown function (DUF386) YPDSF_RS11180 PF00480 ROK family YPDSF_RS11185 PF12468 Type III secretion system leucine rich repeat protein YPDSF_RS11185 PF13855 Leucine rich repeat YPDSF_RS11190 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase YPDSF_RS11195 PF00701 Dihydrodipicolinate synthetase family YPDSF_RS11200 PF04261 Dyp-type peroxidase family YPDSF_RS11210 PF04076 Bacterial OB fold (BOF) protein YPDSF_RS11215 PF03212 Pertactin YPDSF_RS11215 PF03797 Autotransporter beta-domain YPDSF_RS11230 PF00583 Acetyltransferase (GNAT) family YPDSF_RS11235 PF01218 Coproporphyrinogen III oxidase YPDSF_RS11240 PF02639 YPDSF_RS11240 YPDSF_RS11245 PF00390 Malic enzyme, N-terminal domain YPDSF_RS11245 PF01515 Phosphate acetyl/butaryl transferase YPDSF_RS11245 PF03949 Malic enzyme, NAD binding domain YPDSF_RS11250 PF00293 NUDIX domain YPDSF_RS11255 PF03264 NapC/NirT cytochrome c family, N-terminal region YPDSF_RS11260 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) YPDSF_RS11265 PF00384 Molybdopterin oxidoreductase YPDSF_RS11265 PF01568 Molydopterin dinucleotide binding domain YPDSF_RS11265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPDSF_RS11265 PF10518 TAT (twin-arginine translocation) pathway signal sequence YPDSF_RS11270 PF03927 NapD protein YPDSF_RS11275 PF12838 4Fe-4S dicluster domain YPDSF_RS11275 PF13187 4Fe-4S dicluster domain YPDSF_RS11280 PF00072 Response regulator receiver domain YPDSF_RS11280 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS11285 PF09904 Winged helix-turn helix YPDSF_RS11290 PF00873 AcrB/AcrD/AcrF family YPDSF_RS11300 PF04307 YPDSF_RS11300 YPDSF_RS11305 PF04055 Radical SAM superfamily YPDSF_RS11305 PF13353 4Fe-4S single cluster domain YPDSF_RS11310 PF00884 Sulfatase YPDSF_RS11315 PF00005 ABC transporter YPDSF_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS11325 PF13416 Bacterial extracellular solute-binding protein YPDSF_RS11330 PF12688 Tetratrico peptide repeat YPDSF_RS11335 PF03960 ArsC family YPDSF_RS11340 PF01546 Peptidase family M20/M25/M40 YPDSF_RS11340 PF07687 Peptidase dimerisation domain YPDSF_RS11345 PF02557 D-alanyl-D-alanine carboxypeptidase YPDSF_RS11350 PF13980 YPDSF_RS11350 YPDSF_RS11355 PF05127 Helicase YPDSF_RS11355 PF08351 Domain of unknown function (DUF1726) YPDSF_RS11355 PF13718 GNAT acetyltransferase 2 YPDSF_RS11355 PF17176 YPDSF_RS11355 YPDSF_RS11360 PF04284 YPDSF_RS11360 YPDSF_RS11365 PF04228 YPDSF_RS11365 YPDSF_RS11370 PF01259 SAICAR synthetase YPDSF_RS11375 PF01797 Transposase IS200 like YPDSF_RS11385 PF06804 NlpB/DapX lipoprotein YPDSF_RS11390 PF00701 Dihydrodipicolinate synthetase family YPDSF_RS11395 PF13740 ACT domain YPDSF_RS11400 PF00578 AhpC/TSA family YPDSF_RS11420 PF01594 YPDSF_RS11420 YPDSF_RS11425 PF01435 Peptidase family M48 YPDSF_RS11425 PF07720 Tetratricopeptide repeat YPDSF_RS11425 PF14559 Tetratricopeptide repeat YPDSF_RS11430 PF03960 ArsC family YPDSF_RS11435 PF00308 Bacterial dnaA protein YPDSF_RS11440 PF01797 Transposase IS200 like YPDSF_RS11445 PF14681 Uracil phosphoribosyltransferase YPDSF_RS11450 PF00586 AIR synthase related protein, N-terminal domain YPDSF_RS11450 PF02769 AIR synthase related protein, C-terminal domain YPDSF_RS11455 PF00551 Formyl transferase YPDSF_RS11460 PF13302 Acetyltransferase (GNAT) domain YPDSF_RS11470 PF03692 YPDSF_RS11470 YPDSF_RS11475 PF00005 ABC transporter YPDSF_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS11490 PF02503 Polyphosphate kinase middle domain YPDSF_RS11490 PF13089 Polyphosphate kinase N-terminal domain YPDSF_RS11490 PF13090 Polyphosphate kinase C-terminal domain YPDSF_RS11495 PF02541 Ppx/GppA phosphatase family YPDSF_RS11500 PF11119 YPDSF_RS11500 YPDSF_RS11505 PF00571 CBS domain YPDSF_RS11505 PF01769 Divalent cation transporter YPDSF_RS11505 PF03448 MgtE intracellular N domain YPDSF_RS11510 PF00012 Hsp70 protein YPDSF_RS11515 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS11520 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS11525 PF13416 Bacterial extracellular solute-binding protein YPDSF_RS11530 PF00202 Aminotransferase class-III YPDSF_RS11535 PF00155 Aminotransferase class I and II YPDSF_RS11535 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS11540 PF00005 ABC transporter YPDSF_RS11540 PF08402 TOBE domain YPDSF_RS11545 PF13437 HlyD family secretion protein YPDSF_RS11545 PF13533 Biotin-lipoyl like YPDSF_RS11550 PF00873 AcrB/AcrD/AcrF family YPDSF_RS11560 PF07690 Major Facilitator Superfamily YPDSF_RS11565 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS11565 PF00672 HAMP domain YPDSF_RS11565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS11570 PF00072 Response regulator receiver domain YPDSF_RS11570 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS11575 PF07411 Domain of unknown function (DUF1508) YPDSF_RS11580 PF01136 YPDSF_RS11580 YPDSF_RS11580 PF16325 YPDSF_RS11580 YPDSF_RS11585 PF00781 Diacylglycerol kinase catalytic domain YPDSF_RS11590 PF08816 Inhibitor of vertebrate lysozyme (Ivy) YPDSF_RS11600 PF08543 Phosphomethylpyrimidine kinase YPDSF_RS11605 PF06092 YPDSF_RS11605 YPDSF_RS11615 PF00872 YPDSF_RS11615 YPDSF_RS11625 PF06836 YPDSF_RS11625 YPDSF_RS11630 PF06836 YPDSF_RS11630 YPDSF_RS11635 PF06836 YPDSF_RS11635 YPDSF_RS11640 PF06836 YPDSF_RS11640 YPDSF_RS11645 PF05638 Protein of unknown function (DUF796) YPDSF_RS11650 PF01797 Transposase IS200 like YPDSF_RS11660 PF00117 Glutamine amidotransferase class-I YPDSF_RS11660 PF00958 GMP synthase C terminal domain YPDSF_RS11660 PF02540 NAD synthase YPDSF_RS11670 PF00478 IMP dehydrogenase / GMP reductase domain YPDSF_RS11670 PF00571 CBS domain YPDSF_RS11675 PF02601 YPDSF_RS11675 YPDSF_RS11675 PF13742 YPDSF_RS11675 YPDSF_RS11680 PF07191 zinc-ribbons YPDSF_RS11685 PF03547 YPDSF_RS11685 YPDSF_RS11690 PF01926 50S ribosome-binding GTPase YPDSF_RS11690 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YPDSF_RS11695 PF13360 PQQ-like domain YPDSF_RS11700 PF09976 Tetratricopeptide repeat YPDSF_RS11705 PF03129 Anticodon binding domain YPDSF_RS11705 PF13393 Histidyl-tRNA synthetase YPDSF_RS11710 PF04551 GcpE protein YPDSF_RS11715 PF13413 Helix-turn-helix domain YPDSF_RS11715 PF13464 YPDSF_RS11715 YPDSF_RS11720 PF13181 Tetratricopeptide repeat YPDSF_RS11720 PF13431 Tetratricopeptide repeat YPDSF_RS11725 PF04055 Radical SAM superfamily YPDSF_RS11730 PF00334 Nucleoside diphosphate kinase YPDSF_RS11735 PF00030 Beta/Gamma crystallin YPDSF_RS11735 PF08964 Beta/Gamma crystallin YPDSF_RS11735 PF09101 Exotoxin A binding YPDSF_RS11745 PF03212 Pertactin YPDSF_RS11745 PF03797 Autotransporter beta-domain YPDSF_RS11750 PF03212 Pertactin YPDSF_RS11750 PF03797 Autotransporter beta-domain YPDSF_RS11755 PF03797 Autotransporter beta-domain YPDSF_RS11760 PF07179 YPDSF_RS11760 YPDSF_RS11760 PF14581 YPDSF_RS11760 YPDSF_RS11765 PF00883 Cytosol aminopeptidase family, catalytic domain YPDSF_RS11765 PF12404 YPDSF_RS11765 YPDSF_RS11770 PF04384 Iron-sulphur cluster assembly YPDSF_RS11775 PF00111 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS11780 PF00012 Hsp70 protein YPDSF_RS11785 PF00226 DnaJ domain YPDSF_RS11785 PF07743 HSCB C-terminal oligomerisation domain YPDSF_RS11790 PF01521 Iron-sulphur cluster biosynthesis YPDSF_RS11795 PF01592 NifU-like N terminal domain YPDSF_RS11800 PF00266 Aminotransferase class-V YPDSF_RS11805 PF02082 Transcriptional regulator YPDSF_RS11810 PF00588 SpoU rRNA Methylase family YPDSF_RS11815 PF00459 Inositol monophosphatase family YPDSF_RS11820 PF03824 YPDSF_RS11820 YPDSF_RS11825 PF06226 YPDSF_RS11825 YPDSF_RS11830 PF00874 PRD domain YPDSF_RS11835 PF12832 MFS_1 like family YPDSF_RS11840 PF13505 Outer membrane protein beta-barrel domain YPDSF_RS11850 PF00464 Serine hydroxymethyltransferase YPDSF_RS11855 PF00042 Globin YPDSF_RS11855 PF00175 Oxidoreductase NAD-binding domain YPDSF_RS11855 PF00970 Oxidoreductase FAD-binding domain YPDSF_RS11860 PF00665 Integrase core domain YPDSF_RS11860 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS11865 PF01695 IstB-like ATP binding protein YPDSF_RS11870 PF14502 Helix-turn-helix domain YPDSF_RS11870 PF14503 YhfZ C-terminal domain YPDSF_RS11875 PF00543 Nitrogen regulatory protein P-II YPDSF_RS11880 PF00795 Carbon-nitrogen hydrolase YPDSF_RS11880 PF02540 NAD synthase YPDSF_RS11885 PF00072 Response regulator receiver domain YPDSF_RS11885 PF00158 Sigma-54 interaction domain YPDSF_RS11890 PF13942 YPDSF_RS11890 YPDSF_RS11895 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS11895 PF00672 HAMP domain YPDSF_RS11895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS11900 PF01797 Transposase IS200 like YPDSF_RS11920 PF02769 AIR synthase related protein, C-terminal domain YPDSF_RS11920 PF13507 CobB/CobQ-like glutamine amidotransferase domain YPDSF_RS11925 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS11925 PF01464 Transglycosylase SLT domain YPDSF_RS11930 PF14437 YPDSF_RS11930 YPDSF_RS11935 PF12710 haloacid dehalogenase-like hydrolase YPDSF_RS11940 PF01380 SIS domain YPDSF_RS11945 PF01380 SIS domain YPDSF_RS11945 PF01418 Helix-turn-helix domain, rpiR family YPDSF_RS11950 PF12838 4Fe-4S dicluster domain YPDSF_RS11955 PF01797 Transposase IS200 like YPDSF_RS11965 PF04957 Ribosome modulation factor YPDSF_RS11975 PF03886 Protein of unknown function (DUF330) YPDSF_RS11980 PF02470 YPDSF_RS11980 YPDSF_RS11985 PF04403 YPDSF_RS11985 YPDSF_RS11990 PF00005 ABC transporter YPDSF_RS11990 PF12848 ABC transporter YPDSF_RS11990 PF16326 YPDSF_RS11990 YPDSF_RS11995 PF01170 Putative RNA methylase family UPF0020 YPDSF_RS11995 PF02926 THUMP domain YPDSF_RS11995 PF10672 S-adenosylmethionine-dependent methyltransferase YPDSF_RS12000 PF00111 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS12000 PF03473 MOSC domain YPDSF_RS12000 PF03476 MOSC N-terminal beta barrel domain YPDSF_RS12005 PF07126 YPDSF_RS12005 YPDSF_RS12010 PF01180 Dihydroorotate dehydrogenase YPDSF_RS12015 PF01433 Peptidase family M1 YPDSF_RS12015 PF11940 Domain of unknown function (DUF3458) YPDSF_RS12020 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family YPDSF_RS12025 PF00152 tRNA synthetases class II (D, K and N) YPDSF_RS12025 PF01336 OB-fold nucleic acid binding domain YPDSF_RS12030 PF00267 Gram-negative porin YPDSF_RS12035 PF00155 Aminotransferase class I and II YPDSF_RS12040 PF00753 Metallo-beta-lactamase superfamily YPDSF_RS12045 PF05951 YPDSF_RS12045 YPDSF_RS12050 PF01471 Putative peptidoglycan binding domain YPDSF_RS12050 PF03734 L,D-transpeptidase catalytic domain YPDSF_RS12055 PF01797 Transposase IS200 like YPDSF_RS12065 PF04310 MukB N-terminal YPDSF_RS12065 PF13558 Putative exonuclease SbcCD, C subunit YPDSF_RS12065 PF16330 YPDSF_RS12065 YPDSF_RS12070 PF04288 MukE-like family YPDSF_RS12075 PF03882 KicB killing factor YPDSF_RS12075 PF17192 YPDSF_RS12075 YPDSF_RS12075 PF17193 YPDSF_RS12075 YPDSF_RS12080 PF13847 Methyltransferase domain YPDSF_RS12090 PF03881 Fructosamine kinase YPDSF_RS12095 PF02348 Cytidylyltransferase YPDSF_RS12100 PF03966 Trm112p-like protein YPDSF_RS12105 PF00313 'Cold-shock' DNA-binding domain YPDSF_RS12115 PF07063 Domain of unknown function (DUF1338) YPDSF_RS12120 PF02606 Tetraacyldisaccharide-1-P 4'-kinase YPDSF_RS12125 PF00005 ABC transporter YPDSF_RS12125 PF00664 ABC transporter transmembrane region YPDSF_RS12130 PF00753 Metallo-beta-lactamase superfamily YPDSF_RS12130 PF03772 YPDSF_RS12130 YPDSF_RS12130 PF13567 YPDSF_RS12130 YPDSF_RS12140 PF00216 Bacterial DNA-binding protein YPDSF_RS12145 PF00575 S1 RNA binding domain YPDSF_RS12150 PF02224 Cytidylate kinase YPDSF_RS12155 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YPDSF_RS12160 PF00266 Aminotransferase class-V YPDSF_RS12165 PF03895 YadA-like C-terminal region YPDSF_RS12170 PF03895 YadA-like C-terminal region YPDSF_RS12170 PF05662 Coiled stalk of trimeric autotransporter adhesin YPDSF_RS12175 PF00710 Asparaginase YPDSF_RS12180 PF02624 YcaO-like family YPDSF_RS12185 PF01226 Formate/nitrite transporter YPDSF_RS12190 PF01228 Glycine radical YPDSF_RS12190 PF02901 Pyruvate formate lyase YPDSF_RS12195 PF01755 YPDSF_RS12195 YPDSF_RS12200 PF04055 Radical SAM superfamily YPDSF_RS12200 PF13353 4Fe-4S single cluster domain YPDSF_RS12205 PF07690 Major Facilitator Superfamily YPDSF_RS12210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YPDSF_RS12210 PF02403 Seryl-tRNA synthetase N-terminal domain YPDSF_RS12215 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS12215 PF12002 MgsA AAA+ ATPase C terminal YPDSF_RS12215 PF16193 YPDSF_RS12215 YPDSF_RS12220 PF03548 Outer membrane lipoprotein carrier protein LolA YPDSF_RS12225 PF01580 FtsK/SpoIIIE family YPDSF_RS12225 PF09397 Ftsk gamma domain YPDSF_RS12225 PF13491 YPDSF_RS12225 YPDSF_RS12230 PF01037 AsnC family YPDSF_RS12230 PF13412 Winged helix-turn-helix DNA-binding YPDSF_RS12235 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS12245 PF00005 ABC transporter YPDSF_RS12245 PF00664 ABC transporter transmembrane region YPDSF_RS12250 PF00005 ABC transporter YPDSF_RS12250 PF00664 ABC transporter transmembrane region YPDSF_RS12255 PF03588 Leucyl/phenylalanyl-tRNA protein transferase YPDSF_RS12260 PF01176 Translation initiation factor 1A / IF-1 YPDSF_RS12265 PF01797 Transposase IS200 like YPDSF_RS12270 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS12270 PF02861 Clp amino terminal domain YPDSF_RS12270 PF07724 AAA domain (Cdc48 subfamily) YPDSF_RS12270 PF10431 C-terminal, D2-small domain, of ClpB protein YPDSF_RS12275 PF02617 ATP-dependent Clp protease adaptor protein ClpS YPDSF_RS12280 PF00313 'Cold-shock' DNA-binding domain YPDSF_RS12285 PF00005 ABC transporter YPDSF_RS12285 PF02687 YPDSF_RS12285 YPDSF_RS12285 PF12704 MacB-like periplasmic core domain YPDSF_RS12290 PF16576 YPDSF_RS12290 YPDSF_RS12295 PF04393 YPDSF_RS12295 YPDSF_RS12300 PF11398 Protein of unknown function (DUF2813) YPDSF_RS12305 PF03956 YPDSF_RS12305 YPDSF_RS12310 PF03063 Prismane/CO dehydrogenase family YPDSF_RS12315 PF00111 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS12315 PF00175 Oxidoreductase NAD-binding domain YPDSF_RS12315 PF00970 Oxidoreductase FAD-binding domain YPDSF_RS12320 PF00205 Thiamine pyrophosphate enzyme, central domain YPDSF_RS12320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPDSF_RS12320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPDSF_RS12325 PF01212 Beta-eliminating lyase YPDSF_RS12330 PF11066 YPDSF_RS12330 YPDSF_RS12330 PF13460 NADH(P)-binding YPDSF_RS12335 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS12340 PF12883 Protein of unknown function (DUF3828) YPDSF_RS12345 PF01817 Chorismate mutase type II YPDSF_RS12350 PF00005 ABC transporter YPDSF_RS12355 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS12360 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS12365 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS12375 PF00892 EamA-like transporter family YPDSF_RS12380 PF10100 YPDSF_RS12380 YPDSF_RS12385 PF03059 Nicotianamine synthase protein YPDSF_RS12390 PF00005 ABC transporter YPDSF_RS12400 PF01497 Periplasmic binding protein YPDSF_RS12405 PF01145 SPFH domain / Band 7 family YPDSF_RS12420 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS12425 PF05958 tRNA (Uracil-5-)-methyltransferase YPDSF_RS12430 PF10767 YPDSF_RS12430 YPDSF_RS12435 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS12440 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS12445 PF00005 ABC transporter YPDSF_RS12445 PF08402 TOBE domain YPDSF_RS12450 PF13416 Bacterial extracellular solute-binding protein YPDSF_RS12455 PF10722 Putative bacterial sensory transduction regulator YPDSF_RS12465 PF07214 YPDSF_RS12465 YPDSF_RS12470 PF00462 Glutaredoxin YPDSF_RS12475 PF02080 TrkA-C domain YPDSF_RS12475 PF06826 YPDSF_RS12475 YPDSF_RS12480 PF01569 PAP2 superfamily YPDSF_RS12485 PF01569 PAP2 superfamily YPDSF_RS12490 PF01791 DeoC/LacD family aldolase YPDSF_RS12495 PF00455 YPDSF_RS12495 YPDSF_RS12495 PF08220 DeoR-like helix-turn-helix domain YPDSF_RS12500 PF03222 Tryptophan/tyrosine permease family YPDSF_RS12510 PF00768 D-alanyl-D-alanine carboxypeptidase YPDSF_RS12510 PF07943 Penicillin-binding protein 5, C-terminal domain YPDSF_RS12515 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS12520 PF00005 ABC transporter YPDSF_RS12520 PF09383 NIL domain YPDSF_RS12525 PF03180 NLPA lipoprotein YPDSF_RS12530 PF03171 2OG-Fe(II) oxygenase superfamily YPDSF_RS12530 PF14226 non-haem dioxygenase in morphine synthesis N-terminal YPDSF_RS12535 PF12710 haloacid dehalogenase-like hydrolase YPDSF_RS12540 PF00043 Glutathione S-transferase, C-terminal domain YPDSF_RS12540 PF13417 Glutathione S-transferase, N-terminal domain YPDSF_RS12545 PF00593 TonB dependent receptor YPDSF_RS12545 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS12550 PF00005 ABC transporter YPDSF_RS12555 PF01032 FecCD transport family YPDSF_RS12560 PF01497 Periplasmic binding protein YPDSF_RS12565 PF01797 Transposase IS200 like YPDSF_RS12570 PF00324 Amino acid permease YPDSF_RS12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS12575 PF03466 LysR substrate binding domain YPDSF_RS12580 PF03601 YPDSF_RS12580 YPDSF_RS12585 PF01261 Xylose isomerase-like TIM barrel YPDSF_RS12590 PF00577 Outer membrane usher protein YPDSF_RS12590 PF13953 PapC C-terminal domain YPDSF_RS12590 PF13954 PapC N-terminal domain YPDSF_RS12595 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS12595 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS12610 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS12615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPDSF_RS12615 PF02378 Phosphotransferase system, EIIC YPDSF_RS12620 PF00294 pfkB family carbohydrate kinase YPDSF_RS12625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPDSF_RS12625 PF00381 PTS HPr component phosphorylation site YPDSF_RS12630 PF00293 NUDIX domain YPDSF_RS12635 PF02653 YPDSF_RS12635 YPDSF_RS12640 PF00005 ABC transporter YPDSF_RS12645 PF13407 Periplasmic binding protein domain YPDSF_RS12650 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) YPDSF_RS12655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPDSF_RS12655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPDSF_RS12660 PF00171 Aldehyde dehydrogenase family YPDSF_RS12665 PF01557 Fumarylacetoacetate (FAA) hydrolase family YPDSF_RS12670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPDSF_RS12670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YPDSF_RS12675 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS12680 PF03692 YPDSF_RS12680 YPDSF_RS12685 PF03222 Tryptophan/tyrosine permease family YPDSF_RS12690 PF01132 Elongation factor P (EF-P) OB domain YPDSF_RS12690 PF08207 Elongation factor P (EF-P) KOW-like domain YPDSF_RS12690 PF09285 Elongation factor P, C-terminal YPDSF_RS12695 PF03786 D-mannonate dehydratase (UxuA) YPDSF_RS12700 PF01232 Mannitol dehydrogenase Rossmann domain YPDSF_RS12700 PF08125 Mannitol dehydrogenase C-terminal domain YPDSF_RS12715 PF02492 CobW/HypB/UreG, nucleotide-binding domain YPDSF_RS12715 PF07683 Cobalamin synthesis protein cobW C-terminal domain YPDSF_RS12720 PF01569 PAP2 superfamily YPDSF_RS12725 PF00877 NlpC/P60 family YPDSF_RS12730 PF00563 EAL domain YPDSF_RS12730 PF12792 YPDSF_RS12730 YPDSF_RS12735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPDSF_RS12740 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS12745 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS12745 PF12911 YPDSF_RS12745 YPDSF_RS12750 PF00005 ABC transporter YPDSF_RS12750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPDSF_RS12755 PF13989 YPDSF_RS12755 YPDSF_RS12760 PF07690 Major Facilitator Superfamily YPDSF_RS12765 PF00849 RNA pseudouridylate synthase YPDSF_RS12765 PF01479 S4 domain YPDSF_RS12770 PF00271 Helicase conserved C-terminal domain YPDSF_RS12770 PF04851 Type III restriction enzyme, res subunit YPDSF_RS12775 PF01386 Ribosomal L25p family YPDSF_RS12780 PF01797 Transposase IS200 like YPDSF_RS12785 PF04245 YPDSF_RS12785 YPDSF_RS12790 PF07208 Protein of unknown function (DUF1414) YPDSF_RS12795 PF00884 Sulfatase YPDSF_RS12795 PF11893 YPDSF_RS12795 YPDSF_RS12810 PF12639 DNase/tRNase domain of colicin-like bacteriocin YPDSF_RS12830 PF00232 Glycosyl hydrolase family 1 YPDSF_RS12835 PF01380 SIS domain YPDSF_RS12835 PF01418 Helix-turn-helix domain, rpiR family YPDSF_RS12840 PF07484 Phage Tail Collar Domain YPDSF_RS12845 PF10076 YPDSF_RS12845 YPDSF_RS12850 PF10076 YPDSF_RS12850 YPDSF_RS12855 PF04865 YPDSF_RS12855 YPDSF_RS12860 PF07409 YPDSF_RS12860 YPDSF_RS12870 PF05954 Phage late control gene D protein (GPD) YPDSF_RS12875 PF07157 YPDSF_RS12875 YPDSF_RS12885 PF10109 YPDSF_RS12885 YPDSF_RS12890 PF10618 YPDSF_RS12890 YPDSF_RS12895 PF04984 Phage tail sheath protein YPDSF_RS12900 PF10948 YPDSF_RS12900 YPDSF_RS12915 PF01261 Xylose isomerase-like TIM barrel YPDSF_RS12920 PF00455 YPDSF_RS12920 YPDSF_RS12920 PF08220 DeoR-like helix-turn-helix domain YPDSF_RS12925 PF00596 Class II Aldolase and Adducin N-terminal domain YPDSF_RS12930 PF07005 Protein of unknown function, DUF1537 YPDSF_RS12930 PF17042 YPDSF_RS12930 YPDSF_RS12935 PF06530 YPDSF_RS12935 YPDSF_RS12940 PF00717 Peptidase S24-like YPDSF_RS12940 PF01381 Helix-turn-helix YPDSF_RS12945 PF06183 DinI-like family YPDSF_RS12950 PF01278 Omptin family YPDSF_RS12955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YPDSF_RS12955 PF00672 HAMP domain YPDSF_RS12955 PF02743 Cache domain YPDSF_RS12960 PF12706 Beta-lactamase superfamily domain YPDSF_RS12965 PF13347 MFS/sugar transport protein YPDSF_RS12975 PF00144 Beta-lactamase YPDSF_RS12990 PF00267 Gram-negative porin YPDSF_RS13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS13010 PF01627 Hpt domain YPDSF_RS13010 PF16359 YPDSF_RS13010 YPDSF_RS13015 PF00072 Response regulator receiver domain YPDSF_RS13015 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS13020 PF00072 Response regulator receiver domain YPDSF_RS13020 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS13020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS13020 PF09456 RcsC Alpha-Beta-Loop (ABL) YPDSF_RS13030 PF00521 DNA gyrase/topoisomerase IV, subunit A YPDSF_RS13030 PF03989 DNA gyrase C-terminal domain, beta-propeller YPDSF_RS13035 PF13489 Methyltransferase domain YPDSF_RS13040 PF00317 Ribonucleotide reductase, all-alpha domain YPDSF_RS13040 PF02867 Ribonucleotide reductase, barrel domain YPDSF_RS13040 PF03477 ATP cone domain YPDSF_RS13045 PF00268 Ribonucleotide reductase, small chain YPDSF_RS13050 PF00111 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS13055 PF03974 Ecotin YPDSF_RS13060 PF00994 Probable molybdopterin binding domain YPDSF_RS13065 PF03222 Tryptophan/tyrosine permease family YPDSF_RS13070 PF07437 YPDSF_RS13070 YPDSF_RS13075 PF00199 Catalase YPDSF_RS13075 PF06628 Catalase-related immune-responsive YPDSF_RS13080 PF00270 DEAD/DEAH box helicase YPDSF_RS13080 PF06733 DEAD_2 YPDSF_RS13080 PF13307 Helicase C-terminal domain YPDSF_RS13085 PF00267 Gram-negative porin YPDSF_RS13090 PF00892 EamA-like transporter family YPDSF_RS13100 PF01276 Orn/Lys/Arg decarboxylase, major domain YPDSF_RS13100 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YPDSF_RS13105 PF00872 YPDSF_RS13105 YPDSF_RS13110 PF01276 Orn/Lys/Arg decarboxylase, major domain YPDSF_RS13110 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YPDSF_RS13115 PF13520 Amino acid permease YPDSF_RS13120 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS13125 PF00005 ABC transporter YPDSF_RS13130 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS13135 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YPDSF_RS13140 PF00581 Rhodanese-like domain YPDSF_RS13145 PF00282 Pyridoxal-dependent decarboxylase conserved domain YPDSF_RS13150 PF13640 2OG-Fe(II) oxygenase superfamily YPDSF_RS13155 PF00005 ABC transporter YPDSF_RS13160 PF00005 ABC transporter YPDSF_RS13160 PF12399 Branched-chain amino acid ATP-binding cassette transporter YPDSF_RS13165 PF02653 YPDSF_RS13165 YPDSF_RS13170 PF02653 YPDSF_RS13170 YPDSF_RS13170 PF13646 HEAT repeats YPDSF_RS13175 PF13433 Periplasmic binding protein domain YPDSF_RS13180 PF07308 YPDSF_RS13180 YPDSF_RS13185 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS13190 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS13195 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein YPDSF_RS13200 PF00005 ABC transporter YPDSF_RS13205 PF04226 YPDSF_RS13205 YPDSF_RS13210 PF05076 Suppressor of fused protein (SUFU) YPDSF_RS13215 PF01844 HNH endonuclease YPDSF_RS13220 PF01928 CYTH domain YPDSF_RS13225 PF01565 FAD binding domain YPDSF_RS13225 PF09330 D-lactate dehydrogenase, membrane binding YPDSF_RS13230 PF00768 D-alanyl-D-alanine carboxypeptidase YPDSF_RS13240 PF01207 Dihydrouridine synthase (Dus) YPDSF_RS13245 PF13349 YPDSF_RS13245 YPDSF_RS13250 PF01797 Transposase IS200 like YPDSF_RS13255 PF03825 YPDSF_RS13255 YPDSF_RS13260 PF01048 Phosphorylase superfamily YPDSF_RS13265 PF00892 EamA-like transporter family YPDSF_RS13270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS13270 PF03466 LysR substrate binding domain YPDSF_RS13275 PF02028 BCCT family transporter YPDSF_RS13280 PF00440 Bacterial regulatory proteins, tetR family YPDSF_RS13280 PF13977 Bacterial transcriptional repressor YPDSF_RS13285 PF00171 Aldehyde dehydrogenase family YPDSF_RS13290 PF00732 GMC oxidoreductase YPDSF_RS13290 PF05199 GMC oxidoreductase YPDSF_RS13295 PF01797 Transposase IS200 like YPDSF_RS13305 PF01027 Inhibitor of apoptosis-promoting Bax1 YPDSF_RS13310 PF02391 MoaE protein YPDSF_RS13315 PF02597 ThiS family YPDSF_RS13320 PF01967 MoaC family YPDSF_RS13325 PF04055 Radical SAM superfamily YPDSF_RS13325 PF06463 Molybdenum Cofactor Synthesis C YPDSF_RS13325 PF13353 4Fe-4S single cluster domain YPDSF_RS13335 PF01933 Uncharacterised protein family UPF0052 YPDSF_RS13340 PF09905 Uncharacterized conserved protein (DUF2132) YPDSF_RS13345 PF00271 Helicase conserved C-terminal domain YPDSF_RS13345 PF02151 UvrB/uvrC motif YPDSF_RS13345 PF04851 Type III restriction enzyme, res subunit YPDSF_RS13345 PF12344 Ultra-violet resistance protein B YPDSF_RS13350 PF00005 ABC transporter YPDSF_RS13355 PF13500 AAA domain YPDSF_RS13360 PF08241 Methyltransferase domain YPDSF_RS13365 PF00155 Aminotransferase class I and II YPDSF_RS13370 PF04055 Radical SAM superfamily YPDSF_RS13370 PF06968 Biotin and Thiamin Synthesis associated domain YPDSF_RS13375 PF00202 Aminotransferase class-III YPDSF_RS13380 PF10282 Lactonase, 7-bladed beta-propeller YPDSF_RS13385 PF08282 haloacid dehalogenase-like hydrolase YPDSF_RS13390 PF00005 ABC transporter YPDSF_RS13390 PF03459 TOBE domain YPDSF_RS13395 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS13400 PF13531 Bacterial extracellular solute-binding protein YPDSF_RS13405 PF10766 Protein of unknown function (DUF2592) YPDSF_RS13410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS13410 PF03459 TOBE domain YPDSF_RS13415 PF00005 ABC transporter YPDSF_RS13430 PF16363 YPDSF_RS13430 YPDSF_RS13435 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain YPDSF_RS13435 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain YPDSF_RS13440 PF00288 GHMP kinases N terminal domain YPDSF_RS13440 PF08544 GHMP kinases C terminal YPDSF_RS13440 PF10509 Galactokinase galactose-binding signature YPDSF_RS13450 PF01263 Aldose 1-epimerase YPDSF_RS13455 PF07769 YPDSF_RS13455 YPDSF_RS13460 PF00300 Histidine phosphatase superfamily (branch 1) YPDSF_RS13470 PF01545 Cation efflux family YPDSF_RS13475 PF04973 YPDSF_RS13475 YPDSF_RS13480 PF02445 Quinolinate synthetase A protein YPDSF_RS13505 PF13525 Outer membrane lipoprotein YPDSF_RS13505 PF16331 YPDSF_RS13505 YPDSF_RS13510 PF00691 OmpA family YPDSF_RS13515 PF04052 TolB amino-terminal domain YPDSF_RS13515 PF07676 WD40-like Beta Propeller Repeat YPDSF_RS13520 PF06519 TolA C-terminal YPDSF_RS13525 PF02472 Biopolymer transport protein ExbD/TolR YPDSF_RS13530 PF01618 YPDSF_RS13530 YPDSF_RS13535 PF03061 Thioesterase superfamily YPDSF_RS13540 PF09600 YPDSF_RS13540 YPDSF_RS13545 PF08173 YPDSF_RS13545 YPDSF_RS13550 PF02322 YPDSF_RS13550 YPDSF_RS13555 PF01654 YPDSF_RS13555 YPDSF_RS13560 PF01797 Transposase IS200 like YPDSF_RS13565 PF00549 CoA-ligase YPDSF_RS13565 PF02629 CoA binding domain YPDSF_RS13570 PF00549 CoA-ligase YPDSF_RS13570 PF08442 ATP-grasp domain YPDSF_RS13575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YPDSF_RS13575 PF00364 Biotin-requiring enzyme YPDSF_RS13575 PF02817 e3 binding domain YPDSF_RS13580 PF00676 Dehydrogenase E1 component YPDSF_RS13580 PF02779 Transketolase, pyrimidine binding domain YPDSF_RS13580 PF16078 YPDSF_RS13580 YPDSF_RS13580 PF16870 YPDSF_RS13580 YPDSF_RS13585 PF13085 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS13585 PF13534 4Fe-4S dicluster domain YPDSF_RS13590 PF00890 FAD binding domain YPDSF_RS13590 PF02910 Fumarate reductase flavoprotein C-term YPDSF_RS13600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YPDSF_RS13605 PF00285 Citrate synthase YPDSF_RS13610 PF01025 GrpE YPDSF_RS13615 PF01513 ATP-NAD kinase YPDSF_RS13620 PF02463 RecF/RecN/SMC N terminal domain YPDSF_RS13625 PF04355 SmpA / OmlA family YPDSF_RS13630 PF03658 RnfH family Ubiquitin YPDSF_RS13635 PF03364 Polyketide cyclase / dehydrase and lipid transport YPDSF_RS13640 PF01668 SmpB protein YPDSF_RS13650 PF01797 Transposase IS200 like YPDSF_RS13655 PF00589 Phage integrase family YPDSF_RS13655 PF13356 Domain of unknown function (DUF4102) YPDSF_RS13660 PF14130 YPDSF_RS13660 YPDSF_RS13685 PF12834 YPDSF_RS13685 YPDSF_RS13685 PF12835 Integrase YPDSF_RS13690 PF05930 Prophage CP4-57 regulatory protein (AlpA) YPDSF_RS13695 PF10554 YPDSF_RS13695 YPDSF_RS13700 PF08273 Zinc-binding domain of primase-helicase YPDSF_RS13700 PF13362 Toprim domain YPDSF_RS13705 PF13481 AAA domain YPDSF_RS13715 PF05973 YPDSF_RS13715 YPDSF_RS13725 PF00665 Integrase core domain YPDSF_RS13725 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS13730 PF01695 IstB-like ATP binding protein YPDSF_RS13735 PF13356 Domain of unknown function (DUF4102) YPDSF_RS13740 PF01527 Transposase YPDSF_RS13755 PF12697 Alpha/beta hydrolase family YPDSF_RS13765 PF01402 Ribbon-helix-helix protein, copG family YPDSF_RS13770 PF00258 Flavodoxin YPDSF_RS13775 PF01475 Ferric uptake regulator family YPDSF_RS13785 PF03573 outer membrane porin, OprD family YPDSF_RS13790 PF00749 tRNA synthetases class I (E and Q), catalytic domain YPDSF_RS13790 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain YPDSF_RS13795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YPDSF_RS13795 PF00367 phosphotransferase system, EIIB YPDSF_RS13795 PF02378 Phosphotransferase system, EIIC YPDSF_RS13800 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YPDSF_RS13805 PF01979 Amidohydrolase family YPDSF_RS13810 PF00480 ROK family YPDSF_RS13810 PF01047 MarR family YPDSF_RS13815 PF13242 HAD-hyrolase-like YPDSF_RS13815 PF13344 Haloacid dehalogenase-like hydrolase YPDSF_RS13820 PF00733 Asparagine synthase YPDSF_RS13820 PF13537 Glutamine amidotransferase domain YPDSF_RS13860 PF01494 FAD binding domain YPDSF_RS13865 PF00919 Uncharacterized protein family UPF0004 YPDSF_RS13865 PF01938 TRAM domain YPDSF_RS13865 PF04055 Radical SAM superfamily YPDSF_RS13870 PF02562 PhoH-like protein YPDSF_RS13875 PF02130 Uncharacterized protein family UPF0054 YPDSF_RS13880 PF00571 CBS domain YPDSF_RS13880 PF03471 Transporter associated domain YPDSF_RS13885 PF00795 Carbon-nitrogen hydrolase YPDSF_RS13890 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS13895 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS13900 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS13905 PF00005 ABC transporter YPDSF_RS13910 PF07295 YPDSF_RS13910 YPDSF_RS13915 PF00133 tRNA synthetases class I (I, L, M and V) YPDSF_RS13915 PF08264 Anticodon-binding domain of tRNA YPDSF_RS13915 PF13603 Leucyl-tRNA synthetase, Domain 2 YPDSF_RS13920 PF04390 Lipopolysaccharide-assembly YPDSF_RS13925 PF06144 DNA polymerase III, delta subunit YPDSF_RS13925 PF14840 Processivity clamp loader gamma complex DNA pol III C-term YPDSF_RS13930 PF01467 Cytidylyltransferase YPDSF_RS13935 PF02410 Oligomerisation domain YPDSF_RS13940 PF02590 Predicted SPOUT methyltransferase YPDSF_RS13945 PF00905 Penicillin binding protein transpeptidase domain YPDSF_RS13945 PF03717 Penicillin-binding Protein dimerisation domain YPDSF_RS13950 PF01098 YPDSF_RS13950 YPDSF_RS13955 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel YPDSF_RS13955 PF05036 Sporulation related domain YPDSF_RS13960 PF00768 D-alanyl-D-alanine carboxypeptidase YPDSF_RS13960 PF07943 Penicillin-binding protein 5, C-terminal domain YPDSF_RS13965 PF04359 Protein of unknown function (DUF493) YPDSF_RS13970 PF03099 Biotin/lipoate A/B protein ligase family YPDSF_RS13975 PF04055 Radical SAM superfamily YPDSF_RS13975 PF16881 YPDSF_RS13975 YPDSF_RS13980 PF02416 mttA/Hcf106 family YPDSF_RS13990 PF02537 YPDSF_RS13990 YPDSF_RS13995 PF00313 'Cold-shock' DNA-binding domain YPDSF_RS14000 PF00313 'Cold-shock' DNA-binding domain YPDSF_RS14005 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS14020 PF08971 Glycogen synthesis protein YPDSF_RS14025 PF03992 Antibiotic biosynthesis monooxygenase YPDSF_RS14030 PF00005 ABC transporter YPDSF_RS14030 PF00664 ABC transporter transmembrane region YPDSF_RS14040 PF04962 KduI/IolB family YPDSF_RS14045 PF01261 Xylose isomerase-like TIM barrel YPDSF_RS14050 PF00294 pfkB family carbohydrate kinase YPDSF_RS14050 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) YPDSF_RS14055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YPDSF_RS14055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YPDSF_RS14060 PF02653 YPDSF_RS14060 YPDSF_RS14065 PF00005 ABC transporter YPDSF_RS14070 PF13407 Periplasmic binding protein domain YPDSF_RS14085 PF00171 Aldehyde dehydrogenase family YPDSF_RS14090 PF01380 SIS domain YPDSF_RS14090 PF01418 Helix-turn-helix domain, rpiR family YPDSF_RS14095 PF07274 YPDSF_RS14095 YPDSF_RS14100 PF00207 Alpha-2-macroglobulin family YPDSF_RS14100 PF01835 MG2 domain YPDSF_RS14100 PF07703 Alpha-2-macroglobulin family N-terminal region YPDSF_RS14100 PF11974 Alpha-2-macroglobulin MG1 domain YPDSF_RS14105 PF00905 Penicillin binding protein transpeptidase domain YPDSF_RS14105 PF00912 Transglycosylase YPDSF_RS14105 PF06832 YPDSF_RS14105 YPDSF_RS14110 PF13693 Winged helix-turn-helix DNA-binding YPDSF_RS14125 PF06836 YPDSF_RS14125 YPDSF_RS14130 PF06836 YPDSF_RS14130 YPDSF_RS14135 PF05638 Protein of unknown function (DUF796) YPDSF_RS14150 PF03212 Pertactin YPDSF_RS14150 PF03797 Autotransporter beta-domain YPDSF_RS14165 PF00872 YPDSF_RS14165 YPDSF_RS14170 PF09925 YPDSF_RS14170 YPDSF_RS14170 PF14351 YPDSF_RS14170 YPDSF_RS14175 PF14345 YPDSF_RS14175 YPDSF_RS14180 PF00933 Glycosyl hydrolase family 3 N terminal domain YPDSF_RS14180 PF01915 Glycosyl hydrolase family 3 C-terminal domain YPDSF_RS14180 PF14310 Fibronectin type III-like domain YPDSF_RS14200 PF00248 Aldo/keto reductase family YPDSF_RS14205 PF00248 Aldo/keto reductase family YPDSF_RS14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS14210 PF03466 LysR substrate binding domain YPDSF_RS14215 PF00665 Integrase core domain YPDSF_RS14215 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS14220 PF01695 IstB-like ATP binding protein YPDSF_RS14235 PF00782 Dual specificity phosphatase, catalytic domain YPDSF_RS14235 PF14378 YPDSF_RS14235 YPDSF_RS14240 PF12146 Putative lysophospholipase YPDSF_RS14240 PF12147 YPDSF_RS14240 YPDSF_RS14245 PF01553 Acyltransferase YPDSF_RS14250 PF01148 Cytidylyltransferase family YPDSF_RS14255 PF01066 CDP-alcohol phosphatidyltransferase YPDSF_RS14285 PF05930 Prophage CP4-57 regulatory protein (AlpA) YPDSF_RS14295 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YPDSF_RS14295 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YPDSF_RS14300 PF13275 S4 domain YPDSF_RS14305 PF01797 Transposase IS200 like YPDSF_RS14315 PF01406 tRNA synthetases class I (C) catalytic domain YPDSF_RS14315 PF09190 DALR domain YPDSF_RS14320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YPDSF_RS14325 PF00149 Calcineurin-like phosphoesterase YPDSF_RS14330 PF00731 AIR carboxylase YPDSF_RS14335 PF02222 ATP-grasp domain YPDSF_RS14340 PF02687 YPDSF_RS14340 YPDSF_RS14345 PF00005 ABC transporter YPDSF_RS14350 PF13472 GDSL-like Lipase/Acylhydrolase family YPDSF_RS14355 PF00106 short chain dehydrogenase YPDSF_RS14360 PF00085 Thioredoxin YPDSF_RS14360 PF14559 Tetratricopeptide repeat YPDSF_RS14360 PF14561 Tetratricopeptide repeat YPDSF_RS14365 PF01145 SPFH domain / Band 7 family YPDSF_RS14370 PF01957 NfeD-like C-terminal, partner-binding YPDSF_RS14375 PF13411 MerR HTH family regulatory protein YPDSF_RS14380 PF00122 E1-E2 ATPase YPDSF_RS14380 PF00403 Heavy-metal-associated domain YPDSF_RS14380 PF00702 haloacid dehalogenase-like hydrolase YPDSF_RS14385 PF01963 YPDSF_RS14385 YPDSF_RS14390 PF04073 Aminoacyl-tRNA editing domain YPDSF_RS14405 PF02872 5'-nucleotidase, C-terminal domain YPDSF_RS14410 PF00149 Calcineurin-like phosphoesterase YPDSF_RS14425 PF00999 Sodium/hydrogen exchanger family YPDSF_RS14425 PF02254 TrkA-N domain YPDSF_RS14430 PF00294 pfkB family carbohydrate kinase YPDSF_RS14435 PF02706 Chain length determinant protein YPDSF_RS14440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YPDSF_RS14440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YPDSF_RS14440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YPDSF_RS14440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YPDSF_RS14445 PF00535 Glycosyl transferase family 2 YPDSF_RS14450 PF00483 Nucleotidyl transferase YPDSF_RS14450 PF01050 Mannose-6-phosphate isomerase YPDSF_RS14455 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS14465 PF00534 Glycosyl transferases group 1 YPDSF_RS14465 PF13439 Glycosyltransferase Family 4 YPDSF_RS14475 PF13692 Glycosyl transferases group 1 YPDSF_RS14480 PF00535 Glycosyl transferase family 2 YPDSF_RS14490 PF13450 NAD(P)-binding Rossmann-like domain YPDSF_RS14495 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS14500 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YPDSF_RS14505 PF16363 YPDSF_RS14505 YPDSF_RS14510 PF00483 Nucleotidyl transferase YPDSF_RS14515 PF00111 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS14515 PF00175 Oxidoreductase NAD-binding domain YPDSF_RS14515 PF00970 Oxidoreductase FAD-binding domain YPDSF_RS14520 PF00762 Ferrochelatase YPDSF_RS14525 PF00406 Adenylate kinase YPDSF_RS14525 PF05191 Adenylate kinase, active site lid YPDSF_RS14530 PF00183 Hsp90 protein YPDSF_RS14530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS14535 PF02132 RecR protein YPDSF_RS14535 PF13662 Toprim domain YPDSF_RS14540 PF02575 YbaB/EbfC DNA-binding family YPDSF_RS14545 PF12168 YPDSF_RS14545 YPDSF_RS14545 PF12169 DNA polymerase III subunits gamma and tau domain III YPDSF_RS14545 PF12170 DNA polymerase III tau subunit V interacting with alpha YPDSF_RS14545 PF13177 DNA polymerase III, delta subunit YPDSF_RS14550 PF00156 Phosphoribosyl transferase domain YPDSF_RS14560 PF07445 Primosomal replication protein priB and priC YPDSF_RS14565 PF10689 YPDSF_RS14565 YPDSF_RS14570 PF00924 Mechanosensitive ion channel YPDSF_RS14570 PF12794 YPDSF_RS14570 YPDSF_RS14570 PF12795 YPDSF_RS14570 YPDSF_RS14575 PF02635 DsrE/DsrF-like family YPDSF_RS14580 PF00440 Bacterial regulatory proteins, tetR family YPDSF_RS14580 PF08361 MAATS-type transcriptional repressor, C-terminal region YPDSF_RS14585 PF00529 HlyD family secretion protein YPDSF_RS14585 PF16576 YPDSF_RS14585 YPDSF_RS14590 PF00873 AcrB/AcrD/AcrF family YPDSF_RS14595 PF01197 Ribosomal protein L31 YPDSF_RS14600 PF00444 Ribosomal protein L36 YPDSF_RS14610 PF10757 YPDSF_RS14610 YPDSF_RS14615 PF05321 Haemolysin expression modulating protein YPDSF_RS14620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YPDSF_RS14625 PF09619 Type III secretion system lipoprotein chaperone (YscW) YPDSF_RS14630 PF13622 Thioesterase-like superfamily YPDSF_RS14635 PF00909 Ammonium Transporter Family YPDSF_RS14640 PF00543 Nitrogen regulatory protein P-II YPDSF_RS14645 PF00005 ABC transporter YPDSF_RS14645 PF00664 ABC transporter transmembrane region YPDSF_RS14650 PF00005 ABC transporter YPDSF_RS14650 PF00664 ABC transporter transmembrane region YPDSF_RS14655 PF01037 AsnC family YPDSF_RS14655 PF13412 Winged helix-turn-helix DNA-binding YPDSF_RS14660 PF00291 Pyridoxal-phosphate dependent enzyme YPDSF_RS14665 PF08282 haloacid dehalogenase-like hydrolase YPDSF_RS14670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPDSF_RS14670 PF12793 YPDSF_RS14670 YPDSF_RS14675 PF06508 Queuosine biosynthesis protein QueC YPDSF_RS14680 PF13279 Thioesterase-like superfamily YPDSF_RS14685 PF12836 Helix-hairpin-helix motif YPDSF_RS14690 PF13145 PPIC-type PPIASE domain YPDSF_RS14690 PF13624 SurA N-terminal domain YPDSF_RS14695 PF01797 Transposase IS200 like YPDSF_RS14705 PF00216 Bacterial DNA-binding protein YPDSF_RS14710 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS14710 PF02190 ATP-dependent protease La (LON) domain YPDSF_RS14710 PF05362 Lon protease (S16) C-terminal proteolytic domain YPDSF_RS14715 PF06689 ClpX C4-type zinc finger YPDSF_RS14715 PF07724 AAA domain (Cdc48 subfamily) YPDSF_RS14715 PF10431 C-terminal, D2-small domain, of ClpB protein YPDSF_RS14720 PF00574 Clp protease YPDSF_RS14725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPDSF_RS14725 PF05697 Bacterial trigger factor protein (TF) YPDSF_RS14725 PF05698 Bacterial trigger factor protein (TF) C-terminus YPDSF_RS14735 PF01722 BolA-like protein YPDSF_RS14740 PF03923 YPDSF_RS14740 YPDSF_RS14740 PF08139 YPDSF_RS14740 YPDSF_RS14745 PF07690 Major Facilitator Superfamily YPDSF_RS14750 PF03502 Nucleoside-specific channel-forming protein, Tsx YPDSF_RS14755 PF06481 COX Aromatic Rich Motif YPDSF_RS14760 PF00115 Cytochrome C and Quinol oxidase polypeptide I YPDSF_RS14765 PF00510 Cytochrome c oxidase subunit III YPDSF_RS14770 PF03626 YPDSF_RS14770 YPDSF_RS14775 PF01040 UbiA prenyltransferase family YPDSF_RS14780 PF07690 Major Facilitator Superfamily YPDSF_RS14785 PF04461 Protein of unknown function (DUF520) YPDSF_RS14790 PF02558 Ketopantoate reductase PanE/ApbA YPDSF_RS14790 PF08546 Ketopantoate reductase PanE/ApbA C terminal YPDSF_RS14795 PF01965 DJ-1/PfpI family YPDSF_RS14800 PF02568 Thiamine biosynthesis protein (ThiI) YPDSF_RS14800 PF02926 THUMP domain YPDSF_RS14810 PF02609 Exonuclease VII small subunit YPDSF_RS14815 PF00348 Polyprenyl synthetase YPDSF_RS14820 PF02779 Transketolase, pyrimidine binding domain YPDSF_RS14820 PF02780 Transketolase, C-terminal domain YPDSF_RS14820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase YPDSF_RS14825 PF01797 Transposase IS200 like YPDSF_RS14830 PF04608 Phosphatidylglycerophosphatase A YPDSF_RS14835 PF00586 AIR synthase related protein, N-terminal domain YPDSF_RS14835 PF02769 AIR synthase related protein, C-terminal domain YPDSF_RS14840 PF01029 NusB family YPDSF_RS14845 PF00885 6,7-dimethyl-8-ribityllumazine synthase YPDSF_RS14850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YPDSF_RS14850 PF01872 RibD C-terminal domain YPDSF_RS14855 PF03477 ATP cone domain YPDSF_RS14870 PF01797 Transposase IS200 like YPDSF_RS14875 PF02355 Protein export membrane protein YPDSF_RS14875 PF07549 SecD/SecF GG Motif YPDSF_RS14880 PF02355 Protein export membrane protein YPDSF_RS14880 PF07549 SecD/SecF GG Motif YPDSF_RS14880 PF13721 SecD export protein N-terminal TM region YPDSF_RS14885 PF02699 Preprotein translocase subunit YPDSF_RS14890 PF01702 Queuine tRNA-ribosyltransferase YPDSF_RS14895 PF02547 Queuosine biosynthesis protein YPDSF_RS14900 PF04336 YPDSF_RS14900 YPDSF_RS14905 PF00578 AhpC/TSA family YPDSF_RS14905 PF10417 C-terminal domain of 1-Cys peroxiredoxin YPDSF_RS14920 PF00106 short chain dehydrogenase YPDSF_RS14925 PF00128 Alpha amylase, catalytic domain YPDSF_RS14925 PF02903 Alpha amylase, N-terminal ig-like domain YPDSF_RS14930 PF00324 Amino acid permease YPDSF_RS14935 PF05525 YPDSF_RS14935 YPDSF_RS14940 PF12849 PBP superfamily domain YPDSF_RS14945 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS14945 PF00989 PAS fold YPDSF_RS14945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS14945 PF11808 YPDSF_RS14945 YPDSF_RS14950 PF00072 Response regulator receiver domain YPDSF_RS14950 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS14960 PF00149 Calcineurin-like phosphoesterase YPDSF_RS14960 PF12320 Type 5 capsule protein repressor C-terminal domain YPDSF_RS14965 PF13476 AAA domain YPDSF_RS14965 PF13558 Putative exonuclease SbcCD, C subunit YPDSF_RS14970 PF00480 ROK family YPDSF_RS14975 PF04381 Putative exonuclease, RdgC YPDSF_RS14980 PF06865 Protein of unknown function (DUF1255) YPDSF_RS14990 PF01202 Shikimate kinase YPDSF_RS14995 PF00398 Ribosomal RNA adenine dimethylase YPDSF_RS15005 PF08241 Methyltransferase domain YPDSF_RS15015 PF07238 PilZ domain YPDSF_RS15015 PF07317 Flagellar regulator YcgR YPDSF_RS15020 PF00171 Aldehyde dehydrogenase family YPDSF_RS15025 PF00696 Amino acid kinase family YPDSF_RS15025 PF01472 PUA domain YPDSF_RS15030 PF07417 Transcriptional regulator Crl YPDSF_RS15035 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) YPDSF_RS15040 PF00156 Phosphoribosyl transferase domain YPDSF_RS15045 PF16083 YPDSF_RS15045 YPDSF_RS15050 PF03067 Chitin binding domain YPDSF_RS15055 PF03466 LysR substrate binding domain YPDSF_RS15065 PF01546 Peptidase family M20/M25/M40 YPDSF_RS15065 PF07687 Peptidase dimerisation domain YPDSF_RS15070 PF00817 impB/mucB/samB family YPDSF_RS15070 PF11798 IMS family HHH motif YPDSF_RS15070 PF11799 impB/mucB/samB family C-terminal domain YPDSF_RS15075 PF03009 Glycerophosphoryl diester phosphodiesterase family YPDSF_RS15080 PF04400 YPDSF_RS15080 YPDSF_RS15085 PF02424 ApbE family YPDSF_RS15090 PF00111 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS15090 PF00175 Oxidoreductase NAD-binding domain YPDSF_RS15090 PF00970 Oxidoreductase FAD-binding domain YPDSF_RS15095 PF02508 YPDSF_RS15095 YPDSF_RS15100 PF02508 YPDSF_RS15100 YPDSF_RS15105 PF04205 FMN-binding domain YPDSF_RS15110 PF03116 YPDSF_RS15110 YPDSF_RS15115 PF05896 YPDSF_RS15115 YPDSF_RS15115 PF11973 YPDSF_RS15115 YPDSF_RS15120 PF03734 L,D-transpeptidase catalytic domain YPDSF_RS15125 PF13230 Glutamine amidotransferases class-II YPDSF_RS15130 PF13580 SIS domain YPDSF_RS15135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YPDSF_RS15135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YPDSF_RS15135 PF09317 YPDSF_RS15135 YPDSF_RS15140 PF01797 Transposase IS200 like YPDSF_RS15145 PF03333 Adhesin biosynthesis transcription regulatory protein YPDSF_RS15155 PF05860 haemagglutination activity domain YPDSF_RS15155 PF13018 YPDSF_RS15155 YPDSF_RS15160 PF08479 POTRA domain, ShlB-type YPDSF_RS15165 PF01636 Phosphotransferase enzyme family YPDSF_RS15170 PF01008 Initiation factor 2 subunit family YPDSF_RS15175 PF03079 ARD/ARD' family YPDSF_RS15185 PF00596 Class II Aldolase and Adducin N-terminal domain YPDSF_RS15190 PF00155 Aminotransferase class I and II YPDSF_RS15195 PF00795 Carbon-nitrogen hydrolase YPDSF_RS15200 PF01546 Peptidase family M20/M25/M40 YPDSF_RS15210 PF00665 Integrase core domain YPDSF_RS15210 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS15215 PF01695 IstB-like ATP binding protein YPDSF_RS15220 PF00266 Aminotransferase class-V YPDSF_RS15225 PF00005 ABC transporter YPDSF_RS15230 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS15235 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS15240 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS15250 PF01380 SIS domain YPDSF_RS15250 PF01418 Helix-turn-helix domain, rpiR family YPDSF_RS15255 PF13318 YPDSF_RS15255 YPDSF_RS15260 PF01425 Amidase YPDSF_RS15265 PF11533 Protein of unknown function (DUF3225) YPDSF_RS15270 PF07690 Major Facilitator Superfamily YPDSF_RS15275 PF03591 YPDSF_RS15275 YPDSF_RS15280 PF05437 YPDSF_RS15280 YPDSF_RS15285 PF01047 MarR family YPDSF_RS15290 PF00529 HlyD family secretion protein YPDSF_RS15290 PF16576 YPDSF_RS15290 YPDSF_RS15295 PF07690 Major Facilitator Superfamily YPDSF_RS15300 PF00588 SpoU rRNA Methylase family YPDSF_RS15300 PF08032 RNA 2'-O ribose methyltransferase substrate binding YPDSF_RS15305 PF00085 Thioredoxin YPDSF_RS15310 PF03942 YPDSF_RS15310 YPDSF_RS15315 PF00583 Acetyltransferase (GNAT) family YPDSF_RS15315 PF13380 CoA binding domain YPDSF_RS15315 PF13549 ATP-grasp domain YPDSF_RS15315 PF13607 Succinyl-CoA ligase like flavodoxin domain YPDSF_RS15320 PF13091 PLD-like domain YPDSF_RS15325 PF10043 YPDSF_RS15325 YPDSF_RS15360 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS15360 PF02861 Clp amino terminal domain YPDSF_RS15360 PF07724 AAA domain (Cdc48 subfamily) YPDSF_RS15360 PF10431 C-terminal, D2-small domain, of ClpB protein YPDSF_RS15365 PF02578 Multi-copper polyphenol oxidoreductase laccase YPDSF_RS15370 PF00849 RNA pseudouridylate synthase YPDSF_RS15370 PF01479 S4 domain YPDSF_RS15375 PF13525 Outer membrane lipoprotein YPDSF_RS15380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YPDSF_RS15385 PF01797 Transposase IS200 like YPDSF_RS15395 PF00800 Prephenate dehydratase YPDSF_RS15395 PF01817 Chorismate mutase type II YPDSF_RS15400 PF01817 Chorismate mutase type II YPDSF_RS15400 PF02153 Prephenate dehydrogenase YPDSF_RS15405 PF00793 DAHP synthetase I family YPDSF_RS15410 PF01695 IstB-like ATP binding protein YPDSF_RS15415 PF00665 Integrase core domain YPDSF_RS15415 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS15425 PF03884 Domain of unknown function (DUF329) YPDSF_RS15430 PF07072 Protein of unknown function (DUF1342) YPDSF_RS15435 PF01121 Dephospho-CoA kinase YPDSF_RS15445 PF00478 IMP dehydrogenase / GMP reductase domain YPDSF_RS15450 PF00482 Type II secretion system (T2SS), protein F YPDSF_RS15455 PF00437 Type II/IV secretion system protein YPDSF_RS15460 PF13633 Prokaryotic N-terminal methylation site YPDSF_RS15465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YPDSF_RS15465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain YPDSF_RS15470 PF01510 N-acetylmuramoyl-L-alanine amidase YPDSF_RS15475 PF17113 YPDSF_RS15475 YPDSF_RS15480 PF00324 Amino acid permease YPDSF_RS15485 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS15485 PF07729 FCD domain YPDSF_RS15490 PF00456 Transketolase, thiamine diphosphate binding domain YPDSF_RS15495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YPDSF_RS15495 PF00364 Biotin-requiring enzyme YPDSF_RS15495 PF02817 e3 binding domain YPDSF_RS15500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPDSF_RS15500 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS15510 PF01797 Transposase IS200 like YPDSF_RS15515 PF00330 Aconitase family (aconitate hydratase) YPDSF_RS15515 PF06434 Aconitate hydratase 2 N-terminus YPDSF_RS15515 PF11791 Aconitate B N-terminal domain YPDSF_RS15520 PF06062 YPDSF_RS15520 YPDSF_RS15525 PF00892 EamA-like transporter family YPDSF_RS15530 PF02675 S-adenosylmethionine decarboxylase YPDSF_RS15535 PF01564 Spermine/spermidine synthase YPDSF_RS15540 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) YPDSF_RS15545 PF00394 Multicopper oxidase YPDSF_RS15545 PF07731 Multicopper oxidase YPDSF_RS15545 PF07732 Multicopper oxidase YPDSF_RS15545 PF10518 TAT (twin-arginine translocation) pathway signal sequence YPDSF_RS15550 PF00156 Phosphoribosyl transferase domain YPDSF_RS15555 PF00484 Carbonic anhydrase YPDSF_RS15560 PF00005 ABC transporter YPDSF_RS15565 PF01061 YPDSF_RS15565 YPDSF_RS15575 PF02261 Aspartate decarboxylase YPDSF_RS15580 PF02569 Pantoate-beta-alanine ligase YPDSF_RS15585 PF02548 Ketopantoate hydroxymethyltransferase YPDSF_RS15590 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YPDSF_RS15595 PF01743 Poly A polymerase head domain YPDSF_RS15595 PF12626 Polymerase A arginine-rich C-terminus YPDSF_RS15595 PF12627 Probable RNA and SrmB- binding site of polymerase A YPDSF_RS15600 PF00749 tRNA synthetases class I (E and Q), catalytic domain YPDSF_RS15605 PF01258 Prokaryotic dksA/traR C4-type zinc finger YPDSF_RS15610 PF03749 Sugar fermentation stimulation protein YPDSF_RS15615 PF02834 LigT like Phosphoesterase YPDSF_RS15620 PF00270 DEAD/DEAH box helicase YPDSF_RS15620 PF00271 Helicase conserved C-terminal domain YPDSF_RS15620 PF04408 Helicase associated domain (HA2) YPDSF_RS15620 PF08482 YPDSF_RS15620 YPDSF_RS15625 PF00905 Penicillin binding protein transpeptidase domain YPDSF_RS15625 PF00912 Transglycosylase YPDSF_RS15625 PF14812 YPDSF_RS15625 YPDSF_RS15625 PF14814 Bifunctional transglycosylase second domain YPDSF_RS15635 PF01497 Periplasmic binding protein YPDSF_RS15640 PF01032 FecCD transport family YPDSF_RS15645 PF00202 Aminotransferase class-III YPDSF_RS15650 PF00654 Voltage gated chloride channel YPDSF_RS15655 PF01521 Iron-sulphur cluster biosynthesis YPDSF_RS15660 PF03458 YPDSF_RS15660 YPDSF_RS15665 PF01497 Periplasmic binding protein YPDSF_RS15670 PF01048 Phosphorylase superfamily YPDSF_RS15675 PF01966 HD domain YPDSF_RS15675 PF13286 Phosphohydrolase-associated domain YPDSF_RS15680 PF00595 PDZ domain (Also known as DHR or GLGF) YPDSF_RS15680 PF13180 PDZ domain YPDSF_RS15680 PF13365 Trypsin-like peptidase domain YPDSF_RS15685 PF00072 Response regulator receiver domain YPDSF_RS15685 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS15685 PF00672 HAMP domain YPDSF_RS15685 PF01627 Hpt domain YPDSF_RS15685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS15685 PF09984 YPDSF_RS15685 YPDSF_RS15690 PF02824 TGS domain YPDSF_RS15690 PF04607 Region found in RelA / SpoT proteins YPDSF_RS15690 PF13291 ACT domain YPDSF_RS15690 PF13328 HD domain YPDSF_RS15700 PF03819 MazG nucleotide pyrophosphohydrolase domain YPDSF_RS15705 PF00117 Glutamine amidotransferase class-I YPDSF_RS15705 PF06418 CTP synthase N-terminus YPDSF_RS15710 PF00113 Enolase, C-terminal TIM barrel domain YPDSF_RS15710 PF03952 Enolase, N-terminal domain YPDSF_RS15715 PF00080 Copper/zinc superoxide dismutase (SODC) YPDSF_RS15720 PF04055 Radical SAM superfamily YPDSF_RS15720 PF13394 4Fe-4S single cluster domain YPDSF_RS15725 PF01242 6-pyruvoyl tetrahydropterin synthase YPDSF_RS15730 PF00175 Oxidoreductase NAD-binding domain YPDSF_RS15730 PF00258 Flavodoxin YPDSF_RS15730 PF00667 FAD binding domain YPDSF_RS15735 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YPDSF_RS15735 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YPDSF_RS15745 PF15919 YPDSF_RS15745 YPDSF_RS15750 PF07927 YcfA-like protein YPDSF_RS15760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YPDSF_RS15760 PF10414 Sirohaem synthase dimerisation region YPDSF_RS15760 PF13241 Putative NAD(P)-binding YPDSF_RS15760 PF14824 Sirohaem biosynthesis protein central YPDSF_RS15765 PF01507 Phosphoadenosine phosphosulfate reductase family YPDSF_RS15770 PF00009 Elongation factor Tu GTP binding domain YPDSF_RS15775 PF01583 Adenylylsulphate kinase YPDSF_RS15780 PF12084 YPDSF_RS15780 YPDSF_RS15785 PF04977 Septum formation initiator YPDSF_RS15790 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YPDSF_RS15795 PF02542 YgbB family YPDSF_RS15800 PF01142 tRNA pseudouridine synthase D (TruD) YPDSF_RS15805 PF01975 Survival protein SurE YPDSF_RS15810 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) YPDSF_RS15815 PF01476 LysM domain YPDSF_RS15815 PF01551 Peptidase family M23 YPDSF_RS15820 PF00140 Sigma-70 factor, region 1 YPDSF_RS15820 PF04539 Sigma-70 region 3 YPDSF_RS15820 PF04542 Sigma-70 region 2 YPDSF_RS15820 PF04545 Sigma-70, region 4 YPDSF_RS15825 PF00488 MutS domain V YPDSF_RS15825 PF01624 MutS domain I YPDSF_RS15825 PF05188 MutS domain II YPDSF_RS15825 PF05190 MutS family domain IV YPDSF_RS15825 PF05192 MutS domain III YPDSF_RS15835 PF02502 Ribose/Galactose Isomerase YPDSF_RS15840 PF00107 Zinc-binding dehydrogenase YPDSF_RS15840 PF08240 Alcohol dehydrogenase GroES-like domain YPDSF_RS15845 PF13561 Enoyl-(Acyl carrier protein) reductase YPDSF_RS15850 PF02733 Dak1 domain YPDSF_RS15855 PF02734 DAK2 domain YPDSF_RS15860 PF04198 Putative sugar-binding domain YPDSF_RS15860 PF13518 Helix-turn-helix domain YPDSF_RS15865 PF02040 YPDSF_RS15865 YPDSF_RS15870 PF01022 Bacterial regulatory protein, arsR family YPDSF_RS15875 PF04703 FaeA-like protein YPDSF_RS15885 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS15890 PF00034 Cytochrome c YPDSF_RS15890 PF03150 Di-haem cytochrome c peroxidase YPDSF_RS15890 PF14376 YPDSF_RS15890 YPDSF_RS15900 PF00593 TonB dependent receptor YPDSF_RS15900 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS15905 PF07906 YPDSF_RS15905 YPDSF_RS15920 PF11903 YPDSF_RS15920 YPDSF_RS15925 PF05681 YPDSF_RS15925 YPDSF_RS15925 PF05683 Fumarase C-terminus YPDSF_RS15930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPDSF_RS15930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPDSF_RS15935 PF01261 Xylose isomerase-like TIM barrel YPDSF_RS15940 PF02653 YPDSF_RS15940 YPDSF_RS15945 PF02653 YPDSF_RS15945 YPDSF_RS15950 PF00005 ABC transporter YPDSF_RS15955 PF13407 Periplasmic binding protein domain YPDSF_RS15960 PF00455 YPDSF_RS15960 YPDSF_RS15960 PF08220 DeoR-like helix-turn-helix domain YPDSF_RS15965 PF00596 Class II Aldolase and Adducin N-terminal domain YPDSF_RS15970 PF00384 Molybdopterin oxidoreductase YPDSF_RS15970 PF01568 Molydopterin dinucleotide binding domain YPDSF_RS15970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPDSF_RS15975 PF12800 4Fe-4S binding domain YPDSF_RS15975 PF13247 4Fe-4S dicluster domain YPDSF_RS15980 PF04976 YPDSF_RS15980 YPDSF_RS15985 PF02613 Nitrate reductase delta subunit YPDSF_RS15990 PF01292 Prokaryotic cytochrome b561 YPDSF_RS15995 PF07361 Cytochrome b562 YPDSF_RS16000 PF00141 Peroxidase YPDSF_RS16005 PF13407 Periplasmic binding protein domain YPDSF_RS16010 PF10054 Predicted periplasmic lipoprotein (DUF2291) YPDSF_RS16015 PF00005 ABC transporter YPDSF_RS16020 PF02653 YPDSF_RS16020 YPDSF_RS16025 PF00456 Transketolase, thiamine diphosphate binding domain YPDSF_RS16030 PF02779 Transketolase, pyrimidine binding domain YPDSF_RS16030 PF02780 Transketolase, C-terminal domain YPDSF_RS16035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPDSF_RS16035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPDSF_RS16040 PF02952 L-fucose isomerase, C-terminal domain YPDSF_RS16045 PF01047 MarR family YPDSF_RS16045 PF04198 Putative sugar-binding domain YPDSF_RS16050 PF07690 Major Facilitator Superfamily YPDSF_RS16055 PF02464 Competence-damaged protein YPDSF_RS16060 PF00154 recA bacterial DNA recombination protein YPDSF_RS16065 PF02631 RecX family YPDSF_RS16070 PF01411 tRNA synthetases class II (A) YPDSF_RS16070 PF02272 DHHA1 domain YPDSF_RS16070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YPDSF_RS16075 PF02599 Global regulator protein family YPDSF_RS16095 PF13419 Haloacid dehalogenase-like hydrolase YPDSF_RS16105 PF04262 Glutamate-cysteine ligase YPDSF_RS16110 PF02664 S-Ribosylhomocysteinase (LuxS) YPDSF_RS16115 PF00571 CBS domain YPDSF_RS16115 PF01595 YPDSF_RS16115 YPDSF_RS16115 PF03471 Transporter associated domain YPDSF_RS16120 PF01578 YPDSF_RS16120 YPDSF_RS16125 PF00448 SRP54-type protein, GTPase domain YPDSF_RS16125 PF02881 SRP54-type protein, helical bundle domain YPDSF_RS16125 PF02978 Signal peptide binding domain YPDSF_RS16130 PF00886 Ribosomal protein S16 YPDSF_RS16135 PF01782 RimM N-terminal domain YPDSF_RS16135 PF05239 PRC-barrel domain YPDSF_RS16140 PF01746 tRNA (Guanine-1)-methyltransferase YPDSF_RS16145 PF01245 Ribosomal protein L19 YPDSF_RS16150 PF04338 Protein of unknown function, DUF481 YPDSF_RS16160 PF00072 Response regulator receiver domain YPDSF_RS16160 PF04397 LytTr DNA-binding domain YPDSF_RS16165 PF00793 DAHP synthetase I family YPDSF_RS16170 PF00665 Integrase core domain YPDSF_RS16170 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS16175 PF01695 IstB-like ATP binding protein YPDSF_RS16180 PF00293 NUDIX domain YPDSF_RS16185 PF01043 SecA preprotein cross-linking domain YPDSF_RS16185 PF02810 SEC-C motif YPDSF_RS16185 PF07516 SecA Wing and Scaffold domain YPDSF_RS16185 PF07517 SecA DEAD-like domain YPDSF_RS16190 PF06558 YPDSF_RS16190 YPDSF_RS16195 PF05258 YPDSF_RS16195 YPDSF_RS16200 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase YPDSF_RS16205 PF00091 Tubulin/FtsZ family, GTPase domain YPDSF_RS16205 PF12327 FtsZ family, C-terminal domain YPDSF_RS16210 PF02491 SHS2 domain inserted in FTSA YPDSF_RS16210 PF14450 Cell division protein FtsA YPDSF_RS16215 PF03799 Cell division protein FtsQ YPDSF_RS16215 PF08478 POTRA domain, FtsQ-type YPDSF_RS16220 PF01820 D-ala D-ala ligase N-terminus YPDSF_RS16220 PF07478 D-ala D-ala ligase C-terminus YPDSF_RS16225 PF01225 Mur ligase family, catalytic domain YPDSF_RS16225 PF02875 Mur ligase family, glutamate ligase domain YPDSF_RS16225 PF08245 Mur ligase middle domain YPDSF_RS16230 PF03033 Glycosyltransferase family 28 N-terminal domain YPDSF_RS16230 PF04101 Glycosyltransferase family 28 C-terminal domain YPDSF_RS16235 PF01098 YPDSF_RS16235 YPDSF_RS16240 PF02875 Mur ligase family, glutamate ligase domain YPDSF_RS16240 PF08245 Mur ligase middle domain YPDSF_RS16245 PF00953 Glycosyl transferase family 4 YPDSF_RS16245 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 YPDSF_RS16250 PF01225 Mur ligase family, catalytic domain YPDSF_RS16250 PF02875 Mur ligase family, glutamate ligase domain YPDSF_RS16250 PF08245 Mur ligase middle domain YPDSF_RS16255 PF01225 Mur ligase family, catalytic domain YPDSF_RS16255 PF02875 Mur ligase family, glutamate ligase domain YPDSF_RS16255 PF08245 Mur ligase middle domain YPDSF_RS16260 PF00905 Penicillin binding protein transpeptidase domain YPDSF_RS16260 PF03717 Penicillin-binding Protein dimerisation domain YPDSF_RS16265 PF04999 YPDSF_RS16265 YPDSF_RS16270 PF01795 MraW methylase family YPDSF_RS16275 PF02381 MraZ protein YPDSF_RS16280 PF06610 YPDSF_RS16280 YPDSF_RS16285 PF01797 Transposase IS200 like YPDSF_RS16290 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS16290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPDSF_RS16300 PF01797 Transposase IS200 like YPDSF_RS16305 PF01842 ACT domain YPDSF_RS16305 PF10369 Small subunit of acetolactate synthase YPDSF_RS16310 PF00205 Thiamine pyrophosphate enzyme, central domain YPDSF_RS16310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPDSF_RS16310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPDSF_RS16320 PF00872 YPDSF_RS16320 YPDSF_RS16325 PF00501 AMP-binding enzyme YPDSF_RS16335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS16335 PF03466 LysR substrate binding domain YPDSF_RS16340 PF00682 HMGL-like YPDSF_RS16340 PF08502 LeuA allosteric (dimerisation) domain YPDSF_RS16345 PF00180 Isocitrate/isopropylmalate dehydrogenase YPDSF_RS16350 PF00330 Aconitase family (aconitate hydratase) YPDSF_RS16355 PF00694 Aconitase C-terminal domain YPDSF_RS16360 PF07690 Major Facilitator Superfamily YPDSF_RS16370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPDSF_RS16370 PF12793 YPDSF_RS16370 YPDSF_RS16380 PF13343 Bacterial extracellular solute-binding protein YPDSF_RS16385 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS16390 PF00005 ABC transporter YPDSF_RS16395 PF09335 YPDSF_RS16395 YPDSF_RS16400 PF00136 DNA polymerase family B YPDSF_RS16400 PF03104 DNA polymerase family B, exonuclease domain YPDSF_RS16405 PF00176 SNF2 family N-terminal domain YPDSF_RS16405 PF00271 Helicase conserved C-terminal domain YPDSF_RS16405 PF12137 RNA polymerase recycling family C-terminal YPDSF_RS16415 PF06744 YPDSF_RS16415 YPDSF_RS16415 PF06761 YPDSF_RS16415 YPDSF_RS16415 PF14331 YPDSF_RS16415 YPDSF_RS16420 PF00691 OmpA family YPDSF_RS16420 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) YPDSF_RS16425 PF05936 YPDSF_RS16425 YPDSF_RS16430 PF12790 Type VI secretion lipoprotein YPDSF_RS16435 PF13665 YPDSF_RS16435 YPDSF_RS16440 PF12059 YPDSF_RS16440 YPDSF_RS16445 PF00805 Pentapeptide repeats (8 copies) YPDSF_RS16445 PF13599 Pentapeptide repeats (9 copies) YPDSF_RS16450 PF09937 YPDSF_RS16450 YPDSF_RS16450 PF13599 Pentapeptide repeats (9 copies) YPDSF_RS16455 PF05954 Phage late control gene D protein (GPD) YPDSF_RS16460 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS16460 PF02861 Clp amino terminal domain YPDSF_RS16460 PF07724 AAA domain (Cdc48 subfamily) YPDSF_RS16465 PF06996 YPDSF_RS16465 YPDSF_RS16470 PF05947 YPDSF_RS16470 YPDSF_RS16475 PF04965 Gene 25-like lysozyme YPDSF_RS16480 PF05638 Protein of unknown function (DUF796) YPDSF_RS16485 PF05943 YPDSF_RS16485 YPDSF_RS16490 PF05591 YPDSF_RS16490 YPDSF_RS16495 PF06812 YPDSF_RS16495 YPDSF_RS16500 PF10074 YPDSF_RS16500 YPDSF_RS16505 PF00849 RNA pseudouridylate synthase YPDSF_RS16510 PF00226 DnaJ domain YPDSF_RS16510 PF05099 Tellurite resistance protein TerB YPDSF_RS16515 PF03968 OstA-like protein YPDSF_RS16515 PF04453 Organic solvent tolerance protein YPDSF_RS16520 PF00639 PPIC-type PPIASE domain YPDSF_RS16520 PF09312 SurA N-terminal domain YPDSF_RS16525 PF04166 Pyridoxal phosphate biosynthetic protein PdxA YPDSF_RS16530 PF00398 Ribosomal RNA adenine dimethylase YPDSF_RS16535 PF04379 Protein of unknown function (DUF525) YPDSF_RS16540 PF00149 Calcineurin-like phosphoesterase YPDSF_RS16545 PF12582 YPDSF_RS16545 YPDSF_RS16550 PF12582 YPDSF_RS16550 YPDSF_RS16560 PF00186 Dihydrofolate reductase YPDSF_RS16565 PF12821 YPDSF_RS16565 YPDSF_RS16570 PF06738 YPDSF_RS16570 YPDSF_RS16575 PF01810 YPDSF_RS16575 YPDSF_RS16580 PF02142 MGS-like domain YPDSF_RS16580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YPDSF_RS16580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YPDSF_RS16585 PF00117 Glutamine amidotransferase class-I YPDSF_RS16585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YPDSF_RS16590 PF01113 Dihydrodipicolinate reductase, N-terminus YPDSF_RS16590 PF05173 Dihydrodipicolinate reductase, C-terminus YPDSF_RS16600 PF02401 LytB protein YPDSF_RS16605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPDSF_RS16610 PF01252 YPDSF_RS16610 YPDSF_RS16615 PF00133 tRNA synthetases class I (I, L, M and V) YPDSF_RS16615 PF06827 Zinc finger found in FPG and IleRS YPDSF_RS16615 PF08264 Anticodon-binding domain of tRNA YPDSF_RS16620 PF01687 Riboflavin kinase YPDSF_RS16620 PF06574 FAD synthetase YPDSF_RS16630 PF01649 Ribosomal protein S20 YPDSF_RS16635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS16635 PF03466 LysR substrate binding domain YPDSF_RS16640 PF06965 Na+/H+ antiporter 1 YPDSF_RS16645 PF00226 DnaJ domain YPDSF_RS16645 PF00684 DnaJ central domain YPDSF_RS16645 PF01556 DnaJ C terminal domain YPDSF_RS16650 PF00012 Hsp70 protein YPDSF_RS16655 PF01184 YPDSF_RS16655 YPDSF_RS16665 PF07690 Major Facilitator Superfamily YPDSF_RS16670 PF00994 Probable molybdopterin binding domain YPDSF_RS16675 PF00923 Transaldolase YPDSF_RS16680 PF03883 YPDSF_RS16680 YPDSF_RS16685 PF00291 Pyridoxal-phosphate dependent enzyme YPDSF_RS16685 PF14821 Threonine synthase N terminus YPDSF_RS16690 PF00288 GHMP kinases N terminal domain YPDSF_RS16690 PF08544 GHMP kinases C terminal YPDSF_RS16695 PF00696 Amino acid kinase family YPDSF_RS16695 PF00742 Homoserine dehydrogenase YPDSF_RS16695 PF01842 ACT domain YPDSF_RS16695 PF03447 Homoserine dehydrogenase, NAD binding domain YPDSF_RS16695 PF13840 ACT domain YPDSF_RS16700 PF00072 Response regulator receiver domain YPDSF_RS16700 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS16705 PF05981 YPDSF_RS16705 YPDSF_RS16710 PF06445 GyrI-like small molecule binding domain YPDSF_RS16710 PF12833 Helix-turn-helix domain YPDSF_RS16715 PF00300 Histidine phosphatase superfamily (branch 1) YPDSF_RS16720 PF01931 Protein of unknown function DUF84 YPDSF_RS16725 PF01371 Trp repressor protein YPDSF_RS16730 PF01464 Transglycosylase SLT domain YPDSF_RS16730 PF14718 Soluble lytic murein transglycosylase L domain YPDSF_RS16735 PF00122 E1-E2 ATPase YPDSF_RS16735 PF00689 Cation transporting ATPase, C-terminus YPDSF_RS16735 PF00690 Cation transporter/ATPase, N-terminus YPDSF_RS16735 PF00702 haloacid dehalogenase-like hydrolase YPDSF_RS16740 PF13689 YPDSF_RS16740 YPDSF_RS16745 PF00990 GGDEF domain YPDSF_RS16745 PF17152 YPDSF_RS16745 YPDSF_RS16750 PF00691 OmpA family YPDSF_RS16755 PF00005 ABC transporter YPDSF_RS16755 PF12848 ABC transporter YPDSF_RS16765 PF01381 Helix-turn-helix YPDSF_RS16765 PF13521 AAA domain YPDSF_RS16770 PF13481 AAA domain YPDSF_RS16770 PF13541 Subunit ChlI of Mg-chelatase YPDSF_RS16775 PF12710 haloacid dehalogenase-like hydrolase YPDSF_RS16780 PF10144 YPDSF_RS16780 YPDSF_RS16785 PF01048 Phosphorylase superfamily YPDSF_RS16790 PF01676 Metalloenzyme superfamily YPDSF_RS16795 PF00591 Glycosyl transferase family, a/b domain YPDSF_RS16795 PF02885 Glycosyl transferase family, helical bundle domain YPDSF_RS16795 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain YPDSF_RS16800 PF01791 DeoC/LacD family aldolase YPDSF_RS16810 PF01026 TatD related DNase YPDSF_RS16815 PF01734 Patatin-like phospholipase YPDSF_RS16820 PF07043 YPDSF_RS16820 YPDSF_RS16825 PF04972 BON domain YPDSF_RS16830 PF00009 Elongation factor Tu GTP binding domain YPDSF_RS16830 PF03144 Elongation factor Tu domain 2 YPDSF_RS16830 PF16658 YPDSF_RS16830 YPDSF_RS16835 PF00583 Acetyltransferase (GNAT) family YPDSF_RS16840 PF03603 DNA polymerase III psi subunit YPDSF_RS16845 PF05175 Methyltransferase small domain YPDSF_RS16845 PF08468 Methyltransferase small domain N-terminal YPDSF_RS16855 PF07256 YPDSF_RS16855 YPDSF_RS16860 PF00990 GGDEF domain YPDSF_RS16865 PF01095 Pectinesterase YPDSF_RS16885 PF00873 AcrB/AcrD/AcrF family YPDSF_RS16890 PF16576 YPDSF_RS16890 YPDSF_RS16895 PF06305 YPDSF_RS16895 YPDSF_RS16905 PF04932 YPDSF_RS16905 YPDSF_RS16910 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YPDSF_RS16915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPDSF_RS16915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPDSF_RS16920 PF04198 Putative sugar-binding domain YPDSF_RS16930 PF00005 ABC transporter YPDSF_RS16935 PF02653 YPDSF_RS16935 YPDSF_RS16940 PF02653 YPDSF_RS16940 YPDSF_RS16945 PF13407 Periplasmic binding protein domain YPDSF_RS16950 PF01791 DeoC/LacD family aldolase YPDSF_RS16955 PF03992 Antibiotic biosynthesis monooxygenase YPDSF_RS16960 PF10696 YPDSF_RS16960 YPDSF_RS16965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YPDSF_RS16965 PF00381 PTS HPr component phosphorylation site YPDSF_RS16965 PF00391 PEP-utilising enzyme, mobile domain YPDSF_RS16965 PF02896 PEP-utilising enzyme, TIM barrel domain YPDSF_RS16965 PF05524 PEP-utilising enzyme, N-terminal YPDSF_RS16970 PF02378 Phosphotransferase system, EIIC YPDSF_RS16975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPDSF_RS16980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YPDSF_RS16985 PF12833 Helix-turn-helix domain YPDSF_RS16995 PF05987 YPDSF_RS16995 YPDSF_RS17000 PF01435 Peptidase family M48 YPDSF_RS17010 PF09983 YPDSF_RS17010 YPDSF_RS17010 PF11795 YPDSF_RS17010 YPDSF_RS17015 PF13558 Putative exonuclease SbcCD, C subunit YPDSF_RS17040 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS17045 PF01555 DNA methylase YPDSF_RS17050 PF01527 Transposase YPDSF_RS17060 PF10117 YPDSF_RS17060 YPDSF_RS17065 PF07728 AAA domain (dynein-related subfamily) YPDSF_RS17070 PF00665 Integrase core domain YPDSF_RS17070 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS17075 PF01695 IstB-like ATP binding protein YPDSF_RS17080 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS17085 PF03235 YPDSF_RS17085 YPDSF_RS17085 PF07510 YPDSF_RS17085 YPDSF_RS17090 PF00589 Phage integrase family YPDSF_RS17090 PF13356 Domain of unknown function (DUF4102) YPDSF_RS17100 PF03739 YPDSF_RS17100 YPDSF_RS17105 PF03739 YPDSF_RS17105 YPDSF_RS17110 PF00883 Cytosol aminopeptidase family, catalytic domain YPDSF_RS17110 PF02789 Cytosol aminopeptidase family, N-terminal domain YPDSF_RS17115 PF04364 DNA polymerase III chi subunit, HolC YPDSF_RS17120 PF00133 tRNA synthetases class I (I, L, M and V) YPDSF_RS17120 PF08264 Anticodon-binding domain of tRNA YPDSF_RS17120 PF10458 Valyl tRNA synthetase tRNA binding arm YPDSF_RS17125 PF00583 Acetyltransferase (GNAT) family YPDSF_RS17130 PF06877 Regulator of ribonuclease activity B YPDSF_RS17135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YPDSF_RS17135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YPDSF_RS17140 PF04074 Domain of unknown function (DUF386) YPDSF_RS17150 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS17155 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS17155 PF12911 YPDSF_RS17155 YPDSF_RS17160 PF00005 ABC transporter YPDSF_RS17165 PF00005 ABC transporter YPDSF_RS17170 PF03477 ATP cone domain YPDSF_RS17170 PF13597 Anaerobic ribonucleoside-triphosphate reductase YPDSF_RS17175 PF13353 4Fe-4S single cluster domain YPDSF_RS17180 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS17180 PF07702 UTRA domain YPDSF_RS17185 PF06754 YPDSF_RS17185 YPDSF_RS17190 PF05845 Bacterial phosphonate metabolism protein (PhnH) YPDSF_RS17195 PF05861 YPDSF_RS17195 YPDSF_RS17200 PF06007 YPDSF_RS17200 YPDSF_RS17205 PF00005 ABC transporter YPDSF_RS17210 PF00005 ABC transporter YPDSF_RS17215 PF07969 Amidohydrolase family YPDSF_RS17220 PF13238 AAA domain YPDSF_RS17225 PF12706 Beta-lactamase superfamily domain YPDSF_RS17240 PF05426 Alginate lyase YPDSF_RS17245 PF00005 ABC transporter YPDSF_RS17245 PF08402 TOBE domain YPDSF_RS17250 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS17255 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS17260 PF01547 Bacterial extracellular solute-binding protein YPDSF_RS17265 PF05426 Alginate lyase YPDSF_RS17270 PF05426 Alginate lyase YPDSF_RS17270 PF07940 Heparinase II/III-like protein YPDSF_RS17275 PF01541 GIY-YIG catalytic domain YPDSF_RS17280 PF00583 Acetyltransferase (GNAT) family YPDSF_RS17285 PF02036 SCP-2 sterol transfer family YPDSF_RS17295 PF01136 YPDSF_RS17295 YPDSF_RS17300 PF01136 YPDSF_RS17300 YPDSF_RS17305 PF02321 Outer membrane efflux protein YPDSF_RS17310 PF00873 AcrB/AcrD/AcrF family YPDSF_RS17315 PF16576 YPDSF_RS17315 YPDSF_RS17320 PF00296 Luciferase-like monooxygenase YPDSF_RS17325 PF01381 Helix-turn-helix YPDSF_RS17330 PF05973 YPDSF_RS17330 YPDSF_RS17340 PF00270 DEAD/DEAH box helicase YPDSF_RS17340 PF00271 Helicase conserved C-terminal domain YPDSF_RS17340 PF03880 DbpA RNA binding domain YPDSF_RS17340 PF12343 YPDSF_RS17340 YPDSF_RS17345 PF07719 Tetratricopeptide repeat YPDSF_RS17345 PF13181 Tetratricopeptide repeat YPDSF_RS17350 PF00013 KH domain YPDSF_RS17350 PF00575 S1 RNA binding domain YPDSF_RS17350 PF01138 3' exoribonuclease family, domain 1 YPDSF_RS17350 PF03725 3' exoribonuclease family, domain 2 YPDSF_RS17350 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YPDSF_RS17355 PF13518 Helix-turn-helix domain YPDSF_RS17360 PF00665 Integrase core domain YPDSF_RS17360 PF13276 YPDSF_RS17360 YPDSF_RS17370 PF06092 YPDSF_RS17370 YPDSF_RS17380 PF01266 FAD dependent oxidoreductase YPDSF_RS17380 PF16901 YPDSF_RS17380 YPDSF_RS17385 PF00343 Carbohydrate phosphorylase YPDSF_RS17390 PF00534 Glycosyl transferases group 1 YPDSF_RS17390 PF08323 Starch synthase catalytic domain YPDSF_RS17395 PF00483 Nucleotidyl transferase YPDSF_RS17400 PF00128 Alpha amylase, catalytic domain YPDSF_RS17400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YPDSF_RS17405 PF00128 Alpha amylase, catalytic domain YPDSF_RS17405 PF02806 Alpha amylase, C-terminal all-beta domain YPDSF_RS17405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YPDSF_RS17410 PF06580 YPDSF_RS17410 YPDSF_RS17410 PF07694 5TMR of 5TMR-LYT YPDSF_RS17415 PF01476 LysM domain YPDSF_RS17415 PF02369 Bacterial Ig-like domain (group 1) YPDSF_RS17415 PF11924 Protein of unknown function (DUF3442) YPDSF_RS17440 PF01118 Semialdehyde dehydrogenase, NAD binding domain YPDSF_RS17440 PF02774 Semialdehyde dehydrogenase, dimerisation domain YPDSF_RS17445 PF01914 YPDSF_RS17445 YPDSF_RS17465 PF01202 Shikimate kinase YPDSF_RS17470 PF02447 YPDSF_RS17470 YPDSF_RS17475 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS17475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YPDSF_RS17480 PF02678 Pirin YPDSF_RS17490 PF00072 Response regulator receiver domain YPDSF_RS17490 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS17495 PF00294 pfkB family carbohydrate kinase YPDSF_RS17500 PF01116 Fructose-bisphosphate aldolase class-II YPDSF_RS17505 PF07385 Protein of unknown function (DUF1498) YPDSF_RS17510 PF13407 Periplasmic binding protein domain YPDSF_RS17515 PF02653 YPDSF_RS17515 YPDSF_RS17520 PF00005 ABC transporter YPDSF_RS17530 PF03486 HI0933-like protein YPDSF_RS17535 PF01384 YPDSF_RS17535 YPDSF_RS17545 PF01797 Transposase IS200 like YPDSF_RS17550 PF10625 YPDSF_RS17550 YPDSF_RS17555 PF00582 Universal stress protein family YPDSF_RS17560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YPDSF_RS17560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YPDSF_RS17565 PF08548 Peptidase M10 serralysin C terminal YPDSF_RS17570 PF04445 Putative SAM-dependent methyltransferase YPDSF_RS17575 PF01432 Peptidase family M3 YPDSF_RS17580 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ YPDSF_RS17585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPDSF_RS17585 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS17590 PF05651 YPDSF_RS17590 YPDSF_RS17590 PF13556 PucR C-terminal helix-turn-helix domain YPDSF_RS17595 PF02447 YPDSF_RS17595 YPDSF_RS17600 PF02595 Glycerate kinase family YPDSF_RS17605 PF06092 YPDSF_RS17605 YPDSF_RS17610 PF06092 YPDSF_RS17610 YPDSF_RS17615 PF11692 YPDSF_RS17615 YPDSF_RS17620 PF03212 Pertactin YPDSF_RS17620 PF03797 Autotransporter beta-domain YPDSF_RS17625 PF03631 YPDSF_RS17625 YPDSF_RS17630 PF02611 CDP-diacylglycerol pyrophosphatase YPDSF_RS17635 PF05170 YPDSF_RS17635 YPDSF_RS17640 PF00563 EAL domain YPDSF_RS17645 PF01361 Tautomerase enzyme YPDSF_RS17650 PF00294 pfkB family carbohydrate kinase YPDSF_RS17655 PF00675 Insulinase (Peptidase family M16) YPDSF_RS17655 PF05193 Peptidase M16 inactive domain YPDSF_RS17660 PF00375 Sodium:dicarboxylate symporter family YPDSF_RS17665 PF00754 F5/8 type C domain YPDSF_RS17675 PF06178 Oligogalacturonate-specific porin protein (KdgM) YPDSF_RS17680 PF00563 EAL domain YPDSF_RS17680 PF00672 HAMP domain YPDSF_RS17680 PF00990 GGDEF domain YPDSF_RS17680 PF17154 YPDSF_RS17680 YPDSF_RS17685 PF01270 Glycosyl hydrolases family 8 YPDSF_RS17690 PF00005 ABC transporter YPDSF_RS17690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPDSF_RS17695 PF00005 ABC transporter YPDSF_RS17695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YPDSF_RS17705 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS17710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YPDSF_RS17720 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YPDSF_RS17720 PF08479 POTRA domain, ShlB-type YPDSF_RS17725 PF05860 haemagglutination activity domain YPDSF_RS17735 PF07690 Major Facilitator Superfamily YPDSF_RS17740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS17740 PF05231 YPDSF_RS17740 YPDSF_RS17740 PF07730 Histidine kinase YPDSF_RS17745 PF00072 Response regulator receiver domain YPDSF_RS17745 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS17750 PF00884 Sulfatase YPDSF_RS17750 PF08019 YPDSF_RS17750 YPDSF_RS17755 PF01695 IstB-like ATP binding protein YPDSF_RS17760 PF00665 Integrase core domain YPDSF_RS17760 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS17765 PF13673 Acetyltransferase (GNAT) domain YPDSF_RS17770 PF00485 Phosphoribulokinase / Uridine kinase family YPDSF_RS17775 PF02237 Biotin protein ligase C terminal domain YPDSF_RS17775 PF03099 Biotin/lipoate A/B protein ligase family YPDSF_RS17775 PF08279 HTH domain YPDSF_RS17780 PF01565 FAD binding domain YPDSF_RS17780 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YPDSF_RS17815 PF12724 Flavodoxin domain YPDSF_RS17820 PF02386 Cation transport protein YPDSF_RS17825 PF01205 Uncharacterized protein family UPF0029 YPDSF_RS17825 PF09186 Domain of unknown function (DUF1949) YPDSF_RS17830 PF00557 Metallopeptidase family M24 YPDSF_RS17835 PF00378 Enoyl-CoA hydratase/isomerase family YPDSF_RS17835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YPDSF_RS17835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YPDSF_RS17840 PF00108 Thiolase, N-terminal domain YPDSF_RS17840 PF02803 Thiolase, C-terminal domain YPDSF_RS17845 PF00175 Oxidoreductase NAD-binding domain YPDSF_RS17845 PF00970 Oxidoreductase FAD-binding domain YPDSF_RS17850 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YPDSF_RS17855 PF02357 Transcription termination factor nusG YPDSF_RS17860 PF00490 Delta-aminolevulinic acid dehydratase YPDSF_RS17865 PF01026 TatD related DNase YPDSF_RS17870 PF00902 Sec-independent protein translocase protein (TatC) YPDSF_RS17880 PF02416 mttA/Hcf106 family YPDSF_RS17885 PF03109 YPDSF_RS17885 YPDSF_RS17890 PF02036 SCP-2 sterol transfer family YPDSF_RS17895 PF01209 ubiE/COQ5 methyltransferase family YPDSF_RS17900 PF02646 YPDSF_RS17900 YPDSF_RS17905 PF09335 YPDSF_RS17905 YPDSF_RS17910 PF02554 YPDSF_RS17910 YPDSF_RS17910 PF13722 YPDSF_RS17910 YPDSF_RS17915 PF13350 Tyrosine phosphatase family YPDSF_RS17920 PF01048 Phosphorylase superfamily YPDSF_RS17925 PF01738 Dienelactone hydrolase family YPDSF_RS17930 PF01717 Cobalamin-independent synthase, Catalytic domain YPDSF_RS17930 PF08267 Cobalamin-independent synthase, N-terminal domain YPDSF_RS17935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS17935 PF03466 LysR substrate binding domain YPDSF_RS17940 PF00892 EamA-like transporter family YPDSF_RS17945 PF03547 YPDSF_RS17945 YPDSF_RS17950 PF03009 Glycerophosphoryl diester phosphodiesterase family YPDSF_RS17955 PF00005 ABC transporter YPDSF_RS17955 PF08402 TOBE domain YPDSF_RS17960 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS17965 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS17970 PF13416 Bacterial extracellular solute-binding protein YPDSF_RS17975 PF04449 CS1 type fimbrial major subunit YPDSF_RS17980 PF16967 YPDSF_RS17980 YPDSF_RS17995 PF04449 CS1 type fimbrial major subunit YPDSF_RS18010 PF00005 ABC transporter YPDSF_RS18015 PF00005 ABC transporter YPDSF_RS18015 PF12399 Branched-chain amino acid ATP-binding cassette transporter YPDSF_RS18020 PF02653 YPDSF_RS18020 YPDSF_RS18020 PF11862 YPDSF_RS18020 YPDSF_RS18025 PF02653 YPDSF_RS18025 YPDSF_RS18030 PF13458 Periplasmic binding protein YPDSF_RS18035 PF12568 Acetyltransferase (GNAT) domain YPDSF_RS18040 PF01797 Transposase IS200 like YPDSF_RS18050 PF00140 Sigma-70 factor, region 1 YPDSF_RS18050 PF04542 Sigma-70 region 2 YPDSF_RS18050 PF04545 Sigma-70, region 4 YPDSF_RS18055 PF02687 YPDSF_RS18055 YPDSF_RS18060 PF00005 ABC transporter YPDSF_RS18065 PF00448 SRP54-type protein, GTPase domain YPDSF_RS18065 PF02881 SRP54-type protein, helical bundle domain YPDSF_RS18075 PF03602 Conserved hypothetical protein 95 YPDSF_RS18080 PF06611 YPDSF_RS18080 YPDSF_RS18085 PF10694 Protein of unknown function (DUF2500) YPDSF_RS18090 PF08850 YPDSF_RS18090 YPDSF_RS18095 PF07947 YPDSF_RS18095 YPDSF_RS18100 PF00122 E1-E2 ATPase YPDSF_RS18100 PF00403 Heavy-metal-associated domain YPDSF_RS18100 PF00702 haloacid dehalogenase-like hydrolase YPDSF_RS18105 PF01206 Sulfurtransferase TusA YPDSF_RS18110 PF02592 YPDSF_RS18110 YPDSF_RS18115 PF08786 Domain of unknown function (DUF1795) YPDSF_RS18120 PF02754 YPDSF_RS18120 YPDSF_RS18120 PF13183 4Fe-4S dicluster domain YPDSF_RS18125 PF00890 FAD binding domain YPDSF_RS18130 PF01266 FAD dependent oxidoreductase YPDSF_RS18130 PF04324 BFD-like [2Fe-2S] binding domain YPDSF_RS18130 PF16901 YPDSF_RS18130 YPDSF_RS18140 PF03009 Glycerophosphoryl diester phosphodiesterase family YPDSF_RS18145 PF03272 YPDSF_RS18145 YPDSF_RS18150 PF08282 haloacid dehalogenase-like hydrolase YPDSF_RS18155 PF12146 Putative lysophospholipase YPDSF_RS18160 PF01810 YPDSF_RS18160 YPDSF_RS18165 PF01810 YPDSF_RS18165 YPDSF_RS18170 PF00270 DEAD/DEAH box helicase YPDSF_RS18170 PF00271 Helicase conserved C-terminal domain YPDSF_RS18170 PF00570 HRDC domain YPDSF_RS18170 PF09382 RQC domain YPDSF_RS18170 PF16124 YPDSF_RS18170 YPDSF_RS18175 PF02253 Phospholipase A1 YPDSF_RS18180 PF03061 Thioesterase superfamily YPDSF_RS18185 PF00892 EamA-like transporter family YPDSF_RS18190 PF01544 CorA-like Mg2+ transporter protein YPDSF_RS18195 PF09370 TIM-barrel signal transduction protein YPDSF_RS18200 PF06792 Uncharacterised protein family (UPF0261) YPDSF_RS18205 PF00440 Bacterial regulatory proteins, tetR family YPDSF_RS18210 PF00580 UvrD/REP helicase N-terminal domain YPDSF_RS18210 PF13361 UvrD-like helicase C-terminal domain YPDSF_RS18215 PF00702 haloacid dehalogenase-like hydrolase YPDSF_RS18220 PF00589 Phage integrase family YPDSF_RS18220 PF02899 Phage integrase, N-terminal SAM-like domain YPDSF_RS18225 PF04340 Protein of unknown function, DUF484 YPDSF_RS18230 PF01678 Diaminopimelate epimerase YPDSF_RS18235 PF13627 YPDSF_RS18235 YPDSF_RS18240 PF01491 Frataxin-like domain YPDSF_RS18245 PF01295 YPDSF_RS18245 YPDSF_RS18245 PF12633 YPDSF_RS18245 YPDSF_RS18250 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain YPDSF_RS18250 PF03900 Porphobilinogen deaminase, C-terminal domain YPDSF_RS18255 PF02602 Uroporphyrinogen-III synthase HemD YPDSF_RS18260 PF04375 YPDSF_RS18260 YPDSF_RS18265 PF07219 YPDSF_RS18265 YPDSF_RS18270 PF01797 Transposase IS200 like YPDSF_RS18295 PF00324 Amino acid permease YPDSF_RS18300 PF03808 YPDSF_RS18300 YPDSF_RS18305 PF06899 YPDSF_RS18305 YPDSF_RS18310 PF07429 YPDSF_RS18310 YPDSF_RS18315 PF01943 YPDSF_RS18315 YPDSF_RS18320 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YPDSF_RS18325 PF00583 Acetyltransferase (GNAT) family YPDSF_RS18330 PF00483 Nucleotidyl transferase YPDSF_RS18335 PF16363 YPDSF_RS18335 YPDSF_RS18340 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YPDSF_RS18340 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YPDSF_RS18340 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YPDSF_RS18345 PF02350 UDP-N-acetylglucosamine 2-epimerase YPDSF_RS18350 PF02706 Chain length determinant protein YPDSF_RS18355 PF00953 Glycosyl transferase family 4 YPDSF_RS18360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPDSF_RS18360 PF07497 Rho termination factor, RNA-binding domain YPDSF_RS18360 PF07498 Rho termination factor, N-terminal domain YPDSF_RS18365 PF00085 Thioredoxin YPDSF_RS18370 PF00270 DEAD/DEAH box helicase YPDSF_RS18370 PF00271 Helicase conserved C-terminal domain YPDSF_RS18375 PF02541 Ppx/GppA phosphatase family YPDSF_RS18380 PF00580 UvrD/REP helicase N-terminal domain YPDSF_RS18380 PF13361 UvrD-like helicase C-terminal domain YPDSF_RS18390 PF13616 PPIC-type PPIASE domain YPDSF_RS18395 PF05096 Glutamine cyclotransferase YPDSF_RS18405 PF16970 YPDSF_RS18405 YPDSF_RS18410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS18410 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS18415 PF00577 Outer membrane usher protein YPDSF_RS18415 PF13953 PapC C-terminal domain YPDSF_RS18415 PF13954 PapC N-terminal domain YPDSF_RS18420 PF00419 Fimbrial protein YPDSF_RS18425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS18425 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS18435 PF01320 Colicin immunity protein / pyocin immunity protein YPDSF_RS18450 PF06958 S-type Pyocin YPDSF_RS18460 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain YPDSF_RS18460 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain YPDSF_RS18465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS18465 PF03466 LysR substrate binding domain YPDSF_RS18475 PF11692 YPDSF_RS18475 YPDSF_RS18480 PF11692 YPDSF_RS18480 YPDSF_RS18485 PF06092 YPDSF_RS18485 YPDSF_RS18490 PF06092 YPDSF_RS18490 YPDSF_RS18495 PF06092 YPDSF_RS18495 YPDSF_RS18500 PF00291 Pyridoxal-phosphate dependent enzyme YPDSF_RS18500 PF00585 C-terminal regulatory domain of Threonine dehydratase YPDSF_RS18505 PF00920 Dehydratase family YPDSF_RS18510 PF01063 Aminotransferase class IV YPDSF_RS18515 PF13710 ACT domain YPDSF_RS18520 PF00205 Thiamine pyrophosphate enzyme, central domain YPDSF_RS18520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YPDSF_RS18520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YPDSF_RS18525 PF01078 Magnesium chelatase, subunit ChlI YPDSF_RS18525 PF13335 YPDSF_RS18525 YPDSF_RS18525 PF13541 Subunit ChlI of Mg-chelatase YPDSF_RS18530 PF04219 YPDSF_RS18530 YPDSF_RS18535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS18535 PF03466 LysR substrate binding domain YPDSF_RS18540 PF02653 YPDSF_RS18540 YPDSF_RS18545 PF02653 YPDSF_RS18545 YPDSF_RS18550 PF00005 ABC transporter YPDSF_RS18555 PF13407 Periplasmic binding protein domain YPDSF_RS18595 PF01177 Asp/Glu/Hydantoin racemase YPDSF_RS18600 PF00593 TonB dependent receptor YPDSF_RS18600 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS18610 PF05958 tRNA (Uracil-5-)-methyltransferase YPDSF_RS18615 PF07226 YPDSF_RS18615 YPDSF_RS18620 PF00440 Bacterial regulatory proteins, tetR family YPDSF_RS18625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPDSF_RS18625 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS18630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS18630 PF03466 LysR substrate binding domain YPDSF_RS18635 PF00462 Glutaredoxin YPDSF_RS18635 PF08534 Redoxin YPDSF_RS18640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPDSF_RS18640 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS18645 PF03544 Gram-negative bacterial TonB protein C-terminal YPDSF_RS18650 PF13437 HlyD family secretion protein YPDSF_RS18650 PF13533 Biotin-lipoyl like YPDSF_RS18655 PF00005 ABC transporter YPDSF_RS18655 PF00664 ABC transporter transmembrane region YPDSF_RS18660 PF06438 Heme-binding protein A (HasA) YPDSF_RS18665 PF00593 TonB dependent receptor YPDSF_RS18665 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS18675 PF00206 Lyase YPDSF_RS18675 PF14698 Argininosuccinate lyase C-terminal YPDSF_RS18680 PF00696 Amino acid kinase family YPDSF_RS18685 PF01118 Semialdehyde dehydrogenase, NAD binding domain YPDSF_RS18685 PF02774 Semialdehyde dehydrogenase, dimerisation domain YPDSF_RS18690 PF01546 Peptidase family M20/M25/M40 YPDSF_RS18690 PF07687 Peptidase dimerisation domain YPDSF_RS18695 PF00311 Phosphoenolpyruvate carboxylase YPDSF_RS18700 PF13518 Helix-turn-helix domain YPDSF_RS18705 PF00665 Integrase core domain YPDSF_RS18705 PF13276 YPDSF_RS18705 YPDSF_RS18710 PF00312 Ribosomal protein S15 YPDSF_RS18715 PF01509 TruB family pseudouridylate synthase (N terminal domain) YPDSF_RS18715 PF09157 Pseudouridine synthase II TruB, C-terminal YPDSF_RS18715 PF16198 YPDSF_RS18715 YPDSF_RS18720 PF02033 Ribosome-binding factor A YPDSF_RS18725 PF00009 Elongation factor Tu GTP binding domain YPDSF_RS18725 PF03144 Elongation factor Tu domain 2 YPDSF_RS18725 PF04760 Translation initiation factor IF-2, N-terminal region YPDSF_RS18725 PF08364 YPDSF_RS18725 YPDSF_RS18725 PF11987 Translation-initiation factor 2 YPDSF_RS18730 PF08529 NusA N-terminal domain YPDSF_RS18730 PF13184 NusA-like KH domain YPDSF_RS18730 PF14520 Helix-hairpin-helix domain YPDSF_RS18735 PF02576 Uncharacterised BCR, YhbC family COG0779 YPDSF_RS18750 PF03840 Preprotein translocase SecG subunit YPDSF_RS18755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YPDSF_RS18755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YPDSF_RS18755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YPDSF_RS18755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YPDSF_RS18760 PF00809 Pterin binding enzyme YPDSF_RS18765 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS18765 PF01434 Peptidase family M41 YPDSF_RS18765 PF06480 FtsH Extracellular YPDSF_RS18770 PF01728 FtsJ-like methyltransferase YPDSF_RS18775 PF01985 CRS1 / YhbY (CRM) domain YPDSF_RS18780 PF01272 Transcription elongation factor, GreA/GreB, C-term YPDSF_RS18780 PF03449 Transcription elongation factor, N-terminal YPDSF_RS18785 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family YPDSF_RS18790 PF00072 Response regulator receiver domain YPDSF_RS18790 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS18795 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS18795 PF00672 HAMP domain YPDSF_RS18795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS18800 PF01018 GTP1/OBG YPDSF_RS18800 PF01926 50S ribosome-binding GTPase YPDSF_RS18805 PF00892 EamA-like transporter family YPDSF_RS18810 PF01016 Ribosomal L27 protein YPDSF_RS18815 PF00829 Ribosomal prokaryotic L21 protein YPDSF_RS18820 PF00348 Polyprenyl synthetase YPDSF_RS18825 PF02316 Mu DNA-binding domain YPDSF_RS18830 PF13693 Winged helix-turn-helix DNA-binding YPDSF_RS18835 PF00056 lactate/malate dehydrogenase, NAD binding domain YPDSF_RS18835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YPDSF_RS18840 PF01316 Arginine repressor, DNA binding domain YPDSF_RS18840 PF02863 Arginine repressor, C-terminal domain YPDSF_RS18845 PF07338 Protein of unknown function (DUF1471) YPDSF_RS18855 PF01225 Mur ligase family, catalytic domain YPDSF_RS18855 PF02875 Mur ligase family, glutamate ligase domain YPDSF_RS18855 PF08245 Mur ligase middle domain YPDSF_RS18860 PF00316 Fructose-1-6-bisphosphatase YPDSF_RS18865 PF00719 Inorganic pyrophosphatase YPDSF_RS18870 PF06094 AIG2-like family YPDSF_RS18875 PF04357 YPDSF_RS18875 YPDSF_RS18880 PF01103 Surface antigen YPDSF_RS18880 PF07244 Surface antigen variable number repeat YPDSF_RS18885 PF01625 Peptide methionine sulfoxide reductase YPDSF_RS18890 PF00571 CBS domain YPDSF_RS18890 PF01595 YPDSF_RS18890 YPDSF_RS18890 PF03471 Transporter associated domain YPDSF_RS18895 PF06526 Protein of unknown function (DUF1107) YPDSF_RS18900 PF09695 YPDSF_RS18900 YPDSF_RS18905 PF00459 Inositol monophosphatase family YPDSF_RS18910 PF00149 Calcineurin-like phosphoesterase YPDSF_RS18910 PF02872 5'-nucleotidase, C-terminal domain YPDSF_RS18915 PF01814 Hemerythrin HHE cation binding domain YPDSF_RS18915 PF04405 YPDSF_RS18915 YPDSF_RS18920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YPDSF_RS18920 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YPDSF_RS18925 PF04225 Opacity-associated protein A LysM-like domain YPDSF_RS18925 PF08525 YPDSF_RS18925 YPDSF_RS18930 PF12582 YPDSF_RS18930 YPDSF_RS18935 PF01797 Transposase IS200 like YPDSF_RS18945 PF01281 Ribosomal protein L9, N-terminal domain YPDSF_RS18945 PF03948 Ribosomal protein L9, C-terminal domain YPDSF_RS18950 PF01084 Ribosomal protein S18 YPDSF_RS18955 PF00436 Single-strand binding protein family YPDSF_RS18960 PF01250 Ribosomal protein S6 YPDSF_RS18970 PF00326 Prolyl oligopeptidase family YPDSF_RS18975 PF01695 IstB-like ATP binding protein YPDSF_RS18980 PF00665 Integrase core domain YPDSF_RS18980 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS18985 PF07338 Protein of unknown function (DUF1471) YPDSF_RS18990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YPDSF_RS18990 PF02770 Acyl-CoA dehydrogenase, middle domain YPDSF_RS18995 PF00588 SpoU rRNA Methylase family YPDSF_RS18995 PF08032 RNA 2'-O ribose methyltransferase substrate binding YPDSF_RS19005 PF02082 Transcriptional regulator YPDSF_RS19010 PF00709 Adenylosuccinate synthetase YPDSF_RS19015 PF09838 YPDSF_RS19015 YPDSF_RS19020 PF01145 SPFH domain / Band 7 family YPDSF_RS19025 PF01145 SPFH domain / Band 7 family YPDSF_RS19025 PF12221 YPDSF_RS19025 YPDSF_RS19030 PF01926 50S ribosome-binding GTPase YPDSF_RS19030 PF13167 YPDSF_RS19030 YPDSF_RS19030 PF16360 YPDSF_RS19030 YPDSF_RS19040 PF01715 IPP transferase YPDSF_RS19045 PF01119 DNA mismatch repair protein, C-terminal domain YPDSF_RS19045 PF08676 MutL C terminal dimerisation domain YPDSF_RS19045 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS19050 PF01476 LysM domain YPDSF_RS19050 PF01520 N-acetylmuramoyl-L-alanine amidase YPDSF_RS19050 PF11741 AMIN domain YPDSF_RS19055 PF02367 Uncharacterised P-loop hydrolase UPF0079 YPDSF_RS19060 PF01256 Carbohydrate kinase YPDSF_RS19060 PF03853 YjeF-related protein N-terminus YPDSF_RS19065 PF08331 YPDSF_RS19065 YPDSF_RS19065 PF13484 YPDSF_RS19065 YPDSF_RS19080 PF00929 Exonuclease YPDSF_RS19090 PF03193 Protein of unknown function, DUF258 YPDSF_RS19095 PF02666 YPDSF_RS19095 YPDSF_RS19100 PF00924 Mechanosensitive ion channel YPDSF_RS19100 PF12794 YPDSF_RS19100 YPDSF_RS19100 PF12795 YPDSF_RS19100 YPDSF_RS19105 PF00152 tRNA synthetases class II (D, K and N) YPDSF_RS19115 PF00890 FAD binding domain YPDSF_RS19115 PF02910 Fumarate reductase flavoprotein C-term YPDSF_RS19120 PF13085 2Fe-2S iron-sulfur cluster binding domain YPDSF_RS19120 PF13183 4Fe-4S dicluster domain YPDSF_RS19125 PF02300 Fumarate reductase subunit C YPDSF_RS19130 PF02313 Fumarate reductase subunit D YPDSF_RS19135 PF00893 Small Multidrug Resistance protein YPDSF_RS19140 PF01132 Elongation factor P (EF-P) OB domain YPDSF_RS19140 PF08207 Elongation factor P (EF-P) KOW-like domain YPDSF_RS19140 PF09285 Elongation factor P, C-terminal YPDSF_RS19145 PF04055 Radical SAM superfamily YPDSF_RS19145 PF13353 4Fe-4S single cluster domain YPDSF_RS19150 PF13698 YPDSF_RS19150 YPDSF_RS19155 PF00118 TCP-1/cpn60 chaperonin family YPDSF_RS19160 PF00166 Chaperonin 10 Kd subunit YPDSF_RS19165 PF04186 YPDSF_RS19165 YPDSF_RS19170 PF00206 Lyase YPDSF_RS19170 PF10415 Fumarase C C-terminus YPDSF_RS19175 PF03605 YPDSF_RS19175 YPDSF_RS19180 PF03091 CutA1 divalent ion tolerance protein YPDSF_RS19185 PF02683 YPDSF_RS19185 YPDSF_RS19185 PF11412 Disulphide bond corrector protein DsbC YPDSF_RS19185 PF13899 Thioredoxin-like YPDSF_RS19190 PF00384 Molybdopterin oxidoreductase YPDSF_RS19190 PF01568 Molydopterin dinucleotide binding domain YPDSF_RS19190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YPDSF_RS19195 PF12800 4Fe-4S binding domain YPDSF_RS19195 PF13187 4Fe-4S dicluster domain YPDSF_RS19200 PF07992 Pyridine nucleotide-disulphide oxidoreductase YPDSF_RS19200 PF13247 4Fe-4S dicluster domain YPDSF_RS19200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YPDSF_RS19205 PF00440 Bacterial regulatory proteins, tetR family YPDSF_RS19215 PF03272 YPDSF_RS19215 YPDSF_RS19215 PF13402 Peptidase M60-like family YPDSF_RS19235 PF06379 YPDSF_RS19235 YPDSF_RS19240 PF02311 AraC-like ligand binding domain YPDSF_RS19240 PF12833 Helix-turn-helix domain YPDSF_RS19245 PF02311 AraC-like ligand binding domain YPDSF_RS19245 PF12833 Helix-turn-helix domain YPDSF_RS19260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPDSF_RS19260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPDSF_RS19265 PF06134 L-rhamnose isomerase (RhaA) YPDSF_RS19270 PF00596 Class II Aldolase and Adducin N-terminal domain YPDSF_RS19275 PF00465 Iron-containing alcohol dehydrogenase YPDSF_RS19280 PF05336 Domain of unknown function (DUF718) YPDSF_RS19285 PF00436 Single-strand binding protein family YPDSF_RS19290 PF00005 ABC transporter YPDSF_RS19295 PF04237 YjbR YPDSF_RS19300 PF00155 Aminotransferase class I and II YPDSF_RS19305 PF00842 Alanine racemase, C-terminal domain YPDSF_RS19305 PF01168 Alanine racemase, N-terminal domain YPDSF_RS19310 PF00772 DnaB-like helicase N terminal domain YPDSF_RS19310 PF03796 DnaB-like helicase C terminal domain YPDSF_RS19315 PF00107 Zinc-binding dehydrogenase YPDSF_RS19315 PF08240 Alcohol dehydrogenase GroES-like domain YPDSF_RS19320 PF09583 YPDSF_RS19320 YPDSF_RS19325 PF01207 Dihydrouridine synthase (Dus) YPDSF_RS19330 PF01475 Ferric uptake regulator family YPDSF_RS19335 PF00717 Peptidase S24-like YPDSF_RS19335 PF01726 LexA DNA binding domain YPDSF_RS19340 PF01219 Prokaryotic diacylglycerol kinase YPDSF_RS19345 PF01553 Acyltransferase YPDSF_RS19350 PF01040 UbiA prenyltransferase family YPDSF_RS19355 PF04345 Chorismate lyase YPDSF_RS19365 PF01565 FAD binding domain YPDSF_RS19365 PF08031 Berberine and berberine like YPDSF_RS19385 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS19390 PF00577 Outer membrane usher protein YPDSF_RS19390 PF13953 PapC C-terminal domain YPDSF_RS19390 PF13954 PapC N-terminal domain YPDSF_RS19395 PF06551 YPDSF_RS19395 YPDSF_RS19400 PF02342 TerD domain YPDSF_RS19405 PF02342 TerD domain YPDSF_RS19410 PF03741 YPDSF_RS19410 YPDSF_RS19415 PF05099 Tellurite resistance protein TerB YPDSF_RS19420 PF02342 TerD domain YPDSF_RS19425 PF02342 TerD domain YPDSF_RS19430 PF15632 YPDSF_RS19430 YPDSF_RS19435 PF12500 YPDSF_RS19435 YPDSF_RS19435 PF15609 YPDSF_RS19435 YPDSF_RS19445 PF11202 YPDSF_RS19445 YPDSF_RS19445 PF15608 YPDSF_RS19445 YPDSF_RS19450 PF15617 YPDSF_RS19450 YPDSF_RS19460 PF02219 Methylenetetrahydrofolate reductase YPDSF_RS19465 PF04055 Radical SAM superfamily YPDSF_RS19470 PF06228 Haem utilisation ChuX/HutX YPDSF_RS19475 PF13460 NADH(P)-binding YPDSF_RS19485 PF00593 TonB dependent receptor YPDSF_RS19485 PF07715 TonB-dependent Receptor Plug Domain YPDSF_RS19490 PF05171 Haemin-degrading HemS YPDSF_RS19495 PF01497 Periplasmic binding protein YPDSF_RS19500 PF01032 FecCD transport family YPDSF_RS19505 PF00005 ABC transporter YPDSF_RS19510 PF01053 Cys/Met metabolism PLP-dependent enzyme YPDSF_RS19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS19520 PF03466 LysR substrate binding domain YPDSF_RS19525 PF01206 Sulfurtransferase TusA YPDSF_RS19530 PF04143 YPDSF_RS19530 YPDSF_RS19535 PF01312 FlhB HrpN YscU SpaS Family YPDSF_RS19540 PF01311 YPDSF_RS19540 YPDSF_RS19545 PF01313 YPDSF_RS19545 YPDSF_RS19550 PF00813 YPDSF_RS19550 YPDSF_RS19555 PF01052 Surface presentation of antigens (SPOA) YPDSF_RS19570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPDSF_RS19570 PF02874 ATP synthase alpha/beta family, beta-barrel domain YPDSF_RS19575 PF00771 FHIPEP family YPDSF_RS19580 PF06188 YPDSF_RS19580 YPDSF_RS19585 PF13327 YPDSF_RS19585 YPDSF_RS19590 PF01514 Secretory protein of YscJ/FliF family YPDSF_RS19600 PF06287 YPDSF_RS19600 YPDSF_RS19605 PF09392 Type III secretion needle MxiH like YPDSF_RS19610 PF12833 Helix-turn-helix domain YPDSF_RS19615 PF08988 Protein of unknown function (DUF1895) YPDSF_RS19620 PF16693 YPDSF_RS19620 YPDSF_RS19625 PF00263 YPDSF_RS19625 YPDSF_RS19625 PF03958 Bacterial type II/III secretion system short domain YPDSF_RS19630 PF00072 Response regulator receiver domain YPDSF_RS19630 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS19630 PF01627 Hpt domain YPDSF_RS19630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS19635 PF00072 Response regulator receiver domain YPDSF_RS19635 PF00196 Bacterial regulatory proteins, luxR family YPDSF_RS19640 PF00375 Sodium:dicarboxylate symporter family YPDSF_RS19645 PF00501 AMP-binding enzyme YPDSF_RS19645 PF13193 AMP-binding enzyme C-terminal domain YPDSF_RS19645 PF16177 YPDSF_RS19645 YPDSF_RS19650 PF04341 YPDSF_RS19650 YPDSF_RS19655 PF00474 Sodium:solute symporter family YPDSF_RS19660 PF12715 Abhydrolase family YPDSF_RS19665 PF00665 Integrase core domain YPDSF_RS19665 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS19670 PF01695 IstB-like ATP binding protein YPDSF_RS19675 PF13683 YPDSF_RS19675 YPDSF_RS19680 PF01527 Transposase YPDSF_RS19710 PF01808 AICARFT/IMPCHase bienzyme YPDSF_RS19710 PF02142 MGS-like domain YPDSF_RS19715 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YPDSF_RS19715 PF02843 Phosphoribosylglycinamide synthetase, C domain YPDSF_RS19715 PF02844 Phosphoribosylglycinamide synthetase, N domain YPDSF_RS19720 PF07356 YPDSF_RS19720 YPDSF_RS19725 PF00216 Bacterial DNA-binding protein YPDSF_RS19730 PF04222 Protein of unknown function (DUF416) YPDSF_RS19735 PF04493 Endonuclease V YPDSF_RS19740 PF01208 Uroporphyrinogen decarboxylase (URO-D) YPDSF_RS19750 PF00293 NUDIX domain YPDSF_RS19750 PF09297 NADH pyrophosphatase zinc ribbon domain YPDSF_RS19755 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YPDSF_RS19765 PF01964 ThiC family YPDSF_RS19765 PF13667 ThiC-associated domain YPDSF_RS19770 PF02581 Thiamine monophosphate synthase/TENI YPDSF_RS19775 PF00899 ThiF family YPDSF_RS19780 PF02597 ThiS family YPDSF_RS19800 PF00623 RNA polymerase Rpb1, domain 2 YPDSF_RS19800 PF04983 RNA polymerase Rpb1, domain 3 YPDSF_RS19800 PF04997 RNA polymerase Rpb1, domain 1 YPDSF_RS19800 PF04998 RNA polymerase Rpb1, domain 5 YPDSF_RS19800 PF05000 RNA polymerase Rpb1, domain 4 YPDSF_RS19805 PF00562 RNA polymerase Rpb2, domain 6 YPDSF_RS19805 PF04560 RNA polymerase Rpb2, domain 7 YPDSF_RS19805 PF04561 RNA polymerase Rpb2, domain 2 YPDSF_RS19805 PF04563 RNA polymerase beta subunit YPDSF_RS19805 PF04565 RNA polymerase Rpb2, domain 3 YPDSF_RS19805 PF10385 RNA polymerase beta subunit external 1 domain YPDSF_RS19810 PF00542 Ribosomal protein L7/L12 C-terminal domain YPDSF_RS19810 PF16320 YPDSF_RS19810 YPDSF_RS19815 PF00466 Ribosomal protein L10 YPDSF_RS19820 PF00687 Ribosomal protein L1p/L10e family YPDSF_RS19825 PF00298 Ribosomal protein L11, RNA binding domain YPDSF_RS19825 PF03946 Ribosomal protein L11, N-terminal domain YPDSF_RS19830 PF00467 KOW motif YPDSF_RS19830 PF02357 Transcription termination factor nusG YPDSF_RS19835 PF00584 SecE/Sec61-gamma subunits of protein translocation complex YPDSF_RS19840 PF00009 Elongation factor Tu GTP binding domain YPDSF_RS19840 PF03143 Elongation factor Tu C-terminal domain YPDSF_RS19840 PF03144 Elongation factor Tu domain 2 YPDSF_RS19865 PF01695 IstB-like ATP binding protein YPDSF_RS19870 PF01695 IstB-like ATP binding protein YPDSF_RS19875 PF00665 Integrase core domain YPDSF_RS19875 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS19880 PF12146 Putative lysophospholipase YPDSF_RS19885 PF00324 Amino acid permease YPDSF_RS19890 PF00221 Aromatic amino acid lyase YPDSF_RS19895 PF01175 Urocanase YPDSF_RS19900 PF00291 Pyridoxal-phosphate dependent enzyme YPDSF_RS19905 PF00156 Phosphoribosyl transferase domain YPDSF_RS19910 PF00892 EamA-like transporter family YPDSF_RS19915 PF13535 ATP-grasp domain YPDSF_RS19920 PF01497 Periplasmic binding protein YPDSF_RS19925 PF01032 FecCD transport family YPDSF_RS19930 PF01032 FecCD transport family YPDSF_RS19935 PF00005 ABC transporter YPDSF_RS19940 PF13310 YPDSF_RS19940 YPDSF_RS19950 PF01381 Helix-turn-helix YPDSF_RS19955 PF13737 YPDSF_RS19955 YPDSF_RS19965 PF04606 YPDSF_RS19965 YPDSF_RS19975 PF00589 Phage integrase family YPDSF_RS19975 PF13356 Domain of unknown function (DUF4102) YPDSF_RS19980 PF12833 Helix-turn-helix domain YPDSF_RS19980 PF13377 Periplasmic binding protein-like domain YPDSF_RS19985 PF02653 YPDSF_RS19985 YPDSF_RS19990 PF00005 ABC transporter YPDSF_RS19995 PF13407 Periplasmic binding protein domain YPDSF_RS20005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPDSF_RS20005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPDSF_RS20010 PF00419 Fimbrial protein YPDSF_RS20015 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YPDSF_RS20015 PF02753 Pili assembly chaperone PapD, C-terminal domain YPDSF_RS20030 PF00419 Fimbrial protein YPDSF_RS20035 PF01757 YPDSF_RS20035 YPDSF_RS20045 PF13518 Helix-turn-helix domain YPDSF_RS20050 PF00665 Integrase core domain YPDSF_RS20050 PF13276 YPDSF_RS20050 YPDSF_RS20055 PF02219 Methylenetetrahydrofolate reductase YPDSF_RS20060 PF00696 Amino acid kinase family YPDSF_RS20060 PF00742 Homoserine dehydrogenase YPDSF_RS20060 PF03447 Homoserine dehydrogenase, NAD binding domain YPDSF_RS20065 PF01053 Cys/Met metabolism PLP-dependent enzyme YPDSF_RS20070 PF01340 Met Apo-repressor, MetJ YPDSF_RS20080 PF05360 YPDSF_RS20080 YPDSF_RS20085 PF01197 Ribosomal protein L31 YPDSF_RS20090 PF00270 DEAD/DEAH box helicase YPDSF_RS20090 PF00271 Helicase conserved C-terminal domain YPDSF_RS20100 PF00356 Bacterial regulatory proteins, lacI family YPDSF_RS20100 PF13377 Periplasmic binding protein-like domain YPDSF_RS20105 PF05036 Sporulation related domain YPDSF_RS20110 PF00227 Proteasome subunit YPDSF_RS20115 PF00004 ATPase family associated with various cellular activities (AAA) YPDSF_RS20115 PF07724 AAA domain (Cdc48 subfamily) YPDSF_RS20115 PF10431 C-terminal, D2-small domain, of ClpB protein YPDSF_RS20120 PF01040 UbiA prenyltransferase family YPDSF_RS20125 PF03737 Demethylmenaquinone methyltransferase YPDSF_RS20130 PF14016 YPDSF_RS20130 YPDSF_RS20145 PF13437 HlyD family secretion protein YPDSF_RS20150 PF00005 ABC transporter YPDSF_RS20150 PF00664 ABC transporter transmembrane region YPDSF_RS20150 PF03412 Peptidase C39 family YPDSF_RS20155 PF01797 Transposase IS200 like YPDSF_RS20160 PF06005 Protein of unknown function (DUF904) YPDSF_RS20170 PF00230 Major intrinsic protein YPDSF_RS20175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YPDSF_RS20175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YPDSF_RS20180 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded YPDSF_RS20185 PF00175 Oxidoreductase NAD-binding domain YPDSF_RS20185 PF00970 Oxidoreductase FAD-binding domain YPDSF_RS20190 PF05656 YPDSF_RS20190 YPDSF_RS20195 PF07305 YPDSF_RS20195 YPDSF_RS20200 PF00121 Triosephosphate isomerase YPDSF_RS20205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YPDSF_RS20205 PF03466 LysR substrate binding domain YPDSF_RS20210 PF02585 GlcNAc-PI de-N-acetylase YPDSF_RS20215 PF03737 Demethylmenaquinone methyltransferase YPDSF_RS20225 PF13531 Bacterial extracellular solute-binding protein YPDSF_RS20230 PF13531 Bacterial extracellular solute-binding protein YPDSF_RS20235 PF00365 Phosphofructokinase YPDSF_RS20240 PF01545 Cation efflux family YPDSF_RS20240 PF16916 YPDSF_RS20240 YPDSF_RS20245 PF04754 YPDSF_RS20245 YPDSF_RS20250 PF07813 LTXXQ motif family protein YPDSF_RS20255 PF00072 Response regulator receiver domain YPDSF_RS20255 PF00486 Transcriptional regulatory protein, C terminal YPDSF_RS20260 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS20260 PF00672 HAMP domain YPDSF_RS20260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS20260 PF16527 YPDSF_RS20260 YPDSF_RS20265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YPDSF_RS20265 PF02805 Metal binding domain of Ada YPDSF_RS20265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YPDSF_RS20265 PF12833 Helix-turn-helix domain YPDSF_RS20270 PF00588 SpoU rRNA Methylase family YPDSF_RS20275 PF00132 Bacterial transferase hexapeptide (six repeats) YPDSF_RS20275 PF06426 Serine acetyltransferase, N-terminal YPDSF_RS20285 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YPDSF_RS20285 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YPDSF_RS20290 PF02556 Preprotein translocase subunit SecB YPDSF_RS20295 PF00462 Glutaredoxin YPDSF_RS20300 PF00581 Rhodanese-like domain YPDSF_RS20305 PF01676 Metalloenzyme superfamily YPDSF_RS20305 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YPDSF_RS20310 PF01551 Peptidase family M23 YPDSF_RS20320 PF00107 Zinc-binding dehydrogenase YPDSF_RS20320 PF08240 Alcohol dehydrogenase GroES-like domain YPDSF_RS20325 PF00155 Aminotransferase class I and II YPDSF_RS20330 PF01370 NAD dependent epimerase/dehydratase family YPDSF_RS20335 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YPDSF_RS20340 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YPDSF_RS20345 PF00534 Glycosyl transferases group 1 YPDSF_RS20345 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YPDSF_RS20350 PF00535 Glycosyl transferase family 2 YPDSF_RS20355 PF01467 Cytidylyltransferase YPDSF_RS20360 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YPDSF_RS20360 PF06827 Zinc finger found in FPG and IleRS YPDSF_RS20360 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YPDSF_RS20365 PF00471 Ribosomal protein L33 YPDSF_RS20370 PF00830 Ribosomal L28 family YPDSF_RS20375 PF04002 RadC-like JAB domain YPDSF_RS20380 PF02441 Flavoprotein YPDSF_RS20380 PF04127 DNA / pantothenate metabolism flavoprotein YPDSF_RS20385 PF00692 dUTPase YPDSF_RS20390 PF00440 Bacterial regulatory proteins, tetR family YPDSF_RS20395 PF00156 Phosphoribosyl transferase domain YPDSF_RS20400 PF01138 3' exoribonuclease family, domain 1 YPDSF_RS20400 PF03725 3' exoribonuclease family, domain 2 YPDSF_RS20405 PF03755 YPDSF_RS20405 YPDSF_RS20405 PF08340 YPDSF_RS20405 YPDSF_RS20410 PF03458 YPDSF_RS20410 YPDSF_RS20415 PF01653 NAD-dependent DNA ligase adenylation domain YPDSF_RS20415 PF03120 NAD-dependent DNA ligase OB-fold domain YPDSF_RS20420 PF00625 Guanylate kinase YPDSF_RS20425 PF01192 RNA polymerase Rpb6 YPDSF_RS20430 PF02824 TGS domain YPDSF_RS20430 PF04607 Region found in RelA / SpoT proteins YPDSF_RS20430 PF13291 ACT domain YPDSF_RS20430 PF13328 HD domain YPDSF_RS20435 PF00588 SpoU rRNA Methylase family YPDSF_RS20435 PF12105 SpoU, rRNA methylase, C-terminal YPDSF_RS20440 PF00270 DEAD/DEAH box helicase YPDSF_RS20440 PF00271 Helicase conserved C-terminal domain YPDSF_RS20440 PF17191 YPDSF_RS20440 YPDSF_RS20445 PF03616 YPDSF_RS20445 YPDSF_RS20450 PF00860 Permease family YPDSF_RS20460 PF00583 Acetyltransferase (GNAT) family YPDSF_RS20460 PF09500 Putative thioesterase (yiiD_Cterm) YPDSF_RS20465 PF00665 Integrase core domain YPDSF_RS20465 PF02796 Helix-turn-helix domain of resolvase YPDSF_RS20470 PF01695 IstB-like ATP binding protein YPDSF_RS20475 PF02580 D-Tyr-tRNA(Tyr) deacylase YPDSF_RS20480 PF03631 YPDSF_RS20480 YPDSF_RS20485 PF13419 Haloacid dehalogenase-like hydrolase YPDSF_RS20490 PF00009 Elongation factor Tu GTP binding domain YPDSF_RS20490 PF00679 Elongation factor G C-terminus YPDSF_RS20490 PF03144 Elongation factor Tu domain 2 YPDSF_RS20500 PF00120 Glutamine synthetase, catalytic domain YPDSF_RS20500 PF03951 Glutamine synthetase, beta-Grasp domain YPDSF_RS20505 PF00512 His Kinase A (phospho-acceptor) domain YPDSF_RS20505 PF00989 PAS fold YPDSF_RS20505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YPDSF_RS20510 PF00072 Response regulator receiver domain YPDSF_RS20510 PF00158 Sigma-54 interaction domain YPDSF_RS20510 PF02954 Bacterial regulatory protein, Fis family YPDSF_RS20515 PF04055 Radical SAM superfamily YPDSF_RS20515 PF06969 HemN C-terminal domain YPDSF_RS20520 PF04220 YPDSF_RS20520 YPDSF_RS20525 PF01926 50S ribosome-binding GTPase YPDSF_RS20530 PF00476 DNA polymerase family A YPDSF_RS20530 PF01367 5'-3' exonuclease, C-terminal SAM fold YPDSF_RS20530 PF01612 3'-5' exonuclease YPDSF_RS20530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YPDSF_RS20535 PF01323 DSBA-like thioredoxin domain YPDSF_RS20540 PF01636 Phosphotransferase enzyme family YPDSF_RS20545 PF06288 Protein of unknown function (DUF1040) YPDSF_RS20550 PF12804 MobA-like NTP transferase domain YPDSF_RS20555 PF03205 Molybdopterin guanine dinucleotide synthesis protein B YPDSF_RS20560 PF00872 YPDSF_RS20560 YPDSF_RS20590 PF00392 Bacterial regulatory proteins, gntR family YPDSF_RS20590 PF07729 FCD domain YPDSF_RS20595 PF07690 Major Facilitator Superfamily YPDSF_RS20610 PF05025 RbsD / FucU transport protein family YPDSF_RS20615 PF02705 YPDSF_RS20615 YPDSF_RS20620 PF07728 AAA domain (dynein-related subfamily) YPDSF_RS20620 PF12592 Protein of unknown function (DUF3763) YPDSF_RS20625 PF05762 VWA domain containing CoxE-like protein YPDSF_RS20630 PF03590 Aspartate-ammonia ligase YPDSF_RS20635 PF01037 AsnC family YPDSF_RS20635 PF13412 Winged helix-turn-helix DNA-binding YPDSF_RS20640 PF00258 Flavodoxin YPDSF_RS20645 PF01134 Glucose inhibited division protein A YPDSF_RS20645 PF13932 GidA associated domain 3 YPDSF_RS20650 PF02527 rRNA small subunit methyltransferase G YPDSF_RS20655 PF03899 YPDSF_RS20655 YPDSF_RS20660 PF00119 ATP synthase A chain YPDSF_RS20665 PF00137 ATP synthase subunit C YPDSF_RS20670 PF00430 ATP synthase B/B' CF(0) YPDSF_RS20675 PF00213 ATP synthase delta (OSCP) subunit YPDSF_RS20680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPDSF_RS20680 PF00306 ATP synthase alpha/beta chain, C terminal domain YPDSF_RS20680 PF02874 ATP synthase alpha/beta family, beta-barrel domain YPDSF_RS20685 PF00231 ATP synthase YPDSF_RS20690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YPDSF_RS20690 PF02874 ATP synthase alpha/beta family, beta-barrel domain YPDSF_RS20695 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain YPDSF_RS20695 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain YPDSF_RS20700 PF00132 Bacterial transferase hexapeptide (six repeats) YPDSF_RS20700 PF12804 MobA-like NTP transferase domain YPDSF_RS20705 PF01380 SIS domain YPDSF_RS20705 PF13522 Glutamine amidotransferase domain YPDSF_RS20710 PF12849 PBP superfamily domain YPDSF_RS20715 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS20720 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS20725 PF00005 ABC transporter YPDSF_RS20730 PF01895 PhoU domain YPDSF_RS20735 PF04519 YPDSF_RS20735 YPDSF_RS20740 PF00497 Bacterial extracellular solute-binding proteins, family 3 YPDSF_RS20745 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS20750 PF00528 Binding-protein-dependent transport system inner membrane component YPDSF_RS20755 PF13419 Haloacid dehalogenase-like hydrolase YPDSF_RS20760 PF00860 Permease family YPDSF_RS20775 PF07055 Enoyl reductase FAD binding domain YPDSF_RS20775 PF12241 Trans-2-enoyl-CoA reductase catalytic region YPDSF_RS20775 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase YPDSF_RS20780 PF01926 50S ribosome-binding GTPase YPDSF_RS20780 PF10396 GTP-binding protein TrmE N-terminus YPDSF_RS20780 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE YPDSF_RS20785 PF02096 60Kd inner membrane protein YPDSF_RS20785 PF14849 YidC periplasmic domain YPDSF_RS20790 PF00825 Ribonuclease P YPDSF_RS20795 PF00468 Ribosomal protein L34 YPDSF_RS20905 PF02423 Ornithine cyclodeaminase/mu-crystallin family YPDSF_RS21390 PF00128 Alpha amylase, catalytic domain YPDSF_RS21525 PF16591 YPDSF_RS21525 YPDSF_RS21880 PF13241 Putative NAD(P)-binding YPDSF_RS21885 PF01226 Formate/nitrite transporter YPDSF_RS22070 PF10636 Hemin uptake protein hemP