locus-tag class description S96127_RS00025 PF07201 HrpJ-like domain S96127_RS00030 PF09059 TyeA S96127_RS00040 PF09474 Type III secretion system YscX (type_III_YscX) S96127_RS00050 PF00771 FHIPEP family S96127_RS00055 PF09621 Type III secretion system regulator (LcrR) S96127_RS00060 PF07216 LcrG protein S96127_RS00065 PF04792 V antigen (LcrV) protein S96127_RS00070 PF07720 Tetratricopeptide repeat S96127_RS00075 PF04888 Secretion system effector C (SseC) like family S96127_RS00080 PF05844 YopD protein S96127_RS00100 PF12468 Type III secretion system leucine rich repeat protein S96127_RS00110 PF00872 Transposase, Mutator family S96127_RS00130 PF05932 Tir chaperone protein (CesT) family S96127_RS00135 PF03543 Yersinia/Haemophilus virulence surface antigen S96127_RS00150 PF05818 Enterobacterial TraT complement resistance protein S96127_RS00160 PF13614 AAA domain S96127_RS00165 PF18090 Centromere-binding protein HTH domain S96127_RS00165 PF02195 ParB-like nuclease domain S96127_RS00185 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH S96127_RS00195 PF09020 YopE, N terminal S96127_RS00195 PF03545 Yersinia virulence determinant (YopE) S96127_RS00200 PF05932 Tir chaperone protein (CesT) family S96127_RS00210 PF00665 Integrase core domain S96127_RS00240 PF02796 Helix-turn-helix domain of resolvase S96127_RS00240 PF00239 Resolvase, N terminal domain S96127_RS00245 PF13700 Domain of unknown function (DUF4158) S96127_RS00245 PF01526 Tn3 transposase DDE domain S96127_RS00270 PF08751 TrwC relaxase S96127_RS00270 PF18340 DNA relaxase TraI 2B/2B-like domain S96127_RS00270 PF07057 DNA helicase TraI S96127_RS00270 PF18272 single-stranded DNA binding TraI N-terminal subdomain S96127_RS00295 PF10723 Replication regulatory protein RepB S96127_RS00305 PF02387 IncFII RepA protein family S96127_RS00325 PF00069 Protein kinase domain S96127_RS00325 PF09632 Rac1-binding domain S96127_RS00330 PF03421 YopJ Serine/Threonine acetyltransferase S96127_RS00345 PF09013 YopH, N-terminal S96127_RS00345 PF00102 Protein-tyrosine phosphatase S96127_RS00360 PF09013 YopH, N-terminal S96127_RS00365 PF02108 Flagellar assembly protein FliH S96127_RS00370 PF06578 YOP proteins translocation protein K (YscK) S96127_RS00375 PF01514 Secretory protein of YscJ/FliF family S96127_RS00380 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI S96127_RS00385 PF09025 YopR, type III needle-polymerisation regulator S96127_RS00390 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) S96127_RS00395 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF S96127_RS00400 PF08988 Type III secretion system, cytoplasmic E component of needle S96127_RS00405 PF16693 Inner membrane component of T3SS, periplasmic domain S96127_RS00405 PF16697 Inner membrane component of T3SS, cytoplasmic domain S96127_RS00410 PF03958 Bacterial type II/III secretion system short domain S96127_RS00410 PF00263 Bacterial type II and III secretion system protein S96127_RS00415 PF05932 Tir chaperone protein (CesT) family S96127_RS00420 PF17551 Family of unknown function (DUF5463) S96127_RS00425 PF02311 AraC-like ligand binding domain S96127_RS00425 PF12833 Helix-turn-helix domain S96127_RS00430 PF09619 Type III secretion system lipoprotein chaperone (YscW) S96127_RS00435 PF01312 FlhB HrpN YscU SpaS Family S96127_RS00440 PF01311 Bacterial export proteins, family 1 S96127_RS00445 PF01313 Bacterial export proteins, family 3 S96127_RS00450 PF00813 FliP family S96127_RS00490 PF03335 Phage tail fibre repeat S96127_RS00490 PF07484 Phage Tail Collar Domain S96127_RS00490 PF03335 Phage tail fibre repeat S96127_RS00490 PF08400 Prophage tail fibre N-terminal S96127_RS00490 PF08400 Prophage tail fibre N-terminal S96127_RS00490 PF07484 Phage Tail Collar Domain S96127_RS00495 PF02413 Caudovirales tail fibre assembly protein, lambda gpK S96127_RS00500 PF01695 IstB-like ATP binding protein S96127_RS00505 PF02796 Helix-turn-helix domain of resolvase S96127_RS00505 PF00665 Integrase core domain S96127_RS00530 PF00872 Transposase, Mutator family S96127_RS00535 PF01548 Transposase S96127_RS00535 PF02371 Transposase IS116/IS110/IS902 family S96127_RS00555 PF13091 PLD-like domain S96127_RS00565 PF04754 Putative transposase, YhgA-like S96127_RS00570 PF02796 Helix-turn-helix domain of resolvase S96127_RS00570 PF00239 Resolvase, N terminal domain S96127_RS00585 PF13614 AAA domain S96127_RS00585 PF18607 ParA helix turn helix domain S96127_RS00590 PF08775 ParB family S96127_RS00590 PF02195 ParB-like nuclease domain S96127_RS00610 PF01555 DNA methylase S96127_RS00620 PF07128 Protein of unknown function (DUF1380) S96127_RS00635 PF06006 Bacterial protein of unknown function (DUF905) S96127_RS00640 PF02195 ParB-like nuclease domain S96127_RS00645 PF00665 Integrase core domain S96127_RS00645 PF02796 Helix-turn-helix domain of resolvase S96127_RS00650 PF01695 IstB-like ATP binding protein S96127_RS00675 PF06445 GyrI-like small molecule binding domain S96127_RS00675 PF12833 Helix-turn-helix domain S96127_RS00680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS00680 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS00685 PF00577 Outer membrane usher protein S96127_RS00685 PF13953 PapC C-terminal domain S96127_RS00685 PF13954 PapC N-terminal domain S96127_RS00690 PF09255 Caf1 Capsule antigen S96127_RS00710 PF06213 Cobalamin biosynthesis protein CobT S96127_RS00710 PF11775 Cobalamin biosynthesis protein CobT VWA domain S96127_RS00720 PF07733 Bacterial DNA polymerase III alpha NTPase domain S96127_RS00720 PF02811 PHP domain S96127_RS00720 PF14579 Helix-hairpin-helix motif S96127_RS00720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain S96127_RS00750 PF01367 5'-3' exonuclease, C-terminal SAM fold S96127_RS00750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain S96127_RS00805 PF01051 Initiator Replication protein S96127_RS00880 PF00271 Helicase conserved C-terminal domain S96127_RS00880 PF17191 RecG wedge domain S96127_RS00880 PF00270 DEAD/DEAH box helicase S96127_RS00885 PF17762 HTH domain found in ParB protein S96127_RS00885 PF02195 ParB-like nuclease domain S96127_RS00890 PF17762 HTH domain found in ParB protein S96127_RS00890 PF02195 ParB-like nuclease domain S96127_RS00895 PF00664 ABC transporter transmembrane region S96127_RS00895 PF03412 Peptidase C39 family S96127_RS00895 PF00005 ABC transporter S96127_RS00995 PF01278 Omptin family S96127_RS01015 PF01815 Rop protein S96127_RS01020 PF01695 IstB-like ATP binding protein S96127_RS01025 PF02796 Helix-turn-helix domain of resolvase S96127_RS01025 PF00665 Integrase core domain S96127_RS01050 PF02796 Helix-turn-helix domain of resolvase S96127_RS01050 PF00239 Resolvase, N terminal domain S96127_RS01055 PF06381 Protein of unknown function (DUF1073) S96127_RS01060 PF04233 Phage Mu protein F like protein S96127_RS01155 PF08400 Prophage tail fibre N-terminal S96127_RS01155 PF03335 Phage tail fibre repeat S96127_RS01155 PF07484 Phage Tail Collar Domain S96127_RS01160 PF02413 Caudovirales tail fibre assembly protein, lambda gpK S96127_RS01165 PF01757 Acyltransferase family S96127_RS01215 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system S96127_RS01220 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system S96127_RS01255 PF00308 Bacterial dnaA protein S96127_RS01255 PF11638 DnaA N-terminal domain S96127_RS01255 PF08299 Bacterial dnaA protein helix-turn-helix S96127_RS01260 PF02767 DNA polymerase III beta subunit, central domain S96127_RS01260 PF02768 DNA polymerase III beta subunit, C-terminal domain S96127_RS01260 PF00712 DNA polymerase III beta subunit, N-terminal domain S96127_RS01270 PF02463 RecF/RecN/SMC N terminal domain S96127_RS01275 PF00204 DNA gyrase B S96127_RS01275 PF18053 DNA gyrase B subunit insert domain S96127_RS01275 PF00986 DNA gyrase B subunit, carboxyl terminus S96127_RS01275 PF01751 Toprim domain S96127_RS01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS01290 PF00311 Phosphoenolpyruvate carboxylase S96127_RS01295 PF01546 Peptidase family M20/M25/M40 S96127_RS01295 PF07687 Peptidase dimerisation domain S96127_RS01300 PF01118 Semialdehyde dehydrogenase, NAD binding domain S96127_RS01300 PF02774 Semialdehyde dehydrogenase, dimerisation domain S96127_RS01305 PF00696 Amino acid kinase family S96127_RS01310 PF14698 Argininosuccinate lyase C-terminal S96127_RS01310 PF00206 Lyase S96127_RS01315 PF07715 TonB-dependent Receptor Plug Domain S96127_RS01315 PF00593 TonB dependent receptor S96127_RS01325 PF00664 ABC transporter transmembrane region S96127_RS01325 PF00005 ABC transporter S96127_RS01330 PF00529 HlyD membrane-fusion protein of T1SS S96127_RS01335 PF03544 Gram-negative bacterial TonB protein C-terminal S96127_RS01340 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS01340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain S96127_RS01345 PF08534 Redoxin S96127_RS01345 PF00462 Glutaredoxin S96127_RS01350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS01350 PF03466 LysR substrate binding domain S96127_RS01355 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS01355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain S96127_RS01360 PF00440 Bacterial regulatory proteins, tetR family S96127_RS01365 PF07226 Protein of unknown function (DUF1422) S96127_RS01370 PF05958 tRNA (Uracil-5-)-methyltransferase S96127_RS01375 PF07715 TonB-dependent Receptor Plug Domain S96127_RS01375 PF00593 TonB dependent receptor S96127_RS01380 PF01177 Asp/Glu/Hydantoin racemase S96127_RS01415 PF13407 Periplasmic binding protein domain S96127_RS01420 PF00005 ABC transporter S96127_RS01425 PF02653 Branched-chain amino acid transport system / permease component S96127_RS01430 PF02653 Branched-chain amino acid transport system / permease component S96127_RS01435 PF03466 LysR substrate binding domain S96127_RS01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS01440 PF04219 Protein of unknown function, DUF S96127_RS01445 PF01078 Magnesium chelatase, subunit ChlI S96127_RS01445 PF13335 Magnesium chelatase, subunit ChlI C-terminal S96127_RS01450 PF08046 IlvGEDA operon leader peptide S96127_RS01455 PF00205 Thiamine pyrophosphate enzyme, central domain S96127_RS01455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain S96127_RS01455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain S96127_RS01465 PF01063 Amino-transferase class IV S96127_RS01470 PF00920 Dehydratase family S96127_RS01475 PF00291 Pyridoxal-phosphate dependent enzyme S96127_RS01475 PF00585 C-terminal regulatory domain of Threonine dehydratase S96127_RS01510 PF03466 LysR substrate binding domain S96127_RS01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS01515 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain S96127_RS01515 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain S96127_RS01540 PF01320 Colicin immunity protein / pyocin immunity protein S96127_RS01545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS01545 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS01555 PF00577 Outer membrane usher protein S96127_RS01555 PF13954 PapC N-terminal domain S96127_RS01555 PF13953 PapC C-terminal domain S96127_RS01560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS01560 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS01570 PF00872 Transposase, Mutator family S96127_RS01590 PF00580 UvrD/REP helicase N-terminal domain S96127_RS01590 PF13361 UvrD-like helicase C-terminal domain S96127_RS01600 PF00271 Helicase conserved C-terminal domain S96127_RS01600 PF00270 DEAD/DEAH box helicase S96127_RS01605 PF00085 Thioredoxin S96127_RS01610 PF07497 Rho termination factor, RNA-binding domain S96127_RS01610 PF07498 Rho termination factor, N-terminal domain S96127_RS01610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain S96127_RS01615 PF00953 Glycosyl transferase family 4 S96127_RS01620 PF02706 Chain length determinant protein S96127_RS01625 PF02350 UDP-N-acetylglucosamine 2-epimerase S96127_RS01630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain S96127_RS01630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain S96127_RS01630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain S96127_RS01635 PF16363 GDP-mannose 4,6 dehydratase S96127_RS01640 PF00483 Nucleotidyl transferase S96127_RS01650 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family S96127_RS01655 PF01943 Polysaccharide biosynthesis protein S96127_RS01660 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 S96127_RS01665 PF06899 WzyE protein, O-antigen assembly polymerase S96127_RS01670 PF03808 Glycosyl transferase WecB/TagA/CpsF family S96127_RS01675 PF00324 Amino acid permease S96127_RS01705 PF07719 Tetratricopeptide repeat S96127_RS01705 PF07219 HemY protein N-terminus S96127_RS01710 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase S96127_RS01715 PF02602 Uroporphyrinogen-III synthase HemD S96127_RS01720 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain S96127_RS01720 PF03900 Porphobilinogen deaminase, C-terminal domain S96127_RS01730 PF12633 Adenylate cyclase NT domain S96127_RS01730 PF01295 Adenylate cyclase, class-I S96127_RS01735 PF01491 Frataxin-like domain S96127_RS01740 PF13627 Prokaryotic lipoprotein-attachment site S96127_RS01745 PF01678 Diaminopimelate epimerase S96127_RS01750 PF04340 Protein of unknown function, DUF484 S96127_RS01755 PF02899 Phage integrase, N-terminal SAM-like domain S96127_RS01755 PF00589 Phage integrase family S96127_RS01760 PF13419 Haloacid dehalogenase-like hydrolase S96127_RS01765 PF00580 UvrD/REP helicase N-terminal domain S96127_RS01765 PF13361 UvrD-like helicase C-terminal domain S96127_RS01780 PF09370 Phosphoenolpyruvate hydrolase-like S96127_RS01785 PF01544 CorA-like Mg2+ transporter protein S96127_RS01790 PF00892 EamA-like transporter family S96127_RS01795 PF03061 Thioesterase superfamily S96127_RS01800 PF02253 Phospholipase A1 S96127_RS01805 PF16124 RecQ zinc-binding S96127_RS01805 PF09382 RQC domain S96127_RS01805 PF00570 HRDC domain S96127_RS01805 PF00271 Helicase conserved C-terminal domain S96127_RS01805 PF00270 DEAD/DEAH box helicase S96127_RS01810 PF01810 LysE type translocator S96127_RS01815 PF01810 LysE type translocator S96127_RS01820 PF12146 Serine aminopeptidase, S33 S96127_RS01835 PF03009 Glycerophosphoryl diester phosphodiesterase family S96127_RS01840 PF04324 BFD-like [2Fe-2S] binding domain S96127_RS01840 PF01266 FAD dependent oxidoreductase S96127_RS01845 PF00890 FAD binding domain S96127_RS01850 PF02754 Cysteine-rich domain S96127_RS01850 PF13183 4Fe-4S dicluster domain S96127_RS01855 PF08786 DcrB S96127_RS01860 PF02592 Putative vitamin uptake transporter S96127_RS01865 PF01206 Sulfurtransferase TusA S96127_RS01870 PF00403 Heavy-metal-associated domain S96127_RS01875 PF07947 YhhN family S96127_RS01890 PF06611 Protein of unknown function (DUF1145) S96127_RS01900 PF02881 SRP54-type protein, helical bundle domain S96127_RS01900 PF02881 SRP54-type protein, helical bundle domain S96127_RS01900 PF00448 SRP54-type protein, GTPase domain S96127_RS01900 PF00448 SRP54-type protein, GTPase domain S96127_RS01905 PF00005 ABC transporter S96127_RS01910 PF02687 FtsX-like permease family S96127_RS01910 PF18075 FtsX extracellular domain S96127_RS01915 PF04545 Sigma-70, region 4 S96127_RS01915 PF00140 Sigma-70 factor, region 1.2 S96127_RS01915 PF04542 Sigma-70 region 2 S96127_RS01920 PF01797 Transposase IS200 like S96127_RS01925 PF12568 Acetyltransferase (GNAT) domain, PanZ S96127_RS01930 PF13458 Periplasmic binding protein S96127_RS01935 PF02653 Branched-chain amino acid transport system / permease component S96127_RS01940 PF11862 Domain of unknown function (DUF3382) S96127_RS01940 PF02653 Branched-chain amino acid transport system / permease component S96127_RS01945 PF00005 ABC transporter S96127_RS01945 PF12399 Branched-chain amino acid ATP-binding cassette transporter S96127_RS01950 PF00005 ABC transporter S96127_RS01990 PF13416 Bacterial extracellular solute-binding protein S96127_RS01995 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS02000 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS02005 PF00005 ABC transporter S96127_RS02005 PF17912 MalK OB fold domain S96127_RS02010 PF03009 Glycerophosphoryl diester phosphodiesterase family S96127_RS02015 PF03547 Membrane transport protein S96127_RS02020 PF00892 EamA-like transporter family S96127_RS02025 PF03466 LysR substrate binding domain S96127_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS02030 PF08267 Cobalamin-independent synthase, N-terminal domain S96127_RS02030 PF01717 Cobalamin-independent synthase, Catalytic domain S96127_RS02035 PF01738 Dienelactone hydrolase family S96127_RS02040 PF01048 Phosphorylase superfamily S96127_RS02050 PF02554 Carbon starvation protein CstA S96127_RS02050 PF13722 5TM C-terminal transporter carbon starvation CstA S96127_RS02055 PF09335 SNARE associated Golgi protein S96127_RS02060 PF02646 RmuC family S96127_RS02065 PF01209 ubiE/COQ5 methyltransferase family S96127_RS02070 PF02036 SCP-2 sterol transfer family S96127_RS02075 PF03109 ABC1 family S96127_RS02080 PF02416 mttA/Hcf106 family S96127_RS02090 PF00902 Sec-independent protein translocase protein (TatC) S96127_RS02100 PF00665 Integrase core domain S96127_RS02100 PF02796 Helix-turn-helix domain of resolvase S96127_RS02105 PF01695 IstB-like ATP binding protein S96127_RS02110 PF01026 TatD related DNase S96127_RS02115 PF00490 Delta-aminolevulinic acid dehydratase S96127_RS02120 PF02357 Transcription termination factor nusG S96127_RS02125 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase S96127_RS02130 PF00970 Oxidoreductase FAD-binding domain S96127_RS02130 PF00175 Oxidoreductase NAD-binding domain S96127_RS02135 PF00108 Thiolase, N-terminal domain S96127_RS02135 PF02803 Thiolase, C-terminal domain S96127_RS02140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain S96127_RS02140 PF00378 Enoyl-CoA hydratase/isomerase S96127_RS02140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain S96127_RS02145 PF00557 Metallopeptidase family M24 S96127_RS02150 PF09186 Domain of unknown function (DUF1949) S96127_RS02150 PF01205 Uncharacterized protein family UPF0029 S96127_RS02165 PF02386 Cation transport protein S96127_RS02170 PF12724 Flavodoxin domain S96127_RS02200 PF01565 FAD binding domain S96127_RS02200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain S96127_RS02205 PF02237 Biotin protein ligase C terminal domain S96127_RS02205 PF08279 HTH domain S96127_RS02205 PF03099 Biotin/lipoate A/B protein ligase family S96127_RS02210 PF00485 Phosphoribulokinase / Uridine kinase family S96127_RS02215 PF13673 Acetyltransferase (GNAT) domain S96127_RS02220 PF00665 Integrase core domain S96127_RS02220 PF02796 Helix-turn-helix domain of resolvase S96127_RS02225 PF01695 IstB-like ATP binding protein S96127_RS02250 PF03144 Elongation factor Tu domain 2 S96127_RS02250 PF03143 Elongation factor Tu C-terminal domain S96127_RS02250 PF00009 Elongation factor Tu GTP binding domain S96127_RS02255 PF00584 SecE/Sec61-gamma subunits of protein translocation complex S96127_RS02260 PF02357 Transcription termination factor nusG S96127_RS02260 PF00467 KOW motif S96127_RS02265 PF00298 Ribosomal protein L11, RNA binding domain S96127_RS02265 PF03946 Ribosomal protein L11, N-terminal domain S96127_RS02270 PF00687 Ribosomal protein L1p/L10e family S96127_RS02275 PF00466 Ribosomal protein L10 S96127_RS02280 PF00542 Ribosomal protein L7/L12 C-terminal domain S96127_RS02280 PF16320 Ribosomal protein L7/L12 dimerisation domain S96127_RS02285 PF04560 RNA polymerase Rpb2, domain 7 S96127_RS02285 PF00562 RNA polymerase Rpb2, domain 6 S96127_RS02285 PF10385 RNA polymerase beta subunit external 1 domain S96127_RS02285 PF04565 RNA polymerase Rpb2, domain 3 S96127_RS02285 PF04561 RNA polymerase Rpb2, domain 2 S96127_RS02285 PF04563 RNA polymerase beta subunit S96127_RS02290 PF05000 RNA polymerase Rpb1, domain 4 S96127_RS02290 PF00623 RNA polymerase Rpb1, domain 2 S96127_RS02290 PF04997 RNA polymerase Rpb1, domain 1 S96127_RS02290 PF04998 RNA polymerase Rpb1, domain 5 S96127_RS02290 PF04983 RNA polymerase Rpb1, domain 3 S96127_RS02295 PF01797 Transposase IS200 like S96127_RS02300 PF06968 Biotin and Thiamin Synthesis associated domain S96127_RS02300 PF04055 Radical SAM superfamily S96127_RS02305 PF05690 Thiazole biosynthesis protein ThiG S96127_RS02315 PF00899 ThiF family S96127_RS02320 PF02581 Thiamine monophosphate synthase S96127_RS02325 PF01964 Radical SAM ThiC family S96127_RS02325 PF13667 ThiC-associated domain S96127_RS02330 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ S96127_RS02335 PF00293 NUDIX domain S96127_RS02335 PF09297 NADH pyrophosphatase zinc ribbon domain S96127_RS02345 PF01208 Uroporphyrinogen decarboxylase (URO-D) S96127_RS02350 PF04493 Endonuclease V S96127_RS02355 PF04222 Protein of unknown function (DUF416) S96127_RS02360 PF00216 Bacterial DNA-binding protein S96127_RS02365 PF07356 Protein of unknown function (DUF1481) S96127_RS02370 PF02844 Phosphoribosylglycinamide synthetase, N domain S96127_RS02370 PF02843 Phosphoribosylglycinamide synthetase, C domain S96127_RS02370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain S96127_RS02375 PF01808 AICARFT/IMPCHase bienzyme S96127_RS02375 PF02142 MGS-like domain S96127_RS02410 PF01695 IstB-like ATP binding protein S96127_RS02415 PF00665 Integrase core domain S96127_RS02415 PF02796 Helix-turn-helix domain of resolvase S96127_RS02425 PF00474 Sodium:solute symporter family S96127_RS02430 PF04341 Protein of unknown function, DUF485 S96127_RS02435 PF16177 Acetyl-coenzyme A synthetase N-terminus S96127_RS02435 PF00501 AMP-binding enzyme S96127_RS02435 PF13193 AMP-binding enzyme C-terminal domain S96127_RS02440 PF00375 Sodium:dicarboxylate symporter family S96127_RS02445 PF00196 Bacterial regulatory proteins, luxR family S96127_RS02445 PF00072 Response regulator receiver domain S96127_RS02450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) S96127_RS02450 PF00072 Response regulator receiver domain S96127_RS02450 PF01627 Hpt domain S96127_RS02450 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS02450 PF00672 HAMP domain S96127_RS02455 PF00263 Bacterial type II and III secretion system protein S96127_RS02455 PF03958 Bacterial type II/III secretion system short domain S96127_RS02490 PF01514 Secretory protein of YscJ/FliF family S96127_RS02510 PF18269 T3SS EscN ATPase C-terminal domain S96127_RS02510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain S96127_RS02525 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term S96127_RS02530 PF00813 FliP family S96127_RS02535 PF01313 Bacterial export proteins, family 3 S96127_RS02540 PF01311 Bacterial export proteins, family 1 S96127_RS02545 PF01312 FlhB HrpN YscU SpaS Family S96127_RS02550 PF04143 Sulphur transport S96127_RS02555 PF01206 Sulfurtransferase TusA S96127_RS02560 PF03466 LysR substrate binding domain S96127_RS02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS02565 PF03222 Tryptophan/tyrosine permease family S96127_RS02570 PF01053 Cys/Met metabolism PLP-dependent enzyme S96127_RS02575 PF00005 ABC transporter S96127_RS02580 PF01032 FecCD transport family S96127_RS02585 PF01497 Periplasmic binding protein S96127_RS02590 PF05171 Haemin-degrading HemS.ChuX domain S96127_RS02595 PF07715 TonB-dependent Receptor Plug Domain S96127_RS02595 PF00593 TonB dependent receptor S96127_RS02605 PF13460 NAD(P)H-binding S96127_RS02610 PF06228 Haem utilisation ChuX/HutX S96127_RS02615 PF04055 Radical SAM superfamily S96127_RS02635 PF15608 PELOTA RNA binding domain S96127_RS02635 PF11202 Phosphoribosyl transferase (PRTase) S96127_RS02655 PF02342 TerD domain S96127_RS02660 PF02342 TerD domain S96127_RS02665 PF05099 Tellurite resistance protein TerB S96127_RS02670 PF03741 Integral membrane protein TerC family S96127_RS02675 PF02342 TerD domain S96127_RS02680 PF02342 TerD domain S96127_RS02690 PF13953 PapC C-terminal domain S96127_RS02690 PF00577 Outer membrane usher protein S96127_RS02690 PF13954 PapC N-terminal domain S96127_RS02695 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS02710 PF01565 FAD binding domain S96127_RS02710 PF08031 Berberine and berberine like S96127_RS02715 PF12951 Passenger-associated-transport-repeat S96127_RS02720 PF04345 Chorismate lyase S96127_RS02725 PF01040 UbiA prenyltransferase family S96127_RS02730 PF01553 Acyltransferase S96127_RS02735 PF01219 Prokaryotic diacylglycerol kinase S96127_RS02740 PF00717 Peptidase S24-like S96127_RS02740 PF01726 LexA DNA binding domain S96127_RS02745 PF01475 Ferric uptake regulator family S96127_RS02750 PF01207 Dihydrouridine synthase (Dus) S96127_RS02755 PF09583 Phage shock protein G (Phageshock_PspG) S96127_RS02760 PF08240 Alcohol dehydrogenase GroES-like domain S96127_RS02760 PF00107 Zinc-binding dehydrogenase S96127_RS02765 PF00772 DnaB-like helicase N terminal domain S96127_RS02765 PF03796 DnaB-like helicase C terminal domain S96127_RS02770 PF01168 Alanine racemase, N-terminal domain S96127_RS02770 PF00842 Alanine racemase, C-terminal domain S96127_RS02775 PF00155 Aminotransferase class I and II S96127_RS02780 PF04237 YjbR S96127_RS02785 PF17755 UvrA DNA-binding domain S96127_RS02785 PF00005 ABC transporter S96127_RS02785 PF17760 UvrA interaction domain S96127_RS02790 PF00436 Single-strand binding protein family S96127_RS02795 PF05336 L-rhamnose mutarotase S96127_RS02800 PF00465 Iron-containing alcohol dehydrogenase S96127_RS02805 PF00596 Class II Aldolase and Adducin N-terminal domain S96127_RS02810 PF06134 L-rhamnose isomerase (RhaA) S96127_RS02815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain S96127_RS02815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain S96127_RS02825 PF02311 AraC-like ligand binding domain S96127_RS02825 PF12833 Helix-turn-helix domain S96127_RS02830 PF12833 Helix-turn-helix domain S96127_RS02830 PF02311 AraC-like ligand binding domain S96127_RS02835 PF06379 L-rhamnose-proton symport protein (RhaT) S96127_RS02865 PF13247 4Fe-4S dicluster domain S96127_RS02865 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS02865 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster S96127_RS02870 PF12800 4Fe-4S binding domain S96127_RS02870 PF13247 4Fe-4S dicluster domain S96127_RS02875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain S96127_RS02875 PF01568 Molydopterin dinucleotide binding domain S96127_RS02875 PF00384 Molybdopterin oxidoreductase S96127_RS02880 PF11412 Disulphide bond corrector protein DsbC S96127_RS02880 PF02683 Cytochrome C biogenesis protein transmembrane region S96127_RS02885 PF03091 CutA1 divalent ion tolerance protein S96127_RS02890 PF03605 Anaerobic c4-dicarboxylate membrane transporter S96127_RS02895 PF00206 Lyase S96127_RS02895 PF10415 Fumarase C C-terminus S96127_RS02900 PF04186 FxsA cytoplasmic membrane protein S96127_RS02905 PF00166 Chaperonin 10 Kd subunit S96127_RS02910 PF00118 TCP-1/cpn60 chaperonin family S96127_RS02915 PF13698 Domain of unknown function (DUF4156) S96127_RS02920 PF04055 Radical SAM superfamily S96127_RS02925 PF09285 Elongation factor P, C-terminal S96127_RS02925 PF01132 Elongation factor P (EF-P) OB domain S96127_RS02925 PF08207 Elongation factor P (EF-P) KOW-like domain S96127_RS02930 PF00893 Small Multidrug Resistance protein S96127_RS02935 PF02313 Fumarate reductase subunit D S96127_RS02940 PF02300 Fumarate reductase subunit C S96127_RS02945 PF13183 4Fe-4S dicluster domain S96127_RS02945 PF13085 2Fe-2S iron-sulfur cluster binding domain S96127_RS02950 PF02910 Fumarate reductase flavoprotein C-term S96127_RS02950 PF00890 FAD binding domain S96127_RS02960 PF00152 tRNA synthetases class II (D, K and N) S96127_RS02965 PF00924 Mechanosensitive ion channel S96127_RS02965 PF12795 Mechanosensitive ion channel porin domain S96127_RS02965 PF12794 Mechanosensitive ion channel inner membrane domain 1 S96127_RS02970 PF02666 Phosphatidylserine decarboxylase S96127_RS02975 PF03193 RsgA GTPase S96127_RS02980 PF00929 Exonuclease S96127_RS02995 PF08331 Domain of unknown function (DUF1730) S96127_RS03000 PF01256 Carbohydrate kinase S96127_RS03000 PF03853 YjeF-related protein N-terminus S96127_RS03005 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE S96127_RS03010 PF01520 N-acetylmuramoyl-L-alanine amidase S96127_RS03015 PF01119 DNA mismatch repair protein, C-terminal domain S96127_RS03015 PF08676 MutL C terminal dimerisation domain S96127_RS03025 PF17209 Hfq protein S96127_RS03030 PF16360 GTP-binding GTPase Middle Region S96127_RS03030 PF13167 GTP-binding GTPase N-terminal S96127_RS03030 PF01926 50S ribosome-binding GTPase S96127_RS03035 PF01145 SPFH domain / Band 7 family S96127_RS03035 PF12221 Bacterial membrane protein N terminal S96127_RS03040 PF01145 SPFH domain / Band 7 family S96127_RS03045 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) S96127_RS03050 PF00709 Adenylosuccinate synthetase S96127_RS03055 PF02082 Transcriptional regulator S96127_RS03060 PF17876 Cold shock domain S96127_RS03060 PF08461 Ribonuclease R winged-helix domain S96127_RS03060 PF08206 Ribonuclease B OB domain S96127_RS03060 PF00773 RNB domain S96127_RS03060 PF00575 S1 RNA binding domain S96127_RS03065 PF08032 RNA 2'-O ribose methyltransferase substrate binding S96127_RS03065 PF00588 SpoU rRNA Methylase family S96127_RS03070 PF18158 Adaptive response protein AidB N-terminal domain S96127_RS03070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain S96127_RS03070 PF02770 Acyl-CoA dehydrogenase, middle domain S96127_RS03075 PF07338 Protein of unknown function (DUF1471) S96127_RS03085 PF01695 IstB-like ATP binding protein S96127_RS03090 PF00665 Integrase core domain S96127_RS03090 PF02796 Helix-turn-helix domain of resolvase S96127_RS03095 PF00326 Prolyl oligopeptidase family S96127_RS03100 PF01250 Ribosomal protein S6 S96127_RS03105 PF00436 Single-strand binding protein family S96127_RS03110 PF01084 Ribosomal protein S18 S96127_RS03115 PF01281 Ribosomal protein L9, N-terminal domain S96127_RS03115 PF03948 Ribosomal protein L9, C-terminal domain S96127_RS03120 PF01797 Transposase IS200 like S96127_RS03130 PF04225 Opacity-associated protein A LysM-like domain S96127_RS03130 PF08525 Opacity-associated protein A N-terminal motif S96127_RS03135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase S96127_RS03135 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase S96127_RS03140 PF04405 Domain of Unknown function (DUF542) S96127_RS03140 PF01814 Hemerythrin HHE cation binding domain S96127_RS03145 PF00149 Calcineurin-like phosphoesterase S96127_RS03145 PF02872 5'-nucleotidase, C-terminal domain S96127_RS03150 PF00459 Inositol monophosphatase family S96127_RS03155 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) S96127_RS03160 PF06526 Protein of unknown function (DUF1107) S96127_RS03165 PF03471 Transporter associated domain S96127_RS03165 PF01595 Cyclin M transmembrane N-terminal domain S96127_RS03165 PF00571 CBS domain S96127_RS03170 PF01625 Peptide methionine sulfoxide reductase S96127_RS03175 PF07244 Surface antigen variable number repeat S96127_RS03175 PF17243 POTRA domain TamA domain 1 S96127_RS03175 PF01103 Surface antigen S96127_RS03180 PF04357 TamB, inner membrane protein subunit of TAM complex S96127_RS03185 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like S96127_RS03190 PF00719 Inorganic pyrophosphatase S96127_RS03195 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain S96127_RS03200 PF08245 Mur ligase middle domain S96127_RS03200 PF01225 Mur ligase family, catalytic domain S96127_RS03200 PF02875 Mur ligase family, glutamate ligase domain S96127_RS03210 PF01316 Arginine repressor, DNA binding domain S96127_RS03210 PF02863 Arginine repressor, C-terminal domain S96127_RS03215 PF00056 lactate/malate dehydrogenase, NAD binding domain S96127_RS03215 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain S96127_RS03220 PF13693 Winged helix-turn-helix DNA-binding S96127_RS03230 PF00348 Polyprenyl synthetase S96127_RS03235 PF00829 Ribosomal prokaryotic L21 protein S96127_RS03240 PF01016 Ribosomal L27 protein S96127_RS03245 PF00892 EamA-like transporter family S96127_RS03250 PF01018 GTP1/OBG S96127_RS03250 PF01926 50S ribosome-binding GTPase S96127_RS03255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS03255 PF00672 HAMP domain S96127_RS03255 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS03260 PF00072 Response regulator receiver domain S96127_RS03260 PF00486 Transcriptional regulatory protein, C terminal S96127_RS03265 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family S96127_RS03270 PF01272 Transcription elongation factor, GreA/GreB, C-term S96127_RS03270 PF03449 Transcription elongation factor, N-terminal S96127_RS03275 PF01985 CRS1 / YhbY (CRM) domain S96127_RS03280 PF01728 FtsJ-like methyltransferase S96127_RS03285 PF01434 Peptidase family M41 S96127_RS03285 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS03285 PF06480 FtsH Extracellular S96127_RS03285 PF17862 AAA+ lid domain S96127_RS03290 PF00809 Pterin binding enzyme S96127_RS03295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II S96127_RS03295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III S96127_RS03295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain S96127_RS03295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I S96127_RS03300 PF03840 Preprotein translocase SecG subunit S96127_RS03315 PF02576 RimP N-terminal domain S96127_RS03315 PF17384 RimP C-terminal SH3 domain S96127_RS03320 PF00575 S1 RNA binding domain S96127_RS03320 PF08529 NusA N-terminal domain S96127_RS03320 PF13184 NusA-like KH domain S96127_RS03325 PF04760 Translation initiation factor IF-2, N-terminal region S96127_RS03325 PF08364 Bacterial translation initiation factor IF-2 associated region S96127_RS03325 PF11987 Translation-initiation factor 2 S96127_RS03325 PF03144 Elongation factor Tu domain 2 S96127_RS03325 PF00009 Elongation factor Tu GTP binding domain S96127_RS03330 PF02033 Ribosome-binding factor A S96127_RS03335 PF09157 Pseudouridine synthase II TruB, C-terminal S96127_RS03335 PF16198 tRNA pseudouridylate synthase B C-terminal domain S96127_RS03335 PF01509 TruB family pseudouridylate synthase (N terminal domain) S96127_RS03340 PF00312 Ribosomal protein S15 S96127_RS03350 PF08448 PAS fold S96127_RS03350 PF00563 EAL domain S96127_RS03350 PF08447 PAS fold S96127_RS03350 PF00990 Diguanylate cyclase, GGDEF domain S96127_RS03360 PF00529 HlyD membrane-fusion protein of T1SS S96127_RS03360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS03365 PF00873 AcrB/AcrD/AcrF family S96127_RS03370 PF07906 ShET2 enterotoxin, N-terminal region S96127_RS03380 PF03797 Autotransporter beta-domain S96127_RS03385 PF14496 C-terminal novel E3 ligase, LRR-interacting S96127_RS03385 PF12468 Type III secretion system leucine rich repeat protein S96127_RS03395 PF12468 Type III secretion system leucine rich repeat protein S96127_RS03395 PF14496 C-terminal novel E3 ligase, LRR-interacting S96127_RS03395 PF14496 C-terminal novel E3 ligase, LRR-interacting S96127_RS03395 PF12468 Type III secretion system leucine rich repeat protein S96127_RS03400 PF14496 C-terminal novel E3 ligase, LRR-interacting S96127_RS03400 PF12468 Type III secretion system leucine rich repeat protein S96127_RS03405 PF03806 AbgT putative transporter family S96127_RS03410 PF07687 Peptidase dimerisation domain S96127_RS03410 PF01546 Peptidase family M20/M25/M40 S96127_RS03415 PF07715 TonB-dependent Receptor Plug Domain S96127_RS03415 PF00593 TonB dependent receptor S96127_RS03425 PF00665 Integrase core domain S96127_RS03425 PF02796 Helix-turn-helix domain of resolvase S96127_RS03430 PF01695 IstB-like ATP binding protein S96127_RS03435 PF00501 AMP-binding enzyme S96127_RS03435 PF00668 Condensation domain S96127_RS03435 PF08242 Methyltransferase domain S96127_RS03435 PF00550 Phosphopantetheine attachment site S96127_RS03440 PF00668 Condensation domain S96127_RS03440 PF00501 AMP-binding enzyme S96127_RS03440 PF13193 AMP-binding enzyme C-terminal domain S96127_RS03445 PF00668 Condensation domain S96127_RS03445 PF08242 Methyltransferase domain S96127_RS03445 PF00501 AMP-binding enzyme S96127_RS03445 PF00550 Phosphopantetheine attachment site S96127_RS03460 PF00975 Thioesterase domain S96127_RS03470 PF04954 Siderophore-interacting protein S96127_RS03470 PF08021 Siderophore-interacting FAD-binding domain S96127_RS03470 PF00664 ABC transporter transmembrane region S96127_RS03470 PF00005 ABC transporter S96127_RS03475 PF00664 ABC transporter transmembrane region S96127_RS03475 PF00005 ABC transporter S96127_RS03490 PF02447 GntP family permease S96127_RS03500 PF12951 Passenger-associated-transport-repeat S96127_RS03505 PF04717 Type VI secretion system, phage-baseplate injector S96127_RS03515 PF05593 RHS Repeat S96127_RS03515 PF03527 RHS protein S96127_RS03530 PF00939 Sodium:sulfate symporter transmembrane region S96127_RS03535 PF00356 Bacterial regulatory proteins, lacI family S96127_RS03555 PF07715 TonB-dependent Receptor Plug Domain S96127_RS03555 PF00593 TonB dependent receptor S96127_RS03560 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) S96127_RS03565 PF06276 Ferric iron reductase FhuF-like transporter S96127_RS03565 PF04183 IucA / IucC family S96127_RS03600 PF03472 Autoinducer binding domain S96127_RS03600 PF00196 Bacterial regulatory proteins, luxR family S96127_RS03605 PF00765 Autoinducer synthase S96127_RS03610 PF02517 CPBP intramembrane metalloprotease S96127_RS03635 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath S96127_RS03650 PF05736 OprF membrane domain S96127_RS03650 PF00691 OmpA family S96127_RS03660 PF10431 C-terminal, D2-small domain, of ClpB protein S96127_RS03660 PF17871 AAA lid domain S96127_RS03660 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS03660 PF07724 AAA domain (Cdc48 subfamily) S96127_RS03665 PF04717 Type VI secretion system, phage-baseplate injector S96127_RS03665 PF13296 Putative type VI secretion system Rhs element Vgr S96127_RS03665 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) S96127_RS03725 PF01276 Orn/Lys/Arg decarboxylase, major domain S96127_RS03725 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain S96127_RS03725 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain S96127_RS03730 PF13407 Periplasmic binding protein domain S96127_RS03735 PF00005 ABC transporter S96127_RS03740 PF02653 Branched-chain amino acid transport system / permease component S96127_RS03745 PF07715 TonB-dependent Receptor Plug Domain S96127_RS03755 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain S96127_RS03755 PF01464 Transglycosylase SLT domain S96127_RS03760 PF04362 Bacterial Fe(2+) trafficking S96127_RS03765 PF10576 Iron-sulfur binding domain of endonuclease III S96127_RS03765 PF14815 NUDIX domain S96127_RS03765 PF00633 Helix-hairpin-helix motif S96127_RS03765 PF00730 HhH-GPD superfamily base excision DNA repair protein S96127_RS03770 PF02390 Putative methyltransferase S96127_RS03775 PF04320 Protein with unknown function (DUF469) S96127_RS03780 PF04960 Glutaminase S96127_RS03790 PF12146 Serine aminopeptidase, S33 S96127_RS03790 PF11713 Peptidase C80 family S96127_RS03790 PF11647 Membrane Localization Domain S96127_RS03790 PF07634 RtxA repeat S96127_RS03790 PF16671 Actin cross-linking domain S96127_RS03795 PF06969 HemN C-terminal domain S96127_RS03795 PF04055 Radical SAM superfamily S96127_RS03800 PF01725 Ham1 family S96127_RS03805 PF02594 Uncharacterised ACR, YggU family COG1872 S96127_RS03810 PF02325 YGGT family S96127_RS03815 PF03807 NADP oxidoreductase coenzyme F420-dependent S96127_RS03815 PF14748 Pyrroline-5-carboxylate reductase dimerisation S96127_RS03820 PF01168 Alanine racemase, N-terminal domain S96127_RS03825 PF00437 Type II/IV secretion system protein S96127_RS03830 PF04371 Porphyromonas-type peptidyl-arginine deiminase S96127_RS03835 PF00795 Carbon-nitrogen hydrolase S96127_RS03840 PF03652 Holliday junction resolvase S96127_RS03845 PF02622 Uncharacterized ACR, COG1678 S96127_RS03850 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain S96127_RS03850 PF02951 Prokaryotic glutathione synthetase, N-terminal domain S96127_RS03855 PF04452 RNA methyltransferase S96127_RS03860 PF04231 Endonuclease I S96127_RS03865 PF17283 SprT-like zinc ribbon domain S96127_RS03865 PF10263 SprT-like family S96127_RS03870 PF00438 S-adenosylmethionine synthetase, N-terminal domain S96127_RS03870 PF02772 S-adenosylmethionine synthetase, central domain S96127_RS03870 PF02773 S-adenosylmethionine synthetase, C-terminal domain S96127_RS03875 PF17810 Arginine decarboxylase helical bundle domain S96127_RS03875 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain S96127_RS03875 PF17944 Arginine decarboxylase C-terminal helical extension S96127_RS03880 PF00355 Rieske [2Fe-2S] domain S96127_RS03890 PF01435 Peptidase family M48 S96127_RS03895 PF00456 Transketolase, thiamine diphosphate binding domain S96127_RS03895 PF02780 Transketolase, C-terminal domain S96127_RS03895 PF02779 Transketolase, pyrimidine binding domain S96127_RS03905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain S96127_RS03905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain S96127_RS03910 PF00162 Phosphoglycerate kinase S96127_RS03915 PF01116 Fructose-bisphosphate aldolase class-II S96127_RS03925 PF05552 Conserved TM helix S96127_RS03925 PF00924 Mechanosensitive ion channel S96127_RS03930 PF01810 LysE type translocator S96127_RS03935 PF04402 Protein of unknown function (DUF541) S96127_RS03940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS03940 PF03466 LysR substrate binding domain S96127_RS03945 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) S96127_RS03950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain S96127_RS03950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain S96127_RS03950 PF01842 ACT domain S96127_RS03960 PF01812 5-formyltetrahydrofolate cyclo-ligase family S96127_RS03970 PF05164 Cell division protein ZapA S96127_RS03975 PF03695 Uncharacterised protein family (UPF0149) S96127_RS03980 PF00557 Metallopeptidase family M24 S96127_RS03980 PF05195 Aminopeptidase P, N-terminal domain S96127_RS03985 PF01494 FAD binding domain S96127_RS03990 PF01494 FAD binding domain S96127_RS03995 PF01571 Aminomethyltransferase folate-binding domain S96127_RS03995 PF08669 Glycine cleavage T-protein C-terminal barrel domain S96127_RS04000 PF01597 Glycine cleavage H-protein S96127_RS04005 PF02347 Glycine cleavage system P-protein S96127_RS04035 PF03006 Haemolysin-III related S96127_RS04045 PF01571 Aminomethyltransferase folate-binding domain S96127_RS04050 PF03937 Flavinator of succinate dehydrogenase S96127_RS04055 PF07254 Membrane-bound toxin component of toxin-antitoxin system S96127_RS04060 PF00072 Response regulator receiver domain S96127_RS04060 PF00486 Transcriptional regulatory protein, C terminal S96127_RS04065 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS04065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS04065 PF00672 HAMP domain S96127_RS04070 PF06123 Inner membrane protein CreD S96127_RS04075 PF00258 Flavodoxin S96127_RS04080 PF02899 Phage integrase, N-terminal SAM-like domain S96127_RS04080 PF00589 Phage integrase family S96127_RS04085 PF10411 Disulfide bond isomerase protein N-terminus S96127_RS04085 PF13098 Thioredoxin-like domain S96127_RS04090 PF17768 RecJ OB domain S96127_RS04090 PF02272 DHHA1 domain S96127_RS04090 PF01368 DHH family S96127_RS04100 PF00152 tRNA synthetases class II (D, K and N) S96127_RS04100 PF01336 OB-fold nucleic acid binding domain S96127_RS04110 PF00589 Phage integrase family S96127_RS04110 PF13356 Arm DNA-binding domain S96127_RS04110 PF14659 Phage integrase, N-terminal SAM-like domain S96127_RS04130 PF15723 Motility quorum-sensing regulator, toxin of MqsA S96127_RS04135 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA S96127_RS04225 PF03551 Transcriptional regulator PadR-like family S96127_RS04230 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family S96127_RS04240 PF13407 Periplasmic binding protein domain S96127_RS04245 PF02653 Branched-chain amino acid transport system / permease component S96127_RS04255 PF17912 MalK OB fold domain S96127_RS04255 PF00005 ABC transporter S96127_RS04260 PF13416 Bacterial extracellular solute-binding protein S96127_RS04265 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS04270 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS04275 PF07745 Glycosyl hydrolase family 53 S96127_RS04280 PF02449 Beta-galactosidase S96127_RS04280 PF08533 Beta-galactosidase C-terminal domain S96127_RS04280 PF08532 Beta-galactosidase trimerisation domain S96127_RS04285 PF02378 Phosphotransferase system, EIIC S96127_RS04285 PF00367 phosphotransferase system, EIIB S96127_RS04290 PF02264 LamB porin S96127_RS04295 PF00356 Bacterial regulatory proteins, lacI family S96127_RS04300 PF13802 Galactose mutarotase-like S96127_RS04300 PF01055 Glycosyl hydrolases family 31 S96127_RS04300 PF17137 Domain of unknown function (DUF5110) S96127_RS04300 PF16338 Domain of unknown function (DUF4968) S96127_RS04305 PF07690 Major Facilitator Superfamily S96127_RS04310 PF00356 Bacterial regulatory proteins, lacI family S96127_RS04320 PF01116 Fructose-bisphosphate aldolase class-II S96127_RS04330 PF00884 Sulfatase S96127_RS04335 PF13186 Iron-sulfur cluster-binding domain S96127_RS04335 PF04055 Radical SAM superfamily S96127_RS04340 PF07470 Glycosyl Hydrolase Family 88 S96127_RS04350 PF01979 Amidohydrolase family S96127_RS04355 PF03610 PTS system fructose IIA component S96127_RS04360 PF03613 PTS system mannose/fructose/sorbose family IID component S96127_RS04365 PF03609 PTS system sorbose-specific iic component S96127_RS04370 PF03830 PTS system sorbose subfamily IIB component S96127_RS04375 PF01380 SIS domain S96127_RS04380 PF08013 Tagatose 6 phosphate kinase S96127_RS04385 PF08220 DeoR-like helix-turn-helix domain S96127_RS04385 PF00455 DeoR C terminal sensor domain S96127_RS04390 PF00884 Sulfatase S96127_RS04395 PF01797 Transposase IS200 like S96127_RS04400 PF02796 Helix-turn-helix domain of resolvase S96127_RS04400 PF00665 Integrase core domain S96127_RS04405 PF01695 IstB-like ATP binding protein S96127_RS04410 PF09092 Lyase, N terminal S96127_RS04410 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain S96127_RS04410 PF02278 Polysaccharide lyase family 8, super-sandwich domain S96127_RS04410 PF09093 Lyase, catalytic S96127_RS04430 PF00484 Carbonic anhydrase S96127_RS04445 PF00263 Bacterial type II and III secretion system protein S96127_RS04445 PF03958 Bacterial type II/III secretion system short domain S96127_RS04450 PF00437 Type II/IV secretion system protein S96127_RS04460 PF08334 Type II secretion system (T2SS), protein G S96127_RS04460 PF07963 Prokaryotic N-terminal methylation motif S96127_RS04470 PF02501 Type II secretion system (T2SS), protein I S96127_RS04470 PF07963 Prokaryotic N-terminal methylation motif S96127_RS04475 PF07963 Prokaryotic N-terminal methylation motif S96127_RS04475 PF11612 Type II secretion system (T2SS), protein J S96127_RS04495 PF06750 Bacterial Peptidase A24 N-terminal domain S96127_RS04495 PF01478 Type IV leader peptidase family S96127_RS04515 PF00672 HAMP domain S96127_RS04515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain S96127_RS04515 PF02203 Tar ligand binding domain homologue S96127_RS04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS04530 PF03466 LysR substrate binding domain S96127_RS04535 PF07690 Major Facilitator Superfamily S96127_RS04540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS04540 PF03466 LysR substrate binding domain S96127_RS04545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain S96127_RS04545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain S96127_RS04550 PF00356 Bacterial regulatory proteins, lacI family S96127_RS04555 PF00384 Molybdopterin oxidoreductase S96127_RS04555 PF01568 Molydopterin dinucleotide binding domain S96127_RS04565 PF07690 Major Facilitator Superfamily S96127_RS04580 PF00248 Aldo/keto reductase family S96127_RS04585 PF02976 DNA mismatch repair enzyme MutH S96127_RS04590 PF00293 NUDIX domain S96127_RS04595 PF01590 GAF domain S96127_RS04595 PF05524 PEP-utilising enzyme, N-terminal S96127_RS04595 PF02896 PEP-utilising enzyme, TIM barrel domain S96127_RS04595 PF00391 PEP-utilising enzyme, mobile domain S96127_RS04600 PF01790 Prolipoprotein diacylglyceryl transferase S96127_RS04605 PF00303 Thymidylate synthase S96127_RS04630 PF17946 RecC C-terminal domain S96127_RS04635 PF16187 Middle or third domain of peptidase_M16 S96127_RS04635 PF05193 Peptidase M16 inactive domain S96127_RS04635 PF00675 Insulinase (Peptidase family M16) S96127_RS04640 PF12705 PD-(D/E)XK nuclease superfamily S96127_RS04640 PF00580 UvrD/REP helicase N-terminal domain S96127_RS04640 PF13361 UvrD-like helicase C-terminal domain S96127_RS04645 PF13538 UvrD-like helicase C-terminal domain S96127_RS04650 PF00696 Amino acid kinase family S96127_RS04650 PF00583 Acetyltransferase (GNAT) family S96127_RS04655 PF01520 N-acetylmuramoyl-L-alanine amidase S96127_RS04655 PF11741 AMIN domain S96127_RS04670 PF03562 MltA specific insert domain S96127_RS04670 PF06725 3D domain S96127_RS04675 PF00899 ThiF family S96127_RS04680 PF02657 Fe-S metabolism associated domain S96127_RS04685 PF00266 Aminotransferase class-V S96127_RS04695 PF03466 LysR substrate binding domain S96127_RS04695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS04700 PF04241 Protein of unknown function (DUF423) S96127_RS04705 PF01728 FtsJ-like methyltransferase S96127_RS04705 PF18125 RlmM ferredoxin-like domain S96127_RS04710 PF01367 5'-3' exonuclease, C-terminal SAM fold S96127_RS04710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain S96127_RS04715 PF11892 Domain of unknown function (DUF3412) S96127_RS04715 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases S96127_RS04715 PF03641 Possible lysine decarboxylase S96127_RS04720 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term S96127_RS04720 PF14489 QueF-like protein S96127_RS04725 PF07348 Syd protein (SUKH-2) S96127_RS04730 PF01797 Transposase IS200 like S96127_RS04735 PF04287 tRNA pseudouridine synthase C S96127_RS04740 PF00849 RNA pseudouridylate synthase S96127_RS04745 PF00258 Flavodoxin S96127_RS04750 PF11944 Protein of unknown function (DUF3461) S96127_RS04760 PF00132 Bacterial transferase hexapeptide (six repeats) S96127_RS04760 PF14602 Hexapeptide repeat of succinyl-transferase S96127_RS04760 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal S96127_RS04765 PF01842 ACT domain S96127_RS04765 PF08335 GlnD PII-uridylyltransferase S96127_RS04765 PF01909 Nucleotidyltransferase domain S96127_RS04765 PF01966 HD domain S96127_RS04770 PF00557 Metallopeptidase family M24 S96127_RS04775 PF00318 Ribosomal protein S2 S96127_RS04780 PF00889 Elongation factor TS S96127_RS04785 PF00696 Amino acid kinase family S96127_RS04790 PF01765 Ribosome recycling factor S96127_RS04795 PF13288 DXP reductoisomerase C-terminal domain S96127_RS04795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase S96127_RS04795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain S96127_RS04800 PF01255 Putative undecaprenyl diphosphate synthase S96127_RS04810 PF17820 PDZ domain S96127_RS04810 PF02163 Peptidase family M50 S96127_RS04815 PF07244 Surface antigen variable number repeat S96127_RS04815 PF01103 Surface antigen S96127_RS04820 PF03938 Outer membrane protein (OmpH-like) S96127_RS04825 PF00132 Bacterial transferase hexapeptide (six repeats) S96127_RS04825 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD S96127_RS04830 PF07977 FabA-like domain S96127_RS04835 PF00132 Bacterial transferase hexapeptide (six repeats) S96127_RS04835 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 S96127_RS04840 PF02684 Lipid-A-disaccharide synthetase S96127_RS04845 PF01351 Ribonuclease HII S96127_RS04850 PF02811 PHP domain S96127_RS04850 PF14579 Helix-hairpin-helix motif S96127_RS04850 PF01336 OB-fold nucleic acid binding domain S96127_RS04850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain S96127_RS04850 PF07733 Bacterial DNA polymerase III alpha NTPase domain S96127_RS04855 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit S96127_RS04860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily S96127_RS04865 PF11734 TilS substrate C-terminal domain S96127_RS04865 PF01171 PP-loop family S96127_RS04865 PF09179 TilS substrate binding domain S96127_RS04870 PF00034 Cytochrome c S96127_RS04875 PF07073 Modulator of Rho-dependent transcription termination (ROF) S96127_RS04880 PF06786 Uncharacterised protein family (UPF0253) S96127_RS04885 PF07152 YaeQ protein S96127_RS04890 PF00472 RF-1 domain S96127_RS04895 PF17185 NlpE C-terminal OB domain S96127_RS04895 PF04170 NlpE N-terminal domain S96127_RS04900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) S96127_RS04900 PF04073 Aminoacyl-tRNA editing domain S96127_RS04900 PF03129 Anticodon binding domain S96127_RS04905 PF01980 tRNA-methyltransferase O S96127_RS04905 PF18389 TrmO C-terminal domain S96127_RS04910 PF16358 RcsF lipoprotein S96127_RS04915 PF03180 NLPA lipoprotein S96127_RS04920 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS04925 PF09383 NIL domain S96127_RS04925 PF00005 ABC transporter S96127_RS04960 PF00248 Aldo/keto reductase family S96127_RS04970 PF03372 Endonuclease/Exonuclease/phosphatase family S96127_RS04975 PF01464 Transglycosylase SLT domain S96127_RS04975 PF01476 LysM domain S96127_RS04980 PF00753 Metallo-beta-lactamase superfamily S96127_RS04980 PF16123 Hydroxyacylglutathione hydrolase C-terminus S96127_RS04985 PF08241 Methyltransferase domain S96127_RS04990 PF00075 RNase H S96127_RS04995 PF00929 Exonuclease S96127_RS05005 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin S96127_RS05015 PF01695 IstB-like ATP binding protein S96127_RS05020 PF00665 Integrase core domain S96127_RS05020 PF02796 Helix-turn-helix domain of resolvase S96127_RS05030 PF05973 Phage derived protein Gp49-like (DUF891) S96127_RS05080 PF00589 Phage integrase family S96127_RS05080 PF13356 Arm DNA-binding domain S96127_RS05095 PF01668 SmpB protein S96127_RS05100 PF03364 Polyketide cyclase / dehydrase and lipid transport S96127_RS05105 PF03658 RnfH family Ubiquitin S96127_RS05110 PF04355 SmpA / OmlA family S96127_RS05115 PF02463 RecF/RecN/SMC N terminal domain S96127_RS05120 PF01513 ATP-NAD kinase S96127_RS05125 PF01025 GrpE S96127_RS05130 PF00285 Citrate synthase, C-terminal domain S96127_RS05135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit S96127_RS05140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit S96127_RS05145 PF02910 Fumarate reductase flavoprotein C-term S96127_RS05145 PF00890 FAD binding domain S96127_RS05150 PF13085 2Fe-2S iron-sulfur cluster binding domain S96127_RS05155 PF16078 2-oxoglutarate dehydrogenase N-terminus S96127_RS05155 PF16870 2-oxoglutarate dehydrogenase C-terminal S96127_RS05155 PF02779 Transketolase, pyrimidine binding domain S96127_RS05155 PF00676 Dehydrogenase E1 component S96127_RS05160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) S96127_RS05160 PF00364 Biotin-requiring enzyme S96127_RS05160 PF02817 e3 binding domain S96127_RS05165 PF08442 ATP-grasp domain S96127_RS05165 PF00549 CoA-ligase S96127_RS05170 PF02629 CoA binding domain S96127_RS05170 PF00549 CoA-ligase S96127_RS05175 PF01654 Cytochrome bd terminal oxidase subunit I S96127_RS05180 PF02322 Cytochrome bd terminal oxidase subunit II S96127_RS05185 PF08173 Membrane bound YbgT-like protein S96127_RS05190 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) S96127_RS05195 PF03061 Thioesterase superfamily S96127_RS05200 PF01618 MotA/TolQ/ExbB proton channel family S96127_RS05205 PF02472 Biopolymer transport protein ExbD/TolR S96127_RS05210 PF06519 TolA C-terminal S96127_RS05210 PF06519 TolA C-terminal S96127_RS05215 PF07676 WD40-like Beta Propeller Repeat S96127_RS05215 PF04052 TolB amino-terminal domain S96127_RS05220 PF00691 OmpA family S96127_RS05225 PF13174 Tetratricopeptide repeat S96127_RS05225 PF16331 TolA binding protein trimerisation S96127_RS05245 PF02445 Quinolinate synthetase A protein S96127_RS05250 PF04973 Nicotinamide mononucleotide transporter S96127_RS05255 PF01545 Cation efflux family S96127_RS05260 PF00793 DAHP synthetase I family S96127_RS05265 PF00300 Histidine phosphatase superfamily (branch 1) S96127_RS05275 PF01263 Aldose 1-epimerase S96127_RS05285 PF08544 GHMP kinases C terminal S96127_RS05285 PF10509 Galactokinase galactose-binding signature S96127_RS05285 PF00288 GHMP kinases N terminal domain S96127_RS05290 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain S96127_RS05290 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain S96127_RS05295 PF16363 GDP-mannose 4,6 dehydratase S96127_RS05305 PF00005 ABC transporter S96127_RS05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS05310 PF03459 TOBE domain S96127_RS05315 PF10766 Multidrug efflux pump-associated protein AcrZ S96127_RS05325 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS05330 PF03459 TOBE domain S96127_RS05330 PF00005 ABC transporter S96127_RS05340 PF10282 Lactonase, 7-bladed beta-propeller S96127_RS05345 PF00202 Aminotransferase class-III S96127_RS05350 PF04055 Radical SAM superfamily S96127_RS05350 PF06968 Biotin and Thiamin Synthesis associated domain S96127_RS05355 PF00155 Aminotransferase class I and II S96127_RS05360 PF08241 Methyltransferase domain S96127_RS05370 PF00005 ABC transporter S96127_RS05370 PF09383 NIL domain S96127_RS05375 PF12344 Ultra-violet resistance protein B S96127_RS05375 PF17757 UvrB interaction domain S96127_RS05375 PF04851 Type III restriction enzyme, res subunit S96127_RS05375 PF00271 Helicase conserved C-terminal domain S96127_RS05375 PF02151 UvrB/uvrC motif S96127_RS05380 PF09905 DNA-binding protein VF530 S96127_RS05385 PF01933 Uncharacterised protein family UPF0052 S96127_RS05390 PF04055 Radical SAM superfamily S96127_RS05390 PF06463 Molybdenum Cofactor Synthesis C S96127_RS05395 PF01967 MoaC family S96127_RS05400 PF02597 ThiS family S96127_RS05405 PF02391 MoaE protein S96127_RS05410 PF01027 Inhibitor of apoptosis-promoting Bax1 S96127_RS05415 PF01797 Transposase IS200 like S96127_RS05420 PF00732 GMC oxidoreductase S96127_RS05420 PF05199 GMC oxidoreductase S96127_RS05425 PF00171 Aldehyde dehydrogenase family S96127_RS05430 PF00440 Bacterial regulatory proteins, tetR family S96127_RS05430 PF13977 BetI-type transcriptional repressor, C-terminal S96127_RS05435 PF02028 BCCT, betaine/carnitine/choline family transporter S96127_RS05440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS05440 PF03466 LysR substrate binding domain S96127_RS05450 PF01048 Phosphorylase superfamily S96127_RS05470 PF13801 Heavy-metal resistance S96127_RS05475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS05475 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS05480 PF02954 Bacterial regulatory protein, Fis family S96127_RS05480 PF00158 Sigma-54 interaction domain S96127_RS05480 PF00072 Response regulator receiver domain S96127_RS05485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family S96127_RS05490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS05490 PF03466 LysR substrate binding domain S96127_RS05515 PF00005 ABC transporter S96127_RS05520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS05525 PF09209 Tetracyclin repressor-like, C-terminal domain S96127_RS05525 PF00440 Bacterial regulatory proteins, tetR family S96127_RS05530 PF00271 Helicase conserved C-terminal domain S96127_RS05530 PF00270 DEAD/DEAH box helicase S96127_RS05565 PF00872 Transposase, Mutator family S96127_RS05590 PF01207 Dihydrouridine synthase (Dus) S96127_RS05600 PF00768 D-alanyl-D-alanine carboxypeptidase S96127_RS05605 PF09330 D-lactate dehydrogenase, membrane binding S96127_RS05605 PF01565 FAD binding domain S96127_RS05610 PF01928 CYTH domain S96127_RS05615 PF01844 HNH endonuclease S96127_RS05625 PF04226 Transglycosylase associated protein S96127_RS05630 PF00005 ABC transporter S96127_RS05640 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS05645 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS05650 PF07308 Protein of unknown function (DUF1456) S96127_RS05655 PF13188 PAS domain S96127_RS05655 PF00158 Sigma-54 interaction domain S96127_RS05655 PF02954 Bacterial regulatory protein, Fis family S96127_RS05660 PF02653 Branched-chain amino acid transport system / permease component S96127_RS05665 PF02653 Branched-chain amino acid transport system / permease component S96127_RS05670 PF00005 ABC transporter S96127_RS05675 PF00005 ABC transporter S96127_RS05690 PF00581 Rhodanese-like domain S96127_RS05695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system S96127_RS05700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system S96127_RS05705 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS05710 PF00005 ABC transporter S96127_RS05715 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS05720 PF13520 Amino acid permease S96127_RS05725 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain S96127_RS05725 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain S96127_RS05725 PF01276 Orn/Lys/Arg decarboxylase, major domain S96127_RS05735 PF00892 EamA-like transporter family S96127_RS05740 PF00267 Gram-negative porin S96127_RS05745 PF06733 DEAD_2 S96127_RS05745 PF13307 Helicase C-terminal domain S96127_RS05750 PF06628 Catalase-related immune-responsive S96127_RS05750 PF00199 Catalase S96127_RS05755 PF07437 YfaZ precursor S96127_RS05765 PF03222 Tryptophan/tyrosine permease family S96127_RS05770 PF00994 Probable molybdopterin binding domain S96127_RS05775 PF03974 Ecotin S96127_RS05780 PF00111 2Fe-2S iron-sulfur cluster binding domain S96127_RS05785 PF00268 Ribonucleotide reductase, small chain S96127_RS05790 PF02867 Ribonucleotide reductase, barrel domain S96127_RS05790 PF03477 ATP cone domain S96127_RS05790 PF00317 Ribonucleotide reductase, all-alpha domain S96127_RS05800 PF03989 DNA gyrase C-terminal domain, beta-propeller S96127_RS05800 PF00521 DNA gyrase/topoisomerase IV, subunit A S96127_RS05805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS05805 PF09456 RcsC Alpha-Beta-Loop (ABL) S96127_RS05805 PF00072 Response regulator receiver domain S96127_RS05805 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS05810 PF00196 Bacterial regulatory proteins, luxR family S96127_RS05810 PF00072 Response regulator receiver domain S96127_RS05815 PF16359 RcsD-ABL domain S96127_RS05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS05815 PF01627 Hpt domain S96127_RS05820 PF01627 Hpt domain S96127_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS05820 PF16359 RcsD-ABL domain S96127_RS05825 PF07690 Major Facilitator Superfamily S96127_RS05830 PF00267 Gram-negative porin S96127_RS05850 PF00144 Beta-lactamase S96127_RS05860 PF12706 Beta-lactamase superfamily domain S96127_RS05865 PF02743 Cache domain S96127_RS05865 PF00672 HAMP domain S96127_RS05865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain S96127_RS05870 PF01278 Omptin family S96127_RS05875 PF06183 DinI-like family S96127_RS05880 PF01381 Helix-turn-helix S96127_RS05880 PF00717 Peptidase S24-like S96127_RS05885 PF06530 Phage antitermination protein Q S96127_RS05890 PF07005 Sugar-binding N-terminal domain S96127_RS05890 PF17042 Nucleotide-binding C-terminal domain S96127_RS05900 PF08220 DeoR-like helix-turn-helix domain S96127_RS05900 PF00455 DeoR C terminal sensor domain S96127_RS05905 PF01261 Xylose isomerase-like TIM barrel S96127_RS05925 PF04984 Phage tail sheath protein subtilisin-like domain S96127_RS05925 PF17482 Phage tail sheath C-terminal domain S96127_RS05965 PF04865 Baseplate J-like protein S96127_RS05980 PF07484 Phage Tail Collar Domain S96127_RS05985 PF01380 SIS domain S96127_RS05985 PF01418 Helix-turn-helix domain, rpiR family S96127_RS05990 PF00232 Glycosyl hydrolase family 1 S96127_RS06010 PF05638 Type VI secretion system effector, Hcp S96127_RS06025 PF11893 Domain of unknown function (DUF3413) S96127_RS06025 PF00884 Sulfatase S96127_RS06030 PF07208 Protein of unknown function (DUF1414) S96127_RS06035 PF04245 37-kD nucleoid-associated bacterial protein S96127_RS06040 PF01797 Transposase IS200 like S96127_RS06045 PF01386 Ribosomal L25p family S96127_RS06050 PF00271 Helicase conserved C-terminal domain S96127_RS06050 PF04851 Type III restriction enzyme, res subunit S96127_RS06055 PF01479 S4 domain S96127_RS06055 PF00849 RNA pseudouridylate synthase S96127_RS06060 PF07690 Major Facilitator Superfamily S96127_RS06065 PF13989 YejG-like protein S96127_RS06070 PF00005 ABC transporter S96127_RS06070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region S96127_RS06075 PF12911 N-terminal TM domain of oligopeptide transport permease C S96127_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS06080 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS06085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle S96127_RS06090 PF00563 EAL domain S96127_RS06090 PF12792 CSS motif domain associated with EAL S96127_RS06095 PF00877 NlpC/P60 family S96127_RS06100 PF01569 PAP2 superfamily S96127_RS06105 PF02492 CobW/HypB/UreG, nucleotide-binding domain S96127_RS06105 PF07683 Cobalamin synthesis protein cobW C-terminal domain S96127_RS06110 PF00392 Bacterial regulatory proteins, gntR family S96127_RS06110 PF07729 FCD domain S96127_RS06115 PF01232 Mannitol dehydrogenase Rossmann domain S96127_RS06115 PF08125 Mannitol dehydrogenase C-terminal domain S96127_RS06120 PF03786 D-mannonate dehydratase (UxuA) S96127_RS06125 PF08207 Elongation factor P (EF-P) KOW-like domain S96127_RS06125 PF09285 Elongation factor P, C-terminal S96127_RS06125 PF01132 Elongation factor P (EF-P) OB domain S96127_RS06130 PF03222 Tryptophan/tyrosine permease family S96127_RS06135 PF03692 Putative zinc- or iron-chelating domain S96127_RS06145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain S96127_RS06145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain S96127_RS06145 PF01842 ACT domain S96127_RS06155 PF00171 Aldehyde dehydrogenase family S96127_RS06160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain S96127_RS06160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain S96127_RS06165 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) S96127_RS06175 PF00005 ABC transporter S96127_RS06180 PF02653 Branched-chain amino acid transport system / permease component S96127_RS06185 PF00293 NUDIX domain S96127_RS06190 PF00381 PTS HPr component phosphorylation site S96127_RS06190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 S96127_RS06195 PF00294 pfkB family carbohydrate kinase S96127_RS06200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit S96127_RS06200 PF02378 Phosphotransferase system, EIIC S96127_RS06205 PF00486 Transcriptional regulatory protein, C terminal S96127_RS06210 PF17550 Family of unknown function S96127_RS06220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS06220 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS06225 PF13953 PapC C-terminal domain S96127_RS06225 PF00577 Outer membrane usher protein S96127_RS06225 PF13954 PapC N-terminal domain S96127_RS06230 PF01261 Xylose isomerase-like TIM barrel S96127_RS06235 PF03601 Conserved hypothetical protein 698 S96127_RS06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS06240 PF03466 LysR substrate binding domain S96127_RS06245 PF00324 Amino acid permease S96127_RS06255 PF01032 FecCD transport family S96127_RS06260 PF00005 ABC transporter S96127_RS06265 PF07715 TonB-dependent Receptor Plug Domain S96127_RS06265 PF00593 TonB dependent receptor S96127_RS06270 PF13417 Glutathione S-transferase, N-terminal domain S96127_RS06270 PF00043 Glutathione S-transferase, C-terminal domain S96127_RS06285 PF03180 NLPA lipoprotein S96127_RS06290 PF09383 NIL domain S96127_RS06290 PF00005 ABC transporter S96127_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS06300 PF00768 D-alanyl-D-alanine carboxypeptidase S96127_RS06300 PF07943 Penicillin-binding protein 5, C-terminal domain S96127_RS06310 PF00455 DeoR C terminal sensor domain S96127_RS06310 PF08220 DeoR-like helix-turn-helix domain S96127_RS06315 PF01791 DeoC/LacD family aldolase S96127_RS06320 PF01569 PAP2 superfamily S96127_RS06330 PF02080 TrkA-C domain S96127_RS06330 PF06826 Predicted Permease Membrane Region S96127_RS06335 PF00462 Glutaredoxin S96127_RS06340 PF07214 Protein of unknown function (DUF1418) S96127_RS06345 PF10722 Putative bacterial sensory transduction regulator S96127_RS06350 PF13416 Bacterial extracellular solute-binding protein S96127_RS06355 PF00005 ABC transporter S96127_RS06355 PF08402 TOBE domain S96127_RS06360 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS06365 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS06370 PF10767 Protein of unknown function (DUF2593) S96127_RS06375 PF05958 tRNA (Uracil-5-)-methyltransferase S96127_RS06380 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS06405 PF01032 FecCD transport family S96127_RS06410 PF01032 FecCD transport family S96127_RS06415 PF00005 ABC transporter S96127_RS06420 PF03059 Nicotianamine synthase protein S96127_RS06425 PF10100 Staphylopine dehydrogenase S96127_RS06430 PF00892 EamA-like transporter family S96127_RS06440 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS06445 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS06450 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS06455 PF00005 ABC transporter S96127_RS06460 PF01817 Chorismate mutase type II S96127_RS06465 PF12883 Protein of unknown function (DUF3828) S96127_RS06470 PF01370 NAD dependent epimerase/dehydratase family S96127_RS06475 PF11066 Protein of unknown function (DUF2867) S96127_RS06475 PF13460 NAD(P)H-binding S96127_RS06480 PF01212 Beta-eliminating lyase S96127_RS06490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain S96127_RS06490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain S96127_RS06490 PF00205 Thiamine pyrophosphate enzyme, central domain S96127_RS06495 PF00175 Oxidoreductase NAD-binding domain S96127_RS06495 PF00111 2Fe-2S iron-sulfur cluster binding domain S96127_RS06495 PF00970 Oxidoreductase FAD-binding domain S96127_RS06500 PF03063 Prismane/CO dehydrogenase family S96127_RS06505 PF03956 Lysine exporter LysO S96127_RS06510 PF11398 Protein of unknown function (DUF2813) S96127_RS06515 PF04393 Protein of unknown function (DUF535) S96127_RS06520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS06525 PF00005 ABC transporter S96127_RS06525 PF02687 FtsX-like permease family S96127_RS06525 PF12704 MacB-like periplasmic core domain S96127_RS06530 PF00313 'Cold-shock' DNA-binding domain S96127_RS06535 PF02617 ATP-dependent Clp protease adaptor protein ClpS S96127_RS06540 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS06540 PF07724 AAA domain (Cdc48 subfamily) S96127_RS06540 PF10431 C-terminal, D2-small domain, of ClpB protein S96127_RS06540 PF17871 AAA lid domain S96127_RS06540 PF02861 Clp amino terminal domain, pathogenicity island component S96127_RS06550 PF01176 Translation initiation factor 1A / IF-1 S96127_RS06555 PF03588 Leucyl/phenylalanyl-tRNA protein transferase S96127_RS06560 PF00664 ABC transporter transmembrane region S96127_RS06560 PF00005 ABC transporter S96127_RS06565 PF00005 ABC transporter S96127_RS06565 PF00664 ABC transporter transmembrane region S96127_RS06570 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS06575 PF01037 Lrp/AsnC ligand binding domain S96127_RS06580 PF09397 Ftsk gamma domain S96127_RS06580 PF13491 4TM region of DNA translocase FtsK/SpoIIIE S96127_RS06580 PF17854 FtsK alpha domain S96127_RS06580 PF01580 FtsK/SpoIIIE family S96127_RS06585 PF03548 Outer membrane lipoprotein carrier protein LolA S96127_RS06590 PF12002 MgsA AAA+ ATPase C terminal S96127_RS06590 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS06590 PF16193 AAA C-terminal domain S96127_RS06595 PF02403 Seryl-tRNA synthetase N-terminal domain S96127_RS06595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) S96127_RS06605 PF01695 IstB-like ATP binding protein S96127_RS06610 PF00665 Integrase core domain S96127_RS06610 PF02796 Helix-turn-helix domain of resolvase S96127_RS06620 PF04055 Radical SAM superfamily S96127_RS06630 PF01228 Glycine radical S96127_RS06630 PF02901 Pyruvate formate lyase-like S96127_RS06635 PF01226 Formate/nitrite transporter S96127_RS06640 PF18381 YcaO cyclodehydratase C-terminal domain S96127_RS06640 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding S96127_RS06645 PF17763 Glutaminase/Asparaginase C-terminal domain S96127_RS06645 PF00710 Asparaginase, N-terminal S96127_RS06650 PF05662 Coiled stalk of trimeric autotransporter adhesin S96127_RS06650 PF05658 Head domain of trimeric autotransporter adhesin S96127_RS06650 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS06650 PF03895 YadA-like membrane anchor domain S96127_RS06650 PF05658 Head domain of trimeric autotransporter adhesin S96127_RS06650 PF03895 YadA-like membrane anchor domain S96127_RS06650 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS06650 PF05662 Coiled stalk of trimeric autotransporter adhesin S96127_RS06660 PF00266 Aminotransferase class-V S96127_RS06665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) S96127_RS06670 PF02224 Cytidylate kinase S96127_RS06675 PF00575 S1 RNA binding domain S96127_RS06680 PF00216 Bacterial DNA-binding protein S96127_RS06685 PF00753 Metallo-beta-lactamase superfamily S96127_RS06685 PF03772 Competence protein S96127_RS06690 PF00005 ABC transporter S96127_RS06690 PF00664 ABC transporter transmembrane region S96127_RS06695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase S96127_RS06700 PF07063 Domain of unknown function (DUF1338) S96127_RS06705 PF00313 'Cold-shock' DNA-binding domain S96127_RS06710 PF03966 Trm112p-like protein S96127_RS06715 PF02348 Cytidylyltransferase S96127_RS06720 PF01636 Phosphotransferase enzyme family S96127_RS06725 PF13847 Methyltransferase domain S96127_RS06730 PF17192 MukF middle domain S96127_RS06730 PF17193 MukF C-terminal domain S96127_RS06730 PF03882 MukF winged-helix domain S96127_RS06735 PF04288 MukE-like family S96127_RS06740 PF04310 MukB N-terminal S96127_RS06740 PF16330 MukB hinge domain S96127_RS06750 PF01471 Putative peptidoglycan binding domain S96127_RS06750 PF03734 L,D-transpeptidase catalytic domain S96127_RS06755 PF05951 Bacterial protein of unknown function (DUF882) S96127_RS06760 PF00753 Metallo-beta-lactamase superfamily S96127_RS06770 PF00155 Aminotransferase class I and II S96127_RS06775 PF00267 Gram-negative porin S96127_RS06780 PF00152 tRNA synthetases class II (D, K and N) S96127_RS06780 PF01336 OB-fold nucleic acid binding domain S96127_RS06785 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain S96127_RS06785 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family S96127_RS06790 PF17432 Domain of unknown function (DUF3458_C) ARM repeats S96127_RS06790 PF01433 Peptidase family M1 domain S96127_RS06790 PF11940 Domain of unknown function (DUF3458) Ig-like fold S96127_RS06795 PF01180 Dihydroorotate dehydrogenase S96127_RS06800 PF07126 Cell-division protein ZapC S96127_RS06805 PF00111 2Fe-2S iron-sulfur cluster binding domain S96127_RS06805 PF03473 MOSC domain S96127_RS06805 PF03476 MOSC N-terminal beta barrel domain S96127_RS06810 PF01170 Putative RNA methylase family UPF0020 S96127_RS06810 PF02926 THUMP domain S96127_RS06810 PF10672 S-adenosylmethionine-dependent methyltransferase S96127_RS06815 PF12848 ABC transporter S96127_RS06815 PF16326 ABC transporter C-terminal domain S96127_RS06815 PF00005 ABC transporter S96127_RS06820 PF04403 Paraquat-inducible protein A S96127_RS06825 PF02470 MlaD protein S96127_RS06835 PF03886 ABC-type transport auxiliary lipoprotein component S96127_RS06840 PF04957 Ribosome modulation factor S96127_RS06845 PF01797 Transposase IS200 like S96127_RS06855 PF01695 IstB-like ATP binding protein S96127_RS06860 PF00665 Integrase core domain S96127_RS06860 PF02796 Helix-turn-helix domain of resolvase S96127_RS06875 PF07977 FabA-like domain S96127_RS06880 PF05362 Lon protease (S16) C-terminal proteolytic domain S96127_RS06880 PF13654 AAA domain S96127_RS06885 PF17414 MatP C-terminal ribbon-helix-helix domain S96127_RS06885 PF06303 MatP N-terminal domain S96127_RS06890 PF01797 Transposase IS200 like S96127_RS06895 PF01389 OmpA-like transmembrane domain S96127_RS06895 PF00691 OmpA family S96127_RS06900 PF03846 Cell division inhibitor SulA S96127_RS06905 PF04993 TfoX N-terminal domain S96127_RS06905 PF04994 TfoX C-terminal domain S96127_RS06910 PF12805 FUSC-like inner membrane protein yccS S96127_RS06915 PF03733 Inner membrane component domain S96127_RS06920 PF12462 DNA helicase IV / RNA helicase N terminal S96127_RS06920 PF13361 UvrD-like helicase C-terminal domain S96127_RS06920 PF00580 UvrD/REP helicase N-terminal domain S96127_RS06925 PF02142 MGS-like domain S96127_RS06930 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) S96127_RS06935 PF13380 CoA binding domain S96127_RS06940 PF08755 Hemimethylated DNA-binding protein YccV like S96127_RS06945 PF17785 PUA-like domain S96127_RS06945 PF10672 S-adenosylmethionine-dependent methyltransferase S96127_RS06950 PF00708 Acylphosphatase S96127_RS06955 PF04358 DsrC like protein S96127_RS06975 PF01565 FAD binding domain S96127_RS06975 PF08031 Berberine and berberine like S96127_RS06990 PF07977 FabA-like domain S96127_RS06995 PF02801 Beta-ketoacyl synthase, C-terminal domain S96127_RS06995 PF00109 Beta-ketoacyl synthase, N-terminal domain S96127_RS07005 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal S96127_RS07005 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal S96127_RS07015 PF00378 Enoyl-CoA hydratase/isomerase S96127_RS07030 PF00550 Phosphopantetheine attachment site S96127_RS07035 PF00698 Acyl transferase domain S96127_RS07045 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath S96127_RS07060 PF00691 OmpA family S96127_RS07060 PF05736 OprF membrane domain S96127_RS07070 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS07070 PF07724 AAA domain (Cdc48 subfamily) S96127_RS07070 PF17871 AAA lid domain S96127_RS07070 PF10431 C-terminal, D2-small domain, of ClpB protein S96127_RS07075 PF04717 Type VI secretion system, phage-baseplate injector S96127_RS07075 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) S96127_RS07075 PF13296 Putative type VI secretion system Rhs element Vgr S96127_RS07165 PF00005 ABC transporter S96127_RS07165 PF12848 ABC transporter S96127_RS07175 PF00872 Transposase, Mutator family S96127_RS07180 PF00899 ThiF family S96127_RS07185 PF03454 MoeA C-terminal region (domain IV) S96127_RS07185 PF03453 MoeA N-terminal region (domain I and II) S96127_RS07185 PF00994 Probable molybdopterin binding domain S96127_RS07195 PF00005 ABC transporter S96127_RS07200 PF13533 Biotin-lipoyl like S96127_RS07215 PF00756 Putative esterase S96127_RS07220 PF00107 Zinc-binding dehydrogenase S96127_RS07220 PF08240 Alcohol dehydrogenase GroES-like domain S96127_RS07225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS07225 PF03466 LysR substrate binding domain S96127_RS07230 PF06779 Uncharacterised MFS-type transporter YbfB S96127_RS07235 PF01227 GTP cyclohydrolase I S96127_RS07240 PF04235 Protein of unknown function (DUF418) S96127_RS07245 PF13407 Periplasmic binding protein domain S96127_RS07250 PF00005 ABC transporter S96127_RS07255 PF02653 Branched-chain amino acid transport system / permease component S96127_RS07260 PF02698 DUF218 domain S96127_RS07265 PF03949 Malic enzyme, NAD binding domain S96127_RS07265 PF00390 Malic enzyme, N-terminal domain S96127_RS07270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region S96127_RS07270 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region S96127_RS07275 PF04172 LrgB-like family S96127_RS07280 PF03788 LrgA family S96127_RS07285 PF07690 Major Facilitator Superfamily S96127_RS07310 PF01797 Transposase IS200 like S96127_RS07315 PF01588 Putative tRNA binding domain S96127_RS07315 PF09334 tRNA synthetases class I (M) S96127_RS07320 PF10609 NUBPL iron-transfer P-loop NTPase S96127_RS07325 PF00485 Phosphoribulokinase / Uridine kinase family S96127_RS07330 PF00692 dUTPase S96127_RS07335 PF05170 AsmA family S96127_RS07340 PF03741 Integral membrane protein TerC family S96127_RS07340 PF03471 Transporter associated domain S96127_RS07340 PF00571 CBS domain S96127_RS07345 PF11575 FhuF 2Fe-2S C-terminal domain S96127_RS07345 PF06276 Ferric iron reductase FhuF-like transporter S96127_RS07350 PF00282 Pyridoxal-dependent decarboxylase conserved domain S96127_RS07355 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) S96127_RS07365 PF04183 IucA / IucC family S96127_RS07365 PF06276 Ferric iron reductase FhuF-like transporter S96127_RS07370 PF00005 ABC transporter S96127_RS07375 PF01032 FecCD transport family S96127_RS07380 PF01032 FecCD transport family S96127_RS07385 PF01497 Periplasmic binding protein S96127_RS07390 PF07715 TonB-dependent Receptor Plug Domain S96127_RS07390 PF00593 TonB dependent receptor S96127_RS07390 PF07660 Secretin and TonB N terminus short domain S96127_RS07395 PF04183 IucA / IucC family S96127_RS07395 PF06276 Ferric iron reductase FhuF-like transporter S96127_RS07400 PF00483 Nucleotidyl transferase S96127_RS07405 PF00483 Nucleotidyl transferase S96127_RS07410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase S96127_RS07410 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain S96127_RS07415 PF01502 Phosphoribosyl-AMP cyclohydrolase S96127_RS07415 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase S96127_RS07420 PF00977 Histidine biosynthesis protein S96127_RS07425 PF00977 Histidine biosynthesis protein S96127_RS07430 PF00117 Glutamine amidotransferase class-I S96127_RS07435 PF00475 Imidazoleglycerol-phosphate dehydratase S96127_RS07440 PF00155 Aminotransferase class I and II S96127_RS07445 PF00815 Histidinol dehydrogenase S96127_RS07450 PF08029 HisG, C-terminal domain S96127_RS07450 PF01634 ATP phosphoribosyltransferase S96127_RS07460 PF01370 NAD dependent epimerase/dehydratase family S96127_RS07475 PF02653 Branched-chain amino acid transport system / permease component S96127_RS07480 PF00005 ABC transporter S96127_RS07485 PF00005 ABC transporter S96127_RS07490 PF00465 Iron-containing alcohol dehydrogenase S96127_RS07495 PF13520 Amino acid permease S96127_RS07505 PF00929 Exonuclease S96127_RS07505 PF08411 Exonuclease C-terminal S96127_RS07515 PF04363 Protein of unknown function (DUF496) S96127_RS07520 PF00872 Transposase, Mutator family S96127_RS07525 PF02369 Bacterial Ig-like domain (group 1) S96127_RS07525 PF11924 Inverse autotransporter, beta-domain S96127_RS07525 PF09134 Invasin, domain 3 S96127_RS07530 PF07690 Major Facilitator Superfamily S96127_RS07535 PF04134 Protein of unknown function, DUF393 S96127_RS07545 PF01557 Fumarylacetoacetate (FAA) hydrolase family S96127_RS07550 PF13378 Enolase C-terminal domain-like S96127_RS07550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain S96127_RS07555 PF01070 FMN-dependent dehydrogenase S96127_RS07560 PF00764 Arginosuccinate synthase S96127_RS07565 PF01554 MatE S96127_RS07575 PF01522 Polysaccharide deacetylase S96127_RS07585 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) S96127_RS07595 PF00072 Response regulator receiver domain S96127_RS07595 PF00196 Bacterial regulatory proteins, luxR family S96127_RS07600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component S96127_RS07610 PF03480 Bacterial extracellular solute-binding protein, family 7 S96127_RS07615 PF01648 4'-phosphopantetheinyl transferase superfamily S96127_RS07615 PF17837 4'-phosphopantetheinyl transferase N-terminal domain S96127_RS07625 PF16875 Glycosyl hydrolase family 36 N-terminal domain S96127_RS07625 PF16874 Glycosyl hydrolase family 36 C-terminal domain S96127_RS07630 PF01306 LacY proton/sugar symporter S96127_RS07635 PF00872 Transposase, Mutator family S96127_RS07645 PF00665 Integrase core domain S96127_RS07645 PF02796 Helix-turn-helix domain of resolvase S96127_RS07650 PF01695 IstB-like ATP binding protein S96127_RS07655 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family S96127_RS07655 PF00356 Bacterial regulatory proteins, lacI family S96127_RS07665 PF06167 Glucose-regulated metallo-peptidase M90 S96127_RS07680 PF00664 ABC transporter transmembrane region S96127_RS07680 PF00005 ABC transporter S96127_RS07690 PF12833 Helix-turn-helix domain S96127_RS07695 PF10964 Protein of unknown function (DUF2766) S96127_RS07700 PF13996 YobH-like protein S96127_RS07705 PF13998 MgrB protein S96127_RS07710 PF13974 YebO-like protein S96127_RS07725 PF00324 Amino acid permease S96127_RS07730 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP S96127_RS07735 PF10736 Protein of unknown function (DUF2627) S96127_RS07740 PF00313 'Cold-shock' DNA-binding domain S96127_RS07745 PF02578 Multi-copper polyphenol oxidoreductase laccase S96127_RS07750 PF13847 Methyltransferase domain S96127_RS07765 PF00593 TonB dependent receptor S96127_RS07765 PF07715 TonB-dependent Receptor Plug Domain S96127_RS07770 PF02659 Putative manganese efflux pump S96127_RS07775 PF06173 Protein of unknown function (DUF986) S96127_RS07780 PF03613 PTS system mannose/fructose/sorbose family IID component S96127_RS07785 PF03609 PTS system sorbose-specific iic component S96127_RS07790 PF03610 PTS system fructose IIA component S96127_RS07790 PF03830 PTS system sorbose subfamily IIB component S96127_RS07795 PF03741 Integral membrane protein TerC family S96127_RS07795 PF03471 Transporter associated domain S96127_RS07800 PF01047 MarR family S96127_RS07805 PF01557 Fumarylacetoacetate (FAA) hydrolase family S96127_RS07810 PF01557 Fumarylacetoacetate (FAA) hydrolase family S96127_RS07815 PF00171 Aldehyde dehydrogenase family S96127_RS07820 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase S96127_RS07825 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase S96127_RS07830 PF01557 Fumarylacetoacetate (FAA) hydrolase family S96127_RS07835 PF03328 HpcH/HpaI aldolase/citrate lyase family S96127_RS07840 PF07690 Major Facilitator Superfamily S96127_RS07845 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal S96127_RS07845 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal S96127_RS07850 PF01613 Flavin reductase like domain S96127_RS07855 PF03313 Serine dehydratase alpha chain S96127_RS07855 PF03315 Serine dehydratase beta chain S96127_RS07860 PF00293 NUDIX domain S96127_RS07865 PF04715 Anthranilate synthase component I, N terminal region S96127_RS07865 PF00425 chorismate binding enzyme S96127_RS07870 PF03701 Uncharacterised protein family (UPF0181) S96127_RS07875 PF02222 ATP-grasp domain S96127_RS07880 PF03880 DbpA RNA binding domain S96127_RS07880 PF00270 DEAD/DEAH box helicase S96127_RS07880 PF00271 Helicase conserved C-terminal domain S96127_RS07885 PF07130 YebG protein S96127_RS07890 PF04266 ASCH domain S96127_RS07895 PF13995 YebF-like protein S96127_RS07900 PF00326 Prolyl oligopeptidase family S96127_RS07900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain S96127_RS07905 PF00561 alpha/beta hydrolase fold S96127_RS07910 PF06440 DNA polymerase III, theta subunit S96127_RS07915 PF00210 Ferritin-like domain S96127_RS07920 PF04234 CopC domain S96127_RS07930 PF10709 Protein of unknown function (DUF2511) S96127_RS07945 PF01312 FlhB HrpN YscU SpaS Family S96127_RS07950 PF00771 FHIPEP family S96127_RS07955 PF06366 Flagellar protein FlhE S96127_RS07975 PF05130 FlgN protein S96127_RS07980 PF04316 Anti-sigma-28 factor, FlgM S96127_RS07985 PF13144 Chaperone for flagella basal body P-ring formation S96127_RS07985 PF17656 FlgA N-terminal domain S96127_RS07990 PF00460 Flagella basal body rod protein S96127_RS07995 PF00460 Flagella basal body rod protein S96127_RS07995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal S96127_RS08000 PF13860 FlgD Ig-like domain S96127_RS08000 PF03963 Flagellar hook capping protein - N-terminal region S96127_RS08000 PF13861 FlgD Tudor-like domain S96127_RS08005 PF07559 Flagellar basal body protein FlaE S96127_RS08005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal S96127_RS08005 PF00460 Flagella basal body rod protein S96127_RS08020 PF02107 Flagellar L-ring protein S96127_RS08025 PF02119 Flagellar P-ring protein S96127_RS08030 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase S96127_RS08030 PF10135 Rod binding protein S96127_RS08035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal S96127_RS08035 PF00460 Flagella basal body rod protein S96127_RS08040 PF00669 Bacterial flagellin N-terminal helical region S96127_RS08045 PF04198 Putative sugar-binding domain S96127_RS08050 PF00596 Class II Aldolase and Adducin N-terminal domain S96127_RS08055 PF02653 Branched-chain amino acid transport system / permease component S96127_RS08060 PF13407 Periplasmic binding protein domain S96127_RS08065 PF00005 ABC transporter S96127_RS08070 PF02653 Branched-chain amino acid transport system / permease component S96127_RS08075 PF00294 pfkB family carbohydrate kinase S96127_RS08090 PF01311 Bacterial export proteins, family 1 S96127_RS08095 PF01313 Bacterial export proteins, family 3 S96127_RS08100 PF00813 FliP family S96127_RS08105 PF04347 Flagellar biosynthesis protein, FliO S96127_RS08110 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term S96127_RS08110 PF16973 Flagellar motor switch protein FliN N-terminal S96127_RS08115 PF02154 Flagellar motor switch protein FliM S96127_RS08115 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term S96127_RS08120 PF03748 Flagellar basal body-associated protein FliL S96127_RS08125 PF02120 Flagellar hook-length control protein FliK S96127_RS08130 PF02050 Flagellar FliJ protein S96127_RS08135 PF18269 T3SS EscN ATPase C-terminal domain S96127_RS08135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain S96127_RS08140 PF02108 Flagellar assembly protein FliH S96127_RS08145 PF14842 FliG N-terminal domain S96127_RS08145 PF01706 FliG C-terminal domain S96127_RS08145 PF14841 FliG middle domain S96127_RS08150 PF01514 Secretory protein of YscJ/FliF family S96127_RS08150 PF08345 Flagellar M-ring protein C-terminal S96127_RS08155 PF02049 Flagellar hook-basal body complex protein FliE S96127_RS08175 PF00730 HhH-GPD superfamily base excision DNA repair protein S96127_RS08180 PF01966 HD domain S96127_RS08185 PF00672 HAMP domain S96127_RS08185 PF02743 Cache domain S96127_RS08185 PF00211 Adenylate and Guanylate cyclase catalytic domain S96127_RS08190 PF12833 Helix-turn-helix domain S96127_RS08195 PF05400 Flagellar protein FliT S96127_RS08200 PF02561 Flagellar protein FliS S96127_RS08205 PF02465 Flagellar hook-associated protein 2 N-terminus S96127_RS08205 PF07196 Flagellin hook IN motif S96127_RS08205 PF07195 Flagellar hook-associated protein 2 C-terminus S96127_RS08210 PF08884 Flagellin D3 domain S96127_RS08210 PF00700 Bacterial flagellin C-terminal helical region S96127_RS08210 PF00669 Bacterial flagellin N-terminal helical region S96127_RS08215 PF04545 Sigma-70, region 4 S96127_RS08215 PF04539 Sigma-70 region 3 S96127_RS08215 PF04542 Sigma-70 region 2 S96127_RS08220 PF02899 Phage integrase, N-terminal SAM-like domain S96127_RS08225 PF00291 Pyridoxal-phosphate dependent enzyme S96127_RS08230 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS08235 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS08240 PF00005 ABC transporter S96127_RS08255 PF00171 Aldehyde dehydrogenase family S96127_RS08255 PF01619 Proline dehydrogenase S96127_RS08255 PF14850 DNA-binding domain of Proline dehydrogenase S96127_RS08255 PF18327 Proline utilization A proline dehydrogenase N-terminal domain S96127_RS08265 PF00474 Sodium:solute symporter family S96127_RS08270 PF03239 Iron permease FTR1 family S96127_RS08275 PF09375 Imelysin S96127_RS08275 PF13473 Cupredoxin-like domain S96127_RS08280 PF04261 Dyp-type peroxidase family S96127_RS08285 PF03358 NADPH-dependent FMN reductase S96127_RS08290 PF01344 Kelch motif S96127_RS08295 PF00324 Amino acid permease S96127_RS08305 PF13505 Outer membrane protein beta-barrel domain S96127_RS08315 PF06942 GlpM protein S96127_RS08320 PF10769 Protein of unknown function (DUF2594) S96127_RS08325 PF00196 Bacterial regulatory proteins, luxR family S96127_RS08325 PF00072 Response regulator receiver domain S96127_RS08330 PF08459 UvrC Helix-hairpin-helix N-terminal S96127_RS08330 PF01541 GIY-YIG catalytic domain S96127_RS08330 PF02151 UvrB/uvrC motif S96127_RS08335 PF01066 CDP-alcohol phosphatidyltransferase S96127_RS08375 PF05638 Type VI secretion system effector, Hcp S96127_RS08445 PF07702 UTRA domain S96127_RS08445 PF00392 Bacterial regulatory proteins, gntR family S96127_RS08450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold S96127_RS08450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain S96127_RS08460 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS08465 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS08470 PF08402 TOBE domain S96127_RS08470 PF00005 ABC transporter S96127_RS08490 PF02796 Helix-turn-helix domain of resolvase S96127_RS08490 PF00665 Integrase core domain S96127_RS08495 PF01695 IstB-like ATP binding protein S96127_RS08505 PF14331 ImcF-related N-terminal domain S96127_RS08505 PF06761 Intracellular multiplication and human macrophage-killing S96127_RS08505 PF06744 Type VI secretion protein IcmF C-terminal S96127_RS08510 PF06715 Gp5 C-terminal repeat (3 copies) S96127_RS08510 PF04717 Type VI secretion system, phage-baseplate injector S96127_RS08525 PF07024 ImpE protein S96127_RS08540 PF08274 PhnA Zinc-Ribbon S96127_RS08540 PF03831 PhnA domain S96127_RS08550 PF04011 LemA family S96127_RS08565 PF00005 ABC transporter S96127_RS08570 PF03379 CcmB protein S96127_RS08575 PF01578 Cytochrome C assembly protein S96127_RS08580 PF04995 Heme exporter protein D (CcmD) S96127_RS08585 PF03100 CcmE S96127_RS08590 PF01578 Cytochrome C assembly protein S96127_RS08590 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal S96127_RS08595 PF08534 Redoxin S96127_RS08600 PF03918 Cytochrome C biogenesis protein S96127_RS08605 PF03918 Cytochrome C biogenesis protein S96127_RS08610 PF04333 MlaA lipoprotein S96127_RS08615 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) S96127_RS08620 PF04175 Protein of unknown function (DUF406) S96127_RS08625 PF02803 Thiolase, C-terminal domain S96127_RS08625 PF00108 Thiolase, N-terminal domain S96127_RS08630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain S96127_RS08630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain S96127_RS08630 PF00378 Enoyl-CoA hydratase/isomerase S96127_RS08635 PF00300 Histidine phosphatase superfamily (branch 1) S96127_RS08640 PF01713 Smr domain S96127_RS08645 PF05175 Methyltransferase small domain S96127_RS08650 PF01264 Chorismate synthase S96127_RS08655 PF03411 Penicillin-insensitive murein endopeptidase S96127_RS08660 PF01925 Sulfite exporter TauE/SafE S96127_RS08665 PF04315 Elongation factor P hydroxylase S96127_RS08670 PF08891 YfcL protein S96127_RS08675 PF05430 S-adenosyl-L-methionine-dependent methyltransferase S96127_RS08675 PF01266 FAD dependent oxidoreductase S96127_RS08680 PF00109 Beta-ketoacyl synthase, N-terminal domain S96127_RS08680 PF02801 Beta-ketoacyl synthase, C-terminal domain S96127_RS08685 PF01177 Asp/Glu/Hydantoin racemase S96127_RS08690 PF00419 Fimbrial protein S96127_RS08700 PF00892 EamA-like transporter family S96127_RS08710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain S96127_RS08710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain S96127_RS08710 PF11890 Domain of unknown function (DUF3410) S96127_RS08715 PF02774 Semialdehyde dehydrogenase, dimerisation domain S96127_RS08715 PF01118 Semialdehyde dehydrogenase, NAD binding domain S96127_RS08720 PF01416 tRNA pseudouridine synthase S96127_RS08725 PF09335 SNARE associated Golgi protein S96127_RS08730 PF17848 Acetyl-coA carboxylase zinc finger domain S96127_RS08730 PF01039 Carboxyl transferase domain S96127_RS08735 PF02875 Mur ligase family, glutamate ligase domain S96127_RS08735 PF08245 Mur ligase middle domain S96127_RS08740 PF05036 Sporulation related domain S96127_RS08745 PF02674 Colicin V production protein S96127_RS08750 PF00156 Phosphoribosyl transferase domain S96127_RS08755 PF02441 Flavoprotein S96127_RS08760 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS08765 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS08770 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS08775 PF00005 ABC transporter S96127_RS08780 PF01370 NAD dependent epimerase/dehydratase family S96127_RS08780 PF08338 Domain of unknown function (DUF1731) S96127_RS08790 PF12850 Calcineurin-like phosphoesterase superfamily domain S96127_RS08795 PF00293 NUDIX domain S96127_RS08800 PF03611 PTS system sugar-specific permease component S96127_RS08805 PF00872 Transposase, Mutator family S96127_RS08815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 S96127_RS08820 PF00356 Bacterial regulatory proteins, lacI family S96127_RS08820 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family S96127_RS08825 PF01515 Phosphate acetyl/butaryl transferase S96127_RS08825 PF07085 DRTGG domain S96127_RS08830 PF00871 Acetokinase family S96127_RS08835 PF04217 Protein of unknown function, DUF412 S96127_RS08840 PF03887 YfbU domain S96127_RS08845 PF13419 Haloacid dehalogenase-like hydrolase S96127_RS08850 PF03600 Citrate transporter S96127_RS08850 PF02080 TrkA-C domain S96127_RS08865 PF00155 Aminotransferase class I and II S96127_RS08870 PF03466 LysR substrate binding domain S96127_RS08870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS08875 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 S96127_RS08880 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit S96127_RS08885 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit S96127_RS08885 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit S96127_RS08895 PF10531 SLBB domain S96127_RS08895 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region S96127_RS08895 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit S96127_RS08900 PF01568 Molydopterin dinucleotide binding domain S96127_RS08900 PF00384 Molybdopterin oxidoreductase S96127_RS08900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region S96127_RS08900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain S96127_RS08905 PF00146 NADH dehydrogenase S96127_RS08910 PF12838 4Fe-4S dicluster domain S96127_RS08915 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 S96127_RS08920 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L S96127_RS08925 PF00361 Proton-conducting membrane transporter S96127_RS08925 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus S96127_RS08930 PF00361 Proton-conducting membrane transporter S96127_RS08935 PF00361 Proton-conducting membrane transporter S96127_RS08945 PF04074 YhcH/YjgK/YiaL S96127_RS08950 PF01202 Shikimate kinase S96127_RS08955 PF00106 short chain dehydrogenase S96127_RS08960 PF02638 Glycosyl hydrolase-like 10 S96127_RS08965 PF00356 Bacterial regulatory proteins, lacI family S96127_RS08970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain S96127_RS08970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain S96127_RS08975 PF07690 Major Facilitator Superfamily S96127_RS08980 PF03928 Haem-degrading S96127_RS08985 PF00920 Dehydratase family S96127_RS08995 PF05957 Bacterial protein of unknown function (DUF883) S96127_RS09005 PF00425 chorismate binding enzyme S96127_RS09010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain S96127_RS09010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain S96127_RS09010 PF16582 Middle domain of thiamine pyrophosphate S96127_RS09015 PF12697 Alpha/beta hydrolase family S96127_RS09020 PF00378 Enoyl-CoA hydratase/isomerase S96127_RS09025 PF13378 Enolase C-terminal domain-like S96127_RS09030 PF00501 AMP-binding enzyme S96127_RS09030 PF13193 AMP-binding enzyme C-terminal domain S96127_RS09035 PF02885 Glycosyl transferase family, helical bundle domain S96127_RS09040 PF07338 Protein of unknown function (DUF1471) S96127_RS09045 PF05971 RNA methyltransferase S96127_RS09055 PF01695 IstB-like ATP binding protein S96127_RS09060 PF00665 Integrase core domain S96127_RS09060 PF02796 Helix-turn-helix domain of resolvase S96127_RS09065 PF13426 PAS domain S96127_RS09065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain S96127_RS09065 PF08447 PAS fold S96127_RS09070 PF00005 ABC transporter S96127_RS09075 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS09080 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS09090 PF00210 Ferritin-like domain S96127_RS09095 PF13649 Methyltransferase domain S96127_RS09105 PF00892 EamA-like transporter family S96127_RS09110 PF13505 Outer membrane protein beta-barrel domain S96127_RS09130 PF08240 Alcohol dehydrogenase GroES-like domain S96127_RS09130 PF00107 Zinc-binding dehydrogenase S96127_RS09135 PF13407 Periplasmic binding protein domain S96127_RS09140 PF00005 ABC transporter S96127_RS09145 PF02653 Branched-chain amino acid transport system / permease component S96127_RS09150 PF00356 Bacterial regulatory proteins, lacI family S96127_RS09155 PF03466 LysR substrate binding domain S96127_RS09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS09160 PF00180 Isocitrate/isopropylmalate dehydrogenase S96127_RS09170 PF02028 BCCT, betaine/carnitine/choline family transporter S96127_RS09180 PF00111 2Fe-2S iron-sulfur cluster binding domain S96127_RS09180 PF00175 Oxidoreductase NAD-binding domain S96127_RS09180 PF00970 Oxidoreductase FAD-binding domain S96127_RS09185 PF08479 POTRA domain, ShlB-type S96127_RS09185 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB S96127_RS09185 PF17287 POTRA domain S96127_RS09190 PF05860 haemagglutination activity domain S96127_RS09190 PF04829 Pre-toxin domain with VENN motif S96127_RS09190 PF13332 Hemagglutinin repeat S96127_RS09190 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS09230 PF15526 Novel toxin 21 S96127_RS09230 PF04829 Pre-toxin domain with VENN motif S96127_RS09230 PF05594 Haemagluttinin repeat S96127_RS09230 PF05860 haemagglutination activity domain S96127_RS09230 PF13332 Hemagglutinin repeat S96127_RS09240 PF17912 MalK OB fold domain S96127_RS09240 PF00005 ABC transporter S96127_RS09245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain S96127_RS09245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III S96127_RS09245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II S96127_RS09245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I S96127_RS09250 PF00356 Bacterial regulatory proteins, lacI family S96127_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS09270 PF04041 beta-1,4-mannooligosaccharide phosphorylase S96127_RS09290 PF00924 Mechanosensitive ion channel S96127_RS09295 PF01867 CRISPR associated protein Cas1 S96127_RS09305 PF09611 CRISPR-associated protein (Cas_Csy1) S96127_RS09310 PF09614 CRISPR-associated protein (Cas_Csy2) S96127_RS09315 PF09615 CRISPR-associated protein (Cas_Csy3) S96127_RS09320 PF09618 CRISPR-associated protein (Cas_Csy4) S96127_RS09325 PF00248 Aldo/keto reductase family S96127_RS09335 PF00083 Sugar (and other) transporter S96127_RS09345 PF03466 LysR substrate binding domain S96127_RS09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS09350 PF00196 Bacterial regulatory proteins, luxR family S96127_RS09350 PF03472 Autoinducer binding domain S96127_RS09355 PF00765 Autoinducer synthase S96127_RS09370 PF00581 Rhodanese-like domain S96127_RS09370 PF12368 Rhodanase C-terminal S96127_RS09370 PF17773 UPF0176 acylphosphatase like domain S96127_RS09375 PF01594 AI-2E family transporter S96127_RS09385 PF00196 Bacterial regulatory proteins, luxR family S96127_RS09390 PF01266 FAD dependent oxidoreductase S96127_RS09395 PF00872 Transposase, Mutator family S96127_RS09400 PF00872 Transposase, Mutator family S96127_RS09420 PF08242 Methyltransferase domain S96127_RS09465 PF00672 HAMP domain S96127_RS09465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS09465 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS09470 PF00072 Response regulator receiver domain S96127_RS09470 PF00486 Transcriptional regulatory protein, C terminal S96127_RS09475 PF02129 X-Pro dipeptidyl-peptidase (S15 family) S96127_RS09515 PF06071 Protein of unknown function (DUF933) S96127_RS09515 PF01926 50S ribosome-binding GTPase S96127_RS09520 PF01195 Peptidyl-tRNA hydrolase S96127_RS09525 PF10762 Protein of unknown function (DUF2583) S96127_RS09530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase S96127_RS09530 PF14572 Phosphoribosyl synthetase-associated domain S96127_RS09535 PF00288 GHMP kinases N terminal domain S96127_RS09535 PF08544 GHMP kinases C terminal S96127_RS09540 PF03550 Outer membrane lipoprotein LolB S96127_RS09545 PF01488 Shikimate / quinate 5-dehydrogenase S96127_RS09545 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain S96127_RS09545 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain S96127_RS09550 PF00472 RF-1 domain S96127_RS09550 PF03462 PCRF domain S96127_RS09555 PF13847 Methyltransferase domain S96127_RS09555 PF17827 PrmC N-terminal domain S96127_RS09560 PF04247 Invasion gene expression up-regulator, SirB S96127_RS09565 PF13369 Transglutaminase-like superfamily S96127_RS09570 PF00793 DAHP synthetase I family S96127_RS09575 PF00916 Sulfate permease family S96127_RS09575 PF01740 STAS domain S96127_RS09585 PF03009 Glycerophosphoryl diester phosphodiesterase family S96127_RS09595 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS09600 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS09605 PF08402 TOBE domain S96127_RS09605 PF00005 ABC transporter S96127_RS09620 PF03009 Glycerophosphoryl diester phosphodiesterase family S96127_RS09625 PF00480 ROK family S96127_RS09625 PF01325 Iron dependent repressor, N-terminal DNA binding domain S96127_RS09635 PF02811 PHP domain S96127_RS09640 PF02613 Nitrate reductase delta subunit S96127_RS09645 PF07273 Protein of unknown function (DUF1439) S96127_RS09650 PF07690 Major Facilitator Superfamily S96127_RS09655 PF13302 Acetyltransferase (GNAT) domain S96127_RS09660 PF04337 Protein of unknown function, DUF480 S96127_RS09665 PF03023 Lipid II flippase MurJ S96127_RS09670 PF17287 POTRA domain S96127_RS09670 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB S96127_RS09670 PF08479 POTRA domain, ShlB-type S96127_RS09675 PF13332 Hemagglutinin repeat S96127_RS09675 PF05860 haemagglutination activity domain S96127_RS09680 PF05746 DALR anticodon binding domain S96127_RS09680 PF03485 Arginyl tRNA synthetase N terminal domain S96127_RS09680 PF00750 tRNA synthetases class I (R) S96127_RS09685 PF06185 YecM protein S96127_RS09690 PF03932 CutC family S96127_RS09695 PF08003 Protein of unknown function (DUF1698) S96127_RS09700 PF13649 Methyltransferase domain S96127_RS09705 PF01124 MAPEG family S96127_RS09710 PF01904 Protein of unknown function DUF72 S96127_RS09715 PF02938 GAD domain S96127_RS09715 PF00152 tRNA synthetases class II (D, K and N) S96127_RS09715 PF01336 OB-fold nucleic acid binding domain S96127_RS09720 PF00293 NUDIX domain S96127_RS09725 PF01709 Transcriptional regulator S96127_RS09730 PF02075 Crossover junction endodeoxyribonuclease RuvC S96127_RS09735 PF01330 RuvA N terminal domain S96127_RS09735 PF07499 RuvA, C-terminal domain S96127_RS09740 PF05496 Holliday junction DNA helicase RuvB P-loop domain S96127_RS09740 PF05491 RuvB C-terminal winged helix domain S96127_RS09740 PF17864 RuvB AAA lid domain S96127_RS09745 PF00950 ABC 3 transport family S96127_RS09750 PF00005 ABC transporter S96127_RS09755 PF01297 Zinc-uptake complex component A periplasmic S96127_RS09760 PF01476 LysM domain S96127_RS09760 PF08525 Opacity-associated protein A N-terminal motif S96127_RS09760 PF01551 Peptidase family M23 S96127_RS09765 PF03279 Bacterial lipid A biosynthesis acyltransferase S96127_RS09775 PF00224 Pyruvate kinase, barrel domain S96127_RS09775 PF02887 Pyruvate kinase, alpha/beta domain S96127_RS09780 PF01380 SIS domain S96127_RS09780 PF01418 Helix-turn-helix domain, rpiR family S96127_RS09785 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain S96127_RS09785 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain S96127_RS09790 PF01081 KDPG and KHG aldolase S96127_RS09795 PF00893 Small Multidrug Resistance protein S96127_RS09800 PF00893 Small Multidrug Resistance protein S96127_RS09805 PF01042 Endoribonuclease L-PSP S96127_RS09810 PF13307 Helicase C-terminal domain S96127_RS09810 PF04851 Type III restriction enzyme, res subunit S96127_RS09815 PF00814 Glycoprotease family S96127_RS09820 PF03843 Outer membrane lipoprotein Slp family S96127_RS09830 PF13193 AMP-binding enzyme C-terminal domain S96127_RS09830 PF00501 AMP-binding enzyme S96127_RS09835 PF00570 HRDC domain S96127_RS09835 PF01612 3'-5' exonuclease S96127_RS09840 PF03776 Septum formation topological specificity factor MinE S96127_RS09845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain S96127_RS09850 PF03775 Septum formation inhibitor MinC, C-terminal domain S96127_RS09850 PF05209 Septum formation inhibitor MinC, N-terminal domain S96127_RS09855 PF05166 YcgL domain S96127_RS09860 PF13406 Transglycosylase SLT domain S96127_RS09865 PF01557 Fumarylacetoacetate (FAA) hydrolase family S96127_RS09870 PF03692 Putative zinc- or iron-chelating domain S96127_RS09875 PF00589 Phage integrase family S96127_RS09875 PF12167 Arm DNA-binding domain S96127_RS09880 PF02796 Helix-turn-helix domain of resolvase S96127_RS09880 PF00665 Integrase core domain S96127_RS09885 PF01695 IstB-like ATP binding protein S96127_RS09900 PF05772 NinB protein S96127_RS09910 PF06530 Phage antitermination protein Q S96127_RS09975 PF00872 Transposase, Mutator family S96127_RS10060 PF01797 Transposase IS200 like S96127_RS10135 PF02413 Caudovirales tail fibre assembly protein, lambda gpK S96127_RS10140 PF00872 Transposase, Mutator family S96127_RS10150 PF00266 Aminotransferase class-V S96127_RS10165 PF02600 Disulfide bond formation protein DsbB S96127_RS10170 PF06450 Bacterial Na+/H+ antiporter B (NhaB) S96127_RS10175 PF00392 Bacterial regulatory proteins, gntR family S96127_RS10175 PF07840 FadR C-terminal domain S96127_RS10180 PF04293 SpoVR like protein S96127_RS10185 PF01266 FAD dependent oxidoreductase S96127_RS10190 PF07690 Major Facilitator Superfamily S96127_RS10195 PF05726 Pirin C-terminal cupin domain S96127_RS10195 PF02678 Pirin S96127_RS10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS10200 PF03466 LysR substrate binding domain S96127_RS10210 PF04285 Protein of unknown function (DUF444) S96127_RS10215 PF08298 PrkA AAA domain S96127_RS10215 PF06798 PrkA serine protein kinase C-terminal domain S96127_RS10220 PF06629 MltA-interacting protein MipA S96127_RS10225 PF01263 Aldose 1-epimerase S96127_RS10230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain S96127_RS10230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain S96127_RS10235 PF01641 SelR domain S96127_RS10240 PF07023 Protein of unknown function (DUF1315) S96127_RS10245 PF00857 Isochorismatase family S96127_RS10250 PF00710 Asparaginase, N-terminal S96127_RS10250 PF17763 Glutaminase/Asparaginase C-terminal domain S96127_RS10255 PF01343 Peptidase family S49 S96127_RS10260 PF00881 Nitroreductase family S96127_RS10265 PF02769 AIR synthase related protein, C-terminal domain S96127_RS10265 PF00586 AIR synthase related protein, N-terminal domain S96127_RS10270 PF01751 Toprim domain S96127_RS10270 PF01131 DNA topoisomerase S96127_RS10275 PF07383 Protein of unknown function (DUF1496) S96127_RS10280 PF00293 NUDIX domain S96127_RS10285 PF03372 Endonuclease/Exonuclease/phosphatase family S96127_RS10290 PF03466 LysR substrate binding domain S96127_RS10290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS10310 PF00872 Transposase, Mutator family S96127_RS10315 PF00551 Formyl transferase S96127_RS10315 PF01842 ACT domain S96127_RS10320 PF02810 SEC-C motif S96127_RS10325 PF00072 Response regulator receiver domain S96127_RS10330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain S96127_RS10330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain S96127_RS10330 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain S96127_RS10335 PF00816 H-NS histone family S96127_RS10340 PF00265 Thymidine kinase S96127_RS10345 PF01695 IstB-like ATP binding protein S96127_RS10350 PF02796 Helix-turn-helix domain of resolvase S96127_RS10350 PF00665 Integrase core domain S96127_RS10355 PF00171 Aldehyde dehydrogenase family S96127_RS10355 PF00465 Iron-containing alcohol dehydrogenase S96127_RS10360 PF01914 MarC family integral membrane protein S96127_RS10365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle S96127_RS10370 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS10375 PF12911 N-terminal TM domain of oligopeptide transport permease C S96127_RS10375 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS10380 PF00005 ABC transporter S96127_RS10380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region S96127_RS10385 PF00005 ABC transporter S96127_RS10385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region S96127_RS10395 PF04269 Protein of unknown function, DUF440 S96127_RS10400 PF13396 Phospholipase_D-nuclease N-terminal S96127_RS10400 PF13091 PLD-like domain S96127_RS10415 PF13505 Outer membrane protein beta-barrel domain S96127_RS10430 PF03795 YCII-related domain S96127_RS10435 PF03544 Gram-negative bacterial TonB protein C-terminal S96127_RS10440 PF00872 Transposase, Mutator family S96127_RS10445 PF03061 Thioesterase superfamily S96127_RS10450 PF04279 Intracellular septation protein A S96127_RS10475 PF03922 OmpW family S96127_RS10485 PF00290 Tryptophan synthase alpha chain S96127_RS10490 PF00291 Pyridoxal-phosphate dependent enzyme S96127_RS10495 PF00218 Indole-3-glycerol phosphate synthase S96127_RS10495 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase S96127_RS10500 PF00591 Glycosyl transferase family, a/b domain S96127_RS10500 PF02885 Glycosyl transferase family, helical bundle domain S96127_RS10505 PF00117 Glutamine amidotransferase class-I S96127_RS10510 PF04715 Anthranilate synthase component I, N terminal region S96127_RS10510 PF00425 chorismate binding enzyme S96127_RS10520 PF02811 PHP domain S96127_RS10525 PF01300 Telomere recombination S96127_RS10530 PF00849 RNA pseudouridylate synthase S96127_RS10530 PF01479 S4 domain S96127_RS10535 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP S96127_RS10540 PF00106 short chain dehydrogenase S96127_RS10545 PF01343 Peptidase family S49 S96127_RS10545 PF08496 Peptidase family S49 N-terminal S96127_RS10550 PF10692 Protein of unknown function (DUF2498) S96127_RS10560 PF01396 Topoisomerase DNA binding C4 zinc finger S96127_RS10560 PF01751 Toprim domain S96127_RS10560 PF01131 DNA topoisomerase S96127_RS10560 PF08272 Topoisomerase I zinc-ribbon-like S96127_RS10565 PF03466 LysR substrate binding domain S96127_RS10565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS10575 PF00330 Aconitase family (aconitate hydratase) S96127_RS10575 PF00694 Aconitase C-terminal domain S96127_RS10580 PF00925 GTP cyclohydrolase II S96127_RS10585 PF01569 PAP2 superfamily S96127_RS10590 PF06305 Lipopolysaccharide assembly protein A domain S96127_RS10595 PF18073 Rubredoxin metal binding domain S96127_RS10605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family S96127_RS10610 PF01253 Translation initiation factor SUI1 S96127_RS10615 PF05433 Glycine zipper 2TM domain S96127_RS10630 PF00923 Transaldolase/Fructose-6-phosphate aldolase S96127_RS10635 PF04328 Selenoprotein, putative S96127_RS10640 PF02554 Carbon starvation protein CstA S96127_RS10640 PF13722 5TM C-terminal transporter carbon starvation CstA S96127_RS10645 PF00575 S1 RNA binding domain S96127_RS10645 PF17876 Cold shock domain S96127_RS10645 PF08206 Ribonuclease B OB domain S96127_RS10645 PF00773 RNB domain S96127_RS10650 PF07690 Major Facilitator Superfamily S96127_RS10655 PF01370 NAD dependent epimerase/dehydratase family S96127_RS10660 PF10576 Iron-sulfur binding domain of endonuclease III S96127_RS10660 PF00633 Helix-hairpin-helix motif S96127_RS10660 PF00730 HhH-GPD superfamily base excision DNA repair protein S96127_RS10665 PF02508 Rnf-Nqr subunit, membrane protein S96127_RS10670 PF04205 FMN-binding domain S96127_RS10675 PF03116 NQR2, RnfD, RnfE family S96127_RS10680 PF12833 Helix-turn-helix domain S96127_RS10680 PF06445 GyrI-like small molecule binding domain S96127_RS10685 PF13237 4Fe-4S dicluster domain S96127_RS10685 PF13375 RnfC Barrel sandwich hybrid domain S96127_RS10685 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit S96127_RS10685 PF10531 SLBB domain S96127_RS10690 PF04060 Putative Fe-S cluster S96127_RS10695 PF02508 Rnf-Nqr subunit, membrane protein S96127_RS10700 PF10754 Protein of unknown function (DUF2569) S96127_RS10705 PF00664 ABC transporter transmembrane region S96127_RS10705 PF03412 Peptidase C39 family S96127_RS10705 PF00005 ABC transporter S96127_RS10710 PF00664 ABC transporter transmembrane region S96127_RS10710 PF00005 ABC transporter S96127_RS10715 PF13533 Biotin-lipoyl like S96127_RS10725 PF00005 ABC transporter S96127_RS10725 PF00664 ABC transporter transmembrane region S96127_RS10725 PF03412 Peptidase C39 family S96127_RS10730 PF02610 L-arabinose isomerase S96127_RS10730 PF11762 L-arabinose isomerase C-terminal domain S96127_RS10735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain S96127_RS10740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family S96127_RS10745 PF00005 ABC transporter S96127_RS10750 PF02653 Branched-chain amino acid transport system / permease component S96127_RS10755 PF02311 AraC-like ligand binding domain S96127_RS10755 PF12833 Helix-turn-helix domain S96127_RS10760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain S96127_RS10760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold S96127_RS10765 PF13593 SBF-like CPA transporter family (DUF4137) S96127_RS10775 PF06097 Bacterial protein of unknown function (DUF945) S96127_RS10780 PF01238 Phosphomannose isomerase type I S96127_RS10785 PF10415 Fumarase C C-terminus S96127_RS10785 PF00206 Lyase S96127_RS10790 PF05472 DNA replication terminus site-binding protein (Ter protein) S96127_RS10795 PF07690 Major Facilitator Superfamily S96127_RS10800 PF03466 LysR substrate binding domain S96127_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS10805 PF00480 ROK family S96127_RS10815 PF00654 Voltage gated chloride channel S96127_RS10820 PF00356 Bacterial regulatory proteins, lacI family S96127_RS10830 PF13407 Periplasmic binding protein domain S96127_RS10835 PF09084 NMT1/THI5 like S96127_RS10840 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS10845 PF00005 ABC transporter S96127_RS10850 PF01048 Phosphorylase superfamily S96127_RS10850 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus S96127_RS10880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain S96127_RS10880 PF00205 Thiamine pyrophosphate enzyme, central domain S96127_RS10880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain S96127_RS10885 PF01842 ACT domain S96127_RS10890 PF13419 Haloacid dehalogenase-like hydrolase S96127_RS10900 PF00245 Alkaline phosphatase S96127_RS10905 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain S96127_RS10905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain S96127_RS10910 PF00027 Cyclic nucleotide-binding domain S96127_RS10910 PF13545 Crp-like helix-turn-helix domain S96127_RS10915 PF00582 Universal stress protein family S96127_RS10920 PF02233 NAD(P) transhydrogenase beta subunit S96127_RS10925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain S96127_RS10925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain S96127_RS10925 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch S96127_RS10930 PF07338 Protein of unknown function (DUF1471) S96127_RS10935 PF13520 Amino acid permease S96127_RS10945 PF00072 Response regulator receiver domain S96127_RS10945 PF00486 Transcriptional regulatory protein, C terminal S96127_RS10950 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS10950 PF00672 HAMP domain S96127_RS10955 PF02074 Carboxypeptidase Taq (M32) metallopeptidase S96127_RS10985 PF00089 Trypsin S96127_RS11000 PF11898 Domain of unknown function (DUF3418) S96127_RS11000 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold S96127_RS11000 PF04408 Helicase associated domain (HA2) S96127_RS11000 PF00271 Helicase conserved C-terminal domain S96127_RS11000 PF00270 DEAD/DEAH box helicase S96127_RS11005 PF02525 Flavodoxin-like fold S96127_RS11010 PF00325 Bacterial regulatory proteins, crp family S96127_RS11010 PF04198 Putative sugar-binding domain S96127_RS11015 PF08125 Mannitol dehydrogenase C-terminal domain S96127_RS11015 PF01232 Mannitol dehydrogenase Rossmann domain S96127_RS11020 PF07027 Protein of unknown function (DUF1318) S96127_RS11025 PF13617 YnbE-like lipoprotein S96127_RS11030 PF11739 Dicarboxylate transport S96127_RS11035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain S96127_RS11035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain S96127_RS11040 PF03724 META domain S96127_RS11045 PF03891 Domain of unknown function (DUF333) S96127_RS11050 PF02308 MgtC family S96127_RS11055 PF00893 Small Multidrug Resistance protein S96127_RS11060 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase S96127_RS11060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain S96127_RS11060 PF10371 Domain of unknown function S96127_RS11060 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II S96127_RS11060 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg S96127_RS11065 PF01171 PP-loop family S96127_RS11070 PF07859 alpha/beta hydrolase fold S96127_RS11080 PF01544 CorA-like Mg2+ transporter protein S96127_RS11085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle S96127_RS11090 PF00246 Zinc carboxypeptidase S96127_RS11095 PF13378 Enolase C-terminal domain-like S96127_RS11095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain S96127_RS11100 PF08534 Redoxin S96127_RS11105 PF01797 Transposase IS200 like S96127_RS11110 PF00158 Sigma-54 interaction domain S96127_RS11110 PF18024 Helix-turn-helix domain S96127_RS11115 PF09722 Protein of unknown function (DUF2384) S96127_RS11120 PF08808 RES domain S96127_RS11125 PF05128 Domain of unknown function (DUF697) S96127_RS11130 PF04317 YcjX-like family, DUF463 S96127_RS11140 PF04024 PspC domain S96127_RS11145 PF06667 Phage shock protein B S96127_RS11150 PF04012 PspA/IM30 family S96127_RS11155 PF02954 Bacterial regulatory protein, Fis family S96127_RS11155 PF00158 Sigma-54 interaction domain S96127_RS11160 PF01797 Transposase IS200 like S96127_RS11165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle S96127_RS11170 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS11175 PF12911 N-terminal TM domain of oligopeptide transport permease C S96127_RS11180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region S96127_RS11180 PF00005 ABC transporter S96127_RS11185 PF00005 ABC transporter S96127_RS11195 PF00854 POT family S96127_RS11200 PF04893 Yip1 domain S96127_RS11205 PF11656 YjbD family (DUF3811) S96127_RS11215 PF08543 Phosphomethylpyrimidine kinase S96127_RS11220 PF00579 tRNA synthetases class I (W and Y) S96127_RS11220 PF01479 S4 domain S96127_RS11225 PF01243 Pyridoxamine 5'-phosphate oxidase S96127_RS11225 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region S96127_RS11230 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme S96127_RS11235 PF03702 Anhydro-N-acetylmuramic acid kinase S96127_RS11240 PF05433 Glycine zipper 2TM domain S96127_RS11245 PF01047 MarR family S96127_RS11250 PF00884 Sulfatase S96127_RS11250 PF08019 Phosphoethanolamine transferase EptA/EptB S96127_RS11255 PF00440 Bacterial regulatory proteins, tetR family S96127_RS11255 PF16925 Tetracyclin repressor-like, C-terminal domain S96127_RS11260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family S96127_RS11265 PF14431 YwqJ-like deaminase S96127_RS11265 PF18807 Tripartite Tc toxins repeat S96127_RS11270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily S96127_RS11275 PF00929 Exonuclease S96127_RS11285 PF00462 Glutaredoxin S96127_RS11290 PF00877 NlpC/P60 family S96127_RS11295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain S96127_RS11295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain S96127_RS11305 PF00356 Bacterial regulatory proteins, lacI family S96127_RS11310 PF03466 LysR substrate binding domain S96127_RS11310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS11315 PF07690 Major Facilitator Superfamily S96127_RS11325 PF00677 Lumazine binding domain S96127_RS11335 PF01554 MatE S96127_RS11350 PF00224 Pyruvate kinase, barrel domain S96127_RS11350 PF02887 Pyruvate kinase, alpha/beta domain S96127_RS11355 PF04728 Lipoprotein leucine-zipper S96127_RS11360 PF01367 5'-3' exonuclease, C-terminal SAM fold S96127_RS11360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain S96127_RS11365 PF00665 Integrase core domain S96127_RS11365 PF02796 Helix-turn-helix domain of resolvase S96127_RS11370 PF01695 IstB-like ATP binding protein S96127_RS11380 PF03734 L,D-transpeptidase catalytic domain S96127_RS11380 PF17969 L,D-transpeptidase C-terminal domain S96127_RS11380 PF01476 LysM domain S96127_RS11385 PF02657 Fe-S metabolism associated domain S96127_RS11390 PF00266 Aminotransferase class-V S96127_RS11395 PF01458 Uncharacterized protein family (UPF0051) S96127_RS11400 PF00005 ABC transporter S96127_RS11405 PF01458 Uncharacterized protein family (UPF0051) S96127_RS11410 PF01521 Iron-sulphur cluster biosynthesis S96127_RS11415 PF03061 Thioesterase superfamily S96127_RS11420 PF02913 FAD linked oxidases, C-terminal domain S96127_RS11420 PF01565 FAD binding domain S96127_RS11420 PF13183 4Fe-4S dicluster domain S96127_RS11425 PF01594 AI-2E family transporter S96127_RS11435 PF00391 PEP-utilising enzyme, mobile domain S96127_RS11435 PF02896 PEP-utilising enzyme, TIM barrel domain S96127_RS11435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain S96127_RS11440 PF03618 Kinase/pyrophosphorylase S96127_RS11445 PF00793 DAHP synthetase I family S96127_RS11455 PF10437 Bacterial lipoate protein ligase C-terminus S96127_RS11455 PF03099 Biotin/lipoate A/B protein ligase family S96127_RS11460 PF00877 NlpC/P60 family S96127_RS11475 PF00892 EamA-like transporter family S96127_RS11480 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase S96127_RS11485 PF01522 Polysaccharide deacetylase S96127_RS11490 PF01370 NAD dependent epimerase/dehydratase family S96127_RS11490 PF02911 Formyl transferase, C-terminal domain S96127_RS11490 PF00551 Formyl transferase S96127_RS11495 PF00535 Glycosyl transferase family 2 S96127_RS11500 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family S96127_RS11505 PF00005 ABC transporter S96127_RS11510 PF00255 Glutathione peroxidase S96127_RS11515 PF01032 FecCD transport family S96127_RS11525 PF00216 Bacterial DNA-binding protein S96127_RS11530 PF03483 B3/4 domain S96127_RS11530 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain S96127_RS11530 PF01588 Putative tRNA binding domain S96127_RS11530 PF03147 Ferredoxin-fold anticodon binding domain S96127_RS11530 PF03484 tRNA synthetase B5 domain S96127_RS11535 PF01409 tRNA synthetases class II core domain (F) S96127_RS11535 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain S96127_RS11545 PF00453 Ribosomal protein L20 S96127_RS11550 PF01632 Ribosomal protein L35 S96127_RS11555 PF00707 Translation initiation factor IF-3, C-terminal domain S96127_RS11555 PF05198 Translation initiation factor IF-3, N-terminal domain S96127_RS11560 PF02824 TGS domain S96127_RS11560 PF03129 Anticodon binding domain S96127_RS11560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) S96127_RS11560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain S96127_RS11565 PF13619 KTSC domain S96127_RS11575 PF01914 MarC family integral membrane protein S96127_RS11580 PF01464 Transglycosylase SLT domain S96127_RS11585 PF01297 Zinc-uptake complex component A periplasmic S96127_RS11590 PF00005 ABC transporter S96127_RS11595 PF00950 ABC 3 transport family S96127_RS11600 PF00950 ABC 3 transport family S96127_RS11610 PF03881 Fructosamine kinase S96127_RS11615 PF14002 YniB-like protein S96127_RS11620 PF13419 Haloacid dehalogenase-like hydrolase S96127_RS11625 PF00872 Transposase, Mutator family S96127_RS11630 PF07883 Cupin domain S96127_RS11635 PF04962 KduI/IolB family S96127_RS11645 PF06917 Periplasmic pectate lyase S96127_RS11650 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS11655 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS11660 PF03459 TOBE domain S96127_RS11660 PF17912 MalK OB fold domain S96127_RS11660 PF00005 ABC transporter S96127_RS11665 PF01547 Bacterial extracellular solute-binding protein S96127_RS11670 PF06178 Oligogalacturonate-specific porin protein (KdgM) S96127_RS11675 PF04307 LexA-binding, inner membrane-associated putative hydrolase S96127_RS11680 PF00375 Sodium:dicarboxylate symporter family S96127_RS11685 PF01510 N-acetylmuramoyl-L-alanine amidase S96127_RS11690 PF09339 IclR helix-turn-helix domain S96127_RS11690 PF01614 Bacterial transcriptional regulator S96127_RS11695 PF14583 Oligogalacturonate lyase S96127_RS11700 PF07690 Major Facilitator Superfamily S96127_RS11705 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS11705 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS11715 PF13954 PapC N-terminal domain S96127_RS11715 PF13953 PapC C-terminal domain S96127_RS11715 PF00577 Outer membrane usher protein S96127_RS11720 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS11720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS11725 PF00419 Fimbrial protein S96127_RS11730 PF01435 Peptidase family M48 S96127_RS11735 PF17804 Tail specific protease N-terminal domain S96127_RS11735 PF11818 C-terminal domain of tail specific protease (DUF3340) S96127_RS11735 PF03572 Peptidase family S41 S96127_RS11735 PF00595 PDZ domain S96127_RS11740 PF17516 ProQ C-terminal domain S96127_RS11740 PF04352 ProQ/FINO family S96127_RS11745 PF13185 GAF domain S96127_RS11750 PF04403 Paraquat-inducible protein A S96127_RS11755 PF02470 MlaD protein S96127_RS11775 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS11775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS11790 PF07351 Protein of unknown function (DUF1480) S96127_RS11800 PF00665 Integrase core domain S96127_RS11800 PF02796 Helix-turn-helix domain of resolvase S96127_RS11805 PF01695 IstB-like ATP binding protein S96127_RS11830 PF00842 Alanine racemase, C-terminal domain S96127_RS11830 PF01168 Alanine racemase, N-terminal domain S96127_RS11840 PF05658 Head domain of trimeric autotransporter adhesin S96127_RS11840 PF03895 YadA-like membrane anchor domain S96127_RS11840 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS11840 PF05662 Coiled stalk of trimeric autotransporter adhesin S96127_RS11845 PF05658 Head domain of trimeric autotransporter adhesin S96127_RS11845 PF03895 YadA-like membrane anchor domain S96127_RS11845 PF05662 Coiled stalk of trimeric autotransporter adhesin S96127_RS11845 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS11850 PF01510 N-acetylmuramoyl-L-alanine amidase S96127_RS11855 PF04344 Chemotaxis phosphatase, CheZ S96127_RS11860 PF00072 Response regulator receiver domain S96127_RS11865 PF00072 Response regulator receiver domain S96127_RS11865 PF01339 CheB methylesterase S96127_RS11870 PF01739 CheR methyltransferase, SAM binding domain S96127_RS11870 PF03705 CheR methyltransferase, all-alpha domain S96127_RS11875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain S96127_RS11875 PF00672 HAMP domain S96127_RS11875 PF02203 Tar ligand binding domain homologue S96127_RS11880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain S96127_RS11880 PF02203 Tar ligand binding domain homologue S96127_RS11880 PF00672 HAMP domain S96127_RS11895 PF12951 Passenger-associated-transport-repeat S96127_RS11900 PF13309 HTH domain S96127_RS11900 PF08348 YheO-like PAS domain S96127_RS11910 PF01042 Endoribonuclease L-PSP S96127_RS11915 PF07690 Major Facilitator Superfamily S96127_RS11920 PF01584 CheW-like domain S96127_RS11925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS11925 PF02895 Signal transducing histidine kinase, homodimeric domain S96127_RS11925 PF09078 CheY binding S96127_RS11925 PF01584 CheW-like domain S96127_RS11925 PF01627 Hpt domain S96127_RS11930 PF13677 Membrane MotB of proton-channel complex MotA/MotB S96127_RS11930 PF00691 OmpA family S96127_RS11935 PF01618 MotA/TolQ/ExbB proton channel family S96127_RS11940 PF05280 Flagellar transcriptional activator (FlhC) S96127_RS11950 PF00689 Cation transporting ATPase, C-terminus S96127_RS11950 PF00690 Cation transporter/ATPase, N-terminus S96127_RS11955 PF02308 MgtC family S96127_RS11965 PF10781 Dextransucrase DSRB S96127_RS11970 PF00313 'Cold-shock' DNA-binding domain S96127_RS11975 PF02836 Glycosyl hydrolases family 2, TIM barrel domain S96127_RS11975 PF00703 Glycosyl hydrolases family 2 S96127_RS11975 PF16353 Domain of unknown function(DUF4981) S96127_RS11975 PF02837 Glycosyl hydrolases family 2, sugar binding domain S96127_RS11975 PF02929 Beta galactosidase small chain S96127_RS11980 PF14765 Polyketide synthase dehydratase S96127_RS11980 PF00550 Phosphopantetheine attachment site S96127_RS11980 PF02801 Beta-ketoacyl synthase, C-terminal domain S96127_RS11980 PF00109 Beta-ketoacyl synthase, N-terminal domain S96127_RS11980 PF08659 KR domain S96127_RS11980 PF00107 Zinc-binding dehydrogenase S96127_RS11980 PF08240 Alcohol dehydrogenase GroES-like domain S96127_RS11980 PF16197 Ketoacyl-synthetase C-terminal extension S96127_RS11980 PF00698 Acyl transferase domain S96127_RS11985 PF10777 Inner membrane protein YlaC S96127_RS11995 PF01037 Lrp/AsnC ligand binding domain S96127_RS11995 PF13404 AsnC-type helix-turn-helix domain S96127_RS12005 PF14001 YdfZ protein S96127_RS12010 PF00328 Histidine phosphatase superfamily (branch 2) S96127_RS12020 PF01638 HxlR-like helix-turn-helix S96127_RS12025 PF05368 NmrA-like family S96127_RS12030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain S96127_RS12030 PF08447 PAS fold S96127_RS12040 PF00356 Bacterial regulatory proteins, lacI family S96127_RS12040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family S96127_RS12045 PF00180 Isocitrate/isopropylmalate dehydrogenase S96127_RS12050 PF00849 RNA pseudouridylate synthase S96127_RS12055 PF00293 NUDIX domain S96127_RS12065 PF04356 Protein of unknown function (DUF489) S96127_RS12070 PF00206 Lyase S96127_RS12070 PF08328 Adenylosuccinate lyase C-terminal S96127_RS12080 PF00486 Transcriptional regulatory protein, C terminal S96127_RS12080 PF00072 Response regulator receiver domain S96127_RS12085 PF08918 PhoQ Sensor S96127_RS12085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS12090 PF08007 Cupin superfamily protein S96127_RS12095 PF07687 Peptidase dimerisation domain S96127_RS12095 PF01546 Peptidase family M20/M25/M40 S96127_RS12100 PF02146 Sir2 family S96127_RS12105 PF00480 ROK family S96127_RS12110 PF00480 ROK family S96127_RS12115 PF12704 MacB-like periplasmic core domain S96127_RS12115 PF02687 FtsX-like permease family S96127_RS12120 PF00005 ABC transporter S96127_RS12125 PF12704 MacB-like periplasmic core domain S96127_RS12125 PF02687 FtsX-like permease family S96127_RS12130 PF17757 UvrB interaction domain S96127_RS12130 PF02559 CarD-like/TRCF domain S96127_RS12130 PF00271 Helicase conserved C-terminal domain S96127_RS12130 PF03461 TRCF domain S96127_RS12130 PF00270 DEAD/DEAH box helicase S96127_RS12135 PF05433 Glycine zipper 2TM domain S96127_RS12140 PF00872 Transposase, Mutator family S96127_RS12155 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS12160 PF05728 Uncharacterised protein family (UPF0227) S96127_RS12165 PF00933 Glycosyl hydrolase family 3 N terminal domain S96127_RS12170 PF01636 Phosphotransferase enzyme family S96127_RS12175 PF08139 Prokaryotic membrane lipoprotein lipid attachment site S96127_RS12175 PF13036 Peptidoglycan-synthase activator LpoB S96127_RS12180 PF07233 Protein of unknown function (DUF1425) S96127_RS12185 PF01230 HIT domain S96127_RS12190 PF08501 Shikimate dehydrogenase substrate binding domain S96127_RS12200 PF02378 Phosphotransferase system, EIIC S96127_RS12200 PF00367 phosphotransferase system, EIIB S96127_RS12205 PF01026 TatD related DNase S96127_RS12210 PF09115 DNA polymerase III, delta subunit, C terminal S96127_RS12215 PF02223 Thymidylate kinase S96127_RS12220 PF02618 YceG-like family S96127_RS12225 PF01063 Amino-transferase class IV S96127_RS12235 PF00109 Beta-ketoacyl synthase, N-terminal domain S96127_RS12235 PF02801 Beta-ketoacyl synthase, C-terminal domain S96127_RS12240 PF00550 Phosphopantetheine attachment site S96127_RS12250 PF00698 Acyl transferase domain S96127_RS12255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal S96127_RS12255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III S96127_RS12260 PF02504 Fatty acid synthesis protein S96127_RS12265 PF01783 Ribosomal L32p protein family S96127_RS12270 PF02620 Large ribosomal RNA subunit accumulation protein YceD S96127_RS12275 PF02545 Maf-like protein S96127_RS12280 PF01479 S4 domain S96127_RS12280 PF00849 RNA pseudouridylate synthase S96127_RS12285 PF12111 Polyribonucleotide phosphorylase C terminal S96127_RS12285 PF10150 Ribonuclease E/G family S96127_RS12285 PF00575 S1 RNA binding domain S96127_RS12290 PF00872 Transposase, Mutator family S96127_RS12300 PF03992 Antibiotic biosynthesis monooxygenase S96127_RS12305 PF01979 Amidohydrolase family S96127_RS12310 PF06183 DinI-like family S96127_RS12315 PF13991 BssS protein family S96127_RS12320 PF00872 Transposase, Mutator family S96127_RS12365 PF01370 NAD dependent epimerase/dehydratase family S96127_RS12370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal S96127_RS12370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III S96127_RS12375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III S96127_RS12375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal S96127_RS12385 PF05962 HutD S96127_RS12390 PF01979 Amidohydrolase family S96127_RS12395 PF07702 UTRA domain S96127_RS12395 PF00392 Bacterial regulatory proteins, gntR family S96127_RS12400 PF01979 Amidohydrolase family S96127_RS12415 PF01695 IstB-like ATP binding protein S96127_RS12420 PF00665 Integrase core domain S96127_RS12420 PF02796 Helix-turn-helix domain of resolvase S96127_RS12430 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family S96127_RS12435 PF04996 Succinylarginine dihydrolase S96127_RS12440 PF00171 Aldehyde dehydrogenase family S96127_RS12445 PF04958 Arginine N-succinyltransferase beta subunit S96127_RS12450 PF00202 Aminotransferase class-III S96127_RS12455 PF00392 Bacterial regulatory proteins, gntR family S96127_RS12455 PF00155 Aminotransferase class I and II S96127_RS12465 PF07730 Histidine kinase S96127_RS12465 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term S96127_RS12465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS12465 PF00672 HAMP domain S96127_RS12470 PF01699 Sodium/calcium exchanger protein S96127_RS12475 PF02562 PhoH-like protein S96127_RS12490 PF13994 PgaD-like protein S96127_RS12495 PF00535 Glycosyl transferase family 2 S96127_RS12500 PF01522 Polysaccharide deacetylase S96127_RS12500 PF14883 Hypothetical glycosyl hydrolase family 13 S96127_RS12510 PF00557 Metallopeptidase family M24 S96127_RS12515 PF03848 Tellurite resistance protein TehB S96127_RS12515 PF09313 Domain of unknown function (DUF1971) S96127_RS12525 PF00578 AhpC/TSA family S96127_RS12530 PF12704 MacB-like periplasmic core domain S96127_RS12530 PF02687 FtsX-like permease family S96127_RS12530 PF00005 ABC transporter S96127_RS12540 PF12704 MacB-like periplasmic core domain S96127_RS12540 PF02687 FtsX-like permease family S96127_RS12540 PF00005 ABC transporter S96127_RS12550 PF10634 Fe2+ transport protein S96127_RS12555 PF03239 Iron permease FTR1 family S96127_RS12570 PF04960 Glutaminase S96127_RS12580 PF08220 DeoR-like helix-turn-helix domain S96127_RS12580 PF00455 DeoR C terminal sensor domain S96127_RS12585 PF00324 Amino acid permease S96127_RS12590 PF00155 Aminotransferase class I and II S96127_RS12595 PF02508 Rnf-Nqr subunit, membrane protein S96127_RS12605 PF02796 Helix-turn-helix domain of resolvase S96127_RS12605 PF00665 Integrase core domain S96127_RS12610 PF01695 IstB-like ATP binding protein S96127_RS12615 PF04909 Amidohydrolase S96127_RS12620 PF07690 Major Facilitator Superfamily S96127_RS12635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS12635 PF03466 LysR substrate binding domain S96127_RS12640 PF03328 HpcH/HpaI aldolase/citrate lyase family S96127_RS12645 PF01575 MaoC like domain S96127_RS12650 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain S96127_RS12650 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain S96127_RS12655 PF00072 Response regulator receiver domain S96127_RS12655 PF00196 Bacterial regulatory proteins, luxR family S96127_RS12660 PF00072 Response regulator receiver domain S96127_RS12660 PF01627 Hpt domain S96127_RS12660 PF00989 PAS fold S96127_RS12660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS12660 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS12660 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS12670 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS12670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS12675 PF00577 Outer membrane usher protein S96127_RS12675 PF13953 PapC C-terminal domain S96127_RS12675 PF13954 PapC N-terminal domain S96127_RS12685 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS12685 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS12695 PF13356 Arm DNA-binding domain S96127_RS12695 PF00589 Phage integrase family S96127_RS12700 PF00425 chorismate binding enzyme S96127_RS12705 PF07690 Major Facilitator Superfamily S96127_RS12710 PF00664 ABC transporter transmembrane region S96127_RS12710 PF00005 ABC transporter S96127_RS12715 PF04954 Siderophore-interacting protein S96127_RS12715 PF08021 Siderophore-interacting FAD-binding domain S96127_RS12715 PF00664 ABC transporter transmembrane region S96127_RS12715 PF00005 ABC transporter S96127_RS12725 PF00550 Phosphopantetheine attachment site S96127_RS12725 PF00501 AMP-binding enzyme S96127_RS12725 PF00668 Condensation domain S96127_RS12725 PF08242 Methyltransferase domain S96127_RS12730 PF00109 Beta-ketoacyl synthase, N-terminal domain S96127_RS12730 PF00550 Phosphopantetheine attachment site S96127_RS12730 PF02801 Beta-ketoacyl synthase, C-terminal domain S96127_RS12730 PF16197 Ketoacyl-synthetase C-terminal extension S96127_RS12730 PF00668 Condensation domain S96127_RS12730 PF00698 Acyl transferase domain S96127_RS12740 PF00975 Thioesterase domain S96127_RS12745 PF13193 AMP-binding enzyme C-terminal domain S96127_RS12745 PF00501 AMP-binding enzyme S96127_RS12750 PF07715 TonB-dependent Receptor Plug Domain S96127_RS12750 PF00593 TonB dependent receptor S96127_RS12785 PF01695 IstB-like ATP binding protein S96127_RS12790 PF00665 Integrase core domain S96127_RS12790 PF02796 Helix-turn-helix domain of resolvase S96127_RS12800 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE S96127_RS12815 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath S96127_RS12820 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 S96127_RS12830 PF00577 Outer membrane usher protein S96127_RS12830 PF13953 PapC C-terminal domain S96127_RS12830 PF13954 PapC N-terminal domain S96127_RS12835 PF00872 Transposase, Mutator family S96127_RS12840 PF13954 PapC N-terminal domain S96127_RS12840 PF00577 Outer membrane usher protein S96127_RS12840 PF13953 PapC C-terminal domain S96127_RS12845 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS12845 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS12850 PF16970 Type-1 fimbrial protein, A S96127_RS12855 PF10431 C-terminal, D2-small domain, of ClpB protein S96127_RS12855 PF17871 AAA lid domain S96127_RS12855 PF07724 AAA domain (Cdc48 subfamily) S96127_RS12855 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS12860 PF05947 Type VI secretion system, TssF S96127_RS12905 PF13406 Transglycosylase SLT domain S96127_RS12915 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS12920 PF00005 ABC transporter S96127_RS12930 PF05638 Type VI secretion system effector, Hcp S96127_RS12940 PF01568 Molydopterin dinucleotide binding domain S96127_RS12940 PF00384 Molybdopterin oxidoreductase S96127_RS12940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain S96127_RS12945 PF13247 4Fe-4S dicluster domain S96127_RS12945 PF12800 4Fe-4S binding domain S96127_RS12950 PF04976 DMSO reductase anchor subunit (DmsC) S96127_RS12955 PF02613 Nitrate reductase delta subunit S96127_RS12965 PF05643 Putative bacterial lipoprotein (DUF799) S96127_RS12975 PF03783 Curli production assembly/transport component CsgG S96127_RS12985 PF01292 Prokaryotic cytochrome b561 S96127_RS12990 PF00155 Aminotransferase class I and II S96127_RS12995 PF07350 Protein of unknown function (DUF1479) S96127_RS13000 PF02685 Glucokinase S96127_RS13010 PF03466 LysR substrate binding domain S96127_RS13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS13015 PF00248 Aldo/keto reductase family S96127_RS13025 PF01566 Natural resistance-associated macrophage protein S96127_RS13030 PF07662 Na+ dependent nucleoside transporter C-terminus S96127_RS13030 PF01773 Na+ dependent nucleoside transporter N-terminus S96127_RS13030 PF07670 Nucleoside recognition S96127_RS13065 PF00749 tRNA synthetases class I (E and Q), catalytic domain S96127_RS13070 PF01797 Transposase IS200 like S96127_RS13095 PF12843 Putative quorum-sensing-regulated virulence factor S96127_RS13100 PF03120 NAD-dependent DNA ligase OB-fold domain S96127_RS13100 PF01653 NAD-dependent DNA ligase adenylation domain S96127_RS13100 PF12826 Helix-hairpin-helix motif S96127_RS13100 PF03119 NAD-dependent DNA ligase C4 zinc finger domain S96127_RS13100 PF00533 BRCA1 C Terminus (BRCT) domain S96127_RS13105 PF04354 ZipA, C-terminal FtsZ-binding domain S96127_RS13115 PF00291 Pyridoxal-phosphate dependent enzyme S96127_RS13120 PF00381 PTS HPr component phosphorylation site S96127_RS13125 PF05524 PEP-utilising enzyme, N-terminal S96127_RS13125 PF02896 PEP-utilising enzyme, TIM barrel domain S96127_RS13125 PF00391 PEP-utilising enzyme, mobile domain S96127_RS13130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 S96127_RS13145 PF00672 HAMP domain S96127_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS13145 PF16527 Two-component sensor protein CpxA, periplasmic domain S96127_RS13145 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS13150 PF00486 Transcriptional regulatory protein, C terminal S96127_RS13150 PF00072 Response regulator receiver domain S96127_RS13155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS13160 PF12704 MacB-like periplasmic core domain S96127_RS13160 PF00005 ABC transporter S96127_RS13160 PF02687 FtsX-like permease family S96127_RS13165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain S96127_RS13165 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS13170 PF00474 Sodium:solute symporter family S96127_RS13180 PF00557 Metallopeptidase family M24 S96127_RS13190 PF00155 Aminotransferase class I and II S96127_RS13200 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS13200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS13200 PF00672 HAMP domain S96127_RS13205 PF00486 Transcriptional regulatory protein, C terminal S96127_RS13205 PF00072 Response regulator receiver domain S96127_RS13215 PF00291 Pyridoxal-phosphate dependent enzyme S96127_RS13220 PF00005 ABC transporter S96127_RS13225 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS13230 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS13240 PF07690 Major Facilitator Superfamily S96127_RS13245 PF01418 Helix-turn-helix domain, rpiR family S96127_RS13245 PF01380 SIS domain S96127_RS13250 PF04074 YhcH/YjgK/YiaL S96127_RS13255 PF00480 ROK family S96127_RS13260 PF12468 Type III secretion system leucine rich repeat protein S96127_RS13265 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase S96127_RS13270 PF00701 Dihydrodipicolinate synthetase family S96127_RS13275 PF04261 Dyp-type peroxidase family S96127_RS13280 PF06572 Protein of unknown function (DUF1131) S96127_RS13285 PF04076 Bacterial OB fold (BOF) protein S96127_RS13290 PF03212 Pertactin S96127_RS13290 PF03797 Autotransporter beta-domain S96127_RS13290 PF16168 Adhesin of bacterial autotransporter system, probable stalk S96127_RS13290 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS13300 PF00583 Acetyltransferase (GNAT) family S96127_RS13305 PF01218 Coproporphyrinogen III oxidase S96127_RS13310 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 S96127_RS13315 PF01515 Phosphate acetyl/butaryl transferase S96127_RS13315 PF00390 Malic enzyme, N-terminal domain S96127_RS13315 PF03949 Malic enzyme, NAD binding domain S96127_RS13320 PF00293 NUDIX domain S96127_RS13325 PF03264 NapC/NirT cytochrome c family, N-terminal region S96127_RS13330 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) S96127_RS13335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain S96127_RS13335 PF00384 Molybdopterin oxidoreductase S96127_RS13335 PF10518 TAT (twin-arginine translocation) pathway signal sequence S96127_RS13335 PF01568 Molydopterin dinucleotide binding domain S96127_RS13340 PF03927 NapD protein S96127_RS13345 PF13187 4Fe-4S dicluster domain S96127_RS13345 PF12800 4Fe-4S binding domain S96127_RS13345 PF00037 4Fe-4S binding domain S96127_RS13350 PF00196 Bacterial regulatory proteins, luxR family S96127_RS13350 PF00072 Response regulator receiver domain S96127_RS13360 PF00873 AcrB/AcrD/AcrF family S96127_RS13370 PF04307 LexA-binding, inner membrane-associated putative hydrolase S96127_RS13375 PF13186 Iron-sulfur cluster-binding domain S96127_RS13375 PF04055 Radical SAM superfamily S96127_RS13380 PF00884 Sulfatase S96127_RS13390 PF00005 ABC transporter S96127_RS13390 PF08402 TOBE domain S96127_RS13395 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS13410 PF03960 ArsC family S96127_RS13415 PF07687 Peptidase dimerisation domain S96127_RS13415 PF01546 Peptidase family M20/M25/M40 S96127_RS13420 PF02557 D-alanyl-D-alanine carboxypeptidase S96127_RS13425 PF13980 Uncharacterised protein family (UPF0370) S96127_RS13430 PF17176 tRNA-binding domain S96127_RS13430 PF05127 Helicase S96127_RS13430 PF13718 GNAT acetyltransferase 2 S96127_RS13430 PF08351 Domain of unknown function (DUF1726) S96127_RS13435 PF04284 Protein of unknown function (DUF441) S96127_RS13440 PF04228 Putative neutral zinc metallopeptidase S96127_RS13445 PF01259 SAICAR synthetase S96127_RS13450 PF01797 Transposase IS200 like S96127_RS13455 PF06804 NlpB/DapX lipoprotein S96127_RS13460 PF00701 Dihydrodipicolinate synthetase family S96127_RS13465 PF01842 ACT domain S96127_RS13470 PF00578 AhpC/TSA family S96127_RS13480 PF01594 AI-2E family transporter S96127_RS13485 PF01435 Peptidase family M48 S96127_RS13485 PF07720 Tetratricopeptide repeat S96127_RS13490 PF03960 ArsC family S96127_RS13495 PF00308 Bacterial dnaA protein S96127_RS13500 PF01797 Transposase IS200 like S96127_RS13510 PF00586 AIR synthase related protein, N-terminal domain S96127_RS13510 PF02769 AIR synthase related protein, C-terminal domain S96127_RS13515 PF00551 Formyl transferase S96127_RS13520 PF13302 Acetyltransferase (GNAT) domain S96127_RS13530 PF00005 ABC transporter S96127_RS13535 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS13540 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS13545 PF13090 Polyphosphate kinase C-terminal domain 2 S96127_RS13545 PF02503 Polyphosphate kinase middle domain S96127_RS13545 PF13089 Polyphosphate kinase N-terminal domain S96127_RS13545 PF17941 Polyphosphate kinase C-terminal domain 1 S96127_RS13550 PF02541 Ppx/GppA phosphatase family S96127_RS13560 PF00571 CBS domain S96127_RS13560 PF03448 MgtE intracellular N domain S96127_RS13560 PF01769 Divalent cation transporter S96127_RS13565 PF00012 Hsp70 protein S96127_RS13570 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS13575 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS13585 PF00202 Aminotransferase class-III S96127_RS13590 PF00155 Aminotransferase class I and II S96127_RS13590 PF00392 Bacterial regulatory proteins, gntR family S96127_RS13595 PF00005 ABC transporter S96127_RS13595 PF08402 TOBE domain S96127_RS13600 PF13533 Biotin-lipoyl like S96127_RS13605 PF00873 AcrB/AcrD/AcrF family S96127_RS13610 PF00873 AcrB/AcrD/AcrF family S96127_RS13615 PF07690 Major Facilitator Superfamily S96127_RS13625 PF00486 Transcriptional regulatory protein, C terminal S96127_RS13625 PF00072 Response regulator receiver domain S96127_RS13630 PF07411 Domain of unknown function (DUF1508) S96127_RS13635 PF01136 Peptidase family U32 S96127_RS13635 PF16325 Peptidase family U32 C-terminal domain S96127_RS13640 PF00781 Diacylglycerol kinase catalytic domain S96127_RS13660 PF08543 Phosphomethylpyrimidine kinase S96127_RS13675 PF00872 Transposase, Mutator family S96127_RS13705 PF05638 Type VI secretion system effector, Hcp S96127_RS13710 PF01797 Transposase IS200 like S96127_RS13715 PF02540 NAD synthase S96127_RS13715 PF00958 GMP synthase C terminal domain S96127_RS13715 PF00117 Glutamine amidotransferase class-I S96127_RS13720 PF00478 IMP dehydrogenase / GMP reductase domain S96127_RS13720 PF00571 CBS domain S96127_RS13725 PF13742 OB-fold nucleic acid binding domain S96127_RS13725 PF02601 Exonuclease VII, large subunit S96127_RS13730 PF07191 zinc-ribbons S96127_RS13740 PF01926 50S ribosome-binding GTPase S96127_RS13740 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal S96127_RS13745 PF13360 PQQ-like domain S96127_RS13750 PF09976 Tetratricopeptide repeat-like domain S96127_RS13755 PF13393 Histidyl-tRNA synthetase S96127_RS13755 PF03129 Anticodon binding domain S96127_RS13760 PF04551 GcpE protein S96127_RS13765 PF13464 Domain of unknown function (DUF4115) S96127_RS13775 PF04055 Radical SAM superfamily S96127_RS13780 PF00334 Nucleoside diphosphate kinase S96127_RS13790 PF03797 Autotransporter beta-domain S96127_RS13790 PF03212 Pertactin S96127_RS13790 PF16168 Adhesin of bacterial autotransporter system, probable stalk S96127_RS13795 PF03797 Autotransporter beta-domain S96127_RS13795 PF16168 Adhesin of bacterial autotransporter system, probable stalk S96127_RS13795 PF03212 Pertactin S96127_RS13810 PF14581 SseB protein C-terminal domain S96127_RS13810 PF07179 SseB protein N-terminal domain S96127_RS13815 PF00883 Cytosol aminopeptidase family, catalytic domain S96127_RS13815 PF12404 Peptidase S96127_RS13820 PF04384 Iron-sulphur cluster assembly S96127_RS13825 PF00111 2Fe-2S iron-sulfur cluster binding domain S96127_RS13830 PF00012 Hsp70 protein S96127_RS13835 PF07743 HSCB C-terminal oligomerisation domain S96127_RS13835 PF00226 DnaJ domain S96127_RS13840 PF01521 Iron-sulphur cluster biosynthesis S96127_RS13845 PF01592 NifU-like N terminal domain S96127_RS13850 PF00266 Aminotransferase class-V S96127_RS13855 PF02082 Transcriptional regulator S96127_RS13860 PF00588 SpoU rRNA Methylase family S96127_RS13865 PF00459 Inositol monophosphatase family S96127_RS13870 PF03824 High-affinity nickel-transport protein S96127_RS13875 PF06226 Protein of unknown function (DUF1007) S96127_RS13880 PF00874 PRD domain S96127_RS13885 PF12832 MFS_1 like family S96127_RS13890 PF13505 Outer membrane protein beta-barrel domain S96127_RS13900 PF00464 Serine hydroxymethyltransferase S96127_RS13905 PF00042 Globin S96127_RS13905 PF00970 Oxidoreductase FAD-binding domain S96127_RS13905 PF00175 Oxidoreductase NAD-binding domain S96127_RS13915 PF00543 Nitrogen regulatory protein P-II S96127_RS13920 PF02540 NAD synthase S96127_RS13920 PF00795 Carbon-nitrogen hydrolase S96127_RS13925 PF00158 Sigma-54 interaction domain S96127_RS13925 PF00072 Response regulator receiver domain S96127_RS13930 PF13942 YfhG lipoprotein S96127_RS13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS13935 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS13965 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal S96127_RS13965 PF02769 AIR synthase related protein, C-terminal domain S96127_RS13965 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain S96127_RS13970 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS13970 PF01464 Transglycosylase SLT domain S96127_RS13975 PF14437 MafB19-like deaminase S96127_RS13985 PF01380 SIS domain S96127_RS13990 PF01380 SIS domain S96127_RS13990 PF01418 Helix-turn-helix domain, rpiR family S96127_RS13995 PF12838 4Fe-4S dicluster domain S96127_RS14000 PF01797 Transposase IS200 like S96127_RS14005 PF01648 4'-phosphopantetheinyl transferase superfamily S96127_RS14010 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ S96127_RS14015 PF11967 Recombination protein O N terminal S96127_RS14015 PF02565 Recombination protein O C terminal S96127_RS14020 PF01926 50S ribosome-binding GTPase S96127_RS14020 PF07650 KH domain S96127_RS14025 PF14622 Ribonuclease-III-like S96127_RS14025 PF00035 Double-stranded RNA binding motif S96127_RS14030 PF10502 Signal peptidase, peptidase S26 S96127_RS14035 PF06421 GTP-binding protein LepA C-terminus S96127_RS14035 PF03144 Elongation factor Tu domain 2 S96127_RS14035 PF00009 Elongation factor Tu GTP binding domain S96127_RS14035 PF00679 Elongation factor G C-terminus S96127_RS14050 PF03888 MucB/RseB N-terminal domain S96127_RS14050 PF17188 MucB/RseB C-terminal domain S96127_RS14055 PF03872 Anti sigma-E protein RseA, N-terminal domain S96127_RS14055 PF03873 Anti sigma-E protein RseA, C-terminal domain S96127_RS14060 PF04542 Sigma-70 region 2 S96127_RS14060 PF08281 Sigma-70, region 4 S96127_RS14065 PF02910 Fumarate reductase flavoprotein C-term S96127_RS14065 PF00890 FAD binding domain S96127_RS14070 PF05175 Methyltransferase small domain S96127_RS14075 PF00270 DEAD/DEAH box helicase S96127_RS14075 PF00271 Helicase conserved C-terminal domain S96127_RS14080 PF12796 Ankyrin repeats (3 copies) S96127_RS14090 PF01228 Glycine radical S96127_RS14095 PF03167 Uracil DNA glycosylase superfamily S96127_RS14100 PF01470 Pyroglutamyl peptidase S96127_RS14115 PF03746 LamB/YcsF family S96127_RS14120 PF02626 Carboxyltransferase domain, subdomain A and B S96127_RS14135 PF01784 NIF3 (NGG1p interacting factor 3) S96127_RS14140 PF02112 cAMP phosphodiesterases class-II S96127_RS14145 PF03441 FAD binding domain of DNA photolyase S96127_RS14145 PF00875 DNA photolyase S96127_RS14150 PF08349 Protein of unknown function (DUF1722) S96127_RS14155 PF10725 Protein of unknown function (DUF2517) S96127_RS14170 PF03814 Potassium-transporting ATPase A subunit S96127_RS14180 PF02669 K+-transporting ATPase, c chain S96127_RS14185 PF13493 Domain of unknown function (DUF4118) S96127_RS14185 PF13492 GAF domain S96127_RS14185 PF02702 Osmosensitive K+ channel His kinase sensor domain S96127_RS14185 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS14185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS14190 PF00072 Response regulator receiver domain S96127_RS14190 PF00486 Transcriptional regulatory protein, C terminal S96127_RS14205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I S96127_RS14205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain S96127_RS14205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III S96127_RS14205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II S96127_RS14210 PF17206 SeqA protein N-terminal domain S96127_RS14210 PF03925 SeqA protein C-terminal domain S96127_RS14220 PF04794 YdjC-like protein S96127_RS14225 PF07883 Cupin domain S96127_RS14225 PF12833 Helix-turn-helix domain S96127_RS14230 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit S96127_RS14235 PF02378 Phosphotransferase system, EIIC S96127_RS14240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit S96127_RS14250 PF02537 CrcB-like protein, Camphor Resistance (CrcB) S96127_RS14255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) S96127_RS14260 PF02254 TrkA-N domain S96127_RS14260 PF07885 Ion channel S96127_RS14265 PF06411 HdeA/HdeB family S96127_RS14270 PF03824 High-affinity nickel-transport protein S96127_RS14275 PF03253 Urea transporter S96127_RS14285 PF02492 CobW/HypB/UreG, nucleotide-binding domain S96127_RS14290 PF01730 UreF S96127_RS14295 PF05194 UreE urease accessory protein, C-terminal domain S96127_RS14295 PF02814 UreE urease accessory protein, N-terminal domain S96127_RS14300 PF01979 Amidohydrolase family S96127_RS14300 PF00449 Urease alpha-subunit, N-terminal domain S96127_RS14305 PF00699 Urease beta subunit S96127_RS14310 PF00547 Urease, gamma subunit S96127_RS14315 PF00005 ABC transporter S96127_RS14320 PF00005 ABC transporter S96127_RS14325 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS14325 PF12911 N-terminal TM domain of oligopeptide transport permease C S96127_RS14330 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS14335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle S96127_RS14340 PF00313 'Cold-shock' DNA-binding domain S96127_RS14350 PF06711 Protein of unknown function (DUF1198) S96127_RS14355 PF09400 Protein of unknown function (DUF2002) S96127_RS14360 PF06392 Acid shock protein repeat S96127_RS14370 PF07972 NrdI Flavodoxin like S96127_RS14375 PF02867 Ribonucleotide reductase, barrel domain S96127_RS14375 PF08343 Ribonucleotide reductase N-terminal S96127_RS14375 PF00317 Ribonucleotide reductase, all-alpha domain S96127_RS14380 PF00268 Ribonucleotide reductase, small chain S96127_RS14385 PF00571 CBS domain S96127_RS14385 PF00005 ABC transporter S96127_RS14390 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS14395 PF04069 Substrate binding domain of ABC-type glycine betaine transport system S96127_RS14410 PF02796 Helix-turn-helix domain of resolvase S96127_RS14410 PF00665 Integrase core domain S96127_RS14415 PF01695 IstB-like ATP binding protein S96127_RS14430 PF00589 Phage integrase family S96127_RS14430 PF13356 Arm DNA-binding domain S96127_RS14440 PF12697 Alpha/beta hydrolase family S96127_RS14445 PF01402 Ribbon-helix-helix protein, copG family S96127_RS14450 PF00258 Flavodoxin S96127_RS14455 PF01475 Ferric uptake regulator family S96127_RS14465 PF03573 outer membrane porin, OprD family S96127_RS14470 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain S96127_RS14470 PF00749 tRNA synthetases class I (E and Q), catalytic domain S96127_RS14475 PF01797 Transposase IS200 like S96127_RS14480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 S96127_RS14480 PF00367 phosphotransferase system, EIIB S96127_RS14480 PF02378 Phosphotransferase system, EIIC S96127_RS14485 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase S96127_RS14490 PF01979 Amidohydrolase family S96127_RS14495 PF01047 MarR family S96127_RS14495 PF00480 ROK family S96127_RS14500 PF13344 Haloacid dehalogenase-like hydrolase S96127_RS14505 PF13537 Glutamine amidotransferase domain S96127_RS14505 PF00733 Asparagine synthase S96127_RS14540 PF01494 FAD binding domain S96127_RS14545 PF00919 Uncharacterized protein family UPF0004 S96127_RS14545 PF01938 TRAM domain S96127_RS14545 PF04055 Radical SAM superfamily S96127_RS14550 PF02562 PhoH-like protein S96127_RS14555 PF02130 Uncharacterized protein family UPF0054 S96127_RS14560 PF00571 CBS domain S96127_RS14560 PF03471 Transporter associated domain S96127_RS14565 PF00795 Carbon-nitrogen hydrolase S96127_RS14570 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS14575 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS14580 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS14585 PF00005 ABC transporter S96127_RS14590 PF07295 Zinc-ribbon containing domain S96127_RS14595 PF00133 tRNA synthetases class I (I, L, M and V) S96127_RS14595 PF13603 Leucyl-tRNA synthetase, Domain 2 S96127_RS14595 PF08264 Anticodon-binding domain of tRNA S96127_RS14600 PF04390 Lipopolysaccharide-assembly S96127_RS14605 PF14840 Processivity clamp loader gamma complex DNA pol III C-term S96127_RS14605 PF06144 DNA polymerase III, delta subunit S96127_RS14610 PF01467 Cytidylyltransferase-like S96127_RS14620 PF02590 Predicted SPOUT methyltransferase S96127_RS14625 PF00905 Penicillin binding protein transpeptidase domain S96127_RS14625 PF03717 Penicillin-binding Protein dimerisation domain S96127_RS14630 PF01098 Cell cycle protein S96127_RS14635 PF03330 Lytic transglycolase S96127_RS14635 PF05036 Sporulation related domain S96127_RS14640 PF07943 Penicillin-binding protein 5, C-terminal domain S96127_RS14640 PF00768 D-alanyl-D-alanine carboxypeptidase S96127_RS14645 PF04359 Protein of unknown function (DUF493) S96127_RS14650 PF03099 Biotin/lipoate A/B protein ligase family S96127_RS14655 PF04055 Radical SAM superfamily S96127_RS14655 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family S96127_RS14660 PF02416 mttA/Hcf106 family S96127_RS14665 PF02537 CrcB-like protein, Camphor Resistance (CrcB) S96127_RS14670 PF00313 'Cold-shock' DNA-binding domain S96127_RS14675 PF00313 'Cold-shock' DNA-binding domain S96127_RS14680 PF00196 Bacterial regulatory proteins, luxR family S96127_RS14705 PF00664 ABC transporter transmembrane region S96127_RS14705 PF00005 ABC transporter S96127_RS14715 PF04962 KduI/IolB family S96127_RS14720 PF01261 Xylose isomerase-like TIM barrel S96127_RS14725 PF00294 pfkB family carbohydrate kinase S96127_RS14730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold S96127_RS14730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain S96127_RS14735 PF02653 Branched-chain amino acid transport system / permease component S96127_RS14740 PF00005 ABC transporter S96127_RS14745 PF13407 Periplasmic binding protein domain S96127_RS14755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain S96127_RS14755 PF00205 Thiamine pyrophosphate enzyme, central domain S96127_RS14755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain S96127_RS14760 PF00171 Aldehyde dehydrogenase family S96127_RS14775 PF17962 Bacterial macroglobulin domain 6 S96127_RS14775 PF11974 Bacterial alpha-2-macroglobulin MG3 domain S96127_RS14775 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain S96127_RS14775 PF07703 Alpha-2-macroglobulin bait region domain S96127_RS14775 PF00207 Alpha-2-macroglobulin family S96127_RS14775 PF01835 MG2 domain S96127_RS14775 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain S96127_RS14780 PF01797 Transposase IS200 like S96127_RS14785 PF06832 Penicillin-Binding Protein C-terminus Family S96127_RS14785 PF00912 Transglycosylase S96127_RS14785 PF00905 Penicillin binding protein transpeptidase domain S96127_RS14790 PF13693 Winged helix-turn-helix DNA-binding S96127_RS14810 PF05638 Type VI secretion system effector, Hcp S96127_RS14825 PF03212 Pertactin S96127_RS14825 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS14825 PF03797 Autotransporter beta-domain S96127_RS14825 PF16168 Adhesin of bacterial autotransporter system, probable stalk S96127_RS14845 PF00872 Transposase, Mutator family S96127_RS14860 PF14310 Fibronectin type III-like domain S96127_RS14860 PF00933 Glycosyl hydrolase family 3 N terminal domain S96127_RS14860 PF01915 Glycosyl hydrolase family 3 C-terminal domain S96127_RS14870 PF00248 Aldo/keto reductase family S96127_RS14875 PF00248 Aldo/keto reductase family S96127_RS14880 PF03466 LysR substrate binding domain S96127_RS14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS14885 PF00665 Integrase core domain S96127_RS14885 PF02796 Helix-turn-helix domain of resolvase S96127_RS14890 PF01695 IstB-like ATP binding protein S96127_RS14905 PF00782 Dual specificity phosphatase, catalytic domain S96127_RS14910 PF12146 Serine aminopeptidase, S33 S96127_RS14910 PF12147 Putative methyltransferase S96127_RS14915 PF01553 Acyltransferase S96127_RS14925 PF01066 CDP-alcohol phosphatidyltransferase S96127_RS14935 PF00589 Phage integrase family S96127_RS14965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain S96127_RS14965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain S96127_RS14975 PF01797 Transposase IS200 like S96127_RS14980 PF01406 tRNA synthetases class I (C) catalytic domain S96127_RS14980 PF09190 DALR domain S96127_RS14985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD S96127_RS14990 PF00149 Calcineurin-like phosphoesterase S96127_RS14995 PF00731 AIR carboxylase S96127_RS15000 PF02222 ATP-grasp domain S96127_RS15000 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain S96127_RS15010 PF00005 ABC transporter S96127_RS15015 PF13472 GDSL-like Lipase/Acylhydrolase family S96127_RS15020 PF00106 short chain dehydrogenase S96127_RS15025 PF00085 Thioredoxin S96127_RS15030 PF16200 C-terminal region of band_7 S96127_RS15030 PF01145 SPFH domain / Band 7 family S96127_RS15035 PF01957 NfeD-like C-terminal, partner-binding S96127_RS15040 PF13411 MerR HTH family regulatory protein S96127_RS15045 PF00403 Heavy-metal-associated domain S96127_RS15050 PF01963 TraB family S96127_RS15055 PF04073 Aminoacyl-tRNA editing domain S96127_RS15070 PF07690 Major Facilitator Superfamily S96127_RS15075 PF00999 Sodium/hydrogen exchanger family S96127_RS15075 PF02254 TrkA-N domain S96127_RS15080 PF00294 pfkB family carbohydrate kinase S96127_RS15085 PF02706 Chain length determinant protein S96127_RS15090 PF00872 Transposase, Mutator family S96127_RS15095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II S96127_RS15095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain S96127_RS15095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III S96127_RS15095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I S96127_RS15100 PF00535 Glycosyl transferase family 2 S96127_RS15105 PF01050 Mannose-6-phosphate isomerase S96127_RS15105 PF00483 Nucleotidyl transferase S96127_RS15110 PF01370 NAD dependent epimerase/dehydratase family S96127_RS15120 PF00534 Glycosyl transferases group 1 S96127_RS15120 PF13439 Glycosyltransferase Family 4 S96127_RS15150 PF01370 NAD dependent epimerase/dehydratase family S96127_RS15155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family S96127_RS15165 PF00483 Nucleotidyl transferase S96127_RS15170 PF00970 Oxidoreductase FAD-binding domain S96127_RS15170 PF00175 Oxidoreductase NAD-binding domain S96127_RS15170 PF00111 2Fe-2S iron-sulfur cluster binding domain S96127_RS15175 PF00762 Ferrochelatase S96127_RS15180 PF05191 Adenylate kinase, active site lid S96127_RS15185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS15185 PF00183 Hsp90 protein S96127_RS15190 PF13662 Toprim domain S96127_RS15190 PF02132 RecR protein S96127_RS15195 PF02575 YbaB/EbfC DNA-binding family S96127_RS15200 PF12169 DNA polymerase III subunits gamma and tau domain III S96127_RS15200 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding S96127_RS15200 PF12170 DNA polymerase III tau subunit V interacting with alpha S96127_RS15205 PF00156 Phosphoribosyl transferase domain S96127_RS15210 PF04304 Protein of unknown function (DUF454) S96127_RS15220 PF10689 Protein of unknown function (DUF2496) S96127_RS15225 PF00924 Mechanosensitive ion channel S96127_RS15225 PF12794 Mechanosensitive ion channel inner membrane domain 1 S96127_RS15225 PF12795 Mechanosensitive ion channel porin domain S96127_RS15230 PF02635 DsrE/DsrF-like family S96127_RS15235 PF08361 MAATS-type transcriptional repressor, C-terminal region S96127_RS15235 PF00440 Bacterial regulatory proteins, tetR family S96127_RS15240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS15240 PF00529 HlyD membrane-fusion protein of T1SS S96127_RS15245 PF00873 AcrB/AcrD/AcrF family S96127_RS15250 PF01197 Ribosomal protein L31 S96127_RS15255 PF00444 Ribosomal protein L36 S96127_RS15265 PF10757 Biofilm formation regulator YbaJ S96127_RS15270 PF05321 Haemolysin expression modulating protein S96127_RS15280 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain S96127_RS15285 PF09619 Type III secretion system lipoprotein chaperone (YscW) S96127_RS15295 PF00909 Ammonium Transporter Family S96127_RS15300 PF00543 Nitrogen regulatory protein P-II S96127_RS15305 PF00664 ABC transporter transmembrane region S96127_RS15305 PF00005 ABC transporter S96127_RS15310 PF00664 ABC transporter transmembrane region S96127_RS15310 PF00005 ABC transporter S96127_RS15315 PF01037 Lrp/AsnC ligand binding domain S96127_RS15315 PF13404 AsnC-type helix-turn-helix domain S96127_RS15320 PF00291 Pyridoxal-phosphate dependent enzyme S96127_RS15330 PF12793 Sugar transport-related sRNA regulator N-term S96127_RS15330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle S96127_RS15335 PF06508 Queuosine biosynthesis protein QueC S96127_RS15350 PF13145 PPIC-type PPIASE domain S96127_RS15355 PF00216 Bacterial DNA-binding protein S96127_RS15360 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS15360 PF02190 ATP-dependent protease La (LON) substrate-binding domain S96127_RS15360 PF05362 Lon protease (S16) C-terminal proteolytic domain S96127_RS15365 PF07724 AAA domain (Cdc48 subfamily) S96127_RS15365 PF06689 ClpX C4-type zinc finger S96127_RS15365 PF10431 C-terminal, D2-small domain, of ClpB protein S96127_RS15370 PF00574 Clp protease S96127_RS15375 PF05697 Bacterial trigger factor protein (TF) S96127_RS15375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase S96127_RS15375 PF05698 Bacterial trigger factor protein (TF) C-terminus S96127_RS15380 PF01722 BolA-like protein S96127_RS15385 PF08139 Prokaryotic membrane lipoprotein lipid attachment site S96127_RS15385 PF03923 Uncharacterized lipoprotein S96127_RS15390 PF07690 Major Facilitator Superfamily S96127_RS15395 PF03502 Nucleoside-specific channel-forming protein, Tsx S96127_RS15400 PF06481 COX Aromatic Rich Motif S96127_RS15400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain S96127_RS15405 PF00115 Cytochrome C and Quinol oxidase polypeptide I S96127_RS15410 PF00510 Cytochrome c oxidase subunit III S96127_RS15415 PF03626 Prokaryotic Cytochrome C oxidase subunit IV S96127_RS15420 PF01040 UbiA prenyltransferase family S96127_RS15425 PF07690 Major Facilitator Superfamily S96127_RS15430 PF04461 Protein of unknown function (DUF520) S96127_RS15435 PF08546 Ketopantoate reductase PanE/ApbA C terminal S96127_RS15435 PF02558 Ketopantoate reductase PanE/ApbA S96127_RS15440 PF01965 DJ-1/PfpI family S96127_RS15445 PF02568 Thiamine biosynthesis protein (ThiI) S96127_RS15445 PF02926 THUMP domain S96127_RS15450 PF02609 Exonuclease VII small subunit S96127_RS15455 PF00348 Polyprenyl synthetase S96127_RS15460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase S96127_RS15460 PF02780 Transketolase, C-terminal domain S96127_RS15460 PF02779 Transketolase, pyrimidine binding domain S96127_RS15470 PF04608 Phosphatidylglycerophosphatase A S96127_RS15475 PF02769 AIR synthase related protein, C-terminal domain S96127_RS15475 PF00586 AIR synthase related protein, N-terminal domain S96127_RS15480 PF01029 NusB family S96127_RS15485 PF00885 6,7-dimethyl-8-ribityllumazine synthase S96127_RS15490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region S96127_RS15490 PF01872 RibD C-terminal domain S96127_RS15495 PF03477 ATP cone domain S96127_RS15510 PF01797 Transposase IS200 like S96127_RS15520 PF07549 SecD/SecF GG Motif S96127_RS15520 PF02355 Protein export membrane protein S96127_RS15525 PF02355 Protein export membrane protein S96127_RS15525 PF13721 SecD export protein N-terminal TM region S96127_RS15525 PF07549 SecD/SecF GG Motif S96127_RS15530 PF02699 Preprotein translocase subunit S96127_RS15535 PF01702 Queuine tRNA-ribosyltransferase S96127_RS15540 PF02547 Queuosine biosynthesis protein S96127_RS15545 PF04336 Acyl carrier protein phosphodiesterase S96127_RS15550 PF00578 AhpC/TSA family S96127_RS15550 PF10417 C-terminal domain of 1-Cys peroxiredoxin S96127_RS15570 PF00128 Alpha amylase, catalytic domain S96127_RS15570 PF02903 Alpha amylase, N-terminal ig-like domain S96127_RS15575 PF00324 Amino acid permease S96127_RS15580 PF05525 Branched-chain amino acid transport protein S96127_RS15585 PF12849 PBP superfamily domain S96127_RS15590 PF11808 Phosphate regulon sensor protein PhoR S96127_RS15590 PF00989 PAS fold S96127_RS15590 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS15590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS15595 PF00486 Transcriptional regulatory protein, C terminal S96127_RS15595 PF00072 Response regulator receiver domain S96127_RS15600 PF00149 Calcineurin-like phosphoesterase S96127_RS15600 PF12320 Type 5 capsule protein repressor C-terminal domain S96127_RS15605 PF13476 AAA domain S96127_RS15610 PF00480 ROK family S96127_RS15615 PF04381 Putative exonuclease, RdgC S96127_RS15620 PF06865 Pyrimidine/purine nucleoside phosphorylase S96127_RS15625 PF01202 Shikimate kinase S96127_RS15635 PF08241 Methyltransferase domain S96127_RS15645 PF07238 PilZ domain S96127_RS15645 PF07317 Flagellar regulator YcgR S96127_RS15650 PF00171 Aldehyde dehydrogenase family S96127_RS15655 PF01472 PUA domain S96127_RS15655 PF00696 Amino acid kinase family S96127_RS15660 PF07417 Sigma factor-binding transcriptional regulator Crl S96127_RS15665 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) S96127_RS15670 PF00156 Phosphoribosyl transferase domain S96127_RS15685 PF03466 LysR substrate binding domain S96127_RS15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS15690 PF01546 Peptidase family M20/M25/M40 S96127_RS15690 PF07687 Peptidase dimerisation domain S96127_RS15695 PF11798 IMS family HHH motif S96127_RS15695 PF11799 impB/mucB/samB family C-terminal domain S96127_RS15695 PF00817 impB/mucB/samB family S96127_RS15700 PF03009 Glycerophosphoryl diester phosphodiesterase family S96127_RS15710 PF02424 ApbE family S96127_RS15715 PF00970 Oxidoreductase FAD-binding domain S96127_RS15715 PF00111 2Fe-2S iron-sulfur cluster binding domain S96127_RS15715 PF00175 Oxidoreductase NAD-binding domain S96127_RS15720 PF02508 Rnf-Nqr subunit, membrane protein S96127_RS15725 PF02508 Rnf-Nqr subunit, membrane protein S96127_RS15730 PF04205 FMN-binding domain S96127_RS15735 PF03116 NQR2, RnfD, RnfE family S96127_RS15740 PF11973 NQRA C-terminal domain S96127_RS15740 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) S96127_RS15750 PF13230 Glutamine amidotransferases class-II S96127_RS15755 PF13580 SIS domain S96127_RS15760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain S96127_RS15760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain S96127_RS15760 PF09317 Domain of unknown function (DUF1974) S96127_RS15770 PF18071 HMW1C N-terminal S96127_RS15770 PF18254 HMW1 domain 2 S96127_RS15780 PF08479 POTRA domain, ShlB-type S96127_RS15780 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB S96127_RS15790 PF07687 Peptidase dimerisation domain S96127_RS15790 PF01546 Peptidase family M20/M25/M40 S96127_RS15795 PF00266 Aminotransferase class-V S96127_RS15800 PF00005 ABC transporter S96127_RS15805 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS15810 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS15815 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS15830 PF01425 Amidase S96127_RS15840 PF07690 Major Facilitator Superfamily S96127_RS15845 PF03591 AzlC protein S96127_RS15850 PF05437 Branched-chain amino acid transport protein (AzlD) S96127_RS15855 PF01047 MarR family S96127_RS15860 PF00529 HlyD membrane-fusion protein of T1SS S96127_RS15860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS15865 PF07690 Major Facilitator Superfamily S96127_RS15870 PF00588 SpoU rRNA Methylase family S96127_RS15870 PF08032 RNA 2'-O ribose methyltransferase substrate binding S96127_RS15875 PF00085 Thioredoxin S96127_RS15880 PF03942 DTW domain S96127_RS15885 PF13607 Succinyl-CoA ligase like flavodoxin domain S96127_RS15885 PF00583 Acetyltransferase (GNAT) family S96127_RS15885 PF13380 CoA binding domain S96127_RS15890 PF13091 PLD-like domain S96127_RS15895 PF10043 Predicted periplasmic lipoprotein (DUF2279) S96127_RS15925 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS15925 PF10431 C-terminal, D2-small domain, of ClpB protein S96127_RS15925 PF17871 AAA lid domain S96127_RS15925 PF02861 Clp amino terminal domain, pathogenicity island component S96127_RS15925 PF07724 AAA domain (Cdc48 subfamily) S96127_RS15930 PF02578 Multi-copper polyphenol oxidoreductase laccase S96127_RS15935 PF00849 RNA pseudouridylate synthase S96127_RS15935 PF01479 S4 domain S96127_RS15940 PF13525 Outer membrane lipoprotein S96127_RS15945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein S96127_RS15950 PF01797 Transposase IS200 like S96127_RS15960 PF02796 Helix-turn-helix domain of resolvase S96127_RS15960 PF00665 Integrase core domain S96127_RS15965 PF01695 IstB-like ATP binding protein S96127_RS15975 PF01817 Chorismate mutase type II S96127_RS15975 PF02153 Prephenate dehydrogenase S96127_RS15980 PF00793 DAHP synthetase I family S96127_RS15985 PF00072 Response regulator receiver domain S96127_RS15985 PF04397 LytTr DNA-binding domain S96127_RS15995 PF04338 Protein of unknown function, DUF481 S96127_RS16000 PF01797 Transposase IS200 like S96127_RS16005 PF01245 Ribosomal protein L19 S96127_RS16010 PF01746 tRNA (Guanine-1)-methyltransferase S96127_RS16015 PF05239 PRC-barrel domain S96127_RS16015 PF01782 RimM N-terminal domain S96127_RS16020 PF00886 Ribosomal protein S16 S96127_RS16025 PF02978 Signal peptide binding domain S96127_RS16025 PF02881 SRP54-type protein, helical bundle domain S96127_RS16025 PF00448 SRP54-type protein, GTPase domain S96127_RS16030 PF01578 Cytochrome C assembly protein S96127_RS16035 PF03471 Transporter associated domain S96127_RS16035 PF00571 CBS domain S96127_RS16035 PF01595 Cyclin M transmembrane N-terminal domain S96127_RS16045 PF02664 S-Ribosylhomocysteinase (LuxS) S96127_RS16050 PF04262 Glutamate-cysteine ligase S96127_RS16055 PF09335 SNARE associated Golgi protein S96127_RS16060 PF13419 Haloacid dehalogenase-like hydrolase S96127_RS16095 PF02599 Global regulator protein family S96127_RS16100 PF02272 DHHA1 domain S96127_RS16100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain S96127_RS16100 PF01411 tRNA synthetases class II (A) S96127_RS16105 PF02631 RecX family S96127_RS16110 PF00154 recA bacterial DNA recombination protein S96127_RS16115 PF02464 Competence-damaged protein S96127_RS16120 PF07690 Major Facilitator Superfamily S96127_RS16135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain S96127_RS16135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain S96127_RS16140 PF02779 Transketolase, pyrimidine binding domain S96127_RS16140 PF02780 Transketolase, C-terminal domain S96127_RS16145 PF00456 Transketolase, thiamine diphosphate binding domain S96127_RS16150 PF02653 Branched-chain amino acid transport system / permease component S96127_RS16155 PF00005 ABC transporter S96127_RS16165 PF13407 Periplasmic binding protein domain S96127_RS16170 PF00141 Peroxidase S96127_RS16175 PF07361 Cytochrome b562 S96127_RS16180 PF01292 Prokaryotic cytochrome b561 S96127_RS16185 PF02613 Nitrate reductase delta subunit S96127_RS16190 PF04976 DMSO reductase anchor subunit (DmsC) S96127_RS16195 PF12800 4Fe-4S binding domain S96127_RS16195 PF13247 4Fe-4S dicluster domain S96127_RS16200 PF01568 Molydopterin dinucleotide binding domain S96127_RS16200 PF00384 Molybdopterin oxidoreductase S96127_RS16200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain S96127_RS16205 PF00596 Class II Aldolase and Adducin N-terminal domain S96127_RS16210 PF08220 DeoR-like helix-turn-helix domain S96127_RS16210 PF00455 DeoR C terminal sensor domain S96127_RS16220 PF01797 Transposase IS200 like S96127_RS16225 PF00005 ABC transporter S96127_RS16230 PF02653 Branched-chain amino acid transport system / permease component S96127_RS16235 PF02653 Branched-chain amino acid transport system / permease component S96127_RS16240 PF01261 Xylose isomerase-like TIM barrel S96127_RS16245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain S96127_RS16245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain S96127_RS16250 PF05683 Fumarase C-terminus S96127_RS16250 PF05681 Fumarate hydratase (Fumerase) S96127_RS16260 PF00557 Metallopeptidase family M24 S96127_RS16270 PF07715 TonB-dependent Receptor Plug Domain S96127_RS16270 PF00593 TonB dependent receptor S96127_RS16280 PF00034 Cytochrome c S96127_RS16280 PF14376 Haem-binding domain S96127_RS16280 PF03150 Di-haem cytochrome c peroxidase S96127_RS16285 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS16300 PF01022 Bacterial regulatory protein, arsR family S96127_RS16305 PF02040 Arsenical pump membrane protein S96127_RS16310 PF13936 Helix-turn-helix domain S96127_RS16310 PF04198 Putative sugar-binding domain S96127_RS16315 PF02734 DAK2 domain S96127_RS16320 PF02733 Dak1 domain S96127_RS16330 PF00107 Zinc-binding dehydrogenase S96127_RS16330 PF08240 Alcohol dehydrogenase GroES-like domain S96127_RS16335 PF02502 Ribose/Galactose Isomerase S96127_RS16340 PF01624 MutS domain I S96127_RS16340 PF00488 MutS domain V S96127_RS16340 PF05192 MutS domain III S96127_RS16340 PF05190 MutS family domain IV S96127_RS16340 PF05188 MutS domain II S96127_RS16345 PF04545 Sigma-70, region 4 S96127_RS16345 PF04539 Sigma-70 region 3 S96127_RS16345 PF04542 Sigma-70 region 2 S96127_RS16345 PF00140 Sigma-70 factor, region 1.2 S96127_RS16350 PF01476 LysM domain S96127_RS16350 PF01551 Peptidase family M23 S96127_RS16360 PF01975 Survival protein SurE S96127_RS16365 PF01142 tRNA pseudouridine synthase D (TruD) S96127_RS16370 PF02542 YgbB family S96127_RS16375 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase S96127_RS16380 PF04977 Septum formation initiator S96127_RS16385 PF12084 Protein of unknown function (DUF3561) S96127_RS16395 PF00009 Elongation factor Tu GTP binding domain S96127_RS16400 PF01507 Phosphoadenosine phosphosulfate reductase family S96127_RS16405 PF14824 Sirohaem biosynthesis protein central S96127_RS16405 PF10414 Sirohaem synthase dimerisation region S96127_RS16405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases S96127_RS16435 PF01077 Nitrite and sulphite reductase 4Fe-4S domain S96127_RS16435 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain S96127_RS16440 PF00258 Flavodoxin S96127_RS16440 PF00667 FAD binding domain S96127_RS16440 PF00175 Oxidoreductase NAD-binding domain S96127_RS16445 PF01242 6-pyruvoyl tetrahydropterin synthase S96127_RS16450 PF04055 Radical SAM superfamily S96127_RS16455 PF00080 Copper/zinc superoxide dismutase (SODC) S96127_RS16460 PF03952 Enolase, N-terminal domain S96127_RS16460 PF00113 Enolase, C-terminal TIM barrel domain S96127_RS16465 PF06418 CTP synthase N-terminus S96127_RS16465 PF00117 Glutamine amidotransferase class-I S96127_RS16470 PF03819 MazG nucleotide pyrophosphohydrolase domain S96127_RS16475 PF13291 ACT domain S96127_RS16475 PF04607 Region found in RelA / SpoT proteins S96127_RS16475 PF02824 TGS domain S96127_RS16480 PF01938 TRAM domain S96127_RS16480 PF05958 tRNA (Uracil-5-)-methyltransferase S96127_RS16490 PF00672 HAMP domain S96127_RS16490 PF00072 Response regulator receiver domain S96127_RS16490 PF01627 Hpt domain S96127_RS16490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) S96127_RS16490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS16490 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS16495 PF00595 PDZ domain S96127_RS16500 PF13286 Phosphohydrolase-associated domain S96127_RS16500 PF01966 HD domain S96127_RS16505 PF01048 Phosphorylase superfamily S96127_RS16510 PF01497 Periplasmic binding protein S96127_RS16515 PF03458 UPF0126 domain S96127_RS16520 PF01521 Iron-sulphur cluster biosynthesis S96127_RS16525 PF00654 Voltage gated chloride channel S96127_RS16530 PF00202 Aminotransferase class-III S96127_RS16535 PF01032 FecCD transport family S96127_RS16540 PF01497 Periplasmic binding protein S96127_RS16545 PF00005 ABC transporter S96127_RS16550 PF00905 Penicillin binding protein transpeptidase domain S96127_RS16550 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal S96127_RS16550 PF00912 Transglycosylase S96127_RS16550 PF14814 Bifunctional transglycosylase second domain S96127_RS16555 PF04408 Helicase associated domain (HA2) S96127_RS16555 PF00271 Helicase conserved C-terminal domain S96127_RS16555 PF08482 ATP-dependent helicase C-terminal S96127_RS16555 PF00270 DEAD/DEAH box helicase S96127_RS16560 PF02834 LigT like Phosphoesterase S96127_RS16565 PF03749 Sugar fermentation stimulation protein RE domain S96127_RS16565 PF17746 SfsA N-terminal OB domain S96127_RS16570 PF01258 Prokaryotic dksA/traR C4-type zinc finger S96127_RS16575 PF00749 tRNA synthetases class I (E and Q), catalytic domain S96127_RS16580 PF12627 Probable RNA and SrmB- binding site of polymerase A S96127_RS16580 PF01743 Poly A polymerase head domain S96127_RS16580 PF12626 Polymerase A arginine-rich C-terminus S96127_RS16585 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) S96127_RS16590 PF02548 Ketopantoate hydroxymethyltransferase S96127_RS16595 PF02569 Pantoate-beta-alanine ligase S96127_RS16600 PF02261 Aspartate decarboxylase S96127_RS16610 PF01061 ABC-2 type transporter S96127_RS16615 PF00005 ABC transporter S96127_RS16620 PF00484 Carbonic anhydrase S96127_RS16625 PF00156 Phosphoribosyl transferase domain S96127_RS16630 PF10518 TAT (twin-arginine translocation) pathway signal sequence S96127_RS16630 PF07732 Multicopper oxidase S96127_RS16630 PF07731 Multicopper oxidase S96127_RS16630 PF00394 Multicopper oxidase S96127_RS16635 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) S96127_RS16640 PF17284 Spermidine synthase tetramerisation domain S96127_RS16645 PF02675 S-adenosylmethionine decarboxylase S96127_RS16650 PF00892 EamA-like transporter family S96127_RS16655 PF06062 Uncharacterised protein family (UPF0231) S96127_RS16660 PF11791 Aconitate B N-terminal domain S96127_RS16660 PF06434 Aconitate hydratase 2 N-terminus S96127_RS16660 PF00330 Aconitase family (aconitate hydratase) S96127_RS16665 PF01797 Transposase IS200 like S96127_RS16670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain S96127_RS16670 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS16675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) S96127_RS16675 PF00364 Biotin-requiring enzyme S96127_RS16675 PF02817 e3 binding domain S96127_RS16680 PF17831 Pyruvate dehydrogenase E1 component middle domain S96127_RS16680 PF00456 Transketolase, thiamine diphosphate binding domain S96127_RS16685 PF00392 Bacterial regulatory proteins, gntR family S96127_RS16685 PF07729 FCD domain S96127_RS16690 PF00324 Amino acid permease S96127_RS16695 PF17113 Regulatory signalling modulator protein AmpE S96127_RS16700 PF01510 N-acetylmuramoyl-L-alanine amidase S96127_RS16705 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain S96127_RS16705 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain S96127_RS16710 PF07963 Prokaryotic N-terminal methylation motif S96127_RS16715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain S96127_RS16715 PF00437 Type II/IV secretion system protein S96127_RS16720 PF00482 Type II secretion system (T2SS), protein F S96127_RS16725 PF00478 IMP dehydrogenase / GMP reductase domain S96127_RS16730 PF01121 Dephospho-CoA kinase S96127_RS16735 PF07072 Cell division protein S96127_RS16740 PF03884 DNA gyrase inhibitor YacG S96127_RS16750 PF02796 Helix-turn-helix domain of resolvase S96127_RS16750 PF00665 Integrase core domain S96127_RS16755 PF01695 IstB-like ATP binding protein S96127_RS16760 PF08676 MutL C terminal dimerisation domain S96127_RS16760 PF01119 DNA mismatch repair protein, C-terminal domain S96127_RS16770 PF13356 Arm DNA-binding domain S96127_RS16770 PF00589 Phage integrase family S96127_RS16780 PF03739 Lipopolysaccharide export system permease LptF/LptG S96127_RS16785 PF03739 Lipopolysaccharide export system permease LptF/LptG S96127_RS16790 PF02789 Cytosol aminopeptidase family, N-terminal domain S96127_RS16790 PF00883 Cytosol aminopeptidase family, catalytic domain S96127_RS16795 PF04364 DNA polymerase III chi subunit, HolC S96127_RS16800 PF08264 Anticodon-binding domain of tRNA S96127_RS16800 PF10458 Valyl tRNA synthetase tRNA binding arm S96127_RS16800 PF00133 tRNA synthetases class I (I, L, M and V) S96127_RS16805 PF00583 Acetyltransferase (GNAT) family S96127_RS16810 PF06877 Regulator of ribonuclease activity B S96127_RS16815 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain S96127_RS16815 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain S96127_RS16820 PF04074 YhcH/YjgK/YiaL S96127_RS16830 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS16835 PF12911 N-terminal TM domain of oligopeptide transport permease C S96127_RS16835 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS16840 PF00005 ABC transporter S96127_RS16840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region S96127_RS16845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region S96127_RS16845 PF00005 ABC transporter S96127_RS16850 PF13597 Anaerobic ribonucleoside-triphosphate reductase S96127_RS16850 PF03477 ATP cone domain S96127_RS16860 PF00392 Bacterial regulatory proteins, gntR family S96127_RS16860 PF07702 UTRA domain S96127_RS16865 PF06754 Phosphonate metabolism protein PhnG S96127_RS16870 PF05845 Bacterial phosphonate metabolism protein (PhnH) S96127_RS16875 PF05861 Bacterial phosphonate metabolism protein (PhnI) S96127_RS16880 PF06007 Phosphonate metabolism protein PhnJ S96127_RS16885 PF00005 ABC transporter S96127_RS16890 PF00005 ABC transporter S96127_RS16895 PF07969 Amidohydrolase family S96127_RS16905 PF12706 Beta-lactamase superfamily domain S96127_RS16910 PF13460 NAD(P)H-binding S96127_RS16925 PF17912 MalK OB fold domain S96127_RS16925 PF03459 TOBE domain S96127_RS16925 PF00005 ABC transporter S96127_RS16930 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS16935 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS16940 PF13416 Bacterial extracellular solute-binding protein S96127_RS16955 PF01541 GIY-YIG catalytic domain S96127_RS16960 PF13508 Acetyltransferase (GNAT) domain S96127_RS16965 PF02036 SCP-2 sterol transfer family S96127_RS16970 PF01136 Peptidase family U32 S96127_RS16975 PF01136 Peptidase family U32 S96127_RS16980 PF02321 Outer membrane efflux protein S96127_RS16980 PF08139 Prokaryotic membrane lipoprotein lipid attachment site S96127_RS16985 PF00873 AcrB/AcrD/AcrF family S96127_RS16990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS16990 PF00529 HlyD membrane-fusion protein of T1SS S96127_RS16995 PF00296 Luciferase-like monooxygenase S96127_RS17005 PF01381 Helix-turn-helix S96127_RS17015 PF03880 DbpA RNA binding domain S96127_RS17015 PF12343 Cold shock protein DEAD box A S96127_RS17015 PF00270 DEAD/DEAH box helicase S96127_RS17015 PF00271 Helicase conserved C-terminal domain S96127_RS17025 PF13181 Tetratricopeptide repeat S96127_RS17025 PF07719 Tetratricopeptide repeat S96127_RS17030 PF03725 3' exoribonuclease family, domain 2 S96127_RS17030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain S96127_RS17030 PF00575 S1 RNA binding domain S96127_RS17030 PF01138 3' exoribonuclease family, domain 1 S96127_RS17030 PF00013 KH domain S96127_RS17040 PF00669 Bacterial flagellin N-terminal helical region S96127_RS17040 PF00700 Bacterial flagellin C-terminal helical region S96127_RS17045 PF00486 Transcriptional regulatory protein, C terminal S96127_RS17045 PF18500 CadC C-terminal domain 1 S96127_RS17065 PF00460 Flagella basal body rod protein S96127_RS17065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal S96127_RS17075 PF02119 Flagellar P-ring protein S96127_RS17080 PF02107 Flagellar L-ring protein S96127_RS17085 PF00460 Flagella basal body rod protein S96127_RS17085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal S96127_RS17090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal S96127_RS17090 PF00460 Flagella basal body rod protein S96127_RS17095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal S96127_RS17095 PF07559 Flagellar basal body protein FlaE S96127_RS17095 PF00460 Flagella basal body rod protein S96127_RS17100 PF03963 Flagellar hook capping protein - N-terminal region S96127_RS17100 PF13861 FlgD Tudor-like domain S96127_RS17100 PF13860 FlgD Ig-like domain S96127_RS17105 PF00460 Flagella basal body rod protein S96127_RS17105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal S96127_RS17110 PF00460 Flagella basal body rod protein S96127_RS17115 PF13144 Chaperone for flagella basal body P-ring formation S96127_RS17135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain S96127_RS17135 PF18269 T3SS EscN ATPase C-terminal domain S96127_RS17150 PF01514 Secretory protein of YscJ/FliF family S96127_RS17150 PF08345 Flagellar M-ring protein C-terminal S96127_RS17155 PF02049 Flagellar hook-basal body complex protein FliE S96127_RS17160 PF02954 Bacterial regulatory protein, Fis family S96127_RS17160 PF00158 Sigma-54 interaction domain S96127_RS17160 PF00072 Response regulator receiver domain S96127_RS17170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term S96127_RS17175 PF00813 FliP family S96127_RS17180 PF01313 Bacterial export proteins, family 3 S96127_RS17185 PF01311 Bacterial export proteins, family 1 S96127_RS17190 PF01312 FlhB HrpN YscU SpaS Family S96127_RS17210 PF01497 Periplasmic binding protein S96127_RS17215 PF00419 Fimbrial protein S96127_RS17215 PF09222 Fimbrial adhesin F17-AG, lectin domain S96127_RS17220 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS17220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS17225 PF00577 Outer membrane usher protein S96127_RS17225 PF13954 PapC N-terminal domain S96127_RS17225 PF13953 PapC C-terminal domain S96127_RS17245 PF04972 BON domain S96127_RS17245 PF00263 Bacterial type II and III secretion system protein S96127_RS17245 PF13629 Pilus formation protein N terminal region S96127_RS17250 PF04972 BON domain S96127_RS17250 PF00263 Bacterial type II and III secretion system protein S96127_RS17250 PF13629 Pilus formation protein N terminal region S96127_RS17265 PF00437 Type II/IV secretion system protein S96127_RS17300 PF02472 Biopolymer transport protein ExbD/TolR S96127_RS17305 PF01618 MotA/TolQ/ExbB proton channel family S96127_RS17310 PF01053 Cys/Met metabolism PLP-dependent enzyme S96127_RS17315 PF09335 SNARE associated Golgi protein S96127_RS17320 PF12833 Helix-turn-helix domain S96127_RS17320 PF06719 AraC-type transcriptional regulator N-terminus S96127_RS17325 PF00465 Iron-containing alcohol dehydrogenase S96127_RS17335 PF00248 Aldo/keto reductase family S96127_RS17345 PF07731 Multicopper oxidase S96127_RS17345 PF07732 Multicopper oxidase S96127_RS17350 PF01553 Acyltransferase S96127_RS17355 PF03989 DNA gyrase C-terminal domain, beta-propeller S96127_RS17355 PF00521 DNA gyrase/topoisomerase IV, subunit A S96127_RS17365 PF02525 Flavodoxin-like fold S96127_RS17370 PF03466 LysR substrate binding domain S96127_RS17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS17375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS17375 PF00986 DNA gyrase B subunit, carboxyl terminus S96127_RS17375 PF01751 Toprim domain S96127_RS17375 PF00204 DNA gyrase B S96127_RS17380 PF05728 Uncharacterised protein family (UPF0227) S96127_RS17385 PF00149 Calcineurin-like phosphoesterase S96127_RS17390 PF06853 Protein of unknown function (DUF1249) S96127_RS17395 PF00293 NUDIX domain S96127_RS17400 PF02321 Outer membrane efflux protein S96127_RS17405 PF06693 Protein of unknown function (DUF1190) S96127_RS17410 PF03738 Glutathionylspermidine synthase preATP-grasp S96127_RS17415 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase S96127_RS17420 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase S96127_RS17425 PF04380 Membrane fusogenic activity S96127_RS17435 PF13520 Amino acid permease S96127_RS17440 PF00294 pfkB family carbohydrate kinase S96127_RS17440 PF01467 Cytidylyltransferase-like S96127_RS17445 PF03710 Glutamate-ammonia ligase adenylyltransferase S96127_RS17445 PF08335 GlnD PII-uridylyltransferase S96127_RS17450 PF01928 CYTH domain S96127_RS17455 PF08239 Bacterial SH3 domain S96127_RS17460 PF12627 Probable RNA and SrmB- binding site of polymerase A S96127_RS17460 PF01743 Poly A polymerase head domain S96127_RS17460 PF01966 HD domain S96127_RS17465 PF02673 Bacitracin resistance protein BacA S96127_RS17470 PF02152 Dihydroneopterin aldolase S96127_RS17475 PF02660 Glycerol-3-phosphate acyltransferase S96127_RS17480 PF00814 Glycoprotease family S96127_RS17485 PF01165 Ribosomal protein S21 S96127_RS17490 PF08275 DNA primase catalytic core, N-terminal domain S96127_RS17490 PF01807 CHC2 zinc finger S96127_RS17490 PF10410 DnaB-helicase binding domain of primase S96127_RS17490 PF08278 DNA primase DnaG DnaB-binding S96127_RS17495 PF00140 Sigma-70 factor, region 1.2 S96127_RS17495 PF03979 Sigma-70 factor, region 1.1 S96127_RS17495 PF04542 Sigma-70 region 2 S96127_RS17495 PF04539 Sigma-70 region 3 S96127_RS17495 PF04546 Sigma-70, non-essential region S96127_RS17495 PF04545 Sigma-70, region 4 S96127_RS17540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS17540 PF03466 LysR substrate binding domain S96127_RS17560 PF01042 Endoribonuclease L-PSP S96127_RS17580 PF00155 Aminotransferase class I and II S96127_RS17595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS17595 PF00529 HlyD membrane-fusion protein of T1SS S96127_RS17600 PF04632 Fusaric acid resistance protein family S96127_RS17620 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS17625 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS17630 PF01547 Bacterial extracellular solute-binding protein S96127_RS17635 PF00356 Bacterial regulatory proteins, lacI family S96127_RS17640 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain S96127_RS17645 PF17912 MalK OB fold domain S96127_RS17645 PF03459 TOBE domain S96127_RS17645 PF00005 ABC transporter S96127_RS17665 PF04829 Pre-toxin domain with VENN motif S96127_RS17665 PF05860 haemagglutination activity domain S96127_RS17665 PF13332 Hemagglutinin repeat S96127_RS17665 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS17670 PF05860 haemagglutination activity domain S96127_RS17670 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS17670 PF13332 Hemagglutinin repeat S96127_RS17670 PF04829 Pre-toxin domain with VENN motif S96127_RS17685 PF04829 Pre-toxin domain with VENN motif S96127_RS17685 PF13332 Hemagglutinin repeat S96127_RS17690 PF13332 Hemagglutinin repeat S96127_RS17690 PF04829 Pre-toxin domain with VENN motif S96127_RS17700 PF04829 Pre-toxin domain with VENN motif S96127_RS17700 PF05860 haemagglutination activity domain S96127_RS17700 PF13332 Hemagglutinin repeat S96127_RS17700 PF13018 Extended Signal Peptide of Type V secretion system S96127_RS17705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB S96127_RS17705 PF17287 POTRA domain S96127_RS17705 PF08479 POTRA domain, ShlB-type S96127_RS17710 PF00092 von Willebrand factor type A domain S96127_RS17715 PF02342 TerD domain S96127_RS17725 PF00092 von Willebrand factor type A domain S96127_RS17740 PF03729 Short repeat of unknown function (DUF308) S96127_RS17745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family S96127_RS17745 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS17750 PF05175 Methyltransferase small domain S96127_RS17755 PF03797 Autotransporter beta-domain S96127_RS17760 PF01863 Protein of unknown function DUF45 S96127_RS17765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold S96127_RS17770 PF00375 Sodium:dicarboxylate symporter family S96127_RS17775 PF01797 Transposase IS200 like S96127_RS17780 PF10688 Bacterial inner membrane protein S96127_RS17785 PF08666 SAF domain S96127_RS17785 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus S96127_RS17790 PF08125 Mannitol dehydrogenase C-terminal domain S96127_RS17790 PF01232 Mannitol dehydrogenase Rossmann domain S96127_RS17795 PF02614 Glucuronate isomerase S96127_RS17805 PF07690 Major Facilitator Superfamily S96127_RS17810 PF00392 Bacterial regulatory proteins, gntR family S96127_RS17810 PF07729 FCD domain S96127_RS17820 PF09335 SNARE associated Golgi protein S96127_RS17825 PF13721 SecD export protein N-terminal TM region S96127_RS17835 PF05957 Bacterial protein of unknown function (DUF883) S96127_RS17840 PF07332 Putative Actinobacterial Holin-X, holin superfamily III S96127_RS17850 PF07681 DoxX S96127_RS17860 PF00665 Integrase core domain S96127_RS17860 PF02796 Helix-turn-helix domain of resolvase S96127_RS17865 PF01695 IstB-like ATP binding protein S96127_RS17870 PF00293 NUDIX domain S96127_RS17880 PF01043 SecA preprotein cross-linking domain S96127_RS17880 PF07517 SecA DEAD-like domain S96127_RS17880 PF02810 SEC-C motif S96127_RS17880 PF07516 SecA Wing and Scaffold domain S96127_RS17885 PF06558 Secretion monitor precursor protein (SecM) S96127_RS17895 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase S96127_RS17900 PF00091 Tubulin/FtsZ family, GTPase domain S96127_RS17900 PF12327 FtsZ family, C-terminal domain S96127_RS17905 PF02491 SHS2 domain inserted in FTSA S96127_RS17910 PF08478 POTRA domain, FtsQ-type S96127_RS17910 PF03799 Cell division protein FtsQ S96127_RS17915 PF01820 D-ala D-ala ligase N-terminus S96127_RS17915 PF07478 D-ala D-ala ligase C-terminus S96127_RS17920 PF08245 Mur ligase middle domain S96127_RS17920 PF02875 Mur ligase family, glutamate ligase domain S96127_RS17920 PF01225 Mur ligase family, catalytic domain S96127_RS17925 PF04101 Glycosyltransferase family 28 C-terminal domain S96127_RS17925 PF03033 Glycosyltransferase family 28 N-terminal domain S96127_RS17930 PF01098 Cell cycle protein S96127_RS17935 PF08245 Mur ligase middle domain S96127_RS17935 PF02875 Mur ligase family, glutamate ligase domain S96127_RS17940 PF00953 Glycosyl transferase family 4 S96127_RS17940 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 S96127_RS17945 PF02875 Mur ligase family, glutamate ligase domain S96127_RS17945 PF08245 Mur ligase middle domain S96127_RS17945 PF01225 Mur ligase family, catalytic domain S96127_RS17950 PF01225 Mur ligase family, catalytic domain S96127_RS17950 PF02875 Mur ligase family, glutamate ligase domain S96127_RS17950 PF08245 Mur ligase middle domain S96127_RS17955 PF03717 Penicillin-binding Protein dimerisation domain S96127_RS17955 PF00905 Penicillin binding protein transpeptidase domain S96127_RS17960 PF04999 Cell division protein FtsL S96127_RS17965 PF01795 MraW methylase family S96127_RS17970 PF02381 MraZ protein, putative antitoxin-like S96127_RS17980 PF06610 L-alanine exporter S96127_RS17985 PF00356 Bacterial regulatory proteins, lacI family S96127_RS17985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family S96127_RS17990 PF01797 Transposase IS200 like S96127_RS17995 PF10369 Small subunit of acetolactate synthase S96127_RS18000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain S96127_RS18000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain S96127_RS18000 PF00205 Thiamine pyrophosphate enzyme, central domain S96127_RS18005 PF00501 AMP-binding enzyme S96127_RS18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS18010 PF03466 LysR substrate binding domain S96127_RS18020 PF01797 Transposase IS200 like S96127_RS18025 PF00682 HMGL-like S96127_RS18025 PF08502 LeuA allosteric (dimerisation) domain S96127_RS18030 PF00180 Isocitrate/isopropylmalate dehydrogenase S96127_RS18035 PF00330 Aconitase family (aconitate hydratase) S96127_RS18040 PF00694 Aconitase C-terminal domain S96127_RS18045 PF07690 Major Facilitator Superfamily S96127_RS18050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle S96127_RS18050 PF12793 Sugar transport-related sRNA regulator N-term S96127_RS18060 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS18065 PF00005 ABC transporter S96127_RS18070 PF09335 SNARE associated Golgi protein S96127_RS18075 PF03104 DNA polymerase family B, exonuclease domain S96127_RS18075 PF00136 DNA polymerase family B S96127_RS18080 PF00176 SNF2 family N-terminal domain S96127_RS18080 PF18339 RapA N-terminal Tudor like domain 1 S96127_RS18080 PF18337 RapA N-terminal Tudor like domain S96127_RS18080 PF12137 RNA polymerase recycling family C-terminal S96127_RS18080 PF00271 Helicase conserved C-terminal domain S96127_RS18095 PF05736 OprF membrane domain S96127_RS18095 PF00691 OmpA family S96127_RS18100 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE S96127_RS18130 PF04717 Type VI secretion system, phage-baseplate injector S96127_RS18130 PF06715 Gp5 C-terminal repeat (3 copies) S96127_RS18135 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS18135 PF10431 C-terminal, D2-small domain, of ClpB protein S96127_RS18135 PF07724 AAA domain (Cdc48 subfamily) S96127_RS18135 PF17871 AAA lid domain S96127_RS18145 PF05947 Type VI secretion system, TssF S96127_RS18160 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath S96127_RS18165 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 S96127_RS18180 PF00849 RNA pseudouridylate synthase S96127_RS18185 PF00226 DnaJ domain S96127_RS18185 PF05099 Tellurite resistance protein TerB S96127_RS18190 PF04453 LPS transport system D S96127_RS18190 PF03968 OstA-like protein S96127_RS18195 PF00639 PPIC-type PPIASE domain S96127_RS18195 PF09312 SurA N-terminal domain S96127_RS18200 PF04166 Pyridoxal phosphate biosynthetic protein PdxA S96127_RS18205 PF00398 Ribosomal RNA adenine dimethylase S96127_RS18210 PF04379 ApaG domain S96127_RS18215 PF00149 Calcineurin-like phosphoesterase S96127_RS18230 PF01797 Transposase IS200 like S96127_RS18235 PF00186 Dihydrofolate reductase S96127_RS18240 PF12821 Threonine/Serine exporter, ThrE S96127_RS18245 PF06738 Putative threonine/serine exporter S96127_RS18250 PF01810 LysE type translocator S96127_RS18255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain S96127_RS18255 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain S96127_RS18255 PF02142 MGS-like domain S96127_RS18260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain S96127_RS18260 PF00117 Glutamine amidotransferase class-I S96127_RS18265 PF01113 Dihydrodipicolinate reductase, N-terminus S96127_RS18265 PF05173 Dihydrodipicolinate reductase, C-terminus S96127_RS18270 PF01797 Transposase IS200 like S96127_RS18275 PF02401 LytB protein S96127_RS18280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase S96127_RS18285 PF01252 Signal peptidase (SPase) II S96127_RS18290 PF00133 tRNA synthetases class I (I, L, M and V) S96127_RS18290 PF08264 Anticodon-binding domain of tRNA S96127_RS18290 PF06827 Zinc finger found in FPG and IleRS S96127_RS18295 PF01687 Riboflavin kinase S96127_RS18295 PF06574 FAD synthetase S96127_RS18300 PF01649 Ribosomal protein S20 S96127_RS18305 PF03466 LysR substrate binding domain S96127_RS18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS18310 PF06965 Na+/H+ antiporter 1 S96127_RS18315 PF00226 DnaJ domain S96127_RS18315 PF00684 DnaJ central domain S96127_RS18315 PF01556 DnaJ C terminal domain S96127_RS18320 PF00012 Hsp70 protein S96127_RS18325 PF01184 GPR1/FUN34/yaaH family S96127_RS18335 PF07690 Major Facilitator Superfamily S96127_RS18340 PF00994 Probable molybdopterin binding domain S96127_RS18345 PF00923 Transaldolase/Fructose-6-phosphate aldolase S96127_RS18355 PF03883 Peroxide stress protein YaaA S96127_RS18360 PF00291 Pyridoxal-phosphate dependent enzyme S96127_RS18360 PF14821 Threonine synthase N terminus S96127_RS18365 PF00288 GHMP kinases N terminal domain S96127_RS18365 PF08544 GHMP kinases C terminal S96127_RS18370 PF00696 Amino acid kinase family S96127_RS18370 PF01842 ACT domain S96127_RS18370 PF13840 ACT domain S96127_RS18370 PF00742 Homoserine dehydrogenase S96127_RS18370 PF03447 Homoserine dehydrogenase, NAD binding domain S96127_RS18375 PF08254 Threonine leader peptide S96127_RS18380 PF00072 Response regulator receiver domain S96127_RS18380 PF00486 Transcriptional regulatory protein, C terminal S96127_RS18385 PF05981 CreA protein S96127_RS18390 PF06445 GyrI-like small molecule binding domain S96127_RS18390 PF12833 Helix-turn-helix domain S96127_RS18395 PF00300 Histidine phosphatase superfamily (branch 1) S96127_RS18400 PF01931 Protein of unknown function DUF84 S96127_RS18405 PF01371 Trp repressor protein S96127_RS18410 PF01464 Transglycosylase SLT domain S96127_RS18410 PF14718 Soluble lytic murein transglycosylase L domain S96127_RS18415 PF00689 Cation transporting ATPase, C-terminus S96127_RS18415 PF00690 Cation transporter/ATPase, N-terminus S96127_RS18425 PF17152 Periplasmic sensor domain S96127_RS18425 PF00990 Diguanylate cyclase, GGDEF domain S96127_RS18430 PF00691 OmpA family S96127_RS18440 PF02661 Fic/DOC family S96127_RS18445 PF13521 AAA domain S96127_RS18445 PF01381 Helix-turn-helix S96127_RS18450 PF18073 Rubredoxin metal binding domain S96127_RS18455 PF18429 Domain of unknown function (DUF5609) S96127_RS18460 PF10144 Bacterial virulence factor haemolysin S96127_RS18465 PF01048 Phosphorylase superfamily S96127_RS18470 PF01676 Metalloenzyme superfamily S96127_RS18480 PF01791 DeoC/LacD family aldolase S96127_RS18485 PF07670 Nucleoside recognition S96127_RS18485 PF01773 Na+ dependent nucleoside transporter N-terminus S96127_RS18485 PF07662 Na+ dependent nucleoside transporter C-terminus S96127_RS18490 PF01026 TatD related DNase S96127_RS18495 PF01734 Patatin-like phospholipase S96127_RS18500 PF07043 Protein of unknown function (DUF1328) S96127_RS18505 PF04972 BON domain S96127_RS18510 PF03144 Elongation factor Tu domain 2 S96127_RS18510 PF16658 Class II release factor RF3, C-terminal domain S96127_RS18510 PF00009 Elongation factor Tu GTP binding domain S96127_RS18515 PF00583 Acetyltransferase (GNAT) family S96127_RS18520 PF03603 DNA polymerase III psi subunit S96127_RS18525 PF05175 Methyltransferase small domain S96127_RS18525 PF08468 Methyltransferase small domain N-terminal S96127_RS18535 PF07256 Protein of unknown function (DUF1435) S96127_RS18540 PF00990 Diguanylate cyclase, GGDEF domain S96127_RS18545 PF01095 Pectinesterase S96127_RS18560 PF00873 AcrB/AcrD/AcrF family S96127_RS18565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS18580 PF01075 Glycosyltransferase family 9 (heptosyltransferase) S96127_RS18585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain S96127_RS18585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain S96127_RS18600 PF00005 ABC transporter S96127_RS18605 PF02653 Branched-chain amino acid transport system / permease component S96127_RS18610 PF02653 Branched-chain amino acid transport system / permease component S96127_RS18615 PF13407 Periplasmic binding protein domain S96127_RS18620 PF01791 DeoC/LacD family aldolase S96127_RS18625 PF03992 Antibiotic biosynthesis monooxygenase S96127_RS18630 PF10696 Protein of unknown function (DUF2501) S96127_RS18635 PF00391 PEP-utilising enzyme, mobile domain S96127_RS18635 PF02896 PEP-utilising enzyme, TIM barrel domain S96127_RS18635 PF00381 PTS HPr component phosphorylation site S96127_RS18635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 S96127_RS18635 PF05524 PEP-utilising enzyme, N-terminal S96127_RS18645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit S96127_RS18650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit S96127_RS18655 PF12833 Helix-turn-helix domain S96127_RS18665 PF05987 Bacterial protein of unknown function (DUF898) S96127_RS18705 PF01555 DNA methylase S96127_RS18720 PF12102 Domain of unknown function (DUF3578) S96127_RS18720 PF07728 AAA domain (dynein-related subfamily) S96127_RS18725 PF02796 Helix-turn-helix domain of resolvase S96127_RS18725 PF00665 Integrase core domain S96127_RS18730 PF01695 IstB-like ATP binding protein S96127_RS18735 PF02580 D-Tyr-tRNA(Tyr) deacylase S96127_RS18740 PF03631 Virulence factor BrkB S96127_RS18745 PF13419 Haloacid dehalogenase-like hydrolase S96127_RS18750 PF00009 Elongation factor Tu GTP binding domain S96127_RS18750 PF00679 Elongation factor G C-terminus S96127_RS18750 PF03144 Elongation factor Tu domain 2 S96127_RS18755 PF00120 Glutamine synthetase, catalytic domain S96127_RS18755 PF03951 Glutamine synthetase, beta-Grasp domain S96127_RS18760 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS18760 PF00989 PAS fold S96127_RS18760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS18765 PF02954 Bacterial regulatory protein, Fis family S96127_RS18765 PF00072 Response regulator receiver domain S96127_RS18765 PF00158 Sigma-54 interaction domain S96127_RS18770 PF06969 HemN C-terminal domain S96127_RS18770 PF04055 Radical SAM superfamily S96127_RS18775 PF04220 Der GTPase activator (YihI) S96127_RS18780 PF01926 50S ribosome-binding GTPase S96127_RS18785 PF01797 Transposase IS200 like S96127_RS18795 PF01612 3'-5' exonuclease S96127_RS18795 PF00476 DNA polymerase family A S96127_RS18795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain S96127_RS18795 PF01367 5'-3' exonuclease, C-terminal SAM fold S96127_RS18800 PF01323 DSBA-like thioredoxin domain S96127_RS18805 PF01636 Phosphotransferase enzyme family S96127_RS18810 PF06288 Protein of unknown function (DUF1040) S96127_RS18815 PF12804 MobA-like NTP transferase domain S96127_RS18820 PF03205 Molybdopterin guanine dinucleotide synthesis protein B S96127_RS18825 PF00872 Transposase, Mutator family S96127_RS18850 PF02796 Helix-turn-helix domain of resolvase S96127_RS18850 PF00665 Integrase core domain S96127_RS18855 PF01695 IstB-like ATP binding protein S96127_RS18865 PF03466 LysR substrate binding domain S96127_RS18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS18870 PF17954 Quercetinase C-terminal cupin domain S96127_RS18870 PF02678 Pirin S96127_RS18880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases S96127_RS18885 PF04348 LppC putative lipoprotein S96127_RS18890 PF02021 Uncharacterised protein family UPF0102 S96127_RS18895 PF13580 SIS domain S96127_RS18900 PF04972 BON domain S96127_RS18905 PF00912 Transglycosylase S96127_RS18915 PF00072 Response regulator receiver domain S96127_RS18915 PF01627 Hpt domain S96127_RS18915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS18915 PF18415 Histidine kinase receptor ArcB trans-membrane domain S96127_RS18915 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS18915 PF00989 PAS fold S96127_RS18920 PF04055 Radical SAM superfamily S96127_RS18920 PF16199 Radical_SAM C-terminal domain S96127_RS18925 PF00310 Glutamine amidotransferases class-II S96127_RS18925 PF04898 Glutamate synthase central domain S96127_RS18925 PF01645 Conserved region in glutamate synthase S96127_RS18925 PF01493 GXGXG motif S96127_RS18930 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster S96127_RS18930 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS18940 PF04386 Stringent starvation protein B S96127_RS18945 PF00043 Glutathione S-transferase, C-terminal domain S96127_RS18945 PF02798 Glutathione S-transferase, N-terminal domain S96127_RS18955 PF00380 Ribosomal protein S9/S16 S96127_RS18960 PF00572 Ribosomal protein L13 S96127_RS18965 PF03969 AFG1-like ATPase S96127_RS18970 PF06295 Protein of unknown function (DUF1043) S96127_RS18975 PF13180 PDZ domain S96127_RS18975 PF00595 PDZ domain S96127_RS18980 PF01797 Transposase IS200 like S96127_RS18985 PF13180 PDZ domain S96127_RS18990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) S96127_RS18995 PF01722 BolA-like protein S96127_RS19000 PF13466 STAS domain S96127_RS19005 PF05494 MlaC protein S96127_RS19010 PF02470 MlaD protein S96127_RS19015 PF02405 Permease MlaE S96127_RS19020 PF00005 ABC transporter S96127_RS19025 PF01699 Sodium/calcium exchanger protein S96127_RS19030 PF00571 CBS domain S96127_RS19030 PF01380 SIS domain S96127_RS19040 PF06835 Lipopolysaccharide-assembly, LptC-related S96127_RS19045 PF03968 OstA-like protein S96127_RS19050 PF00005 ABC transporter S96127_RS19050 PF12399 Branched-chain amino acid ATP-binding cassette transporter S96127_RS19055 PF04552 Sigma-54, DNA binding domain S96127_RS19055 PF00309 Sigma-54 factor, Activator interacting domain (AID) S96127_RS19055 PF04963 Sigma-54 factor, core binding domain S96127_RS19065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 S96127_RS19070 PF03668 P-loop ATPase protein family S96127_RS19075 PF00381 PTS HPr component phosphorylation site S96127_RS19080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain S96127_RS19080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain S96127_RS19085 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain S96127_RS19085 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain S96127_RS19090 PF01042 Endoribonuclease L-PSP S96127_RS19100 PF00356 Bacterial regulatory proteins, lacI family S96127_RS19105 PF02378 Phosphotransferase system, EIIC S96127_RS19105 PF00367 phosphotransferase system, EIIB S96127_RS19110 PF00128 Alpha amylase, catalytic domain S96127_RS19110 PF11941 Domain of unknown function (DUF3459) S96127_RS19115 PF01272 Transcription elongation factor, GreA/GreB, C-term S96127_RS19115 PF14760 Rnk N-terminus S96127_RS19120 PF07361 Cytochrome b562 S96127_RS19130 PF01523 Putative modulator of DNA gyrase S96127_RS19135 PF04751 Protein of unknown function (DUF615) S96127_RS19140 PF01337 Barstar (barnase inhibitor) S96127_RS19155 PF04632 Fusaric acid resistance protein family S96127_RS19160 PF13533 Biotin-lipoyl like S96127_RS19165 PF07869 Protein of unknown function (DUF1656) S96127_RS19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS19170 PF03466 LysR substrate binding domain S96127_RS19175 PF03466 LysR substrate binding domain S96127_RS19175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS19185 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain S96127_RS19185 PF18413 Neuraminidase-like domain S96127_RS19190 PF12256 Insecticide toxin TcdB middle/N-terminal region S96127_RS19190 PF12255 Insecticide toxin TcdB middle/C-terminal region S96127_RS19190 PF03534 Salmonella virulence plasmid 65kDa B protein S96127_RS19210 PF18807 Tripartite Tc toxins repeat S96127_RS19210 PF05785 Rho-activating domain of cytotoxic necrotizing factor S96127_RS19215 PF18807 Tripartite Tc toxins repeat S96127_RS19215 PF14431 YwqJ-like deaminase S96127_RS19220 PF01523 Putative modulator of DNA gyrase S96127_RS19225 PF00795 Carbon-nitrogen hydrolase S96127_RS19230 PF13502 AsmA-like C-terminal region S96127_RS19230 PF13116 Protein of unknown function S96127_RS19235 PF00575 S1 RNA binding domain S96127_RS19235 PF10150 Ribonuclease E/G family S96127_RS19240 PF02545 Maf-like protein S96127_RS19245 PF04093 rod shape-determining protein MreD S96127_RS19250 PF04085 rod shape-determining protein MreC S96127_RS19260 PF17157 Gammaproteobacterial periplasmic sensor domain S96127_RS19260 PF00563 EAL domain S96127_RS19260 PF00990 Diguanylate cyclase, GGDEF domain S96127_RS19265 PF08240 Alcohol dehydrogenase GroES-like domain S96127_RS19265 PF00107 Zinc-binding dehydrogenase S96127_RS19270 PF00174 Oxidoreductase molybdopterin binding domain S96127_RS19275 PF01794 Ferric reductase like transmembrane component S96127_RS19280 PF01220 Dehydroquinase class II S96127_RS19285 PF00364 Biotin-requiring enzyme S96127_RS19290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain S96127_RS19290 PF00289 Biotin carboxylase, N-terminal domain S96127_RS19290 PF02785 Biotin carboxylase C-terminal domain S96127_RS19300 PF06196 Protein of unknown function (DUF997) S96127_RS19305 PF00474 Sodium:solute symporter family S96127_RS19315 PF01207 Dihydrouridine synthase (Dus) S96127_RS19320 PF02954 Bacterial regulatory protein, Fis family S96127_RS19345 PF07690 Major Facilitator Superfamily S96127_RS19350 PF02627 Carboxymuconolactone decarboxylase family S96127_RS19355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase S96127_RS19355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase S96127_RS19360 PF00753 Metallo-beta-lactamase superfamily S96127_RS19365 PF05433 Glycine zipper 2TM domain S96127_RS19370 PF00313 'Cold-shock' DNA-binding domain S96127_RS19375 PF00313 'Cold-shock' DNA-binding domain S96127_RS19395 PF02798 Glutathione S-transferase, N-terminal domain S96127_RS19400 PF00571 CBS domain S96127_RS19400 PF01380 SIS domain S96127_RS19405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain S96127_RS19405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain S96127_RS19415 PF02653 Branched-chain amino acid transport system / permease component S96127_RS19420 PF00005 ABC transporter S96127_RS19430 PF03279 Bacterial lipid A biosynthesis acyltransferase S96127_RS19440 PF00999 Sodium/hydrogen exchanger family S96127_RS19445 PF00860 Permease family S96127_RS19450 PF04221 RelB antitoxin S96127_RS19460 PF00005 ABC transporter S96127_RS19465 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS19470 PF00296 Luciferase-like monooxygenase S96127_RS19475 PF09084 NMT1/THI5 like S96127_RS19480 PF03358 NADPH-dependent FMN reductase S96127_RS19485 PF01791 DeoC/LacD family aldolase S96127_RS19490 PF00294 pfkB family carbohydrate kinase S96127_RS19495 PF05025 RbsD / FucU transport protein family S96127_RS19500 PF02311 AraC-like ligand binding domain S96127_RS19500 PF12833 Helix-turn-helix domain S96127_RS19505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain S96127_RS19505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold S96127_RS19525 PF05593 RHS Repeat S96127_RS19525 PF03527 RHS protein S96127_RS19535 PF04717 Type VI secretion system, phage-baseplate injector S96127_RS19565 PF05593 RHS Repeat S96127_RS19565 PF03527 RHS protein S96127_RS19580 PF04717 Type VI secretion system, phage-baseplate injector S96127_RS19615 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS19615 PF17871 AAA lid domain S96127_RS19615 PF10431 C-terminal, D2-small domain, of ClpB protein S96127_RS19615 PF07724 AAA domain (Cdc48 subfamily) S96127_RS19625 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE S96127_RS19670 PF01266 FAD dependent oxidoreductase S96127_RS19670 PF16901 C-terminal domain of alpha-glycerophosphate oxidase S96127_RS19675 PF00343 Carbohydrate phosphorylase S96127_RS19680 PF08323 Starch synthase catalytic domain S96127_RS19680 PF00534 Glycosyl transferases group 1 S96127_RS19690 PF18390 Glycogen debranching enzyme C-terminal domain S96127_RS19690 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) S96127_RS19690 PF00128 Alpha amylase, catalytic domain S96127_RS19695 PF00128 Alpha amylase, catalytic domain S96127_RS19695 PF02806 Alpha amylase, C-terminal all-beta domain S96127_RS19695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) S96127_RS19700 PF06580 Histidine kinase S96127_RS19700 PF07694 5TMR of 5TMR-LYT S96127_RS19705 PF02369 Bacterial Ig-like domain (group 1) S96127_RS19705 PF09134 Invasin, domain 3 S96127_RS19705 PF07979 Intimin C-type lectin domain S96127_RS19705 PF11924 Inverse autotransporter, beta-domain S96127_RS19735 PF01118 Semialdehyde dehydrogenase, NAD binding domain S96127_RS19735 PF02774 Semialdehyde dehydrogenase, dimerisation domain S96127_RS19740 PF01914 MarC family integral membrane protein S96127_RS19755 PF01202 Shikimate kinase S96127_RS19760 PF02447 GntP family permease S96127_RS19765 PF00356 Bacterial regulatory proteins, lacI family S96127_RS19765 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family S96127_RS19770 PF02678 Pirin S96127_RS19770 PF17954 Quercetinase C-terminal cupin domain S96127_RS19780 PF00072 Response regulator receiver domain S96127_RS19780 PF00486 Transcriptional regulatory protein, C terminal S96127_RS19790 PF01116 Fructose-bisphosphate aldolase class-II S96127_RS19800 PF13407 Periplasmic binding protein domain S96127_RS19805 PF02653 Branched-chain amino acid transport system / permease component S96127_RS19810 PF00005 ABC transporter S96127_RS19815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS19815 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS19815 PF00072 Response regulator receiver domain S96127_RS19815 PF13188 PAS domain S96127_RS19815 PF08448 PAS fold S96127_RS19825 PF01384 Phosphate transporter family S96127_RS19835 PF10625 Universal stress protein B (UspB) S96127_RS19840 PF00582 Universal stress protein family S96127_RS19845 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain S96127_RS19845 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase S96127_RS19850 PF00413 Matrixin S96127_RS19850 PF08548 Peptidase M10 serralysin C terminal S96127_RS19850 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) S96127_RS19855 PF04445 Putative SAM-dependent methyltransferase S96127_RS19860 PF01432 Peptidase family M3 S96127_RS19865 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ S96127_RS19870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain S96127_RS19870 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS19875 PF05651 Putative sugar diacid recognition S96127_RS19875 PF17853 GGDEF-like domain S96127_RS19875 PF13556 PucR C-terminal helix-turn-helix domain S96127_RS19885 PF02447 GntP family permease S96127_RS19890 PF02595 Glycerate kinase family S96127_RS19915 PF03631 Virulence factor BrkB S96127_RS19920 PF02611 CDP-diacylglycerol pyrophosphatase S96127_RS19925 PF05170 AsmA family S96127_RS19930 PF00563 EAL domain S96127_RS19935 PF01361 Tautomerase enzyme S96127_RS19940 PF00294 pfkB family carbohydrate kinase S96127_RS19945 PF00675 Insulinase (Peptidase family M16) S96127_RS19945 PF05193 Peptidase M16 inactive domain S96127_RS19950 PF00375 Sodium:dicarboxylate symporter family S96127_RS19960 PF06917 Periplasmic pectate lyase S96127_RS19965 PF06178 Oligogalacturonate-specific porin protein (KdgM) S96127_RS19970 PF00990 Diguanylate cyclase, GGDEF domain S96127_RS19970 PF00672 HAMP domain S96127_RS19970 PF00563 EAL domain S96127_RS19970 PF17154 Gammaproteobacterial periplasmic sensor domain S96127_RS19975 PF01270 Glycosyl hydrolases family 8 S96127_RS19980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region S96127_RS19980 PF00005 ABC transporter S96127_RS19985 PF00005 ABC transporter S96127_RS19985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region S96127_RS19990 PF12911 N-terminal TM domain of oligopeptide transport permease C S96127_RS19990 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS20000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle S96127_RS20005 PF08479 POTRA domain, ShlB-type S96127_RS20005 PF17287 POTRA domain S96127_RS20005 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB S96127_RS20010 PF04829 Pre-toxin domain with VENN motif S96127_RS20010 PF13332 Hemagglutinin repeat S96127_RS20010 PF05594 Haemagluttinin repeat S96127_RS20010 PF05860 haemagglutination activity domain S96127_RS20020 PF07690 Major Facilitator Superfamily S96127_RS20025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS20025 PF05231 MASE1 S96127_RS20025 PF07730 Histidine kinase S96127_RS20030 PF01695 IstB-like ATP binding protein S96127_RS20035 PF00665 Integrase core domain S96127_RS20035 PF02796 Helix-turn-helix domain of resolvase S96127_RS20045 PF00072 Response regulator receiver domain S96127_RS20045 PF00196 Bacterial regulatory proteins, luxR family S96127_RS20050 PF00884 Sulfatase S96127_RS20050 PF08019 Phosphoethanolamine transferase EptA/EptB S96127_RS20055 PF12146 Serine aminopeptidase, S33 S96127_RS20060 PF00324 Amino acid permease S96127_RS20065 PF00221 Aromatic amino acid lyase S96127_RS20070 PF17391 Urocanase N-terminal domain S96127_RS20070 PF01175 Urocanase Rossmann-like domain S96127_RS20070 PF17392 Urocanase C-terminal domain S96127_RS20075 PF00291 Pyridoxal-phosphate dependent enzyme S96127_RS20080 PF00156 Phosphoribosyl transferase domain S96127_RS20095 PF01497 Periplasmic binding protein S96127_RS20100 PF01032 FecCD transport family S96127_RS20105 PF01032 FecCD transport family S96127_RS20110 PF00005 ABC transporter S96127_RS20145 PF04606 Ogr/Delta-like zinc finger S96127_RS20155 PF13356 Arm DNA-binding domain S96127_RS20155 PF00589 Phage integrase family S96127_RS20155 PF14659 Phage integrase, N-terminal SAM-like domain S96127_RS20165 PF12833 Helix-turn-helix domain S96127_RS20170 PF02653 Branched-chain amino acid transport system / permease component S96127_RS20175 PF00005 ABC transporter S96127_RS20180 PF13407 Periplasmic binding protein domain S96127_RS20190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain S96127_RS20190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain S96127_RS20200 PF02753 Pili assembly chaperone PapD, C-terminal domain S96127_RS20200 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain S96127_RS20210 PF00419 Fimbrial protein S96127_RS20215 PF01757 Acyltransferase family S96127_RS20230 PF07690 Major Facilitator Superfamily S96127_RS20265 PF12390 Selenocysteine synthase N terminal S96127_RS20265 PF03841 L-seryl-tRNA selenium transferase S96127_RS20270 PF04216 Protein involved in formate dehydrogenase formation S96127_RS20275 PF01292 Prokaryotic cytochrome b561 S96127_RS20280 PF09163 Formate dehydrogenase N, transmembrane S96127_RS20280 PF13247 4Fe-4S dicluster domain S96127_RS20290 PF02634 FdhD/NarQ family S96127_RS20295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain S96127_RS20295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain S96127_RS20300 PF00672 HAMP domain S96127_RS20300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain S96127_RS20300 PF02203 Tar ligand binding domain homologue S96127_RS20315 PF10928 Protein of unknown function (DUF2810) S96127_RS20320 PF05068 Mannitol repressor S96127_RS20325 PF08125 Mannitol dehydrogenase C-terminal domain S96127_RS20325 PF01232 Mannitol dehydrogenase Rossmann domain S96127_RS20330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 S96127_RS20330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit S96127_RS20330 PF02378 Phosphotransferase system, EIIC S96127_RS20335 PF11254 Protein of unknown function (DUF3053) S96127_RS20345 PF02092 Glycyl-tRNA synthetase beta subunit S96127_RS20345 PF05746 DALR anticodon binding domain S96127_RS20350 PF02091 Glycyl-tRNA synthetase alpha subunit S96127_RS20355 PF03352 Methyladenine glycosylase S96127_RS20365 PF13488 Glycine zipper S96127_RS20365 PF00691 OmpA family S96127_RS20375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain S96127_RS20375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain S96127_RS20380 PF00128 Alpha amylase, catalytic domain S96127_RS20390 PF00155 Aminotransferase class I and II S96127_RS20395 PF06826 Predicted Permease Membrane Region S96127_RS20395 PF02080 TrkA-C domain S96127_RS20400 PF00011 Hsp20/alpha crystallin family S96127_RS20405 PF00011 Hsp20/alpha crystallin family S96127_RS20410 PF07119 Protein of unknown function (DUF1375) S96127_RS20420 PF00291 Pyridoxal-phosphate dependent enzyme S96127_RS20420 PF13291 ACT domain S96127_RS20425 PF02423 Ornithine cyclodeaminase/mu-crystallin family S96127_RS20435 PF02219 Methylenetetrahydrofolate reductase S96127_RS20440 PF00696 Amino acid kinase family S96127_RS20440 PF03447 Homoserine dehydrogenase, NAD binding domain S96127_RS20440 PF00742 Homoserine dehydrogenase S96127_RS20450 PF01340 Met Apo-repressor, MetJ S96127_RS20455 PF05360 yiaA/B two helix domain S96127_RS20460 PF01197 Ribosomal protein L31 S96127_RS20465 PF18319 PriA DNA helicase Cys-rich region (CRR) domain S96127_RS20465 PF18074 Primosomal protein N C-terminal domain S96127_RS20465 PF00270 DEAD/DEAH box helicase S96127_RS20465 PF00271 Helicase conserved C-terminal domain S96127_RS20465 PF17764 3′ DNA-binding domain (3′BD) S96127_RS20470 PF00356 Bacterial regulatory proteins, lacI family S96127_RS20475 PF05036 Sporulation related domain S96127_RS20480 PF00227 Proteasome subunit S96127_RS20485 PF10431 C-terminal, D2-small domain, of ClpB protein S96127_RS20485 PF07724 AAA domain (Cdc48 subfamily) S96127_RS20485 PF00004 ATPase family associated with various cellular activities (AAA) S96127_RS20490 PF01040 UbiA prenyltransferase family S96127_RS20495 PF03737 Aldolase/RraA S96127_RS20510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion S96127_RS20510 PF00529 HlyD membrane-fusion protein of T1SS S96127_RS20515 PF03412 Peptidase C39 family S96127_RS20515 PF00005 ABC transporter S96127_RS20515 PF00664 ABC transporter transmembrane region S96127_RS20525 PF06005 Cell division protein ZapB S96127_RS20530 PF00230 Major intrinsic protein S96127_RS20535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain S96127_RS20535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain S96127_RS20540 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded S96127_RS20545 PF00175 Oxidoreductase NAD-binding domain S96127_RS20545 PF00970 Oxidoreductase FAD-binding domain S96127_RS20550 PF05656 Protein of unknown function (DUF805) S96127_RS20555 PF07305 Protein of unknown function (DUF1454) S96127_RS20560 PF00121 Triosephosphate isomerase S96127_RS20565 PF03466 LysR substrate binding domain S96127_RS20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family S96127_RS20570 PF02585 GlcNAc-PI de-N-acetylase S96127_RS20575 PF03737 Aldolase/RraA S96127_RS20580 PF00939 Sodium:sulfate symporter transmembrane region S96127_RS20595 PF00365 Phosphofructokinase S96127_RS20600 PF16916 Dimerisation domain of Zinc Transporter S96127_RS20600 PF01545 Cation efflux family S96127_RS20605 PF04754 Putative transposase, YhgA-like S96127_RS20615 PF07813 LTXXQ motif family protein S96127_RS20620 PF00486 Transcriptional regulatory protein, C terminal S96127_RS20620 PF00072 Response regulator receiver domain S96127_RS20625 PF00672 HAMP domain S96127_RS20625 PF16527 Two-component sensor protein CpxA, periplasmic domain S96127_RS20625 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS20625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS20630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain S96127_RS20630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain S96127_RS20630 PF12833 Helix-turn-helix domain S96127_RS20630 PF02805 Metal binding domain of Ada S96127_RS20635 PF00588 SpoU rRNA Methylase family S96127_RS20640 PF06426 Serine acetyltransferase, N-terminal S96127_RS20640 PF00132 Bacterial transferase hexapeptide (six repeats) S96127_RS20645 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus S96127_RS20645 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus S96127_RS20650 PF02556 Preprotein translocase subunit SecB S96127_RS20655 PF00462 Glutaredoxin S96127_RS20660 PF00581 Rhodanese-like domain S96127_RS20665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) S96127_RS20665 PF01676 Metalloenzyme superfamily S96127_RS20670 PF01551 Peptidase family M23 S96127_RS20680 PF08240 Alcohol dehydrogenase GroES-like domain S96127_RS20680 PF00107 Zinc-binding dehydrogenase S96127_RS20685 PF00155 Aminotransferase class I and II S96127_RS20690 PF01370 NAD dependent epimerase/dehydratase family S96127_RS20695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) S96127_RS20700 PF01075 Glycosyltransferase family 9 (heptosyltransferase) S96127_RS20705 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) S96127_RS20710 PF00535 Glycosyl transferase family 2 S96127_RS20715 PF01467 Cytidylyltransferase-like S96127_RS20720 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain S96127_RS20720 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain S96127_RS20720 PF06827 Zinc finger found in FPG and IleRS S96127_RS20725 PF00471 Ribosomal protein L33 S96127_RS20730 PF00830 Ribosomal L28 family S96127_RS20735 PF04002 RadC-like JAB domain S96127_RS20740 PF04127 DNA / pantothenate metabolism flavoprotein S96127_RS20740 PF02441 Flavoprotein S96127_RS20745 PF00692 dUTPase S96127_RS20750 PF00440 Bacterial regulatory proteins, tetR family S96127_RS20755 PF00156 Phosphoribosyl transferase domain S96127_RS20760 PF01138 3' exoribonuclease family, domain 1 S96127_RS20760 PF03725 3' exoribonuclease family, domain 2 S96127_RS20765 PF08340 Domain of unknown function (DUF1732) S96127_RS20765 PF03755 YicC-like family, N-terminal region S96127_RS20770 PF03458 UPF0126 domain S96127_RS20775 PF01653 NAD-dependent DNA ligase adenylation domain S96127_RS20775 PF03120 NAD-dependent DNA ligase OB-fold domain S96127_RS20780 PF00625 Guanylate kinase S96127_RS20785 PF01192 RNA polymerase Rpb6 S96127_RS20790 PF13291 ACT domain S96127_RS20790 PF04607 Region found in RelA / SpoT proteins S96127_RS20790 PF02824 TGS domain S96127_RS20795 PF00588 SpoU rRNA Methylase family S96127_RS20795 PF12105 SpoU, rRNA methylase, C-terminal S96127_RS20800 PF17191 RecG wedge domain S96127_RS20800 PF00270 DEAD/DEAH box helicase S96127_RS20800 PF00271 Helicase conserved C-terminal domain S96127_RS20810 PF03616 Sodium/glutamate symporter S96127_RS20815 PF00860 Permease family S96127_RS20820 PF05170 AsmA family S96127_RS20825 PF09500 Putative thioesterase (yiiD_Cterm) S96127_RS20825 PF00583 Acetyltransferase (GNAT) family S96127_RS20830 PF02796 Helix-turn-helix domain of resolvase S96127_RS20830 PF00665 Integrase core domain S96127_RS20835 PF01695 IstB-like ATP binding protein S96127_RS20840 PF00132 Bacterial transferase hexapeptide (six repeats) S96127_RS20845 PF01488 Shikimate / quinate 5-dehydrogenase S96127_RS20845 PF08501 Shikimate dehydrogenase substrate binding domain S96127_RS20845 PF18317 Shikimate 5'-dehydrogenase C-terminal domain S96127_RS20850 PF01300 Telomere recombination S96127_RS20855 PF01396 Topoisomerase DNA binding C4 zinc finger S96127_RS20860 PF04361 Protein of unknown function (DUF494) S96127_RS20865 PF02481 DNA recombination-mediator protein A S96127_RS20865 PF17782 DprA winged helix domain S96127_RS20870 PF01327 Polypeptide deformylase S96127_RS20875 PF00551 Formyl transferase S96127_RS20875 PF02911 Formyl transferase, C-terminal domain S96127_RS20880 PF01189 16S rRNA methyltransferase RsmB/F S96127_RS20880 PF01029 NusB family S96127_RS20885 PF02254 TrkA-N domain S96127_RS20885 PF02080 TrkA-C domain S96127_RS20890 PF01741 Large-conductance mechanosensitive channel, MscL S96127_RS20895 PF03889 Alternative ribosome-rescue factor A S96127_RS20900 PF13411 MerR HTH family regulatory protein S96127_RS20905 PF01196 Ribosomal protein L17 S96127_RS20910 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain S96127_RS20910 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain S96127_RS20910 PF01000 RNA polymerase Rpb3/RpoA insert domain S96127_RS20915 PF00163 Ribosomal protein S4/S9 N-terminal domain S96127_RS20915 PF01479 S4 domain S96127_RS20920 PF00411 Ribosomal protein S11 S96127_RS20925 PF00416 Ribosomal protein S13/S18 S96127_RS20930 PF00444 Ribosomal protein L36 S96127_RS20935 PF00344 SecY translocase S96127_RS20940 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A S96127_RS20945 PF00327 Ribosomal protein L30p/L7e S96127_RS20950 PF00333 Ribosomal protein S5, N-terminal domain S96127_RS20950 PF03719 Ribosomal protein S5, C-terminal domain S96127_RS20955 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast S96127_RS20960 PF00347 Ribosomal protein L6 S96127_RS20965 PF00410 Ribosomal protein S8 S96127_RS20970 PF00253 Ribosomal protein S14p/S29e S96127_RS20975 PF00673 ribosomal L5P family C-terminus S96127_RS20975 PF00281 Ribosomal protein L5 S96127_RS20980 PF00467 KOW motif S96127_RS20980 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 S96127_RS20985 PF00238 Ribosomal protein L14p/L23e S96127_RS20990 PF00366 Ribosomal protein S17 S96127_RS20995 PF00831 Ribosomal L29 protein S96127_RS21000 PF00252 Ribosomal protein L16p/L10e S96127_RS21005 PF00189 Ribosomal protein S3, C-terminal domain S96127_RS21005 PF07650 KH domain S96127_RS21010 PF00237 Ribosomal protein L22p/L17e S96127_RS21015 PF00203 Ribosomal protein S19 S96127_RS21020 PF00181 Ribosomal Proteins L2, RNA binding domain S96127_RS21020 PF03947 Ribosomal Proteins L2, C-terminal domain S96127_RS21025 PF00276 Ribosomal protein L23 S96127_RS21030 PF00573 Ribosomal protein L4/L1 family S96127_RS21035 PF00297 Ribosomal protein L3 S96127_RS21040 PF00338 Ribosomal protein S10p/S20e S96127_RS21045 PF00210 Ferritin-like domain S96127_RS21050 PF04324 BFD-like [2Fe-2S] binding domain S96127_RS21055 PF01797 Transposase IS200 like S96127_RS21060 PF03143 Elongation factor Tu C-terminal domain S96127_RS21060 PF00009 Elongation factor Tu GTP binding domain S96127_RS21060 PF03144 Elongation factor Tu domain 2 S96127_RS21065 PF14492 Elongation Factor G, domain II S96127_RS21065 PF00009 Elongation factor Tu GTP binding domain S96127_RS21065 PF03764 Elongation factor G, domain IV S96127_RS21065 PF00679 Elongation factor G C-terminus S96127_RS21065 PF03144 Elongation factor Tu domain 2 S96127_RS21070 PF00177 Ribosomal protein S7p/S5e S96127_RS21075 PF00164 Ribosomal protein S12/S23 S96127_RS21080 PF04077 DsrH like protein S96127_RS21085 PF02635 DsrE/DsrF-like family S96127_RS21090 PF02635 DsrE/DsrF-like family S96127_RS21095 PF08348 YheO-like PAS domain S96127_RS21095 PF13309 HTH domain S96127_RS21100 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase S96127_RS21100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase S96127_RS21105 PF04102 SlyX S96127_RS21110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase S96127_RS21115 PF09526 Probable metal-binding protein (DUF2387) S96127_RS21120 PF02254 TrkA-N domain S96127_RS21120 PF00999 Sodium/hydrogen exchanger family S96127_RS21125 PF02525 Flavodoxin-like fold S96127_RS21135 PF00535 Glycosyl transferase family 2 S96127_RS21145 PF02668 Taurine catabolism dioxygenase TauD, TfdA family S96127_RS21150 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS21155 PF00005 ABC transporter S96127_RS21160 PF04069 Substrate binding domain of ABC-type glycine betaine transport system S96127_RS21165 PF01810 LysE type translocator S96127_RS21170 PF00561 alpha/beta hydrolase fold S96127_RS21175 PF06794 Uncharacterised protein family (UPF0270) S96127_RS21180 PF00485 Phosphoribulokinase / Uridine kinase family S96127_RS21190 PF02566 OsmC-like protein S96127_RS21195 PF00027 Cyclic nucleotide-binding domain S96127_RS21195 PF13545 Crp-like helix-turn-helix domain S96127_RS21200 PF12805 FUSC-like inner membrane protein yccS S96127_RS21205 PF00202 Aminotransferase class-III S96127_RS21210 PF00117 Glutamine amidotransferase class-I S96127_RS21215 PF05872 Bacterial protein of unknown function (DUF853) S96127_RS21220 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD S96127_RS21225 PF11975 Family 4 glycosyl hydrolase C-terminal domain S96127_RS21225 PF02056 Family 4 glycosyl hydrolase S96127_RS21230 PF00356 Bacterial regulatory proteins, lacI family S96127_RS21240 PF07690 Major Facilitator Superfamily S96127_RS21245 PF07969 Amidohydrolase family S96127_RS21250 PF04324 BFD-like [2Fe-2S] binding domain S96127_RS21250 PF18267 Rubredoxin NAD+ reductase C-terminal domain S96127_RS21250 PF01077 Nitrite and sulphite reductase 4Fe-4S domain S96127_RS21250 PF07992 Pyridine nucleotide-disulphide oxidoreductase S96127_RS21250 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain S96127_RS21255 PF13806 Rieske-like [2Fe-2S] domain S96127_RS21260 PF01226 Formate/nitrite transporter S96127_RS21265 PF10414 Sirohaem synthase dimerisation region S96127_RS21265 PF14824 Sirohaem biosynthesis protein central S96127_RS21265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases S96127_RS21270 PF00579 tRNA synthetases class I (W and Y) S96127_RS21275 PF13419 Haloacid dehalogenase-like hydrolase S96127_RS21280 PF00834 Ribulose-phosphate 3 epimerase family S96127_RS21285 PF02086 D12 class N6 adenine-specific DNA methyltransferase S96127_RS21290 PF05036 Sporulation related domain S96127_RS21295 PF01761 3-dehydroquinate synthase S96127_RS21300 PF01202 Shikimate kinase S96127_RS21305 PF00263 Bacterial type II and III secretion system protein S96127_RS21305 PF03958 Bacterial type II/III secretion system short domain S96127_RS21330 PF17092 Penicillin-binding protein OB-like domain S96127_RS21330 PF00912 Transglycosylase S96127_RS21330 PF00905 Penicillin binding protein transpeptidase domain S96127_RS21335 PF00293 NUDIX domain S96127_RS21340 PF07095 Intracellular growth attenuator protein IgaA S96127_RS21345 PF13419 Haloacid dehalogenase-like hydrolase S96127_RS21350 PF01479 S4 domain S96127_RS21355 PF01430 Hsp33 protein S96127_RS21360 PF01293 Phosphoenolpyruvate carboxykinase S96127_RS21365 PF00672 HAMP domain S96127_RS21365 PF00512 His Kinase A (phospho-acceptor) domain S96127_RS21365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase S96127_RS21370 PF00072 Response regulator receiver domain S96127_RS21370 PF00486 Transcriptional regulatory protein, C terminal S96127_RS21375 PF03449 Transcription elongation factor, N-terminal S96127_RS21375 PF01272 Transcription elongation factor, GreA/GreB, C-term S96127_RS21380 PF16921 Tex protein YqgF-like domain S96127_RS21380 PF09371 Tex-like protein N-terminal domain S96127_RS21380 PF00575 S1 RNA binding domain S96127_RS21380 PF17674 HHH domain S96127_RS21385 PF04023 FeoA domain S96127_RS21390 PF07670 Nucleoside recognition S96127_RS21390 PF02421 Ferrous iron transport protein B S96127_RS21390 PF17910 FeoB cytosolic helical domain S96127_RS21390 PF07664 Ferrous iron transport protein B C terminus S96127_RS21395 PF09012 FeoC like transcriptional regulator S96127_RS21405 PF07338 Protein of unknown function (DUF1471) S96127_RS21410 PF00561 alpha/beta hydrolase fold S96127_RS21415 PF00156 Phosphoribosyl transferase domain S96127_RS21420 PF01521 Iron-sulphur cluster biosynthesis S96127_RS21420 PF01106 NifU-like domain S96127_RS21425 PF02446 4-alpha-glucanotransferase S96127_RS21430 PF00343 Carbohydrate phosphorylase S96127_RS21435 PF00343 Carbohydrate phosphorylase S96127_RS21445 PF01695 IstB-like ATP binding protein S96127_RS21450 PF02796 Helix-turn-helix domain of resolvase S96127_RS21450 PF00665 Integrase core domain S96127_RS21460 PF00581 Rhodanese-like domain S96127_RS21465 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease S96127_RS21465 PF01694 Rhomboid family S96127_RS21470 PF08220 DeoR-like helix-turn-helix domain S96127_RS21470 PF00455 DeoR C terminal sensor domain S96127_RS21490 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath S96127_RS21500 PF05638 Type VI secretion system effector, Hcp S96127_RS21510 PF07148 Maltose operon periplasmic protein precursor (MalM) S96127_RS21515 PF02264 LamB porin S96127_RS21520 PF17912 MalK OB fold domain S96127_RS21520 PF00005 ABC transporter S96127_RS21530 PF01547 Bacterial extracellular solute-binding protein S96127_RS21535 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS21535 PF14785 Maltose transport system permease protein MalF P2 domain S96127_RS21540 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS21545 PF06146 Phosphate-starvation-inducible E S96127_RS21550 PF00342 Phosphoglucose isomerase S96127_RS21555 PF01842 ACT domain S96127_RS21555 PF00696 Amino acid kinase family S96127_RS21565 PF05860 haemagglutination activity domain S96127_RS21565 PF13332 Hemagglutinin repeat S96127_RS21570 PF02965 Vitamin B12 dependent methionine synthase, activation domain S96127_RS21570 PF02310 B12 binding domain S96127_RS21570 PF02607 B12 binding domain S96127_RS21570 PF00809 Pterin binding enzyme S96127_RS21570 PF02574 Homocysteine S-methyltransferase S96127_RS21580 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) S96127_RS21585 PF00463 Isocitrate lyase family S96127_RS21590 PF01274 Malate synthase S96127_RS21595 PF04204 Homoserine O-succinyltransferase S96127_RS21630 PF07729 FCD domain S96127_RS21630 PF00392 Bacterial regulatory proteins, gntR family S96127_RS21635 PF07690 Major Facilitator Superfamily S96127_RS21650 PF00294 pfkB family carbohydrate kinase S96127_RS21655 PF05025 RbsD / FucU transport protein family S96127_RS21660 PF02705 K+ potassium transporter S96127_RS21665 PF12592 Protein of unknown function (DUF3763) S96127_RS21665 PF17868 AAA lid domain S96127_RS21665 PF07728 AAA domain (dynein-related subfamily) S96127_RS21670 PF05762 VWA domain containing CoxE-like protein S96127_RS21675 PF03590 Aspartate-ammonia ligase S96127_RS21680 PF01037 Lrp/AsnC ligand binding domain S96127_RS21685 PF00258 Flavodoxin S96127_RS21690 PF13932 GidA associated domain S96127_RS21690 PF01134 Glucose inhibited division protein A S96127_RS21695 PF02527 rRNA small subunit methyltransferase G S96127_RS21700 PF03899 ATP synthase I chain S96127_RS21705 PF00119 ATP synthase A chain S96127_RS21710 PF00137 ATP synthase subunit C S96127_RS21715 PF00430 ATP synthase B/B' CF(0) S96127_RS21720 PF00213 ATP synthase delta (OSCP) subunit S96127_RS21725 PF02874 ATP synthase alpha/beta family, beta-barrel domain S96127_RS21725 PF00306 ATP synthase alpha/beta chain, C terminal domain S96127_RS21725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain S96127_RS21730 PF00231 ATP synthase S96127_RS21735 PF02874 ATP synthase alpha/beta family, beta-barrel domain S96127_RS21735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain S96127_RS21740 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain S96127_RS21740 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain S96127_RS21745 PF00132 Bacterial transferase hexapeptide (six repeats) S96127_RS21745 PF12804 MobA-like NTP transferase domain S96127_RS21750 PF01380 SIS domain S96127_RS21755 PF12849 PBP superfamily domain S96127_RS21760 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS21765 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS21770 PF00005 ABC transporter S96127_RS21775 PF01895 PhoU domain S96127_RS21785 PF00497 Bacterial extracellular solute-binding proteins, family 3 S96127_RS21790 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS21795 PF00528 Binding-protein-dependent transport system inner membrane component S96127_RS21800 PF13419 Haloacid dehalogenase-like hydrolase S96127_RS21810 PF00860 Permease family S96127_RS21830 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase S96127_RS21830 PF07055 Enoyl reductase FAD binding domain S96127_RS21830 PF12241 Trans-2-enoyl-CoA reductase catalytic region S96127_RS21835 PF12631 MnmE helical domain S96127_RS21835 PF10396 GTP-binding protein TrmE N-terminus S96127_RS21835 PF01926 50S ribosome-binding GTPase S96127_RS21840 PF02096 60Kd inner membrane protein S96127_RS21840 PF14849 YidC periplasmic domain S96127_RS21845 PF01809 Putative membrane protein insertion efficiency factor S96127_RS21850 PF00825 Ribonuclease P S96127_RS21855 PF00468 Ribosomal protein L34